Query 027424
Match_columns 223
No_of_seqs 186 out of 1302
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 16:12:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027424.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027424hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ri6_A O-acetylhomoserine sulf 100.0 6.4E-54 2.2E-58 392.7 22.3 218 1-219 192-430 (430)
2 3nmy_A Xometc, cystathionine g 100.0 1.3E-52 4.6E-57 380.1 21.8 219 1-219 177-397 (400)
3 3ndn_A O-succinylhomoserine su 100.0 1.6E-49 5.6E-54 361.3 20.7 219 1-219 191-414 (414)
4 1qgn_A Protein (cystathionine 100.0 4.2E-46 1.4E-50 342.5 23.7 220 1-221 225-445 (445)
5 3qhx_A Cystathionine gamma-syn 100.0 3.5E-44 1.2E-48 322.9 23.1 216 1-219 176-392 (392)
6 3cog_A Cystathionine gamma-lya 100.0 1.5E-42 5.2E-47 313.7 26.2 220 1-220 176-397 (403)
7 2fq6_A Cystathionine beta-lyas 100.0 6.8E-43 2.3E-47 318.1 23.7 216 1-221 192-414 (415)
8 3acz_A Methionine gamma-lyase; 100.0 4.7E-42 1.6E-46 308.2 25.3 220 1-220 169-388 (389)
9 2ctz_A O-acetyl-L-homoserine s 100.0 1.7E-40 5.9E-45 301.3 21.6 219 1-219 169-421 (421)
10 1gc0_A Methionine gamma-lyase; 100.0 3.4E-38 1.2E-42 283.3 19.8 221 1-221 175-397 (398)
11 1n8p_A Cystathionine gamma-lya 100.0 8.9E-38 3.1E-42 281.4 20.0 221 1-221 163-391 (393)
12 1e5e_A MGL, methionine gamma-l 100.0 4.7E-37 1.6E-41 277.4 22.0 220 1-220 172-394 (404)
13 2cb1_A O-acetyl homoserine sul 100.0 8.7E-37 3E-41 275.6 23.5 220 1-221 165-412 (412)
14 1ibj_A CBL, cystathionine beta 100.0 5.5E-36 1.9E-40 276.2 22.6 223 1-223 242-464 (464)
15 2rfv_A Methionine gamma-lyase; 100.0 3.6E-32 1.2E-36 243.6 22.8 221 1-221 174-396 (398)
16 1pff_A Methionine gamma-lyase; 100.0 7.2E-31 2.5E-35 228.4 19.3 221 1-221 108-330 (331)
17 1cs1_A CGS, protein (cystathio 100.0 6.7E-30 2.3E-34 227.7 25.0 221 1-221 162-383 (386)
18 3i16_A Aluminum resistance pro 99.9 1.3E-24 4.5E-29 198.6 12.9 202 1-221 205-425 (427)
19 3hvy_A Cystathionine beta-lyas 99.9 1.8E-23 6.1E-28 191.1 14.5 202 1-221 205-425 (427)
20 3jzl_A Putative cystathionine 99.9 2.1E-22 7.3E-27 182.9 13.2 199 1-220 188-407 (409)
21 3ht4_A Aluminum resistance pro 99.7 4.3E-17 1.5E-21 148.8 10.8 148 1-163 194-348 (431)
22 3ju7_A Putative PLP-dependent 99.3 1.9E-11 6.5E-16 108.9 11.9 107 1-111 151-274 (377)
23 3ffr_A Phosphoserine aminotran 99.2 4.7E-10 1.6E-14 97.0 17.9 178 1-220 155-359 (362)
24 3ftb_A Histidinol-phosphate am 99.2 1.3E-10 4.4E-15 101.0 14.2 175 1-220 172-360 (361)
25 3hbx_A GAD 1, glutamate decarb 99.2 6.7E-12 2.3E-16 116.0 6.2 178 2-220 228-443 (502)
26 2dr1_A PH1308 protein, 386AA l 99.2 2.4E-10 8.3E-15 99.8 13.5 176 1-220 171-378 (386)
27 1fc4_A 2-amino-3-ketobutyrate 99.2 7.6E-10 2.6E-14 97.7 15.7 178 1-221 202-397 (401)
28 3nyt_A Aminotransferase WBPE; 99.2 6.8E-10 2.3E-14 97.4 15.2 198 1-220 145-359 (367)
29 3zrp_A Serine-pyruvate aminotr 99.2 3.3E-10 1.1E-14 98.8 12.9 178 1-220 152-362 (384)
30 3op7_A Aminotransferase class 99.1 2.4E-10 8.2E-15 100.1 11.6 109 1-112 182-299 (375)
31 1t3i_A Probable cysteine desul 99.1 6.3E-10 2.1E-14 98.3 14.1 186 1-220 194-412 (420)
32 3dzz_A Putative pyridoxal 5'-p 99.1 5E-10 1.7E-14 98.1 13.2 110 1-111 188-313 (391)
33 3euc_A Histidinol-phosphate am 99.1 4.4E-10 1.5E-14 98.1 12.7 172 1-219 185-366 (367)
34 3frk_A QDTB; aminotransferase, 99.1 1.3E-09 4.3E-14 95.7 15.2 199 1-221 146-364 (373)
35 1lc5_A COBD, L-threonine-O-3-p 99.1 4.3E-10 1.5E-14 98.3 12.1 174 1-220 174-359 (364)
36 4hvk_A Probable cysteine desul 99.1 1E-10 3.5E-15 101.6 8.0 191 1-220 163-372 (382)
37 3tqx_A 2-amino-3-ketobutyrate 99.1 7.9E-10 2.7E-14 97.1 13.8 179 1-222 200-397 (399)
38 3lvm_A Cysteine desulfurase; s 99.1 2.5E-10 8.7E-15 101.3 10.4 191 1-220 188-398 (423)
39 2w8t_A SPT, serine palmitoyltr 99.1 1E-09 3.4E-14 98.6 14.2 178 1-220 219-414 (427)
40 3pj0_A LMO0305 protein; struct 99.1 4.2E-10 1.5E-14 97.8 11.3 108 1-112 166-281 (359)
41 3fkd_A L-threonine-O-3-phospha 99.1 3.4E-10 1.2E-14 98.3 9.8 170 7-220 161-341 (350)
42 2oga_A Transaminase; PLP-depen 99.1 1.6E-09 5.5E-14 96.2 14.2 109 1-111 173-297 (399)
43 4dq6_A Putative pyridoxal phos 99.1 1.3E-09 4.3E-14 95.5 13.1 110 1-111 192-317 (391)
44 3lws_A Aromatic amino acid bet 99.1 4.8E-10 1.6E-14 97.5 10.3 108 1-112 164-279 (357)
45 3ffh_A Histidinol-phosphate am 99.1 2.8E-09 9.6E-14 92.8 14.7 165 6-218 187-363 (363)
46 1bs0_A Protein (8-amino-7-oxon 99.1 3E-09 1E-13 93.3 14.8 175 1-219 193-381 (384)
47 2o1b_A Aminotransferase, class 99.1 2.2E-09 7.4E-14 95.6 14.0 106 1-108 209-326 (404)
48 3fdb_A Beta C-S lyase, putativ 99.1 1.4E-09 4.8E-14 95.0 12.4 110 1-111 178-301 (377)
49 3get_A Histidinol-phosphate am 99.1 9.4E-10 3.2E-14 95.9 11.1 168 4-219 183-365 (365)
50 2aeu_A Hypothetical protein MJ 99.0 8E-10 2.8E-14 98.0 10.6 103 1-107 167-279 (374)
51 3cai_A Possible aminotransfera 99.0 1E-09 3.5E-14 96.9 11.1 182 1-220 190-404 (406)
52 3uwc_A Nucleotide-sugar aminot 99.0 1.6E-09 5.5E-14 94.6 12.2 198 1-220 147-370 (374)
53 3vax_A Putative uncharacterize 99.0 3.8E-10 1.3E-14 99.3 7.9 190 1-219 184-398 (400)
54 1jg8_A L-ALLO-threonine aldola 99.0 1.9E-10 6.5E-15 99.5 5.5 171 1-219 161-344 (347)
55 3kax_A Aminotransferase, class 99.0 2.2E-09 7.6E-14 93.7 12.3 110 1-111 184-309 (383)
56 2a7v_A Serine hydroxymethyltra 99.0 9E-09 3.1E-13 95.3 16.5 177 1-219 226-439 (490)
57 3f9t_A TDC, L-tyrosine decarbo 99.0 7.6E-10 2.6E-14 96.5 8.8 170 1-219 196-396 (397)
58 3dyd_A Tyrosine aminotransfera 99.0 2.1E-08 7.1E-13 90.0 18.3 115 1-117 219-351 (427)
59 1xi9_A Putative transaminase; 99.0 1.4E-09 4.6E-14 96.6 10.4 110 1-111 202-326 (406)
60 2fnu_A Aminotransferase; prote 99.0 2.8E-09 9.5E-14 92.8 12.2 108 1-111 143-270 (375)
61 1rv3_A Serine hydroxymethyltra 99.0 1.3E-08 4.4E-13 93.5 17.0 179 1-220 216-430 (483)
62 1kmj_A Selenocysteine lyase; p 99.0 1.6E-08 5.6E-13 88.6 16.9 182 1-220 189-404 (406)
63 2bkw_A Alanine-glyoxylate amin 99.0 1.6E-08 5.5E-13 88.1 16.2 180 1-221 162-384 (385)
64 2e7j_A SEP-tRNA:Cys-tRNA synth 99.0 6.1E-10 2.1E-14 96.9 7.0 177 1-220 172-369 (371)
65 3dr4_A Putative perosamine syn 99.0 6.3E-09 2.2E-13 91.7 13.5 198 1-220 166-388 (391)
66 3ou5_A Serine hydroxymethyltra 99.0 1.8E-09 6.1E-14 99.0 10.1 184 1-219 226-439 (490)
67 1elu_A L-cysteine/L-cystine C- 99.0 4.4E-09 1.5E-13 91.9 12.0 169 4-221 186-388 (390)
68 1c7n_A Cystalysin; transferase 99.0 4.5E-09 1.5E-13 92.7 12.1 110 1-111 192-317 (399)
69 1mdo_A ARNB aminotransferase; 99.0 1.5E-09 5E-14 95.5 8.6 106 1-109 149-281 (393)
70 3l8a_A METC, putative aminotra 99.0 4.2E-09 1.4E-13 94.1 11.7 111 1-112 222-347 (421)
71 3a2b_A Serine palmitoyltransfe 99.0 1.6E-08 5.6E-13 89.1 15.3 177 1-221 198-392 (398)
72 3kki_A CAI-1 autoinducer synth 99.0 8.2E-09 2.8E-13 91.7 13.4 173 1-221 211-404 (409)
73 2dkj_A Serine hydroxymethyltra 99.0 1.9E-08 6.6E-13 88.5 15.6 179 1-220 186-387 (407)
74 1w23_A Phosphoserine aminotran 98.9 9.5E-09 3.3E-13 89.1 13.2 137 1-156 161-316 (360)
75 3nra_A Aspartate aminotransfer 98.9 1.9E-09 6.4E-14 95.1 8.4 109 1-111 207-329 (407)
76 3ly1_A Putative histidinol-pho 98.9 4.7E-09 1.6E-13 91.0 10.6 168 4-221 171-352 (354)
77 3kgw_A Alanine-glyoxylate amin 98.9 7.4E-09 2.5E-13 90.4 11.6 178 1-221 173-388 (393)
78 2dou_A Probable N-succinyldiam 98.9 4.7E-09 1.6E-13 91.9 10.2 106 1-108 186-303 (376)
79 4eb5_A Probable cysteine desul 98.9 6.6E-09 2.3E-13 90.5 10.9 190 1-219 163-371 (382)
80 1m32_A 2-aminoethylphosphonate 98.9 3.6E-09 1.2E-13 91.4 8.8 105 1-108 156-285 (366)
81 1b9h_A AHBA synthase, protein 98.9 6E-09 2.1E-13 91.6 10.3 141 1-156 148-312 (388)
82 3b8x_A WBDK, pyridoxamine 5-ph 98.9 5E-08 1.7E-12 86.0 16.2 197 1-218 150-389 (390)
83 2c81_A Glutamine-2-deoxy-scyll 98.9 4.4E-08 1.5E-12 87.3 15.8 108 1-111 152-289 (418)
84 2x5f_A Aspartate_tyrosine_phen 98.9 1.5E-08 5.1E-13 90.5 12.8 170 2-220 218-428 (430)
85 3mc6_A Sphingosine-1-phosphate 98.9 1.8E-08 6.2E-13 92.0 13.4 172 1-220 231-436 (497)
86 1gd9_A Aspartate aminotransfer 98.9 6.3E-09 2.1E-13 91.4 9.9 106 1-108 188-308 (389)
87 3ezs_A Aminotransferase ASPB; 98.9 8.2E-08 2.8E-12 83.7 16.9 104 1-106 182-301 (376)
88 1j32_A Aspartate aminotransfer 98.9 7E-09 2.4E-13 91.1 10.0 109 1-111 191-313 (388)
89 2x5d_A Probable aminotransfera 98.9 1.3E-08 4.6E-13 90.3 11.7 106 1-108 200-318 (412)
90 2z61_A Probable aspartate amin 98.9 8.9E-09 3E-13 90.0 10.3 106 1-108 178-296 (370)
91 3g0t_A Putative aminotransfera 98.9 3.5E-08 1.2E-12 87.9 14.4 180 1-219 210-435 (437)
92 2dgk_A GAD-beta, GADB, glutama 98.9 6.8E-09 2.3E-13 93.9 9.9 180 5-219 222-432 (452)
93 3hdo_A Histidinol-phosphate am 98.9 1E-08 3.6E-13 89.3 10.6 106 1-111 174-286 (360)
94 2gb3_A Aspartate aminotransfer 98.9 5.7E-08 1.9E-12 86.3 15.6 106 1-108 202-317 (409)
95 3isl_A Purine catabolism prote 98.9 2.8E-08 9.5E-13 87.6 13.3 180 1-221 161-390 (416)
96 2vi8_A Serine hydroxymethyltra 98.9 4.9E-08 1.7E-12 85.9 14.8 179 1-221 186-387 (405)
97 1vp4_A Aminotransferase, putat 98.9 3.9E-08 1.3E-12 87.9 14.1 175 1-219 216-416 (425)
98 3jtx_A Aminotransferase; NP_28 98.9 3E-07 1E-11 80.7 19.6 106 1-108 196-317 (396)
99 3e9k_A Kynureninase; kynurenin 98.8 4E-09 1.4E-13 95.5 7.5 176 1-222 239-462 (465)
100 1iug_A Putative aspartate amin 98.8 4.1E-08 1.4E-12 84.5 13.5 176 1-219 146-346 (352)
101 2zyj_A Alpha-aminodipate amino 98.8 1.5E-08 5E-13 89.5 10.9 175 1-219 191-391 (397)
102 1yiz_A Kynurenine aminotransfe 98.8 2.7E-08 9.4E-13 88.7 12.6 106 1-108 210-335 (429)
103 3h14_A Aminotransferase, class 98.8 3.2E-08 1.1E-12 87.1 12.7 108 1-110 189-304 (391)
104 1fg7_A Histidinol phosphate am 98.8 8.9E-08 3E-12 83.7 15.4 106 2-112 175-290 (356)
105 3ruy_A Ornithine aminotransfer 98.8 7.9E-09 2.7E-13 91.0 8.5 167 1-218 211-391 (392)
106 2zc0_A Alanine glyoxylate tran 98.8 3.6E-08 1.2E-12 87.1 12.7 178 1-220 203-403 (407)
107 3fvs_A Kynurenine--oxoglutarat 98.8 1.5E-07 5E-12 83.5 16.7 113 1-117 202-334 (422)
108 1vjo_A Alanine--glyoxylate ami 98.8 3.5E-08 1.2E-12 86.6 12.4 105 1-108 184-314 (393)
109 1o4s_A Aspartate aminotransfer 98.8 1.1E-08 3.9E-13 90.2 9.2 106 1-108 202-316 (389)
110 1d2f_A MALY protein; aminotran 98.8 3.4E-08 1.2E-12 86.8 12.1 109 1-111 190-313 (390)
111 2r2n_A Kynurenine/alpha-aminoa 98.8 6.4E-08 2.2E-12 86.6 14.0 114 1-117 219-350 (425)
112 2fyf_A PSAT, phosphoserine ami 98.8 1.4E-07 4.8E-12 83.4 15.9 174 3-220 189-397 (398)
113 3p1t_A Putative histidinol-pho 98.8 6.3E-08 2.2E-12 83.1 13.2 169 1-219 160-335 (337)
114 3a9z_A Selenocysteine lyase; P 98.8 1E-08 3.5E-13 91.4 8.4 191 7-220 216-427 (432)
115 1eg5_A Aminotransferase; PLP-d 98.8 9.5E-09 3.2E-13 89.4 7.9 194 1-221 164-376 (384)
116 1u08_A Hypothetical aminotrans 98.8 7.1E-08 2.4E-12 84.7 13.5 106 1-108 191-309 (386)
117 2c0r_A PSAT, phosphoserine ami 98.8 5E-08 1.7E-12 84.9 12.4 171 5-219 166-359 (362)
118 3aow_A Putative uncharacterize 98.8 1.7E-07 5.9E-12 84.9 16.3 175 1-219 245-443 (448)
119 2yrr_A Aminotransferase, class 98.8 2.1E-08 7.3E-13 86.0 9.7 107 1-111 149-276 (353)
120 3e2y_A Kynurenine-oxoglutarate 98.8 5E-07 1.7E-11 79.6 18.7 113 1-117 195-327 (410)
121 2x3l_A ORN/Lys/Arg decarboxyla 98.8 4.1E-08 1.4E-12 89.2 11.4 103 1-108 170-283 (446)
122 3n0l_A Serine hydroxymethyltra 98.8 5E-08 1.7E-12 86.1 11.6 179 1-220 187-388 (417)
123 1iay_A ACC synthase 2, 1-amino 98.8 5.3E-08 1.8E-12 86.9 11.6 105 1-108 216-343 (428)
124 2bwn_A 5-aminolevulinate synth 98.8 1.5E-07 5.2E-12 83.0 14.3 132 1-156 203-350 (401)
125 3mad_A Sphingosine-1-phosphate 98.7 3.1E-08 1E-12 91.1 10.1 170 1-220 264-468 (514)
126 3gbx_A Serine hydroxymethyltra 98.7 5.5E-08 1.9E-12 85.8 11.4 179 1-220 192-395 (420)
127 2qma_A Diaminobutyrate-pyruvat 98.7 6E-08 2.1E-12 88.9 11.9 178 1-220 283-495 (497)
128 2z9v_A Aspartate aminotransfer 98.7 5.6E-08 1.9E-12 85.1 11.2 178 1-221 159-371 (392)
129 3ez1_A Aminotransferase MOCR f 98.7 7.1E-07 2.4E-11 79.3 18.4 83 1-86 201-299 (423)
130 2okj_A Glutamate decarboxylase 98.7 4.4E-08 1.5E-12 90.0 10.6 113 1-116 270-412 (504)
131 3hl2_A O-phosphoseryl-tRNA(SEC 98.7 4.7E-09 1.6E-13 96.5 3.9 104 1-108 241-355 (501)
132 1v2d_A Glutamine aminotransfer 98.7 4E-07 1.4E-11 79.7 16.0 106 1-108 180-297 (381)
133 2huf_A Alanine glyoxylate amin 98.7 9.6E-08 3.3E-12 83.6 11.5 176 1-220 169-382 (393)
134 3piu_A 1-aminocyclopropane-1-c 98.7 1.6E-07 5.4E-12 84.1 13.0 105 1-108 219-348 (435)
135 3ppl_A Aspartate aminotransfer 98.7 3.7E-07 1.3E-11 81.5 15.2 182 1-219 209-418 (427)
136 3ecd_A Serine hydroxymethyltra 98.7 3.8E-07 1.3E-11 80.5 15.1 178 1-220 195-396 (425)
137 3ke3_A Putative serine-pyruvat 98.7 1.4E-06 4.7E-11 76.8 18.7 181 1-220 163-375 (379)
138 3ele_A Amino transferase; RER0 98.7 8.5E-08 2.9E-12 84.4 10.5 102 5-108 210-323 (398)
139 3nnk_A Ureidoglycine-glyoxylat 98.7 1E-07 3.5E-12 83.8 11.0 176 1-220 163-389 (411)
140 3ihj_A Alanine aminotransferas 98.7 4.2E-07 1.4E-11 83.7 15.2 110 1-111 263-405 (498)
141 2o0r_A RV0858C (N-succinyldiam 98.7 5.1E-07 1.7E-11 80.0 14.9 106 1-108 188-306 (411)
142 2po3_A 4-dehydrase; external a 98.7 1.9E-06 6.3E-11 76.9 18.4 108 1-111 160-283 (424)
143 1js3_A DDC;, DOPA decarboxylas 98.7 1.9E-07 6.3E-12 85.2 12.1 177 1-219 260-472 (486)
144 3bc8_A O-phosphoseryl-tRNA(SEC 98.7 1.3E-08 4.5E-13 93.3 4.3 105 1-109 223-338 (450)
145 1ajs_A Aspartate aminotransfer 98.6 2.7E-07 9.3E-12 81.6 12.7 171 1-221 211-411 (412)
146 3h7f_A Serine hydroxymethyltra 98.6 3.3E-07 1.1E-11 82.8 13.4 178 1-220 208-413 (447)
147 3bwn_A AT1G70560, L-tryptophan 98.6 1.4E-06 4.6E-11 77.4 17.2 104 6-111 185-304 (391)
148 3tcm_A Alanine aminotransferas 98.6 1.6E-06 5.6E-11 79.7 18.2 110 1-111 265-406 (500)
149 3b46_A Aminotransferase BNA3; 98.6 5.1E-07 1.7E-11 81.4 14.4 107 1-108 229-350 (447)
150 1vef_A Acetylornithine/acetyl- 98.6 3.8E-08 1.3E-12 86.7 6.6 103 1-109 214-325 (395)
151 3cq5_A Histidinol-phosphate am 98.6 2.3E-07 7.8E-12 81.2 11.6 103 2-108 190-301 (369)
152 3bb8_A CDP-4-keto-6-deoxy-D-gl 98.6 2.7E-07 9.3E-12 82.9 12.1 108 1-111 180-330 (437)
153 2pb2_A Acetylornithine/succiny 98.6 5.8E-08 2E-12 87.0 7.7 169 1-220 230-417 (420)
154 1bw0_A TAT, protein (tyrosine 98.6 5.3E-07 1.8E-11 79.8 13.8 110 1-112 205-336 (416)
155 1b5p_A Protein (aspartate amin 98.6 1.1E-06 3.9E-11 77.2 15.8 106 1-108 192-310 (385)
156 2ch1_A 3-hydroxykynurenine tra 98.6 1.7E-07 5.8E-12 82.2 10.4 177 1-220 168-382 (396)
157 3vp6_A Glutamate decarboxylase 98.6 1.4E-07 4.6E-12 87.3 10.2 110 1-112 273-412 (511)
158 1qz9_A Kynureninase; kynurenin 98.6 2.2E-07 7.5E-12 82.1 10.9 174 1-220 190-401 (416)
159 3f0h_A Aminotransferase; RER07 98.6 8.7E-07 3E-11 77.0 14.4 174 1-220 169-373 (376)
160 3if2_A Aminotransferase; YP_26 98.6 4.8E-07 1.6E-11 80.9 13.0 107 1-110 234-354 (444)
161 4eu1_A Mitochondrial aspartate 98.6 6E-07 2E-11 79.5 13.5 109 1-109 211-345 (409)
162 2jis_A Cysteine sulfinic acid 98.6 4.7E-07 1.6E-11 83.5 13.2 110 1-112 284-424 (515)
163 3ei9_A LL-diaminopimelate amin 98.6 1.1E-06 3.8E-11 78.3 15.2 107 1-108 226-352 (432)
164 3g7q_A Valine-pyruvate aminotr 98.6 1.5E-06 5.1E-11 76.7 15.8 104 1-107 208-324 (417)
165 2z67_A O-phosphoseryl-tRNA(SEC 98.6 6.3E-08 2.1E-12 88.0 6.8 105 1-109 256-370 (456)
166 2eh6_A Acoat, acetylornithine 98.6 1.8E-07 6.3E-12 81.4 9.5 104 1-110 201-311 (375)
167 4adb_A Succinylornithine trans 98.6 1E-07 3.6E-12 83.9 7.5 174 1-220 212-399 (406)
168 1uu1_A Histidinol-phosphate am 98.5 5.5E-07 1.9E-11 77.6 11.6 102 2-108 164-272 (335)
169 1sff_A 4-aminobutyrate aminotr 98.5 2.5E-07 8.6E-12 82.1 9.6 101 1-107 228-337 (426)
170 3meb_A Aspartate aminotransfer 98.5 4.5E-07 1.5E-11 82.0 11.3 179 1-222 230-445 (448)
171 1yaa_A Aspartate aminotransfer 98.5 5.5E-07 1.9E-11 79.7 11.7 109 1-109 204-345 (412)
172 3t18_A Aminotransferase class 98.5 8.3E-07 2.8E-11 78.6 12.2 167 4-220 216-409 (413)
173 3nx3_A Acoat, acetylornithine 98.5 2.2E-07 7.5E-12 81.9 8.2 170 1-220 208-394 (395)
174 3qgu_A LL-diaminopimelate amin 98.5 1.3E-06 4.6E-11 78.2 13.4 175 1-219 237-438 (449)
175 3b1d_A Betac-S lyase; HET: PLP 97.9 1.3E-08 4.5E-13 89.8 0.0 110 1-111 192-317 (392)
176 1v72_A Aldolase; PLP-dependent 98.5 2.2E-05 7.6E-10 67.3 20.4 111 1-117 168-291 (356)
177 2oat_A Ornithine aminotransfer 98.5 4.6E-07 1.6E-11 81.9 10.1 169 1-220 252-438 (439)
178 7aat_A Aspartate aminotransfer 98.5 1.7E-06 5.8E-11 76.2 13.5 108 1-108 203-336 (401)
179 1wyu_B Glycine dehydrogenase s 98.5 7.2E-08 2.5E-12 88.0 4.5 107 1-108 228-363 (474)
180 3rq1_A Aminotransferase class 98.5 8.7E-07 3E-11 78.6 11.4 105 4-108 217-348 (418)
181 3d6k_A Putative aminotransfera 98.5 3.7E-06 1.3E-10 75.0 15.1 179 1-219 207-416 (422)
182 3k40_A Aromatic-L-amino-acid d 98.5 6.1E-07 2.1E-11 82.1 10.0 177 1-219 259-469 (475)
183 4f4e_A Aromatic-amino-acid ami 98.5 2.1E-06 7.1E-11 76.5 13.2 108 1-108 223-355 (420)
184 2ord_A Acoat, acetylornithine 98.5 1.9E-07 6.5E-12 82.3 6.3 168 1-220 212-396 (397)
185 1c4k_A Protein (ornithine deca 98.4 5.5E-07 1.9E-11 87.1 9.7 106 1-111 305-442 (730)
186 1z7d_A Ornithine aminotransfer 98.4 4.7E-07 1.6E-11 81.6 8.0 167 1-220 241-428 (433)
187 4e1o_A HDC, histidine decarbox 98.4 7.7E-07 2.6E-11 81.4 9.4 177 1-219 266-476 (481)
188 1ax4_A Tryptophanase; tryptoph 98.4 7.5E-07 2.6E-11 80.1 7.7 107 1-111 212-344 (467)
189 2q7w_A Aspartate aminotransfer 98.3 2.8E-06 9.6E-11 74.4 10.7 109 1-109 200-333 (396)
190 3asa_A LL-diaminopimelate amin 98.3 3.3E-06 1.1E-10 74.6 10.1 107 1-108 191-315 (400)
191 2vyc_A Biodegradative arginine 98.3 2.4E-06 8.2E-11 82.9 9.8 104 1-110 336-466 (755)
192 3fsl_A Aromatic-amino-acid ami 98.3 6.6E-06 2.3E-10 72.0 11.7 109 1-109 201-334 (397)
193 3dxv_A Alpha-amino-epsilon-cap 98.2 2.5E-06 8.5E-11 76.3 8.6 172 1-221 230-425 (439)
194 2oqx_A Tryptophanase; lyase, p 98.2 4E-06 1.4E-10 75.4 9.4 107 1-111 212-346 (467)
195 2ay1_A Aroat, aromatic amino a 98.2 5.6E-06 1.9E-10 72.6 9.7 108 1-108 197-329 (394)
196 3oks_A 4-aminobutyrate transam 98.2 3.8E-06 1.3E-10 76.0 8.8 172 1-220 256-450 (451)
197 3n75_A LDC, lysine decarboxyla 98.1 4.6E-06 1.6E-10 80.4 8.2 101 2-109 322-443 (715)
198 1o69_A Aminotransferase; struc 98.1 9.3E-06 3.2E-10 71.7 9.4 105 1-108 144-266 (394)
199 3i4j_A Aminotransferase, class 98.1 3.6E-05 1.2E-09 68.5 13.2 177 1-220 220-427 (430)
200 3a8u_X Omega-amino acid--pyruv 98.1 4.4E-06 1.5E-10 75.0 6.6 102 1-107 248-367 (449)
201 3n5m_A Adenosylmethionine-8-am 98.1 1.8E-05 6.1E-10 71.1 10.0 120 1-143 244-382 (452)
202 1wyu_A Glycine dehydrogenase ( 98.1 5.5E-05 1.9E-09 67.8 13.1 112 1-117 220-371 (438)
203 2hox_A ALLIIN lyase 1; cystein 98.0 0.00037 1.3E-08 62.5 18.0 105 6-111 219-339 (427)
204 2eo5_A 419AA long hypothetical 98.0 3E-05 1E-09 69.0 10.6 165 1-220 241-417 (419)
205 3f6t_A Aspartate aminotransfer 97.9 5.9E-05 2E-09 69.9 11.7 53 2-55 273-330 (533)
206 1s0a_A Adenosylmethionine-8-am 97.9 5.5E-05 1.9E-09 67.3 10.9 102 1-107 234-349 (429)
207 4a6r_A Omega transaminase; tra 97.9 6.5E-05 2.2E-09 67.8 10.9 122 1-144 248-385 (459)
208 1zod_A DGD, 2,2-dialkylglycine 97.9 7.6E-05 2.6E-09 66.4 10.9 102 1-107 232-343 (433)
209 4e77_A Glutamate-1-semialdehyd 97.9 5.5E-06 1.9E-10 73.9 3.3 102 1-107 229-340 (429)
210 3tfu_A Adenosylmethionine-8-am 97.9 3.1E-05 1.1E-09 70.3 8.3 168 1-221 263-453 (457)
211 3gju_A Putative aminotransfera 97.9 5.3E-05 1.8E-09 68.4 9.5 122 1-144 250-390 (460)
212 3dod_A Adenosylmethionine-8-am 97.8 3.2E-05 1.1E-09 69.6 6.7 121 1-144 240-379 (448)
213 2epj_A Glutamate-1-semialdehyd 97.8 1.1E-05 3.7E-10 72.1 3.4 101 1-107 232-343 (434)
214 4ffc_A 4-aminobutyrate aminotr 97.7 6.9E-05 2.4E-09 67.8 8.3 171 1-220 254-448 (453)
215 3i5t_A Aminotransferase; pyrid 97.7 0.00027 9.3E-09 64.4 11.9 121 1-144 250-390 (476)
216 3e77_A Phosphoserine aminotran 97.7 0.002 7E-08 57.4 17.3 138 1-156 172-331 (377)
217 3hmu_A Aminotransferase, class 97.7 0.00021 7.1E-09 65.2 10.7 122 1-144 252-387 (472)
218 2e7u_A Glutamate-1-semialdehyd 97.6 8.9E-05 3E-09 65.9 7.0 99 3-107 229-339 (424)
219 4atq_A 4-aminobutyrate transam 97.6 0.00017 6E-09 65.9 9.0 171 1-221 255-455 (456)
220 3k7y_A Aspartate aminotransfer 97.6 0.00021 7.1E-09 64.1 9.0 105 2-106 203-333 (405)
221 3k28_A Glutamate-1-semialdehyd 97.6 6.3E-05 2.2E-09 67.0 5.5 101 1-107 229-339 (429)
222 1svv_A Threonine aldolase; str 97.6 0.00021 7.1E-09 61.1 8.6 106 1-111 172-289 (359)
223 2cy8_A D-phgat, D-phenylglycin 97.6 0.00014 4.8E-09 65.3 7.7 101 1-107 230-343 (453)
224 3l44_A Glutamate-1-semialdehyd 97.6 8.6E-05 2.9E-09 66.1 6.2 120 1-143 231-364 (434)
225 2cjg_A L-lysine-epsilon aminot 97.6 0.0002 6.8E-09 64.6 8.5 165 1-220 260-447 (449)
226 2ez2_A Beta-tyrosinase, tyrosi 97.5 0.00033 1.1E-08 62.6 9.4 105 1-108 203-332 (456)
227 1ohv_A 4-aminobutyrate aminotr 97.5 0.00026 8.8E-09 64.5 8.7 162 1-220 287-470 (472)
228 4e3q_A Pyruvate transaminase; 97.5 0.00079 2.7E-08 61.8 11.9 121 1-143 265-403 (473)
229 3m5u_A Phosphoserine aminotran 97.3 0.0064 2.2E-07 53.7 15.0 125 1-145 160-304 (361)
230 2yky_A Beta-transaminase; tran 96.2 6E-05 2.1E-09 69.1 0.0 123 1-144 262-397 (465)
231 4h51_A Aspartate aminotransfer 97.0 0.01 3.6E-07 53.4 13.6 53 1-53 218-281 (420)
232 2zy4_A L-aspartate beta-decarb 96.9 0.01 3.5E-07 55.1 12.5 58 3-61 277-338 (546)
233 4a0g_A Adenosylmethionine-8-am 96.5 0.0012 4.1E-08 64.7 3.2 171 1-221 624-828 (831)
234 3fq8_A Glutamate-1-semialdehyd 96.5 0.0014 4.6E-08 58.1 3.1 101 1-107 228-339 (427)
235 3qm2_A Phosphoserine aminotran 96.3 0.13 4.3E-06 45.7 14.9 99 5-109 191-308 (386)
236 4ao9_A Beta-phenylalanine amin 95.3 0.011 3.8E-07 53.9 3.9 120 1-143 249-382 (454)
237 4g6x_A Glyoxalase/bleomycin re 36.2 90 0.0031 22.5 6.2 21 138-158 29-50 (155)
238 2ckc_A Chromodomain-helicase-D 35.9 23 0.00078 24.1 2.4 21 99-120 47-67 (80)
239 2zbc_A 83AA long hypothetical 26.2 1.3E+02 0.0045 19.2 6.1 46 98-157 15-61 (83)
240 3v4k_A DNA DC->DU-editing enzy 26.0 67 0.0023 25.8 4.0 55 97-155 114-176 (203)
241 2nwr_A 2-dehydro-3-deoxyphosph 23.2 10 0.00036 31.8 -1.4 13 3-16 174-186 (267)
242 3sz8_A 2-dehydro-3-deoxyphosph 20.9 14 0.00046 31.5 -1.1 35 6-40 195-251 (285)
No 1
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=6.4e-54 Score=392.72 Aligned_cols=218 Identities=33% Similarity=0.428 Sum_probs=194.1
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChh-H------------------HHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-L------------------AKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~-~------------------~~~l 61 (223)
+||++|++||||||+++|+.++|+++|+|++++|+||+++||+|++||+++.+++. + ..++
T Consensus 192 la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~ 271 (430)
T 3ri6_A 192 VVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKA 271 (430)
T ss_dssp HHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHH
T ss_pred HHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHH
Confidence 47899999999999999999999999999999999999999999999999865431 1 1222
Q ss_pred H-HHHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCe-eE
Q 027424 62 Y-FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VL 139 (223)
Q Consensus 62 ~-~~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~gg-l~ 139 (223)
+ ......|..++|+++|+++++++++..|++++++||+++++||+++|.|++|+||++++||+|+++++|+ |+|| |+
T Consensus 272 ~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~-g~Gg~~l 350 (430)
T 3ri6_A 272 RKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQF-RYAGSIL 350 (430)
T ss_dssp HHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHC-SSCCSEE
T ss_pred HHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhC-CCCceEE
Confidence 2 2345678899999999999999999999999999999999999999999999999999999999999999 9999 99
Q ss_pred EEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 140 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 140 sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
||++++.+.+++|++++++|.+++|||+++||+++|++++|+.+++|+|++.|+++++||||||+||++||++||+|||+
T Consensus 351 sf~l~~~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~~dl~~dl~~al~ 430 (430)
T 3ri6_A 351 TFELESKEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEIEDLKEDILQALC 430 (430)
T ss_dssp EEECSSHHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred EEEECCHHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhhC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999985
No 2
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=1.3e-52 Score=380.12 Aligned_cols=219 Identities=45% Similarity=0.772 Sum_probs=210.1
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCccccee-EEEecChhHHHHHHHHHHhcCCCCChHhHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAG-VLAVKGERLAKELYFLQNAEGSGLAPFDCWI 79 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G-~v~~~~~~~~~~l~~~~~~~g~~~sp~da~l 79 (223)
+||++|+++|||||+++|+.++|+++|+|++++|+||+++||++.++| +++.+++++.++++......|..++|+++|+
T Consensus 177 la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~ 256 (400)
T 3nmy_A 177 IARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFL 256 (400)
T ss_dssp HHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHH
T ss_pred HHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 478999999999999999999999999999999999999999999999 8878888888888888888899999999999
Q ss_pred HHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-CHHHHHHHHhhcCc
Q 027424 80 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKY 158 (223)
Q Consensus 80 l~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~~~~~~~f~~~l~l 158 (223)
++++++++..|++++.+|+.++++||++||.|.+|+||++++||+|+++++|++|+|+|++|++. +.+.+++|++++++
T Consensus 257 ~l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~ 336 (400)
T 3nmy_A 257 ALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTEL 336 (400)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSS
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999995 45779999999999
Q ss_pred ceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 159 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 159 ~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
|.+++|||+++||+++|++++|+.+++++++++||++++||||||+||++|||+||+|||+
T Consensus 337 ~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 337 FTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp SEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred ceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999997
No 3
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-49 Score=361.31 Aligned_cols=219 Identities=37% Similarity=0.640 Sum_probs=205.9
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+|+++|++||+|+|++++..++|+++|+|++++|+||+++||++.++|+++++++.+.+.++......|..++|+++|++
T Consensus 191 la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~ 270 (414)
T 3ndn_A 191 LAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVL 270 (414)
T ss_dssp HHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHH
T ss_pred HHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 47899999999999999988899999999999999999999999999999876654444666666777889999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CC----HHHHHHHHhh
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GS----LALSKHVVET 155 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~----~~~~~~f~~~ 155 (223)
+++++++..|++++.+|+.++++||+++|.|.+|+||+++++|+|++++++++|+|+|++|++ ++ .+.+++|+++
T Consensus 271 ~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~ 350 (414)
T 3ndn_A 271 LKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDK 350 (414)
T ss_dssp HHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999 44 7889999999
Q ss_pred cCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 156 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 156 l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
++++.+++|||+++||+++|+.++|+.+++++|++.|+++++||||||+||++||++||+|||+
T Consensus 351 l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~~~dli~dl~~al~ 414 (414)
T 3ndn_A 351 MRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRALS 414 (414)
T ss_dssp CSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred CccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999984
No 4
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=4.2e-46 Score=342.46 Aligned_cols=220 Identities=37% Similarity=0.637 Sum_probs=206.5
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++++||||+++++.++|+++|+|++++|+||+++||+|+.+|++++++ ++.+++.......|..++|+++|++
T Consensus 225 la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~~~l~~~~~~~g~~~~~~~a~~~ 303 (445)
T 1qgn_A 225 LCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPL-KLVSEIRNLHHILGGALNPNAAYLI 303 (445)
T ss_dssp HHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECH-HHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred HHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECH-HHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 478999999999999999999999999999999999999999999999988754 6777777777778888999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-CHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~~~~~~~f~~~l~l~ 159 (223)
+++++++..|++++.+|+.+++++|+++|.|.+|+||++++||+|+++++|++|+|++++|++. +.+.+.+|+++++++
T Consensus 304 ~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~ 383 (445)
T 1qgn_A 304 IRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIP 383 (445)
T ss_dssp HHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSS
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999994 556789999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
.+++|+|+.+|++++|++++|..++++.+..+|+++++||||||+||++||++||++||+++
T Consensus 384 ~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~Edid~li~~L~~al~~~ 445 (445)
T 1qgn_A 384 YIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 445 (445)
T ss_dssp EECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred eEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999853
No 5
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=3.5e-44 Score=322.86 Aligned_cols=216 Identities=44% Similarity=0.748 Sum_probs=204.1
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++++||+|+++++.++|+.+|+|++++|+||+++||+|..+|+++.+++++.+.+.......|...+|++++++
T Consensus 176 la~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~ 255 (392)
T 3qhx_A 176 LGADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLT 255 (392)
T ss_dssp HHHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred HHHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999888778888888777778889999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-CHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~~~~~~~f~~~l~l~ 159 (223)
+++++++..|++++.+|+..++++|+++|.|.+|+||+++++|+|++++++++|+|+|++|++. +.+.+++|+++++++
T Consensus 256 ~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~ 335 (392)
T 3qhx_A 256 MRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIF 335 (392)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSS
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999994 478899999999999
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
.+++|+|+.+|++++|..++|..++++ ..|+.+++||||||+|+++|+++||++||+
T Consensus 336 ~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~g~~~~~iRlSvg~e~~~~~i~~l~~al~ 392 (392)
T 3qhx_A 336 ILAESLGSVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLDDLKQALG 392 (392)
T ss_dssp EECSCCCCSSCEEECGGGTSCGGGBTT---BCCCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred eECCCCCCCCceeeCcccccccccCHH---HcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 999999999999999999999888765 889999999999999999999999999984
No 6
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=1.5e-42 Score=313.67 Aligned_cols=220 Identities=45% Similarity=0.794 Sum_probs=206.8
Q ss_pred CccccC-CEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHH
Q 027424 1 MAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 79 (223)
Q Consensus 1 ia~~~g-~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~l 79 (223)
+||++| +++|||+|++.+..++|+++|+|++++|+||+++||+++.+|+++++++++.++++......|.+.+|+++++
T Consensus 176 la~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~ 255 (403)
T 3cog_A 176 IVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYL 255 (403)
T ss_dssp HHTSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred HHHHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 478999 9999999999998889999999999999999999999988898888777787888777777788899999999
Q ss_pred HHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHHHHHHhhcCc
Q 027424 80 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKY 158 (223)
Q Consensus 80 l~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~~~f~~~l~l 158 (223)
+.++++++..|++++.+|+..+++||+++|.|.+|.||+|+++|+++++.+++++.|++++|++ ++.+.+.+|++++++
T Consensus 256 ~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~i 335 (403)
T 3cog_A 256 CNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKL 335 (403)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSS
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999999999999999899999999999 456788999999999
Q ss_pred ceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 159 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 159 ~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
+..++|+|+++||+++|++++|..++++.+...|+++++||||||+|+.+|+|+||.+||++
T Consensus 336 ~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~ 397 (403)
T 3cog_A 336 FTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 397 (403)
T ss_dssp SEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred ceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999974
No 7
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=6.8e-43 Score=318.13 Aligned_cols=216 Identities=29% Similarity=0.506 Sum_probs=197.7
Q ss_pred Cccc--cCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHH
Q 027424 1 MAHA--HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 78 (223)
Q Consensus 1 ia~~--~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ 78 (223)
+||+ +|++++||+|+++++.++|+++|+|++++|+||+++||+++++|+++.++ ++.++++......|..++|+++|
T Consensus 192 la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~-~~~~~l~~~~~~~G~~~~~~~a~ 270 (415)
T 2fq6_A 192 AVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNA-RCWEQLRENAYLMGQMVDADTAY 270 (415)
T ss_dssp HHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECT-TTHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCH-HHHHHHHHHHHhcCCCCCHHHHH
Confidence 4788 99999999999999989999999999999999999999999999998776 46677777777788889999999
Q ss_pred HHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC---HHHHHHHHhh
Q 027424 79 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSKHVVET 155 (223)
Q Consensus 79 ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~---~~~~~~f~~~ 155 (223)
+++++++++..|++++.+|+..+++||+++|.|.+|+||+++++|+|+++++++.++|++++|++++ .+.+++|+++
T Consensus 271 ~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~ 350 (415)
T 2fq6_A 271 ITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDN 350 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTT
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999954 6789999999
Q ss_pred cCcceeccccCCCCCCCCC--CccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 156 TKYFSITVSFGSVKSLISM--PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 156 l~l~~~~~s~G~~~sli~~--p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
++++.+++|+|+.+|++++ |+.++|... .+++|+++++||||||+|+.+|+|+||.+||+++
T Consensus 351 l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~----~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~~ 414 (415)
T 2fq6_A 351 FSLFSMAYSWGGYESLILANQPEHIAAIRP----QGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARI 414 (415)
T ss_dssp CSSCEECSCCCSSSCEEEEECHHHHHTTCT----TCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHTT
T ss_pred CCcCeEeccCCCCceeEEecCCCccccccc----hhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHhh
Confidence 9999999999999999998 888887431 1257888999999999999999999999999864
No 8
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=4.7e-42 Score=308.18 Aligned_cols=220 Identities=41% Similarity=0.725 Sum_probs=206.1
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+||++|++++||+|++.++.++|+++|+|++++|+||+++||++.++|+++++++++.++++......|..++|.+++++
T Consensus 169 ~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~ 248 (389)
T 3acz_A 169 VCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLC 248 (389)
T ss_dssp HHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred HHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 47899999999999999988899999999999999999999999998888887646777777766667888999999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+++++++..|++++.+|+..++++|+++|.|.++.||+|+++|+++++.++++|+|++++|++.+.+.+.+|++.++++.
T Consensus 249 ~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~l~~~~i~~ 328 (389)
T 3acz_A 249 ARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKSFEAAKKLMEHLKVCT 328 (389)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSHHHHHHHHTTCSSSE
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECCHHHHHHHHHhCCCcE
Confidence 99999999999999999999999999999999999999999999999999989999999999955778899999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
.++||||++||+++|++++|+.++++++...|+++++||||||+||.+|+++||++||++
T Consensus 329 ~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~~ 388 (389)
T 3acz_A 329 LAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALEL 388 (389)
T ss_dssp EBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHTC
T ss_pred ECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999975
No 9
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=1.7e-40 Score=301.33 Aligned_cols=219 Identities=34% Similarity=0.581 Sum_probs=196.6
Q ss_pred CccccCCEEEEecCC-CCCCCcCcccCCCcEEEecccccccCCcccceeEEEecC-hhH----HHHH-------------
Q 027424 1 MAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG-ERL----AKEL------------- 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~-~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~-~~~----~~~l------------- 61 (223)
+||++|+++|||+++ +.++..+|+.+|+|+++.|+||+++||++.+||+++.++ .++ .+.+
T Consensus 169 ~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~ 248 (421)
T 2ctz_A 169 AAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLT 248 (421)
T ss_dssp HHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHH
T ss_pred HHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhh
Confidence 478999999999999 888878899999999999999999999999999887632 111 1111
Q ss_pred ------------HH-HHHhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHH
Q 027424 62 ------------YF-LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 128 (223)
Q Consensus 62 ------------~~-~~~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~ 128 (223)
+. ....+|..++|..+|+.+++++++..|++++.+|+..++++|+++|.|..|.||+++++|+|+++
T Consensus 249 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~ 328 (421)
T 2ctz_A 249 EAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRA 328 (421)
T ss_dssp HHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHH
T ss_pred hhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHH
Confidence 11 12446778999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh-CCCCeeEEEEeCC-HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC
Q 027424 129 YSQA-KGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED 206 (223)
Q Consensus 129 ~~~~-~g~ggl~sf~~~~-~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd 206 (223)
++++ +|.|+|++|++.+ .+.+.+|+++++++.+++|+|+.+|++++|+.++|..+++++++.+|+++++||+|||+||
T Consensus 329 ~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~e~ 408 (421)
T 2ctz_A 329 QKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGLEH 408 (421)
T ss_dssp HHHHTTCCCSEEEEEETTHHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSC
T ss_pred HHhccCCCceEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCCCC
Confidence 9999 7999999999965 4678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 027424 207 VNDLISDLDKALR 219 (223)
Q Consensus 207 ~~dL~~dl~~Al~ 219 (223)
++||++||++||+
T Consensus 409 ~~~li~~l~~al~ 421 (421)
T 2ctz_A 409 VEDLKAELKEALA 421 (421)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999985
No 10
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=3.4e-38 Score=283.32 Aligned_cols=221 Identities=38% Similarity=0.651 Sum_probs=186.2
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh-cCCCCChHhHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGSGLAPFDCWI 79 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~-~g~~~sp~da~l 79 (223)
+|+++|+++++|++++.+....|+.+|+|+++.|+||+++|+++.++|+++++++.+.+.++..... .|.+++|..++.
T Consensus 175 l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (398)
T 1gc0_A 175 IARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAAL 254 (398)
T ss_dssp HHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHH
T ss_pred HHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHH
Confidence 4789999999999998887778899999999999999999999999898877654444355555555 677889999999
Q ss_pred HHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC-HHHHHHHHhhcCc
Q 027424 80 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKY 158 (223)
Q Consensus 80 l~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~-~~~~~~f~~~l~l 158 (223)
+.++++++..|+++..+|+..++++|+++|.|.+|.||+++++|+|+++.+++.+.|++++|++.+ .+.+.+|++.+++
T Consensus 255 ~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~i 334 (398)
T 1gc0_A 255 LMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRRFMNALQL 334 (398)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHHHHHHHHCSS
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999888999999999954 4678999999999
Q ss_pred ceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 159 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 159 ~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
+..++|+|+.+|++++|.+++|..++.+.+..+|++++.||||+|+|+.+|++++|.+||+++
T Consensus 335 ~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 335 FSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp SEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999853
No 11
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=8.9e-38 Score=281.36 Aligned_cols=221 Identities=45% Similarity=0.766 Sum_probs=202.6
Q ss_pred Ccccc----CCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHh
Q 027424 1 MAHAH----GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 76 (223)
Q Consensus 1 ia~~~----g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~d 76 (223)
+||++ |++++||++++.+...+|+++|+|+++.|+||+++|+++.+||+++++++++.+.+.......|..++|.+
T Consensus 163 la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 242 (393)
T 1n8p_A 163 LIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFD 242 (393)
T ss_dssp HHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHH
T ss_pred HHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHH
Confidence 46788 99999999998776668889999999999999999999999998888767777777766666788889999
Q ss_pred HHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCC-eeEEEcCCCCCCcchHHHHhhhCC-C-CeeEEEEeC-CHHHHHHH
Q 027424 77 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR-VKKVNYAGLPEHPGHELHYSQAKG-A-GSVLSFLTG-SLALSKHV 152 (223)
Q Consensus 77 a~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~-v~~V~yP~l~~~~~~~~~~~~~~g-~-ggl~sf~~~-~~~~~~~f 152 (223)
++++.++++++..|+++..+|+..++++|+++|. +.+|.||+++++|+|+++.++++| . |++++|++. +.+.+++|
T Consensus 243 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~ 322 (393)
T 1n8p_A 243 AWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKF 322 (393)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHH
Confidence 9999999999999999999999999999999998 999999999999999999998877 7 999999994 56779999
Q ss_pred HhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 153 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 153 ~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
++.++++.+++|+|+..|++.+|+.++|..++.+.++.+|+++++||||+|+|+.+|+|+||.+||+++
T Consensus 323 l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 323 ASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp HHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999988889999999999999999999999999999999864
No 12
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=4.7e-37 Score=277.36 Aligned_cols=220 Identities=39% Similarity=0.719 Sum_probs=198.7
Q ss_pred Cccc-cCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc-CCCCChHhHH
Q 027424 1 MAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-GSGLAPFDCW 78 (223)
Q Consensus 1 ia~~-~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~-g~~~sp~da~ 78 (223)
+|++ +|+++|+|++++.+....|+++|+|+++.|+||+++|+++.++|+++++++.+.+++....... |..++|+.++
T Consensus 172 la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~ 251 (404)
T 1e5e_A 172 DAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAW 251 (404)
T ss_dssp HHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHH
T ss_pred HHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHH
Confidence 4788 9999999999998887789999999999999999999999987888776543332565444445 6678999999
Q ss_pred HHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH-HHHHHHHhhcC
Q 027424 79 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTK 157 (223)
Q Consensus 79 ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~-~~~~~f~~~l~ 157 (223)
.+.++++++..|++++.+|+..+++||++++.|.++.||+|+++|++++...+++|.|++++|++.+. +.+.+|++.++
T Consensus 252 ~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~ 331 (404)
T 1e5e_A 252 LITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGAKKLLDNLK 331 (404)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHTCS
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCCHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999998889999999998654 66888999999
Q ss_pred cceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 158 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 158 l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
++..++|||+++||+++|+.++|..++++++...|++++.||||+|+||.++++++|++|++.
T Consensus 332 i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 332 LITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDA 394 (404)
T ss_dssp SSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred CceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999974
No 13
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=8.7e-37 Score=275.56 Aligned_cols=220 Identities=32% Similarity=0.570 Sum_probs=198.4
Q ss_pred CccccCCEEEEecCCCCC-CCcCcccCCCcEEEecccccccCCcccceeEEEecCh------------------------
Q 027424 1 MAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE------------------------ 55 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~------------------------ 55 (223)
+|+++|+++++|++++.+ +.++|+..|+|+++.|+||+++|+++.+||+++.+++
T Consensus 165 l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 244 (412)
T 2cb1_A 165 LAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALR 244 (412)
T ss_dssp HHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHG
T ss_pred HHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccc
Confidence 478999999999999888 7788999999999999999999999999998876643
Q ss_pred --hHHHHHHHHH-HhcCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh
Q 027424 56 --RLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 56 --~~~~~l~~~~-~~~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~ 132 (223)
++.++++... +..|..++|..+|+..++++++..|+++..+++..++++|+++|.|..|+||++++||+|+++++++
T Consensus 245 ~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~ 324 (412)
T 2cb1_A 245 ARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYL 324 (412)
T ss_dssp GGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhC
Confidence 3334444333 4457678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Q 027424 133 KGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLIS 212 (223)
Q Consensus 133 ~g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~ 212 (223)
.+.|++++|++++.+.+.+|+++++++. +.|||+.+|++++|++++|..+++++++++|++++.||+|+|+|+.+|+++
T Consensus 325 ~~~~~iv~~~~~~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~ 403 (412)
T 2cb1_A 325 ASGGPILTLDLGDLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLA 403 (412)
T ss_dssp SSSCSEEEEECSSHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHH
T ss_pred CCCceEEEEEeCCHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHH
Confidence 9999999999966678899999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcC
Q 027424 213 DLDKALRTG 221 (223)
Q Consensus 213 dl~~Al~~~ 221 (223)
+|.+||+++
T Consensus 404 ~l~~al~~~ 412 (412)
T 2cb1_A 404 LFEEALEAV 412 (412)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHhhC
Confidence 999999863
No 14
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=5.5e-36 Score=276.16 Aligned_cols=223 Identities=87% Similarity=1.310 Sum_probs=204.5
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+|+++|++||+|++++.+..+.|+++|+|++++|+||+++||++.++|+++++++++.+.+.......|..++|++++.+
T Consensus 242 la~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~ 321 (464)
T 1ibj_A 242 MAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLC 321 (464)
T ss_dssp HHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHH
T ss_pred HHHHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 47899999999999998887889999999999999999999988889989887767777777776667878899999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcce
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 160 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~ 160 (223)
+++++++..|+++..+|+..+++||++++.+.++.||+|.++|+++++..+.+|+|++++|++++.+..++|++.|+.+.
T Consensus 322 ~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~L~~~g 401 (464)
T 1ibj_A 322 LRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFS 401 (464)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSE
T ss_pred HhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCHHHHHHHHHhcCcce
Confidence 99999999999999999999999999999999999999999999999888888899999999976666778999999999
Q ss_pred eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 027424 161 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGPL 223 (223)
Q Consensus 161 ~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~~~ 223 (223)
+++++|+++||+++|+.++|+.++++.+...|++++.||||+|+||.++++++|++||++.|.
T Consensus 402 i~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~edi~~li~~L~~al~~~~~ 464 (464)
T 1ibj_A 402 IAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTFPL 464 (464)
T ss_dssp ECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHSCCC
T ss_pred EeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHhhcCC
Confidence 999999999999999999998888777888899999999999999999999999999998774
No 15
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=3.6e-32 Score=243.61 Aligned_cols=221 Identities=41% Similarity=0.743 Sum_probs=197.8
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc-CCCCChHhHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-GSGLAPFDCWI 79 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~-g~~~sp~da~l 79 (223)
+|+++|+++++|++++.+....|+.+|+|+++.|+||+++|++..++|+++++++.+.+.++...... |.+.+|..++.
T Consensus 174 l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (398)
T 2rfv_A 174 IAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWL 253 (398)
T ss_dssp HHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHH
T ss_pred HHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHH
Confidence 47899999999999998887789999999999999999999999888888776543332555555555 67889999999
Q ss_pred HHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC-HHHHHHHHhhcCc
Q 027424 80 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKY 158 (223)
Q Consensus 80 l~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~-~~~~~~f~~~l~l 158 (223)
+.++++++..|+++..+|+..++++|+++|.|.+|.||+|+++|++.+...+.++.|++++|++.+ .+.+.+|++.++.
T Consensus 254 ~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~ 333 (398)
T 2rfv_A 254 TLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVEL 333 (398)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSS
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999999999999999988778899999999964 4668889999999
Q ss_pred ceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 159 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 159 ~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
..+++++|+.+|++++|...+|..++.+.+...|++++.||||+|+|+.+|++++|.+||+.+
T Consensus 334 ~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 334 CLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp SEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999998888889999999999999999999999999999999753
No 16
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.97 E-value=7.2e-31 Score=228.36 Aligned_cols=221 Identities=45% Similarity=0.738 Sum_probs=196.2
Q ss_pred Cccc-cCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh-cCCCCChHhHH
Q 027424 1 MAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGSGLAPFDCW 78 (223)
Q Consensus 1 ia~~-~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~-~g~~~sp~da~ 78 (223)
+|++ +|+++++|++++.+....|+++|+|+++.|++|+++|++..++|+++++++++.++++..... .|.+.+|..++
T Consensus 108 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (331)
T 1pff_A 108 QARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAW 187 (331)
T ss_dssp HHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHH
T ss_pred HHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHH
Confidence 4788 999999999998776667788899999999999999999887888877653666666554444 46678888999
Q ss_pred HHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCc
Q 027424 79 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 158 (223)
Q Consensus 79 ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l 158 (223)
.+.++++++..|+++..+|+..+.++|++++.+.++.||++.+.|++.+...+.++.|++++|.+.+.+...++++..++
T Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI 267 (331)
T 1pff_A 188 LITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLEKAKKVLDNCHV 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHTCSS
T ss_pred HHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999988887778899999999777778899999999
Q ss_pred ceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 159 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 159 ~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
+..+.|+|+.+|++.+|...+|..++.+.+...|++++.||+|+|+++.++.++++.++|+++
T Consensus 268 ~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 268 VSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp SEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred ceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 988999999999999998889988888888899999999999999999999999999999864
No 17
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=6.7e-30 Score=227.68 Aligned_cols=221 Identities=43% Similarity=0.676 Sum_probs=197.7
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
+|+++|+++|+|++++.+....|+++|+|+++.|++|+++|++..++|+++++++++.+.+.......+...+|..++..
T Consensus 162 l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 241 (386)
T 1cs1_A 162 LAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLL 241 (386)
T ss_dssp HHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHH
T ss_pred HHHHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 47899999999999988877778889999999999999999998888888887756777776665556667899999999
Q ss_pred HhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-CHHHHHHHHhhcCcc
Q 027424 81 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYF 159 (223)
Q Consensus 81 ~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~~~~~~~f~~~l~l~ 159 (223)
.++++.+..|+++..+|+..+.++|+++|.+.++.||++.+.|++++...+.++.|++++|++. ..+...++++..+++
T Consensus 242 ~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 321 (386)
T 1cs1_A 242 LRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLF 321 (386)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTCSSS
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCCHHHHHHHHHhCCcc
Confidence 8999999999999999999999999999999999999999999999998877889999999994 456678888888998
Q ss_pred eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 160 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 160 ~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
..+.++|+.+|++++|.++.|...+.+.+...|+.++.||||+|+|+.++++++|.+||+.+
T Consensus 322 ~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 322 TLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp EEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 87888999999999999999998888888899999999999999999999999999999853
No 18
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.91 E-value=1.3e-24 Score=198.60 Aligned_cols=202 Identities=14% Similarity=0.078 Sum_probs=162.8
Q ss_pred Cccc--cCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--HhcCCCCCh-
Q 027424 1 MAHA--HGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGSGLAP- 74 (223)
Q Consensus 1 ia~~--~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~--~~~g~~~sp- 74 (223)
+||+ +|++++|||+++.+. .++|+++|+||+++|+||+++||++..||+++++ +++.++++... ...|..++|
T Consensus 205 la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~l~~~~~~~~~g~~~~~~ 283 (427)
T 3i16_A 205 CVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEKTSYRLTVPGIGGECGST 283 (427)
T ss_dssp HHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCC
T ss_pred HHHHhCCCCEEEEECCCccccccCCccccCCeEEEecCcccCCCCCCceEEEEEEC-HHHHHHHHHhcccCccCccCCcc
Confidence 4678 999999999999987 7899999999999999999999999999999765 56777776532 345556677
Q ss_pred Hh-HHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHH
Q 027424 75 FD-CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 153 (223)
Q Consensus 75 ~d-a~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~ 153 (223)
++ +++++++++++..|++++.+||..+++||++++. +| ||+ ++||+|++ +++|++++.+.+.+|+
T Consensus 284 ~~~a~~~l~gl~~~~~r~~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~~----------i~~i~l~~~~~~~~f~ 349 (427)
T 3i16_A 284 FGVVRSMYQGLFLAPHISMEALKGAILCSRIMELAGF--EV-MPK-YDEKRSDI----------IQSIKFNDKDKLIEFC 349 (427)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CEEEECSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCccE----------EEEEEECCHHHHHHHH
Confidence 77 8999999999999999999999999999999997 88 999 89998865 9999999999999999
Q ss_pred hhcCcceecccc--------CCCCCCCCCCc-c---ccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 154 ETTKYFSITVSF--------GSVKSLISMPC-F---MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 154 ~~l~l~~~~~s~--------G~~~sli~~p~-~---~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
++|+.+....|+ .|+++-+...+ + -+..+++ +...+-+..+...=|=...+...-.+.+|+.+.
T Consensus 350 ~~l~~~~~~~s~~~p~~~~~~gy~~~~~~~~~~~~~~~~~e~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
T 3i16_A 350 KGIQTGSPIDSFVSCEPWDMPGYTDQVIMAAGAFIQGSSIELS----ADAPIREPYIAYLQGGLTFDHAKIGILIALSRI 425 (427)
T ss_dssp HHHHHTCSSSTTSCCCCBCC---CCCEEEEECCSSTTCSSSSE----EEEESCTTCEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred HHHhhcCcccccccCcCCCCCCCCCceeeccCcCCCCcccccc----CCCCCCCCeEEEEcCCccHHHHHHHHHHHHHHH
Confidence 999999887775 33333221110 1 1122222 334567888999999999999999999988764
No 19
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.90 E-value=1.8e-23 Score=191.13 Aligned_cols=202 Identities=15% Similarity=0.080 Sum_probs=161.0
Q ss_pred Cccc--cCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcCCCCCh-
Q 027424 1 MAHA--HGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAP- 74 (223)
Q Consensus 1 ia~~--~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g~~~sp- 74 (223)
+||+ +|++++||++++.++ .++|+++|+||++.|+||+++||++..||+++++ +++.++++.... ..|..++|
T Consensus 205 ia~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li~~l~~~~~~~~~g~~~~~~ 283 (427)
T 3hvy_A 205 SIREVNENVIVFVDNCYGEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGK-EEYVTQATFRVTVPGIGGECGST 283 (427)
T ss_dssp HHHHHCSSSEEEEECTTCTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCC
T ss_pred HHHHhCCCCEEEEECCccccccCCCCcccCCeEEEECCcccccccccceEEEEEEC-HHHHHHHHHHhhcCCcccccCCC
Confidence 4678 899999999999987 6899999999999999999999999999999775 677777766442 33433444
Q ss_pred -HhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHH
Q 027424 75 -FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 153 (223)
Q Consensus 75 -~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~ 153 (223)
..+++++++++++..|++++.+||..++++|++++. +| ||+ +++|.|++ +++|.+++.+.+.+|+
T Consensus 284 ~~~a~~~~~gl~~~~~r~~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~l----------i~~~~l~~~~~~~~f~ 349 (427)
T 3hvy_A 284 FGVMRSLYEGLFMAPHVTIEAVKGAVFCARIMELAGF--DV-LPK-YNDKRTDI----------IQAIKFNDEKKLIDFI 349 (427)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------EEEEECSSHHHHHHHH
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCceE----------EEEEeCCCHHHHHHHH
Confidence 449999999999999999999999999999999996 88 999 88887754 9999999999999999
Q ss_pred hhcCcceecccc--------CCCCCCCCCCc-c---ccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhcC
Q 027424 154 ETTKYFSITVSF--------GSVKSLISMPC-F---MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 221 (223)
Q Consensus 154 ~~l~l~~~~~s~--------G~~~sli~~p~-~---~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~~ 221 (223)
++++.+....|+ +|+++.+...+ + -+..+++ +...+-+..+...=|-...+...-.+.+|+.+.
T Consensus 350 ~~l~~~~~~~s~~~p~~~~~~Gy~~~~~~~~~~~~~~~~~e~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
T 3hvy_A 350 KGIQTASPVDSFVQCEAWDMPGYEDKVIMAAGTFVQGASIELS----ADAPIREPYIGYLQGGLTFDHAKLGVLIALSKL 425 (427)
T ss_dssp HHHHHTCSSSTTCCC----------CEEEECCCSSTTCSSSSE----EEEESCTTCEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred HHhccccccccccCCCCCCCCCCcCceeeeccccCCCcccccc----CCCCCCCCeeEEEcCCccHHHHHHHHHHHHHHh
Confidence 999998766654 56666653321 1 1222333 345677889999999999999999999998865
No 20
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.88 E-value=2.1e-22 Score=182.90 Aligned_cols=199 Identities=17% Similarity=0.110 Sum_probs=158.2
Q ss_pred Cccc--cCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh------cCCC
Q 027424 1 MAHA--HGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA------EGSG 71 (223)
Q Consensus 1 ia~~--~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~------~g~~ 71 (223)
+||+ +|++++|||+++.++ .++|+++|+|+++.|+||+++||++.+||+++++ +++.++++..... .|..
T Consensus 188 la~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~g~~ 266 (409)
T 3jzl_A 188 FVKNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGK-EALVDLCGYRLTTPGIGREAGAS 266 (409)
T ss_dssp HHHHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCC
T ss_pred HHHhhCCCCEEEEeCCcccccccCCccccCCeEEEECccccCCccCCceEEEEEeC-HHHHHHHHHHhcccccccccccc
Confidence 3678 999999999999987 6899999999999999999999999999999775 6777777654322 2333
Q ss_pred CChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHH
Q 027424 72 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKH 151 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~ 151 (223)
+++ +++++++++++..|++++.+||..++++|++++. +| ||+ +++|+|++ +++|.+++.+.+.+
T Consensus 267 ~~~--~~~~l~gl~~~~~r~~~~~~~a~~la~~L~~~g~--~v-~p~-~~~~~~~~----------i~~i~l~~~~~~~~ 330 (409)
T 3jzl_A 267 LYS--LLEMYQGFFLAPHVTAQAIKGARFTAAMLAEFGV--EA-DPV-WDAPRTDL----------IQSVSFHNKEKMVA 330 (409)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CCEEECSCHHHHHH
T ss_pred HHH--HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCC--cc-cCC-CCCCCccE----------EEEEEeCCHHHHHH
Confidence 333 6889999999999999999999999999999986 78 999 88887754 99999999999999
Q ss_pred HHhhcCcceecccc--------CCCCCCCCCCc-c---ccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 152 VVETTKYFSITVSF--------GSVKSLISMPC-F---MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 152 f~~~l~l~~~~~s~--------G~~~sli~~p~-~---~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
|+++|+.+....|+ +|+++-+...+ + -+..+++ +...+-+..+...=|=...+...-.+.+|++
T Consensus 331 ~~~~L~~~~~~~s~~~p~~~~~~gy~~~~~~~~~~f~~~~~~e~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (409)
T 3jzl_A 331 FAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELT----ADGPIREPYQLYVQGGLTYEHIKIAVTRAIQ 406 (409)
T ss_dssp HHHHHHHTSSSSTTSCCCCBCCTTCSSCEEEECCCSSTTCSSSCE----EEEESSTTTEEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcccccCCCCCCCCCCCCCceeEeccccCCCcceeec----CCCCCCCCeEEEEcCCccHHHHHHHHHHHHH
Confidence 99999998766554 35554442211 1 1222232 3345678889999999999998888888887
Q ss_pred c
Q 027424 220 T 220 (223)
Q Consensus 220 ~ 220 (223)
+
T Consensus 407 ~ 407 (409)
T 3jzl_A 407 K 407 (409)
T ss_dssp H
T ss_pred h
Confidence 5
No 21
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.70 E-value=4.3e-17 Score=148.76 Aligned_cols=148 Identities=16% Similarity=0.116 Sum_probs=120.3
Q ss_pred Cccc--cCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh--cCCCCCh-
Q 027424 1 MAHA--HGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAP- 74 (223)
Q Consensus 1 ia~~--~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--~g~~~sp- 74 (223)
+|++ +|++++||++++.+. ..+|+++|+|+++.|++|+++||....||+++++ +++.++++..... .|...+|
T Consensus 194 la~~~~~~~~livDea~~~~~~~~~~~~~g~Di~~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~~~~ 272 (431)
T 3ht4_A 194 FVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIVKTGGYIVGK-EQYVEACAYRLTSPGIGAEAGAS 272 (431)
T ss_dssp HHHHHCTTCEEEEECTTCTTSSSCCGGGTTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTTTSCSCC
T ss_pred HHHhhCCCCEEEEeCCChhhccCCCccccCCeEEEcCccccCCCCCCCceEEEEec-HHHHHHHHHHhccCCcccccCcc
Confidence 3678 999999999998886 4789999999999999999999988889988775 5677776654433 2333333
Q ss_pred -HhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHH
Q 027424 75 -FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 153 (223)
Q Consensus 75 -~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~ 153 (223)
..+++++++++++..|++++.+|+..++++|++++. +| ||+ +++|. .+-+++|++++.+.+.+|+
T Consensus 273 ~~~~~~~~~~l~~~~~~~~~~~~~a~~l~~~L~~~g~--~v-~p~-~~~~~----------~~li~~i~l~~~~~~~~~~ 338 (431)
T 3ht4_A 273 LYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGM--NT-SPA-WNAPR----------TDLIQSVQFDDKDRMIAFC 338 (431)
T ss_dssp CSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CE-ESC-TTSCC----------SSSCCEEECCCHHHHHHHH
T ss_pred HHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHhCcC--Ee-cCC-CCCCC----------ccEEEEEEeCCHHHHHHHH
Confidence 337889999999999999999999999999999985 67 887 66554 3559999998888999999
Q ss_pred hhcCcceecc
Q 027424 154 ETTKYFSITV 163 (223)
Q Consensus 154 ~~l~l~~~~~ 163 (223)
+.++.+....
T Consensus 339 ~~l~~~~~~~ 348 (431)
T 3ht4_A 339 QAIQYASPIN 348 (431)
T ss_dssp HHHHHTSSSS
T ss_pred HHHHhcCccc
Confidence 9998775433
No 22
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.29 E-value=1.9e-11 Score=108.92 Aligned_cols=107 Identities=13% Similarity=0.089 Sum_probs=85.4
Q ss_pred CccccCCEEEEecCCCCC--CCcCcc-cCCCcEEEecc--cccccCCcccceeEEEecChhHHHHHHHHHHh--------
Q 027424 1 MAHAHGALLLVDNSIMSP--VLSRPL-ELGADIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~--~~~~pl-~~GADivv~S~--tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~-------- 67 (223)
+|+ +|++|++|++++-+ +..+++ ..++|+++.|+ ||++++ + .||+++.+++++.++++.++..
T Consensus 151 la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~-g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~ 226 (377)
T 3ju7_A 151 LEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGI-G--EGGLIYSKNEEDIQRIKRMGNFGFDTNREC 226 (377)
T ss_dssp HHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCC-B--SCEEEEESCHHHHHHHHHHTBTTBCTTSCB
T ss_pred HHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCC-C--CcEEEEECCHHHHHHHHHHHhcCCCCCCce
Confidence 478 99999999997544 333344 33489999995 799997 4 5888888888888777665431
Q ss_pred ----cCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 68 ----EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 68 ----~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.+..+++..+++.+..++++..++++..+|+..++++|+++|.+
T Consensus 227 ~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~~~~~L~~~~~~ 274 (377)
T 3ju7_A 227 TMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEWYKQLLQSNGLM 274 (377)
T ss_dssp CSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred eeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 23458899999999999999999999999999999999999865
No 23
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.24 E-value=4.7e-10 Score=96.97 Aligned_cols=178 Identities=15% Similarity=0.122 Sum_probs=107.2
Q ss_pred Ccccc-CCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-------------
Q 027424 1 MAHAH-GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN------------- 66 (223)
Q Consensus 1 ia~~~-g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~------------- 66 (223)
+|+++ |+++++|++++.+...-++.. +|+++.|.||+++|+.. .|+++.+ +++.+++.....
T Consensus 155 la~~~p~~~li~D~a~~~~~~~~~~~~-~d~~~~s~~K~~~~~~G--~g~~~~~-~~~~~~~~~~~~gg~~~~~~~~~~~ 230 (362)
T 3ffr_A 155 FRDKNKDALIFVDAVSSLPYPKFDWTK-IDSVFFSVQKCFGLPAG--LGVWILN-DRVIEKSKALLAKRKSIGTYHTIPS 230 (362)
T ss_dssp SGGGSTTSEEEEECTTTTTSSCCCTTS-CSEEEEETTSTTCCCSC--CEEEEEE-HHHHHHHHHHHHTTCCCCSTTSHHH
T ss_pred HHHhCCCCEEEEecccccCCcccChhH-CcEEEEecccccCCCCc--eEEEEEC-HHHHHHhhhccccCCCCcccccHHH
Confidence 58999 999999999865432222222 89999999999995432 3556554 455555544332
Q ss_pred --------hcCCCCChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 67 --------AEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 67 --------~~g~~~sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
....+.++...+.+..+++. +..+.++..+++..+.+.|+++|.+ ++..|. +. .
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~----~~--------~ 297 (362)
T 3ffr_A 231 MLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVF-SFGVED----AK--------L 297 (362)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSE-EESSSC----GG--------G
T ss_pred HHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCc-eeccCC----hh--------h
Confidence 00223444444444455553 4566788899999999999999876 333221 10 1
Q ss_pred CCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHH
Q 027424 134 GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 213 (223)
Q Consensus 134 g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~d 213 (223)
..+.+++|.+.+ ...+|.+.|.--.+.++-|. .+ ..++.||||+|....++-++.
T Consensus 298 ~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~g~------~~-----------------~~~~~iRis~~~~~~~e~i~~ 352 (362)
T 3ffr_A 298 RSMTTIVANTTM--LPGEINKILEPFDMAVGAGY------GS-----------------KKETQIRIANFPAHSLEQVHK 352 (362)
T ss_dssp BCSSEEEEEESS--CHHHHHHHHGGGTEEEEECS------GG-----------------GTTTEEEEECCTTSCHHHHHH
T ss_pred cCCceEEEecCC--CHHHHHHHHHHCCeEEecCc------cc-----------------cCCCEEEEECCCCCCHHHHHH
Confidence 246788888854 33444444432222222120 00 135789999998766666666
Q ss_pred HHHHHhc
Q 027424 214 LDKALRT 220 (223)
Q Consensus 214 l~~Al~~ 220 (223)
+.++|+.
T Consensus 353 l~~~l~~ 359 (362)
T 3ffr_A 353 LVQTLKE 359 (362)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666653
No 24
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.24 E-value=1.3e-10 Score=101.00 Aligned_cols=175 Identities=13% Similarity=0.099 Sum_probs=109.5
Q ss_pred CccccCCEEEEecCCCCCCC---cCcccC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL---SRPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~---~~pl~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|++++.... ..++.. +..+++.|++|.++..+..+|. ++..++++.+.+...... .+.+
T Consensus 172 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~-~~~~~~~~~~~~~~~~~~--~~~~ 248 (361)
T 3ftb_A 172 LAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGY-GITNNKEIAAKIKAKQNP--WNIN 248 (361)
T ss_dssp HHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEE-EEESCHHHHHHHHTTSCT--TCSC
T ss_pred HhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeE-EEeCCHHHHHHHHhhCCC--CCCC
Confidence 36799999999999853222 233332 3458899999999766666554 544566676665543222 2456
Q ss_pred hHhHHHHHhcHH---HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC--CHHH
Q 027424 74 PFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLAL 148 (223)
Q Consensus 74 p~da~ll~~~l~---tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~--~~~~ 148 (223)
+...+.+...++ .+..+.++..++...+.+.|+++|.+..+..| .|+++.|.+. +.+.
T Consensus 249 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~ 311 (361)
T 3ftb_A 249 CFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSP-----------------HANFVLCRLENISGEK 311 (361)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECC-----------------SSSEEEEEESSSCHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCC-----------------CCeEEEEEcCCCCHHH
Confidence 666666655554 35666788889999999999999887535433 4667778874 2322
Q ss_pred -HHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCC-HHHHHHHHHHHHhc
Q 027424 149 -SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDKALRT 220 (223)
Q Consensus 149 -~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd-~~dL~~dl~~Al~~ 220 (223)
.+++.++ ++. ++-|.... +..++.+|+|++.++ .++|++.|++.++.
T Consensus 312 l~~~l~~~-gi~---v~~g~~~~---------------------~~~~~~iRis~~~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 312 LYDSLLKE-DIV---IRRCCNFI---------------------GLDDSFVRFAIKDEKKNTKFLRALKGVENN 360 (361)
T ss_dssp HHHHHHTT-TEE---CEECTTST---------------------TCCTTEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHC-CeE---EeeCccCC---------------------CCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 2333332 332 12121100 124688999999654 47788888776653
No 25
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.23 E-value=6.7e-12 Score=116.03 Aligned_cols=178 Identities=16% Similarity=0.115 Sum_probs=106.2
Q ss_pred cccc------CCEEEEecCCCCC---CCcCccc-----CCCcEEEecccccccCCcccceeEEEecChhHH-HHHHHHHH
Q 027424 2 AHAH------GALLLVDNSIMSP---VLSRPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQN 66 (223)
Q Consensus 2 a~~~------g~~lvVDnT~~s~---~~~~pl~-----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~-~~l~~~~~ 66 (223)
|+++ |++++||++++.. +....+. .|+|+++.|.|||+.++... |++++++++.. +.+.....
T Consensus 228 a~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~--G~~~~~~~~~l~~~~~~~~~ 305 (502)
T 3hbx_A 228 LVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI--GWVIWRNKEDLPEELIFHIN 305 (502)
T ss_dssp HHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSC--EEEEESSGGGSCGGGCEEEC
T ss_pred HHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCe--EEEEEeCHHHhhHHhccCcc
Confidence 5666 9999999999732 2222222 38999999999999776543 55556654432 11111011
Q ss_pred hcCCC---------C---ChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh
Q 027424 67 AEGSG---------L---APFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 67 ~~g~~---------~---sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~ 132 (223)
++|.. . .....|..++ +.+.+..++++..+++..++++|+++|.++- ..|+ |
T Consensus 306 yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~----~--------- 371 (502)
T 3hbx_A 306 YLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNI-VSKD----E--------- 371 (502)
T ss_dssp SSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEE-CSCS----S---------
T ss_pred cccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE-EeCC----C---------
Confidence 11111 1 1122333344 4566788999999999999999999997643 3331 1
Q ss_pred CCCCeeEEEEeCC-----HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----
Q 027424 133 KGAGSVLSFLTGS-----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---- 203 (223)
Q Consensus 133 ~g~ggl~sf~~~~-----~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG---- 203 (223)
..++++|.+.+ .....+.+..-+++-.+ ...|.... ....+|++|+
T Consensus 372 --~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~---------~~~p~~~~--------------~~~~lRisv~~~~t 426 (502)
T 3hbx_A 372 --GVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPA---------YTMPPNAQ--------------HITVLRVVIREDFS 426 (502)
T ss_dssp --SSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCE---------EECCTTCT--------------TCEEEEEECCTTCC
T ss_pred --CceEEEEEecCCCcCCHHHHHHHHHhCCcEEee---------ccCCcccC--------------CceEEEEEeCCCCC
Confidence 34689998832 11233333332332100 01121100 2468999999
Q ss_pred CCCHHHHHHHHHHHHhc
Q 027424 204 IEDVNDLISDLDKALRT 220 (223)
Q Consensus 204 lEd~~dL~~dl~~Al~~ 220 (223)
.||.++|+++|+++++.
T Consensus 427 ~edid~li~~L~~~l~~ 443 (502)
T 3hbx_A 427 RTLAERLVIDIEKVMRE 443 (502)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78899999999999863
No 26
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.19 E-value=2.4e-10 Score=99.82 Aligned_cols=176 Identities=17% Similarity=0.183 Sum_probs=107.2
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHH----------------H
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY----------------F 63 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~----------------~ 63 (223)
+|+++|+++++|++++.+.. .+..++|+|+++.|++|+++++.. .|++++++ ++.+++. .
T Consensus 171 l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 247 (386)
T 2dr1_A 171 VAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPG--LAIGAFSE-RFLEIAEKMPERGWYFDIPLYVKY 247 (386)
T ss_dssp HHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSS--CEEEEECH-HHHHHHTTCTTCCSTTCHHHHHHH
T ss_pred HHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCc--eEEEEECH-HHHHHHhcCCCCceEEeHHHHHHh
Confidence 47899999999999865432 233346899999999999997632 47776654 5555441 1
Q ss_pred HH--HhcCCCCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCC
Q 027424 64 LQ--NAEGSGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 135 (223)
Q Consensus 64 ~~--~~~g~~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ 135 (223)
.. .....+.++...+.+...++.+ ..+.++..+++..+.+.|++. .+ ++..| +. ...
T Consensus 248 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~-----~~--------~~~ 312 (386)
T 2dr1_A 248 LKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GL-DILAE-----PG--------HES 312 (386)
T ss_dssp HHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TC-CBSSC-----TT--------CBC
T ss_pred hccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eeCcC-----cc--------ccC
Confidence 11 1222245665565666666653 345677888899999999887 43 22222 00 015
Q ss_pred CeeEEEEeCCHHHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHH
Q 027424 136 GSVLSFLTGSLALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVN 208 (223)
Q Consensus 136 ggl~sf~~~~~~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~ 208 (223)
+.+++|.+.......+|.+.| ++. +.-|.. + ..++.+|||++. |+.+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~l~~~gi~---v~~~~~------~-----------------~~~~~iRi~~~~~~~~~~i~ 366 (386)
T 2dr1_A 313 PTITAVLTPPGIKGDEVYEAMRKRGFE---LAKGYG------S-----------------VKEKTFRIGHMGYMKFEDIQ 366 (386)
T ss_dssp SSEEEEECCTTCCHHHHHHHHHHTTEE---CEECCG------G-----------------GTTTEEEEECCSSCCHHHHH
T ss_pred CceEEEEcCCCCCHHHHHHHHHHCCeE---EecCcc------c-----------------cCCCEEEEECCCCCCHHHHH
Confidence 788889874211122333333 332 221210 0 035689999995 5677
Q ss_pred HHHHHHHHHHhc
Q 027424 209 DLISDLDKALRT 220 (223)
Q Consensus 209 dL~~dl~~Al~~ 220 (223)
.+++.|+++++.
T Consensus 367 ~~~~~l~~~~~~ 378 (386)
T 2dr1_A 367 EMLDNLREVINE 378 (386)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 778888777763
No 27
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.16 E-value=7.6e-10 Score=97.73 Aligned_cols=178 Identities=14% Similarity=0.157 Sum_probs=111.8
Q ss_pred CccccCCEEEEecCCCCCCCc---------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--HhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~---------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~--~~~g 69 (223)
+|+++|+++|+|++++.++.. -.+..++|+++.|++|+++|.. ||+++++ +++.+.+.... ....
T Consensus 202 l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~---gG~~~~~-~~~~~~l~~~~~~~~~~ 277 (401)
T 1fc4_A 202 LADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGAS---GGYTAAR-KEVVEWLRQRSRPYLFS 277 (401)
T ss_dssp HHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSS---CEEEEEC-HHHHHHHHHHCHHHHHS
T ss_pred HHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCC---CEEEEcC-HHHHHHHHHhCcCceeC
Confidence 478999999999999755431 1123368999999999995432 5878764 56666665432 1224
Q ss_pred CCCChHhHHHHHhcHHHHH---HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 70 SGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl~---~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
.+.++...+.+...++.+. .+.++..++...+.+.|++. .+. +. | +.|+++.|++.+.
T Consensus 278 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~----------------~~~~~~~~~~~~~ 338 (401)
T 1fc4_A 278 NSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFT-LA-G----------------ADHAIIPVMLGDA 338 (401)
T ss_dssp CCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCC-BC-C----------------SSSSEEEEEEECH
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCc-cc-C----------------CCCCEEEEEcCCh
Confidence 4678887888888888763 56688888999999999887 332 21 3 2578888888543
Q ss_pred HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC----CHHHHHHHHHHHHhcC
Q 027424 147 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE----DVNDLISDLDKALRTG 221 (223)
Q Consensus 147 ~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE----d~~dL~~dl~~Al~~~ 221 (223)
....+|.+.|.--.+.+.-|... ..+ -.++.+|||++.. +.+.+++.|+++++..
T Consensus 339 ~~~~~l~~~l~~~gi~v~~~~~~------------~~~--------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 339 VVAQKFARELQKEGIYVTGFFYP------------VVP--------KGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp HHHHHHHHHHHHTTEECCEECTT------------SSC--------TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCcEEeeecCC------------CCC--------CCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 34445554442111212212111 000 0246899999943 4566677777776643
No 28
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.16 E-value=6.8e-10 Score=97.41 Aligned_cols=198 Identities=12% Similarity=0.073 Sum_probs=121.9
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCC--cEEEecc--cccccCCcccceeEEEecChhHHHHHHHHHHh---------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GA--Divv~S~--tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--------- 67 (223)
+|+++|+++|+|++++.+...+.-..|. |+++.|+ +|.+++.++ +|+++.+++++.++++..+..
T Consensus 145 la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~l~~~g~--gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~ 222 (367)
T 3nyt_A 145 IASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAPLGCYGD--GGAIFTNDDELATAIRQIARHGQDRRYHHI 222 (367)
T ss_dssp HHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEEC
T ss_pred HHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCCCcCCCcCc--eeEEEeCCHHHHHHHHHHHhcCCCcCceee
Confidence 4789999999999986544334334444 9999996 999998665 888888777777776654321
Q ss_pred ---cCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 68 ---EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 68 ---~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
....+++..+.+.+..++.+..+.++..+++..+.+.|++.+ + ..|..+... .....++.+.+.
T Consensus 223 ~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~-~---~~~~~~~~~---------~~~~~~~~~~~~ 289 (367)
T 3nyt_A 223 RVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQVG-I---GTPFIEVNN---------ISVYAQYTVRMD 289 (367)
T ss_dssp SCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTT-C---CCCCCCTTE---------ECCCSSEEEECS
T ss_pred ccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-e---eccCCCCCC---------ceeeEEEEEEeC
Confidence 134578888888888899888888999999999999999875 2 123211110 012234555555
Q ss_pred CHHHHHHHHhhcCcceeccccCCCCCCCCCCccc-cCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 145 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFM-SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 145 ~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~-~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
+.+...+.+..-++. ..+.+. ..+-..|... ....++..++. ....|||+++-.-.++=++.+.+++++
T Consensus 290 ~~~~l~~~L~~~GI~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 290 NRESVQASLKAAGVP-TAVHYP--IPLNKQPAVADEKAKLPVGDKA----ATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp SHHHHHHHHHHHTCC-CBCSCS--SCGGGSGGGCCTTCCCHHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHCCCc-eeccCC--CccccChhhhccCCCChHHHHH----HhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 555555555544443 222222 1111122221 12223222221 346799999977665556666666654
No 29
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.16 E-value=3.3e-10 Score=98.76 Aligned_cols=178 Identities=15% Similarity=0.125 Sum_probs=104.7
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHH-------------HHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL-------------YFLQN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l-------------~~~~~ 66 (223)
+|+++|+++|+|++++.+.. ...-++|+|+++.|++|+++|... .|++++++ ++.+++ ..+..
T Consensus 152 l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 228 (384)
T 3zrp_A 152 KIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAG--LGLLLLSP-KALSILDSQNSIAGYYLDLRNWLP 228 (384)
T ss_dssp HHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSS--EEEEEECH-HHHHHHHHCCCSCCSTTCHHHHHH
T ss_pred HHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCc--eEEEEECH-HHHHHhcCCCCCCcccccHHHHHH
Confidence 47999999999999875543 233346899999999999976532 56666654 454544 22211
Q ss_pred ---h----cC---CCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhh
Q 027424 67 ---A----EG---SGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 131 (223)
Q Consensus 67 ---~----~g---~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~ 131 (223)
. .+ .+.++.....+..+++.+ ..+.++..+++..+.+.|+++ .+ ++..|. +
T Consensus 229 ~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~----~-------- 294 (384)
T 3zrp_A 229 VMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GL-EIVARR----P-------- 294 (384)
T ss_dssp HHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC-CBSCSS----G--------
T ss_pred HHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CC-eEccCc----c--------
Confidence 1 00 134554444455566543 344577778888888999887 43 222221 0
Q ss_pred hCCCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCH
Q 027424 132 AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDV 207 (223)
Q Consensus 132 ~~g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~ 207 (223)
....+.++.|.+.+ ....+|.+.+.--.+.++-|. +.. . +.+|||++ .||.
T Consensus 295 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~------------~~~-----------~-~~iRi~~~~~~~~e~i 349 (384)
T 3zrp_A 295 ESYSNTVTGVILKV-ADPQKVLAGTVNEGVEFAPGV------------HPA-----------F-KYFRIGHMGWVTPNDA 349 (384)
T ss_dssp GGBCSSEEEEECSS-SCHHHHHHHHHTTTCCCEECC------------CTT-----------C-CEEEEECCSSCCHHHH
T ss_pred cccCccEEEEECCC-CCHHHHHHHHHHCCEEEecCC------------CCC-----------c-CEEEEeccccCCHHHH
Confidence 12256788888743 122333333321111122221 000 0 78999999 5678
Q ss_pred HHHHHHHHHHHhc
Q 027424 208 NDLISDLDKALRT 220 (223)
Q Consensus 208 ~dL~~dl~~Al~~ 220 (223)
+.+++.|+++++.
T Consensus 350 ~~~~~~l~~~l~~ 362 (384)
T 3zrp_A 350 IIAISVIERTLRK 362 (384)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888888864
No 30
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.15 E-value=2.4e-10 Score=100.07 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=76.3
Q ss_pred CccccCCEEEEecCCCCCCCcCccc-----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~-----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|++++..... ++. .+.++++.|++|.++.++..+|. +++ ++++.+.+.......+.+.++.
T Consensus 182 la~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-v~~-~~~l~~~~~~~~~~~~~~~~~~ 258 (375)
T 3op7_A 182 IASEVGAYILSDEVYRSFSEL-DVPSIIEVYDKGIAVNSLSKTYSLPGIRIGW-VAA-NHQVTDILRDYRDYTMICAGVF 258 (375)
T ss_dssp HHHTTTCEEEEECCSCCCSSS-CCCCHHHHCTTEEEEEESSSSSSCGGGCCEE-EEC-CHHHHHHHTTTGGGTTSCCCHH
T ss_pred HHHHcCCEEEEEccccccccc-CCCchhhhcCCEEEEeEChhhcCCcccceEE-EEe-CHHHHHHHHHHHhhhccCCCcH
Confidence 478999999999998653221 111 34569999999999866765554 545 6677777765555555566787
Q ss_pred hHHHHHhcHHHHHHH----HHHHHhHHHHHHHHHhcCCCee
Q 027424 76 DCWICLRGVKTMALR----VEKQQDNAQKIAEFLASHPRVK 112 (223)
Q Consensus 76 da~ll~~~l~tl~~R----~~~~~~na~~la~~L~~~p~v~ 112 (223)
..+.+...++..... .++..+++..+.++|+++|.+.
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 299 (375)
T 3op7_A 259 DDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVS 299 (375)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 777777777654322 3445788899999999988773
No 31
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.14 E-value=6.3e-10 Score=98.25 Aligned_cols=186 Identities=16% Similarity=0.153 Sum_probs=107.0
Q ss_pred CccccCCEEEEecCCCCCCCc-CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA------------ 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~------------ 67 (223)
+|+++|+++|+|++++.+... +.-++|+|+++.|++|.+++.+ +|+++++ +++.+++......
T Consensus 194 l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~g---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (420)
T 1t3i_A 194 LAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTG---IGFLYGK-EEILEAMPPFFGGGEMIAEVFFDHF 269 (420)
T ss_dssp HHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTT---CEEEEEC-HHHHHHSCCCSCSTTSEEEECSSCE
T ss_pred HHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhcCCCc---eEEEEEc-hHHHhhcCceecCCCcccccccccc
Confidence 478999999999998755432 3334689999999999887655 6777665 4555544322110
Q ss_pred --------cCCCCChHhHHHHHh-cHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 68 --------EGSGLAPFDCWICLR-GVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 68 --------~g~~~sp~da~ll~~-~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
+....++..+...+. +++.+ ..+.++..+++..+.+.|++.|.+ ++..|..+. .
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~~~~-----------~ 337 (420)
T 1t3i_A 270 TTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQL-RLYGPNPKH-----------G 337 (420)
T ss_dssp EECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTE-EEESCCGGG-----------S
T ss_pred CCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCe-EEeCCCccc-----------c
Confidence 111234444444333 45543 345577788999999999998876 455442100 0
Q ss_pred CCCeeEEEEeCC--HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC----CH
Q 027424 134 GAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE----DV 207 (223)
Q Consensus 134 g~ggl~sf~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE----d~ 207 (223)
+.|+++.|.+.+ .+...+.+..-++. +.-|.. +. .......|. ++.+|||++.. |.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~---v~~~~~------~~--------~~~~~~~g~-~~~iRis~~~~~~~~~i 399 (420)
T 1t3i_A 338 DRAALASFNVAGLHASDVATMVDQDGIA---IRSGHH------CT--------QPLHRLFDA-SGSARASLYFYNTKEEI 399 (420)
T ss_dssp CBCSEEEEEETTBCHHHHHHHHHTTTEE---CBCSCT------TC--------HHHHHHTTC-CCCEEEECCTTCCHHHH
T ss_pred ccCCEEEEEECCCCHHHHHHHHHHCCeE---Eeeccc------cc--------hHHHHhcCC-CCeEEEecCCCCCHHHH
Confidence 358899998842 23232333332322 222211 10 111112332 67899999974 45
Q ss_pred HHHHHHHHHHHhc
Q 027424 208 NDLISDLDKALRT 220 (223)
Q Consensus 208 ~dL~~dl~~Al~~ 220 (223)
+.+++-|+++++.
T Consensus 400 ~~~~~~l~~~~~~ 412 (420)
T 1t3i_A 400 DLFLQSLQATIRF 412 (420)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5566666666543
No 32
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.14 E-value=5e-10 Score=98.14 Aligned_cols=110 Identities=16% Similarity=0.110 Sum_probs=75.2
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccCC---Cc--EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC-
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLELG---AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG- 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~G---AD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g- 69 (223)
+|+++|+++|+|++++.... .....++ .| +++.|++|.++..+..+ |+++++++++.+.+.......+
T Consensus 188 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
T 3dzz_A 188 LCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHA-ACAIIPNPDLRARAEESFFLAGI 266 (391)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCC-EEEECCSHHHHHHHHHHHHHHTC
T ss_pred HHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhh-eEEEECCHHHHHHHHHHHHhhcc
Confidence 47899999999999863221 1122233 67 99999999997566555 5565655677777765543333
Q ss_pred CCCChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhc-CCCe
Q 027424 70 SGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRV 111 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~-~p~v 111 (223)
.+.++...+.+...++. +..+.++..+++..+.+.|++ .|.+
T Consensus 267 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 313 (391)
T 3dzz_A 267 GEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEV 313 (391)
T ss_dssp SSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 24566656666666655 556667888899999999998 6776
No 33
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.14 E-value=4.4e-10 Score=98.12 Aligned_cols=172 Identities=16% Similarity=0.182 Sum_probs=106.1
Q ss_pred Ccccc--CCEEEEecCCCCCCCcCc----ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAH--GALLLVDNSIMSPVLSRP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~--g~~lvVDnT~~s~~~~~p----l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++ |+++|+|++++......+ -..+.++++.|++|+ +..+..+ |+++. ++++.+.+..... ....++
T Consensus 185 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~-G~~~~-~~~~~~~~~~~~~--~~~~~~ 259 (367)
T 3euc_A 185 AAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRL-GYVAG-DPQWLEQLDKVRP--PYNVNV 259 (367)
T ss_dssp HTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCE-EEEEE-CHHHHHHHGGGCC--SSCCCH
T ss_pred hhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCc-eeeee-CHHHHHHHHHhCC--CCCCCH
Confidence 37889 999999999864322121 123556999999999 6555444 55655 4556555543322 223567
Q ss_pred HhHHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHH
Q 027424 75 FDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKH 151 (223)
Q Consensus 75 ~da~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~ 151 (223)
...+.+...++. +..+.++..++...+.+.|+++|.+. + +|+ .|..+.+.+.+.+...+
T Consensus 260 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~----------------~~~~~~~~~~~~~~l~~ 321 (367)
T 3euc_A 260 LTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-FPS----------------AANFLLARVPDAAQTFD 321 (367)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-CCC----------------SSSEEEEECSCHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCC----------------CCeEEEEECCCHHHHHH
Confidence 666666666554 56667888899999999999998875 3 441 35566677753333333
Q ss_pred HHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 027424 152 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 219 (223)
Q Consensus 152 f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-Ed~~dL~~dl~~Al~ 219 (223)
.+..-++. ++-|+... +..++.+|||+|- ||.+.+++.|+++++
T Consensus 322 ~l~~~gi~---v~~~~~~~---------------------~~~~~~iRis~~~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 322 RLLARKVL---IKNVSKMH---------------------PLLANCLRVTVSTPEENAQFLEAFAASLQ 366 (367)
T ss_dssp HHHTTTEE---CEECGGGC---------------------GGGTTEEEEECCCHHHHHHHHHHHHHHTC
T ss_pred HHHHCCeE---EEECCccC---------------------CCCCCEEEEecCCHHHHHHHHHHHHHHhc
Confidence 33333332 22121100 1135789999995 457777888877764
No 34
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.12 E-value=1.3e-09 Score=95.65 Aligned_cols=199 Identities=14% Similarity=0.110 Sum_probs=118.5
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCC--CcEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHhc--------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-------- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~G--ADivv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~-------- 68 (223)
+|+++|+++++|++++.+...+.-..| +|+++.|++ |.++|++. ||+++.+++++.++++......
T Consensus 146 l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~l~~~g~--gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 223 (373)
T 3frk_A 146 IAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPAKNLGSLGD--GGAVVTNDKDLAEKIKALSNYGSEKKYHHI 223 (373)
T ss_dssp HHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSS--CEEEEESCHHHHHHHHHHHBTTCSBTTBCC
T ss_pred HHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcCCCccCccce--eEEEEeCCHHHHHHHHHHHhcCcccCCccc
Confidence 478999999999998755433433445 899999955 99997654 8888888777777666544311
Q ss_pred ----CCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 69 ----GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 69 ----g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
...+++..+.+.+..++.+..+.++..+++..+.+.|++.+ + . .|..+... ...--.+.+...
T Consensus 224 ~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~--~~~~~~~~---------~~~~~~~~~~~~ 290 (373)
T 3frk_A 224 YKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-V-I--IPVEADYA---------KHVWYTFVIRSE 290 (373)
T ss_dssp SCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-E-E--CCCCCTTE---------ECCCSSEEEEES
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-e-E--eccCCCCC---------ceeeEEEEEEeC
Confidence 12257777777777777788888888999999999998877 3 2 34322110 011123444444
Q ss_pred CHHHHHHHHhhcCcceeccccCCCCCCCCCCcccc--C--CCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHhc
Q 027424 145 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS--H--ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 220 (223)
Q Consensus 145 ~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~--h--~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~~ 220 (223)
+.+...+.+..-++. ..+.+ ...+-+.|.... + ..++..++. ..+.||||++....++=++.+.++|+.
T Consensus 291 ~~~~l~~~L~~~gI~-v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lrl~~~~~~t~~di~~~~~~l~~ 363 (373)
T 3frk_A 291 KRDELQKYLNNNGIG-TLIHY--PIPIHLQQAYKDLGFKTGNFPIAEKI----ANEILSIPIWYGMKNEEIEYVIDKINA 363 (373)
T ss_dssp SHHHHHHHHHHTTBC-CBCSC--SSCGGGSGGGGGGCCCTTSSHHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHCCCC-cccCc--CCccccChHHHhcCCCCCCCHHHHHH----HhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 444444445444443 22222 111111222111 0 011111111 236899999988766666667777765
Q ss_pred C
Q 027424 221 G 221 (223)
Q Consensus 221 ~ 221 (223)
.
T Consensus 364 ~ 364 (373)
T 3frk_A 364 W 364 (373)
T ss_dssp C
T ss_pred H
Confidence 4
No 35
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.12 E-value=4.3e-10 Score=98.34 Aligned_cols=174 Identities=14% Similarity=0.150 Sum_probs=106.1
Q ss_pred CccccCCEEEEecCCCCCCC--cCccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVL--SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~--~~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|++++.... ..+++ .+.|+++.|++|+++..+..+ |++++.++++.+.+..... ..+.++
T Consensus 174 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~l~~~~~--~~~~~~ 250 (364)
T 1lc5_A 174 RCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRL-GYLVNSDDAAMARMRRQQM--PWSVNA 250 (364)
T ss_dssp HHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCC-EEEECCCHHHHHHHHHHSC--TTCSCH
T ss_pred HhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccce-EEEEECCHHHHHHHHHhCC--CCCCCH
Confidence 37889999999999854321 12222 468999999999998666555 5565245567666654432 234677
Q ss_pred HhHHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH--HHH
Q 027424 75 FDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALS 149 (223)
Q Consensus 75 ~da~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~--~~~ 149 (223)
...+.+.+.|+. +..+.++..++...+.+.|+++|.+. + +|+ .|+.+.+++.+. +..
T Consensus 251 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~----------------~g~~~~~~~~~~~~~l~ 312 (364)
T 1lc5_A 251 LAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLT-V-YPG----------------RANYLLLRCEREDIDLQ 312 (364)
T ss_dssp HHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCC----------------SSSEEEEEESCTTCCHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCE-E-CCC----------------CCeEEEEECCCcHHHHH
Confidence 777777777654 44555677788889999999888763 3 341 356677777421 222
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHhc
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-DVNDLISDLDKALRT 220 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE-d~~dL~~dl~~Al~~ 220 (223)
+++.++ ++. +.-|.... +..++.+|||++-+ +.+.|++-|++.++.
T Consensus 313 ~~l~~~-gi~---v~~g~~~~---------------------~~~~~~iRis~~~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 313 RRLLTQ-RIL---IRSCANYP---------------------GLDSRYYRVAIRSAAQNERLLAALRNVLTG 359 (364)
T ss_dssp HHHHTT-TEE---CEECTTST---------------------TCCTTEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred HHHHHC-CcE---EeeCcccC---------------------CCCCCEEEEEeCCHHHHHHHHHHHHHHhhc
Confidence 333222 332 11111100 11357899999953 456677777776653
No 36
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.12 E-value=1e-10 Score=101.57 Aligned_cols=191 Identities=16% Similarity=0.133 Sum_probs=105.8
Q ss_pred CccccCCEEEEecCCCCCCCc-CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH----HHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----LQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~----~~~~~g~~~sp~ 75 (223)
+|+++|+ +++|++++.+... ..-..|+|+++.|+||++++.+ + |+++++++........ .......+.++.
T Consensus 163 l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g--~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (382)
T 4hvk_A 163 VLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKG--V-GALWIRKEAKLQPVILGGGQENGLRSGSENVP 238 (382)
T ss_dssp HHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTT--C-EEEEEETTCCCCCSSCSSCTGGGTSCSCCCHH
T ss_pred HHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCc--e-EEEEEcCccCcCcccccCCCcCccccCCcCHH
Confidence 4789999 9999998765432 2223589999999999876544 3 4455554321000000 001112234554
Q ss_pred hHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC--CHHHH
Q 027424 76 DCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLALS 149 (223)
Q Consensus 76 da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~--~~~~~ 149 (223)
..+.+..+++.+ ..+.++..+++..+.+.|++.|.+ ++..|. ..+.++++.|.+. +.+..
T Consensus 239 ~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 304 (382)
T 4hvk_A 239 SIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEES-YLNGHP-------------EKRLPNNVNVRFSYIEGESI 304 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE-EECSCS-------------SSBCTTEEEEEETTCCHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCe-EEeCCc-------------cccCCCEEEEEECCCCHHHH
Confidence 455555555543 344567777888888888888876 344331 1224568888873 33333
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC----CCeEEEEec----CCCHHHHHHHHHHHHhc
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVG----IEDVNDLISDLDKALRT 220 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~----~~liRlsvG----lEd~~dL~~dl~~Al~~ 220 (223)
.+.+..-+ +.++.|...+.... .+.......|++ ++.||||+| .||.+.+++.|+++++.
T Consensus 305 ~~~l~~~g---i~v~~g~~~~~~~~--------~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~ 372 (382)
T 4hvk_A 305 VLSLDMAG---IQASTGSACSSKTL--------QPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp HHHHHHTT---CBCBCC----------------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCC---EEEeeCCccCCCCC--------cchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 33333333 33444433221100 011122344544 689999999 46678888888887763
No 37
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.12 E-value=7.9e-10 Score=97.11 Aligned_cols=179 Identities=15% Similarity=0.164 Sum_probs=110.6
Q ss_pred CccccCCEEEEecCCCCCCCcC---c-cc-----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-H-hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR---P-LE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-N-AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~---p-l~-----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-~-~~g 69 (223)
+|+++|+++|+|++++..+... + ++ .+.|+++.|++|.++|. .||+++.+ +++.+.+.... . ...
T Consensus 200 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~---~gG~~~~~-~~~~~~~~~~~~~~~~~ 275 (399)
T 3tqx_A 200 LADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGA---SGGYTSGH-KEIIEWLRNRSRPYLFS 275 (399)
T ss_dssp HHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSS---CCEEEEEC-HHHHHHHHHHCHHHHSS
T ss_pred HHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccC---ceEEEEcC-HHHHHHHHHhCcceecc
Confidence 4789999999999996544211 1 11 26799999999999953 35877665 45666665431 1 234
Q ss_pred CCCChHhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC
Q 027424 70 SGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 145 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~ 145 (223)
.+.++..+..+...++.+ ....++..++...+.+.|++.. + ++. | ..|+++.|.+.+
T Consensus 276 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~-~----------------~~~~~~~~~~~~ 336 (399)
T 3tqx_A 276 NTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLG-F-QLV-P----------------GNHPIIPVMLGD 336 (399)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-C-CBC-C----------------CSSSEEEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-C-CcC-C----------------CCCCEEEEEeCC
Confidence 467777777777777765 3445777888888888888762 2 111 1 257788888855
Q ss_pred HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhcC
Q 027424 146 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 221 (223)
Q Consensus 146 ~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~Al~~~ 221 (223)
.....+|.+.|.--.+.+.-+. .|. . .-.++.+|||++ .|+.+.+++.|+++++..
T Consensus 337 ~~~~~~~~~~l~~~gi~v~~~~------~~~------~--------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 337 AQLATNMADHLLQEGIYVVGFS------YPV------V--------PMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp HHHHHHHHHHHHHTTEECCEEC------TTT------S--------CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCEEeeeC------CCC------C--------CCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 4444555544421111111110 010 0 013468999997 345677788888887754
Q ss_pred C
Q 027424 222 P 222 (223)
Q Consensus 222 ~ 222 (223)
.
T Consensus 397 ~ 397 (399)
T 3tqx_A 397 G 397 (399)
T ss_dssp T
T ss_pred c
Confidence 3
No 38
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.11 E-value=2.5e-10 Score=101.34 Aligned_cols=191 Identities=19% Similarity=0.184 Sum_probs=108.9
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-------HhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-------~~~g~~~ 72 (223)
+|+++|++||+|++++.+.. .....+|+|+++.|++|.+++.+ .|+++++++.. +.+.... .....+.
T Consensus 188 l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g---~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 263 (423)
T 3lvm_A 188 MCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKG---IGALYVRRKPR-VRIEAQMHGGGHERGMRSGTL 263 (423)
T ss_dssp HHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSS---CEEEEECBTTB-CCCCCSSCSSCTTTTTCCSCC
T ss_pred HHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCC---eEEEEEecccc-CCCCccccCCcccccccCCCC
Confidence 47899999999999876644 44456789999999999887655 45565654322 2221110 0111233
Q ss_pred ChHhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHH
Q 027424 73 APFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL 148 (223)
Q Consensus 73 sp~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~ 148 (223)
++.....+...++.+ ....++..+++..+.+.|++.|.+. +.-|. ....++++.|.+.+. .
T Consensus 264 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~~-~ 328 (423)
T 3lvm_A 264 PVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVY-LNGDL-------------EHGAPNILNVSFNYV-E 328 (423)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEE-EESCS-------------TTBCTTEEEEEETTS-C
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCc-------------cccCCCeEEEEeCCC-C
Confidence 444444444455443 4445777888888999998888763 33221 012467888887321 1
Q ss_pred HHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC----CCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 149 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 149 ~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~----~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
...+.+.+.- +.++-|...+ +. +. .+.......|++ ++.||||++. ||.+.+++.|+++++.
T Consensus 329 ~~~l~~~l~~--i~v~~g~~~~----~~---~~-~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~ 398 (423)
T 3lvm_A 329 GESLIMALKD--LAVSSGSACT----SA---SL-EPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGR 398 (423)
T ss_dssp HHHHHHHTTT--EECBCCCC------------C-CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhh--heeccCcccc----CC---Cc-cccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2334444433 3334342211 10 00 001122345555 4899999994 5677778888777753
No 39
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.11 E-value=1e-09 Score=98.60 Aligned_cols=178 Identities=15% Similarity=0.179 Sum_probs=110.8
Q ss_pred CccccCCEEEEecCCCCCCCc---------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-H-HhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-Q-NAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~---------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-~-~~~g 69 (223)
+|+++|+++|+|++++..... -.+..++|+++.|++|.++.. ||++++++ ++.+.+... + ...+
T Consensus 219 l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~----gG~v~~~~-~l~~~l~~~~~~~~~~ 293 (427)
T 2w8t_A 219 VAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTV----GGFVVSNH-PKFEAVRLACRPYIFT 293 (427)
T ss_dssp HHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSC----CEEEEECC-TTGGGGGGTCHHHHSS
T ss_pred HHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccC----CCEEEeCH-HHHHHHHHhccccccc
Confidence 478999999999998765432 112336899999999999743 58887765 454444322 1 1234
Q ss_pred CCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
.+.+|..+..+...++.+ ..+.++..++...+.+.|++. ++ .+..|+ +.|+++.|.+++.
T Consensus 294 ~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~---------------~~~~~~~~~~~~~ 356 (427)
T 2w8t_A 294 ASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM-GF-RLGTET---------------CDSAIVAVMLEDQ 356 (427)
T ss_dssp CCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH-TC-EESCSS---------------CCSSEEEEEESSH
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CC-cccCCC---------------CCCCEEEEEECCH
Confidence 467787666666777776 566788888999999999876 33 222121 1467899998654
Q ss_pred HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 147 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 147 ~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
....+|.+.|.--.+.+.-|.. |. .+ -..+.+|||++. |+.+.+++-|+++++.
T Consensus 357 ~~~~~l~~~L~~~Gi~v~~~~~------~~------~~--------~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 357 EQAAMMWQALLDGGLYVNMARP------PA------TP--------AGTFLLRCSICAEHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp HHHHHHHHHHHHTTEECEEECT------TT------SC--------TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCeEEeeeCC------CC------CC--------CCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 4455555544211111111111 10 00 024689999997 4566677777776653
No 40
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.11 E-value=4.2e-10 Score=97.77 Aligned_cols=108 Identities=19% Similarity=0.103 Sum_probs=74.5
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC--
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL-- 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~-- 72 (223)
+|+++|++|++|+++.-. ....++..++|+++.|+||+++|+ .||+++ .++++.++++..+...+..+
T Consensus 166 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~---~gg~~~-~~~~l~~~~~~~~~~~~~~~~~ 241 (359)
T 3pj0_A 166 YCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGI---AGAILA-GNDDFVQEAKIWKRRYGGDLIS 241 (359)
T ss_dssp HHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCS---SCEEEE-ECHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCc---ceEEEE-CCHHHHHHHHHHHHHhCCCcch
Confidence 478999999999986421 112234457899999999999876 456664 45677777776555554332
Q ss_pred ChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCee
Q 027424 73 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 112 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~ 112 (223)
...-+......++....++++..+++..+.+.|++.|.+.
T Consensus 242 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 281 (359)
T 3pj0_A 242 LYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSGVK 281 (359)
T ss_dssp CHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHTSTTEE
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCCce
Confidence 2222222334666666778888999999999999998873
No 41
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.09 E-value=3.4e-10 Score=98.33 Aligned_cols=170 Identities=13% Similarity=0.064 Sum_probs=106.2
Q ss_pred CEEEEecCCCCCCCcCc-----c-cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHH
Q 027424 7 ALLLVDNSIMSPVLSRP-----L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 80 (223)
Q Consensus 7 ~~lvVDnT~~s~~~~~p-----l-~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll 80 (223)
.+||+|++++......+ + ..+.++++.|++|+++..+..+|. ++. ++++.+.+..... ....++...+.+
T Consensus 161 ~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~-~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~ 236 (350)
T 3fkd_A 161 TTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGY-IVA-NKDFMKRVAAFST--PWAVNALAIEAA 236 (350)
T ss_dssp SEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEE-EEC-CHHHHHHHHTTCC--TTCSCHHHHHHH
T ss_pred CEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEe-EEe-CHHHHHHHHHhCC--CCCCCHHHHHHH
Confidence 59999999864322111 1 235569999999999866666654 545 5667666654332 224677777777
Q ss_pred HhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcC
Q 027424 81 LRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK 157 (223)
Q Consensus 81 ~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~ 157 (223)
.+.|+. +..|+++..++...+.+.|+++|.+. + +| ..|+.+.+.+... ...+|.+.|.
T Consensus 237 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~----------------~~~~~~~~~~~~~-~~~~l~~~L~ 297 (350)
T 3fkd_A 237 KFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVE-V-HP----------------SGTTFFLLRLKKG-TAAELKKYML 297 (350)
T ss_dssp HHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEE-E-CC----------------CSSSEEEEEESSS-CHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-CC----------------CCCcEEEEECCCC-CHHHHHHHHH
Confidence 777765 34566667799999999999988763 3 34 1456677777421 2334444433
Q ss_pred c-ceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHhc
Q 027424 158 Y-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-DVNDLISDLDKALRT 220 (223)
Q Consensus 158 l-~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE-d~~dL~~dl~~Al~~ 220 (223)
- ..+.++-|.... +..++.+|||+|.+ +.++|++.|++.++.
T Consensus 298 ~~~gi~v~~g~~f~---------------------~~~~~~iRis~~~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 298 EEYNMLIRDASNFR---------------------GLDESYVRITTQRPAQNQLFIKALETFLEK 341 (350)
T ss_dssp HTTCEECEECTTST---------------------TCCTTEEEEECCCHHHHHHHHHHHHHHHTC
T ss_pred HHCCEEEEeCccCC---------------------CCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 2 223333332210 12468899999974 467888888887764
No 42
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.08 E-value=1.6e-09 Score=96.20 Aligned_cols=109 Identities=19% Similarity=0.210 Sum_probs=81.3
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCC--CcEEEecc--cccccCCcccceeEEEecChhHHHHHHHHHHhc--------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-------- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~G--ADivv~S~--tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~-------- 68 (223)
+|+++|+++|+|++++.+...+.-.++ +|+++.|+ +|++++++ .+|+++.+++++.+++.......
T Consensus 173 l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~~~~G--~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 250 (399)
T 2oga_A 173 LADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNLGCFG--DGGAVVTGDPELAERLRMLRNYGSRQKYSHE 250 (399)
T ss_dssp HHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTSSSCCSS--CCEEEEESCHHHHHHHHHHHBTTCSSTTCCC
T ss_pred HHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCccCCcCC--ceEEEEeCCHHHHHHHHHHHhcCcccccccc
Confidence 478899999999999755322322344 79999999 79999877 46777777677777665543321
Q ss_pred --C--CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 69 --G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 69 --g--~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
| ..+++..++.+..+++.+....++..+++..+.+.|++.|.+
T Consensus 251 ~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~ 297 (399)
T 2oga_A 251 TKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGLAGLPGI 297 (399)
T ss_dssp SCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCTTC
T ss_pred ccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 1 245788888888888888877888889999999999988764
No 43
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.08 E-value=1.3e-09 Score=95.53 Aligned_cols=110 Identities=13% Similarity=0.086 Sum_probs=73.8
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-cCCCc-----EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-ELGAD-----IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-~~GAD-----ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
+|+++|+++|+|++++.... ..++ .++.| +++.|++|.++..+..+ |+++.+++++.+.+.......+.
T Consensus 192 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~ 270 (391)
T 4dq6_A 192 ICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQS-SYVVLPDEKDYKLLDDAFTRIDI 270 (391)
T ss_dssp HHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCC-EEEECCSHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccce-EEEEeCCHHHHHHHHHHHHhhcC
Confidence 37899999999999864221 1122 23333 99999999997666555 45556665777777665443332
Q ss_pred -CCChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhc-CCCe
Q 027424 71 -GLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRV 111 (223)
Q Consensus 71 -~~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~-~p~v 111 (223)
+.++.....+...++. +..+.++..++...+.+.|++ .|.+
T Consensus 271 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 317 (391)
T 4dq6_A 271 KRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKL 317 (391)
T ss_dssp CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred CCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 4566666655555554 455567788888999999988 5765
No 44
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.08 E-value=4.8e-10 Score=97.49 Aligned_cols=108 Identities=16% Similarity=0.073 Sum_probs=74.7
Q ss_pred CccccCCEEEEecCCC---C---CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC--
Q 027424 1 MAHAHGALLLVDNSIM---S---PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL-- 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~---s---~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~-- 72 (223)
+|+++|++|++|+++. . +....++..++|+++.|+||+++|.. ||+++. ++++.+.+...+...+..+
T Consensus 164 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~---gg~~~~-~~~~~~~~~~~~~~~~~~~~~ 239 (357)
T 3lws_A 164 YCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIA---GAILAG-PAAFCQTARIWKRRYGGDLIS 239 (357)
T ss_dssp HHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSS---CEEEEE-CHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCc---eEEEEc-CHHHHHHHHHHHHHhcCCccc
Confidence 4789999999999864 1 11122333468999999999997653 476655 5577777766555554332
Q ss_pred ChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCee
Q 027424 73 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 112 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~ 112 (223)
....+.....+++....|+++..+++..+.+.|++.|.+.
T Consensus 240 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 279 (357)
T 3lws_A 240 LYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPGVH 279 (357)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 2222333446677776777888899999999999998873
No 45
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.06 E-value=2.8e-09 Score=92.82 Aligned_cols=165 Identities=16% Similarity=0.227 Sum_probs=100.7
Q ss_pred CCEEEEecCCCCCCC---cCcc----cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHH
Q 027424 6 GALLLVDNSIMSPVL---SRPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 78 (223)
Q Consensus 6 g~~lvVDnT~~s~~~---~~pl----~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ 78 (223)
|+++|+|++++.... ..++ ..+-++++.|++|.++..+..+|. +++ ++++.+.+..... ..+.++...+
T Consensus 187 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~-~~~-~~~~~~~l~~~~~--~~~~~~~~~~ 262 (363)
T 3ffh_A 187 DVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGY-GIA-DKEIIRQLNIVRP--PFNTTSIGQK 262 (363)
T ss_dssp TSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEE-EEE-CHHHHHHHHHTCC--SCCCBHHHHH
T ss_pred CcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceee-eec-CHHHHHHHHHhCC--CCCCCHHHHH
Confidence 999999999862111 1111 223458999999999867766555 445 5566666654332 2346777677
Q ss_pred HHHhcH---HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-CHHHHHHHHh
Q 027424 79 ICLRGV---KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 154 (223)
Q Consensus 79 ll~~~l---~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~~~~~~~f~~ 154 (223)
.+...+ +.+..+.++..++...+.+.|++++.+. + +|+ .|+.+.+++. +.+...+.+.
T Consensus 263 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~----------------~~~~~~~~~~~~~~~~~~~l~ 324 (363)
T 3ffh_A 263 LAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVK-L-YPA----------------NGNFVLIDLGIEAGTIFSYLE 324 (363)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-CCC----------------CSSEEEEECSSCHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-CCC----------------CCeEEEEECCCCHHHHHHHHH
Confidence 766666 4456667888899999999999977763 3 331 3567778874 3333333222
Q ss_pred hcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHH
Q 027424 155 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-DVNDLISDLDKAL 218 (223)
Q Consensus 155 ~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE-d~~dL~~dl~~Al 218 (223)
.-++. ++-|.. .| .++.+|||+|-+ |.+.+++.|+++|
T Consensus 325 ~~gi~---v~~g~~----------------------~~-~~~~iRis~~~~~~i~~~~~~l~~~l 363 (363)
T 3ffh_A 325 KNGYI---TRSGAA----------------------LG-FPTAVRITIGKEEDNSAVIALLEKLL 363 (363)
T ss_dssp HTTEE---CEETTT----------------------TT-CTTEEEEECCCHHHHHHHHHHHHHHC
T ss_pred HCCeE---EEeCcc----------------------CC-CCCeEEEECCCHHHHHHHHHHHHHhC
Confidence 22322 222221 11 157899999943 4566666666553
No 46
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.06 E-value=3e-09 Score=93.28 Aligned_cols=175 Identities=13% Similarity=0.173 Sum_probs=106.3
Q ss_pred CccccCCEEEEecCCCCCCCc---C----cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-Hh-cCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS---R----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NA-EGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~---~----pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-~~-~g~~ 71 (223)
+|+++|+++|+|++++..... . .+..++|+++.|++|+++.. ||+++++ +++.+.+.... .. .+..
T Consensus 193 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~----GG~~~~~-~~~~~~l~~~~~~~~~~~~ 267 (384)
T 1bs0_A 193 VTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVS----GAAVLCS-STVADYLLQFARHLIYSTS 267 (384)
T ss_dssp HHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSC----CEEEEEC-HHHHHHHHHHCHHHHSSBC
T ss_pred HHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhcc----CcEEEeC-HHHHHHHHHhchhhhcCCC
Confidence 478999999999998765421 1 12246899999999999843 4877765 56666665432 12 2334
Q ss_pred CChHhHHHHHhcHHHHH-----HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 72 LAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~-----~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
.++.....+...++.+. .+.++..++...+.+.|++.+ + ++. | +.|+++.|.+.+.
T Consensus 268 ~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~-~----------------~~~~~~~~~~~~~ 328 (384)
T 1bs0_A 268 MPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-F-TLA-D----------------SCSAIQPLIVGDN 328 (384)
T ss_dssp CCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-C-EEC-S----------------CCSSBCCEEEESH
T ss_pred CCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC-C-ccc-C----------------CCCCEEEEEeCCH
Confidence 67777666666776654 455777888999999998874 3 332 2 1466777777543
Q ss_pred HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHh
Q 027424 147 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 219 (223)
Q Consensus 147 ~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~Al~ 219 (223)
....+|.+.|.--.+.+.-|.. | ..+ ..++.+|||++....++-++.+-++|+
T Consensus 329 ~~~~~l~~~l~~~gi~v~~~~~------~------~~~--------~~~~~~Ri~~~~~~~~~~i~~~~~~l~ 381 (384)
T 1bs0_A 329 SRALQLAEKLRQQGCWVTAIRP------P------TVP--------AGTARLRLTLTAAHEMQDIDRLLEVLH 381 (384)
T ss_dssp HHHHHHHHHHHHTTEECCEECT------T------SSC--------TTCEEECCBCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCcEEEeecC------C------CCC--------CCCceEEEEEcCCCCHHHHHHHHHHHH
Confidence 3444555544221222222211 1 000 124789999998744444455555554
No 47
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.06 E-value=2.2e-09 Score=95.62 Aligned_cols=106 Identities=9% Similarity=-0.014 Sum_probs=73.0
Q ss_pred CccccCCEEEEecCCCCCCC----cCcccC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|+++|+|++++.... ...+.+ +.|+++.|++|.++..+..+| +++. ++++.+.+.........+.
T Consensus 209 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G-~~~~-~~~~~~~l~~~~~~~~~~~ 286 (404)
T 2o1b_A 209 KFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVG-FAVG-NKDMIQALKKYQTHTNAGM 286 (404)
T ss_dssp HHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCE-EEEE-CHHHHHHHHHHHHHHCCCC
T ss_pred HHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheE-eEec-CHHHHHHHHHHHhhccCCC
Confidence 47899999999999865321 122333 457999999999976665555 4555 4567777766555544456
Q ss_pred ChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcC
Q 027424 73 APFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~ 108 (223)
++...+.+...|+. +..+.++..++...+.+.|+++
T Consensus 287 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 326 (404)
T 2o1b_A 287 FGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA 326 (404)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77766666666665 3344466777888899999887
No 48
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.06 E-value=1.4e-09 Score=94.95 Aligned_cols=110 Identities=15% Similarity=0.075 Sum_probs=75.3
Q ss_pred CccccCCEEEEecCCCCCCCc-----Cccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++..... .++. .+.++++.|++|.++..+..+|.++ ..++++.+.+.........+
T Consensus 178 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~-~~~~~~~~~~~~~~~~~~~~ 256 (377)
T 3fdb_A 178 LAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQII-FSNPSDAEHWQQLSPVIKDG 256 (377)
T ss_dssp HHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEE-CCSHHHHHHHHHSCHHHHCC
T ss_pred HHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEE-eCCHHHHHHHHHHHHhhcCC
Confidence 378999999999998642211 1221 2345999999999976666665444 55666766665543333345
Q ss_pred CChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhc-CCCe
Q 027424 72 LAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRV 111 (223)
Q Consensus 72 ~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~-~p~v 111 (223)
.++...+.+...++. +..+.++..++...+.+.|++ .|.+
T Consensus 257 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 301 (377)
T 3fdb_A 257 ASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGA 301 (377)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred CCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 677767666666665 455667888899999999988 6765
No 49
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.05 E-value=9.4e-10 Score=95.92 Aligned_cols=168 Identities=14% Similarity=0.183 Sum_probs=104.0
Q ss_pred ccCCEEEEecCCCCCC-------CcCccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 4 AHGALLLVDNSIMSPV-------LSRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 4 ~~g~~lvVDnT~~s~~-------~~~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
++|+++|+|++++... ...++. .+.++++.|++|.++.++..+|. +++ ++++.+.+....... ..
T Consensus 183 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-~~~-~~~~~~~~~~~~~~~--~~ 258 (365)
T 3get_A 183 NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGY-GIA-NANIISAFYKLRAPF--NV 258 (365)
T ss_dssp CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEE-EEE-CHHHHHHHHHHSCTT--CS
T ss_pred CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEE-EEc-CHHHHHHHHHhcCCC--Cc
Confidence 5699999999976211 122322 36779999999999766766655 545 556766665544333 35
Q ss_pred ChHhHHHHHhcHH---HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHH
Q 027424 73 APFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 149 (223)
Q Consensus 73 sp~da~ll~~~l~---tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~ 149 (223)
++...+.+...++ .+..+.++..++...+.+.|+++ .+ ++ +|+ .|+.+.+.+.+. ..
T Consensus 259 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~-~~~----------------~~~~~~~~~~~~-~~ 318 (365)
T 3get_A 259 SNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NI-KI-IDS----------------YTNFITYFFDEK-NS 318 (365)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TC-EE-CCC----------------SSSEEEEECSSS-CH
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CC-EE-CCC----------------CCeEEEEECCCC-CH
Confidence 6665665555554 35666788889999999999988 44 33 331 356677777421 23
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 219 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-Ed~~dL~~dl~~Al~ 219 (223)
.+|.+.|.--.+.++-|.. .| ++.+|+|++- ||.+.+++.|+++++
T Consensus 319 ~~~~~~l~~~gi~v~~g~~----------------------~~--~~~iRis~~~~~~i~~l~~~l~~~l~ 365 (365)
T 3get_A 319 TDLSEKLLKKGIIIRNLKS----------------------YG--LNAIRITIGTSYENEKFFTEFDKILR 365 (365)
T ss_dssp HHHHHHHHTTTEECEECGG----------------------GT--CSEEEEECCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCEEEEECcc----------------------CC--CCEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 3333333211122222211 12 5789999995 467888888887763
No 50
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.05 E-value=8e-10 Score=97.98 Aligned_cols=103 Identities=29% Similarity=0.378 Sum_probs=79.1
Q ss_pred CccccCCEEEEecCCCCCC----CcC-cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPV----LSR-PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~----~~~-pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|++++..+ ... ++.+|+|+++.|++|+++|. .+|+++++ +++.++++......+.+.+|.
T Consensus 167 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~---~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~ 242 (374)
T 2aeu_A 167 TAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGP---RGGLLAGK-KELVDKIYIEGTKFGLEAQPP 242 (374)
T ss_dssp HHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSC---SCEEEEEE-HHHHHHHHHHHHTTTCBCCHH
T ss_pred HHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCc---ceEEEEEC-HHHHHHHHHhhccccCCCCHH
Confidence 4789999999999986542 122 67789999999999999874 46777665 467777777666677678888
Q ss_pred hHHHHHhcHHHHHH-HHHHHHhHHHHH----HHHHhc
Q 027424 76 DCWICLRGVKTMAL-RVEKQQDNAQKI----AEFLAS 107 (223)
Q Consensus 76 da~ll~~~l~tl~~-R~~~~~~na~~l----a~~L~~ 107 (223)
.++.+..+++.+.. |++++.+|+..+ .++|++
T Consensus 243 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 279 (374)
T 2aeu_A 243 LLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNK 279 (374)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899988755 788888888777 466654
No 51
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.04 E-value=1e-09 Score=96.90 Aligned_cols=182 Identities=15% Similarity=0.057 Sum_probs=103.3
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH---------hcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN---------AEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~---------~~g~ 70 (223)
+|+++|+++++|++++.+.. ...-++|+|+++.|++|++++ . +||+++++ +++.++++.... ....
T Consensus 190 l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~-~--~G~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~ 265 (406)
T 3cai_A 190 LVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGP-P--IGAMVFRD-PSVMNSFGSVSTNPYATGPARLEIG 265 (406)
T ss_dssp HHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSC-S--CEEEEESC-HHHHHTSCCCCSCTTCCGGGGGCCS
T ss_pred HHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCC-C--cCeEEEEe-hHHHhhcCCcccCCCCCccccccCC
Confidence 47899999999999976543 232346899999999998753 3 44377665 455444332110 1122
Q ss_pred CCChHhHHHHHhcHHHH-------------------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhh
Q 027424 71 GLAPFDCWICLRGVKTM-------------------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 131 (223)
Q Consensus 71 ~~sp~da~ll~~~l~tl-------------------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~ 131 (223)
+.++.....+...++.+ ....++..+++..+.+.|++.|.+ ++..|.
T Consensus 266 t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~------------- 331 (406)
T 3cai_A 266 VHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLV-MLIGRP------------- 331 (406)
T ss_dssp CCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTE-EECCCC-------------
T ss_pred CccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCe-EEcCCc-------------
Confidence 33443332333344432 334466678888999999988876 454331
Q ss_pred hCCCCeeEEEEeC--CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC--CCeEEEEecCCCH
Q 027424 132 AKGAGSVLSFLTG--SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT--EDLVRISVGIEDV 207 (223)
Q Consensus 132 ~~g~ggl~sf~~~--~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~--~~liRlsvGlEd~ 207 (223)
...+++++|.+. +.+...+.+..-++ .++.|...+ .....|.+ .+.+|||++....
T Consensus 332 -~~~~~~~~~~~~~~~~~~~~~~L~~~gi---~v~~g~~~~----------------~~~~~g~~~~~~~iRis~~~~~t 391 (406)
T 3cai_A 332 -EAQIPVVSFAVHKVPADRVVQRLADNGI---LAIANTGSR----------------VLDVLGVNDVGGAVTVGLAHYST 391 (406)
T ss_dssp -SSBCSEEEEEETTBCHHHHHHHHHHTTE---ECEECCSCH----------------HHHHHTTTTTTCCEEEECCTTCC
T ss_pred -cccCCEEEEEECCcCHHHHHHHHHHCCc---EEecCChHH----------------HHHHcCCCCCCCeEEEEeecCCC
Confidence 123568889874 23333333333232 233332100 01123433 4789999998765
Q ss_pred HHHHHHHHHHHhc
Q 027424 208 NDLISDLDKALRT 220 (223)
Q Consensus 208 ~dL~~dl~~Al~~ 220 (223)
++-++.+.++|+.
T Consensus 392 ~e~i~~~~~~l~~ 404 (406)
T 3cai_A 392 MAEVDQLVRALAS 404 (406)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 5556666666654
No 52
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.04 E-value=1.6e-09 Score=94.60 Aligned_cols=198 Identities=14% Similarity=0.093 Sum_probs=115.0
Q ss_pred CccccCCEEEEecCCCCCCCc--CcccCCCcEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHh---------
Q 027424 1 MAHAHGALLLVDNSIMSPVLS--RPLELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~--~pl~~GADivv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--------- 67 (223)
+|+++|+++|+|++++.+... +++...+|+++.|++ |+++|++. +|+++.+++++.+++......
T Consensus 147 ~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K~l~~~g~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (374)
T 3uwc_A 147 IAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLKNLNVWSD--AGVIITHSDEYAEKLRLYRNHGLINRDVCV 224 (374)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSSSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEES
T ss_pred HHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCCcCCccce--eEEEEeCCHHHHHHHHHHHhcCccccCccc
Confidence 478999999999988654333 333334899999966 99998665 788887777776666554321
Q ss_pred ---cCCCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCC-eeEEEcCCCCCCcchHHHHhhhCCCC-eeEEEE
Q 027424 68 ---EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR-VKKVNYAGLPEHPGHELHYSQAKGAG-SVLSFL 142 (223)
Q Consensus 68 ---~g~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~-v~~V~yP~l~~~~~~~~~~~~~~g~g-gl~sf~ 142 (223)
....+++..+.+.+..++.+..+.++..+++..+.+.|++.+. +. .|..+.. .... ..+.+.
T Consensus 225 ~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~---~~~~~~~----------~~~~~~~~~~~ 291 (374)
T 3uwc_A 225 EYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFID---VPVRREG----------VYHVFHIYVLR 291 (374)
T ss_dssp SCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEE---CCCCCTT----------EECCCSSEEEE
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEE---eccCCCC----------CceeeEEEEEE
Confidence 1112466666666666666777788888999999999998875 42 2322111 0011 223344
Q ss_pred eCCHHHHHHHHhhcCcceeccccCCCCCCCCCCcccc--C--CCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHH
Q 027424 143 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS--H--ASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDL 214 (223)
Q Consensus 143 ~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~--h--~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl 214 (223)
..+.+...+.+..-++. ++.|...++-..|.... + ..++..++ +..+.+|||++. ||++.+++-|
T Consensus 292 ~~~~~~l~~~L~~~gi~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lrl~~~~~~t~edi~~~~~~l 364 (374)
T 3uwc_A 292 VKYRDQLFQYLKDNGIE---VKIHYPIAMHLQPAAKSLGYQQGDFPMAEK----HGEAVITLPAHPYLTEEEINYIIKKV 364 (374)
T ss_dssp ETTHHHHHHHHHHTTBC---CBCSCSSCGGGSGGGGGGCCCTTSCHHHHH----HHHHEEEECCCTTSCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHCCCc---cccCCCCccccChhhhhcCCccCCCccHHH----HHhCEEEccCCCCCCHHHHHHHHHHH
Confidence 44444444444443443 22232122222222110 0 01111111 123689999884 4677777777
Q ss_pred HHHHhc
Q 027424 215 DKALRT 220 (223)
Q Consensus 215 ~~Al~~ 220 (223)
+++++.
T Consensus 365 ~~~l~~ 370 (374)
T 3uwc_A 365 REFYLE 370 (374)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 777764
No 53
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.03 E-value=3.8e-10 Score=99.31 Aligned_cols=190 Identities=21% Similarity=0.129 Sum_probs=96.2
Q ss_pred CccccCCEEEEecCCCCCCCcCcc-cCCCcEEEecccccccCCcccceeEEE-ecChhHH---HHHHHH-------HHhc
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPL-ELGADIVMHSATKFIAGHSDVMAGVLA-VKGERLA---KELYFL-------QNAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl-~~GADivv~S~tK~l~G~~d~~~G~v~-~~~~~~~---~~l~~~-------~~~~ 68 (223)
+|+++|+++|+|++++.+.....+ .+ +|+++.|++|.++..+ + |+++ ++++.+. ..+... ....
T Consensus 184 la~~~~~~li~D~a~~~~~~~~~~~~~-~d~~~~s~~K~~g~~g--~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (400)
T 3vax_A 184 QLRATPTYLHVDAAQGYGKVPGDLTTP-IDMISISGHKIGAPKG--V-GALVTRRREEMDDERVPLEPIMFGGGQERKLR 259 (400)
T ss_dssp HHTTSSCEEEEECTTTTTTSGGGGGSC-CSEEEEETGGGTSCSS--C-EEEEECBCSSSTTCBCCCCCSSCSSCTGGGTS
T ss_pred HHHhcCCEEEEEhhhhcCCCCcChhhc-CcEEEEeHHHhCCCCc--e-EEEEEecchhccccccccCceecCCCceeeee
Confidence 478999999999999765432222 23 8999999999654332 3 4455 5552111 011100 0112
Q ss_pred CCCCChHhHHHHHhcHHHHH----HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 69 GSGLAPFDCWICLRGVKTMA----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~tl~----~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
..+.++...+.+..+++.+. ...++..+++..+.+.|+ .|.+ ++..|. ....++++.|.+.
T Consensus 260 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~-~~~~~~-------------~~~~~~~~~~~~~ 324 (400)
T 3vax_A 260 PGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSF-QVNGDQ-------------DHVVPHILNLSFE 324 (400)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTC-EECSCT-------------TSBCTTEEEEECT
T ss_pred cCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCE-EEeCCc-------------ccCCCCEEEEEeC
Confidence 22445555555556666543 344666677777777887 6665 333221 1124678888874
Q ss_pred CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC----CCeEEEEe-c----CCCHHHHHHHHH
Q 027424 145 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISV-G----IEDVNDLISDLD 215 (223)
Q Consensus 145 ~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~----~~liRlsv-G----lEd~~dL~~dl~ 215 (223)
+. ..++|.+.|. ..+.++.|...+.... .+.......|++ ++.||||+ | -|+.+.+++.|+
T Consensus 325 ~~-~~~~l~~~L~-~gi~v~~g~~~~~~~~--------~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~ 394 (400)
T 3vax_A 325 DV-DAEAFLVTLK-DLVAVATGSASTSASF--------TPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVA 394 (400)
T ss_dssp TC-CHHHHHHHHH-HHHHHTTTTEEEEEEE--------CCHHHHHTTTCCHHHHTSEEEEEEEEC---------------
T ss_pred CC-CHHHHHHHHh-cCcEEEecccccCCCC--------CccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHH
Confidence 31 2345555665 5555666643221100 011223345555 48999999 8 455666666666
Q ss_pred HHHh
Q 027424 216 KALR 219 (223)
Q Consensus 216 ~Al~ 219 (223)
++++
T Consensus 395 ~~~~ 398 (400)
T 3vax_A 395 KLKP 398 (400)
T ss_dssp ----
T ss_pred HHhc
Confidence 6654
No 54
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.02 E-value=1.9e-10 Score=99.55 Aligned_cols=171 Identities=17% Similarity=0.200 Sum_probs=104.7
Q ss_pred CccccCCEEEEecCCC------CCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC--
Q 027424 1 MAHAHGALLLVDNSIM------SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL-- 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~------s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~-- 72 (223)
+|+++|+++++|++.. .+....++..++|.++.|+||++++. +||+++ .++++.+++...+...|..+
T Consensus 161 ~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~---~G~~~~-~~~~~~~~~~~~~~~~~~~~~~ 236 (347)
T 1jg8_A 161 IAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAP---VGSVVV-GDRDFIERARKARKMLGGGMRQ 236 (347)
T ss_dssp HHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCS---SCEEEE-ECHHHHHHHHHHHHHHTCCCSS
T ss_pred HHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCC---ceEEEE-cCHHHHHHHHHHHHHcCCchhH
Confidence 3788999999999741 12222334457999999999999864 566554 45666666665555555433
Q ss_pred ChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC-HHHHHH
Q 027424 73 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKH 151 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~-~~~~~~ 151 (223)
++..++....+++....++++..+++..+.+.|++. .+. +.++ ...|+++.|.+.. .....+
T Consensus 237 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~ 299 (347)
T 1jg8_A 237 AGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEI-GYS-VNPE---------------DVKTNMVILRTDNLKVNAHG 299 (347)
T ss_dssp THHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHH-TCB-CCGG---------------GCCSSEEEEECTTSSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cce-eccC---------------CCcceEEEEEcccccCCHHH
Confidence 445566666777776566777778889999999886 432 3221 1146678888742 112334
Q ss_pred HHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 027424 152 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 219 (223)
Q Consensus 152 f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~ 219 (223)
|.+.|.--.+.++ |. .++.+|||++. |+.+.+++-|+++++
T Consensus 300 ~~~~l~~~gi~v~----------~~-----------------~~~~iRl~~~~~~~~e~i~~~~~~l~~~l~ 344 (347)
T 1jg8_A 300 FIEALRNSGVLAN----------AV-----------------SDTEIRLVTHKDVSRNDIEEALNIFEKLFR 344 (347)
T ss_dssp HHHHHHHHTEECE----------EE-----------------ETTEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEe----------cC-----------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 5444421111111 10 13569999974 456666677766664
No 55
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.02 E-value=2.2e-09 Score=93.72 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=74.3
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-cC-----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-EL-----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-~~-----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
+|+++|+++|+|++++.... ..++ .+ +.++++.|++|.++..+..+| +++.+++++.+.+.......+.
T Consensus 184 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~~~~~~~~~~~~~~~~~~ 262 (383)
T 3kax_A 184 LCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQAS-IIIIPNEKLRQAFTSIQYRQGF 262 (383)
T ss_dssp HHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCE-EEECCCHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhhe-EEEeCCHHHHHHHHHHHhhccc
Confidence 37899999999999864221 1122 22 345999999999975665554 4555566777777665554443
Q ss_pred -CCChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhc-CCCe
Q 027424 71 -GLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRV 111 (223)
Q Consensus 71 -~~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~-~p~v 111 (223)
+.++...+.+...++. +..+.++..++...+.+.|++ .|.+
T Consensus 263 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 309 (383)
T 3kax_A 263 HGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTL 309 (383)
T ss_dssp CCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 5666666655555543 455667788889999999988 5765
No 56
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.01 E-value=9e-09 Score=95.32 Aligned_cols=177 Identities=16% Similarity=0.174 Sum_probs=106.8
Q ss_pred CccccCCEEEEecCCCC-----CCCcCcccCCCcEEEecccccccCCcccceeEEEecCh--------------hHHHHH
Q 027424 1 MAHAHGALLLVDNSIMS-----PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------RLAKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-----~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~--------------~~~~~l 61 (223)
+|+++|++|+||++++. +....|++ ++|+++.|+||+++|+ .||+++++++ ++.+++
T Consensus 226 ia~~~g~~livD~Ah~~glv~~g~~~~~~~-~aDiv~~S~hK~l~Gp---~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i 301 (490)
T 2a7v_A 226 VCDEVKAHLLADMAHISGLVAAKVIPSPFK-HADIVTTTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRI 301 (490)
T ss_dssp HHHHTTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESSGGGCSC---SCEEEEEECSEEEEETTTEEEEECCCHHHH
T ss_pred HHHHcCCEEEEccccccccccCCcCCCCCC-CCCEEEECCcccCccc---cchheeeccchhcccccccchhhHHHHHHH
Confidence 58999999999999643 34457776 8999999999999987 4788888764 344555
Q ss_pred HHHHH-hcCCCCChHhHHHHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCC
Q 027424 62 YFLQN-AEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 135 (223)
Q Consensus 62 ~~~~~-~~g~~~sp~da~ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ 135 (223)
+.... .......+....-+..+++ .+..+.++..+|+..+++.|++.. + +|..++- .
T Consensus 302 ~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G-~-~v~~~~t---------------~ 364 (490)
T 2a7v_A 302 NFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERG-Y-SLVSGGT---------------D 364 (490)
T ss_dssp HHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-C-EEGGGSC---------------S
T ss_pred HHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcC-c-EEecCCC---------------C
Confidence 44321 1111223321111222332 345677899999999999999863 3 3432211 1
Q ss_pred CeeEEEEeC----CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEe--------c
Q 027424 136 GSVLSFLTG----SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--------G 203 (223)
Q Consensus 136 ggl~sf~~~----~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsv--------G 203 (223)
..++.+.+. +...+.++++..++.-...++.+.. .| ..++-|||++ +
T Consensus 365 t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~----~p-----------------~~~~~iRig~~a~t~~g~~ 423 (490)
T 2a7v_A 365 NHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDR----SA-----------------ITPGGLRLGAPALTSRQFR 423 (490)
T ss_dssp SSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCC----CS-----------------SSCSEEEEESHHHHHTTCC
T ss_pred CeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCC----CC-----------------CCCCceEecccccccCCCC
Confidence 245556652 2345666666655542211111111 11 1345699965 3
Q ss_pred CCCHHHHHHHHHHHHh
Q 027424 204 IEDVNDLISDLDKALR 219 (223)
Q Consensus 204 lEd~~dL~~dl~~Al~ 219 (223)
-||.+.+++-|.++|.
T Consensus 424 ~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 424 EDDFRRVVDFIDEGVN 439 (490)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4778888888888875
No 57
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.01 E-value=7.6e-10 Score=96.50 Aligned_cols=170 Identities=15% Similarity=0.108 Sum_probs=96.9
Q ss_pred CccccCCEEEEecCCCCCC---Cc---------CcccC--CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPV---LS---------RPLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~---~~---------~pl~~--GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~ 66 (223)
+|+++|+++++|++++... .. .++.. ++|+++.|++|+++++. .+| +++++++.+.+.+.....
T Consensus 196 l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~-~~g-~~~~~~~~~~~~~~~~~~ 273 (397)
T 3f9t_A 196 IAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPI-PSG-GILFKDIGYKRYLDVDAP 273 (397)
T ss_dssp HHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCS-SCE-EEEESSGGGGGGTCEECT
T ss_pred HHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCC-Cce-EEEEeCHHHHHhhccCCc
Confidence 4789999999999986421 11 13333 89999999999996543 344 455666655433211111
Q ss_pred hc---------CCCC--ChHhHHHHHhcH--HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 67 AE---------GSGL--APFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 67 ~~---------g~~~--sp~da~ll~~~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
.. |... ++...+..++.+ +.+..+.++..+++..+.+.|+++ .+. +.+|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~---------------- 335 (397)
T 3f9t_A 274 YLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFK-PVIE---------------- 335 (397)
T ss_dssp TSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSC----------------
T ss_pred cccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-EEcC----------------
Confidence 11 1111 222333333322 334667788889999999999988 442 2222
Q ss_pred CCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHH
Q 027424 134 GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVND 209 (223)
Q Consensus 134 g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~d 209 (223)
..++++.|.+.+.+...+.+..-++. ++-|. .++.+|||++. |+.+.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~~gi~---v~~~~--------------------------~~~~~Ri~~~~~~~~e~i~~ 386 (397)
T 3f9t_A 336 PILNIVAIEDEDYKEVCKKLRDRGIY---VSVCN--------------------------CVKALRIVVMPHIKREHIDN 386 (397)
T ss_dssp CSSSEEEEECTTHHHHHHHHHHTTCB---CEECS--------------------------SSSEEEEECCTTCCHHHHHH
T ss_pred CCccEEEEEeCCHHHHHHHHHhCCeE---EeccC--------------------------CCCEEEEEEcCCCCHHHHHH
Confidence 14678888875433333333222433 11111 14789999996 44566
Q ss_pred HHHHHHHHHh
Q 027424 210 LISDLDKALR 219 (223)
Q Consensus 210 L~~dl~~Al~ 219 (223)
+++.|+++++
T Consensus 387 ~~~~l~~~l~ 396 (397)
T 3f9t_A 387 FIEILNSIKR 396 (397)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhhC
Confidence 6666666653
No 58
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.01 E-value=2.1e-08 Score=89.97 Aligned_cols=115 Identities=14% Similarity=-0.014 Sum_probs=76.5
Q ss_pred CccccCCEEEEecCCCCCC-----CcCcccCCCc---EEEecccccccCCcccceeEEEecC-----hhHHHHHHHHHHh
Q 027424 1 MAHAHGALLLVDNSIMSPV-----LSRPLELGAD---IVMHSATKFIAGHSDVMAGVLAVKG-----ERLAKELYFLQNA 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-----~~~pl~~GAD---ivv~S~tK~l~G~~d~~~G~v~~~~-----~~~~~~l~~~~~~ 67 (223)
+|+++|+++|+|++++... ......++.| |++.|++|.++..+..+|++++.++ +++.+.+......
T Consensus 219 ~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~ 298 (427)
T 3dyd_A 219 VAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR 298 (427)
T ss_dssp HHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc
Confidence 4789999999999986421 1122233444 7889999998888888776554332 3455555444322
Q ss_pred cCCCCChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 68 EGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 68 ~g~~~sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
. .+.++.....+...|+. +..+.++..++...+.+.|++.|.+ ++..|
T Consensus 299 ~-~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~p 351 (427)
T 3dyd_A 299 I-LGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGL-RPVRP 351 (427)
T ss_dssp H-CCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTE-EEECC
T ss_pred c-CCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCc-eecCC
Confidence 2 23566666666666653 4566788888999999999998887 45555
No 59
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.01 E-value=1.4e-09 Score=96.65 Aligned_cols=110 Identities=14% Similarity=0.076 Sum_probs=72.7
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc--CCC-cEEEecccccccCCcccceeEEEecCh----hHHHHHHHHHHhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE--LGA-DIVMHSATKFIAGHSDVMAGVLAVKGE----RLAKELYFLQNAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~--~GA-Divv~S~tK~l~G~~d~~~G~v~~~~~----~~~~~l~~~~~~~g 69 (223)
+|+++|+++|+|++++.... ..... .+. |+++.|++|+++..+..+|++++..++ ++.+.+.......
T Consensus 202 ~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~- 280 (406)
T 1xi9_A 202 IAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIR- 280 (406)
T ss_dssp HHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHT-
T ss_pred HHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhh-
Confidence 47899999999999865322 11112 356 899999999998667666554432345 6777766555443
Q ss_pred CCCChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 70 SGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.+.++...+.+...|+. +....++..++...+.+.|++.|.+
T Consensus 281 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 326 (406)
T 1xi9_A 281 LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGI 326 (406)
T ss_dssp CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34566666666666642 3334466677788888899888765
No 60
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.01 E-value=2.8e-09 Score=92.81 Aligned_cols=108 Identities=16% Similarity=0.168 Sum_probs=75.7
Q ss_pred CccccCCEEEEecCCCCCCCcCc--ccCCCcEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHh---------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP--LELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p--l~~GADivv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--------- 67 (223)
+|+++|+++|+|++++.+..... +..-.|+++.|++ |++++ + +||+++.+++++.+++......
T Consensus 143 l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (375)
T 2fnu_A 143 LCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFE 219 (375)
T ss_dssp HHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSC
T ss_pred HHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccc
Confidence 47899999999999865432221 2211389999988 99975 4 6776655556676666544321
Q ss_pred -----cC--CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 68 -----EG--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 68 -----~g--~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.+ ..+++..+.+.+..++.+..+.++..+++..+.+.|++.|.+
T Consensus 220 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 270 (375)
T 2fnu_A 220 GEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYF 270 (375)
T ss_dssp EEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 11 145676666666667777888899999999999999998865
No 61
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.00 E-value=1.3e-08 Score=93.48 Aligned_cols=179 Identities=16% Similarity=0.179 Sum_probs=105.5
Q ss_pred CccccCCEEEEecCCCC-----CCCcCcccCCCcEEEecccccccCCcccceeEEEecCh--------------hHHHHH
Q 027424 1 MAHAHGALLLVDNSIMS-----PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------RLAKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-----~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~--------------~~~~~l 61 (223)
+|+++|++|++|++++. +....|+. ++|+++.|+||++.|+. +|+++++++ ++.+.+
T Consensus 216 ia~~~g~~livD~ah~~g~~~~~~~~~p~~-~~div~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~g~~~~y~~~~~~ 291 (483)
T 1rv3_A 216 IADENGAYLMADMAHISGLVVAGVVPSPFE-HCHVVTTTTHKTLRGCR---AGMIFYRRGVRSVDPKTGKEILYNLESLI 291 (483)
T ss_dssp HHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TCSEEEEESSGGGCCCS---CEEEEEECSBCC-------CCBCCHHHHH
T ss_pred HHHHcCCEEEEEccchhcccccCCCCCCCC-CCcEEEecCcccCCCCC---ceEEEEcchhhhhccccCcchhhHHHHHh
Confidence 58999999999999763 23345665 89999999999998873 588887764 233333
Q ss_pred HHHHHhcC--CCCChHhHHHHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCC
Q 027424 62 YFLQNAEG--SGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 134 (223)
Q Consensus 62 ~~~~~~~g--~~~sp~da~ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g 134 (223)
.... ..+ .+.......-+..+++ .+..+.++..+|+..+++.|++. ++ ++..|+-. .
T Consensus 292 ~~~~-~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~-------------~ 355 (483)
T 1rv3_A 292 NSAV-FPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GY-KIVTGGSD-------------N 355 (483)
T ss_dssp HHHH-TTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TC-EEGGGSCS-------------S
T ss_pred hhhc-CCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CC-EeccCCCC-------------C
Confidence 3211 111 1222211112222333 34566788899999999999987 44 45444210 0
Q ss_pred CCeeEEEEe-C-CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec--------C
Q 027424 135 AGSVLSFLT-G-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------I 204 (223)
Q Consensus 135 ~ggl~sf~~-~-~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--------l 204 (223)
+-.++.|.. + +.+.+.++++..++.-......|.. .+ ..++.||||++ .
T Consensus 356 ~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~----~~-----------------~~~~~iRis~~~~~t~g~~~ 414 (483)
T 1rv3_A 356 HLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDK----SA-----------------LRPSGLRLGTPALTSRGLLE 414 (483)
T ss_dssp SEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCS----CT-----------------TSCCEEEEECHHHHHTTCCH
T ss_pred ceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCC----cC-----------------CCCceEEeecCCcccCCCCH
Confidence 122333322 2 3455666676655542211111110 01 12478999999 4
Q ss_pred CCHHHHHHHHHHHHhc
Q 027424 205 EDVNDLISDLDKALRT 220 (223)
Q Consensus 205 Ed~~dL~~dl~~Al~~ 220 (223)
||.+.+++-|.++++.
T Consensus 415 edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 415 KDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6788888888887764
No 62
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.00 E-value=1.6e-08 Score=88.56 Aligned_cols=182 Identities=21% Similarity=0.209 Sum_probs=104.9
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-------------
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN------------- 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~------------- 66 (223)
+|+++|+++|+|++++.+.. .+.-+.++|+++.|++|.+++.+ .|+++++ +++.+++.....
T Consensus 189 l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (406)
T 1kmj_A 189 LAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTG---IGILYVK-EALLQEMPPWEGGGSMIATVSLSEG 264 (406)
T ss_dssp HHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTT---CEEEEEC-HHHHHHCCCSSCSTTSEEEEETTTE
T ss_pred HHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhccCCCC---cEEEEEe-HHHHhhcCCcccCCCceeecccccc
Confidence 47899999999999875432 12223589999999999997655 4777665 555554432110
Q ss_pred --------hcCCCCChHhHHHHH-hcHHHHH-----HHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh
Q 027424 67 --------AEGSGLAPFDCWICL-RGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 67 --------~~g~~~sp~da~ll~-~~l~tl~-----~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~ 132 (223)
.+....++..+...+ ..++.+. ...++..+++..+.+.|++.|.+ ++.-|.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~-------------- 329 (406)
T 1kmj_A 265 TTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDL-TLYGPQ-------------- 329 (406)
T ss_dssp EEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTE-EEESCT--------------
T ss_pred cccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCe-EEecCC--------------
Confidence 011112333333222 4455442 33466678888999999988876 344331
Q ss_pred CCCCeeEEEEeC--CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC----C
Q 027424 133 KGAGSVLSFLTG--SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE----D 206 (223)
Q Consensus 133 ~g~ggl~sf~~~--~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE----d 206 (223)
+.|+++.|.+. +.+...+.+..-++. +.-|... ........|. ++.+|||++.. |
T Consensus 330 -~~~~~~~~~~~~~~~~~~~~~l~~~gi~---v~~g~~~--------------~~~~~~~~g~-~~~iRis~~~~~t~~~ 390 (406)
T 1kmj_A 330 -NRLGVIAFNLGKHHAYDVGSFLDNYGIA---VRTGHHC--------------AMPLMAYYNV-PAMCRASLAMYNTHEE 390 (406)
T ss_dssp -TCCSEEEEEETTCCHHHHHHHHHHTTEE---CEEECTT--------------CHHHHHHTTC-SCEEEEECCTTCCHHH
T ss_pred -CcCCEEEEEECCCCHHHHHHHHhhCCcE---EEecccc--------------chHHHHhcCC-CCeEEEEeecCCCHHH
Confidence 14788889884 333333334333433 1112110 0111122342 57899999975 6
Q ss_pred HHHHHHHHHHHHhc
Q 027424 207 VNDLISDLDKALRT 220 (223)
Q Consensus 207 ~~dL~~dl~~Al~~ 220 (223)
.+.+++.|+++++.
T Consensus 391 i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 391 VDRLVTGLQRIHRL 404 (406)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 67777777777653
No 63
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.98 E-value=1.6e-08 Score=88.11 Aligned_cols=180 Identities=13% Similarity=0.127 Sum_probs=104.2
Q ss_pred Ccccc--CCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHH-HHH--------------
Q 027424 1 MAHAH--GALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-ELY-------------- 62 (223)
Q Consensus 1 ia~~~--g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~-~l~-------------- 62 (223)
+|+++ |+++++|++++.+.. ...-++|+|+++.|++|+++|.... |+++++++ +.+ +++
T Consensus 162 ~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~--G~~~~~~~-~~~~~l~~~~~~~~~~~~~~~ 238 (385)
T 2bkw_A 162 AIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGL--SISLCSSR-FMDYALNDSKNGHVHGYFSSL 238 (385)
T ss_dssp HHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCE--EEEEECHH-HHHHHTCHHHHCCCSCSTTCH
T ss_pred HHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcc--eEEEEcHH-HHHHHHhhccCCCCCceeecH
Confidence 47888 999999999864322 2223458999999999988764322 66766654 333 321
Q ss_pred ----HH-HHh-cC-----CCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHH-hcCCCeeEEEcCCCCCCcch
Q 027424 63 ----FL-QNA-EG-----SGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFL-ASHPRVKKVNYAGLPEHPGH 125 (223)
Q Consensus 63 ----~~-~~~-~g-----~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L-~~~p~v~~V~yP~l~~~~~~ 125 (223)
.. ... .| .+.++...+.+..+++.+ ..+.++..+++..+.+.| ++. .+ ++..|. +..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~-~~~~~~----~~~ 312 (385)
T 2bkw_A 239 RRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QL-TSVSRY----PSN 312 (385)
T ss_dssp HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CC-EESSCS----SST
T ss_pred HHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-Cc-eecccC----ccc
Confidence 11 111 11 234554444455555543 344577788889999999 776 44 333221 100
Q ss_pred HHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE-ec-
Q 027424 126 ELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS-VG- 203 (223)
Q Consensus 126 ~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls-vG- 203 (223)
...+.++.|.+.+ ..+|.+.|.--.+.++-|.. . ...++.+||| +|
T Consensus 313 -------~~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~g~~------------~----------~~~~~~iRis~~~~ 360 (385)
T 2bkw_A 313 -------MSAHGLTAVYVAD---PPDVIAFLKSHGVVIAGGIH------------K----------DIGPKYIRIGHMGV 360 (385)
T ss_dssp -------TBCSSCEEEECSC---HHHHHHHHHHTTEECBCCCC------------T----------TTGGGEEEECCCGG
T ss_pred -------ccCCceEEEecCC---HHHHHHHHHHCCeEEeCCCC------------c----------ccCCCEEEEEcccc
Confidence 0257788898854 33444444211222222211 0 0135689999 87
Q ss_pred ------CCCHHHHHHHHHHHHhcC
Q 027424 204 ------IEDVNDLISDLDKALRTG 221 (223)
Q Consensus 204 ------lEd~~dL~~dl~~Al~~~ 221 (223)
.||.+.+++.|+++++..
T Consensus 361 ~~~~~~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 361 TACNKNLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp GTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred ccccCCHHHHHHHHHHHHHHHHhc
Confidence 367899999999888653
No 64
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=98.98 E-value=6.1e-10 Score=96.87 Aligned_cols=177 Identities=16% Similarity=0.171 Sum_probs=108.3
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHH-HHHHHH--hc-----CCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE-LYFLQN--AE-----GSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~-l~~~~~--~~-----g~~ 71 (223)
+|+++|+++|+|++++.+.. .+..++++|+++.|++|+++|.. -.|+++++++ +.++ +..... .. ..+
T Consensus 172 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~--~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (371)
T 2e7j_A 172 VCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASG--PIGVMGMKEE-WAEIVLRRSEKYKNKEVELLGCT 248 (371)
T ss_dssp HHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCS--SCEEEEECTT-TTTTTTCBCSSCTTSBGGGTTCC
T ss_pred HHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCC--CcEEEEEech-hhhhhccccccCcccccccccCC
Confidence 47899999999999876543 34445689999999999998764 3466767654 4343 332211 11 224
Q ss_pred CChHhHHHHHhcHHHHHHH-HHHH--HhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHH
Q 027424 72 LAPFDCWICLRGVKTMALR-VEKQ--QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL 148 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~R-~~~~--~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~ 148 (223)
.++...+.+..+++.+..+ .++. .+++..+.+.|++. .+ ++..|. .+.|+++.|.+. .
T Consensus 249 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~-~~~~~~--------------~~~~~~~~~~~~---~ 309 (371)
T 2e7j_A 249 ARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKL-GI-KQLGDN--------------PHNHDLMFFHAE---V 309 (371)
T ss_dssp CCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHT-TC-EEESSS--------------SCCSSEEEEECH---H
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-Cc-EEecCC--------------CccCceEEEECC---C
Confidence 4555555566677766533 3555 68889999999887 54 343331 013678888875 4
Q ss_pred HHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhc---CCCCCeEE-EEecCC-----CHHHHHHHHHHHHh
Q 027424 149 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR---GLTEDLVR-ISVGIE-----DVNDLISDLDKALR 219 (223)
Q Consensus 149 ~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~---gi~~~liR-lsvGlE-----d~~dL~~dl~~Al~ 219 (223)
..+|.+.+.- .+..+ .| . .... |..++.+| +|++.. +.+.+++.|+++++
T Consensus 310 ~~~~~~~l~~--~gi~~--------~~-~----------~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~ 368 (371)
T 2e7j_A 310 LYEISKKAKG--GRFFL--------YR-E----------LKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIE 368 (371)
T ss_dssp HHHHHHHSSS--GGGHH--------HH-H----------HHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--CCEEE--------Ee-c----------cccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHH
Confidence 5566666642 22211 11 0 0111 44578899 999964 45555666666655
Q ss_pred c
Q 027424 220 T 220 (223)
Q Consensus 220 ~ 220 (223)
.
T Consensus 369 ~ 369 (371)
T 2e7j_A 369 K 369 (371)
T ss_dssp H
T ss_pred h
Confidence 4
No 65
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=98.98 E-value=6.3e-09 Score=91.73 Aligned_cols=198 Identities=13% Similarity=0.076 Sum_probs=112.3
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCC--CcEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHhcC-------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG------- 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~G--ADivv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g------- 69 (223)
+|+++|+++|+|++++.+....+...+ +|+++.|++ |.++| + .+|+++.+++.+.+.+......-.
T Consensus 166 l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~-g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 242 (391)
T 3dr4_A 166 VARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITT-G--EGGMITTNDDDLAAKMRLLRGQGMDPNRRYW 242 (391)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCC-B--SCEEEEESCHHHHHHHHHHHBTTCCTTSTTC
T ss_pred HHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCc-C--CeEEEEECCHHHHHHHHHHHhcCCCCCCccc
Confidence 478999999999998765433332222 599999955 99986 3 378887887777766655432110
Q ss_pred -------CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 70 -------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 70 -------~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
..+++..+.+.+..++.+....++..+++..+.+.|++. .+. +..+..+.. ....+.++.+.
T Consensus 243 ~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~---------~~~~~~~~~i~ 311 (391)
T 3dr4_A 243 FPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNR-VTKPHVALT---------GRHVFWMYTVR 311 (391)
T ss_dssp CSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTS-EECCCCCTT---------SCCCCSSEEEE
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-Ccc-ccCcCCCCC---------CcceeEEEEEE
Confidence 235666666666667777777888888999999999887 443 222200000 01234466777
Q ss_pred eCC-----HHHHHHHHhhcCcceeccccCCCCCCCCCCcccc--CCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Q 027424 143 TGS-----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMS--HASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 215 (223)
Q Consensus 143 ~~~-----~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~--h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~ 215 (223)
+.. .+...+.+..-++. ++.|. ..+-+.|.... ...++...+. ....|||+++..-.++=++.+.
T Consensus 312 ~~~~~~~~~~~l~~~L~~~GI~---v~~~~-~p~~~~~~~~~~~~~~~~~~~~~----~~~~lrl~~~~~~t~edi~~~~ 383 (391)
T 3dr4_A 312 LGEGLSTTRDQVIKDLDALGIE---SRPVF-HPMHIMPPYAHLATDDLKIAEAC----GVDGLNLPTHAGLTEADIDRVI 383 (391)
T ss_dssp ECSSCSSCHHHHHHHHHHTTCC---CEECC-CCGGGSGGGGGGCCTTCHHHHHH----HHHEEEECCCTTCCHHHHHHHH
T ss_pred ECCccchhHHHHHHHHHHCCCc---eeecC-CccccChhhhhcCcCCChHHHHH----HhCeEEccCCCCCCHHHHHHHH
Confidence 643 33333333333443 22221 12222232211 1222222222 2467999999765544455555
Q ss_pred HHHhc
Q 027424 216 KALRT 220 (223)
Q Consensus 216 ~Al~~ 220 (223)
++|++
T Consensus 384 ~~l~~ 388 (391)
T 3dr4_A 384 AALDQ 388 (391)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 55543
No 66
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.98 E-value=1.8e-09 Score=98.98 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=116.4
Q ss_pred CccccCCEEEEecCC-----CCCCCcCcccCCCcEEEecccccccCCcccceeEEEecCh--------------hHHHHH
Q 027424 1 MAHAHGALLLVDNSI-----MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------RLAKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~-----~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~--------------~~~~~l 61 (223)
||++.|++|++|-++ ++...++|+++ ||||..|+||+|.|+ .||+|.++++ ++.+++
T Consensus 226 IAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-ADvVTtTTHKTLrGP---rGG~Il~~~~~~~~~~k~~~~~~~~~~kki 301 (490)
T 3ou5_A 226 VCDEVKAHLLADMAHISGLVAAKVIPSPFKH-ADIVTTTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRI 301 (490)
T ss_dssp HHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEESSSTTCSC---SCEEEEEECSEEEECC--CCEEECCCHHHH
T ss_pred HHhhcccEEEechhhhhhhhcccccCCcccc-ceEEeccccccccCC---CceEEEeccccccccccccchhHHHHHHHH
Confidence 578999999999996 45678999996 999999999999999 5999988763 455565
Q ss_pred HHHHHhcCCCCChHhHHHHHh--cH-----HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCC
Q 027424 62 YFLQNAEGSGLAPFDCWICLR--GV-----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 134 (223)
Q Consensus 62 ~~~~~~~g~~~sp~da~ll~~--~l-----~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g 134 (223)
...- ..|..-+|...-.... ++ ..+....++..+||+.||+.|.+... +|..-| +..|
T Consensus 302 n~aV-FPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~--~vvsGg---TdnH--------- 366 (490)
T 3ou5_A 302 NFAV-FPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGY--SLVSGG---TDNH--------- 366 (490)
T ss_dssp HHHH-TTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC--EEGGGS---CSSS---------
T ss_pred Hhhc-CccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCC--eeecCC---CCce---------
Confidence 5431 2232234432222111 11 13567789999999999999998864 444322 1222
Q ss_pred CCeeEEEEe---C-CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHH
Q 027424 135 AGSVLSFLT---G-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDL 210 (223)
Q Consensus 135 ~ggl~sf~~---~-~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL 210 (223)
++-+++ + +-..+++.++..++......+.+.++ |..++- .+.| ++.+.|...+-+|.+++
T Consensus 367 ---lvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~s----p~~~SG--------iRiG-Tpa~TtRG~~e~dm~~I 430 (490)
T 3ou5_A 367 ---LVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRS----AITPGG--------LRLG-APALTSRQFREDDFRRV 430 (490)
T ss_dssp ---EEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCC----SSSCSE--------EEEE-SHHHHHTTCCHHHHHHH
T ss_pred ---EEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCC----CCCCCe--------eEEC-CHHHHhCCCCHHHHHHH
Confidence 444554 1 34567788999988766655554332 211100 0111 22222223556778888
Q ss_pred HHHHHHHHh
Q 027424 211 ISDLDKALR 219 (223)
Q Consensus 211 ~~dl~~Al~ 219 (223)
.+-+.+||.
T Consensus 431 A~~I~~~l~ 439 (490)
T 3ou5_A 431 VDFIDEGVN 439 (490)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887774
No 67
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=98.97 E-value=4.4e-09 Score=91.87 Aligned_cols=169 Identities=18% Similarity=0.133 Sum_probs=99.6
Q ss_pred ccCCEEEEecCCCCCCCcCcc---cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH----------------
Q 027424 4 AHGALLLVDNSIMSPVLSRPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---------------- 64 (223)
Q Consensus 4 ~~g~~lvVDnT~~s~~~~~pl---~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~---------------- 64 (223)
++|+++|+|++++-+ ..|+ +.++|+++.|++|++.|... .|++++++ ++.+++...
T Consensus 186 ~~~~~li~Dea~~~g--~~~~~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~ 260 (390)
T 1elu_A 186 NYPVRVLVDGAQSAG--SLPLDFSRLEVDYYAFTGHKWFAGPAG--VGGLYIHG-DCLGEINPTYVGWRSITYGAKGEPT 260 (390)
T ss_dssp SSCCEEEEECTTTBT--TBCCCTTTSCCSEEEEESSSTTCCCTT--CEEEEECT-TTGGGCCCCSCCTTTEEECTTSCEE
T ss_pred hcCcEEEEEcccccC--CcCCChhhcCCCEEEccccccccCCCc--eEEEEECH-HhHhhcCCccccCCcccccccCccc
Confidence 899999999998643 2233 35799999999996554421 36676665 443433211
Q ss_pred ------HHhcCCCCChHhHHHHHhcHHH------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh
Q 027424 65 ------QNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 65 ------~~~~g~~~sp~da~ll~~~l~t------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~ 132 (223)
......+.++.....+..+++. +..+.++..+++..+.+.|++.|++ ++..|.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~-------------- 325 (390)
T 1elu_A 261 GWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHV-HCLATS-------------- 325 (390)
T ss_dssp EECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTE-EESCSS--------------
T ss_pred ccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCc-EEecCc--------------
Confidence 1111123444433334344443 4446688888999999999998776 444331
Q ss_pred CCCCeeEEEEeCCHHHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHH
Q 027424 133 KGAGSVLSFLTGSLALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 209 (223)
Q Consensus 133 ~g~ggl~sf~~~~~~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~d 209 (223)
.+.|+++.|++.......+|.+.| ++. +.-|. .++.+|||++....++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~---v~~~~--------------------------~~~~iRis~~~~~~~~ 376 (390)
T 1elu_A 326 APQAGLVSFTVDSPLGHRAIVQKLEEQRIY---LRTIA--------------------------DPDCIRACCHYITDEE 376 (390)
T ss_dssp CCSSSEEEEEECSSSCHHHHHHHHHHTTEE---CEEET--------------------------TTTEEEEECCTTCCHH
T ss_pred cccccEEEEEcCCCCCHHHHHHHHHHCCEE---EEecC--------------------------CCCeEEEecccCCCHH
Confidence 235789999883111122333333 222 11110 2467999998766666
Q ss_pred HHHHHHHHHhcC
Q 027424 210 LISDLDKALRTG 221 (223)
Q Consensus 210 L~~dl~~Al~~~ 221 (223)
-++.+-++|+..
T Consensus 377 ~i~~~~~~l~~~ 388 (390)
T 1elu_A 377 EINHLLARLADF 388 (390)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHhh
Confidence 666777777643
No 68
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=98.97 E-value=4.5e-09 Score=92.66 Aligned_cols=110 Identities=12% Similarity=0.190 Sum_probs=74.0
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc------CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~------~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
+|+++|+++|+|++++.... ..++. .+.++++.|++|.++..+..+ |+++++++++.+.+.......+.
T Consensus 192 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~l~~~~~~~~~ 270 (399)
T 1c7n_A 192 IVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGM-SNIIIKNPDIRERFTKSRDATSG 270 (399)
T ss_dssp HHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCC-EEEECCCHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchhe-EEEEECCHHHHHHHHHHHhhccc
Confidence 47899999999999864321 11221 245699999999997556555 55666656677777665554432
Q ss_pred -CCChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhc-CCCe
Q 027424 71 -GLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRV 111 (223)
Q Consensus 71 -~~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~-~p~v 111 (223)
+.++...+.+...++. +..+.++..++...+.+.|++ .|.+
T Consensus 271 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 317 (399)
T 1c7n_A 271 MPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEI 317 (399)
T ss_dssp CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred CCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 4577666666566543 344456777888899999988 6765
No 69
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=98.96 E-value=1.5e-09 Score=95.50 Aligned_cols=106 Identities=16% Similarity=0.212 Sum_probs=76.0
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCC-CcEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHh----------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELG-ADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA---------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~G-ADivv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~---------- 67 (223)
+|+++|+++|+|++++.+.....-.+| .|+++.|++ |+++|. .+|+++.+++++.+++......
T Consensus 149 l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~~~---~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 225 (393)
T 1mdo_A 149 LGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCA---EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQ 225 (393)
T ss_dssp HHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSCSS---SCEEEEESCHHHHHHHHHHTBTTEECC-----
T ss_pred HHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCccccc---cceEEEeCCHHHHHHHHHHHhcCCcccchhhh
Confidence 478899999999999755322222246 999999998 999863 4788877666776666543221
Q ss_pred ------------cC--CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 68 ------------EG--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 68 ------------~g--~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
.| ..+++..+.+.+..++.+..+.++..+++..+.+.|++.+
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~ 281 (393)
T 1mdo_A 226 SGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQAMADLP 281 (393)
T ss_dssp ------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred cccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 01 1246666666667777777778888889999999999887
No 70
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=98.96 E-value=4.2e-09 Score=94.11 Aligned_cols=111 Identities=15% Similarity=0.179 Sum_probs=73.9
Q ss_pred CccccCCEEEEecCCCCCC----CcCcc-c-----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPV----LSRPL-E-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~----~~~pl-~-----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
+|+++|++||+|++++... ...++ . .+.++++.|++|.++..+..+ |+++++++++.+.+.......+.
T Consensus 222 l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~-G~~~~~~~~l~~~~~~~~~~~~~ 300 (421)
T 3l8a_A 222 LCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKN-SFAIIQNESLRRKFQYRQLANNQ 300 (421)
T ss_dssp HHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCC-EEEECCSHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhhe-EeEEcCCHHHHHHHHHHHHhccc
Confidence 4789999999999975321 11122 1 244599999999998666555 45556656777766655433332
Q ss_pred -CCChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcCCCee
Q 027424 71 -GLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVK 112 (223)
Q Consensus 71 -~~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~p~v~ 112 (223)
+.+|..+..+...++. +..+.++..++...+.+.|+++|.+.
T Consensus 301 ~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~ 347 (421)
T 3l8a_A 301 HEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIK 347 (421)
T ss_dssp SCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCE
T ss_pred CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 4677666655555553 45566778888999999999887763
No 71
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=98.96 E-value=1.6e-08 Score=89.13 Aligned_cols=177 Identities=18% Similarity=0.224 Sum_probs=105.3
Q ss_pred CccccCCEEEEecCCCCCCC----cCcccC-----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-H-HhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLEL-----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-Q-NAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~~-----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-~-~~~g 69 (223)
+|+++|+++|+|++++.... ....+. ++|+++.|++|.++..+ |+++++ +++.+.+... . ....
T Consensus 198 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G----G~~~~~-~~~~~~l~~~~~~~~~~ 272 (398)
T 3a2b_A 198 IANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG----GFVAGD-ADVIDFLKHNARSVMFS 272 (398)
T ss_dssp HHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC----EEEEEC-HHHHHHHHHHCHHHHSS
T ss_pred HHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC----cEEEeC-HHHHHHHHHhcccceec
Confidence 47899999999999975532 112221 37999999999998433 777665 5666666543 2 2233
Q ss_pred CCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
...+|..+..+...|+.+ ..+.++..++...+.+.|++. ++ ++. | ..|.++.+.+...
T Consensus 273 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~-~----------------~~g~~~~~~~~~~ 333 (398)
T 3a2b_A 273 ASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH-GF-DLG-A----------------TESPILPIFIRSN 333 (398)
T ss_dssp BCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-TC-CBC-S----------------CCSSEEEEECCCH
T ss_pred CCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-CC-CcC-C----------------CCCCEEEEEcCCH
Confidence 345665444445566554 345577778888888899876 33 121 1 1367888888543
Q ss_pred HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhcC
Q 027424 147 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 221 (223)
Q Consensus 147 ~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~~~ 221 (223)
....+|.+.|.--.+.+.-|.... .+ -.++.+|||++. |+.+.+++.|+++++..
T Consensus 334 ~~~~~l~~~l~~~gi~v~~~~~~~------------~~--------~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 334 EKTFWVTKMLQDDGVFVNPVVSPA------------VP--------AEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp HHHHHHHHHHHHTTEECEEECTTT------------SC--------GGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCcEEEeeCCCC------------CC--------CCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 334445444321111112121110 00 024789999996 45677778888877654
No 72
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=98.96 E-value=8.2e-09 Score=91.66 Aligned_cols=173 Identities=18% Similarity=0.217 Sum_probs=106.8
Q ss_pred CccccCCEEEEecCCCCCCCc---------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH--HHhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~---------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~--~~~~g 69 (223)
+|+++|++||+|++++...+- ..+...+||++.|++|.+++. +|++++++ ++.+.+... ....+
T Consensus 211 la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~----gg~v~~~~-~~~~~~~~~~~~~~~~ 285 (409)
T 3kki_A 211 ISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR----AGAIWCNN-EVNRCVPFISYPAIFS 285 (409)
T ss_dssp HHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS----CEEEEESS-SGGGTHHHHCHHHHHS
T ss_pred HHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC----ceEEEECH-HHHHHHHHhCcCcccc
Confidence 478999999999998653221 112225799999999999975 58787765 444444332 22334
Q ss_pred CCCChHhHHHHHhcHHHH---HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH
Q 027424 70 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 146 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~ 146 (223)
...+|..+..+..+++.+ ..+.++..++...+.+.|++.. + . . .+.|.++.+.+...
T Consensus 286 ~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~--~----------------~~~~~~~~~~~~~~ 345 (409)
T 3kki_A 286 STLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLG-L-T--I----------------RSESQIIGLETGDE 345 (409)
T ss_dssp BCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTT-C-C--C----------------CCSSSEEEEEEESH
T ss_pred CCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-C-c--c----------------CCCCCEEEEEeCCH
Confidence 456776666666677665 3445677788888999998762 1 1 1 12577888888554
Q ss_pred HHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 027424 147 ALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 219 (223)
Q Consensus 147 ~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~ 219 (223)
....+|.+.| +++-. + + ..|.. .-.++.|||+++. |+.+.+++-|+++++
T Consensus 346 ~~~~~~~~~L~~~Gv~v~-~--~------~~~~~--------------~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~ 402 (409)
T 3kki_A 346 RNTEKVRDYLESNGVFGS-V--F------CRPAT--------------SKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVN 402 (409)
T ss_dssp HHHHHHHHHHHHTTEECE-E--E------CTTSS--------------CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCceEe-e--e------CCCCc--------------CCCCcEEEEEccCCCCHHHHHHHHHHHHHHHh
Confidence 4444454443 33211 1 0 01100 0135789999984 456777777777776
Q ss_pred cC
Q 027424 220 TG 221 (223)
Q Consensus 220 ~~ 221 (223)
..
T Consensus 403 ~~ 404 (409)
T 3kki_A 403 YG 404 (409)
T ss_dssp HS
T ss_pred cC
Confidence 53
No 73
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=98.95 E-value=1.9e-08 Score=88.54 Aligned_cols=179 Identities=17% Similarity=0.135 Sum_probs=107.3
Q ss_pred CccccCCEEEEecCCCCCC-----CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC-CCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-----~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g-~~~sp 74 (223)
+|+++|+++|+|++++.++ ...+++ .+|+++.|++|.++|.. +|+++++++++.+.+........ .+.++
T Consensus 186 l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g~~---~G~~~~~~~~~~~~l~~~~~~~~~~~~~~ 261 (407)
T 2dkj_A 186 IADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVTSTTHKTLRGPR---GGLILSNDPELGKRIDKLIFPGIQGGPLE 261 (407)
T ss_dssp HHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEEEEESSGGGCCCS---CEEEEESCHHHHHHHHHHHTTTTCSSCCH
T ss_pred HHHHcCCEEEEEccccccccccCccCCccc-cccEEEEeccccCCCCC---ceEEEECCHHHHHHHHhhhcccccCCCcH
Confidence 4789999999999976422 123344 38999999999998653 58787765667666655442221 12344
Q ss_pred HhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC----C
Q 027424 75 FDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG----S 145 (223)
Q Consensus 75 ~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~----~ 145 (223)
.....+..+++. +..+.++..+++..+.+.|++. ++ ++..| .+.|.++.|++. +
T Consensus 262 ~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~---------------~~~~~~~~~~~~~~~~~ 324 (407)
T 2dkj_A 262 HVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GY-RIVTG---------------GTDNHLFLVDLRPKGLT 324 (407)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TC-EEGGG---------------SCSSSEEEEECGGGTCC
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-Cc-eeecC---------------CCCceEEEEECcccCCC
Confidence 222233344443 3455677888889999999887 43 33221 124778888873 3
Q ss_pred HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec--------CCCHHHHHHHHHHH
Q 027424 146 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLISDLDKA 217 (223)
Q Consensus 146 ~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--------lEd~~dL~~dl~~A 217 (223)
.+...+.+..-++. +.-|.. | .|... .+ .++.+|+|++ -|+.+.+++-|+++
T Consensus 325 ~~~~~~~l~~~gi~---v~~~~~------~---~~~~~-------~~-~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 384 (407)
T 2dkj_A 325 GKEAEERLDAVGIT---VNKNAI------P---FDPKP-------PR-VTSGIRIGTPAITTRGFTPEEMPLVAELIDRA 384 (407)
T ss_dssp HHHHHHHHHHTTEE---CEECCC------T---TCSSC-------TT-TCSEEEEECHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCce---ecCCcC------c---ccccc-------cc-CCCceeeecccccccCCCHHHHHHHHHHHHHH
Confidence 33333334433433 222211 1 01000 01 2467999994 46789999999988
Q ss_pred Hhc
Q 027424 218 LRT 220 (223)
Q Consensus 218 l~~ 220 (223)
++.
T Consensus 385 ~~~ 387 (407)
T 2dkj_A 385 LLE 387 (407)
T ss_dssp HHH
T ss_pred Hhc
Confidence 865
No 74
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=98.95 E-value=9.5e-09 Score=89.05 Aligned_cols=137 Identities=14% Similarity=0.126 Sum_probs=81.4
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCC-cEEEecccccccCCcccceeEEEecChhHHHHHHHHH------------Hh
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGA-DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ------------NA 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GA-Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~------------~~ 67 (223)
|++++|++||+|++++.+. .|+.++. |+++.|+||+++..+ + |++++++ ++.+++.... ..
T Consensus 161 i~~~~~~~li~D~a~~~~~--~~~~~~~~di~~~s~sK~~~~~G--~-G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (360)
T 1w23_A 161 FPEINHAPLIADMSSDILS--RPLKVNQFGMIYAGAQKNLGPSG--V-TVVIVKK-DLLNTKVEQVPTMLQYATHIKSDS 234 (360)
T ss_dssp CCCCCSSCEEEECTTTTTS--SCCCGGGCSEEEEETTTTTSCTT--C-EEEEEEH-HHHCSCCTTCCGGGCHHHHHHTTT
T ss_pred ccccCCceEEEechhhcCC--CCcCcccCCEEEEEcccccCCCC--c-EEEEEcH-HHHhhcccCCcchhhhhhhhhccC
Confidence 3457999999999986543 2333332 999999999997544 3 5565654 3333221110 01
Q ss_pred cCCCCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 68 EGSGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 68 ~g~~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
...+.++...+.+..+++.+ ..+.++..+++..+.+.|++.|.+..+.- .|.. ..+.+++|
T Consensus 235 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~~--------~~~~~~~~ 301 (360)
T 1w23_A 235 LYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHA-----EKGS--------RSLMNVTF 301 (360)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESS-----CGGG--------BCSSEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccC-----Cchh--------ccCcEEEE
Confidence 11234444445556666643 34567788899999999998875312210 1111 13458899
Q ss_pred EeCCHHHHHHHHhhc
Q 027424 142 LTGSLALSKHVVETT 156 (223)
Q Consensus 142 ~~~~~~~~~~f~~~l 156 (223)
.+.+.....+|++.|
T Consensus 302 ~~~~~~~~~~~~~~l 316 (360)
T 1w23_A 302 NLRNEELNQQFLAKA 316 (360)
T ss_dssp ECSSHHHHHHHHHHH
T ss_pred EcCCCccHHHHHHHH
Confidence 886544566677664
No 75
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=98.93 E-value=1.9e-09 Score=95.07 Aligned_cols=109 Identities=14% Similarity=0.052 Sum_probs=75.0
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc------cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl------~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
+|+++|+++|+|++++.... ..++ ..+.++++.|++|.++..+..+| ++++ ++++.+.+.........
T Consensus 207 ~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G-~~~~-~~~~~~~l~~~~~~~~~ 284 (407)
T 3nra_A 207 LAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLG-VAFG-SRAIIARMEKLQAIVSL 284 (407)
T ss_dssp HHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCE-EEEE-CHHHHHHHHHHHHHHTS
T ss_pred HHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEE-EEEc-CHHHHHHHHHHHhhhcc
Confidence 47899999999999864221 1111 24567999999999986665554 5555 45677777666555555
Q ss_pred CCChHhHHHHHhcHH----HHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 71 GLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 71 ~~sp~da~ll~~~l~----tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
+.++...+.+...++ .+..+.++..++...+.+.|+++|.+
T Consensus 285 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 329 (407)
T 3nra_A 285 RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGV 329 (407)
T ss_dssp SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 556665555555543 25666788888899999999988765
No 76
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=98.93 E-value=4.7e-09 Score=90.96 Aligned_cols=168 Identities=10% Similarity=0.099 Sum_probs=104.1
Q ss_pred ccCCEEEEecCCCCCCCc----CcccC-----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 4 AHGALLLVDNSIMSPVLS----RPLEL-----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 4 ~~g~~lvVDnT~~s~~~~----~pl~~-----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
++|+++|+|++++..... .++.. +.++++.|++|.++..+..+ |+++. ++++.+.+...... .+.++
T Consensus 171 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~-G~~~~-~~~~~~~~~~~~~~--~~~~~ 246 (354)
T 3ly1_A 171 PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRV-GYAVA-HPTVIALMGRYVAG--EKINF 246 (354)
T ss_dssp CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCC-EEEEC-CHHHHHHHGGGTTC--SCCCH
T ss_pred CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhh-eeeec-CHHHHHHHHHhcCC--CCCCH
Confidence 589999999998633221 22222 56699999999996555555 44545 45666665543333 34667
Q ss_pred HhHHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-CHHHHH
Q 027424 75 FDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSK 150 (223)
Q Consensus 75 ~da~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~~~~~~ 150 (223)
...+.+...++. +..+.++..++...+.+.|+++ .+. + +| +.|..+.+++. +.+...
T Consensus 247 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~-~~----------------~~~~~~~~~~~~~~~~~~ 307 (354)
T 3ly1_A 247 SGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLP-Y-LP----------------SEGNFVFHQLVVPLKDYQ 307 (354)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CC----------------CCSSEEEEECSSCHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CC----------------CCceEEEEECCCCHHHHH
Confidence 666655555543 5666788888999999999887 332 1 12 14566777774 333333
Q ss_pred HHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC-CHHHHHHHHHHHHhcC
Q 027424 151 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-DVNDLISDLDKALRTG 221 (223)
Q Consensus 151 ~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE-d~~dL~~dl~~Al~~~ 221 (223)
+.+..-++. ++ |.. + + .++.+|||++-+ |.+.+++.|++++++.
T Consensus 308 ~~l~~~gi~---v~-g~~------~----------------~-~~~~iRis~~~~~~i~~~~~~l~~~l~~~ 352 (354)
T 3ly1_A 308 THMADAGVL---IG-RAF------P----------------P-ADNWCRISLGTPQEMQWVADTMREFRKKS 352 (354)
T ss_dssp HHHHHTTEE---CC-CCC------T----------------T-CTTEEEEECCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCEE---Ee-ecC------C----------------C-CCCEEEEEcCCHHHHHHHHHHHHHHHHhh
Confidence 333332332 23 321 0 0 357899999954 5788888888888754
No 77
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=98.92 E-value=7.4e-09 Score=90.39 Aligned_cols=178 Identities=16% Similarity=0.174 Sum_probs=103.2
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--------------
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------------- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-------------- 65 (223)
+|+++|+++|+|++++.+. ....-..|+|+++.|.+|+++|... .|+++++ +++.+.+....
T Consensus 173 l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (393)
T 3kgw_A 173 LCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPG--ISLISFN-DKAKYKVYSRKTKPVSFYTDITYLA 249 (393)
T ss_dssp HHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSS--CEEEEEC-HHHHHHHHTCSSCCSCSTTCHHHHH
T ss_pred HHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCc--eeEEEEC-HHHHHHHhccCCCCCceeecHHHHH
Confidence 4789999999999986332 2333346899999999998865432 4666555 45555543211
Q ss_pred Hhc---------CCCCChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhh
Q 027424 66 NAE---------GSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 131 (223)
Q Consensus 66 ~~~---------g~~~sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~ 131 (223)
... ..+.++...+.+...++. +..+.++..+++..+.+.|++. .+ ++..|. +
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~----~-------- 315 (393)
T 3kgw_A 250 KLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GL-KFFVKD----P-------- 315 (393)
T ss_dssp HHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC-CBSSSS----G--------
T ss_pred HhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CC-eeccCC----h--------
Confidence 111 123344444444455553 3455678888899999999887 33 222221 0
Q ss_pred hCCCCeeEEEEeC---CHHH-HHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEe-cC--
Q 027424 132 AKGAGSVLSFLTG---SLAL-SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-GI-- 204 (223)
Q Consensus 132 ~~g~ggl~sf~~~---~~~~-~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsv-Gl-- 204 (223)
....+.++.|.+. +.+. .+++.++.++. +.-|.. + ..++.+|+|+ |.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~------~-----------------~~~~~iRi~~~~~~~ 369 (393)
T 3kgw_A 316 EIRLPTITTVTVPAGYNWRDIVSYVLDHFSIE---ISGGLG------P-----------------TEERVLRIGLLGYNA 369 (393)
T ss_dssp GGBCSSEEEEECCTTBCHHHHHHHHHHHHCEE---CBCCCG------G-----------------GTTTEEEEECCGGGC
T ss_pred hhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEE---EeCCcc------c-----------------CCCCEEEEEecccCC
Confidence 0124566778773 2222 23333332332 121210 0 1356899998 75
Q ss_pred --CCHHHHHHHHHHHHhcC
Q 027424 205 --EDVNDLISDLDKALRTG 221 (223)
Q Consensus 205 --Ed~~dL~~dl~~Al~~~ 221 (223)
||.+.+++.|+++++..
T Consensus 370 ~~~~i~~~~~~l~~~l~~~ 388 (393)
T 3kgw_A 370 TTENVDRVAEALREALQHC 388 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 56788888888888754
No 78
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=98.91 E-value=4.7e-09 Score=91.93 Aligned_cols=106 Identities=19% Similarity=0.119 Sum_probs=71.9
Q ss_pred CccccCCEEEEecCCCCCCC----cCcccC----CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~~----GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|+++|+|++++.... ..++++ +.++++.|++|.++..+..+| +++. ++++.+.+.......+.+.
T Consensus 186 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~-~~~~~~~l~~~~~~~~~~~ 263 (376)
T 2dou_A 186 LARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLG-FALG-SEEALARLERVKGVIDFNQ 263 (376)
T ss_dssp HHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCE-EEEE-CHHHHHHHHHHHHHHCCCS
T ss_pred HHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeE-EEec-CHHHHHHHHHHHHhcccCC
Confidence 37889999999999854321 123332 567999999999976665554 4555 4567777766555544456
Q ss_pred ChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcC
Q 027424 73 APFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~ 108 (223)
++...+.+...++. +..+.++..++...+.+.|+++
T Consensus 264 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 303 (376)
T 2dou_A 264 YAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV 303 (376)
T ss_dssp CHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77666655555543 3444567778888899999887
No 79
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=98.91 E-value=6.6e-09 Score=90.50 Aligned_cols=190 Identities=17% Similarity=0.166 Sum_probs=102.9
Q ss_pred CccccCCEEEEecCCCCCCCcCccc---CCCcEEEecccccccCCcccceeEEEecChh-HHHHHHH---HHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYF---LQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~---~GADivv~S~tK~l~G~~d~~~G~v~~~~~~-~~~~l~~---~~~~~g~~~s 73 (223)
+|+++|++ |+|++++-+. .|+. +++|+++.|++|+++-.+ + |+++++++. +...+.. .......+.+
T Consensus 163 l~~~~~~~-i~D~a~~~g~--~~~~~~~~~~di~~~s~sK~~g~~g--~-G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 236 (382)
T 4eb5_A 163 VLAGKAAL-HIDATASVGQ--IEVDVEKIGADMLTISSNDIYGPKG--V-GALWIRKEAKLQPVILGGGQENGLRSGSEN 236 (382)
T ss_dssp HHTTSSEE-EEECTTTBTT--BCCCHHHHTCSEEEEETGGGTCCSS--C-EEEEEETTCCCCCSSCSSCTGGGTSCSCCC
T ss_pred HHHHCCCE-EEEcchhcCC--cccCccccCCCEEEeehHHhcCCCc--e-EEEEEccccccCceecCCCccccccCCCcc
Confidence 47899999 9999987332 2222 479999999999855222 3 445555542 2110000 0111122344
Q ss_pred hHhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHH
Q 027424 74 PFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 149 (223)
Q Consensus 74 p~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~ 149 (223)
+...+.+..+++.+ ..+.++..+++..+.+.|++.|.+ ++..| +. ...++++.|.+.+. ..
T Consensus 237 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~-----~~--------~~~~~~~~~~~~~~-~~ 301 (382)
T 4eb5_A 237 VPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEES-YLNGH-----PE--------KRLPNNVNVRFSYI-EG 301 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTE-EECSC-----SS--------SBCTTEEEEEETTS-CH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCe-EEeCC-----cc--------cCCCCEEEEEeCCc-CH
Confidence 44344444455543 445677788889999999988776 34322 10 01467888887421 12
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC----CCeEEEEecC----CCHHHHHHHHHHHHh
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGI----EDVNDLISDLDKALR 219 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~----~~liRlsvGl----Ed~~dL~~dl~~Al~ 219 (223)
.+|.+.|.--.+.++-|...+.. .+. +.......|++ ++.+|||++. ||.+.+++.|+++++
T Consensus 302 ~~~~~~l~~~gi~v~~g~~~~~~------~~~--~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (382)
T 4eb5_A 302 ESIVLSLDMAGIQASTGSACSSK------TLQ--PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp HHHHHHHHHHTCBCBCCCGGGTS------SCC--CCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEeccccccCC------CCc--ccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 23433332112223333221110 000 11223445654 6899999994 456777777777765
No 80
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=98.90 E-value=3.6e-09 Score=91.36 Aligned_cols=105 Identities=17% Similarity=0.181 Sum_probs=65.9
Q ss_pred CccccCCEEEEecCCCCCCCcCcc-cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH------------HH--
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF------------LQ-- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl-~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~------------~~-- 65 (223)
+|+++|+++|+|++++.+...-++ ++|+|+++.|++|+++|... .|++++++ ++.+++.. ..
T Consensus 156 l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 1m32_A 156 LAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPG--FAFVIARE-QKLAACKGHSRSLSLDLYAQWRCM 232 (366)
T ss_dssp HHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSS--EEEEEEEH-HHHTTCTTCCSCSTTCHHHHHHHH
T ss_pred HHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCc--eEEEEECH-HHHHhhcCCCCCccccHHHHHhhh
Confidence 478999999999998644321122 35799999999998865432 27777664 34332211 00
Q ss_pred -HhcC---CCCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcC
Q 027424 66 -NAEG---SGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 66 -~~~g---~~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~ 108 (223)
...+ .+.++...+.+...++.+ ..+.++..+++..+.+.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~ 285 (366)
T 1m32_A 233 EDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL 285 (366)
T ss_dssp HHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC
Confidence 0001 245555555566666654 334577788888899999876
No 81
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=98.90 E-value=6e-09 Score=91.64 Aligned_cols=141 Identities=13% Similarity=0.153 Sum_probs=89.6
Q ss_pred CccccCCEEEEecCCCCCCCcC--cc-cCCCcEEEeccc--ccccCCcccceeEEEecChhH--HHHHHHHHHh------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR--PL-ELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERL--AKELYFLQNA------ 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~--pl-~~GADivv~S~t--K~l~G~~d~~~G~v~~~~~~~--~~~l~~~~~~------ 67 (223)
+|+++|+++++|++++.+.... ++ .+| |+++.|++ |.++|. .+|+++.+++.+ .+.++.....
T Consensus 148 la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~S~s~~K~l~g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (388)
T 1b9h_A 148 ISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATFSFQNGKLMTAG---EGGAVVFPDGETEKYETAFLRHSCGRPRDD 223 (388)
T ss_dssp HHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEEECCTTSSSCSS---SCEEEEECTTCHHHHHHHHHHTBTTCCTTC
T ss_pred HHHHcCCEEEEecchhcCCccCCeeccccc-ceEEEEccCCCcccCC---CeEEEEECCHHHHHHHHHHHHHhCCCCccC
Confidence 4789999999999997654332 22 233 88899876 778763 378787776545 4544432210
Q ss_pred -------cCC--CCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCee
Q 027424 68 -------EGS--GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 138 (223)
Q Consensus 68 -------~g~--~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl 138 (223)
.|. .+++..++.+...++.+..++++..+++..+.+.|++.|.+ ++..|. +.. ....+.+
T Consensus 224 ~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~-~~~---------~~~~~~~ 292 (388)
T 1b9h_A 224 RRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVRDERWTLLSRLLGAIDGV-VPQGGD-VRA---------DRNSHYM 292 (388)
T ss_dssp SSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTC-EECCCC-TTC---------CBCCCSE
T ss_pred ccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc-cccCCC-cCC---------CccceEE
Confidence 022 25667777777788888888888999999999999998876 333221 100 0124678
Q ss_pred EEEEeCC--HHHHHHHHhhc
Q 027424 139 LSFLTGS--LALSKHVVETT 156 (223)
Q Consensus 139 ~sf~~~~--~~~~~~f~~~l 156 (223)
+.|.+.+ .....+|.+.|
T Consensus 293 ~~~~~~~~~~~~~~~l~~~L 312 (388)
T 1b9h_A 293 AMFRIPGLTEERRNALVDRL 312 (388)
T ss_dssp EEEECTTCCHHHHHHHHHHH
T ss_pred EEEEeCCcCcccHHHHHHHH
Confidence 8888843 12344454444
No 82
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=98.90 E-value=5e-08 Score=85.99 Aligned_cols=197 Identities=13% Similarity=0.093 Sum_probs=115.3
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcc-cceeEEEecChhHHHHHHHHHHh------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQNA------------ 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d-~~~G~v~~~~~~~~~~l~~~~~~------------ 67 (223)
+|+++|+++++|++++.+...+.-.+|++..+.|++|+.+..-. -.||+++.+++++.++++.....
T Consensus 150 l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~ 229 (390)
T 3b8x_A 150 IIGGRDIILLEDNCESMGATFNNKCAGTFGLMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKV 229 (390)
T ss_dssp HHTTSCCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETT
T ss_pred HHHHcCCEEEEECcCcccCEECCcccccccceEEEEccCCCCCccCCceEEEeCCHHHHHHHHHHHhcCCCccccccccc
Confidence 47899999999999986654455567885555565554332211 14688888776666655543210
Q ss_pred -----------------cCC--CCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHH
Q 027424 68 -----------------EGS--GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 128 (223)
Q Consensus 68 -----------------~g~--~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~ 128 (223)
.|. .+++..+++.+..++.+..+.++..+++..+.+.|++.|.+. +..| +.
T Consensus 230 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~--~~------- 299 (390)
T 3b8x_A 230 TGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLPRFISVRRKNAEYFLDKFKDHPYLD-VQQE--TG------- 299 (390)
T ss_dssp TEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE-ECCC--CS-------
T ss_pred cccccccccccccceeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-cCCC--CC-------
Confidence 111 167777888877888888889999999999999999988763 3221 10
Q ss_pred HhhhCCCCeeEEEEeC-----CHHHHHHHHhhcCcceeccccCCCCCCCCC-Cccc--cC---CCCCHHHHHhcCCCCCe
Q 027424 129 YSQAKGAGSVLSFLTG-----SLALSKHVVETTKYFSITVSFGSVKSLISM-PCFM--SH---ASIPVEVRQARGLTEDL 197 (223)
Q Consensus 129 ~~~~~g~ggl~sf~~~-----~~~~~~~f~~~l~l~~~~~s~G~~~sli~~-p~~~--~h---~~~~~~~~~~~gi~~~l 197 (223)
....-++.+.+. +.+...+.++.-++. ..+.|++. +-.. |... .| ..++..++. ..+.
T Consensus 300 ----~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~-v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 368 (390)
T 3b8x_A 300 ----ESSWFGFSFIIKKDSGVIRKQLVENLNSAGIE-CRPIVTGN--FLKNTDVLKYFDYTVHNNVDNAEYL----DKNG 368 (390)
T ss_dssp ----BCCCCEEEEEECTTSCCCHHHHHHHHHHTTBC-CBCSTTSS--GGGCHHHHTTCEEEESSCCHHHHHH----HHHE
T ss_pred ----CcccEEEEEEecCcCcccHHHHHHHHHHCCCC-eeeecCCc--hhhcchhhhcCCCCCcCCChHHHHH----hcCE
Confidence 111223444543 344455555554544 34445432 2122 3211 11 123222221 2357
Q ss_pred EEEEecCCCHHHHHHHHHHHH
Q 027424 198 VRISVGIEDVNDLISDLDKAL 218 (223)
Q Consensus 198 iRlsvGlEd~~dL~~dl~~Al 218 (223)
||||++-.-.++=++.+.++|
T Consensus 369 l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 369 LFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp EEEECCSSCCHHHHHHHHHHT
T ss_pred EEeeCCCCCCHHHHHHHHHhh
Confidence 999999887655555555554
No 83
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=98.89 E-value=4.4e-08 Score=87.26 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=76.1
Q ss_pred CccccCCEEEEecCCCCCC--CcCcccCCCcEEEecc--cccccCCcccceeEEEecChhHHHHHHHHHHh---------
Q 027424 1 MAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~--~~~pl~~GADivv~S~--tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--------- 67 (223)
+|+++|++||+|++++.+. ..+++..-.|+++.|+ +|.+++ + .+|+++.+++++.+++......
T Consensus 152 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~-g--~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 228 (418)
T 2c81_A 152 IAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTA-G--EGGIIVTKNPRLFELIQQLRADSRVYCDDSS 228 (418)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCS-S--SCEEEEESCHHHHHHHHHHHBTTEEECSCGG
T ss_pred HHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCC-C--CeEEEEECCHHHHHHHHHHHHhCcccccccc
Confidence 4789999999999987653 1223322358999998 999987 5 4787877666776666544321
Q ss_pred -----cC------------CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 68 -----EG------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 68 -----~g------------~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
+. ..+++..+.+....++.+..+.++..+++..+.+.|++.|.+
T Consensus 229 ~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~ 289 (418)
T 2c81_A 229 ELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNAIREKNAMFLNDALSKIDGI 289 (418)
T ss_dssp GCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred ccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 00 013455565666667777788888889999999999988875
No 84
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=98.89 E-value=1.5e-08 Score=90.52 Aligned_cols=170 Identities=12% Similarity=0.069 Sum_probs=103.8
Q ss_pred ccc-----cCCEEEEecCCCCCCC----cCcc--c----CCC---cEEEecccccccCCcccceeEEEe--cChhHHHHH
Q 027424 2 AHA-----HGALLLVDNSIMSPVL----SRPL--E----LGA---DIVMHSATKFIAGHSDVMAGVLAV--KGERLAKEL 61 (223)
Q Consensus 2 a~~-----~g~~lvVDnT~~s~~~----~~pl--~----~GA---Divv~S~tK~l~G~~d~~~G~v~~--~~~~~~~~l 61 (223)
|++ +|+++|+|++++.... ..++ . .+. ++++.|++|.++.++..+|. +++ +++++.+.+
T Consensus 218 ~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~-~~~~~~~~~~~~~l 296 (430)
T 2x5f_A 218 IKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGF-MTFGTSDQTTKEVL 296 (430)
T ss_dssp HHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEE-EEEBCCCHHHHHHH
T ss_pred HHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEE-EEEecCCHHHHHHH
Confidence 567 9999999999864321 1232 1 244 68899999999867777665 545 245666666
Q ss_pred HHHHHh----cCCCCChHhHHHHHhcHH-H---HHH---HHHHHHhHHHHHHHHHhcC--C-CeeEEEcCCCCCCcchHH
Q 027424 62 YFLQNA----EGSGLAPFDCWICLRGVK-T---MAL---RVEKQQDNAQKIAEFLASH--P-RVKKVNYAGLPEHPGHEL 127 (223)
Q Consensus 62 ~~~~~~----~g~~~sp~da~ll~~~l~-t---l~~---R~~~~~~na~~la~~L~~~--p-~v~~V~yP~l~~~~~~~~ 127 (223)
...... ...+.++...+.+...|+ . ... +.++..++...+.+.|+++ + .+ ++.-|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~-~~~~~---------- 365 (430)
T 2x5f_A 297 EAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHW-QAYDF---------- 365 (430)
T ss_dssp HHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTE-EECCC----------
T ss_pred HHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc-eeeCC----------
Confidence 554433 334567777777777777 3 232 4566778888888999843 1 33 22212
Q ss_pred HHhhhCCCCee-EEEEeC--CHH-HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec
Q 027424 128 HYSQAKGAGSV-LSFLTG--SLA-LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG 203 (223)
Q Consensus 128 ~~~~~~g~ggl-~sf~~~--~~~-~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG 203 (223)
.||+ +.+.+. +.. ..+++.+.-++. +.-| .++.+|||++
T Consensus 366 -------~~g~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g---------------------------~~~~iRis~~ 408 (430)
T 2x5f_A 366 -------NSGYFMAIKVHDVDPEALRKHLIDKYSIG---VIAL---------------------------NATDIRIAFS 408 (430)
T ss_dssp -------CBSSEEEEEESSSCHHHHHHHHHHHHCEE---CEEC---------------------------SSSEEEEEGG
T ss_pred -------CceEEEEeCCCCCCHHHHHHHHHHhCCEE---EecC---------------------------CCCeEEEEEe
Confidence 2444 666664 222 223332212222 1111 2467999999
Q ss_pred ---CCCHHHHHHHHHHHHhc
Q 027424 204 ---IEDVNDLISDLDKALRT 220 (223)
Q Consensus 204 ---lEd~~dL~~dl~~Al~~ 220 (223)
-|+.+.+++.|+++++.
T Consensus 409 ~~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 409 CVEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp GSCGGGHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 56688888888888764
No 85
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=98.89 E-value=1.8e-08 Score=91.96 Aligned_cols=172 Identities=13% Similarity=0.167 Sum_probs=102.6
Q ss_pred CccccCCEEEEecCCCCC------------C-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-HH
Q 027424 1 MAHAHGALLLVDNSIMSP------------V-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------------~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-~~ 66 (223)
+||++|++|+||++++.. . .+++...|+|+++.|.+|++.|+. -.|+++++++.+....... ..
T Consensus 231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~ 308 (497)
T 3mc6_A 231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPK--GSSVIMYRNSDLRMHQYYVNPA 308 (497)
T ss_dssp HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCS--SCEEEECSSHHHHTTTSCCBTT
T ss_pred HHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCC--CceeEEecCHHHHhhhhccccc
Confidence 478999999999998732 1 134455699999999999986542 2466767665432211000 01
Q ss_pred hcCCC---C---C------hHhHHHHHhcHHH--HHHHHHHHHhHHHHHHHHHhcC-CCeeEEEcCCCCCCcchHHHHhh
Q 027424 67 AEGSG---L---A------PFDCWICLRGVKT--MALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQ 131 (223)
Q Consensus 67 ~~g~~---~---s------p~da~ll~~~l~t--l~~R~~~~~~na~~la~~L~~~-p~v~~V~yP~l~~~~~~~~~~~~ 131 (223)
..+.. . + ....|..++.+.. +..++++..+++..+++.|+++ |.+. +..|
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~-~~~~-------------- 373 (497)
T 3mc6_A 309 WTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLD-IMGN-------------- 373 (497)
T ss_dssp CTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCE-ECSC--------------
T ss_pred ccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE-EecC--------------
Confidence 11110 0 0 2224444444443 4667789999999999999994 7763 4333
Q ss_pred hCCCCeeEEEEeCC--HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec---CCC
Q 027424 132 AKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IED 206 (223)
Q Consensus 132 ~~g~ggl~sf~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG---lEd 206 (223)
..+++++|...+ .....+.+..-++. .+.+. .+..+|+++. .|+
T Consensus 374 --~~~~~v~~~~~~~~~~~l~~~L~~~Gi~---v~~~~--------------------------~~~~~ri~~~~~t~e~ 422 (497)
T 3mc6_A 374 --PRYSVISFSSKTLNIHELSDRLSKKGWH---FNALQ--------------------------KPVALHMAFTRLSAHV 422 (497)
T ss_dssp --CCSSEEEEECTTTTHHHHHHHHHTTTCB---CEECC--------------------------SSCCEEEECCTTTTCT
T ss_pred --CCeeEEEEeCCCCCHHHHHHHHHhCCEE---EecCC--------------------------CCCeEEEEEeCCCHHH
Confidence 146788888642 22232223222322 11000 1223677775 788
Q ss_pred HHHHHHHHHHHHhc
Q 027424 207 VNDLISDLDKALRT 220 (223)
Q Consensus 207 ~~dL~~dl~~Al~~ 220 (223)
.++++++|+++++.
T Consensus 423 i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 423 VDEICDILRTTVQE 436 (497)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999874
No 86
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=98.88 E-value=6.3e-09 Score=91.43 Aligned_cols=106 Identities=10% Similarity=0.112 Sum_probs=70.8
Q ss_pred CccccCCEEEEecCCCCCCCc----Ccc-c----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----RPL-E----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~pl-~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++..... .++ . .+.|+++.|++|.++..+..+ |+++++ +++.+.+.........+
T Consensus 188 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~-~~~~~~l~~~~~~~~~~ 265 (389)
T 1gd9_A 188 FVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRL-GFVAAP-SWIIERMVKFQMYNATC 265 (389)
T ss_dssp HHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCC-EEEECC-HHHHHHHHHHHTTTTCS
T ss_pred HHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccce-EEEEEC-HHHHHHHHHHHhhhccC
Confidence 378999999999998654321 112 2 357999999999997666555 556554 56767776555444445
Q ss_pred CChHhHHHHHhcHHH------HHHHHHHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~t------l~~R~~~~~~na~~la~~L~~~ 108 (223)
.++...+.+...|+. +..+.++..++...+.+.|+++
T Consensus 266 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (389)
T 1gd9_A 266 PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM 308 (389)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 666655555555543 2334466778888888889886
No 87
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=98.88 E-value=8.2e-08 Score=83.72 Aligned_cols=104 Identities=14% Similarity=0.013 Sum_probs=71.1
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc---------cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl---------~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~ 67 (223)
+|+++|+++|+|++++.... ...+ ..+.++++.|++|.++..+..+|. ++. ++++.+.+......
T Consensus 182 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~-~~~-~~~~~~~~~~~~~~ 259 (376)
T 3ezs_A 182 LALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGF-IAG-DSRLLEKYKAFRAY 259 (376)
T ss_dssp HHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEE-EEE-CHHHHHHHHHHHTT
T ss_pred HHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEE-Eee-CHHHHHHHHHHHhh
Confidence 37899999999999865322 1111 457889999999999766666655 544 55677777666555
Q ss_pred cCCCCChHhHHHHHhcHHH---HHHHHHHHHhHHHHHHHHHh
Q 027424 68 EGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLA 106 (223)
Q Consensus 68 ~g~~~sp~da~ll~~~l~t---l~~R~~~~~~na~~la~~L~ 106 (223)
.+.+.++...+.+...++. +..+.++..++...+.+.|+
T Consensus 260 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 301 (376)
T 3ezs_A 260 LGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK 301 (376)
T ss_dssp TCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST
T ss_pred hcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 5556677666666666654 44455666777777777776
No 88
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=98.88 E-value=7e-09 Score=91.10 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=73.6
Q ss_pred CccccCCEEEEecCCCCCCC-------cCccc---CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~---~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
+|+++|+++|+|++++.... ...+. .+.|+++.|++|+++.++..+ |++++ ++++.+.+.........
T Consensus 191 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~-G~~~~-~~~~~~~l~~~~~~~~~ 268 (388)
T 1j32_A 191 VAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRV-GFLAG-PVPLVKAATKIQGHSTS 268 (388)
T ss_dssp HHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCC-EEEEC-CHHHHHHHHHHHHTTTC
T ss_pred HHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccce-EEEEe-CHHHHHHHHHHHhhccc
Confidence 37889999999999864321 11121 468999999999997666555 55555 45676766665554444
Q ss_pred CCChHhHHHHHhcHH----HHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 71 GLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 71 ~~sp~da~ll~~~l~----tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
..++...+.+...++ .+..+.++..++...+.+.|++.|.+
T Consensus 269 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 313 (388)
T 1j32_A 269 NVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGL 313 (388)
T ss_dssp SCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred CCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 566665555555554 24455677788888999999988765
No 89
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=98.87 E-value=1.3e-08 Score=90.33 Aligned_cols=106 Identities=8% Similarity=-0.000 Sum_probs=71.7
Q ss_pred CccccCCEEEEecCCCCCCC-------cCccc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++.... ...+. .+.|+++.|++|+++..+..+| ++++ ++++.+.+.......+.+
T Consensus 200 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~-~~~~~~~l~~~~~~~~~~ 277 (412)
T 2x5d_A 200 LAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIG-FMVG-NPELVSALARIKSYHDYG 277 (412)
T ss_dssp HHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCE-EEEE-CHHHHHHHHHHHHHHCCC
T ss_pred HHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceE-EEEc-CHHHHHHHHHHHhhhccC
Confidence 37889999999999865331 11121 3678999999999976665554 4555 456767776655544455
Q ss_pred CChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~ 108 (223)
.++...+.+...|+. +....++..++...+.+.|+++
T Consensus 278 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (412)
T 2x5d_A 278 TFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA 318 (412)
T ss_dssp CCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 677766666666654 3444566778888888888876
No 90
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=98.87 E-value=8.9e-09 Score=89.98 Aligned_cols=106 Identities=11% Similarity=0.167 Sum_probs=72.8
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|+++|+|++++.... ..... .+.|+++.|++|.++..+..+ |+++++ +++.+.+.........+.
T Consensus 178 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~-~~~~~~~~~~~~~~~~~~ 255 (370)
T 2z61_A 178 FAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRI-GYVISN-DEIIEAILKLQQNLFISA 255 (370)
T ss_dssp HHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCC-EEEECC-HHHHHHHHHHHHHHTSSS
T ss_pred HHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceE-EEEEEC-HHHHHHHHHHHhhcccCC
Confidence 47899999999999864322 12222 378999999999997566554 556554 467777766555444456
Q ss_pred ChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcC
Q 027424 73 APFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~ 108 (223)
++...+.+...|+. +..+.++..++...+.+.|+++
T Consensus 256 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 256 PTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp CHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 77777777777754 2334466677888888888876
No 91
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=98.87 E-value=3.5e-08 Score=87.92 Aligned_cols=180 Identities=15% Similarity=0.116 Sum_probs=106.9
Q ss_pred CccccCCEEEEecCCCCCCC--cCcc------------cCCCcEEEecccccccCCcccceeEEEecChhHHH-H-----
Q 027424 1 MAHAHGALLLVDNSIMSPVL--SRPL------------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-E----- 60 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~--~~pl------------~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~-~----- 60 (223)
+|+++|+++|+|++++.... ..|+ ..+.++++.|++|.++..+..+| +++++ +++.+ .
T Consensus 210 ~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~-~~~~~~~~~~~~ 287 (437)
T 3g0t_A 210 LATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIG-VLMIS-GKLYEREYPDLE 287 (437)
T ss_dssp HHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCE-EEEEC-HHHHHCBCGGGH
T ss_pred HHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeE-EEEEC-HHHhhhhhhccc
Confidence 47899999999999863211 1122 24667999999999976665554 45554 45555 4
Q ss_pred ------------HHHHHHhcCCCCChHhHHHHHhcHHH-------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCC
Q 027424 61 ------------LYFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 121 (223)
Q Consensus 61 ------------l~~~~~~~g~~~sp~da~ll~~~l~t-------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~ 121 (223)
+.........+.++...+.+...++. +..+.++..++...+.+.|+++ .+ ++.+|.-..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~ 365 (437)
T 3g0t_A 288 ESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GF-NIVYDKDGN 365 (437)
T ss_dssp HHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TE-EESSCEETT
T ss_pred ccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CC-EEeccccCC
Confidence 44444333345677777777777766 4455688888999999999988 44 444221100
Q ss_pred CcchHHHHhhhCCCCeeEEEEeC--CHHH-HHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCC-CCCe
Q 027424 122 HPGHELHYSQAKGAGSVLSFLTG--SLAL-SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL-TEDL 197 (223)
Q Consensus 122 ~~~~~~~~~~~~g~ggl~sf~~~--~~~~-~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi-~~~l 197 (223)
.| ...|..+.+.+. +.+. .+++.++ ++. +.-|... +. .++.
T Consensus 366 ~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~-gi~---v~~~~~~----------------------~~~~~~~ 410 (437)
T 3g0t_A 366 EP---------LADGFYFTVGYKGMDSSKLIEKFVRY-GMC---AITLKTT----------------------GSKRNEA 410 (437)
T ss_dssp EE---------CCSSSEEEEEETTCCHHHHHHHHHHT-TEE---CEESTTT----------------------TCCCTTC
T ss_pred CC---------CceeEEEEEecCCCCHHHHHHHHHHc-CeE---Eeecccc----------------------CCCCCCE
Confidence 01 023555666664 3222 2332222 332 1111110 00 2367
Q ss_pred EEEEecC---CCHHHHHHHHHHHHh
Q 027424 198 VRISVGI---EDVNDLISDLDKALR 219 (223)
Q Consensus 198 iRlsvGl---Ed~~dL~~dl~~Al~ 219 (223)
+|||+|. |+.+.+++.|.++++
T Consensus 411 iRis~~~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 411 MRICTSLLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp EEEECSSSCGGGHHHHHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHh
Confidence 9999995 567777777777765
No 92
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=98.87 E-value=6.8e-09 Score=93.90 Aligned_cols=180 Identities=13% Similarity=0.053 Sum_probs=103.2
Q ss_pred cCCEEEEecCCCCCCC---cC--ccc---CCCcEEEecccccccCCcccceeEEEecChhHH-HHHHHHHHhcCC-----
Q 027424 5 HGALLLVDNSIMSPVL---SR--PLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNAEGS----- 70 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~---~~--pl~---~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~-~~l~~~~~~~g~----- 70 (223)
+|++++||++++.... .. +.. .|+|+++.|.||++.++.. +|+++++++.+. +.+.....+.+.
T Consensus 222 ~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (452)
T 2dgk_A 222 IDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLG--CGWVIWRDEEALPQELVFNVDYLGGQIGTF 299 (452)
T ss_dssp CCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGGGSCGGGCEEECCTTCCEEEC
T ss_pred CCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCC--eEEEEEcCHHHHHHHhccCccccCCCCCCc
Confidence 4999999999875421 11 122 2899999999998865432 567777665432 222110111110
Q ss_pred ----CC---ChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 71 ----GL---APFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 71 ----~~---sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
+. .....|..++ +.+.+..++++..+++..+++.|++.|.+ ++..|+.+. ...++++|
T Consensus 300 ~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~~~~~------------~~~~~v~f 366 (452)
T 2dgk_A 300 AINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPY-EFICTGRPD------------EGIPAVCF 366 (452)
T ss_dssp CSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSE-EEEEECCTT------------TBSSEEEE
T ss_pred ccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EEecCCCCC------------CCeEEEEE
Confidence 11 1122333333 33456777899999999999999999876 455564311 14678999
Q ss_pred EeCCH----HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHH
Q 027424 142 LTGSL----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISD 213 (223)
Q Consensus 142 ~~~~~----~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~d 213 (223)
.+.+. ....++.+.|.- .+..++.. ..|.. + . ..+.+|+|+|- ||.+.++++
T Consensus 367 ~~~~~~~~~~~~~~l~~~L~~--~Gi~v~~~----~~~~~-----~-------~--~~~~lRis~~~~~t~e~id~li~~ 426 (452)
T 2dgk_A 367 KLKDGEDPGYTLYDLSERLRL--RGWQVPAF----TLGGE-----A-------T--DIVVMRIMCRRGFEMDFAELLLED 426 (452)
T ss_dssp EECTTCCCSCCHHHHHHHHHH--TTCBCCEE----ECSTT-----C-------T--TCEEEEEECCTTCCHHHHHHHHHH
T ss_pred EecCcccccCCHHHHHHHHHh--cCCeeeee----eCCcc-----c-------C--CeEEEEEEecCCCCHHHHHHHHHH
Confidence 88431 011233333321 11111110 01110 0 0 24689999995 788999999
Q ss_pred HHHHHh
Q 027424 214 LDKALR 219 (223)
Q Consensus 214 l~~Al~ 219 (223)
|+++++
T Consensus 427 l~~~~~ 432 (452)
T 2dgk_A 427 YKASLK 432 (452)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988876
No 93
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=98.87 E-value=1e-08 Score=89.33 Aligned_cols=106 Identities=12% Similarity=0.127 Sum_probs=72.2
Q ss_pred CccccCCEEEEecCCCCCCCcCccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHh
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 76 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~d 76 (223)
+|+++|+++|+|++++......++. .+.++++.|++|.++..+..+| +++. ++++.+.+...... ...++..
T Consensus 174 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G-~~~~-~~~~~~~~~~~~~~--~~~~~~~ 249 (360)
T 3hdo_A 174 LARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIG-LAIA-RPEVIAALDKIRDH--YNLDRLA 249 (360)
T ss_dssp HHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCE-EEEC-CHHHHHHHHHHSCS--CCSCHHH
T ss_pred HHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCcccee-eEee-CHHHHHHHHHhCCC--CCCCHHH
Confidence 4678999999999986421112222 3456999999999976666655 4544 56676666554332 3467766
Q ss_pred HHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 77 CWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 77 a~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.+.+...++. +..+.++..++...+.+.|+++ .+
T Consensus 250 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~ 286 (360)
T 3hdo_A 250 QAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GY 286 (360)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 6666666654 4566788888999999999987 44
No 94
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.87 E-value=5.7e-08 Score=86.30 Aligned_cols=106 Identities=18% Similarity=0.227 Sum_probs=71.1
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|++++.... ...+. .+.|+++.|++|.++..+..+ |+++++++++.+.+........ +.++
T Consensus 202 ~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~-G~~~~~~~~l~~~l~~~~~~~~-~~~~ 279 (409)
T 2gb3_A 202 IAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARV-GCLITRNEELISHAMKLAQGRL-APPL 279 (409)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCC-EEEECSCHHHHHHHHHHHHHSC-CCCH
T ss_pred HHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceE-EEEEECcHHHHHHHHHHHhccC-CCCH
Confidence 47899999999999864321 11122 367999999999997566444 5566666467677665554443 5667
Q ss_pred HhHHHHHhcHH----HHHHHHHHHHhHHHHHHHHHhcC
Q 027424 75 FDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 75 ~da~ll~~~l~----tl~~R~~~~~~na~~la~~L~~~ 108 (223)
...+.+...|+ .+....++..++...+.+.|+++
T Consensus 280 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 317 (409)
T 2gb3_A 280 LEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH 317 (409)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 65555555553 23444566778888888889876
No 95
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=98.86 E-value=2.8e-08 Score=87.63 Aligned_cols=180 Identities=16% Similarity=0.118 Sum_probs=100.3
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--------------
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------------- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-------------- 65 (223)
+|+++|+++|+|++++.+.. .+.-++|+|+++.|.+|++.|... .|+++.+ +++.+.+....
T Consensus 161 l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g--~g~~~~~-~~~~~~~~~~~~~~~Gw~~~~~~~~ 237 (416)
T 3isl_A 161 ACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSG--MAPITYN-ERVADVIAARKKVERGIATQADRAA 237 (416)
T ss_dssp HHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSS--EEEEEEC-HHHHHHHHTC---------------
T ss_pred HHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccCCCCC--eEEEEEC-HHHHHHhhccccccccccccccchh
Confidence 47899999999999865433 333446899999999998766542 4666554 45555443110
Q ss_pred ------------------H------hcCCCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEc
Q 027424 66 ------------------N------AEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNY 116 (223)
Q Consensus 66 ------------------~------~~g~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~y 116 (223)
. ....+.+......+..+++.+ ..+.++..+++..+.+.|++. .+ ++..
T Consensus 238 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~ 315 (416)
T 3isl_A 238 LSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GL-RLFG 315 (416)
T ss_dssp ---CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC-CBCS
T ss_pred ccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CC-Eecc
Confidence 0 011123343333444455443 345577778888888888873 43 2222
Q ss_pred CCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHhhcC-cceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCC
Q 027424 117 AGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 195 (223)
Q Consensus 117 P~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~-l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~ 195 (223)
| + ....+.++.|.+.......+|.+.|. -..+.++-|. . ...+
T Consensus 316 ~-----~--------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~------~-----------------~~~~ 359 (416)
T 3isl_A 316 D-----D--------SCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSF------G-----------------PLAG 359 (416)
T ss_dssp C-----G--------GGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCC------S-----------------TTTT
T ss_pred C-----c--------cccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCC------C-----------------CCCC
Confidence 2 0 01247788888731111223333331 1112222221 0 1245
Q ss_pred CeEEEEe-c---CCC-HHHHHHHHHHHHhcC
Q 027424 196 DLVRISV-G---IED-VNDLISDLDKALRTG 221 (223)
Q Consensus 196 ~liRlsv-G---lEd-~~dL~~dl~~Al~~~ 221 (223)
+.+|||+ + -|+ .+.+++.|+++++..
T Consensus 360 ~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 360 KIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp TEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 7899999 3 234 677788888777643
No 96
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=98.86 E-value=4.9e-08 Score=85.87 Aligned_cols=179 Identities=16% Similarity=0.193 Sum_probs=104.8
Q ss_pred CccccCCEEEEecCCCCC-----CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC-CCCCh
Q 027424 1 MAHAHGALLLVDNSIMSP-----VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-----~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g-~~~sp 74 (223)
+|+++|+++|+|++++-+ ....+++ ++|+++.|++|+++|.. ||+++++ +++.+.+........ .+.++
T Consensus 186 l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~~~g~~---gG~~~~~-~~~~~~l~~~~~~~~~~~~~~ 260 (405)
T 2vi8_A 186 IADEVGAYLMVDMAHIAGLVAAGLHPNPVP-YAHFVTTTTHKTLRGPR---GGMILCQ-EQFAKQIDKAIFPGIQGGPLM 260 (405)
T ss_dssp HHHHHTCEEEEECTTTHHHHHTTSSCCSTT-TCSEEEEESSSTTCCCS---CEEEEEC-HHHHHHHHHHHTTTTCSSCCH
T ss_pred HHHHcCCEEEEEccccccccccCcCCCccc-cCCEEEEeccccCCCCC---CeEEEEc-HHHHHHHHhhhcccccCCCCH
Confidence 478999999999998621 1111222 68999999999998542 4878765 566666654432221 12344
Q ss_pred HhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC----C
Q 027424 75 FDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG----S 145 (223)
Q Consensus 75 ~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~----~ 145 (223)
.....+..+++. +....++..+++..+.+.|++. ++ ++..| .+.+.++.+.+. +
T Consensus 261 ~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~---------------~~~~~~~~~~~~~~~~~ 323 (405)
T 2vi8_A 261 HVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GF-TLVSG---------------GTDNHLLLVDLRPQQLT 323 (405)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TC-EEGGG---------------SCSSSEEEEECGGGTCC
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CC-eEecC---------------CCCceEEEEEccCCCCC
Confidence 333333344443 3455677788888899999887 44 34333 123567777763 2
Q ss_pred HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC--------CCHHHHHHHHHHH
Q 027424 146 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------EDVNDLISDLDKA 217 (223)
Q Consensus 146 ~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl--------Ed~~dL~~dl~~A 217 (223)
.....+.+..-++. +.-|.. |. |.. . ...++.+|+|++. |+.+.+++-|+++
T Consensus 324 ~~~~~~~l~~~gi~---v~~g~~------~~---~~~-~-------~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~ 383 (405)
T 2vi8_A 324 GKTAEKVLDEVGIT---VNKNTI------PY---DPE-S-------PFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLV 383 (405)
T ss_dssp HHHHHHHHHHHTEE---CEEECC------TT---CSS-C-------TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCce---eccCcC------cc---ccC-C-------CCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHH
Confidence 33333333333332 121211 10 000 0 0124569999994 6788999999998
Q ss_pred HhcC
Q 027424 218 LRTG 221 (223)
Q Consensus 218 l~~~ 221 (223)
++..
T Consensus 384 ~~~~ 387 (405)
T 2vi8_A 384 LKNV 387 (405)
T ss_dssp HTCT
T ss_pred Hhcc
Confidence 8764
No 97
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.85 E-value=3.9e-08 Score=87.92 Aligned_cols=175 Identities=12% Similarity=0.122 Sum_probs=104.4
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-c---CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-E---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-~---~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|+++|+|++++.... ..++ . .+.++++.|++|.++ .+..+ |+++++ +++.+.+.........+.
T Consensus 216 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~-G~~~~~-~~~~~~l~~~~~~~~~~~ 292 (425)
T 1vp4_A 216 IAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRI-GMVAGS-KEFIRKIVQAKQSADLCS 292 (425)
T ss_dssp HHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCE-EEEECC-HHHHHHHHHHHHHHHSSC
T ss_pred HHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccce-EEEeeC-HHHHHHHHHHhhhhcCCC
Confidence 37889999999999865321 1122 1 256799999999998 55444 556555 567676665544333345
Q ss_pred ChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcC-C---CeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 73 APFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASH-P---RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 73 sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~-p---~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
++...+.+...|+.. ..+.++..++...+.+.|+++ | .+ ++..| ..|.++.++
T Consensus 293 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~-~~~~~----------------~~g~~~~~~ 355 (425)
T 1vp4_A 293 PAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGV-KWVKS----------------EGGLFIWLT 355 (425)
T ss_dssp CHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTC-EECCC----------------SBSSEEEEE
T ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCce-EEecC----------------CccEEEEEE
Confidence 777777777777652 233455667888888888874 5 23 33323 134566677
Q ss_pred eCC----HHHHHHHHhhcCcce-eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHH
Q 027424 143 TGS----LALSKHVVETTKYFS-ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDL 214 (223)
Q Consensus 143 ~~~----~~~~~~f~~~l~l~~-~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---Ed~~dL~~dl 214 (223)
+.. .+..+++.++ ++.- .+..++.. +-.++.+|||++. |+.+.+++.|
T Consensus 356 ~~~~~~~~~l~~~l~~~-gi~v~~g~~f~~~-----------------------~~~~~~iRis~~~~~~e~i~~~l~~l 411 (425)
T 1vp4_A 356 LPEGFDTWEMFEYAKRK-KVFYVPGRVFKVY-----------------------DEPSPSMRLSFCLPPDEKIVEGIKRL 411 (425)
T ss_dssp CCTTCCTTTTHHHHHHH-TEECEEGGGGCTT-----------------------CCCCSEEEEECSSSCHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHC-CCEEECchhhcCC-----------------------CCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 631 2223444444 4331 11111100 0135789999997 4566677777
Q ss_pred HHHHh
Q 027424 215 DKALR 219 (223)
Q Consensus 215 ~~Al~ 219 (223)
+++++
T Consensus 412 ~~~l~ 416 (425)
T 1vp4_A 412 REVVL 416 (425)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
No 98
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=98.85 E-value=3e-07 Score=80.70 Aligned_cols=106 Identities=12% Similarity=0.079 Sum_probs=75.0
Q ss_pred CccccCCEEEEecCCCCCCCc--Ccc-----------cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh
Q 027424 1 MAHAHGALLLVDNSIMSPVLS--RPL-----------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~--~pl-----------~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~ 67 (223)
+|+++|+++|+|++++..... .|+ ..+.++++.|++|.++..+..+|. ++. ++++.+.+......
T Consensus 196 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-~~~-~~~~~~~~~~~~~~ 273 (396)
T 3jtx_A 196 LQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGF-VAG-DAELLKNFLLYRTY 273 (396)
T ss_dssp HHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEE-EEE-CHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEE-EEe-CHHHHHHHHHHHhh
Confidence 378899999999998643221 122 257889999999988777766654 544 56677777766665
Q ss_pred cCCCCChHhHHHHHhcHH---HHHHHHHHHHhHHHHHHHHHhcC
Q 027424 68 EGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 68 ~g~~~sp~da~ll~~~l~---tl~~R~~~~~~na~~la~~L~~~ 108 (223)
.+.+.++...+.+...++ .+..+.++..++...+.+.|+++
T Consensus 274 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 317 (396)
T 3jtx_A 274 HGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQV 317 (396)
T ss_dssp HTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 566677776666666664 34555677778888888899876
No 99
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=98.85 E-value=4e-09 Score=95.55 Aligned_cols=176 Identities=13% Similarity=0.084 Sum_probs=101.7
Q ss_pred CccccCCEEEEecCCCCCCCc-CcccCCCcEEEeccccccc-CCcccceeEEEecChhHHHHHHH-------------H-
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA-GHSDVMAGVLAVKGERLAKELYF-------------L- 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~pl~~GADivv~S~tK~l~-G~~d~~~G~v~~~~~~~~~~l~~-------------~- 64 (223)
+||++|+++++|++++.+... +.-++|+|+++.|.+|+++ |+. .+|+ +.+++ ++.+.+.. .
T Consensus 239 la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~gp~-~~g~-l~~~~-~~~~~~~~~~~g~~~~~~~~~~~ 315 (465)
T 3e9k_A 239 AGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAG-GIAG-AFIHE-KHAHTIKPALVGWFGHELSTRFK 315 (465)
T ss_dssp HHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSSTTCCCTT-CCCE-EEECG-GGTTTSCCSSCCGGGBCHHHHTT
T ss_pred HHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEECcccccccCCC-ceEE-EEEcH-HHHhhcCCcccCccCCCCCcccc
Confidence 479999999999999876532 2224689999999999995 443 3444 44554 33222110 0
Q ss_pred -----------HHhcCCCCChHhHHHHHhcHHHHH-----HHHHHHHhHHHHHHHHHhcC----------CCeeEEEcCC
Q 027424 65 -----------QNAEGSGLAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASH----------PRVKKVNYAG 118 (223)
Q Consensus 65 -----------~~~~g~~~sp~da~ll~~~l~tl~-----~R~~~~~~na~~la~~L~~~----------p~v~~V~yP~ 118 (223)
......+.++.....+..+++.+. ...++..+++..+.+.|++. |.+ ++..|.
T Consensus 316 ~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~-~~~~p~ 394 (465)
T 3e9k_A 316 MDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVV-NIITPS 394 (465)
T ss_dssp CCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CE-EECSCS
T ss_pred cCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCe-EEeCCC
Confidence 000011445555666666766643 23355566666677777764 444 444441
Q ss_pred CCCCcchHHHHhhhCCCCeeEEEEeC-CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCe
Q 027424 119 LPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDL 197 (223)
Q Consensus 119 l~~~~~~~~~~~~~~g~ggl~sf~~~-~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~l 197 (223)
- ....|++++|.+. +.....+.+..-+++. .+ -.++.
T Consensus 395 ~------------~~~~g~~~~~~~~~~~~~l~~~L~~~Gi~v---~~---------------------------~~~~~ 432 (465)
T 3e9k_A 395 H------------VEERGCQLTITFSVPNKDVFQELEKRGVVC---DK---------------------------RNPNG 432 (465)
T ss_dssp S------------GGGBCSCEEEEECCTTCCHHHHHHTTTEEC---EE---------------------------ETTTE
T ss_pred C------------HhhcccEEEEEecCCHHHHHHHHHHCCEEE---ec---------------------------CCCCE
Confidence 1 1225889999884 2222223333333331 10 03578
Q ss_pred EEEEe-----cCCCHHHHHHHHHHHHhcCC
Q 027424 198 VRISV-----GIEDVNDLISDLDKALRTGP 222 (223)
Q Consensus 198 iRlsv-----GlEd~~dL~~dl~~Al~~~~ 222 (223)
||+|+ ..||++++++.|+++++..+
T Consensus 433 iRis~~~~~~t~edi~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 433 IRVAPVPLYNSFHDVYKFTNLLTSILDSAE 462 (465)
T ss_dssp EEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred EEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence 99998 46778889999999987653
No 100
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.84 E-value=4.1e-08 Score=84.48 Aligned_cols=176 Identities=12% Similarity=-0.013 Sum_probs=98.2
Q ss_pred Ccccc--CCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHH---------HHH----H
Q 027424 1 MAHAH--GALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE---------LYF----L 64 (223)
Q Consensus 1 ia~~~--g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~---------l~~----~ 64 (223)
+|+++ |+++++|++++.+.. ...-++|+|+++.|++|++.|... .|++++++ ++.++ +.. .
T Consensus 146 l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 222 (352)
T 1iug_A 146 AFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPG--LGFVALSP-RALERLKPRGYYLDLARELKAQ 222 (352)
T ss_dssp HHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSC--EEEEEECH-HHHHTCCCCSSTTCHHHHHHHH
T ss_pred HHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCc--eeEEEECH-HHHHHhhCCCceeeHHHHHhhc
Confidence 47888 999999999863321 122235799999999997776532 36666654 33332 221 1
Q ss_pred H-HhcCCCCChHhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeE
Q 027424 65 Q-NAEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 139 (223)
Q Consensus 65 ~-~~~g~~~sp~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~ 139 (223)
. .....+.++.....+...++.+ ..+.++..+++..+.+.|++. ++ ++..|. ..++++
T Consensus 223 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~---------------~~~~~~ 285 (352)
T 1iug_A 223 KEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GL-RPVPKR---------------FSPAVA 285 (352)
T ss_dssp TTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TC-EESCSS---------------BCTTCE
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CC-cccccc---------------cCCeEE
Confidence 0 1122234444444445555543 345677788888999999886 44 343221 146788
Q ss_pred EEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHH
Q 027424 140 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLD 215 (223)
Q Consensus 140 sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~ 215 (223)
.|.+.+.....+|.+.|.--.+.+.-|. .+ ..++.+|||++. |+.+.+++.|+
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~gi~v~~~~------~~-----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~ 342 (352)
T 1iug_A 286 AFYLPEGVPYARVKEAFAQRGAVIAGGQ------GP-----------------LKGKVFRLSLMGAYDRYEALGVAGMFR 342 (352)
T ss_dssp EEECCTTCCHHHHHHHHHTTTEECEECC------GG-----------------GTTTEEEECCCSSCCHHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHCCEEEEeCC------Cc-----------------cCCCEEEEEccccCCHHHHHHHHHHHH
Confidence 8887411112334433321112222221 00 035789999995 45566666666
Q ss_pred HHHh
Q 027424 216 KALR 219 (223)
Q Consensus 216 ~Al~ 219 (223)
++++
T Consensus 343 ~~~~ 346 (352)
T 1iug_A 343 EVLE 346 (352)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 101
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=98.84 E-value=1.5e-08 Score=89.54 Aligned_cols=175 Identities=15% Similarity=0.160 Sum_probs=101.9
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccCCCc------EEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLELGAD------IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~GAD------ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g 69 (223)
+|+++|+++|+|++++.... .....++.| +++.|++|+++ .+..+ |+++++ +++.+.+........
T Consensus 191 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~-G~~~~~-~~~~~~l~~~~~~~~ 267 (397)
T 2zyj_A 191 MVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRV-AFAVAH-PEALQKLVQAKQGAD 267 (397)
T ss_dssp HHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCC-EEEECC-HHHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-cccee-EEEecC-HHHHHHHHHHHHhhc
Confidence 37889999999999865322 112234444 89999999998 55444 556554 567676665443332
Q ss_pred CCCChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcC-C-CeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 70 SGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASH-P-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~-p-~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
.+.++...+.+...|+. +..+.++..++...+.+.|+++ | .+ ++..| ..|.++.++
T Consensus 268 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~-~~~~~----------------~~g~~~~~~ 330 (397)
T 2zyj_A 268 LHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEV-RYTRP----------------KGGMFVWME 330 (397)
T ss_dssp SSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTS-EECCC----------------SBSSEEEEE
T ss_pred CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCe-EEccC----------------CccEEEEEE
Confidence 23467666655555543 3344466677888888999874 5 34 33333 134566677
Q ss_pred eC---CHH-HHHHHHhhcCcce-eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC---CHHHHHHHH
Q 027424 143 TG---SLA-LSKHVVETTKYFS-ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE---DVNDLISDL 214 (223)
Q Consensus 143 ~~---~~~-~~~~f~~~l~l~~-~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE---d~~dL~~dl 214 (223)
+. +.. ..+++.++ ++.- .+..++.. +..++.+|||++.. +.+.+++-|
T Consensus 331 ~~~~~~~~~~~~~l~~~-gi~v~~g~~f~~~-----------------------~~~~~~iRis~~~~~~~~i~~~~~~l 386 (397)
T 2zyj_A 331 LPKGLSAEGLFRRALEE-NVAFVPGGPFFAN-----------------------GGGENTLRLSYATLDREGIAEGVRRL 386 (397)
T ss_dssp CSTTCCHHHHHHHHHHT-TEEEEESGGGCTT-----------------------SCCTTEEEEECSSSCHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHC-CCEEechHHhcCC-----------------------CCCCCeEEEEcCCCCHHHHHHHHHHH
Confidence 73 222 23333333 4331 11111100 01357899999974 456667777
Q ss_pred HHHHh
Q 027424 215 DKALR 219 (223)
Q Consensus 215 ~~Al~ 219 (223)
+++++
T Consensus 387 ~~~l~ 391 (397)
T 2zyj_A 387 GRALK 391 (397)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
No 102
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=98.84 E-value=2.7e-08 Score=88.66 Aligned_cols=106 Identities=18% Similarity=0.033 Sum_probs=70.4
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcc--cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl--~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++.... ...+ ..+.|+++.|++|.++..+..+| +++++ +++.+.+.........+
T Consensus 210 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G-~~~~~-~~~~~~l~~~~~~~~~~ 287 (429)
T 1yiz_A 210 LCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIG-WAYGP-EALLKNLQMVHQNCVYT 287 (429)
T ss_dssp HHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCE-EEESC-HHHHHHHHHHHHTTTCC
T ss_pred HHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceE-EEEeC-HHHHHHHHHHHhhcccC
Confidence 47899999999999864211 1122 35789999999999987776664 45554 56767666554433344
Q ss_pred CChHhHHHHHhcHHH-----------HHHHHHHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVKT-----------MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~t-----------l~~R~~~~~~na~~la~~L~~~ 108 (223)
.++.....+...|+. +....++..++...+.+.|+++
T Consensus 288 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (429)
T 1yiz_A 288 CATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 335 (429)
T ss_dssp CCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 566655566666665 2233355667777888888876
No 103
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=98.84 E-value=3.2e-08 Score=87.05 Aligned_cols=108 Identities=16% Similarity=0.063 Sum_probs=74.0
Q ss_pred CccccCCEEEEecCCCCCC----CcCcccC-CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 1 MAHAHGALLLVDNSIMSPV----LSRPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~----~~~pl~~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
+|+++|+++|+|++++... ....+.+ +.++++.|++|.++..+..+| +++. ++++.+.+.........+.++.
T Consensus 189 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (391)
T 3h14_A 189 AAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVG-WMVV-PEDQVRVVERIAQNMFICAPHA 266 (391)
T ss_dssp HHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCE-EEEC-CGGGHHHHHHHHHHTTCCCCHH
T ss_pred HHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeE-EEEe-CHHHHHHHHHHHhhhccCCCHH
Confidence 3789999999999986422 1222333 456999999999975666654 4544 4567777766665555566776
Q ss_pred hHHHHHh---cHHHHHHHHHHHHhHHHHHHHHHhcCCC
Q 027424 76 DCWICLR---GVKTMALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 76 da~ll~~---~l~tl~~R~~~~~~na~~la~~L~~~p~ 110 (223)
..+.+.. ..+.+..+.++..++...+.+.|++++.
T Consensus 267 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 304 (391)
T 3h14_A 267 SQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGF 304 (391)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5544433 3445666778888899999999998754
No 104
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=98.83 E-value=8.9e-08 Score=83.69 Aligned_cols=106 Identities=13% Similarity=0.039 Sum_probs=69.8
Q ss_pred ccccCCEEEEecCCCCCCC-cCccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHh
Q 027424 2 AHAHGALLLVDNSIMSPVL-SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 76 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~-~~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~d 76 (223)
|+ +|+++|+|++++.... ..... .+.++++.|++|.++..+..+|. +++ ++++.+.+......+ +.++..
T Consensus 175 ~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~-~~~-~~~~~~~l~~~~~~~--~~~~~~ 249 (356)
T 1fg7_A 175 TR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGF-TLA-NEEVINLLMKVIAPY--PLSTPV 249 (356)
T ss_dssp HT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEE-EEE-CHHHHHHHHHHSCSS--CSCHHH
T ss_pred CC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEE-EEe-CHHHHHHHHHhcCCC--CCCHHH
Confidence 45 8999999999853321 11111 35789999999999766666654 545 456666665443322 456665
Q ss_pred HHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCee
Q 027424 77 CWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVK 112 (223)
Q Consensus 77 a~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~ 112 (223)
.+.....++. +..+.++..++...+.+.|+++|.+.
T Consensus 250 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 290 (356)
T 1fg7_A 250 ADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVE 290 (356)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 5555555543 44455777788889999999988653
No 105
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.83 E-value=7.9e-09 Score=91.00 Aligned_cols=167 Identities=14% Similarity=0.186 Sum_probs=97.5
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|++++.. +.........|++ |++|.++| +..-+|+++++ +++.+.+.........+.+|
T Consensus 211 l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--~~SK~l~g-G~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~ 286 (392)
T 3ruy_A 211 VCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMY--ILGKALGG-GVFPISCAAAN-RDILGVFEPGSHGSTFGGNP 286 (392)
T ss_dssp HHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TTSCCEEEEEC-HHHHTTCCTTSSCCSSTTCH
T ss_pred HHHHcCCEEEEeechhCCCccccchhhhccCCCCCEE--EEchhhhC-ChhhhEEEEEC-HHHHhhhccCCcCCCCCCCH
Confidence 478999999999998421 1112223356887 45699997 42335666654 45544443222222345677
Q ss_pred HhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhcC--CCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHH
Q 027424 75 FDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH--PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK 150 (223)
Q Consensus 75 ~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~~--p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~ 150 (223)
..+..+...++.+. ...++..+++..+.+.|++. |.+..+ .+.|+++.|.+.. ...
T Consensus 287 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~------------------~~~g~~~~~~~~~--~~~ 346 (392)
T 3ruy_A 287 LACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEV------------------RGKGLFIGIELNE--PAR 346 (392)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEE------------------EEETTEEEEEESS--CSH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEE------------------EeeeeEEEEEEcc--hHH
Confidence 77777888887763 33567777888888888875 323211 1257888888843 223
Q ss_pred HHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHH
Q 027424 151 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKAL 218 (223)
Q Consensus 151 ~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~Al 218 (223)
+|.+.+.--.+.++ |. .++.+|+|.+ .|+.+.+++.|+++|
T Consensus 347 ~l~~~l~~~gi~v~----------~~-----------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 347 PYCEQLKAAGLLCK----------ET-----------------HENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp HHHHHHHTTTEECC----------CB-----------------TTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEe----------cC-----------------CCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 33333321111111 11 1578999944 455667777777765
No 106
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=98.83 E-value=3.6e-08 Score=87.08 Aligned_cols=178 Identities=16% Similarity=0.173 Sum_probs=104.1
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-cC---CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-EL---GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-~~---GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|+++|+|++++.... ..++ .+ +.++++.|++|.++ .+.. .|+++++ +++.+.+.......+...
T Consensus 203 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r-~G~~~~~-~~~~~~~~~~~~~~~~~~ 279 (407)
T 2zc0_A 203 IASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFR-IGWIIAE-GEILKKVLMQKQPIDFCA 279 (407)
T ss_dssp HHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSC-CEEEECC-HHHHHHHHHHHTTTTSSS
T ss_pred HHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcc-eEEEecC-HHHHHHHHHHHHhhcCCC
Confidence 47889999999999865322 1112 22 45689999999998 5544 5666554 667777765554444345
Q ss_pred ChHhHHHHHhcHHHH-------HHHHHHHHhHHHHHHHHHhcC-CCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 73 APFDCWICLRGVKTM-------ALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 73 sp~da~ll~~~l~tl-------~~R~~~~~~na~~la~~L~~~-p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
++.....+...++.. ..+.++..++...+.+.|+++ |.+ ++..| ..|.++.|.+.
T Consensus 280 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~ 342 (407)
T 2zc0_A 280 PAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNA-EFTKP----------------IAGMFVMFFLP 342 (407)
T ss_dssp CHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTS-CBCCC----------------SBSSEEEEECS
T ss_pred CHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-EEecC----------------CCcEEEEEEcC
Confidence 676666666656542 223355567778888888874 553 23223 12446667773
Q ss_pred ---CHH-HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHH
Q 027424 145 ---SLA-LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKA 217 (223)
Q Consensus 145 ---~~~-~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---Ed~~dL~~dl~~A 217 (223)
+.. ..+++.++.++. +.-|.... + .+-.++.+|||++. |+.+.+++.|.++
T Consensus 343 ~~~~~~~l~~~l~~~~gi~---v~~g~~~~----~---------------~~~~~~~iRis~~~~~~~~i~~~~~~l~~~ 400 (407)
T 2zc0_A 343 EGADGISFANELMEREGVV---VVPGKPFY----T---------------DESGKNAIRLNFSRPSKEEIPIGIKKLAKL 400 (407)
T ss_dssp TTCCHHHHHHHHHHHTCEE---CBCSGGGC----S---------------SSCCTTEEEEECSSSCTTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCeE---EECchhcc----C---------------CCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 222 223333332332 11121100 0 00135789999996 5678888888888
Q ss_pred Hhc
Q 027424 218 LRT 220 (223)
Q Consensus 218 l~~ 220 (223)
++.
T Consensus 401 l~~ 403 (407)
T 2zc0_A 401 YKE 403 (407)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 107
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=98.82 E-value=1.5e-07 Score=83.50 Aligned_cols=113 Identities=11% Similarity=0.008 Sum_probs=76.3
Q ss_pred CccccCCEEEEecCCCCCCC----cCc-cc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRP-LE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~p-l~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++.... ..+ .. .+.++++.|++|.++..+..+|. ++. ++++.+.+.........+
T Consensus 202 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~-~~~-~~~~~~~~~~~~~~~~~~ 279 (422)
T 3fvs_A 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGW-VLG-PDHIMKHLRTVHQNSVFH 279 (422)
T ss_dssp HHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEE-EEC-CHHHHHHHHHHHHTTTCC
T ss_pred HHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEE-EEe-CHHHHHHHHHHHhhccCC
Confidence 37889999999999864211 111 11 24559999999999766666654 544 456667666555544445
Q ss_pred CChHhHHHHHhcHHH-----------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 72 LAPFDCWICLRGVKT-----------MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 72 ~sp~da~ll~~~l~t-----------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
.++...+.+...++. +..+.++..++...+.+.|+++ .+ ++..|
T Consensus 280 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~ 334 (422)
T 3fvs_A 280 CPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GL-KPIIP 334 (422)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TC-EEEBC
T ss_pred CCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CC-eecCC
Confidence 677777777777764 3455577788889999999988 44 45555
No 108
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=98.82 E-value=3.5e-08 Score=86.58 Aligned_cols=105 Identities=15% Similarity=0.085 Sum_probs=68.0
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH----H----------
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----Q---------- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~----~---------- 65 (223)
+|+++|+++|+|++++.+.. ...-..++|+++.|++|+++|.+ .+ |++++++ ++.++++.. .
T Consensus 184 l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~-~~-G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 260 (393)
T 1vjo_A 184 LCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSP-GA-SPFTMSS-RAIEKLQRRRTKVANWYLDMNLLG 260 (393)
T ss_dssp HHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCS-SC-EEEEECH-HHHHHHHTCSSCCSCSTTCHHHHH
T ss_pred HHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCC-ce-EEEEECH-HHHHHHhccCCCCCceecCcHhhh
Confidence 47889999999999873211 11123578999999999998876 33 6666654 455544211 0
Q ss_pred ------HhcCCCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcC
Q 027424 66 ------NAEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 66 ------~~~g~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~ 108 (223)
...+.+.++...+.+...++.+ ....++..+++..+.+.|++.
T Consensus 261 ~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 314 (393)
T 1vjo_A 261 KYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI 314 (393)
T ss_dssp HHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc
Confidence 0011145666566666677664 334577788888999999876
No 109
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.82 E-value=1.1e-08 Score=90.22 Aligned_cols=106 Identities=15% Similarity=0.168 Sum_probs=69.9
Q ss_pred CccccCCEEEEecCCCCCCCc----Cccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|+++|+|++++..... .... .+.|+++.|++|+++..+..+ |++++ ++++.+.+...........
T Consensus 202 ~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~l~~-~~~~~~~l~~~~~~~~~~~ 279 (389)
T 1o4s_A 202 LAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRV-GYLIS-SEKVATAVSKIQSHTTSCI 279 (389)
T ss_dssp HHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCC-EEEEC-CHHHHHHHHHHHHHHTCSC
T ss_pred HHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccce-EEEEe-CHHHHHHHHHHhhhcccCC
Confidence 378899999999998654321 1122 378999999999997566444 55655 4567676665554433445
Q ss_pred ChHhHHHHHhcHHH-HHHHHHHHHhHHHHHHHHHhcC
Q 027424 73 APFDCWICLRGVKT-MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp~da~ll~~~l~t-l~~R~~~~~~na~~la~~L~~~ 108 (223)
++...+.+...|+. +....++..++...+.+.|++.
T Consensus 280 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (389)
T 1o4s_A 280 NTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKM 316 (389)
T ss_dssp CHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc
Confidence 66555555444433 3344566777888888889876
No 110
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.81 E-value=3.4e-08 Score=86.84 Aligned_cols=109 Identities=15% Similarity=0.150 Sum_probs=70.3
Q ss_pred CccccCCEEEEecCCCCCCC----cCc-ccC--CC-cEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-hcC-C
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRP-LEL--GA-DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEG-S 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~p-l~~--GA-Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-~~g-~ 70 (223)
+|+++|+++|+|++++.... ..+ ..+ +. |+ +.|++|.++..+..+ |+++++++++.+.+..... ... .
T Consensus 190 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~ 267 (390)
T 1d2f_A 190 LCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTG-AYGIIENSSSRDAYLSALKGRDGLS 267 (390)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCC-EEEEECSHHHHHHHHHHHHTTSCCC
T ss_pred HHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhh-eEEEECCHHHHHHHHHHHhhhcccC
Confidence 37899999999999865321 111 122 22 78 999999997555444 5565665667676665544 223 2
Q ss_pred CCChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhc-CCCe
Q 027424 71 GLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRV 111 (223)
Q Consensus 71 ~~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~-~p~v 111 (223)
+.++...+.+...++. +..+.++..++...+.+.|++ .|.+
T Consensus 268 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 313 (390)
T 1d2f_A 268 SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPEL 313 (390)
T ss_dssp SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 4566665555566653 344456677888888899988 5664
No 111
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=98.81 E-value=6.4e-08 Score=86.60 Aligned_cols=114 Identities=11% Similarity=0.046 Sum_probs=72.3
Q ss_pred CccccCCEEEEecCCCCCC-----CcCccc---CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPV-----LSRPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-----~~~pl~---~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|+++|+|++++... ...... .+-+|++.|++|+++ .+..+|. ++++ +++.+.+.........+.
T Consensus 219 ~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~-~~~~-~~l~~~l~~~~~~~~~~~ 295 (425)
T 2r2n_A 219 LARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGF-LTGP-KPLIERVILHIQVSTLHP 295 (425)
T ss_dssp HHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEE-EEEE-HHHHHHHHHHHHTTTCSS
T ss_pred HHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEE-EecC-HHHHHHHHHHHHHhcCCC
Confidence 3789999999999975211 111112 245699999999997 6666655 5454 467677766555544566
Q ss_pred ChHhHHHHHhcHHHH---------HHHHHHHHhHHHHHHHHHhc-CCCeeEEEcC
Q 027424 73 APFDCWICLRGVKTM---------ALRVEKQQDNAQKIAEFLAS-HPRVKKVNYA 117 (223)
Q Consensus 73 sp~da~ll~~~l~tl---------~~R~~~~~~na~~la~~L~~-~p~v~~V~yP 117 (223)
++...+.+...|+.+ ....++..++...+.+.|++ .|.+..+..|
T Consensus 296 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p 350 (425)
T 2r2n_A 296 STFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVP 350 (425)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCC
T ss_pred CHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCC
Confidence 777666666666542 12224556677778888887 4665445444
No 112
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=98.81 E-value=1.4e-07 Score=83.44 Aligned_cols=174 Identities=13% Similarity=0.087 Sum_probs=98.2
Q ss_pred cccCCEEEEecCCCCCCCcCcccC-CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH----------------
Q 027424 3 HAHGALLLVDNSIMSPVLSRPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---------------- 65 (223)
Q Consensus 3 ~~~g~~lvVDnT~~s~~~~~pl~~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~---------------- 65 (223)
+.+|++++||++++-.. .|+.. ++|+++.|.+|++++.+ . .|+++.+ +++.++++...
T Consensus 189 ~~~~~~vivD~a~~~~~--~~~~~~~~di~~~s~sK~~~~~g-g-~g~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~ 263 (398)
T 2fyf_A 189 GSDDALVVIDATSGAGG--LPVDIAETDAYYFAPQKNFASDG-G-LWLAIMS-PAALSRIEAIAATGRWVPDFLSLPIAV 263 (398)
T ss_dssp TCC-CEEEEECTTTTTT--SCCCGGGCSEEEECTTSTTCSCS-S-EEEEEEC-HHHHHHHHHHHHTTCCCCGGGCHHHHH
T ss_pred hhcCCeEEEEeccccCC--cccCcccCcEEEEecCcccCCCC-c-eEEEEEC-HHHHHHhhcccccCCCCCcEEehHHHh
Confidence 33799999999986443 23322 58999999999999774 2 3556555 45555553211
Q ss_pred H-----hcCCCCChHhHHHHHhcHHH------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCC
Q 027424 66 N-----AEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 134 (223)
Q Consensus 66 ~-----~~g~~~sp~da~ll~~~l~t------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g 134 (223)
. ..-.+.+....+.+..+++. +..+.++..+++..+.+.|++.|.+ ++..|. |+. .
T Consensus 264 ~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~----~~~--------~ 330 (398)
T 2fyf_A 264 ENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYT-TPFVTD----PGL--------R 330 (398)
T ss_dssp HHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTE-EESCCS----GGG--------B
T ss_pred hhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCc-eeccCC----hhh--------c
Confidence 0 01112333334445555554 3445677788889999999988765 333211 110 1
Q ss_pred CCeeEEEEeCCHHHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCH
Q 027424 135 AGSVLSFLTGSLALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDV 207 (223)
Q Consensus 135 ~ggl~sf~~~~~~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~ 207 (223)
.+.+++|.+.......+|.+.| ++. +.-| +.. ..++.+|||+|. ||.
T Consensus 331 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~---v~~g-------------~~~----------~~~~~iRis~~~~~t~e~i 384 (398)
T 2fyf_A 331 SQVVGTIDFVDDVDAGTVAKILRANGIV---DTEP-------------YRK----------LGRNQLRVAMFPAVEPDDV 384 (398)
T ss_dssp CSSEEEEEECTTSCHHHHHHHHHHTTCB---CCSC-------------CTT----------TCSSEEEEECCTTSCHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHCCcE---EecC-------------ccc----------CCCCEEEEEecCCCCHHHH
Confidence 2348888883111122233322 333 1111 100 125789999994 567
Q ss_pred HHHHHHHHHHHhc
Q 027424 208 NDLISDLDKALRT 220 (223)
Q Consensus 208 ~dL~~dl~~Al~~ 220 (223)
+.+++.|++++++
T Consensus 385 ~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 385 SALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 7777888777754
No 113
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=98.80 E-value=6.3e-08 Score=83.06 Aligned_cols=169 Identities=16% Similarity=0.133 Sum_probs=98.5
Q ss_pred CccccCCEEEEecCCCCCCCc--Cccc-CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS--RPLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 77 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~--~pl~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da 77 (223)
+|+++++ +|+|++++..... .++. .+.++++.|+||+++..+..+| +++. ++++.+.+...... .+.++...
T Consensus 160 l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G-~~~~-~~~~~~~l~~~~~~--~~~~~~~~ 234 (337)
T 3p1t_A 160 LRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLG-ALFG-PSELIAAMKRKQWF--CNVGTLDL 234 (337)
T ss_dssp HHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCE-EEEC-CHHHHHHHHTTSCT--TCSCHHHH
T ss_pred HHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcchheE-EEEe-CHHHHHHHHhhcCC--CCCCHHHH
Confidence 3567776 6779998632211 1222 3568999999999975665554 5544 45666655432221 23444433
Q ss_pred HHHH---hcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHh
Q 027424 78 WICL---RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 154 (223)
Q Consensus 78 ~ll~---~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~ 154 (223)
..+. +..+.+..++++..++...+.+.|+++ .+ ++ +| ..|+.+.+...+.+...+.+.
T Consensus 235 ~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~-~~----------------~~~~~~~~~~~~~~~~~~~l~ 295 (337)
T 3p1t_A 235 HALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GY-RV-AS----------------SEANFVLVENAAGERTLRFLR 295 (337)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TC-CB-CC----------------CSSSEEEEECTTTHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cC-EE-CC----------------CCCeEEEEEcCCHHHHHHHHH
Confidence 3333 333446677788888889999999987 33 22 22 146777777743334444444
Q ss_pred hcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHh
Q 027424 155 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 219 (223)
Q Consensus 155 ~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-Ed~~dL~~dl~~Al~ 219 (223)
.-++. ++-|.. .| .++.+|||+|- ||.+.|++.|++.++
T Consensus 296 ~~gi~---v~~g~~----------------------~~-~~~~iRis~~~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 296 ERGIQ---VKDAGQ----------------------FG-LHHHIRISIGREEDNDRLLAALAEYSD 335 (337)
T ss_dssp HTTEE---CEEGGG----------------------GT-CCSEEEEECCCHHHHHHHHHHHHHHTC
T ss_pred HCCeE---EEECcc----------------------CC-CCCeEEEecCCHHHHHHHHHHHHHHhh
Confidence 44432 121211 01 14789999996 467777777776654
No 114
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=98.80 E-value=1e-08 Score=91.40 Aligned_cols=191 Identities=19% Similarity=0.190 Sum_probs=102.6
Q ss_pred CEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-------HHhcCCCCChHhHH
Q 027424 7 ALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCW 78 (223)
Q Consensus 7 ~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-------~~~~g~~~sp~da~ 78 (223)
++++||++++.+.. ....+.++|+++.|++|++ |. . .|+++++++.....+... ......+.++...+
T Consensus 216 ~~livDea~~~~~~~~~~~~~~~d~~~~s~~K~~-g~--~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (432)
T 3a9z_A 216 VLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFY-GP--R-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIA 291 (432)
T ss_dssp CEEEEECTTTTTTSCCCHHHHCCSEEEEEGGGTT-CC--S-CEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHH
T ss_pred eEEEEEchhhhCCcccChhhcCCCEEEEehhHhc-CC--c-ceEEEEccccccCCcCceeecCCccccccCCCcCHHHHH
Confidence 99999999865432 1212358999999999987 43 3 677777754311111100 11111234555555
Q ss_pred HHHhcHHHHHHH----HHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC-HHHHHHHH
Q 027424 79 ICLRGVKTMALR----VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVV 153 (223)
Q Consensus 79 ll~~~l~tl~~R----~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~-~~~~~~f~ 153 (223)
.+..+++.+... .++..+++..+.+.|++.+.+ +|.+++-.. + ....+++++|.+.+ ......++
T Consensus 292 a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~ 361 (432)
T 3a9z_A 292 GLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGK-RIHLNSRFP--G-------VERLPNTCNFSIQGSQLRGYMVL 361 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG-GEEESSCCT--T-------CCBCTTEEEEEECSTTCCHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccCC-cEEEeCCCC--c-------ccCCCCEEEEEeCCCCCcHHHHH
Confidence 555666654433 345556666666777665443 344333210 0 12356788898843 11234455
Q ss_pred hhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC----CCeEEEEec----CCCHHHHHHHHHHHHhc
Q 027424 154 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVG----IEDVNDLISDLDKALRT 220 (223)
Q Consensus 154 ~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~----~~liRlsvG----lEd~~dL~~dl~~Al~~ 220 (223)
+.+. .+..+.|...+ +. +...........|+. ++.||||+| .||.+.+++.|++++++
T Consensus 362 ~~l~--~i~~~~G~~~~----~~---~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 362 AQCQ--TLLASVGASCH----SD---HEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp HHCS--SEECBSSCGGG----GG---GTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHhc--CeEEecccccc----CC---CCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 5553 23333342211 10 000011222345654 489999999 46788888888888763
No 115
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=98.80 E-value=9.5e-09 Score=89.40 Aligned_cols=194 Identities=14% Similarity=0.073 Sum_probs=105.2
Q ss_pred CccccC--CEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChh-HHHHHHHH---HHhcCCCCC
Q 027424 1 MAHAHG--ALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYFL---QNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g--~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~-~~~~l~~~---~~~~g~~~s 73 (223)
+|+++| +++|+|++++-+.. .+.-++++|+++.|++|.++.++ .|+++++++. +...+... ......+.+
T Consensus 164 l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (384)
T 1eg5_A 164 IVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKG---VGITYIRKGVPIRPLIHGGGQERGLRSGTQN 240 (384)
T ss_dssp HHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTT---CEEEEECTTSCCCCSBCSSCTTTTTBCSCCC
T ss_pred HHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCc---eEEEEEcCCCccccccccCcccccccCCCCC
Confidence 478899 99999999752211 12123579999999999876544 3777776542 11111000 011122455
Q ss_pred hHhHHHHHhcHHHH----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHH
Q 027424 74 PFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 149 (223)
Q Consensus 74 p~da~ll~~~l~tl----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~ 149 (223)
+...+.+...++.+ ....++..+++..+.+.|++ +.+ ++..|.- .+++.++.|.+.+. ..
T Consensus 241 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~-~~~~~~~-------------~~~~~~~~~~~~~~-~~ 304 (384)
T 1eg5_A 241 VPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN-LGA-HIITPLE-------------ISLPNTLSVSFPNI-RG 304 (384)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT-TTC-EECSCTT-------------SBCTTEEEEECTTC-CH
T ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC-CCe-EEeCCcc-------------cCCCCEEEEEeCCC-CH
Confidence 65555555666653 34457778888899999987 655 4443310 12566788877321 12
Q ss_pred HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC----CCeEEEEec----CCCHHHHHHHHHHHHhcC
Q 027424 150 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVG----IEDVNDLISDLDKALRTG 221 (223)
Q Consensus 150 ~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~----~~liRlsvG----lEd~~dL~~dl~~Al~~~ 221 (223)
..|.+.|.--.+.+.-|...+. .+.... ...+..|++ ++.+|||++ .||.+.+++.|+++++..
T Consensus 305 ~~~~~~l~~~gi~v~~g~~~~~--~~~~~~------~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 305 STLQNLLSGYGIYVSTSSACTS--KDERLR------HVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (384)
T ss_dssp HHHHHHHHHTTEECBC--------------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhCCeEEeccccccC--CCCcch------HHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2333333211222222221110 000000 112344554 478999999 456788888888887643
No 116
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=98.79 E-value=7.1e-08 Score=84.68 Aligned_cols=106 Identities=7% Similarity=-0.033 Sum_probs=71.4
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-----cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-----~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++.... ..++ ..+.|+++.|++|+++..+..+ |+++++ +++.+.+.........+
T Consensus 191 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~-~~~~~~l~~~~~~~~~~ 268 (386)
T 1u08_A 191 AIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKV-GYCVAP-APISAEIRKVHQYLTFS 268 (386)
T ss_dssp HHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCC-EEEECC-HHHHHHHHHHHHHHTSS
T ss_pred HHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccce-EEEEcC-HHHHHHHHHHHHhhccC
Confidence 47899999999999864211 1122 2478999999999998666665 556554 56767666554433334
Q ss_pred CChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~ 108 (223)
.++.....+...|+. +....++..++...+.+.|+++
T Consensus 269 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (386)
T 1u08_A 269 VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNES 309 (386)
T ss_dssp CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSS
T ss_pred CChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 566555556666664 3334466678888888899876
No 117
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=98.79 E-value=5e-08 Score=84.94 Aligned_cols=171 Identities=16% Similarity=0.113 Sum_probs=100.3
Q ss_pred cCCEEEEecCCCCCCCcCcccC-CCcEEEecccccccCCcccceeEEEecChhHHHHHHH------------HHHhcCCC
Q 027424 5 HGALLLVDNSIMSPVLSRPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF------------LQNAEGSG 71 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~~pl~~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~------------~~~~~g~~ 71 (223)
+|++++||++++.+. .|+.+ ..|+++.|+||+++..+ .|+++++++ +.+.+.. .......+
T Consensus 166 ~~~~vivD~a~~~~~--~~~~~~~~d~~~~s~~K~~g~~G---~G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~t 239 (362)
T 2c0r_A 166 GSVPLIGDMSSDILS--RPFDLNQFGLVYAGAQKNLGPSG---VTVVIVRED-LVAESPKHLPTMLRYDTYVKNNSLYNT 239 (362)
T ss_dssp TTSCEEEECTTTTTS--SCCCGGGCSEEEEETTTTTCCSS---CEEEEEEGG-GSSSCCTTSCGGGCHHHHHHTTTCSSC
T ss_pred CCCEEEEEChhhccC--CccchhHCcEEEEeccccccCcC---cEEEEEcHH-HHhhccccCchHHhHHHHhhccCcCCC
Confidence 689999999986543 23322 24999999999997444 466766653 3222211 01112234
Q ss_pred CChHhHHHHHhcHHH------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCC
Q 027424 72 LAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 145 (223)
Q Consensus 72 ~sp~da~ll~~~l~t------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~ 145 (223)
.++...+.+..+++. +..+.++..+++..+.+.|++.+.+..+.-| |.+ . .+++++|.+.+
T Consensus 240 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----~~~-------~-~~~~~~~~~~~ 306 (362)
T 2c0r_A 240 PPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVD-----VDS-------R-SDMNITFRLAS 306 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSC-----GGG-------B-CSSEEEEECSC
T ss_pred chHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCC-----hHH-------c-CCcEEEEEcCC
Confidence 555555556666654 3555678888889999999988633122211 111 1 35678888854
Q ss_pred HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHh
Q 027424 146 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALR 219 (223)
Q Consensus 146 ~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~Al~ 219 (223)
.....+|.+.|.--.+.+. .|. + ..+.||+|+| .||.+.+++.|++.++
T Consensus 307 ~~~~~~~~~~L~~~gi~~~-~g~------~------------------~~~~iRis~~~~~~~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 307 EELEKEFVKASEQEGFVGL-KGH------R------------------SVGGLRASIYNAVPYESCEALVQFMEHFKR 359 (362)
T ss_dssp HHHHHHHHHHHHHTTEESC-BCC------T------------------TTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHCCCeec-cCC------C------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 4445666665532222111 110 0 0245999999 5677778888777665
No 118
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=98.79 E-value=1.7e-07 Score=84.90 Aligned_cols=175 Identities=11% Similarity=0.105 Sum_probs=101.0
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-c---CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-E---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-~---~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|+++|+|++++.... ..++ . .+.++++.|++|.++ .+..+| +++++ +++.+.+.........+.
T Consensus 245 la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG-~v~~~-~~l~~~l~~~~~~~~~~~ 321 (448)
T 3aow_A 245 LASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIG-WMVGD-PGIIRKMEIAKQSTDLCT 321 (448)
T ss_dssp HHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCE-EEEEC-HHHHHHHHHHHHHHHSSC
T ss_pred HHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEE-EEEeC-HHHHHHHHHHHHHhcCCC
Confidence 47899999999999864321 1111 2 256799999999998 665555 45555 567776665443322234
Q ss_pred ChHhHHHHHhcHHH------HHHHHHHHHhHHHHHHHHHhcC-C-CeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 73 APFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASH-P-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 73 sp~da~ll~~~l~t------l~~R~~~~~~na~~la~~L~~~-p-~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
++...+.+...|+. +..+.++..++...+.+.|+++ | .+ ++..| ..|..+.+++.
T Consensus 322 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~-~~~~p----------------~~g~~~~v~~~ 384 (448)
T 3aow_A 322 NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGV-KWTKP----------------EGGMFIWVTLP 384 (448)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC-EECCC----------------SBSSEEEEECS
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCe-EEeCC----------------CccEEEEEEcC
Confidence 66666666555553 2233355557788888888874 5 34 33334 12445566663
Q ss_pred C---H-HHHHHHHhhcCcce-eccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC---CCHHHHHHHHHH
Q 027424 145 S---L-ALSKHVVETTKYFS-ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDK 216 (223)
Q Consensus 145 ~---~-~~~~~f~~~l~l~~-~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---Ed~~dL~~dl~~ 216 (223)
. . +..+++.++ ++.- .+..++.. +-.++.+|||++. |+.++.++.|.+
T Consensus 385 ~~~~~~~l~~~l~~~-gV~v~pg~~f~~~-----------------------~~~~~~iRls~~~~~~e~i~~~~~~L~~ 440 (448)
T 3aow_A 385 DGIDSKKMLERAIKK-GVAYVPGEAFYAH-----------------------RDVKNTMRLNFTYVDEDKIMEGIKRLAE 440 (448)
T ss_dssp TTCCHHHHHHHHHHT-TEECEEGGGGSTT-----------------------CCCCSEEEEECSSSCTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHC-CcEEEcchhhcCC-----------------------CCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 2 2 223333333 3321 11111100 1135789999996 356677777777
Q ss_pred HHh
Q 027424 217 ALR 219 (223)
Q Consensus 217 Al~ 219 (223)
+++
T Consensus 441 ~l~ 443 (448)
T 3aow_A 441 TIK 443 (448)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 119
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=98.79 E-value=2.1e-08 Score=86.03 Aligned_cols=107 Identities=15% Similarity=0.137 Sum_probs=65.5
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHH----------H---HH-
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY----------F---LQ- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~----------~---~~- 65 (223)
+|+++|+++++|++++-+.. ...-.+|+|+++.|++|++.|... .|++++++ ++.++++ . ..
T Consensus 149 l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~ 225 (353)
T 2yrr_A 149 LAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPG--LAPIAASL-EARKAFTGKRGWYLDLARVAEHWE 225 (353)
T ss_dssp HHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSS--CEEEEECH-HHHHHCCCCSCSTTCHHHHHHHHT
T ss_pred HHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCc--eEEEEECH-HHHHHhccCCCccccHHHHhhhhh
Confidence 47899999999999853322 111234789999999998765432 36676654 4444432 0 01
Q ss_pred -HhcCCCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 66 -NAEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 66 -~~~g~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.....+.++.....+..+++.+ ..+.++..+++..+.+.|++. ++
T Consensus 226 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 276 (353)
T 2yrr_A 226 RGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GF 276 (353)
T ss_dssp TCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 1112234554444444555543 344577788888889999876 44
No 120
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=98.78 E-value=5e-07 Score=79.59 Aligned_cols=113 Identities=14% Similarity=-0.016 Sum_probs=76.2
Q ss_pred CccccCCEEEEecCCCCCCC----c-Cccc----CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----S-RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~-~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++.... . .... .+.++++.|++|+++.++..+| +++. ++++.+.+.........+
T Consensus 195 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G-~~~~-~~~~~~~~~~~~~~~~~~ 272 (410)
T 3e2y_A 195 LCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLG-WSIG-PAHLIKHLQTVQQNSFYT 272 (410)
T ss_dssp HHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCE-EEEC-CHHHHHHHHHHHHTTTCC
T ss_pred HHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEE-EEEE-CHHHHHHHHHHHHhhccC
Confidence 47899999999999853211 1 1111 2345999999999986676655 4544 456667666655544555
Q ss_pred CChHhHHHHHhcHHH-----------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 72 LAPFDCWICLRGVKT-----------MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 72 ~sp~da~ll~~~l~t-----------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
.++...+.+...+++ +..+.++..++...+.+.|+++ .+ ++..|
T Consensus 273 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~ 327 (410)
T 3e2y_A 273 CATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GL-KPIVP 327 (410)
T ss_dssp CCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TC-EEEBC
T ss_pred CChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CC-eecCC
Confidence 677777777777763 3455577788889999999988 44 45555
No 121
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=98.77 E-value=4.1e-08 Score=89.24 Aligned_cols=103 Identities=15% Similarity=0.155 Sum_probs=61.8
Q ss_pred CccccCCEEEEecCCCCCC-----CcCcccCCCcEEEecccccccCCcccceeEEEecChhHH-HHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-----~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~-~~l~~~~~~~g~~~sp 74 (223)
+||++|++++||++++..+ ...++.+|+|+++.|+||++.|. ..+|+++++++.+. ..+......... .+|
T Consensus 170 l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~~S~~K~l~~~--~g~g~l~~~~~~i~~~~~~~~~~~~~~-~s~ 246 (446)
T 2x3l_A 170 SLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFHKTLPAL--TMGSVLYIHKNAPYRENIIEYLSYFQT-SSP 246 (446)
T ss_dssp HHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEEECHHHHSSSC--TTCEEEEEETTCTTHHHHHHHHHHHSC-SSC
T ss_pred HHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEEECCccccccc--cccEEEEEcCCcCCHHHHHHHHHHHcC-CCc
Confidence 4789999999999997633 23456679999999999988754 34687877765332 233322222221 233
Q ss_pred HhHHHHHhcHHH----HHHH-HHHHHhHHHHHHHHHhcC
Q 027424 75 FDCWICLRGVKT----MALR-VEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 75 ~da~ll~~~l~t----l~~R-~~~~~~na~~la~~L~~~ 108 (223)
.+..+.+++. +... .++..++..++++++++.
T Consensus 247 --~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~ 283 (446)
T 2x3l_A 247 --SYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK 283 (446)
T ss_dssp --CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc
Confidence 2333333333 2221 122556666777777665
No 122
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.76 E-value=5e-08 Score=86.13 Aligned_cols=179 Identities=16% Similarity=0.159 Sum_probs=104.7
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC-CCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g-~~~sp 74 (223)
+|+++|+++|+|+++..+.. ..++. ++|+++.|++|+++|.. +|+++++++++.+.+........ .+.++
T Consensus 187 l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~g~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (417)
T 3n0l_A 187 IADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTLRGPR---GGIIMTNDEELAKKINSAIFPGIQGGPLM 262 (417)
T ss_dssp HHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTTCSCS---CEEEEESCHHHHHHHHHHHTTTTCSSCCH
T ss_pred HHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCccccCCCC---eeEEEECCHHHHHHHhhhhCCcccCCcHH
Confidence 47899999999999643321 33444 68999999999998753 68887776677766654432211 12223
Q ss_pred HhHHHHHhcH-----HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC----C
Q 027424 75 FDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG----S 145 (223)
Q Consensus 75 ~da~ll~~~l-----~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~----~ 145 (223)
.....+...+ +.+..+.++..+++..+.+.|++ +.+ .+..++ ..+.++.+.+. +
T Consensus 263 ~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~-~~~~~~---------------~~~~~~~~~~~~~~~~ 325 (417)
T 3n0l_A 263 HVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKF-KLVSDG---------------TDNHLVLMSFLDREFS 325 (417)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTC-EEGGGS---------------CSSSEEEEECTTSSSC
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCc-eeccCC---------------CCceEEEEEcccCCCC
Confidence 2222222222 23456678888899999999988 443 222111 13445556552 3
Q ss_pred HHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec--------CCCHHHHHHHHHHH
Q 027424 146 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLISDLDKA 217 (223)
Q Consensus 146 ~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--------lEd~~dL~~dl~~A 217 (223)
.+.+.+++..-++.-.. +.. |.... ....+.-+|++.. -|+.+.+++.|+++
T Consensus 326 ~~~~~~~l~~~gi~v~~---~~~------~~~~~-----------~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~ 385 (417)
T 3n0l_A 326 GKDADLALGNAGITANK---NTV------PGEIR-----------SPFITSGLRLGTPALTARGFKEKEMEIVSNYIADI 385 (417)
T ss_dssp HHHHHHHHHHTTEECEE---CCC------TTCCS-----------CTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCeEEec---ccc------CCCCc-----------ccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHH
Confidence 45556666655544211 111 11000 0012355898865 37788899999988
Q ss_pred Hhc
Q 027424 218 LRT 220 (223)
Q Consensus 218 l~~ 220 (223)
|+.
T Consensus 386 l~~ 388 (417)
T 3n0l_A 386 LDD 388 (417)
T ss_dssp HHT
T ss_pred Hhc
Confidence 864
No 123
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=98.75 E-value=5.3e-08 Score=86.88 Aligned_cols=105 Identities=8% Similarity=-0.019 Sum_probs=66.2
Q ss_pred CccccCCEEEEecCCCCCCC----c-C--cccCC-------Cc--EEEecccccccCCcccceeEEEecChhHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL----S-R--PLELG-------AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~-~--pl~~G-------AD--ivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~ 64 (223)
+|+++|++||+|++++...+ + . .+..+ +| +++.|+||.++..+..+|. +++.++++.+.+...
T Consensus 216 ~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~-~~~~~~~~~~~~~~~ 294 (428)
T 1iay_A 216 FTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGI-IYSFNDDVVNCARKM 294 (428)
T ss_dssp HHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEE-EEESCHHHHHHHHHH
T ss_pred HHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEE-EEeCCHHHHHHHHHH
Confidence 37899999999999864221 1 1 12112 78 8999999999766766654 556556676666544
Q ss_pred HHhcCCCCChHhHHHHHhcHHH-------HHHHHHHHHhHHHHHHHHHhcC
Q 027424 65 QNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 65 ~~~~g~~~sp~da~ll~~~l~t-------l~~R~~~~~~na~~la~~L~~~ 108 (223)
.... ..++.....+...++. +....++..++...+.+.|++.
T Consensus 295 ~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (428)
T 1iay_A 295 SSFG--LVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV 343 (428)
T ss_dssp HTTS--CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred Hhcc--cCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3322 3455544444444433 2233456677888888889887
No 124
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=98.75 E-value=1.5e-07 Score=82.97 Aligned_cols=132 Identities=16% Similarity=0.130 Sum_probs=80.9
Q ss_pred CccccCCEEEEecCCCCCCC-cC---cc---c--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH--hcC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SR---PL---E--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~---pl---~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~--~~g 69 (223)
+|+++|+++|+|++++.+.+ .. .+ . ...|+++.|++|.++++ ||+++.+ +++.+.+..... ...
T Consensus 203 l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~----GG~~~~~-~~~~~~l~~~~~~~~~~ 277 (401)
T 2bwn_A 203 IAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVF----GGYIAAS-ARMVDAVRSYAPGFIFS 277 (401)
T ss_dssp HHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSC----CEEEEEC-HHHHHHHHHHCHHHHTS
T ss_pred HHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCC----CCEEecC-HHHHHHHHHhCcCceec
Confidence 47899999999999874322 11 11 1 13689999999999965 3777664 566555543211 223
Q ss_pred CCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 70 SGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
..++|.....+..+++.+ ..+.++..+++..+.+.|++. .+ ++..| .|++++|.+.
T Consensus 278 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~-----------------~~~~~~~~~~ 338 (401)
T 2bwn_A 278 TSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GM-PIIDH-----------------GSHIVPVVIG 338 (401)
T ss_dssp BCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TC-CBCCC-----------------SSSCEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CC-cccCC-----------------CCCeEEEEeC
Confidence 334565555556666654 344577778888888888875 33 22111 2468899886
Q ss_pred CHHHHHHHHhhc
Q 027424 145 SLALSKHVVETT 156 (223)
Q Consensus 145 ~~~~~~~f~~~l 156 (223)
+.....+|.+.|
T Consensus 339 ~~~~~~~~~~~L 350 (401)
T 2bwn_A 339 DPVHTKAVSDML 350 (401)
T ss_dssp CHHHHHHHHHHH
T ss_pred ChHHHHHHHHHH
Confidence 433344554444
No 125
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=98.75 E-value=3.1e-08 Score=91.13 Aligned_cols=170 Identities=14% Similarity=0.155 Sum_probs=101.3
Q ss_pred CccccCCEEEEecCCCCCC------------CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-H-
Q 027424 1 MAHAHGALLLVDNSIMSPV------------LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-N- 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~------------~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-~- 66 (223)
+|+++|++|+||++++... .++....|+|+++.|.+|++.|.. -.|+++++++.+........ .
T Consensus 264 la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~ 341 (514)
T 3mad_A 264 LAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAK--GTSVILYRRPDLLHYQYFIAADW 341 (514)
T ss_dssp HHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCS--SCEEEEESSHHHHTTTCEEESSC
T ss_pred HHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCC--CeEEEEEeCHHHhcccccccccc
Confidence 4789999999999987532 123345689999999999966542 24666677654322110000 0
Q ss_pred ---------hcCCCCCh---HhHHHHHhcHH--HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh
Q 027424 67 ---------AEGSGLAP---FDCWICLRGVK--TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 67 ---------~~g~~~sp---~da~ll~~~l~--tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~ 132 (223)
..| +.+. ..++..++.+. .+..++++..+++..+.+.|++.|.+. +..|
T Consensus 342 ~~~~~~~~~~~g-s~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~--------------- 404 (514)
T 3mad_A 342 PGGLYFSPTFAG-SRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLK-ILGD--------------- 404 (514)
T ss_dssp TTCSEEESSSCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCE-ESSC---------------
T ss_pred CCCcccCCccCC-CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeCC---------------
Confidence 011 1111 23444444333 356678899999999999999988763 3333
Q ss_pred CCCCeeEEEEeC--CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec-----CC
Q 027424 133 KGAGSVLSFLTG--SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IE 205 (223)
Q Consensus 133 ~g~ggl~sf~~~--~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG-----lE 205 (223)
..+++.|... +.....+.+..-++.- .+. + .++.+|++++ -|
T Consensus 405 --~~~~~~~~~~~~~~~~l~~~L~~~Gi~v-----~g~-----------~-------------~~~~~Ri~~~~~~~~~e 453 (514)
T 3mad_A 405 --PLWVIAVASDELNIYQVMEEMAGRGWRL-----NGL-----------H-------------RPPAFHVALTLRHTEPG 453 (514)
T ss_dssp --CSSEEEEECSSSCHHHHHHHHHTTTCBC-----EEE-----------T-------------TTTEEEEECCGGGGSTT
T ss_pred --CeEEEEEeCCCCCHHHHHHHHHhcCCEe-----ccC-----------C-------------CCCeEEEEEecCCCCHH
Confidence 1347888763 2222222222223221 000 0 1356999998 47
Q ss_pred CHHHHHHHHHHHHhc
Q 027424 206 DVNDLISDLDKALRT 220 (223)
Q Consensus 206 d~~dL~~dl~~Al~~ 220 (223)
+.+++++.|+++++.
T Consensus 454 ~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 454 VVDRFLADLQDAVAQ 468 (514)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999998863
No 126
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=98.75 E-value=5.5e-08 Score=85.80 Aligned_cols=179 Identities=19% Similarity=0.205 Sum_probs=101.2
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccCCCcEEEecccccccCCcccceeEEEecC--hhHHHHHHHHHHh--cCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG--ERLAKELYFLQNA--EGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~--~~~~~~l~~~~~~--~g~~ 71 (223)
+|+++|+++|+|++++.++. ..++. .+|+++.|++|+++|.. ||+++.++ +.+.+.+...... .+..
T Consensus 192 l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~g~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (420)
T 3gbx_A 192 IADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKTLAGPR---GGLILAKGGDEELYKKLNSAVFPSAQGGP 267 (420)
T ss_dssp HHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGGGCSCS---CEEEEESSCCHHHHHHHHHHHC----CCC
T ss_pred HHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccCCCCCC---ceEEEEcCCcHHHHHHhhhhcCCCCCCCc
Confidence 47899999999999754322 34444 48999999999998653 68887765 3565555433211 1211
Q ss_pred CChHhHHH--HH-hcH-HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC---
Q 027424 72 LAPFDCWI--CL-RGV-KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--- 144 (223)
Q Consensus 72 ~sp~da~l--l~-~~l-~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~--- 144 (223)
..+.-+.+ .+ ..+ +.+..+.++..+++..+.+.|++. .+ ++..| ...+.++.+.+.
T Consensus 268 ~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~---------------~~~~~~~~~~~~~~~ 330 (420)
T 3gbx_A 268 LMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GY-KVVSG---------------GTENHLFLLDLVDKN 330 (420)
T ss_dssp CHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TC-EEGGG---------------SCSSSEEEEECGGGT
T ss_pred chhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CC-eeccC---------------CCCCeEEEEEcCCCC
Confidence 11211111 11 111 334566788888999999999873 33 22221 113556666652
Q ss_pred -CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC--------CCHHHHHHHHH
Q 027424 145 -SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------EDVNDLISDLD 215 (223)
Q Consensus 145 -~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl--------Ed~~dL~~dl~ 215 (223)
+.+...++++.-++.-...+. |..... ...+.-+||++.. |+.+.+++-|+
T Consensus 331 ~~~~~~~~~l~~~gi~v~~~~~---------~~~~~~-----------~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~ 390 (420)
T 3gbx_A 331 LTGKEADAALGRANITVNKNSV---------PNDPKS-----------PFVTSGIRIGSPAVTRRGFKEAEVKELAGWMC 390 (420)
T ss_dssp CCHHHHHHHHHHTTEECEEECC---------TTCSSC-----------TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCcEeccccC---------CCCccc-----------cCCCcceEEecchhcccCCCHHHHHHHHHHHH
Confidence 344455555554543211110 110000 0122349999863 67888888888
Q ss_pred HHHhc
Q 027424 216 KALRT 220 (223)
Q Consensus 216 ~Al~~ 220 (223)
++|+.
T Consensus 391 ~~l~~ 395 (420)
T 3gbx_A 391 DVLDN 395 (420)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 88865
No 127
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=98.75 E-value=6e-08 Score=88.89 Aligned_cols=178 Identities=13% Similarity=0.185 Sum_probs=100.8
Q ss_pred CccccCCEEEEecCCCCCCCcCc----cc-C-CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP----LE-L-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE------ 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p----l~-~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~------ 68 (223)
+|+++|++++||++++.+....+ +. . ++|+++.|.||+++++. . .|+++++++...+.+.....++
T Consensus 283 l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~-~-~G~l~~~~~~~~~~~~~~~~yl~~~~~~ 360 (497)
T 2qma_A 283 MAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTI-S-CGALLVNDKSNFKFLLHHADYLNREHDE 360 (497)
T ss_dssp HHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCS-S-CEEEEESCGGGGGGGCC-----------
T ss_pred HHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCc-c-eEEEEEeCHHHHHHhcCCchhcCCcccc
Confidence 47899999999999876544222 11 2 78999999999998763 2 4556666654322221100000
Q ss_pred -----CCCC------ChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCC
Q 027424 69 -----GSGL------APFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 135 (223)
Q Consensus 69 -----g~~~------sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ 135 (223)
+.++ .....|..++ +.+.+..++++..+++..+++.|++.|.+ ++..| | .
T Consensus 361 ~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~-----~-----------~ 423 (497)
T 2qma_A 361 LPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQF-ELLAE-----P-----------S 423 (497)
T ss_dssp ---------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTE-EECSC-----C-----------S
T ss_pred CCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCe-EEEcC-----C-----------C
Confidence 0000 0111232333 33456677888999999999999998876 44333 1 2
Q ss_pred CeeEEEEeCCH-----HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec-----CC
Q 027424 136 GSVLSFLTGSL-----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IE 205 (223)
Q Consensus 136 ggl~sf~~~~~-----~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG-----lE 205 (223)
+++++|.+.+. +...++.+.+. ..|.- + .+.+. .+ ..+.+|+|++ .|
T Consensus 424 ~~~v~f~~~~~~~~~~~l~~~l~~~l~--~~G~~-------~-~~~~~------------~~-g~~~lRis~~~~~~t~e 480 (497)
T 2qma_A 424 LSTVLFRATHETADLDELNKALRLEAL--TRGIA-------V-LGETI------------VD-GKTALKFTILNPCLTTS 480 (497)
T ss_dssp SSEEEEEECCSSSCHHHHHHHHHHHHH--HHTSC-------B-CEEEE------------ET-TEEEEEEECCCTTCCHH
T ss_pred ceEEEEEEcCCccCHHHHHHHHHHHHH--hCCCE-------E-EEeeE------------EC-CEEEEEEEecCCCCCHH
Confidence 56999987321 11223333321 11110 0 11100 00 2357999994 55
Q ss_pred CHHHHHHHHHHHHhc
Q 027424 206 DVNDLISDLDKALRT 220 (223)
Q Consensus 206 d~~dL~~dl~~Al~~ 220 (223)
|.+.+++.|+++++.
T Consensus 481 di~~~~~~l~~~~~~ 495 (497)
T 2qma_A 481 DFESLLSKINMLAVE 495 (497)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 677788888877654
No 128
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=98.74 E-value=5.6e-08 Score=85.13 Aligned_cols=178 Identities=15% Similarity=0.078 Sum_probs=98.1
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--------------
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------------- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-------------- 65 (223)
+|+++|+++|+|++++.+.. ...-.+|+|+++.|++|++.|..-. |+++++ +++.++++...
T Consensus 159 l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~--G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~ 235 (392)
T 2z9v_A 159 LVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGL--TMMGVS-ERAWAKMKANPLAPRASMLSIVDWE 235 (392)
T ss_dssp HHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCC--EEEEEC-HHHHHHHHTCTTSCCSSTTCSGGGT
T ss_pred HHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCce--eEEEEC-HHHHHHhhhccCCCCceeccHHHHH
Confidence 47899999999999864322 1222358999999999987764322 667665 45555553210
Q ss_pred ------HhcCCCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCC
Q 027424 66 ------NAEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 134 (223)
Q Consensus 66 ------~~~g~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g 134 (223)
.....+.++.....+...++.+ ....++..+++..+.+.|++. .+ ++..|. +. ..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~----~~--------~~ 301 (392)
T 2z9v_A 236 NAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GL-SVWAAS----DS--------IA 301 (392)
T ss_dssp TTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC-CBSSSS----GG--------GB
T ss_pred hhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CC-eeccCC----cc--------cc
Confidence 0111123333333334455443 334567777888888888876 43 232221 00 12
Q ss_pred CCeeEEEEeC---CHHH-HHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE-ec----CC
Q 027424 135 AGSVLSFLTG---SLAL-SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS-VG----IE 205 (223)
Q Consensus 135 ~ggl~sf~~~---~~~~-~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls-vG----lE 205 (223)
.++++.|.+. +.+. .+++.++-++. +.-|.. + ..++.+||| .| -|
T Consensus 302 ~~~~~~~~~~~~~~~~~l~~~L~~~~gi~---v~~g~~------~-----------------~~~~~lRi~~~~~~~~~~ 355 (392)
T 2z9v_A 302 SPTTTAVRTPDGVDEKALRQAARARYGVV---FSSGRG------E-----------------TLGKLTRIGHMGPTAQPI 355 (392)
T ss_dssp CTTEEEEECCTTCCHHHHHHHHHHHHCEE---CEECCG------G-----------------GTTTEEEEECCGGGCSHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHhcCCEE---EecCCC------C-----------------CCCCeEEEeCcccccCHH
Confidence 4678888873 2222 22222222332 121210 0 135789999 47 44
Q ss_pred CHHHHHHHHHHHHhcC
Q 027424 206 DVNDLISDLDKALRTG 221 (223)
Q Consensus 206 d~~dL~~dl~~Al~~~ 221 (223)
|.+.+++.|+++++..
T Consensus 356 ~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 356 YAIAALTALGGAMNAA 371 (392)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5677778888877643
No 129
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.74 E-value=7.1e-07 Score=79.29 Aligned_cols=83 Identities=13% Similarity=0.040 Sum_probs=54.9
Q ss_pred Cc-cccCCEEEEecCCCCCCCc--------Ccc-------cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH
Q 027424 1 MA-HAHGALLLVDNSIMSPVLS--------RPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 64 (223)
Q Consensus 1 ia-~~~g~~lvVDnT~~s~~~~--------~pl-------~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~ 64 (223)
+| +++|+++|+|++++...+. +.+ ..+.+|++.|++|+ .+.+..+| +++. ++++.+.+...
T Consensus 201 ~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G-~~~~-~~~~~~~~~~~ 277 (423)
T 3ez1_A 201 LQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLG-FVAS-SEDNIRWLSKY 277 (423)
T ss_dssp CCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCE-EEEE-CHHHHHHHHHH
T ss_pred HHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceE-EEEe-CHHHHHHHHHH
Confidence 46 8999999999998632111 111 23567999999997 34455554 5655 45677777766
Q ss_pred HHhcCCCCChHhHHHHHhcHHH
Q 027424 65 QNAEGSGLAPFDCWICLRGVKT 86 (223)
Q Consensus 65 ~~~~g~~~sp~da~ll~~~l~t 86 (223)
....+...++...+.+...++.
T Consensus 278 ~~~~~~~~~~~~~~a~~~~l~~ 299 (423)
T 3ez1_A 278 LGAQSIGPNKVEQARHVKFLTE 299 (423)
T ss_dssp HHHSCSCCCHHHHHHHHHHHHH
T ss_pred HhhhccCCCHHHHHHHHHHHHh
Confidence 6666656777766666666665
No 130
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=98.73 E-value=4.4e-08 Score=89.97 Aligned_cols=113 Identities=12% Similarity=0.146 Sum_probs=73.6
Q ss_pred CccccCCEEEEecCCCCCCCc-----Cccc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHH-HHHHhc-CCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-FLQNAE-GSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~-~~~~~~-g~~ 71 (223)
+|+++|++++||.+++.+... ..+. .++|+++-|.||+++++. -+|+++++++++.+... ....+. +..
T Consensus 270 la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~--~~g~l~~~~~~~~~~~~~~~~~~l~~~~ 347 (504)
T 2okj_A 270 ICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLL--QCSAILVKEKGILQGCNQMCAGYLFQPD 347 (504)
T ss_dssp HHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESSTTHHHHHHCCCCSSSCCSC
T ss_pred HHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCc--ceEEEEEECHHHHHHHhcCCCccccCCc
Confidence 478999999999998765432 2233 279999999999998763 25677777654433211 111111 100
Q ss_pred -------------------CChHhHHHHHhcH--HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEc
Q 027424 72 -------------------LAPFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNY 116 (223)
Q Consensus 72 -------------------~sp~da~ll~~~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~y 116 (223)
......|.+++.+ +.+..++++..+++..+++.|++.|.+ ++..
T Consensus 348 ~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~ 412 (504)
T 2okj_A 348 KQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEF-EMVF 412 (504)
T ss_dssp CSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTE-EESS
T ss_pred ccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCE-EEEe
Confidence 1234455555544 345667888999999999999998886 4444
No 131
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.73 E-value=4.7e-09 Score=96.49 Aligned_cols=104 Identities=14% Similarity=0.168 Sum_probs=72.5
Q ss_pred CccccCCEEEEecCCCCCCC------cCcccCC-CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC-CC
Q 027424 1 MAHAHGALLLVDNSIMSPVL------SRPLELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~------~~pl~~G-ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~-~~ 72 (223)
+||++|+|++|||+||.++. ...+++| ||++|+|+||.+--| +-||.+..+++++.+++ ...+.|. +.
T Consensus 241 Ich~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvp--IGG~ii~~~d~e~l~~~--~~~yPGr~S~ 316 (501)
T 3hl2_A 241 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP--VGGAIIAGFNDSFIQEI--SKMYPGRASA 316 (501)
T ss_dssp HHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCC--SSCEEEEESCHHHHHHH--HHTSCSCBCS
T ss_pred HHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceee--cCceEEEeCCHHHHHHH--HHhCCCCCCC
Confidence 58999999999999999863 2356679 999999999998755 33445546776665554 2233342 24
Q ss_pred Ch-HhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 73 AP-FDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp-~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
+| .+.|+.+. |.+-+...+++..+++..+.+.|++.
T Consensus 317 Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~l 355 (501)
T 3hl2_A 317 SPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKL 355 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55 34444333 44456677789999999999988863
No 132
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=98.72 E-value=4e-07 Score=79.70 Aligned_cols=106 Identities=14% Similarity=0.010 Sum_probs=70.6
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc--cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl--~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|++++.... .... ..+.|+++.|++|.++..+..+ |+++++ +++.+.+.........+.++
T Consensus 180 ~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~-G~~~~~-~~~~~~~~~~~~~~~~~~~~ 257 (381)
T 1v2d_A 180 LARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRV-GWIVGP-KEFMPRLAGMRQWTSFSAPT 257 (381)
T ss_dssp HHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCC-EEEECC-TTTHHHHHHHHHHHTSSCCH
T ss_pred HHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccce-EEEEeC-HHHHHHHHHHHhhcccCCCc
Confidence 37899999999999864321 1122 3489999999999997566444 556555 45666666554443445566
Q ss_pred HhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcC
Q 027424 75 FDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 75 ~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~ 108 (223)
...+.+...|+.. ..+.++..+++..+.+.|++.
T Consensus 258 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (381)
T 1v2d_A 258 PLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM 297 (381)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 6556666666643 334566777888888888874
No 133
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=98.71 E-value=9.6e-08 Score=83.64 Aligned_cols=176 Identities=14% Similarity=0.152 Sum_probs=97.5
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH----H---------
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----N--------- 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~----~--------- 66 (223)
+|+++|+++|+|++++.+.. ...-++++|+++.|++|++.|.... |+++++ +++.+.+.... .
T Consensus 169 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (393)
T 2huf_A 169 LCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGI--TPVSFS-HRAVERYKRRNTKVKVYYWDMSLVG 245 (393)
T ss_dssp HHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSC--EEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHH
T ss_pred HHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCe--EEEEEC-HHHHHHHhhcCCCCceEEEchHHHH
Confidence 47899999999999753321 1222357999999999987754322 666665 55655554220 0
Q ss_pred -hcC---------CCCChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhh
Q 027424 67 -AEG---------SGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 131 (223)
Q Consensus 67 -~~g---------~~~sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~ 131 (223)
..+ .+.+......+...++. +..+.++..+++..+.+.|++. ++ ++..| +.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~-----~~------- 311 (393)
T 2huf_A 246 DYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GF-ELYAD-----PK------- 311 (393)
T ss_dssp HHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC-CBSSC-----GG-------
T ss_pred hhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-eeccC-----cc-------
Confidence 011 12233222223334443 3345577788889999999876 43 22222 00
Q ss_pred hCCCCeeEEEEeC---CHHH-HHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEe-cC--
Q 027424 132 AKGAGSVLSFLTG---SLAL-SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-GI-- 204 (223)
Q Consensus 132 ~~g~ggl~sf~~~---~~~~-~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsv-Gl-- 204 (223)
...++++.|.+. +.+. .+++.+.-++. +.-|.. + ..++.+|||+ |.
T Consensus 312 -~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~---v~~g~~------~-----------------~~~~~~Ri~~~~~~~ 364 (393)
T 2huf_A 312 -DRLSTVTTIKVPQGVDWLKAAQYAMKTYLVE---ISGGLG------P-----------------TAGQVFRIGLMGQNA 364 (393)
T ss_dssp -GBCTTEEEEECCTTCCHHHHHHHHHHHHCEE---CBCCCG------G-----------------GTTTEEEEECCGGGC
T ss_pred -ccCCcEEEEEcCCCCCHHHHHHHHHHhCCEE---EecCcc------c-----------------ccCCEEEEEcccCcC
Confidence 013458888873 2222 22222332332 222211 0 1357899999 83
Q ss_pred --CCHHHHHHHHHHHHhc
Q 027424 205 --EDVNDLISDLDKALRT 220 (223)
Q Consensus 205 --Ed~~dL~~dl~~Al~~ 220 (223)
|+.+.+++.|+++++.
T Consensus 365 ~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 365 TTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 2467778888877763
No 134
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=98.70 E-value=1.6e-07 Score=84.08 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=63.3
Q ss_pred CccccCCEEEEecCCCCCCC-----cCcccCCC-------------cEEEecccccccCCcccceeEEEecChhHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLELGA-------------DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~~GA-------------Divv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~ 62 (223)
+|+++|+++|+|++++...+ .....++. .+++.|++|.++..+..+ |+++++++.+.+.+.
T Consensus 219 ~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~-G~~~~~~~~~~~~~~ 297 (435)
T 3piu_A 219 FVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRV-GAIYSNDDMVVAAAT 297 (435)
T ss_dssp HHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCE-EEEEESCHHHHHHHH
T ss_pred HHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeE-EEEEeCCHHHHHHHH
Confidence 37899999999999754211 11111122 289999999997555555 456666666666555
Q ss_pred HHHHhcCCCCChHhHHHHHhcHHH-------HHHHHHHHHhHHHHHHHHHhcC
Q 027424 63 FLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 63 ~~~~~~g~~~sp~da~ll~~~l~t-------l~~R~~~~~~na~~la~~L~~~ 108 (223)
...... ..++.....+...++. +..+.++..++...+.+.|+++
T Consensus 298 ~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 298 KMSSFG--LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp HHGGGS--CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhhcC--CCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 443332 2345444443333332 2333466677888888899876
No 135
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=98.70 E-value=3.7e-07 Score=81.46 Aligned_cols=182 Identities=13% Similarity=0.083 Sum_probs=97.7
Q ss_pred Cc-cccCCEEEEecCCCCCCC-c------Ccc-------cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH
Q 027424 1 MA-HAHGALLLVDNSIMSPVL-S------RPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 65 (223)
Q Consensus 1 ia-~~~g~~lvVDnT~~s~~~-~------~pl-------~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~ 65 (223)
+| +++|+++|+|++++...+ . +.+ ..+.+|++.|++|+ .+.+..+| +++. ++++.+.+....
T Consensus 209 ~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G-~~~~-~~~l~~~~~~~~ 285 (427)
T 3ppl_A 209 METAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVS-FFLT-SAENRKWYTGHA 285 (427)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCE-EEEC-CHHHHHHHHHHH
T ss_pred HHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEE-EEEc-CHHHHHHHHHHh
Confidence 46 899999999999864211 1 111 23567999999999 55566655 5544 466777776666
Q ss_pred HhcCCCCChHhHHHHHhcHHH---HH---HHH-HHHHhHHHHHHHHHhcC-CC--eeEEEcCCCCCCcchHHHHhhhCCC
Q 027424 66 NAEGSGLAPFDCWICLRGVKT---MA---LRV-EKQQDNAQKIAEFLASH-PR--VKKVNYAGLPEHPGHELHYSQAKGA 135 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l~t---l~---~R~-~~~~~na~~la~~L~~~-p~--v~~V~yP~l~~~~~~~~~~~~~~g~ 135 (223)
...+...++.....+...++. +. .++ +...++...+.+.|+++ |. ..++..| ..
T Consensus 286 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p----------------~~ 349 (427)
T 3ppl_A 286 GIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVP----------------AG 349 (427)
T ss_dssp HHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCC----------------SB
T ss_pred hcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCC----------------Cc
Confidence 555555676655555544443 21 122 33344555566666542 22 1234444 13
Q ss_pred CeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCC---CHHHHHH
Q 027424 136 GSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE---DVNDLIS 212 (223)
Q Consensus 136 ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE---d~~dL~~ 212 (223)
|..+.+++.+. ....|.+.+.--.+.+.-|+.. .+. ..+-.++.+|||++.. +.++.++
T Consensus 350 g~~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~----~~~-------------~~~~~~~~~Ris~~~~~~~~i~~~~~ 411 (427)
T 3ppl_A 350 GYFISLDVVPG-TASRVAELAKEAGIALTGAGSS----YPL-------------RQDPENKNLRLAPSLPPVEELEVAMD 411 (427)
T ss_dssp SSCEEEECSTT-CHHHHHHHHHHTTEECCCTTTT----SGG-------------GCCTTSCEEEECCSSSCHHHHHHHHH
T ss_pred cEEEEEECCcc-hHHHHHHHHHHCCCEEecCcCc----CCC-------------CCCCCCCeEEEECCCCCHHHHHHHHH
Confidence 55566777421 1233333332112222222210 000 0011467899999984 4555566
Q ss_pred HHHHHHh
Q 027424 213 DLDKALR 219 (223)
Q Consensus 213 dl~~Al~ 219 (223)
.|.++++
T Consensus 412 ~l~~~l~ 418 (427)
T 3ppl_A 412 GVATCVL 418 (427)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666665
No 136
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=98.70 E-value=3.8e-07 Score=80.53 Aligned_cols=178 Identities=16% Similarity=0.179 Sum_probs=100.6
Q ss_pred CccccCCEEEEecCCCC-----CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh--cCCCCC
Q 027424 1 MAHAHGALLLVDNSIMS-----PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-----~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--~g~~~s 73 (223)
+|+++|+++|+|+++.. +....++.. +|+++.|++|+++|. .+|+++.+++.+.+.+...... .+....
T Consensus 195 l~~~~~~~li~De~~~~g~~~~~~~~~~~~~-~di~~~s~sK~l~g~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (425)
T 3ecd_A 195 IADSVGAKLMVDMAHIAGVIAAGRHANPVEH-AHVVTSTTHKTLRGP---RGGFVLTNDEEIAKKINSAVFPGLQGGPLM 270 (425)
T ss_dssp HHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEESSGGGCCC---SCEEEEESCHHHHHHHHHHHC-----CCCH
T ss_pred HHHHcCCEEEEECcChHhhhhcccccCchhc-CcEEEecCCcccCCC---CcEEEEeCCHHHHHHHHhhhCccccCCccH
Confidence 47899999999999432 223445553 899999999999875 3688877766666655443221 111122
Q ss_pred hHhHHHHHhcH-----HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC----
Q 027424 74 PFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG---- 144 (223)
Q Consensus 74 p~da~ll~~~l-----~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~---- 144 (223)
+.-+. +..++ +.+..+.++..+++..+.+.|++.. + .+..|+ +.+.++.+.+.
T Consensus 271 ~~~~a-~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~~---------------~~~~~~~~~~~~~~~ 332 (425)
T 3ecd_A 271 HVIAG-KAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGG-V-DLVTGG---------------TDNHLLLVDLRPKGL 332 (425)
T ss_dssp HHHHH-HHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-C-EEGGGS---------------CSSSEEEEECGGGTC
T ss_pred HHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCC-C-eeccCC---------------CCceEEEEEeCCCCC
Confidence 22121 12222 2344566778888888999998743 3 333221 24567777762
Q ss_pred CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec--------CCCHHHHHHHHHH
Q 027424 145 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLISDLDK 216 (223)
Q Consensus 145 ~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--------lEd~~dL~~dl~~ 216 (223)
+.+...+.+..-++.-.. ++ .|.... ....++.+|++.+ -|+.+.+++-|++
T Consensus 333 ~~~~~~~~l~~~gi~v~~---~~------~p~~~~-----------~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~ 392 (425)
T 3ecd_A 333 KGAQVEQALERAGITCNK---NG------IPFDPE-----------KPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE 392 (425)
T ss_dssp CHHHHHHHHHHTTEECEE---CC------CTTCSS-----------CTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCEecc---cc------cCCCCC-----------CCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence 334455555554443211 11 111000 0012456899833 4677888888888
Q ss_pred HHhc
Q 027424 217 ALRT 220 (223)
Q Consensus 217 Al~~ 220 (223)
+++.
T Consensus 393 ~l~~ 396 (425)
T 3ecd_A 393 VFEA 396 (425)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7764
No 137
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=98.70 E-value=1.4e-06 Score=76.82 Aligned_cols=181 Identities=17% Similarity=0.184 Sum_probs=102.5
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH------------HH---
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF------------LQ--- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~------------~~--- 65 (223)
+||++|+++++|++.+....+.+.++|+|+++.|.+|+++|+.. .|++++++ ++.+.+.. +.
T Consensus 163 ~~~~~~~~li~D~~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~g--~g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~ 239 (379)
T 3ke3_A 163 AVHSVGGLLVIDCIASGCVWLDMKELGIDVLISAPQKGWSSTPC--AGLVMLSA-AAIKKVESTESNCFSLDLKQWLTIM 239 (379)
T ss_dssp HHHHTTCEEEEECTTCTTCCCCHHHHTCSEEEECTTTTTCSCCC--EEEEEECH-HHHHHHHTCCCSCSTTCHHHHHHHH
T ss_pred HHHHcCCEEEEEecccCCccccccccCCCEEEecchhhcCCCCc--eEEEEECH-HHHHhhhcCCCCceeecHHHHHHHH
Confidence 47899999999999873333444456999999999999987632 46666554 44444321 00
Q ss_pred -H-hcC-----CCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 66 -N-AEG-----SGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 66 -~-~~g-----~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
. ..| .+.++...+-+..+++.+ ..+.++..+++..+.+.|++.. + ++.-| +. .
T Consensus 240 ~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g-~-~~~~~-----~~--------~ 304 (379)
T 3ke3_A 240 RAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKG-I-ESVAA-----EG--------F 304 (379)
T ss_dssp HHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-C-CBSBC-----TT--------C
T ss_pred HhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC-C-EecCC-----cc--------c
Confidence 0 011 144555555555666654 3445666777778888887763 2 22111 10 0
Q ss_pred CCCeeEEEEeCCHHHH-HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHH
Q 027424 134 GAGSVLSFLTGSLALS-KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVN 208 (223)
Q Consensus 134 g~ggl~sf~~~~~~~~-~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~ 208 (223)
..+.+..|...+.+.. .+.++.-+++ . +-|...+ +..| ...+.+|+|.. -||++
T Consensus 305 ~~~~i~~~~~~~~~~~~~~~L~~~Gi~-v--~~g~~~~-~~~~-----------------~~~~~lRis~~~~~t~~di~ 363 (379)
T 3ke3_A 305 EAPGVVVSYTERDDMHKGSAFAEAGLQ-I--AAGVPLK-VGEP-----------------DNFKTFRLGLFGLDKLTDID 363 (379)
T ss_dssp BCSSEEEEECSCHHHHSSHHHHHTTCC-C--EECCCCS-SCCC-----------------TTCCEEEEECCSHHHHTCHH
T ss_pred cCceEEEEccCCcchHHHHHHHHCCeE-E--eCCcccc-cccc-----------------CcCCEEEEeCCcCCCHHHHH
Confidence 1344555655544321 2223333332 1 1121111 0000 13578999986 47899
Q ss_pred HHHHHHHHHHhc
Q 027424 209 DLISDLDKALRT 220 (223)
Q Consensus 209 dL~~dl~~Al~~ 220 (223)
.+++-|+++++.
T Consensus 364 ~~~~~l~~~l~~ 375 (379)
T 3ke3_A 364 GTVERFEKALDE 375 (379)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988864
No 138
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=98.68 E-value=8.5e-08 Score=84.38 Aligned_cols=102 Identities=14% Similarity=0.071 Sum_probs=60.8
Q ss_pred cCCEEEEecCCCCCCCc---Cc---ccCCCcEEEecccccccCCcccceeEEEecChh-----HHHHHHHHHHhcC-CCC
Q 027424 5 HGALLLVDNSIMSPVLS---RP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGER-----LAKELYFLQNAEG-SGL 72 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~~~---~p---l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~-----~~~~l~~~~~~~g-~~~ 72 (223)
+|+++|+|++++..... .| -..+.++++.|++|.++.++..+|. ++++++. +...+.......+ ...
T Consensus 210 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (398)
T 3ele_A 210 RPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGY-VLVPDEVYDKAELYAAVCGAGRALGYVCA 288 (398)
T ss_dssp SCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEE-EECCTTSTTHHHHHHHHHHHHHHTTCCCS
T ss_pred CCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEE-EEEcchhhhHHHHHHHHHHHhhhccccCC
Confidence 89999999998642211 11 1235679999999999866766655 5455541 2333333333333 234
Q ss_pred ChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 73 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
++...+.+...++... +.++..++...+.+.|++.
T Consensus 289 ~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~L~~~ 323 (398)
T 3ele_A 289 PSLFQKMIVKCQGATG-DINAYKENRDLLYEGLTRI 323 (398)
T ss_dssp CHHHHHHHTTCTTCCC-CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHHc
Confidence 4455555555554322 3456667778888888875
No 139
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=98.68 E-value=1e-07 Score=83.83 Aligned_cols=176 Identities=16% Similarity=0.155 Sum_probs=100.4
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--------------
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------------- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-------------- 65 (223)
+|+++|+++|+|++++.+.. ...-..|+|+++.|.+|++.|... .|+++++ +++.+.+....
T Consensus 163 l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~gg 239 (411)
T 3nnk_A 163 ICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSG--TSPITLS-ARMEEAIRRRKCVEEGIRTDAHRDG 239 (411)
T ss_dssp HHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSS--EEEEEEC-HHHHHHHHTTCCCCGGGCCTTCCCC
T ss_pred HHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCc--eEEEEEC-HHHHHHHhhcccccccccccccccc
Confidence 47899999999999754322 333456899999999999766542 4666655 45555543221
Q ss_pred ----------------------HhcCCCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCC
Q 027424 66 ----------------------NAEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 118 (223)
Q Consensus 66 ----------------------~~~g~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~ 118 (223)
.....+.++.....+..+++.+ ..+.++..+++..+.+.|++. .+ ++..|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~- 316 (411)
T 3nnk_A 240 DEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-GL-ETFGD- 316 (411)
T ss_dssp SSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC-CBCSC-
T ss_pred cCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CC-EeCCC-
Confidence 0011123443333344445432 345577778888888888875 32 22212
Q ss_pred CCCCcchHHHHhhhCCCCeeEEEEeC---CHHHH-HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCC
Q 027424 119 LPEHPGHELHYSQAKGAGSVLSFLTG---SLALS-KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 194 (223)
Q Consensus 119 l~~~~~~~~~~~~~~g~ggl~sf~~~---~~~~~-~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~ 194 (223)
+ ....+.++.|.+. +.+.. +++.++-++. ..++.+ + ..
T Consensus 317 ----~--------~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~-v~~g~~--------~-----------------~~ 358 (411)
T 3nnk_A 317 ----L--------KHKMNNVLGVVIPQGINGDQARKLMLEDFGIE-IGTSFG--------P-----------------LH 358 (411)
T ss_dssp ----G--------GGBCSSEEEEECCTTCCHHHHHHHHHHHHSEE-EEECCG--------G-----------------GT
T ss_pred ----c--------ccccccEEEEECCCCCCHHHHHHHHHHhcCeE-EeCccC--------C-----------------CC
Confidence 1 1225778888873 22222 2333333433 111110 0 13
Q ss_pred CCeEEEEe-cC----CCHHHHHHHHHHHHhc
Q 027424 195 EDLVRISV-GI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 195 ~~liRlsv-Gl----Ed~~dL~~dl~~Al~~ 220 (223)
++.+|||+ |. |+.+.+++.|+++++.
T Consensus 359 ~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 389 (411)
T 3nnk_A 359 GKVWRIGTMGYNARKDCVMTTLSALEAVLNY 389 (411)
T ss_dssp TTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCccCcCCHHHHHHHHHHHHHHHHH
Confidence 56899998 84 4467777778777764
No 140
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=98.67 E-value=4.2e-07 Score=83.73 Aligned_cols=110 Identities=15% Similarity=0.068 Sum_probs=68.1
Q ss_pred CccccCCEEEEecCCCCCCCc-----Cccc-----CCC-------cEEEecccccccC-CcccceeEEEe-cChhHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPLE-----LGA-------DIVMHSATKFIAG-HSDVMAGVLAV-KGERLAKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl~-----~GA-------Divv~S~tK~l~G-~~d~~~G~v~~-~~~~~~~~l 61 (223)
+|+++|++||+|++++...+. .++. .+. -|+++|+||.++| .+..+|.+++. .++++.+.+
T Consensus 263 la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l 342 (498)
T 3ihj_A 263 FAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQL 342 (498)
T ss_dssp HHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHH
T ss_pred HHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHH
Confidence 478999999999998764332 1111 121 2789999999966 44455444332 466777777
Q ss_pred HHHHHhcCCCCChHhHHHHHhcH--------------HHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 62 YFLQNAEGSGLAPFDCWICLRGV--------------KTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 62 ~~~~~~~g~~~sp~da~ll~~~l--------------~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
........ +.++.....+...+ +.+..+.++..+++..+.+.|++.|.+
T Consensus 343 ~~~~~~~~-~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~ 405 (498)
T 3ihj_A 343 VKLLSVRL-CPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGI 405 (498)
T ss_dssp HHHHHHSC-CCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred HHHHhccC-CCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 65554332 33433333333222 223445577889999999999998875
No 141
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=98.66 E-value=5.1e-07 Score=80.05 Aligned_cols=106 Identities=15% Similarity=0.027 Sum_probs=68.1
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc-----cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl-----~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++.... ..++ ..+.|+++.|++|.++.++..+ |+++++ +++.+.+.......+.+
T Consensus 188 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~-~~~~~~l~~~~~~~~~~ 265 (411)
T 2o0r_A 188 IAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKI-GWACGP-AELIAGVRAAKQYLSYV 265 (411)
T ss_dssp HHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCE-EEEECC-HHHHHHHHHHHHHHTSC
T ss_pred HHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceE-EEEeeC-HHHHHHHHHHHhhccCC
Confidence 47899999999999864321 1112 1478999999999998666555 556554 56767666554433333
Q ss_pred CChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~~ 108 (223)
.++.....+...|+. +....++..++...+.+.|+++
T Consensus 266 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 306 (411)
T 2o0r_A 266 GGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEI 306 (411)
T ss_dssp CCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 445444444555543 3334466667778888888876
No 142
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=98.65 E-value=1.9e-06 Score=76.90 Aligned_cols=108 Identities=21% Similarity=0.259 Sum_probs=77.8
Q ss_pred CccccCCEEEEecCCCCCCCc--CcccCCCcEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHhc--------
Q 027424 1 MAHAHGALLLVDNSIMSPVLS--RPLELGADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-------- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~--~pl~~GADivv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~-------- 68 (223)
+|+++|+++|+|++++-++.. .++...+|+++.|++ |.++| ..+|+++.+++++.+++.......
T Consensus 160 la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~---~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~ 236 (424)
T 2po3_A 160 VADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNA---FEGGAVVTDDADLAARIRALHNFGFDLPGGSP 236 (424)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC---SSCEEEEESCHHHHHHHHHHHBTTTTCTTCCT
T ss_pred HHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccC---CCCeEEEeCCHHHHHHHHHHHhcCcccccccc
Confidence 478999999999998643322 344434799999998 88886 256778776567777665543321
Q ss_pred --C--CCCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 69 --G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 69 --g--~~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
| ..+++..+.+.+..++.+..+.++..+++..+.+.|++.|.+
T Consensus 237 ~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 283 (424)
T 2po3_A 237 AGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLADLPGV 283 (424)
T ss_dssp TCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCTTE
T ss_pred ccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 1 134566677777777778777888889999999999988765
No 143
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=98.65 E-value=1.9e-07 Score=85.20 Aligned_cols=177 Identities=16% Similarity=0.217 Sum_probs=103.2
Q ss_pred CccccCCEEEEecCCCCCCCcCc-cc------CCCcEEEecccccccCCcccceeEEEecChhH-HHHHHHHHHhc----
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP-LE------LGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNAE---- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p-l~------~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~-~~~l~~~~~~~---- 68 (223)
+||++|++++||.+++......| .. .+||.++-|.||+++++ .-+|+++++++.. .+.+.....++
T Consensus 260 la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p--~~~G~l~~~~~~~l~~~~~~~~~yl~~~~ 337 (486)
T 1js3_A 260 ICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN--FDCSAMWVKRRTDLTGAFKLDPVYLKHSH 337 (486)
T ss_dssp HHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC--SSCEEEEESCHHHHHGGGC----------
T ss_pred HHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC--cceEEEEEeCHHHHHHHhcCCchhhCCCc
Confidence 47899999999999976543221 11 27999999999999865 2357777777653 22221100000
Q ss_pred ----------------CCCCChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHh
Q 027424 69 ----------------GSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 130 (223)
Q Consensus 69 ----------------g~~~sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~ 130 (223)
+........|..++ +.+.+..++++..+++..+++.|++.|.++ +..| |
T Consensus 338 ~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~------- 404 (486)
T 1js3_A 338 QGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFE-VCAE-----V------- 404 (486)
T ss_dssp --CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECSC-----C-------
T ss_pred ccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeCC-----C-------
Confidence 00011223333333 445577778999999999999999998874 3332 1
Q ss_pred hhCCCCeeEEEEeC-CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-----
Q 027424 131 QAKGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----- 204 (223)
Q Consensus 131 ~~~g~ggl~sf~~~-~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----- 204 (223)
.+++++|.+. ......++.+.|.- .+ . ++..|.. . + ..+.+|+|++-
T Consensus 405 ----~~~~v~f~~~~~~~~~~~l~~~L~~--~g----~---~~~~~~~---~----------~-~~~~lRi~~~~~~~t~ 457 (486)
T 1js3_A 405 ----TLGLVCFRLKGSDGLNEALLERINS--AR----K---IHLVPCR---L----------R-GQFVLRFAICSRKVES 457 (486)
T ss_dssp ----CSSEEEEEESSCHHHHHHHHHHHHH--HT----S---CBCEEEE---E----------T-TEEEEEEECCCTTCCH
T ss_pred ----ceeEEEEEecChHHHHHHHHHHHHh--cC----C---EEEEEEE---E----------C-CEEEEEEEeCCCCCCH
Confidence 3678889874 32223445444421 11 0 0001110 0 0 24689999852
Q ss_pred CCHHHHHHHHHHHHh
Q 027424 205 EDVNDLISDLDKALR 219 (223)
Q Consensus 205 Ed~~dL~~dl~~Al~ 219 (223)
||.+.+++.|+++++
T Consensus 458 ~di~~~~~~l~~~~~ 472 (486)
T 1js3_A 458 GHVRLAWEHIRGLAA 472 (486)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 367778888877764
No 144
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.65 E-value=1.3e-08 Score=93.30 Aligned_cols=105 Identities=13% Similarity=0.108 Sum_probs=72.8
Q ss_pred CccccCCEEEEecCCCCCCCc------CcccC-CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC-CCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS------RPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~------~pl~~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g-~~~ 72 (223)
+||++|+||+|||+||.++.+ ..++. |||.+++|+||++. +.+++++++.++++..+++.. .+.| .+.
T Consensus 223 ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~--a~~~~~~l~~rd~~~~~~~~~--~~~g~~s~ 298 (450)
T 3bc8_A 223 ICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFM--VPVGGAIIAGFNEPFIQDISK--MYPGRASA 298 (450)
T ss_dssp HHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHS--CCSSCEEEEESCHHHHHHHHH--HSCSCBCS
T ss_pred HHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCC--chhccEEEEecCHHHHHHHHH--HhhcCCcc
Confidence 589999999999999986532 23344 89999999999998 778899888877665444422 2222 234
Q ss_pred Ch-HhHHHHHhc--HHHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 73 AP-FDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 73 sp-~da~ll~~~--l~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
|| .+.|..++. .+-+...+++..+++..+++.|++.+
T Consensus 299 SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 338 (450)
T 3bc8_A 299 SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLA 338 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 66 344443332 23344556777899999999998766
No 145
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=98.65 E-value=2.7e-07 Score=81.62 Aligned_cols=171 Identities=9% Similarity=0.076 Sum_probs=98.1
Q ss_pred CccccCCEEEEecCCCCCCCc----C--ccc-C--CCc--EEEecccccccCCcccceeEEEe--cChh----HHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS----R--PLE-L--GAD--IVMHSATKFIAGHSDVMAGVLAV--KGER----LAKELYF 63 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~----~--pl~-~--GAD--ivv~S~tK~l~G~~d~~~G~v~~--~~~~----~~~~l~~ 63 (223)
+|+++|+++|+|+++...... . ++. + ..| |++.|++|.++++|..+|+++ + .+++ +.+.+..
T Consensus 211 ~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~-~~~~~~~~~~~~~~~~~~ 289 (412)
T 1ajs_A 211 VMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLT-VVAKEPDSILRVLSQMQK 289 (412)
T ss_dssp HHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEE-EECSSHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEE-EecCCHHHHHHHHHHHHH
Confidence 378899999999997543221 1 222 1 234 889999999998787776654 4 2344 3333333
Q ss_pred HHHhcCCCCChHhHHHHHhcHHHH----------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhC
Q 027424 64 LQNAEGSGLAPFDCWICLRGVKTM----------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 133 (223)
Q Consensus 64 ~~~~~g~~~sp~da~ll~~~l~tl----------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~ 133 (223)
.......+.++...+.+...|+.. ....++..++...+.+.|++.+. |. ......
T Consensus 290 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~~-----~~~~~~---- 354 (412)
T 1ajs_A 290 IVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKT------PG-----TWNHIT---- 354 (412)
T ss_dssp HHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------SS-----CCHHHH----
T ss_pred HHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC------CC-----CeeEEc----
Confidence 232333334666666666666532 33346667777888888887641 10 011111
Q ss_pred CCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec---CCCHHHH
Q 027424 134 GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDL 210 (223)
Q Consensus 134 g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG---lEd~~dL 210 (223)
..||++.+.--+.+.+.+.++.-++.- .| + +|||++ -|+.+.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~gv~v-------------~~--------------------~-~Ris~~~~~~~~i~~~ 400 (412)
T 1ajs_A 355 DQIGMFSFTGLNPKQVEYLINQKHIYL-------------LP--------------------S-GRINMCGLTTKNLDYV 400 (412)
T ss_dssp HCCSSEEECCCCHHHHHHHHHTTCEEC-------------CT--------------------T-SEEEGGGCCTTTHHHH
T ss_pred CCCceEEEeCCCHHHHHHHHHhCCEEe-------------cC--------------------C-cEEEeeeCCHHHHHHH
Confidence 135565553212333344343333321 01 1 599999 3778999
Q ss_pred HHHHHHHHhcC
Q 027424 211 ISDLDKALRTG 221 (223)
Q Consensus 211 ~~dl~~Al~~~ 221 (223)
++.|+++++..
T Consensus 401 ~~~l~~~l~~~ 411 (412)
T 1ajs_A 401 ATSIHEAVTKI 411 (412)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999998754
No 146
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=98.64 E-value=3.3e-07 Score=82.82 Aligned_cols=178 Identities=20% Similarity=0.172 Sum_probs=102.2
Q ss_pred CccccCCEEEEecCCCCC-----CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHh--cCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSP-----VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-----~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--~g~~~s 73 (223)
+|+++|++|++|+++..+ ....+++ ++|+++.|++|+++|+ .+|+++.++ ++.+.+...... .|....
T Consensus 208 l~~~~g~lli~Dea~~~g~~~~g~~~~~~~-~~di~~~s~sK~l~G~---~gG~i~~~~-~~~~~l~~~~~~~~~~~~~~ 282 (447)
T 3h7f_A 208 IADEVGAKLLVDMAHFAGLVAAGLHPSPVP-HADVVSTTVHKTLGGG---RSGLIVGKQ-QYAKAINSAVFPGQQGGPLM 282 (447)
T ss_dssp HHHHHTCEEEEECTTTHHHHHTTSSCCSTT-TCSEEEEESSGGGCCC---SCEEEEECG-GGHHHHHHHHTTTTCSSCCH
T ss_pred HHHHcCCEEEEECCchhhhhcCCCCCCCCC-CCcEEEecCCcCCCCC---CeEEEEECH-HHHHHHhhhcCCcccCCccH
Confidence 478999999999996442 2345554 7999999999999875 468786654 566666543221 222222
Q ss_pred hHhHHHHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcC----CCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 74 PFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 74 p~da~ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~----p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
+.-+. +..++. .+..+.++..+|+..+.++|++. |++ .+..++ ..+.++.+++.
T Consensus 283 ~~~~a-~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~-~~~~~~---------------~~~~~~~~~~~ 345 (447)
T 3h7f_A 283 HVIAG-KAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGV-SVVSGG---------------TDVHLVLVDLR 345 (447)
T ss_dssp HHHHH-HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTC-EEGGGS---------------CSSSEEEEECT
T ss_pred HHHHH-HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCe-EEecCC---------------CCCCEEEEEcC
Confidence 21122 112222 45567788999999999999876 333 222111 12344555552
Q ss_pred ----CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec--------CCCHHHHHH
Q 027424 145 ----SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLIS 212 (223)
Q Consensus 145 ----~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--------lEd~~dL~~ 212 (223)
+.+.+.++++.-++.-... + .|.... ....++-+||+.. -|+.+.+++
T Consensus 346 ~~~~~~~~~~~~l~~~GI~v~~~------~---i~~~~~-----------~p~~~~~lRig~~~~~~~~~~~eei~~~~~ 405 (447)
T 3h7f_A 346 DSPLDGQAAEDLLHEVGITVNRN------A---VPNDPR-----------PPMVTSGLRIGTPALATRGFGDTEFTEVAD 405 (447)
T ss_dssp TSSCCHHHHHHHHHHTTEECBC---------------------------------CEEEEECHHHHHHTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCeEEecc------c---CCCCCC-----------CCCCCCceeccCHHHhhCCCCHHHHHHHHH
Confidence 3455666666655442110 0 111000 0012455999853 377888999
Q ss_pred HHHHHHhc
Q 027424 213 DLDKALRT 220 (223)
Q Consensus 213 dl~~Al~~ 220 (223)
-|+++|+.
T Consensus 406 ~l~~~l~~ 413 (447)
T 3h7f_A 406 IIATALAT 413 (447)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhc
Confidence 99888864
No 147
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=98.64 E-value=1.4e-06 Score=77.42 Aligned_cols=104 Identities=14% Similarity=0.123 Sum_probs=69.3
Q ss_pred CCEEEEecCCCCCCCcCcc--cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHHHhc
Q 027424 6 GALLLVDNSIMSPVLSRPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 83 (223)
Q Consensus 6 g~~lvVDnT~~s~~~~~pl--~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll~~~ 83 (223)
++++|+|+++..+. ..++ ..+.+|++.|+||+++..|..+|. +++.++++.+.+...+.....+.++.....+...
T Consensus 185 ~~~ii~De~y~~~~-~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~-~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~ 262 (391)
T 3bwn_A 185 EAKVIHDFAYYWPH-YTPITRRQDHDIMLFTFSKITGHAGSRIGW-ALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKI 262 (391)
T ss_dssp CCEEEEECTTCSTT-TSCCCCCBCCSEEEEEHHHHHSCGGGCEEE-EEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCC-CCccccCCCCeEEEEechhhcCCCccceEE-EEecCHHHHHHHHHHhcccccCCCHHHHHHHHHH
Confidence 39999999987321 1233 246789999999999877777765 4454567777776665543334566555555555
Q ss_pred HHHH-------------HHH-HHHHHhHHHHHHHHHhcCCCe
Q 027424 84 VKTM-------------ALR-VEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 84 l~tl-------------~~R-~~~~~~na~~la~~L~~~p~v 111 (223)
|+.- ..+ .++..++...+.+.|+++|.+
T Consensus 263 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 304 (391)
T 3bwn_A 263 LNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF 304 (391)
T ss_dssp HHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred HhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 5542 222 355567778888999988754
No 148
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=98.64 E-value=1.6e-06 Score=79.66 Aligned_cols=110 Identities=10% Similarity=0.066 Sum_probs=67.4
Q ss_pred CccccCCEEEEecCCCCCCCc-----Ccc-----cCC--C----cEEEecccccccC-CcccceeEEEec-ChhHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPL-----ELG--A----DIVMHSATKFIAG-HSDVMAGVLAVK-GERLAKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl-----~~G--A----Divv~S~tK~l~G-~~d~~~G~v~~~-~~~~~~~l~ 62 (223)
+|+++|+++++|++++...+. .++ ++| . .|+++|+||.+.| .+..+|++++.+ ++++.+.+.
T Consensus 265 la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 344 (500)
T 3tcm_A 265 FCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIY 344 (500)
T ss_dssp HHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHH
T ss_pred HHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHH
Confidence 378999999999998654321 121 121 2 2788999999943 344554444322 456767766
Q ss_pred HHHHhcCCCCChHhHHHHHhcH--------------HHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 63 FLQNAEGSGLAPFDCWICLRGV--------------KTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 63 ~~~~~~g~~~sp~da~ll~~~l--------------~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
...... .+.++...+.+...+ +.+..+.++..+++..+.+.|++.|++
T Consensus 345 ~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~ 406 (500)
T 3tcm_A 345 KIASVN-LCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGI 406 (500)
T ss_dssp HHHHTT-CCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred HHHhcc-cCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 555432 234444344433333 233445577788899999999998776
No 149
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=98.64 E-value=5.1e-07 Score=81.42 Aligned_cols=107 Identities=8% Similarity=-0.032 Sum_probs=70.2
Q ss_pred CccccCCEEEEecCCCCCCC------cCcc---cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL------SRPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~------~~pl---~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++|+|++++.... ...+ ..+.|+++.|++|+++..+..+| +++++++++.+.+.........+
T Consensus 229 l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG-~~~~~~~~l~~~l~~~~~~~~~~ 307 (447)
T 3b46_A 229 ICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIG-WVLSLNAELLSYAAKAHTRICFA 307 (447)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCE-EEECSCHHHHHHHHHHHHHHTSS
T ss_pred HHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhE-EEEeCCHHHHHHHHHHHhhccCC
Confidence 47899999999999864221 1112 24789999999999986676664 45553567777666544333334
Q ss_pred CChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcC
Q 027424 72 LAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~ 108 (223)
.++...+.+...|+.. ....++..++...+.+.|++.
T Consensus 308 ~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 350 (447)
T 3b46_A 308 SPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL 350 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5565555555666543 223456667777888888876
No 150
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=98.63 E-value=3.8e-08 Score=86.71 Aligned_cols=103 Identities=16% Similarity=0.190 Sum_probs=65.4
Q ss_pred CccccCCEEEEecCCCCCCCc-------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|++++ ++.. .....++|++ |++|++++ +..+|+ +++++ ++.+.+.........+.+
T Consensus 214 l~~~~~~~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-g~~~G~-~~~~~-~~~~~l~~~~~~~~~~~~ 287 (395)
T 1vef_A 214 ITQEKGALLILDEIQT-GMGRTGKRFAFEHFGIVPDIL--TLAKALGG-GVPLGV-AVMRE-EVARSMPKGGHGTTFGGN 287 (395)
T ss_dssp HHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEE--EECGGGGT-TSSCEE-EEEEH-HHHHTSCTTSSCCSSTTC
T ss_pred HHHHcCCEEEEEeccc-CCccCCchhHhhhcCCCCCEE--EEcccccC-CCceEE-EEehH-HHHhhhccCCcCCCcCCC
Confidence 4789999999999987 3321 1233468977 88999997 655655 44554 454443221111122356
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhcCC
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~~p 109 (223)
+..++.+...++.+.. ..++..+++..+.+.|++.+
T Consensus 288 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~ 325 (395)
T 1vef_A 288 PLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIP 325 (395)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Confidence 7777777777776643 34666777788888887754
No 151
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=98.63 E-value=2.3e-07 Score=81.15 Aligned_cols=103 Identities=11% Similarity=0.088 Sum_probs=67.7
Q ss_pred ccccCCEEEEecCCCCCCC-cCccc----CC-CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChH
Q 027424 2 AHAHGALLLVDNSIMSPVL-SRPLE----LG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 75 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~-~~pl~----~G-ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~ 75 (223)
++.+++++|+|++++.... ..++. .+ .++++.|++|.++..+..+ |++++++ ++.+.+....... +.++.
T Consensus 190 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~-~~~~~l~~~~~~~--~~~~~ 265 (369)
T 3cq5_A 190 INVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRL-GYFVANP-AFIDAVMLVRLPY--HLSAL 265 (369)
T ss_dssp HHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCC-EEEEECT-HHHHHHHTTSCTT--CSCHH
T ss_pred HHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccce-EEEEeCH-HHHHHHHHcCCCC--CCCHH
Confidence 5677899999999854332 22232 24 5699999999997666555 5565654 5655554332222 35676
Q ss_pred hHHHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcC
Q 027424 76 DCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 76 da~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~ 108 (223)
..+.+...++. +..+.++..++...+.+.|++.
T Consensus 266 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 301 (369)
T 3cq5_A 266 SQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL 301 (369)
T ss_dssp HHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 66666666653 4455677788888899999873
No 152
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=98.62 E-value=2.7e-07 Score=82.89 Aligned_cols=108 Identities=18% Similarity=0.088 Sum_probs=72.6
Q ss_pred CccccCCEEEEecCCCCCCCcCcccCC--CcEEEeccc--ccccCCcccceeEEEecChhHHHHHHHHHHh---------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------- 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~G--ADivv~S~t--K~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~--------- 67 (223)
+|+++|+++++|++++.+...+.-.+| +|+++.|++ |.++| ..+|+++.+++.+.+.+...+..
T Consensus 180 l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~s~~~~k~l~~---g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (437)
T 3bb8_A 180 VADKYNLWLIEDCCDALGSTYDGKMAGTFGDIGTVSFYPAKHITM---GEGGAVFTQSAELKSIIESFRDWGRDCYCAPG 256 (437)
T ss_dssp HHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECSTTSSSCC---SSCEEEEESCHHHHHHHHHHHBTTBCC-----
T ss_pred HHHHcCCEEEEECccccCceECCeecccccCEEEEECcCCcCCCC---CCeEEEEeCCHHHHHHHHHHHHhCcccccccc
Confidence 478899999999998755433333356 899999864 44543 24788887765554433322110
Q ss_pred ----------------------------cCC--CCChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 68 ----------------------------EGS--GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 68 ----------------------------~g~--~~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
.|. .+++..+.+.+..++.+..++++..+++..+.+.|++.|.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~ 330 (437)
T 3bb8_A 257 CDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADF 330 (437)
T ss_dssp -----------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTT
T ss_pred cccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 010 13465666667778888888888899999999999988765
No 153
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=98.62 E-value=5.8e-08 Score=87.03 Aligned_cols=169 Identities=12% Similarity=0.200 Sum_probs=98.2
Q ss_pred CccccCCEEEEecCCCCCCCc-------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++. ++.. .......|++ |++|.+++ +..+|+ +++++ ++.+.+...........+
T Consensus 230 l~~~~gi~lI~Dev~~-g~~~~g~~~~~~~~~~~~dii--t~sK~l~~-G~~iG~-~~~~~-~l~~~l~~~~~~~t~~~~ 303 (420)
T 2pb2_A 230 LCDEHQALLVFDEVQC-GMGRTGDLFAYMHYGVTPDIL--TSAKALGG-GFPVSA-MLTTQ-EIASAFHVGSHGSTYGGN 303 (420)
T ss_dssp HHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSCCEE-EEECH-HHHTTCC----CCEECCC
T ss_pred HHHHcCCEEEEEcCCc-CcccCCcHHHHHhcCCCCCeE--EecccccC-CCceEE-EEEhH-HHHHhhcCCCcCcccCcC
Confidence 4789999999999984 4321 1223457887 68999995 555555 54554 454444321111122457
Q ss_pred hHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhcC----CCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHH
Q 027424 74 PFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 147 (223)
Q Consensus 74 p~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~~----p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~ 147 (223)
|..+......|+.+. ...++..++...+.+.|++. |.+..+ ++.|.++.|++....
T Consensus 304 ~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~v~~~~~~ 365 (420)
T 2pb2_A 304 PLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI------------------RGMGLLIGAELKPKY 365 (420)
T ss_dssp HHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE------------------EEETTEEEEEECGGG
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EecceEEEEEECCCc
Confidence 877777777887763 33466666677777766653 433221 235788899884321
Q ss_pred --HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEe----cCCCHHHHHHHHHHHHhc
Q 027424 148 --LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRT 220 (223)
Q Consensus 148 --~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsv----GlEd~~dL~~dl~~Al~~ 220 (223)
...+|.+.+.--.+ +..|. .++.+|||. .-|+.+++++.|+++++.
T Consensus 366 ~~~~~~l~~~l~~~Gi----------~v~~~-----------------~~~~iRl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 366 KGRARDFLYAGAEAGV----------MVLNA-----------------GADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp TTCHHHHHHHHHHTTE----------ECEES-----------------STTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCC----------EEEeC-----------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 23444444321111 01111 146799994 356788888888888764
No 154
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=98.62 E-value=5.3e-07 Score=79.84 Aligned_cols=110 Identities=9% Similarity=-0.004 Sum_probs=68.8
Q ss_pred CccccCCEEEEecCCCCCCC--------cCcc-cC---CCcEEEecccccccCCcccceeEEEecCh-hHHHHH----HH
Q 027424 1 MAHAHGALLLVDNSIMSPVL--------SRPL-EL---GADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKEL----YF 63 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~--------~~pl-~~---GADivv~S~tK~l~G~~d~~~G~v~~~~~-~~~~~l----~~ 63 (223)
+|+++|++||+|++++.... ..++ .+ +-++++.|++|.+++.+..+|. ++++++ ++.+.+ +.
T Consensus 205 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~-~~~~~~~~~~~~~~~~~~~ 283 (416)
T 1bw0_A 205 LAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGW-LLYVDPHGNGPSFLEGLKR 283 (416)
T ss_dssp HHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEE-EEEECTTCSCHHHHHHHHH
T ss_pred HHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEE-EEeeCchhhHHHHHHHHHH
Confidence 37889999999999864211 1122 11 2258899999998877766655 545554 232222 22
Q ss_pred HHHhcCCCCChHhHHHHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCCCee
Q 027424 64 LQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVK 112 (223)
Q Consensus 64 ~~~~~g~~~sp~da~ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p~v~ 112 (223)
..... .+.++...+.+...|+ .+..+.++..++...+.+.|++.|.+.
T Consensus 284 ~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 336 (416)
T 1bw0_A 284 VGMLV-CGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLA 336 (416)
T ss_dssp HHHHH-TCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEE
T ss_pred Hhccc-cCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 21112 2456766666666665 245556778888999999999887763
No 155
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=98.62 E-value=1.1e-06 Score=77.22 Aligned_cols=106 Identities=13% Similarity=0.115 Sum_probs=68.0
Q ss_pred CccccCCEEEEecCCCCCCC----cCcccC--CCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~~--GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|++||+|++++.... .....+ +.+|++.|++|.++.+|..+|. +++ ++++.+.+...+.......++
T Consensus 192 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~-~~~-~~~~~~~l~~~~~~~~~~~~~ 269 (385)
T 1b5p_A 192 LAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY-ACG-PKEVIKAMASVSRQSTTSPDT 269 (385)
T ss_dssp HHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEE-EEC-CHHHHHHHHHHHHTTTCSCCH
T ss_pred HHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEE-EEe-CHHHHHHHHHHHhhccCCCCH
Confidence 36889999999999864322 111223 5689999999999877767655 544 456767766555443334555
Q ss_pred HhHHHHHhcHH-------HHHHHHHHHHhHHHHHHHHHhcC
Q 027424 75 FDCWICLRGVK-------TMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 75 ~da~ll~~~l~-------tl~~R~~~~~~na~~la~~L~~~ 108 (223)
...+.+...++ .+....++..++...+.+.|+++
T Consensus 270 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T 1b5p_A 270 IAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310 (385)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 54544444443 23334466667777788888875
No 156
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=98.62 E-value=1.7e-07 Score=82.16 Aligned_cols=177 Identities=14% Similarity=0.134 Sum_probs=97.1
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH--------------H
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--------------Q 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~--------------~ 65 (223)
+|+++|+++|+|++++-+.. ...-.+|+|+++.|.+|+++|...+ |+++.++ ++.+.+... +
T Consensus 168 l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~--g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 244 (396)
T 2ch1_A 168 ICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGI--TPISISP-KALDVIRNRRTKSKVFYWDLLLLG 244 (396)
T ss_dssp HHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSC--EEEEECH-HHHHHHHTCSSCCSCGGGCHHHHH
T ss_pred HHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCe--EEEEECH-HHHHhhhhccCcccceEechHHHH
Confidence 47889999999999862211 1122357899999999998876433 6676654 454444210 1
Q ss_pred HhcC---------CCCChHhHHHHHhcHHH-----HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhh
Q 027424 66 NAEG---------SGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 131 (223)
Q Consensus 66 ~~~g---------~~~sp~da~ll~~~l~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~ 131 (223)
...+ .+.+....+.+...++. +..+.++..+++..+.+.|++. ++ ++.-| ...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~----~~~------- 311 (396)
T 2ch1_A 245 NYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GL-DIFVK----DPR------- 311 (396)
T ss_dssp HHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TC-CBSSC----SGG-------
T ss_pred HhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CC-eeccC----Ccc-------
Confidence 1111 12233333333444444 3345677788888888888876 33 22212 100
Q ss_pred hCCCCeeEEEEeC---CHHHH-HHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEe-cC--
Q 027424 132 AKGAGSVLSFLTG---SLALS-KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-GI-- 204 (223)
Q Consensus 132 ~~g~ggl~sf~~~---~~~~~-~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsv-Gl-- 204 (223)
...+.++.|.+. +.+.. +++.+.-++. +.-|. .+ ..++.+|||+ |.
T Consensus 312 -~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~---v~~g~------~~-----------------~~~~~iRi~~~~~~~ 364 (396)
T 2ch1_A 312 -HRLPTVTGIMIPKGVDWWKVSQYAMNNFSLE---VQGGL------GP-----------------TFGKAWRVGIMGECS 364 (396)
T ss_dssp -GBCTTEEEEECCTTCCHHHHHHHHHHHHCBC---CBCCC------GG-----------------GTTTEEEEECCGGGC
T ss_pred -ccCCceEEEEcCCCCCHHHHHHHHHHhCCEE---EecCc------cc-----------------cCCCEEEEECCCCcC
Confidence 014568888873 22222 2222322332 11111 00 1357899999 73
Q ss_pred --CCHHHHHHHHHHHHhc
Q 027424 205 --EDVNDLISDLDKALRT 220 (223)
Q Consensus 205 --Ed~~dL~~dl~~Al~~ 220 (223)
||.+.+++.|++++++
T Consensus 365 ~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 365 TVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 4578888888888763
No 157
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=98.62 E-value=1.4e-07 Score=87.33 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=72.8
Q ss_pred CccccCCEEEEecCCCCCCCcCc-----cc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-HHhc----
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP-----LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNAE---- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p-----l~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-~~~~---- 68 (223)
+|+++|++++||.+++.+....| +. .+||+++.|.||+++++- .+|+++++++.+....... ..++
T Consensus 273 ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~--g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 350 (511)
T 3vp6_A 273 ICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLL--QCSAILVKEKGILQGCNQMHASYLFQQD 350 (511)
T ss_dssp HHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESSTTHHHHHHCCCCTTTCCSS
T ss_pred HHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCc--CeEEEEEeCHHHHHHHhccCCccccCcc
Confidence 48899999999999987654322 11 368999999999998763 3466667766543332110 0010
Q ss_pred ----------------CCCCChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCee
Q 027424 69 ----------------GSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVK 112 (223)
Q Consensus 69 ----------------g~~~sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~ 112 (223)
+........|..++ +.+.+..++++..+++..++++|++.|.++
T Consensus 351 ~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~ 412 (511)
T 3vp6_A 351 KHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFE 412 (511)
T ss_dssp CSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEE
T ss_pred cccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 00011233444444 445678889999999999999999999874
No 158
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=98.61 E-value=2.2e-07 Score=82.07 Aligned_cols=174 Identities=15% Similarity=0.098 Sum_probs=98.3
Q ss_pred CccccCCEEEEecCCCCCCCcCcc-cCCCcEEEeccccccc-CCcccceeEEEecChhHHHHHHHH--------------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPL-ELGADIVMHSATKFIA-GHSDVMAGVLAVKGERLAKELYFL-------------- 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl-~~GADivv~S~tK~l~-G~~d~~~G~v~~~~~~~~~~l~~~-------------- 64 (223)
+|+++|+++|+|++++.+...-++ .+|+|+++.|++|++. |.+- + |+++++++ +.+++...
T Consensus 190 l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~-~-g~l~~~~~-~~~~l~~~~~g~~g~~~~~~~~ 266 (416)
T 1qz9_A 190 LSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGS-Q-AFVWVSPQ-LCDLVPQPLSGWFGHSRQFAME 266 (416)
T ss_dssp HHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTC-C-CEEEECTT-TTTTSCCSCCCGGGBCTTSCCC
T ss_pred HHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCC-e-EEEEECHH-HHhccCCCccccCccccccCCC
Confidence 478999999999998744321122 3589999999999985 4431 2 66766654 33332211
Q ss_pred ---------HHhcCCCCChHhHHHHHhcHHHH-----HHHHHHHHhHHHHHHHHHhcC-C--CeeEEEcCCCCCCcchHH
Q 027424 65 ---------QNAEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASH-P--RVKKVNYAGLPEHPGHEL 127 (223)
Q Consensus 65 ---------~~~~g~~~sp~da~ll~~~l~tl-----~~R~~~~~~na~~la~~L~~~-p--~v~~V~yP~l~~~~~~~~ 127 (223)
......+.++.....+...++.+ ....++..+++..+.+.|++. | ++ ++..|.- +
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~-~~~~~~~---~---- 338 (416)
T 1qz9_A 267 PRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHEL-TLVTPRE---H---- 338 (416)
T ss_dssp SSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EECSCSS---G----
T ss_pred CccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCe-EEeCCCC---H----
Confidence 01111133444444444555544 334577778888888888875 5 44 3333310 0
Q ss_pred HHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----
Q 027424 128 HYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---- 203 (223)
Q Consensus 128 ~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG---- 203 (223)
...++++.|.+.+.+...+.+..-++. + .+ ..++.+|||++
T Consensus 339 -----~~~~~~~~~~~~~~~~l~~~l~~~gi~---~----------~~-----------------~~~~~lRis~~~~~~ 383 (416)
T 1qz9_A 339 -----AKRGSHVSFEHPEGYAVIQALIDRGVI---G----------DY-----------------REPRIMRFGFTPLYT 383 (416)
T ss_dssp -----GGBCSEEEEECTTHHHHHHHHHTTTEE---C----------EE-----------------ETTTEEEEECCTTTC
T ss_pred -----HHcCCEEEEecCCHHHHHHHHHhCCcE---e----------cc-----------------CCCCeEEEeCcccCC
Confidence 013578888885432222222222222 0 00 03578999997
Q ss_pred -CCCHHHHHHHHHHHHhc
Q 027424 204 -IEDVNDLISDLDKALRT 220 (223)
Q Consensus 204 -lEd~~dL~~dl~~Al~~ 220 (223)
-||.+.+++-|+++++.
T Consensus 384 t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 384 TFTEVWDAVQILGEILDR 401 (416)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 34567777777777764
No 159
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=98.60 E-value=8.7e-07 Score=77.04 Aligned_cols=174 Identities=14% Similarity=0.086 Sum_probs=95.3
Q ss_pred CccccCCEEEEecCCCCCCC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-------------HH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------------QN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-------------~~ 66 (223)
+|+++|+++|+|++.+.... ...-++|+|+++.|++|+++|... .|+++.+ +++.+++... ..
T Consensus 169 l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
T 3f0h_A 169 FCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPG--ISVIVLA-PRGVERVEKSKVRTMYFDLKDALKN 245 (376)
T ss_dssp HHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSS--CEEEEEC-HHHHHHHHTCCCCCSTTCHHHHHHH
T ss_pred HHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCc--eEEEEEC-HHHHHHhhcCCCCceeecHHHHHhh
Confidence 47899999999998754332 122235899999999999994432 3556554 4555544310 00
Q ss_pred --hcC--CCCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCC
Q 027424 67 --AEG--SGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 136 (223)
Q Consensus 67 --~~g--~~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g 136 (223)
..+ .+.+....+.+..+++.+ ..+.++..+++..+.+.|++.+ + .+..| ...+
T Consensus 246 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~-~~~~~---------------~~~~ 308 (376)
T 3f0h_A 246 QERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLP-F-ELVSE---------------SPAN 308 (376)
T ss_dssp HTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSS-E-EECCS---------------SBBT
T ss_pred cccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-ccCcc---------------ccCc
Confidence 001 112222223344455433 3345666777788888888765 2 23221 0134
Q ss_pred eeEEEEeC--CHHH-HHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHH
Q 027424 137 SVLSFLTG--SLAL-SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVND 209 (223)
Q Consensus 137 gl~sf~~~--~~~~-~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~d 209 (223)
+++.+... +.+. .+++.++.++. ..+..| + ..++.+|||++. |+.+.
T Consensus 309 ~~~~~~~~~~~~~~l~~~l~~~~gi~-v~~g~~--------~-----------------~~~~~lRis~~~~~t~e~i~~ 362 (376)
T 3f0h_A 309 GVTSVHPTTANAYDIFLKLKDEYGIW-ICPNGG--------E-----------------MKDTIFRVGHIGALTHEDNTT 362 (376)
T ss_dssp TEEEEEESSSCHHHHHHHHHHHSSEE-CEECCG--------G-----------------GTTTCEEEECCSSCCHHHHHH
T ss_pred eEEEEeCCCCCHHHHHHHHHHhCCEE-EecCcc--------c-----------------cCCCEEEEecCCCCCHHHHHH
Confidence 55666542 2233 33333332443 111110 0 134679999985 56777
Q ss_pred HHHHHHHHHhc
Q 027424 210 LISDLDKALRT 220 (223)
Q Consensus 210 L~~dl~~Al~~ 220 (223)
+++-|+++++.
T Consensus 363 ~~~~l~~~l~~ 373 (376)
T 3f0h_A 363 LVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 88888888764
No 160
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=98.60 E-value=4.8e-07 Score=80.93 Aligned_cols=107 Identities=14% Similarity=0.054 Sum_probs=65.3
Q ss_pred CccccCCEEEEecCCCCCCC------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|++++.++. ..+...+.++++.|++|. .+.+..+ |+++. ++++.+.+.......+...++
T Consensus 234 ~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~-G~~~~-~~~l~~~~~~~~~~~~~~~~~ 310 (444)
T 3if2_A 234 IAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPGMRT-GIIVA-DAKVIEAVSAMNAVVNLAPTR 310 (444)
T ss_dssp HHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGGGCC-EEEEC-CHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc-cCCCCce-EEEEE-CHHHHHHHHHHHHhccCCCCh
Confidence 47899999999999875321 112224678999999997 5555554 45544 566777776655544444566
Q ss_pred HhHHHHHhcHHHH--H---H--HHHHHHhHHHHHHHHHhc-CCC
Q 027424 75 FDCWICLRGVKTM--A---L--RVEKQQDNAQKIAEFLAS-HPR 110 (223)
Q Consensus 75 ~da~ll~~~l~tl--~---~--R~~~~~~na~~la~~L~~-~p~ 110 (223)
.....+...++.. . . ..+...++...+.+.|++ .|.
T Consensus 311 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 354 (444)
T 3if2_A 311 FGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGD 354 (444)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5555555555431 1 1 123445566667777765 344
No 161
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.60 E-value=6e-07 Score=79.53 Aligned_cols=109 Identities=11% Similarity=0.105 Sum_probs=68.8
Q ss_pred CccccCCEEEEecCCCCCCCcC------cc----cCCC-cEEEecccccccCCcccceeEE-EecChh----HHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR------PL----ELGA-DIVMHSATKFIAGHSDVMAGVL-AVKGER----LAKELYFL 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~------pl----~~GA-Divv~S~tK~l~G~~d~~~G~v-~~~~~~----~~~~l~~~ 64 (223)
+|+++|+++|+|++++...... ++ ..+. .|++.|++|+++.+|..+|.++ ++.+++ +.+.+...
T Consensus 211 ~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~ 290 (409)
T 4eu1_A 211 VIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALL 290 (409)
T ss_dssp HHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred HHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHH
Confidence 3789999999999986432211 11 2222 3789999999988888887752 345555 44445444
Q ss_pred HHhcCCCCChHhHHHHHhcHHH----------HHHHHHHHHhHHHHHHHHHhcCC
Q 027424 65 QNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 65 ~~~~g~~~sp~da~ll~~~l~t----------l~~R~~~~~~na~~la~~L~~~p 109 (223)
......+.++...+.+...++. +..+.++..++...+.+.|++.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 345 (409)
T 4eu1_A 291 IRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACG 345 (409)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333334456666666555543 33445677778888888888764
No 162
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=98.60 E-value=4.7e-07 Score=83.46 Aligned_cols=110 Identities=18% Similarity=0.216 Sum_probs=70.6
Q ss_pred CccccCCEEEEecCCCCCCCcCc-----cc--CCCcEEEecccccccCCcccceeEEEecCh-hHHHHHHH-HHHhc-CC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP-----LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKELYF-LQNAE-GS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p-----l~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~-~~~~~l~~-~~~~~-g~ 70 (223)
+||++|++++||++++.+....+ +. .++|+++-|.||+++++.+ .|+++++++ .+.++... ...+. +.
T Consensus 284 la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g--~G~l~~~~~~~~~~~~~~~~~~yl~~~ 361 (515)
T 2jis_A 284 VCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQ--CSALLLQDTSNLLKRCHGSQASYLFQQ 361 (515)
T ss_dssp HHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESCCSCHHHHHHCC--------
T ss_pred HHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCC--eeEEEEeChHHHHHHHhcCCchhccCC
Confidence 47899999999999876654332 33 2799999999999987642 466777765 44333110 00000 00
Q ss_pred -------------------CCChHhHHHHHhcH--HHHHHHHHHHHhHHHHHHHHHhcCCCee
Q 027424 71 -------------------GLAPFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVK 112 (223)
Q Consensus 71 -------------------~~sp~da~ll~~~l--~tl~~R~~~~~~na~~la~~L~~~p~v~ 112 (223)
-......|.+++.+ +.+...+++..+++..+++.|++.|.++
T Consensus 362 ~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 424 (515)
T 2jis_A 362 DKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFE 424 (515)
T ss_dssp -CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred cccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 01123344444444 3356677888999999999999988863
No 163
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=98.59 E-value=1.1e-06 Score=78.31 Aligned_cols=107 Identities=12% Similarity=0.087 Sum_probs=67.7
Q ss_pred CccccCCEEEEecCCCCCCC----cCccc----CCCcEEEecccccccCCcccceeEEEecChh-------HHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGER-------LAKELYFLQ 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~-------~~~~l~~~~ 65 (223)
+|+++|++||+|++++.... ..... .+.+|++.|++|.++..+..+| +++++++. +.+.+....
T Consensus 226 la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G-~~~~~~~~~~~~~~~~~~~~~~~~ 304 (432)
T 3ei9_A 226 FAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLG-WTVIPKKLLYSDGFPVAKDFNRII 304 (432)
T ss_dssp HHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCE-EEECCTTCBCTTSCBHHHHHHHHH
T ss_pred HHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceE-EEEEChHHhhcchHHHHHHHHHHh
Confidence 37899999999999863211 11111 2456999999999986666665 45555543 145555444
Q ss_pred HhcCCCCChHhHHHHHhcH-----HHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 66 NAEGSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l-----~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
.....+.++.........+ +.+..+.++..++...+.+.|+++
T Consensus 305 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 352 (432)
T 3ei9_A 305 CTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL 352 (432)
T ss_dssp HHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4433345665443333332 335566678888999999999887
No 164
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=98.59 E-value=1.5e-06 Score=76.72 Aligned_cols=104 Identities=13% Similarity=0.090 Sum_probs=66.6
Q ss_pred CccccCCEEEEecCCCCCCC------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|+++|+|++++.++. ..|...+.++++.|++|+ ++.+..+| +++. ++++.+.+.......+...++
T Consensus 208 ~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G-~~~~-~~~~~~~~~~~~~~~~~~~~~ 284 (417)
T 3g7q_A 208 LANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSKL-GLPGSRCG-IIIA-NDKTITAIANMNGIISLAPGG 284 (417)
T ss_dssp HHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGGG-TCTTSCCE-EEEC-CHHHHHHHHHHHHHHCCCCCS
T ss_pred HHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechhc-cCCCcceE-EEEe-CHHHHHHHHHhhcceeeCCCc
Confidence 47899999999999975321 223335778999999994 66666665 4544 567777777665555555666
Q ss_pred HhHHHHHhcHHHH--H---H--HHHHHHhHHHHHHHHHhc
Q 027424 75 FDCWICLRGVKTM--A---L--RVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 75 ~da~ll~~~l~tl--~---~--R~~~~~~na~~la~~L~~ 107 (223)
.....+...++.. . . ..++..++...+.+.|++
T Consensus 285 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (417)
T 3g7q_A 285 MGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRR 324 (417)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655555431 1 1 123345566667777766
No 165
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=98.58 E-value=6.3e-08 Score=88.00 Aligned_cols=105 Identities=14% Similarity=0.180 Sum_probs=67.8
Q ss_pred CccccCCEEEEecCCCCCCC-cCcc-----cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC-C
Q 027424 1 MAHAHGALLLVDNSIMSPVL-SRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL-A 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-~~pl-----~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~-s 73 (223)
+||++|++++||++++.... ..|. ..++|+++.|.||++.|+ .-+|+++++++++.+.+. ....|... .
T Consensus 256 la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~~p--~g~G~l~~~~~~~~~~l~--~~~~g~~~~~ 331 (456)
T 2z67_A 256 ICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTP--IGGGLVYSTDAEFIKEIS--LSYPGRASAT 331 (456)
T ss_dssp HHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCC--SSCEEEEESCHHHHHHHH--TTSCSCBCSH
T ss_pred HHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcCCC--CCeEEEEEcCHHHHhhcC--cCCCCCCCCC
Confidence 47899999999999875432 2222 228999999999998765 235777776666655542 22334321 2
Q ss_pred h-HhHHHHHhcH--HHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 74 P-FDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 74 p-~da~ll~~~l--~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
| ...+..+..+ +.+..+.++..+++..+.+.|++.|
T Consensus 332 ~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~ 370 (456)
T 2z67_A 332 PVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLS 370 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2 2233333322 3355667888899999999998875
No 166
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=98.58 E-value=1.8e-07 Score=81.44 Aligned_cols=104 Identities=13% Similarity=0.192 Sum_probs=66.4
Q ss_pred CccccCCEEEEecCCCCCCCcC----cc-cCC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----PL-ELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----pl-~~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|++++. +... ++ .+| +|++ |++|.+++ +..+|+ +++++ ++.+.+...........+
T Consensus 201 ~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~d~~--s~SK~~~~-g~~~G~-~~~~~-~~~~~~~~~~~~~~~~~~ 274 (375)
T 2eh6_A 201 ICKEKDVLLIIDEVQTG-IGRTGEFYAYQHFNLKPDVI--ALAKGLGG-GVPIGA-ILARE-EVAQSFTPGSHGSTFGGN 274 (375)
T ss_dssp HHHHHTCEEEEECTTTT-TTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSCCEE-EEEEH-HHHTTCCTTSCCCSSTTC
T ss_pred HHHHhCCEEEEeccccC-CCCCCcchhhhhcCCCCCEE--EEcccccC-CCCeEE-EEEcH-HHHhhhcCCCCCCCCCCC
Confidence 47899999999999873 3211 12 346 8988 56699986 555555 54554 454443321111122346
Q ss_pred hHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCC
Q 027424 74 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 74 p~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~ 110 (223)
+.....+...|+.+....++..+++..+.+.|++.+.
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~ 311 (375)
T 2eh6_A 275 PLACRAGTVVVDEVEKLLPHVREVGNYFKEKLKELGK 311 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777777777777765567777888888888887653
No 167
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=98.56 E-value=1e-07 Score=83.92 Aligned_cols=174 Identities=15% Similarity=0.221 Sum_probs=97.7
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|++||+|++++.. +.........|++ |++|.+++ +..+ |+++.+ +++.+.+.........+.+|
T Consensus 212 l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~~-G~r~-G~~~~~-~~~~~~~~~~~~~~~~~~~~ 286 (406)
T 4adb_A 212 LCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALGG-GFPV-GALLAT-EECARVMTVGTHGTTYGGNP 286 (406)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSCC-EEEEEC-HHHHHTCCTTSSCCSSTTCH
T ss_pred HHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--EechhhcC-CCCe-EEEEEc-HHHHhhhccCCcCCCCCCCH
Confidence 478999999999998521 1112233456877 67999994 5444 556554 45555443222222334677
Q ss_pred HhHHHHHhcHHHH--HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH--HHHH
Q 027424 75 FDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSK 150 (223)
Q Consensus 75 ~da~ll~~~l~tl--~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~--~~~~ 150 (223)
..+..+...++.+ ....++..++...+.+.|++... .|+... ...+.|.++.|++.+. ....
T Consensus 287 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~ 352 (406)
T 4adb_A 287 LASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINH----RYGLFS----------EVRGLGLLIGCVLNADYAGQAK 352 (406)
T ss_dssp HHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHH----HHCCEE----------EEEEETTEEEEEECTTTTTCHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----hCCCce----------EEEEEEEEEEEEEeCCcHHHHH
Confidence 7777777777765 44456667777777777765421 011000 0134678899988431 1223
Q ss_pred HHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 151 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 151 ~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
+|.+.+.--.+.+.-| .++.+|++.+. |+.+.+++.|+++++.
T Consensus 353 ~~~~~l~~~gi~v~~~---------------------------~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~ 399 (406)
T 4adb_A 353 QISQEAAKAGVMVLIA---------------------------GGNVVRFAPALNVSEEEVTTGLDRFAAACEH 399 (406)
T ss_dssp HHHHHHHHTTEECEES---------------------------STTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEeec---------------------------CCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 3333332111111111 15679996553 4567777778777753
No 168
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=98.55 E-value=5.5e-07 Score=77.64 Aligned_cols=102 Identities=7% Similarity=0.048 Sum_probs=66.3
Q ss_pred ccccCCEEEEecCCCCCCCcCcc----cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhH
Q 027424 2 AHAHGALLLVDNSIMSPVLSRPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 77 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~~pl----~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da 77 (223)
++.+| ++|+|++++......++ ..+.++++.|++|.++..+..+ |++++ ++++.+.+...... .+.++...
T Consensus 164 ~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~-G~~~~-~~~~~~~l~~~~~~--~~~~~~~~ 238 (335)
T 1uu1_A 164 LKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRV-GYVVA-SEKFIDAYNRVRLP--FNVSYVSQ 238 (335)
T ss_dssp HHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCC-EEEEE-CHHHHHHHHHHSCT--TCSCHHHH
T ss_pred HHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCe-EEEEe-CHHHHHHHHHhcCC--CCcCHHHH
Confidence 34558 89999998521111112 2357899999999997556555 45555 45666666544322 24667666
Q ss_pred HHHHhcHHH---HHHHHHHHHhHHHHHHHHHhcC
Q 027424 78 WICLRGVKT---MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 78 ~ll~~~l~t---l~~R~~~~~~na~~la~~L~~~ 108 (223)
+.+.+.++. +..+.++..++...+.+.|+++
T Consensus 239 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 272 (335)
T 1uu1_A 239 MFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 666666654 4455677788888899999876
No 169
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=98.55 E-value=2.5e-07 Score=82.07 Aligned_cols=101 Identities=19% Similarity=0.220 Sum_probs=59.9
Q ss_pred CccccCCEEEEecCCCCCCCc-------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|++||+|++++ .+.. ......+|++ |++|.+++ +..+| ++++++ ++.+.+...........+
T Consensus 228 l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-GlriG-~~~~~~-~~~~~l~~~~~~~~~~~~ 301 (426)
T 1sff_A 228 LCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-GFPLA-GVTGRA-EVMDAVAPGGLGGTYAGN 301 (426)
T ss_dssp HHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEE--EECGGGGT-SSCCE-EEEEEH-HHHTTSCTTSBCCSSSSC
T ss_pred HHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEE--EEcccccC-CCceE-EEEEcH-HHHhhhccCCcCcCCCCC
Confidence 4789999999999986 3321 1122236765 88999997 65564 455554 454443211111122346
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~ 107 (223)
|.....+...|+.+.. ..++..++...+.+.|+.
T Consensus 302 ~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~ 337 (426)
T 1sff_A 302 PIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLA 337 (426)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 7666667767766532 345556666666666654
No 170
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=98.54 E-value=4.5e-07 Score=81.99 Aligned_cols=179 Identities=11% Similarity=0.054 Sum_probs=100.1
Q ss_pred CccccCCEEEEecCCCCCCCcC------cc----cCCCc-EEEecccccccCCcccceeEE-Ee--------cCh----h
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR------PL----ELGAD-IVMHSATKFIAGHSDVMAGVL-AV--------KGE----R 56 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~------pl----~~GAD-ivv~S~tK~l~G~~d~~~G~v-~~--------~~~----~ 56 (223)
+|+++|+++++|+++.....-. ++ ..+.+ |++.|+||.++..|..+|++. ++ .++ .
T Consensus 230 l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~ 309 (448)
T 3meb_A 230 IMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAA 309 (448)
T ss_dssp HHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHH
T ss_pred HHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHH
Confidence 4788999999999985432111 11 22444 779999999998888887762 33 233 3
Q ss_pred HHHHHHHHHHhcCCCCChHhHHHHHhcHHH----------HHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchH
Q 027424 57 LAKELYFLQNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 126 (223)
Q Consensus 57 ~~~~l~~~~~~~g~~~sp~da~ll~~~l~t----------l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~ 126 (223)
+.+.+....+......+....+.+...|+. +....++..++...+.+.|++.. .|+........
T Consensus 310 l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~------~~~~~~~~~~~ 383 (448)
T 3meb_A 310 MVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRK------TPGPGSKGTWD 383 (448)
T ss_dssp HHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------CCCSTTTCCCT
T ss_pred HHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC------CCCcCcccccc
Confidence 444444433333333444544444444332 33344666777778888888762 12200000001
Q ss_pred HHHhhhCCCCeeEEEEeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC--
Q 027424 127 LHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-- 204 (223)
Q Consensus 127 ~~~~~~~g~ggl~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-- 204 (223)
... ..+|+++|.--+.+.+.++++.-++.- + |.+ .|||++-
T Consensus 384 ~~~----~~~g~~~~~~~~~~~~~~ll~~~gV~v---~----------~G~--------------------gRis~a~~~ 426 (448)
T 3meb_A 384 HIL----TAIGMFTFTGLTPEHVDYLKEKWSIYL---V----------KAG--------------------GRMSMCGLT 426 (448)
T ss_dssp HHH----HCCSSEEECCCCHHHHHHHHHHHCEEE---C----------SGG--------------------GEEEGGGCC
T ss_pred eeC----CCceEEEecCCCHHHHHHHHHhCCEEE---e----------CCC--------------------cEEEEecCC
Confidence 111 146777764324455566555544431 1 110 2999875
Q ss_pred -CCHHHHHHHHHHHHhcCC
Q 027424 205 -EDVNDLISDLDKALRTGP 222 (223)
Q Consensus 205 -Ed~~dL~~dl~~Al~~~~ 222 (223)
|+.+.+++-|.+++++.+
T Consensus 427 ~~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 427 ESNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp TTTHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 568888888888887544
No 171
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=98.54 E-value=5.5e-07 Score=79.72 Aligned_cols=109 Identities=11% Similarity=0.054 Sum_probs=65.8
Q ss_pred CccccCCEEEEecCCCCCCCc------Ccc-c---CCC----cEEEecccccccCCcccceeEEE-e----cChh----H
Q 027424 1 MAHAHGALLLVDNSIMSPVLS------RPL-E---LGA----DIVMHSATKFIAGHSDVMAGVLA-V----KGER----L 57 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~------~pl-~---~GA----Divv~S~tK~l~G~~d~~~G~v~-~----~~~~----~ 57 (223)
+|+++|+++|+|++++....- .|+ . .+. +|++.|++|.++.+|..+|.+++ + ++++ +
T Consensus 204 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l 283 (412)
T 1yaa_A 204 AIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAV 283 (412)
T ss_dssp HHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHH
T ss_pred HHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHH
Confidence 378999999999998533221 123 1 244 58899999999877877766541 4 1344 5
Q ss_pred HHHHHHHHHhcCCCCChHhHHHHHhcHHH----------HHHHHHHHHhHHHHHHHHHhcCC
Q 027424 58 AKELYFLQNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 58 ~~~l~~~~~~~g~~~sp~da~ll~~~l~t----------l~~R~~~~~~na~~la~~L~~~p 109 (223)
.+.+.........+.++...+.+.+.|+. +....++..++...+.+.|++++
T Consensus 284 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 284 TSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp HHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 55554433332223455555555555543 22334566667778888887754
No 172
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=98.52 E-value=8.3e-07 Score=78.59 Aligned_cols=167 Identities=12% Similarity=0.046 Sum_probs=94.1
Q ss_pred ccCCEEEEecCCCCCCC----cCc-cc----CCCc---EEEecccccccCCcccceeEEEe-cChhHHHHHHHHHHhc--
Q 027424 4 AHGALLLVDNSIMSPVL----SRP-LE----LGAD---IVMHSATKFIAGHSDVMAGVLAV-KGERLAKELYFLQNAE-- 68 (223)
Q Consensus 4 ~~g~~lvVDnT~~s~~~----~~p-l~----~GAD---ivv~S~tK~l~G~~d~~~G~v~~-~~~~~~~~l~~~~~~~-- 68 (223)
++|++||+|+++..... ..+ +. .+.| |++.|++|.++..|..+|+++.. .++++.+.+.......
T Consensus 216 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~ 295 (413)
T 3t18_A 216 DKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSAR 295 (413)
T ss_dssp TCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhh
Confidence 89999999999732111 011 11 1223 78899999998778777665421 2566766665543221
Q ss_pred --CCCCChHhHHHHHhcHHHH---------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCe
Q 027424 69 --GSGLAPFDCWICLRGVKTM---------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 137 (223)
Q Consensus 69 --g~~~sp~da~ll~~~l~tl---------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~gg 137 (223)
....++.....+...++.- ....++..++...+.+.|++. .+ ++.-| .|+
T Consensus 296 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~~~-----------------~~~ 356 (413)
T 3t18_A 296 CNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KL-TMIPY-----------------FGG 356 (413)
T ss_dssp HHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC-CCBCC-----------------CSS
T ss_pred ccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CC-CccCC-----------------Cce
Confidence 1234555445444444321 122355677777788888876 33 22212 344
Q ss_pred eEEE-EeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHH
Q 027424 138 VLSF-LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDK 216 (223)
Q Consensus 138 l~sf-~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlEd~~dL~~dl~~ 216 (223)
++.+ .+.+.+...+.+..-+++- . | .++.+|||++..+.+++++-|.+
T Consensus 357 ~~~~~~~~~~~~~~~~l~~~gv~v---~----------~------------------g~~~iRis~~~~~~~~~l~~l~~ 405 (413)
T 3t18_A 357 FFTFIPTDKAFDIVKDLEKENIFT---I----------P------------------SAKGIRVAICGVGEEKIPKLVQR 405 (413)
T ss_dssp SCEEEECSCHHHHHHHHHHTTEEC---E----------E------------------CSSEEEECTTTSCGGGHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHhCCEEE---e----------c------------------CCCceEEEEeeCCHHHHHHHHHH
Confidence 4333 3433333333333333331 1 1 13679999997666666999999
Q ss_pred HHhc
Q 027424 217 ALRT 220 (223)
Q Consensus 217 Al~~ 220 (223)
+|+.
T Consensus 406 ~l~~ 409 (413)
T 3t18_A 406 LAFY 409 (413)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
No 173
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=98.51 E-value=2.2e-07 Score=81.87 Aligned_cols=170 Identities=16% Similarity=0.219 Sum_probs=93.5
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhH-HHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~-~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++... +.+.......|++ |++|.+++ +-.+ |+++++ +++ .+.+...........+
T Consensus 208 l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~-G~~~-G~~~~~-~~~~~~~~~~~~~~~~~~~~ 282 (395)
T 3nx3_A 208 LCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIM--TSAKALGC-GLSV-GAFVIN-QKVASNSLEAGDHGSTYGGN 282 (395)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGTT-TSCC-EEEEEC-HHHHHHHSCTTCCSSCBSCC
T ss_pred HHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEE--EecccccC-CCce-EEEEEc-hhhhhhhcCCcccCCCCCCC
Confidence 478999999999997421 1122233345665 57799986 5544 455554 445 4444322111222457
Q ss_pred hHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHH
Q 027424 74 PFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 147 (223)
Q Consensus 74 p~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~ 147 (223)
|..+......++.+. ...++..++...+.+.|+ .+|.+..+ ++.|.++.|++.+.+
T Consensus 283 ~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~ 344 (395)
T 3nx3_A 283 PLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKR------------------KGLGFMQGLSLDKSV 344 (395)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEECTTS
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EeEEEEEEEEeCCcc
Confidence 777777777777552 223445555555555554 45644332 235788889884422
Q ss_pred HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 148 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 148 ~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
.+.+|.+.+.- .+.-+ .|. .++.+|||.++ |+.+.+++-|+++++.
T Consensus 345 ~~~~~~~~l~~--~Gi~v--------~~~-----------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 345 KVAKVIQKCQE--NALLL--------ISC-----------------GENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp CHHHHHHHHHH--TTEEC--------EEE-----------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHH--CCCEE--------ecC-----------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 34445444321 11110 111 15789998654 4566677777777653
No 174
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=98.51 E-value=1.3e-06 Score=78.20 Aligned_cols=175 Identities=14% Similarity=0.069 Sum_probs=97.1
Q ss_pred CccccCCEEEEecCCCCCCC-----cCccc----CCCcEEEecccccccCCcccceeEEEecChhHH-------HHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-----SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-------KELYFL 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-----~~pl~----~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~-------~~l~~~ 64 (223)
+|+++|+++|+|++++.... ..... .+.++++.|++|.++..+..+| +++++++.+. ..+...
T Consensus 237 l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G-~~~~~~~~~~~~~~~~~~~~~~~ 315 (449)
T 3qgu_A 237 FARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLG-WTVVPKALKYANGEPVHADWNRV 315 (449)
T ss_dssp HHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCE-EEECCTTCBCTTSCBHHHHHHHH
T ss_pred HHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeE-EEecCHHHHhhhhhhHHHHHHHH
Confidence 37899999999999854211 11111 2457999999999985665554 4555543221 123233
Q ss_pred HHhcCCCCChHhHHHHHhcHH-----HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeE
Q 027424 65 QNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 139 (223)
Q Consensus 65 ~~~~g~~~sp~da~ll~~~l~-----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~ 139 (223)
......+.++.........++ .+..+.++..++...+.+.|++.. + ++..| ..|..+
T Consensus 316 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~----------------~~~~~~ 377 (449)
T 3qgu_A 316 MTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMG-F-SVYGG----------------DDAPYI 377 (449)
T ss_dssp HHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C-CEEES----------------SSSSEE
T ss_pred hhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-C-eeeCC----------------CCeeEE
Confidence 333222455654444444333 344556777888899999998873 3 23323 124455
Q ss_pred EEEeC---CHHHHHHHHhhcCcc-eeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC--CCHHHHHHH
Q 027424 140 SFLTG---SLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISD 213 (223)
Q Consensus 140 sf~~~---~~~~~~~f~~~l~l~-~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl--Ed~~dL~~d 213 (223)
.+.+. ..+.++++++.-++. ..+..+|. ..++.||||+.. |+.+..++.
T Consensus 378 ~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~-------------------------~~~~~iRis~~~~~e~i~~~l~~ 432 (449)
T 3qgu_A 378 WVGFPGKPSWDVFAEILERCNIVTTPGSGYGP-------------------------AGEGFVRASAFGSRENILEAVRR 432 (449)
T ss_dssp EEECTTSCHHHHHHHHHHHHCEECEEGGGGCG-------------------------GGTTEEEEECCSCHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHCCEEEecchHhCC-------------------------CCCCeEEEEecCCHHHHHHHHHH
Confidence 56664 223344555544443 11111110 025789999765 345556666
Q ss_pred HHHHHh
Q 027424 214 LDKALR 219 (223)
Q Consensus 214 l~~Al~ 219 (223)
|+++++
T Consensus 433 l~~~~~ 438 (449)
T 3qgu_A 433 FKEAYG 438 (449)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 666665
No 175
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=97.90 E-value=1.3e-08 Score=89.79 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=65.8
Q ss_pred CccccCCEEEEecCCCCCCC----cCcc----c--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC-
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPL----E--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG- 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl----~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g- 69 (223)
+|+++|+++|+|++++.... ..++ . .+.++++.|++|.++..+..+|. ++++++++.+.+.......+
T Consensus 192 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~~~~ 270 (392)
T 3b1d_A 192 LCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSY-AIIENPTLCAQFKHQQLVNNH 270 (392)
Confidence 47899999999999854221 1122 1 34569999999999756655554 54555456666554443332
Q ss_pred CCCChHhHHHHHhcHHH----HHHHHHHHHhHHHHHHHHHhc-CCCe
Q 027424 70 SGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRV 111 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~t----l~~R~~~~~~na~~la~~L~~-~p~v 111 (223)
.+.++...+.+...++. +..+.++..++...+.+.|++ .|.+
T Consensus 271 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 317 (392)
T 3b1d_A 271 HEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRL 317 (392)
Confidence 12345444444455543 233335556777777788877 4554
No 176
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=98.50 E-value=2.2e-05 Score=67.27 Aligned_cols=111 Identities=21% Similarity=0.150 Sum_probs=66.7
Q ss_pred CccccCCEEEEecCCCCC----CCcCccc----CCCcEEEecccccccCCcccce-eEEEecChhHHHHHHHHHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSP----VLSRPLE----LGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~----~~~~pl~----~GADivv~S~tK~l~G~~d~~~-G~v~~~~~~~~~~l~~~~~~~g~~ 71 (223)
+|+++|+++++|++++.. ....+.. .++|+++.|++|+ ++ .+| |+++. ++++.+++.......|..
T Consensus 168 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~---~~G~g~~~~-~~~~~~~~~~~~~~~~~~ 242 (356)
T 1v72_A 168 VCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GV---LAAEAIVLF-NTSLATEMSYRRKRAGHL 242 (356)
T ss_dssp HHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TC---SSCEEEEES-SGGGHHHHHHHHHHTTCC
T ss_pred HHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CC---cCccEEEEE-CHHHHhhHHHHhhccCch
Confidence 478999999999997421 1112222 4799999999999 43 356 56655 556766666554444432
Q ss_pred CC-h-HhHHHHHhcHH--HHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 72 LA-P-FDCWICLRGVK--TMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 72 ~s-p-~da~ll~~~l~--tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
.+ + ......++.++ .+..+.++..+++..+.+.|++.|++ ++..|
T Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~ 291 (356)
T 1v72_A 243 SSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGV-EVLGG 291 (356)
T ss_dssp CSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTE-EEESC
T ss_pred hhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCc-EEccC
Confidence 22 2 11111122221 12334567788889999999988876 34445
No 177
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=98.50 E-value=4.6e-07 Score=81.87 Aligned_cols=169 Identities=13% Similarity=0.205 Sum_probs=96.1
Q ss_pred CccccCCEEEEecCCCCCCCc-------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++ +++.. .......|++ |++|.++| +..-+|+++++ +++.+.+...........+
T Consensus 252 l~~~~gillI~DEv~-~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~-G~~~~G~v~~~-~~~~~~l~~~~~~~t~~~~ 326 (439)
T 2oat_A 252 LCTRHQVLFIADEIQ-TGLARTGRWLAVDYENVRPDIV--LLGKALSG-GLYPVSAVLCD-DDIMLTIKPGEHGSTYGGN 326 (439)
T ss_dssp HHHHTTCEEEEECTT-TTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEEC-HHHHTTSCTTSSCCSSTTC
T ss_pred HHHHcCCEEEEeccc-cCCccCCcchhHHHhCCCCcEE--EecccccC-CCCCeEEEEEC-HHHHhccCCCCcccCCCcC
Confidence 478999999999998 43321 2222346876 88999996 42235666665 4554443221111112347
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH--HHH
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALS 149 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~--~~~ 149 (223)
|..+......++.+.. ..++..++...+.+.|++.. +|.. ...++.|.++.|++.+. ...
T Consensus 327 ~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~------~~~~----------~~~~~~g~~~~v~l~~~~~~~~ 390 (439)
T 2oat_A 327 PLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLP------SDVV----------TAVRGKGLLNAIVIKETKDWDA 390 (439)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSC------TTTE----------EEEEEETTEEEEEECCCSSCCH
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhc------CCCc----------EEEEeeeeEEEEEEecCccHHH
Confidence 7777777777776642 34666677777777776531 1210 00124678888988421 112
Q ss_pred HHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 150 KHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 150 ~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
.+|.+.+ +++- .|. .++.+||++++ |+.+.+++.|+++++.
T Consensus 391 ~~l~~~l~~~Gv~v-------------~~~-----------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 391 WKVCLRLRDNGLLA-------------KPT-----------------HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp HHHHHHHHHTTEEC-------------CBS-----------------SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCeEE-------------ecC-----------------CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 3343333 2221 110 24679998874 4567777777777654
No 178
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=98.50 E-value=1.7e-06 Score=76.18 Aligned_cols=108 Identities=10% Similarity=-0.002 Sum_probs=63.9
Q ss_pred CccccCCEEEEecCCCCCCCcCc------c----cC-CCcEEEecccccccCCcccceeEEEe-cChh----HHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP------L----EL-GADIVMHSATKFIAGHSDVMAGVLAV-KGER----LAKELYFL 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p------l----~~-GADivv~S~tK~l~G~~d~~~G~v~~-~~~~----~~~~l~~~ 64 (223)
+|+++|+++|+|+++.......+ + .. .-.|++.|+||.++.+|..+|.+++. .+++ +...+...
T Consensus 203 ~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~ 282 (401)
T 7aat_A 203 VVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKIL 282 (401)
T ss_dssp HHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred HHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHH
Confidence 37899999999999864432211 1 11 34589999999999888888776643 2333 33334333
Q ss_pred HHhcCCCCChHhHHHHHhcH----------HHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 65 QNAEGSGLAPFDCWICLRGV----------KTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 65 ~~~~g~~~sp~da~ll~~~l----------~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
........+......+.+.+ +.+....++..++...+.+.|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 283 IRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33322233344333333333 223333456667778888888875
No 179
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=98.49 E-value=7.2e-08 Score=88.01 Aligned_cols=107 Identities=21% Similarity=0.284 Sum_probs=64.4
Q ss_pred CccccCCEEEEecCCCCCC--CcCcccCCCcEEEecccccccCC-c--ccceeEEEecChhHHHHHHH-H----------
Q 027424 1 MAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSATKFIAGH-S--DVMAGVLAVKGERLAKELYF-L---------- 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~--~~~pl~~GADivv~S~tK~l~G~-~--d~~~G~v~~~~~~~~~~l~~-~---------- 64 (223)
+||++|+++++|++++.+. ..+|.++|+|+++.|+||+++++ + -.-.|++++++ ++.+.+.. .
T Consensus 228 l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~-~l~~~l~~~~~~~~g~~~~~ 306 (474)
T 1wyu_B 228 LCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKA-HLAPYLPVPLVERGEEGFYL 306 (474)
T ss_dssp HHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECG-GGGGGCCSCEEEECSSCEEE
T ss_pred HHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcH-HHHHhCCCCeeeccCCeeEe
Confidence 4789999999999985443 24566679999999999999854 1 11246666665 34333320 0
Q ss_pred --------HHhcCCCCChHh---HHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 65 --------QNAEGSGLAPFD---CWICLR--GVKTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 65 --------~~~~g~~~sp~d---a~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
.+....+.++.. ++..++ +.+.+..+.++..+++..+.+.|++.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~ 363 (474)
T 1wyu_B 307 DFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK 363 (474)
T ss_dssp ECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 000001123321 122221 22345555677888999999999886
No 180
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=98.49 E-value=8.7e-07 Score=78.60 Aligned_cols=105 Identities=13% Similarity=0.103 Sum_probs=60.6
Q ss_pred ccCCEEEEecCCCCCCCc----Cc-cc----CCCc---EEEecccccccCCcccceeEEEe-cChhHHHHHHHHHHhc--
Q 027424 4 AHGALLLVDNSIMSPVLS----RP-LE----LGAD---IVMHSATKFIAGHSDVMAGVLAV-KGERLAKELYFLQNAE-- 68 (223)
Q Consensus 4 ~~g~~lvVDnT~~s~~~~----~p-l~----~GAD---ivv~S~tK~l~G~~d~~~G~v~~-~~~~~~~~l~~~~~~~-- 68 (223)
++|+++|+|+++...... .+ +. ...| |++.|++|.++.++..+|+++.. .++++.+.+.......
T Consensus 217 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 296 (418)
T 3rq1_A 217 RNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSR 296 (418)
T ss_dssp SCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 899999999997422110 01 11 1234 88899999998788787765531 3566766665543221
Q ss_pred --CCCCChHhHHHHHhcHHH------HH----HHHHHHHhHHHHHHHHHhcC
Q 027424 69 --GSGLAPFDCWICLRGVKT------MA----LRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 69 --g~~~sp~da~ll~~~l~t------l~----~R~~~~~~na~~la~~L~~~ 108 (223)
....++.....+...++. +. ...++..++...+.+.|++.
T Consensus 297 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 297 ATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp HHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 123455444444444422 11 22245566677777788765
No 181
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.47 E-value=3.7e-06 Score=75.02 Aligned_cols=179 Identities=11% Similarity=0.072 Sum_probs=97.2
Q ss_pred Ccc-ccCCEEEEecCCCC-CCC-----cCcc--------cCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH
Q 027424 1 MAH-AHGALLLVDNSIMS-PVL-----SRPL--------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 65 (223)
Q Consensus 1 ia~-~~g~~lvVDnT~~s-~~~-----~~pl--------~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~ 65 (223)
+|+ ++|+++|+|++++- .+. ..++ ..+-++++.|++|+ .+.+..+|. ++++ +++.+.+....
T Consensus 207 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~-~~~~-~~l~~~l~~~~ 283 (422)
T 3d6k_A 207 MSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSF-FASS-KENIEWYASHA 283 (422)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEE-EECC-HHHHHHHHHHH
T ss_pred HHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEE-EEeC-HHHHHHHHHHH
Confidence 477 89999999999862 221 1133 23567999999998 666666654 5444 66777776665
Q ss_pred HhcCCCCChHhHHHHHhcHHH---HHHH----HHHHHhHHHHHHHHHhc----CCCeeEEEcCCCCCCcchHHHHhhhCC
Q 027424 66 NAEGSGLAPFDCWICLRGVKT---MALR----VEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKG 134 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l~t---l~~R----~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g 134 (223)
.....+.++...+.+...++. +... .+...++...+.+.|++ .+.+ ++..| .
T Consensus 284 ~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~-~~~~p----------------~ 346 (422)
T 3d6k_A 284 NVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVA-KWTSP----------------T 346 (422)
T ss_dssp HHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCE-EECCC----------------S
T ss_pred HhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCce-EEeCC----------------C
Confidence 554445666655555444432 1122 23334455566666654 3323 33344 1
Q ss_pred CCeeEEEEeC--CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC---CCHHH
Q 027424 135 AGSVLSFLTG--SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVND 209 (223)
Q Consensus 135 ~ggl~sf~~~--~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---Ed~~d 209 (223)
.|..+.+++. +.+...+.+..-++. +.-|+.. .+.. .+ -.++.+|||++. |+.+.
T Consensus 347 ~g~~~~~~~~~~~~~~~~~~l~~~gV~---v~~~g~~----f~~~-~~------------~~~~~iRis~~~~~~e~i~~ 406 (422)
T 3d6k_A 347 GGYFISVDVVPGTASRVVELAKEAGIA---LTGAGSS----FPLH-ND------------PNNENIRLAPSLPPVAELEV 406 (422)
T ss_dssp BSSCEEEEESTTCHHHHHHHHHHTTEE---CCCTTTT----SGGG-CC------------TTSCEEEECCSSSCHHHHHH
T ss_pred cceEEEEECCCCCHHHHHHHHHHCCeE---EEcCccc----cCCC-CC------------CCCCeEEEecCCCCHHHHHH
Confidence 2445666774 233333444443332 2221110 0000 00 035789999994 45666
Q ss_pred HHHHHHHHHh
Q 027424 210 LISDLDKALR 219 (223)
Q Consensus 210 L~~dl~~Al~ 219 (223)
+++-|+++++
T Consensus 407 ~~~~l~~~l~ 416 (422)
T 3d6k_A 407 AMDGFATCVL 416 (422)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777777765
No 182
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=98.46 E-value=6.1e-07 Score=82.15 Aligned_cols=177 Identities=15% Similarity=0.220 Sum_probs=102.9
Q ss_pred CccccCCEEEEecCCCCCCCcC----cccC---CCcEEEecccccccCCcccceeEEEecChhH-HHHHHHHHHhc----
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----PLEL---GADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNAE---- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----pl~~---GADivv~S~tK~l~G~~d~~~G~v~~~~~~~-~~~l~~~~~~~---- 68 (223)
+||++|++++||.+++...... .+.. ++|.++-|.||+++++- -+|++.++++.. .+.+.....++
T Consensus 259 la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~--g~g~l~~~~~~~l~~~~~~~~~yl~~~~ 336 (475)
T 3k40_A 259 VGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNF--DCSAMWLKDPSWVVNAFNVDPLYLKHDM 336 (475)
T ss_dssp HHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCS--SCEEEEESSGGGC---------------
T ss_pred HHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCC--ceEEEEEeCHHHHHHHhcCCccccCCCc
Confidence 4789999999999997753322 2222 47999999999998763 345566666543 22211110000
Q ss_pred -C---------CCCC----hHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh
Q 027424 69 -G---------SGLA----PFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 69 -g---------~~~s----p~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~ 132 (223)
+ ...+ ....|..++ +.+.+..++++..+++..+++.|++.|.++ +..| |
T Consensus 337 ~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~-l~~~-----~--------- 401 (475)
T 3k40_A 337 QGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFE-LAAE-----I--------- 401 (475)
T ss_dssp ------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-ESSC-----C---------
T ss_pred CCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE-EecC-----C---------
Confidence 0 0011 122333333 344567788999999999999999999873 4333 1
Q ss_pred CCCCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-----CC
Q 027424 133 KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-----ED 206 (223)
Q Consensus 133 ~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-----Ed 206 (223)
..++++|.+ +......++.+++.- . |. ++..|. .+ . ....+|++++- ||
T Consensus 402 --~~~iv~f~~~~~~~~~~~l~~~L~~--~----g~---~~~~~~--~~----------~--g~~~lR~~~~~~~tt~~d 456 (475)
T 3k40_A 402 --NMGLVCFRLKGSNERNEALLKRING--R----GH---IHLVPA--KI----------K--DVYFLRMAICSRFTQSED 456 (475)
T ss_dssp --BTTEEEEEESSCHHHHHHHHHHHHH--H----TS---CBCEEE--EE----------T--TEEEEEEECCCTTCCHHH
T ss_pred --ceEEEEEEeCCchHHHHHHHHHHHh--C----Cc---EEEEee--EE----------C--CEEEEEEEeCCCCCCHHH
Confidence 357899988 444445566555421 1 10 001111 11 0 24689999862 46
Q ss_pred HHHHHHHHHHHHh
Q 027424 207 VNDLISDLDKALR 219 (223)
Q Consensus 207 ~~dL~~dl~~Al~ 219 (223)
++.+++.|++.++
T Consensus 457 i~~~~~~i~~~~~ 469 (475)
T 3k40_A 457 MEYSWKEVSAAAD 469 (475)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7778888877765
No 183
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=98.46 E-value=2.1e-06 Score=76.50 Aligned_cols=108 Identities=10% Similarity=-0.022 Sum_probs=64.4
Q ss_pred CccccCCEEEEecCCCCCCCc-----Ccc-----cCCCcEEEecccccccCCcccceeEEE-ecChhHHHHH----HHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPL-----ELGADIVMHSATKFIAGHSDVMAGVLA-VKGERLAKEL----YFLQ 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl-----~~GADivv~S~tK~l~G~~d~~~G~v~-~~~~~~~~~l----~~~~ 65 (223)
+|+++|+++|+|++++....- .++ ..+-+|++.|++|.++..|..+|.+++ ..++++.+++ +...
T Consensus 223 ~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~ 302 (420)
T 4f4e_A 223 VVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVI 302 (420)
T ss_dssp HHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred HHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 378899999999998433221 111 134569999999999877888877653 3344444332 2222
Q ss_pred HhcCCCCChHhHHHHHhcHHH----------HHHHHHHHHhHHHHHHHHHhcC
Q 027424 66 NAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l~t----------l~~R~~~~~~na~~la~~L~~~ 108 (223)
+......++...+.+...++. +..+.++..++...+.+.|++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 303 RTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222223344444444433332 3344466677788888888876
No 184
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=98.46 E-value=1.9e-07 Score=82.34 Aligned_cols=168 Identities=15% Similarity=0.217 Sum_probs=96.4
Q ss_pred CccccCCEEEEecCCCCCCCc--Ccc---cCC--CcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS--RPL---ELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~--~pl---~~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|++++ ++.. ++. .+| +|++ |++|++++ +..+|+ ++++++ +. .+...........+
T Consensus 212 l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~r~G~-~~~~~~-~~-~l~~~~~~~~~~~~ 284 (397)
T 2ord_A 212 LCDEYDALLVFDEVQC-GMGRTGKLFAYQKYGVVPDVL--TTAKGLGG-GVPIGA-VIVNER-AN-VLEPGDHGTTFGGN 284 (397)
T ss_dssp HHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSCCEE-EEECST-TC-CCCTTSSCCSSTTC
T ss_pred HHHHcCCEEEEEeccc-CCccCccchhhhhhCCCCCee--eeccccCC-CcCeEE-EEEchH-hc-ccCCCCcCCCCCCC
Confidence 4789999999999995 4422 121 224 7876 77899995 455655 545654 43 33211111222457
Q ss_pred hHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhcC----CCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHH
Q 027424 74 PFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA 147 (223)
Q Consensus 74 p~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~~----p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~ 147 (223)
|..++.+...|+.+. ...++..++...+.+.|++. |.+.. ..+.|.++.|++.+..
T Consensus 285 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~------------------~~~~g~~~~~~~~~~~ 346 (397)
T 2ord_A 285 PLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYDVVAD------------------VRGMGLMIGIQFREEV 346 (397)
T ss_dssp HHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE------------------EEEETTEEEEEECTTS
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCceEE------------------EEEEeEEEEEEECChH
Confidence 777777777777663 23466667777777777653 32211 1225788889884321
Q ss_pred HHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHhc
Q 027424 148 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 220 (223)
Q Consensus 148 ~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~Al~~ 220 (223)
...+|.+.|.--.+.+ .|. .++.+|||++ .|+.+.+++.|+++++.
T Consensus 347 ~~~~l~~~l~~~gi~v----------~~~-----------------~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 347 SNREVATKCFENKLLV----------VPA-----------------GNNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp CHHHHHHHHHHTTEEC----------EEE-----------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEE----------ccC-----------------CCCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 2333444332111111 111 1467999944 45678888888888764
No 185
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=98.45 E-value=5.5e-07 Score=87.10 Aligned_cols=106 Identities=16% Similarity=0.072 Sum_probs=71.0
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccC---CCc----EEEecccccccCCcccceeEEEecChhH--------H
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLEL---GAD----IVMHSATKFIAGHSDVMAGVLAVKGERL--------A 58 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~---GAD----ivv~S~tK~l~G~~d~~~G~v~~~~~~~--------~ 58 (223)
+||++|++|+||++|+.++. ..++.. |+| ++++|+||+++|+ .+||+++++++.+ .
T Consensus 305 la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~--~~gg~I~v~~~~l~g~~~~i~~ 382 (730)
T 1c4k_A 305 RIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGF--SQTSQIHKKDSHIKGQLRYCDH 382 (730)
T ss_dssp HHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCC--TTCEEEEEECGGGTTSTTCCCH
T ss_pred HHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCC--CCEEEEEecchhhcCcccccCH
Confidence 47999999999999976432 235654 999 9999999999966 4778886665543 1
Q ss_pred HHHHHHHHhcCCCCChHhHHHHHhcHHH---------HHHHHHHHHhHHHHHHHHHhc-CCCe
Q 027424 59 KELYFLQNAEGSGLAPFDCWICLRGVKT---------MALRVEKQQDNAQKIAEFLAS-HPRV 111 (223)
Q Consensus 59 ~~l~~~~~~~g~~~sp~da~ll~~~l~t---------l~~R~~~~~~na~~la~~L~~-~p~v 111 (223)
.++.......+. .+| .+.++.+++. -..++++..+++..+.+.|++ .+++
T Consensus 383 ~~~~~~~~~~~s-tsp--~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~ 442 (730)
T 1c4k_A 383 KHFNNSFNLFMS-TSP--FYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMF 442 (730)
T ss_dssp HHHHHHHHHHSC-SSC--CHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHhCC-CCC--cHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCe
Confidence 233333333332 234 2333333332 245678899999999999988 5765
No 186
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=98.42 E-value=4.7e-07 Score=81.56 Aligned_cols=167 Identities=11% Similarity=0.166 Sum_probs=94.5
Q ss_pred CccccCCEEEEecCCCCCCCc-------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|++||+|+++. ++.. .......|++ |++|.++| +..-.|+++++ +++.+.+...........+
T Consensus 241 l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~-G~~~~G~v~~~-~~~~~~l~~~~~~~t~~~~ 315 (433)
T 1z7d_A 241 ICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVI--LLGKALSG-GHYPISAVLAN-DDIMLVIKPGEHGSTYGGN 315 (433)
T ss_dssp HHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEEC-HHHHTTCCTTCCCCTTTTC
T ss_pred HHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEE--EECccccC-CCCCeEEEEEC-HHHHhhhccccccccCCCC
Confidence 4789999999999984 3321 2223357876 88899995 42224556555 4554433211011112346
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc----CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCH-
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL- 146 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~- 146 (223)
|..+......|+.+.. ..++..++...+.+.|++ +|.+..+ ++.|.++.|++...
T Consensus 316 ~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~------------------~~~g~~~~i~~~~~~ 377 (433)
T 1z7d_A 316 PLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDV------------------RGKGLLCAIEFKNEL 377 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE------------------EEETTEEEEEECTTT
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EeeeeEEEEEEccCh
Confidence 7777777777776642 245555666666666653 3432221 23678899988432
Q ss_pred HHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHh
Q 027424 147 ALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 219 (223)
Q Consensus 147 ~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~ 219 (223)
....+|.+.+ +++- .|. .++.+|+++++ |+.+.+++-|+++++
T Consensus 378 ~~~~~~~~~l~~~Gv~v-------------~~~-----------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 427 (433)
T 1z7d_A 378 VNVLDICLKLKENGLIT-------------RDV-----------------HDKTIRLTPPLCITKEQLDECTEIIVKTVK 427 (433)
T ss_dssp CCHHHHHHHHHHTTEEC-------------CEE-----------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCeEE-------------ecC-----------------CCCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 1123343333 2220 111 24679998775 456777777777765
Q ss_pred c
Q 027424 220 T 220 (223)
Q Consensus 220 ~ 220 (223)
.
T Consensus 428 ~ 428 (433)
T 1z7d_A 428 F 428 (433)
T ss_dssp H
T ss_pred H
Confidence 4
No 187
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=98.41 E-value=7.7e-07 Score=81.45 Aligned_cols=177 Identities=18% Similarity=0.256 Sum_probs=104.8
Q ss_pred CccccCCEEEEecCCCCCCC----cCcccCC---CcEEEecccccccCCcccceeEEEecChhHHHH-HHHHHHhc----
Q 027424 1 MAHAHGALLLVDNSIMSPVL----SRPLELG---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE-LYFLQNAE---- 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~----~~pl~~G---ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~-l~~~~~~~---- 68 (223)
+|+++|+++.||.+++.... .+.+..| ||.++-+.||+++++- -+|++.++++....+ +.....+.
T Consensus 266 la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~--g~g~l~~~~~~~l~~~~~~~~~yl~~~~ 343 (481)
T 4e1o_A 266 ICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHF--DCTGFWVKDKYKLQQTFSVNPIYLRHAN 343 (481)
T ss_dssp HHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCS--SCEEEEESBHHHHHTTTCCCCGGGCCTT
T ss_pred HHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCC--ceEEEEEeCHHHHHHHhcCCchhccCcc
Confidence 47899999999999976532 2222234 5999999999999763 345566676543221 10000010
Q ss_pred -C-----------CC--CChHhHHHHHh--cHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhh
Q 027424 69 -G-----------SG--LAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 132 (223)
Q Consensus 69 -g-----------~~--~sp~da~ll~~--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~ 132 (223)
+ .+ ......|..++ +.+.+..++++..+++..+++.|++.|.++ +..| |
T Consensus 344 ~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~-~~~~-----~--------- 408 (481)
T 4e1o_A 344 SGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFE-IPAK-----R--------- 408 (481)
T ss_dssp TTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEE-CCSC-----C---------
T ss_pred cCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EecC-----C---------
Confidence 0 00 11223344444 445577888999999999999999998864 3322 1
Q ss_pred CCCCeeEEEEe-CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC-----CC
Q 027424 133 KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-----ED 206 (223)
Q Consensus 133 ~g~ggl~sf~~-~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl-----Ed 206 (223)
..++++|.+ +......++.+++.- . |. .+..|.. + . ....+|++++- ||
T Consensus 409 --~~~~v~f~~~~~~~~~~~l~~~L~~--~----g~---~~~~~~~--~----------~--g~~~lR~~~~~~~tt~~d 463 (481)
T 4e1o_A 409 --HLGLVVFRLKGPNSLTENVLKEIAK--A----GR---LFLIPAT--I----------Q--DKLIIRFTVTSQFTTRDD 463 (481)
T ss_dssp --CSSEEEEEESSCHHHHHHHHHHHHH--H----CS---SBCEEEE--E----------T--TEEEEEEECCCTTCCHHH
T ss_pred --ceeEEEEEeCCchHHHHHHHHHHHh--C----Ce---EEEEeeE--E----------C--CEEEEEEEeCCCCCCHHH
Confidence 357889988 444445556555421 0 00 0001111 0 0 23579999873 46
Q ss_pred HHHHHHHHHHHHh
Q 027424 207 VNDLISDLDKALR 219 (223)
Q Consensus 207 ~~dL~~dl~~Al~ 219 (223)
++.+++.|++.++
T Consensus 464 i~~~~~~i~~~~~ 476 (481)
T 4e1o_A 464 ILRDWNLIRDAAT 476 (481)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777777665
No 188
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.35 E-value=7.5e-07 Score=80.15 Aligned_cols=107 Identities=17% Similarity=0.154 Sum_probs=63.9
Q ss_pred CccccCCEEEEecCCCC-----------CC-CcCccc------CCCcEEEecccccccCCcccceeEEEecCh-hHHHHH
Q 027424 1 MAHAHGALLLVDNSIMS-----------PV-LSRPLE------LGADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKEL 61 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s-----------~~-~~~pl~------~GADivv~S~tK~l~G~~d~~~G~v~~~~~-~~~~~l 61 (223)
+|++||++||+|++.+. .+ ...+.+ .++|+++.|++|.++.. +||+++.+++ ++.+++
T Consensus 212 la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~d~~~l~~~~ 288 (467)
T 1ax4_A 212 IAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLN---IGGLVAIRDNEEIFTLA 288 (467)
T ss_dssp HHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCS---SCEEEEESSCHHHHHHH
T ss_pred HHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCC---cceEEEeCCHHHHHHHH
Confidence 47899999999997432 11 112222 24899999999998643 6787876645 666665
Q ss_pred HHHHHhcCC-----CCChHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhcCCCe
Q 027424 62 YFLQNAEGS-----GLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 62 ~~~~~~~g~-----~~sp~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~~p~v 111 (223)
.......+. ..+......+..+++... .++++..+++..+.+.|++ +.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~~ 344 (467)
T 1ax4_A 289 RQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLRE-AGI 344 (467)
T ss_dssp HHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred HhhccccccccccCCccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh-CCC
Confidence 544332111 112211121222454432 2566667888899999987 443
No 189
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.33 E-value=2.8e-06 Score=74.42 Aligned_cols=109 Identities=13% Similarity=0.019 Sum_probs=63.4
Q ss_pred CccccCCEEEEecCCCCCCCc-----Cccc----CC-CcEEEecccccccCCcccceeEEE-ecCh----hHHHHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPLE----LG-ADIVMHSATKFIAGHSDVMAGVLA-VKGE----RLAKELYFLQ 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl~----~G-ADivv~S~tK~l~G~~d~~~G~v~-~~~~----~~~~~l~~~~ 65 (223)
+|+++|+++|+|++++....- .++. .+ -++++.|++|.++..|..+|.++. ..++ ++.+.+....
T Consensus 200 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~ 279 (396)
T 2q7w_A 200 LSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAI 279 (396)
T ss_dssp HHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHH
Confidence 368899999999998643221 1222 12 358899999999866766666543 2233 3333343322
Q ss_pred HhcCCCCChHhHHHHHhcHHH----------HHHHHHHHHhHHHHHHHHHhcCC
Q 027424 66 NAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l~t----------l~~R~~~~~~na~~la~~L~~~p 109 (223)
.....+.++...+.+...|+. +....++..++...+.+.|++.+
T Consensus 280 ~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 280 RANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp HTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTT
T ss_pred hhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 222223466656555555532 22223555677777888888764
No 190
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=98.29 E-value=3.3e-06 Score=74.58 Aligned_cols=107 Identities=13% Similarity=0.059 Sum_probs=63.3
Q ss_pred CccccCCEEEEecCCCCCC-----CcCcccCC--C--cEEEecccccccCCcccceeEEEecChhH------HHHHHH-H
Q 027424 1 MAHAHGALLLVDNSIMSPV-----LSRPLELG--A--DIVMHSATKFIAGHSDVMAGVLAVKGERL------AKELYF-L 64 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-----~~~pl~~G--A--Divv~S~tK~l~G~~d~~~G~v~~~~~~~------~~~l~~-~ 64 (223)
+|+++|+++|+|++++... ......+. . ++++.|++|.++..|..+|. ++++++.. .+.+.. .
T Consensus 191 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~-~~~~~~~~~~~~~~~~~~~~~~ 269 (400)
T 3asa_A 191 YAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGW-TVIPQELTYADGHFVIQDWERF 269 (400)
T ss_dssp HHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEE-EECCTTCBCTTSCBHHHHHHHH
T ss_pred HHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeE-EeeChhhccchhhhHHHHHHHH
Confidence 3688999999999986321 11222222 3 48899999999766666655 55555331 343332 1
Q ss_pred HHhcCCCCChHhHHHHHhcHHH--HHHHHHHHHhHHHHHHHHHhcC
Q 027424 65 QNAEGSGLAPFDCWICLRGVKT--MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 65 ~~~~g~~~sp~da~ll~~~l~t--l~~R~~~~~~na~~la~~L~~~ 108 (223)
......+.++.....+...++. +....++..++...+.+.|++.
T Consensus 270 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 315 (400)
T 3asa_A 270 LSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT 315 (400)
T ss_dssp HHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred hccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 2222223566555555555554 2333466667788888889876
No 191
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=98.28 E-value=2.4e-06 Score=82.87 Aligned_cols=104 Identities=13% Similarity=0.090 Sum_probs=70.8
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCC--CcE------EEecccccccCCcccceeEEEecCh--hH-HHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELG--ADI------VMHSATKFIAGHSDVMAGVLAVKGE--RL-AKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~G--ADi------vv~S~tK~l~G~~d~~~G~v~~~~~--~~-~~~l~ 62 (223)
+||++|++|+||++|+..+. ..|+ .| +|+ +++|+||+++|+ .++|+++++++ .+ ..++.
T Consensus 336 ia~~~~~~livDeA~~~~~~~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~--~~g~~i~~~~~~~~i~~~~~~ 412 (755)
T 2vyc_A 336 LLEKTSDRLHFDEAWYGYARFNPIYADHYAM-RGEPGDHNGPTVFATHSTHKLLNAL--SQASYIHVREGRGAINFSRFN 412 (755)
T ss_dssp HHTTTCSEEEEECTTCTTGGGCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSSCC--TTCEEEEEECCBTCCCHHHHH
T ss_pred HHHHcCCEEEEECcCchhcccCcccCCcchh-cCCcCCccCCCeEEEECccccccCc--CCeeeeeecCcccccCHHHHH
Confidence 48999999999999976432 2455 78 897 999999999976 47888877664 22 23333
Q ss_pred HHHHhcCCCCChHhHHHHHhcHHH---------HHHHHHHHHhHHHHHHHHHhcCCC
Q 027424 63 FLQNAEGSGLAPFDCWICLRGVKT---------MALRVEKQQDNAQKIAEFLASHPR 110 (223)
Q Consensus 63 ~~~~~~g~~~sp~da~ll~~~l~t---------l~~R~~~~~~na~~la~~L~~~p~ 110 (223)
......+ +.+| .++++.+++. ...++++..+++..+.+.|++.+.
T Consensus 413 ~~~~~~~-s~sp--~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 413 QAYMMHA-TTSP--LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHHTS-CSSC--CHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC-CCCH--HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3333333 2344 3444454443 234678889999999999987654
No 192
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=98.27 E-value=6.6e-06 Score=72.02 Aligned_cols=109 Identities=12% Similarity=0.076 Sum_probs=63.0
Q ss_pred CccccCCEEEEecCCCCCCCc-----Ccc-----cCCCcEEEecccccccCCcccceeEEEe-cChhHHHHHHH-HH---
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPL-----ELGADIVMHSATKFIAGHSDVMAGVLAV-KGERLAKELYF-LQ--- 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl-----~~GADivv~S~tK~l~G~~d~~~G~v~~-~~~~~~~~l~~-~~--- 65 (223)
+|+++|+++|+|++++....- .++ ..+-.|++.|++|.++-.|..+|.+++. .+.++.+++.. ..
T Consensus 201 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~ 280 (397)
T 3fsl_A 201 ILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATV 280 (397)
T ss_dssp HHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred HHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHH
Confidence 378899999999998543221 111 1234599999999998667777776542 33444433321 11
Q ss_pred HhcCCCCChHhHHHHHhcH----------HHHHHHHHHHHhHHHHHHHHHhcCC
Q 027424 66 NAEGSGLAPFDCWICLRGV----------KTMALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l----------~tl~~R~~~~~~na~~la~~L~~~p 109 (223)
.......++.....+...+ +.+..+.++..++...+.+.|++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 281 RRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp HTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1122222333333332222 2244555777888888889998764
No 193
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=98.25 E-value=2.5e-06 Score=76.32 Aligned_cols=172 Identities=13% Similarity=0.160 Sum_probs=94.9
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|+++|++||+|++++.. +.........|++ |++|.+++ +..+ |+++.+ +++.+.+......... .+|
T Consensus 230 l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G~ri-G~~~~~-~~~~~~~~~~~~~~t~-~~~ 303 (439)
T 3dxv_A 230 ICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-GLPL-SAVIAP-AEILDCASAFAMQTLH-GNP 303 (439)
T ss_dssp HHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TSCC-EEEEEE-HHHHTSCSSSSCCTTT-TCH
T ss_pred HHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-Ccce-EEEEEC-HHHHhhhcCCCcCCCc-ccH
Confidence 478999999999998621 1112222346776 89999996 6555 556554 4554433221111122 466
Q ss_pred HhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhc----CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-----
Q 027424 75 FDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT----- 143 (223)
Q Consensus 75 ~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~----- 143 (223)
..+...+..++.+. ...++..++...+.+.|++ +|.+..+ .+.|.++.|++
T Consensus 304 ~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~ 365 (439)
T 3dxv_A 304 ISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI------------------RGRGLACGMELVCDRQ 365 (439)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEEecCcc
Confidence 66666666666542 2245555666666555553 5654332 23577888877
Q ss_pred ---CCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHH
Q 027424 144 ---GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDK 216 (223)
Q Consensus 144 ---~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~ 216 (223)
.....+.+|.+.+.- .++-+ .|. |..++.+||+..+ |+.+.+++.|++
T Consensus 366 ~~~~~~~~~~~~~~~l~~--~Gv~v--------~~~---------------~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 420 (439)
T 3dxv_A 366 SREPARAETAKLIYRAYQ--LGLVV--------YYV---------------GMNGNVLEFTPPLTITETDIHKALDLLDR 420 (439)
T ss_dssp TTEECHHHHHHHHHHHHH--HTEEC--------EEE---------------STTSCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHH--CCcEE--------eec---------------CCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 233445555544321 11111 111 1124779998654 456777788888
Q ss_pred HHhcC
Q 027424 217 ALRTG 221 (223)
Q Consensus 217 Al~~~ 221 (223)
+++..
T Consensus 421 ~l~~~ 425 (439)
T 3dxv_A 421 AFSEL 425 (439)
T ss_dssp HHHTG
T ss_pred HHHHH
Confidence 77643
No 194
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=98.23 E-value=4e-06 Score=75.39 Aligned_cols=107 Identities=18% Similarity=0.033 Sum_probs=60.7
Q ss_pred CccccCCEEEEecCCCC------------CCCcCccc------CCCcEEEecccccccCCcccceeEEEecCh---hHHH
Q 027424 1 MAHAHGALLLVDNSIMS------------PVLSRPLE------LGADIVMHSATKFIAGHSDVMAGVLAVKGE---RLAK 59 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------------~~~~~pl~------~GADivv~S~tK~l~G~~d~~~G~v~~~~~---~~~~ 59 (223)
+|++||++|++|.+.+. .....+.. .++|+++.|++|.++.. +||+++.+++ +...
T Consensus 212 la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~~~~~~~~~~ 288 (467)
T 2oqx_A 212 IAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCMKDDSFFDVYT 288 (467)
T ss_dssp HHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCS---SCEEEEECSGGGHHHHH
T ss_pred HHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCC---CceEEEecChhHHHHHH
Confidence 47999999999954322 11122222 35899999999999753 5787776655 2333
Q ss_pred HHHHHHHhcC-C----CCChHhHHHHHhcHHHH--HHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 60 ELYFLQNAEG-S----GLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 60 ~l~~~~~~~g-~----~~sp~da~ll~~~l~tl--~~R~~~~~~na~~la~~L~~~p~v 111 (223)
+++......+ . ..+......+..+++.. ..++++..+++..+.+.|++. ++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~ 346 (467)
T 2oqx_A 289 ECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GV 346 (467)
T ss_dssp HHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 3333221111 1 11221111122233332 235667778899999999887 44
No 195
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=98.21 E-value=5.6e-06 Score=72.55 Aligned_cols=108 Identities=15% Similarity=0.002 Sum_probs=60.7
Q ss_pred CccccCCEEEEecCCCCCCCc-----Cccc----CCC-cEEEecccccccCCcccceeEEEe-cChhHHHH----HHHHH
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-----RPLE----LGA-DIVMHSATKFIAGHSDVMAGVLAV-KGERLAKE----LYFLQ 65 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-----~pl~----~GA-Divv~S~tK~l~G~~d~~~G~v~~-~~~~~~~~----l~~~~ 65 (223)
+|+++|+++|+|++++....- .++. .+. .+++.|++|.++-.|..+|.++.. .++++.+. +....
T Consensus 197 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~ 276 (394)
T 2ay1_A 197 ILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLN 276 (394)
T ss_dssp HHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHH
Confidence 378899999999998643221 1222 243 377999999997566666554431 23443332 22222
Q ss_pred HhcCCCCChHhHHHHHhcHHH----------HHHHHHHHHhHHHHHHHHHhcC
Q 027424 66 NAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l~t----------l~~R~~~~~~na~~la~~L~~~ 108 (223)
.....+.++...+.+.+.|+. +....++..++...+.+.|++.
T Consensus 277 ~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (394)
T 2ay1_A 277 RQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDL 329 (394)
T ss_dssp HTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222222356555555555542 2233355566667777777765
No 196
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.20 E-value=3.8e-06 Score=75.97 Aligned_cols=172 Identities=17% Similarity=0.266 Sum_probs=94.6
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCCh
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 74 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp 74 (223)
+|++||++||+|+.+... +.+.......|++ |++|.+++ +-.+|+ ++++ +++.+.+...........+|
T Consensus 256 l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~-G~~iG~-v~~~-~~~~~~~~~~~~~~t~~~~~ 330 (451)
T 3oks_A 256 WCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI--VTAKGIAG-GLPLSA-VTGR-AEIMDSPHVSGLGGTYGGNP 330 (451)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCEE-EEEE-HHHHTCSCTTSBCCSSSSCH
T ss_pred HHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee--eehhhhhC-CcceEE-EEEC-HHHHhhhcCCCcCCCCCCCH
Confidence 478999999999997421 1112222335766 78899987 666665 5454 45544433211112223577
Q ss_pred HhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC----
Q 027424 75 FDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG---- 144 (223)
Q Consensus 75 ~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~---- 144 (223)
..+...+..|+.+.. ..++..++...+.+.|+ .+|.+..| ++.|.++.|++.
T Consensus 331 ~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~G~~~~~~~~~~~~ 392 (451)
T 3oks_A 331 IACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDV------------------RGRGAMIAMELVKAGT 392 (451)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEBSTTS
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE------------------EEeeEEEEEEEecCcc
Confidence 777777777775432 23444555555555444 56655433 236788889872
Q ss_pred ---CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHH
Q 027424 145 ---SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 217 (223)
Q Consensus 145 ---~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~A 217 (223)
+...+.+|.+.+. ..++-+ .|. |...+.+||+..+ |+.+.+++-|+++
T Consensus 393 ~~~~~~~~~~~~~~l~--~~Gv~v--------~~~---------------~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 447 (451)
T 3oks_A 393 TEPDADLTKALCAGAH--AAGVIV--------LSC---------------GTYGNVVRFLPPLSIGDDLLNEGLDVLEEV 447 (451)
T ss_dssp CCBCHHHHHHHHHHHH--HTTEEC--------EEE---------------CTTSCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH--hCCcEE--------ecC---------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 2334455554431 111110 111 0113579997654 4566677777777
Q ss_pred Hhc
Q 027424 218 LRT 220 (223)
Q Consensus 218 l~~ 220 (223)
|+.
T Consensus 448 l~~ 450 (451)
T 3oks_A 448 LRG 450 (451)
T ss_dssp HHC
T ss_pred Hhh
Confidence 754
No 197
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=98.13 E-value=4.6e-06 Score=80.45 Aligned_cols=101 Identities=14% Similarity=0.099 Sum_probs=67.8
Q ss_pred ccccCCEEEEecCCCCCCC-------cCcccCC--CcEE---EecccccccCCcccceeEEEecChhHHHHHHHHHHhcC
Q 027424 2 AHAHGALLLVDNSIMSPVL-------SRPLELG--ADIV---MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 69 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~-------~~pl~~G--ADiv---v~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g 69 (223)
|++++ ++||++|++++. ..++..| +|++ ++|+||+++| .+++|+++++++...+++.......+
T Consensus 322 a~~~~--livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~g--ltqgs~i~v~~~i~~~~~~~~~~~~~ 397 (715)
T 3n75_A 322 LDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAA--FSQASMIHVKGDVNEETFNEAYMMHT 397 (715)
T ss_dssp CCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSC--CTTCEEEEEESCCCHHHHHHHHHHTS
T ss_pred hCcCc--EEEccccccccccCCccccccccccCcCCCEEEEEEecccccccC--CCCeeEEEeCchhhHHHHHHHHHhhc
Confidence 44443 799999987642 2355555 7877 9999999994 46899998876533344555555555
Q ss_pred CCCChHhHHHHHhcHHHH---------HHHHHHHHhHHHHHHHHHhcCC
Q 027424 70 SGLAPFDCWICLRGVKTM---------ALRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl---------~~R~~~~~~na~~la~~L~~~p 109 (223)
+.|| .|+++.+++.. ..++++..+++..+.+.|++.+
T Consensus 398 -STSp--sy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 398 -TTSP--HYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp -CSSC--CHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCc--hHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455 55666666532 2345777888888888887654
No 198
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=98.12 E-value=9.3e-06 Score=71.72 Aligned_cols=105 Identities=15% Similarity=0.133 Sum_probs=71.7
Q ss_pred CccccCCEEEEecCCCCCCCcCcc---c-CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcC-------
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPL---E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG------- 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl---~-~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g------- 69 (223)
+|+++|+++|+|++++.+..+... . .++|+..-|.+|.++|.. +|+++++++++.+++........
T Consensus 144 l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~---~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 220 (394)
T 1o69_A 144 ICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSG---GGMLIGKNKEKIEKARFYSTQARENCLHYE 220 (394)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSS---CEEEEESCHHHHHHHHHHTBTCCCSSSSCC
T ss_pred HHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCC---ceEEEECCHHHHHHHHHHHHhccccCcccc
Confidence 478999999999999744322211 1 135666666699998653 77787766677666655422110
Q ss_pred CC-------CChHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcC
Q 027424 70 SG-------LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 70 ~~-------~sp~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~ 108 (223)
.. +++..+.+.+..++.+..++++..+++..+.+.|++.
T Consensus 221 ~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~ 266 (394)
T 1o69_A 221 HLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY 266 (394)
T ss_dssp CSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 00 4556666666567778888899999999999999886
No 199
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=98.12 E-value=3.6e-05 Score=68.52 Aligned_cols=177 Identities=15% Similarity=0.175 Sum_probs=91.2
Q ss_pred CccccCCEEEEecCCCCC------CCcCcc-cCCCcEEEecccccccCCc-ccceeEEEecChhHHHHHHHH----HHhc
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPL-ELGADIVMHSATKFIAGHS-DVMAGVLAVKGERLAKELYFL----QNAE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl-~~GADivv~S~tK~l~G~~-d~~~G~v~~~~~~~~~~l~~~----~~~~ 68 (223)
+|+++|++||+|+++..- +..... ....|++ +++|.+++ + -.+|+ ++. ++++.+.+... ....
T Consensus 220 l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~--t~sK~l~~-G~~r~G~-~~~-~~~i~~~~~~~~~~~~~~~ 294 (430)
T 3i4j_A 220 ICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIA--VLGKGLAA-GYAPLAG-LLA-APQVYETVMGGSGAFMHGF 294 (430)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEE--EECGGGTT-TSSCCEE-EEE-CHHHHHHHHHTTCBCCCCC
T ss_pred HHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEE--EEcccccC-CccccEE-EEE-CHHHHHHHhccCCcccccC
Confidence 478999999999997421 111111 2235666 57799986 5 55654 545 45666655432 1111
Q ss_pred CCCCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 69 GSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
....+|..+...+..|+.+.. ..++..++...+.+.|+ ++|.+..+. +.|.++.|+
T Consensus 295 t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------~~g~~~~~~ 356 (430)
T 3i4j_A 295 TYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVR------------------GTGLLLGVV 356 (430)
T ss_dssp TTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE------------------EETTEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE------------------EEEEEEEEE
Confidence 123467666666667765422 23455555555555544 566654332 257788888
Q ss_pred eCCH---------HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHH
Q 027424 143 TGSL---------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVND 209 (223)
Q Consensus 143 ~~~~---------~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~d 209 (223)
+.+. +.+.+|.+.+. ..++- ..|.... ..|..++.+||+++ -|+.+.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~l~--~~Gv~--------v~~~~~~----------~~~~~~~~iRi~~~~~~t~e~i~~ 416 (430)
T 3i4j_A 357 LGDLATGQAFETPGIASRIGAAAL--KRGLI--------TYPGSGA----------EPNGRGDHLLLGPPLSITAAEVDG 416 (430)
T ss_dssp EC------------CHHHHHHHHH--HTTEE--------CC---------------------CEEEECCCTTCCHHHHHH
T ss_pred eccccccCCCccHHHHHHHHHHHH--hCCCE--------EEecccc----------cCCCCCCEEEEECCCCCCHHHHHH
Confidence 7421 11233433331 11111 1111000 00123578999966 356777
Q ss_pred HHHHHHHHHhc
Q 027424 210 LISDLDKALRT 220 (223)
Q Consensus 210 L~~dl~~Al~~ 220 (223)
+++-|+++|+.
T Consensus 417 ~l~~l~~~l~~ 427 (430)
T 3i4j_A 417 LLALLAGALED 427 (430)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888887764
No 200
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=98.08 E-value=4.4e-06 Score=74.98 Aligned_cols=102 Identities=15% Similarity=0.204 Sum_probs=61.7
Q ss_pred CccccCCEEEEecCCCCCCCc-C--c---ccCCCcEEEecccccccCCc-ccceeEEEecChhHHHHHHHHHH-------
Q 027424 1 MAHAHGALLLVDNSIMSPVLS-R--P---LELGADIVMHSATKFIAGHS-DVMAGVLAVKGERLAKELYFLQN------- 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~-~--p---l~~GADivv~S~tK~l~G~~-d~~~G~v~~~~~~~~~~l~~~~~------- 66 (223)
+|+++|++||+|+++...... . + +....|++ |++|.++| + ..+|+ ++++ +++.+.+.....
T Consensus 248 l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~~G~-~~~~-~~~~~~l~~~~~~~~~~~~ 322 (449)
T 3a8u_X 248 ICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN-GAIPMGA-VIAS-TEIYQTFMNQPTPEYAVEF 322 (449)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCCEE-EEEE-HHHHHHHHTCSSCTTSCSS
T ss_pred HHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC-CCCceEE-EEEC-HHHHHHhhccCcccccccc
Confidence 478999999999998421111 1 1 12246876 88899986 4 45665 4454 456555542100
Q ss_pred hcC--CCCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc
Q 027424 67 AEG--SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 67 ~~g--~~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~ 107 (223)
..+ ...+|..+......++.+.. ..++..++...+.+.|++
T Consensus 323 ~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 367 (449)
T 3a8u_X 323 PHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHG 367 (449)
T ss_dssp CCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 112 12466666666777776542 456667777778777776
No 201
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=98.05 E-value=1.8e-05 Score=71.14 Aligned_cols=120 Identities=22% Similarity=0.290 Sum_probs=67.2
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCc-ccceeEEEecChhHHHHHHH---HHH-hcC
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHS-DVMAGVLAVKGERLAKELYF---LQN-AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~-d~~~G~v~~~~~~~~~~l~~---~~~-~~g 69 (223)
+|+++|++||+|+.+... +.+.......|++ +++|.+++ + -.+|+ ++++ +++.+.+.. ... ..+
T Consensus 244 l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~-G~~~ig~-~~~~-~~i~~~~~~~~~~~~~~~~ 318 (452)
T 3n5m_A 244 TCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDII--TMAKGITS-AYLPLSA-TAVK-REIYEAFKGKGEYEFFRHI 318 (452)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TSSCCEE-EEEE-HHHHGGGCSSSTTCSCCCC
T ss_pred HHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEE--eecccccC-CCcceEE-EEEC-HHHHHHHhhccCCCCcccc
Confidence 478999999999996421 1111122235665 57899987 6 56655 5454 455554421 010 112
Q ss_pred --CCCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHH----hcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 70 --SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFL----ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 70 --~~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L----~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
...+|..+...+..|+.+.. ..++..++...+.+.| +++|.+..+. +.|.++.|
T Consensus 319 ~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~------------------~~g~~~~i 380 (452)
T 3n5m_A 319 NTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIR------------------GKGLLVGI 380 (452)
T ss_dssp CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE------------------ESSSCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE------------------EEEEEEEE
Confidence 23467767767777775432 2345555555555554 4566554432 35777778
Q ss_pred Ee
Q 027424 142 LT 143 (223)
Q Consensus 142 ~~ 143 (223)
++
T Consensus 381 ~~ 382 (452)
T 3n5m_A 381 EL 382 (452)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 202
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=98.05 E-value=5.5e-05 Score=67.82 Aligned_cols=112 Identities=24% Similarity=0.327 Sum_probs=61.0
Q ss_pred CccccCCEEEEecC-CCCCCCcCcccCCCcEEEecccc-----cccCCcccceeEEEecChhHHHHHH------------
Q 027424 1 MAHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATK-----FIAGHSDVMAGVLAVKGERLAKELY------------ 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT-~~s~~~~~pl~~GADivv~S~tK-----~l~G~~d~~~G~v~~~~~~~~~~l~------------ 62 (223)
+||++|++++||.. .+-+....|-++|+|+++.|.+| .++|+ -+|++.+++ ++.+.+.
T Consensus 220 la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~~~Gp---~~G~l~~~~-~~~~~l~~~~~g~~~~~~~ 295 (438)
T 1wyu_A 220 AAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGP---HFGFLATKK-AFVRQLPGRLVSETVDVEG 295 (438)
T ss_dssp HHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCCGGGCS---CCEEEEECG-GGGGGCCSCCEEEEEBTTS
T ss_pred HHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCCccCCCC---CeeEEEEcH-HHHHhCCCceeccccccCC
Confidence 47899999997743 21222234556799999999444 34454 256776665 3433221
Q ss_pred -------------HHHHhcCCC-C---ChHhH---HHHHhcH--HHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcC
Q 027424 63 -------------FLQNAEGSG-L---APFDC---WICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 117 (223)
Q Consensus 63 -------------~~~~~~g~~-~---sp~da---~ll~~~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 117 (223)
..+...+.. . ....+ +..+..+ +.+....++..+++..+.+.|++.|++ ++..|
T Consensus 296 ~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~ 371 (438)
T 1wyu_A 296 RRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGV-RPFTP 371 (438)
T ss_dssp CEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTC-EECSC
T ss_pred CcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EECCC
Confidence 011111211 1 11111 1001112 224455677788999999999998876 44433
No 203
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=98.02 E-value=0.00037 Score=62.53 Aligned_cols=105 Identities=16% Similarity=0.185 Sum_probs=69.4
Q ss_pred CCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCChHhHHHHHhcH
Q 027424 6 GALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 84 (223)
Q Consensus 6 g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~sp~da~ll~~~l 84 (223)
++..++|+++-.+. ....+..+.+|++.|+||+++.++..+|. ++++++++.+++...........++...+.+...|
T Consensus 219 ~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~-~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L 297 (427)
T 2hox_A 219 GCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFGW-ALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVL 297 (427)
T ss_dssp TCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEE-EEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHH
T ss_pred CCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCCceEEE-EEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHh
Confidence 45678898764321 11122347899999999999877877765 54655678777777665554456776555555555
Q ss_pred HHH---------------HHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 85 KTM---------------ALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 85 ~tl---------------~~R~~~~~~na~~la~~L~~~p~v 111 (223)
+.- ....++..++...+.+.|++.|.+
T Consensus 298 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 339 (427)
T 2hox_A 298 KEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRF 339 (427)
T ss_dssp HHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSE
T ss_pred hcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCc
Confidence 542 122356667788899999988765
No 204
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=98.01 E-value=3e-05 Score=69.02 Aligned_cols=165 Identities=15% Similarity=0.190 Sum_probs=94.3
Q ss_pred CccccCCEEEEecCCCCCC------CcCcccCCCcEEEecccccccCCc-ccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPV------LSRPLELGADIVMHSATKFIAGHS-DVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~------~~~pl~~GADivv~S~tK~l~G~~-d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|+++|+++|+|+++..-. .........|++ |++|.++| + -.+|+++ +++ ++. .+ ..........+
T Consensus 241 l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~-G~~riG~~~-~~~-~~~-~~-~~~~~~t~~~n 313 (419)
T 2eo5_A 241 LAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGG-GIMPIGATI-FRK-DLD-FK-PGMHSNTFGGN 313 (419)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TTSCCEEEE-EEG-GGC-CC-------CCCCC
T ss_pred HHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccC-CccceEEEE-Ech-Hhh-cC-CcccCCCCCCC
Confidence 4788999999999975211 011122345765 78999996 6 6666644 554 444 44 21111122346
Q ss_pred hHhHHHHHhcHHHHHHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC-CHHHHHHH
Q 027424 74 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHV 152 (223)
Q Consensus 74 p~da~ll~~~l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~-~~~~~~~f 152 (223)
|..+......++.+....++..++...+.+.|++. +..+ .+.|.++.|++. +..... |
T Consensus 314 ~~~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~--~~~~------------------~~~g~~~~i~~~~~~~~~~-~ 372 (419)
T 2eo5_A 314 ALACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL--ADDV------------------RGIGLAWGLEYNEKKVRDR-I 372 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--SSEE------------------EEETTEEEEECSCHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhe------------------EeeeEEEEEEEecCccHHH-H
Confidence 76666777777766555566777778888888764 2221 135778888883 222344 5
Q ss_pred HhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHhc
Q 027424 153 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 220 (223)
Q Consensus 153 ~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al~~ 220 (223)
.+.+. ..++- + .|. .++.+|||+++ |+.+.+++-|+++++.
T Consensus 373 ~~~l~--~~Gv~-------v-~~~-----------------~~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 373 IGESF--KRGLL-------L-LPA-----------------GRSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp HHHHH--HTTEE-------C-EEE-----------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--HCCCE-------E-ecC-----------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 55542 11111 0 111 14679998764 4566667777777654
No 205
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=97.95 E-value=5.9e-05 Score=69.90 Aligned_cols=53 Identities=9% Similarity=0.056 Sum_probs=36.2
Q ss_pred cc-ccCCEEEEecCCCCCCC-cCcc---cCCCcEEEecccccccCCcccceeEEEecCh
Q 027424 2 AH-AHGALLLVDNSIMSPVL-SRPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 55 (223)
Q Consensus 2 a~-~~g~~lvVDnT~~s~~~-~~pl---~~GADivv~S~tK~l~G~~d~~~G~v~~~~~ 55 (223)
|+ ++|+++|+|++++.... ..++ ..+.+|++.|+||+++.++..+|. ++++++
T Consensus 273 a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~-l~~~~~ 330 (533)
T 3f6t_A 273 VEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGV-IALNEK 330 (533)
T ss_dssp HHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEE-EEEESS
T ss_pred HHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEE-EEECcH
Confidence 56 68999999999864321 1111 123459999999999877777765 545554
No 206
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=97.94 E-value=5.5e-05 Score=67.28 Aligned_cols=102 Identities=17% Similarity=0.218 Sum_probs=58.8
Q ss_pred CccccCCEEEEecCCCC----CC--CcCcccCCCcEEEecccccccCCc-ccceeEEEecChhHHHHHHHHH--H-hcCC
Q 027424 1 MAHAHGALLLVDNSIMS----PV--LSRPLELGADIVMHSATKFIAGHS-DVMAGVLAVKGERLAKELYFLQ--N-AEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~~--~~~pl~~GADivv~S~tK~l~G~~-d~~~G~v~~~~~~~~~~l~~~~--~-~~g~ 70 (223)
+|+++|+++|+|++++. +. .+.......|++ |++|.++| + -.+|. ++++ +++.+.+.... . ..+.
T Consensus 234 l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-G~~~iG~-~~~~-~~~~~~l~~~~~~~~~~~~ 308 (429)
T 1s0a_A 234 ICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTG-GTMTLSA-TLTT-REVAETISNGEAGCFMHGP 308 (429)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-SSSCCEE-EEEC-HHHHHHHHTSTTSSCSCCC
T ss_pred HHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccC-CCccceE-EEeC-HHHHHHhhcCCCcccccCC
Confidence 47899999999999842 11 112223456876 67899986 4 45554 5454 45655543210 0 0121
Q ss_pred C--CChHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhc
Q 027424 71 G--LAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 71 ~--~sp~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~ 107 (223)
+ .+|..+......++.+. ...++..++...+.+.|++
T Consensus 309 t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 349 (429)
T 1s0a_A 309 TFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAP 349 (429)
T ss_dssp TTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGG
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 2 35655555556666542 2345666677777777775
No 207
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=97.91 E-value=6.5e-05 Score=67.82 Aligned_cols=122 Identities=18% Similarity=0.200 Sum_probs=70.8
Q ss_pred CccccCCEEEEecCCCCC-----CC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH---HHHhcCCC
Q 027424 1 MAHAHGALLLVDNSIMSP-----VL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF---LQNAEGSG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-----~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~---~~~~~g~~ 71 (223)
+|+++|++||+|+.+... ++ ........|+++ ++|.++|..-.+|+ +++ ++++.+.+.. ........
T Consensus 248 l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t--~sK~l~gg~~~lg~-v~~-~~~i~~~~~~~~~~~~~~t~~ 323 (459)
T 4a6r_A 248 ICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFT--AAKGLSSGYLPIGA-VFV-GKRVAEGLIAGGDFNHGFTYS 323 (459)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTSSCCEE-EEE-CHHHHHHHHHHCTTHHHHHHC
T ss_pred HHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeee--hhhhhcCCCCCccc-eee-CHHHHHHhhcCCCcccCCCCC
Confidence 478999999999997421 11 111122357764 66999875456655 545 4566666541 11111113
Q ss_pred CChHhHHHHHhcHHHHHH--HHHHHH-hHHHHHHHHH----hcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 72 LAPFDCWICLRGVKTMAL--RVEKQQ-DNAQKIAEFL----ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~~--R~~~~~-~na~~la~~L----~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
.+|..+...+..|+.+.. .+++.. ++...+.+.| +.+|.|..|. +.|.++.|++.
T Consensus 324 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~------------------~~g~~~~~~~~ 385 (459)
T 4a6r_A 324 GHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVR------------------GVGMVQAFTLV 385 (459)
T ss_dssp SCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEE------------------EETTEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE------------------EEEEEEEEEEe
Confidence 477777777777775532 234445 5555555555 5667654433 35778888873
No 208
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=97.89 E-value=7.6e-05 Score=66.36 Aligned_cols=102 Identities=15% Similarity=0.136 Sum_probs=57.4
Q ss_pred CccccCCEEEEecCCCCCCCc------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhc-C-CCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-G-SGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~-g-~~~ 72 (223)
+|+++|+++|+|+++..-... .......|++ |++|.+++ +..+|. ++++ +++.+.+....... + ...
T Consensus 232 l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G~~ig~-~~~~-~~~~~~~~~~~~~~~~t~~~ 306 (433)
T 1zod_A 232 KCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGA-GLPLAA-IVTS-AAIEERAHELGYLFYTTHVS 306 (433)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHT-TSSCEE-EEEC-HHHHHHHHHTTCCCCCTTTT
T ss_pred HHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEE--EecccccC-CCCeeE-EEEh-HHHHHhhccCCCCCCCCCCc
Confidence 478999999999998521111 1112234654 88899997 655554 5454 46666554311111 1 123
Q ss_pred ChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc
Q 027424 73 APFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~ 107 (223)
+|..+......++.+.. ..++..++...+.+.|++
T Consensus 307 ~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~ 343 (433)
T 1zod_A 307 DPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLD 343 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 66666656666665422 235555566666666654
No 209
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=97.88 E-value=5.5e-06 Score=73.92 Aligned_cols=102 Identities=15% Similarity=0.150 Sum_probs=59.6
Q ss_pred CccccCCEEEEecCCCC---C--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-hcC--CCC
Q 027424 1 MAHAHGALLLVDNSIMS---P--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEG--SGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s---~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-~~g--~~~ 72 (223)
+|+++|++||+|++++. + +.+.......|++ |++|.++| +..+ |+++++ +++.+.+..... ..+ ...
T Consensus 229 l~~~~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~--t~sK~~~~-G~~~-G~~~~~-~~~~~~l~~~~~~~~~~t~~~ 303 (429)
T 4e77_A 229 LCDEFGALLIIDEVMTGFRVALAGAQDYYHVIPDLT--CLGKIIGG-GMPV-GAFGGR-REVMNALAPTGPVYQAGTLSG 303 (429)
T ss_dssp HHHHHTCEEEEEETTTBTTTBTTCHHHHTTCCCSEE--EEEGGGGT-TSCC-EEEEEC-HHHHTTBTTTSSBCC--CCCC
T ss_pred HHHHcCCEEEEeccccCcccCcchHHHhcCCCCCee--eecccccC-CCCe-EEEEEC-HHHHHHhccCCCccccCCCCC
Confidence 47899999999999861 1 1112222345765 78899995 5444 556554 455544332100 112 135
Q ss_pred ChHhHHHHHhcHHHH--HHHHHHHHhHHHHHHHHHhc
Q 027424 73 APFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 73 sp~da~ll~~~l~tl--~~R~~~~~~na~~la~~L~~ 107 (223)
+|..+......|+.+ ...+++..++...+.+.|++
T Consensus 304 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 340 (429)
T 4e77_A 304 NPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRH 340 (429)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 777777777777765 23345566666666666654
No 210
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=97.88 E-value=3.1e-05 Score=70.31 Aligned_cols=168 Identities=14% Similarity=0.138 Sum_probs=94.4
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH-HH--hcCC-
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QN--AEGS- 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~-~~--~~g~- 70 (223)
+|+++|++||+|+.+..- +.+.-.....|++ +++|.++|.--.+|+ ++++ +++.+.+... .. ..+.
T Consensus 263 l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~gG~~~lG~-v~~~-~~i~~~~~~~~~~~~~~~~t 338 (457)
T 3tfu_A 263 ICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTGGYLSLAA-TLCT-ADVAHTISAGAAGALMHGPT 338 (457)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCCEE-EEEE-HHHHHHHHHSSSCSCCCCCT
T ss_pred HHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE--EEChhhhCCCcceEE-EEEc-HHHHHHhhccCCCceeEecC
Confidence 478999999999996421 1111122346777 888999873234554 5454 4565555311 00 1222
Q ss_pred -CCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc---CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 71 -GLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 71 -~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~---~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
..+|..+...+..|+.+.. ..++..++...+.+.|++ +|.|..| ++.|.++.|++.
T Consensus 339 ~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v------------------r~~G~~~~i~l~ 400 (457)
T 3tfu_A 339 FMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDV------------------RVCGAIGVIECD 400 (457)
T ss_dssp TTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEE------------------EECSSCEEEEES
T ss_pred CCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeee------------------ecCCeEEEEEEC
Confidence 3467777777777776532 245556666677777764 3444332 235788888884
Q ss_pred CHHHHHHHHhhc---CcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHH
Q 027424 145 SLALSKHVVETT---KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKA 217 (223)
Q Consensus 145 ~~~~~~~f~~~l---~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~dl~~A 217 (223)
+...+.+|.+.+ +++- .| ..+.+||+.. -|+.+.+++-|+++
T Consensus 401 ~~~~~~~~~~~l~~~Gv~v-------------~~------------------~~~~lRi~p~~~~t~eei~~~l~~L~~~ 449 (457)
T 3tfu_A 401 RPVDLAVATPAALDRGVWL-------------RP------------------FRNLVYAMPPYICTPAEITQITSAMVEV 449 (457)
T ss_dssp SCCCHHHHHHHHHHTTEEC-------------CC------------------BTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHCCeEE-------------Ee------------------cCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 221122333322 2220 11 1256899743 35678888888888
Q ss_pred HhcC
Q 027424 218 LRTG 221 (223)
Q Consensus 218 l~~~ 221 (223)
++..
T Consensus 450 l~~~ 453 (457)
T 3tfu_A 450 ARLV 453 (457)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8754
No 211
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=97.86 E-value=5.3e-05 Score=68.41 Aligned_cols=122 Identities=15% Similarity=0.190 Sum_probs=68.4
Q ss_pred CccccCCEEEEecCCCCC-----CC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHH----HH-hcC
Q 027424 1 MAHAHGALLLVDNSIMSP-----VL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----QN-AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-----~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~----~~-~~g 69 (223)
+|+++|++||+|+.+... ++ ..-...-.|++ +++|.++|..-.+|+ ++++ +++.+.+... .. ..+
T Consensus 250 l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~l~gG~~~lg~-v~~~-~~i~~~~~~~~~~~~~~~~~ 325 (460)
T 3gju_A 250 VLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI--TIAKGLTSAYAPLSG-VIVA-DRVWQVLVQGSDKLGSLGHG 325 (460)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--EECGGGTTTSSCCEE-EEEE-HHHHHHHHHHHHHHCSCSCC
T ss_pred HHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee--eeehhhcCCCCCeEE-EEEC-HHHHHHHhcccccccccccC
Confidence 478999999999997421 11 11112234666 567999873245555 5454 4566655421 11 112
Q ss_pred --CCCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHH----HHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 70 --SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAE----FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 70 --~~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~----~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
...+|..+...+..|+.+.. .+++..++...+.+ .++++|.+..|. +.|.++.|
T Consensus 326 ~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~------------------~~g~~~~~ 387 (460)
T 3gju_A 326 WTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVR------------------GDGMLAAV 387 (460)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE------------------EETTEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe------------------eeeEEEEE
Confidence 23467767777777775421 23444445444444 445677664443 35778888
Q ss_pred EeC
Q 027424 142 LTG 144 (223)
Q Consensus 142 ~~~ 144 (223)
++.
T Consensus 388 ~~~ 390 (460)
T 3gju_A 388 EFV 390 (460)
T ss_dssp EEC
T ss_pred EEc
Confidence 873
No 212
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=97.79 E-value=3.2e-05 Score=69.59 Aligned_cols=121 Identities=17% Similarity=0.211 Sum_probs=67.5
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCc-ccceeEEEecChhHHHHHHH-------HHH
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHS-DVMAGVLAVKGERLAKELYF-------LQN 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~-d~~~G~v~~~~~~~~~~l~~-------~~~ 66 (223)
+|++||++||+|+.+..- +.+.-...-.|++ +++|.++| + ..+|+ ++.+ +++.+.+.. ...
T Consensus 240 l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~--t~sK~l~~-G~~~ig~-v~~~-~~~~~~~~~~~~~~~~~~~ 314 (448)
T 3dod_A 240 LCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLM--AAGKGITG-GYLPIAV-TFAT-EDIYKAFYDDYENLKTFFH 314 (448)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEE-EEEE-HHHHHTTCSCGGGCCCCCC
T ss_pred HHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEE--EecccccC-CcCceEE-EEEC-HHHHHHhhhccccCCcccc
Confidence 478999999999996421 1111122235665 56799986 5 35554 5454 455554422 101
Q ss_pred hcCCCCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHh---cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 67 AEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA---SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 67 ~~g~~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~---~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
......+|..+...+..|+.+.. ..++..++...+.+.|+ .+|.+..+ ++.|.++.|
T Consensus 315 ~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~------------------~~~g~~~~~ 376 (448)
T 3dod_A 315 GHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDI------------------RQLGFMCGA 376 (448)
T ss_dssp CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEE------------------EEETTEEEE
T ss_pred cCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EeeeEEEEE
Confidence 11123467777777777775532 24555555555555554 45544332 235778888
Q ss_pred EeC
Q 027424 142 LTG 144 (223)
Q Consensus 142 ~~~ 144 (223)
++.
T Consensus 377 ~~~ 379 (448)
T 3dod_A 377 ELV 379 (448)
T ss_dssp EEC
T ss_pred EEc
Confidence 873
No 213
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=97.78 E-value=1.1e-05 Score=72.14 Aligned_cols=101 Identities=18% Similarity=0.218 Sum_probs=61.0
Q ss_pred CccccCCEEEEecCCCCCCCcCc------ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-hcCC--C
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGS--G 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p------l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-~~g~--~ 71 (223)
+|+++|++||+|++++ ++...+ +....|++ |++|.+++ +.. .|+++++ +++.+.+..... ..+. .
T Consensus 232 l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~-~G~v~~~-~~~~~~l~~~~~~~~~~t~~ 305 (434)
T 2epj_A 232 LSRESGALLILDEVVT-GFRLGLEGAQGYFNIEGDII--VLGKIIGG-GFP-VGAVAGS-REVMSLLTPQGKVFNAGTFN 305 (434)
T ss_dssp HHHHHTCEEEEEETTT-TTTSSTTHHHHHHTCCCSEE--EEEGGGGT-TSS-CEEEEEC-HHHHTTBTTTSSBCCCCTTT
T ss_pred HHHHcCCEEEEEcchh-ceeCCcchhhHHhCCCCCee--eecchhcC-Ccc-eeeeeec-HHHHHhhccCCCcccCCCCC
Confidence 4789999999999986 332111 12246765 88899997 545 4556555 455444322100 1222 3
Q ss_pred CChHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhc
Q 027424 72 LAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~ 107 (223)
.+|..+......|+.+. ...++..++...+.+.|++
T Consensus 306 ~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (434)
T 2epj_A 306 AHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASE 343 (434)
T ss_dssp TCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 56777777777777654 2346666667777777765
No 214
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=97.75 E-value=6.9e-05 Score=67.76 Aligned_cols=171 Identities=19% Similarity=0.275 Sum_probs=91.4
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 73 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~s 73 (223)
+|++||++||+|+.+.. +. +.....-.|++ +++|.+++ +-.+|+ ++++ +++.+.+...........+
T Consensus 254 l~~~~~~llI~DEv~~g-~g~~g~~~a~~~~~~~pdi~--t~sK~~~~-G~~~G~-~~~~-~~i~~~~~~~~~~~t~~~~ 327 (453)
T 4ffc_A 254 WASENGVVFIADEVQTG-FARTGAWFASEHEGIVPDIV--TMAKGIAG-GMPLSA-VTGR-AELMDAVYAGGLGGTYGGN 327 (453)
T ss_dssp HHHHHTCEEEEECTTTT-TTTTSSSSTHHHHTCCCSEE--EECGGGGT-TSSCEE-EEEE-HHHHTTSCTTSSCCSSSSC
T ss_pred HHHHcCCEEEEecCccC-CCcccccchhhhcCCCcchH--hhhhhhcC-CcCeEE-EEEC-HHHHhhhcccCcCCCCCcC
Confidence 47899999999999742 21 11111224554 67899987 666655 5454 4554443321111122346
Q ss_pred hHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHH----hcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC---
Q 027424 74 PFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFL----ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--- 144 (223)
Q Consensus 74 p~da~ll~~~l~tl~~--R~~~~~~na~~la~~L----~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~--- 144 (223)
|..+...+..|+.+.. ..++..++...+.+.| +.+|.+..|. +.|.++.|++.
T Consensus 328 ~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~------------------~~g~~~~~~~~~~~ 389 (453)
T 4ffc_A 328 PVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEVR------------------GRGAMLAIEIVKPG 389 (453)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEE------------------EETTEEEEEEBCTT
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE------------------eeceEEEEEEecCc
Confidence 7666666666665421 2344444444444444 4567554332 35788888872
Q ss_pred ----CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHH
Q 027424 145 ----SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDK 216 (223)
Q Consensus 145 ----~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~ 216 (223)
+...+.+|.+.+. ..++-+ .|. |..++.+||+..+ |+.+.+++-|++
T Consensus 390 ~~~~~~~~~~~~~~~l~--~~Gv~v--------~~~---------------~~~~~~iRi~~~~~~t~e~i~~~l~~l~~ 444 (453)
T 4ffc_A 390 TLEPDAALTKSIAAEAL--SQGVLI--------LTC---------------GTFGNVIRLLPPLVIGDDLLDEGITALSD 444 (453)
T ss_dssp SCCBCHHHHHHHHHHHH--HTTEEC--------CEE---------------CTTSCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHH--hCCCEE--------ecC---------------CCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 2334555554431 111111 111 1123679997654 456677777777
Q ss_pred HHhc
Q 027424 217 ALRT 220 (223)
Q Consensus 217 Al~~ 220 (223)
+++.
T Consensus 445 ~l~~ 448 (453)
T 4ffc_A 445 IIRA 448 (453)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7763
No 215
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=97.72 E-value=0.00027 Score=64.39 Aligned_cols=121 Identities=21% Similarity=0.262 Sum_probs=71.3
Q ss_pred CccccCCEEEEecCCCCC-----C-CcC-cccCCCcEEEecccccccCCc-ccceeEEEecChhHHHHHHHHH---H--h
Q 027424 1 MAHAHGALLLVDNSIMSP-----V-LSR-PLELGADIVMHSATKFIAGHS-DVMAGVLAVKGERLAKELYFLQ---N--A 67 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-----~-~~~-pl~~GADivv~S~tK~l~G~~-d~~~G~v~~~~~~~~~~l~~~~---~--~ 67 (223)
+|+++|++||+|+.+..- + .+. -...-.||++ ++|.++| + --+|+ +++ ++++.+.+.... . .
T Consensus 250 lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t--~sK~l~~-G~~plg~-v~~-~~~i~~~~~~~~~~~~~~~ 324 (476)
T 3i5t_A 250 ICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIIT--FAKGVTS-GYVPLGG-LAI-SEAVLARISGENAKGSWFT 324 (476)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEE--ECGGGGT-TSSCCEE-EEE-CHHHHHTTSGGGCTTCEEC
T ss_pred HHHHcCCEEEEEecccCCccccCceeeecccCCCcchhh--hhhhhcC-CCcCeEE-EEE-CHHHHHHHhcCCccccccc
Confidence 478999999999997421 1 011 1222357775 6699987 4 45554 545 456655443210 0 1
Q ss_pred cC--CCCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc---CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEE
Q 027424 68 EG--SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 140 (223)
Q Consensus 68 ~g--~~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~---~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~s 140 (223)
.+ ...+|..+...+..|+.+.. ..++..++...+.+.|+. +|.|..| ++.|.++.
T Consensus 325 ~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v------------------~~~G~~~~ 386 (476)
T 3i5t_A 325 NGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAET------------------RSVGLVGC 386 (476)
T ss_dssp CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEE------------------EEETTEEE
T ss_pred ccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EecCceeE
Confidence 12 23467777777777776532 246666777777777764 4444332 34688888
Q ss_pred EEeC
Q 027424 141 FLTG 144 (223)
Q Consensus 141 f~~~ 144 (223)
|++.
T Consensus 387 i~~~ 390 (476)
T 3i5t_A 387 VQCL 390 (476)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8883
No 216
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=97.72 E-value=0.002 Score=57.35 Aligned_cols=138 Identities=17% Similarity=0.181 Sum_probs=78.3
Q ss_pred CccccCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhHH------HH-H--HHHHH--hc
Q 027424 1 MAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA------KE-L--YFLQN--AE 68 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~------~~-l--~~~~~--~~ 68 (223)
+|+++|++++||.+-+-+. ..+.-++| +++-|.+|+++..+ .|++..+++.+. .. + ..... ..
T Consensus 172 i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K~~gp~G---~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~ 246 (377)
T 3e77_A 172 IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQKNVGSAG---VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSL 246 (377)
T ss_dssp CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGGTTSCTT---CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTC
T ss_pred hhccCCCEEEEEcccccCCCCCchhhcC--EEEEecccccCCCc---cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCC
Confidence 4788999999999865432 22333344 68899999995333 345556653210 00 1 11111 11
Q ss_pred CCCCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 69 GSGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 69 g~~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
..+.+-...+.+..+++.+ ..+.++..+.+..+.+.|++.|.+. + .|. .+.+ ..+.+++|.
T Consensus 247 ~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~-~-~~~---~~~~--------rs~~ivsf~ 313 (377)
T 3e77_A 247 YNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY-V-CPV---EPQN--------RSKMNIPFR 313 (377)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSE-E-CCS---CGGG--------BCSSEEEEE
T ss_pred CCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCce-e-cCC---CHHH--------cCCcEEEEE
Confidence 1233445566666677754 3455677778888888998888753 2 231 1111 135679999
Q ss_pred eCC----HHHHHHHHhhc
Q 027424 143 TGS----LALSKHVVETT 156 (223)
Q Consensus 143 ~~~----~~~~~~f~~~l 156 (223)
+.+ .+....|++.+
T Consensus 314 ~~~~~~~~~~~~~~l~~l 331 (377)
T 3e77_A 314 IGNAKGDDALEKRFLDKA 331 (377)
T ss_dssp ESSTTCCHHHHHHHHHHH
T ss_pred cCCCCCchhHHHHHHHHH
Confidence 853 32224566654
No 217
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=97.70 E-value=0.00021 Score=65.17 Aligned_cols=122 Identities=16% Similarity=0.181 Sum_probs=71.4
Q ss_pred CccccCCEEEEecCCCCC-----CC-cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCC--CC
Q 027424 1 MAHAHGALLLVDNSIMSP-----VL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS--GL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-----~~-~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~--~~ 72 (223)
+|+++|++||+|+.+... ++ +.....-.|+++ ++|.++|..--+|+ ++++ +++.+.+....-..+. ..
T Consensus 252 l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t--~sK~l~gg~~plG~-v~~~-~~i~~~~~~~~~~~~~t~~~ 327 (472)
T 3hmu_A 252 ICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMT--IAKGLSSGYAPIGG-SIVC-DEVAHVIGKDEFNHGYTYSG 327 (472)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--ECGGGTTTSSCCEE-EEEE-HHHHHHHTTSCBCCCCTTTT
T ss_pred HHHHcCCEEEEEccccCCcccCccchhHHhCCCCceee--echhhhcCCcceEE-EEEC-HHHHHhcccCCccccCCCCC
Confidence 478999999999997421 11 111222367775 56999875455655 4454 4565555210001222 24
Q ss_pred ChHhHHHHHhcHHHHH--HHHHHHH-hHHHHHHHHHhc---CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 73 APFDCWICLRGVKTMA--LRVEKQQ-DNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 73 sp~da~ll~~~l~tl~--~R~~~~~-~na~~la~~L~~---~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
+|..+...+..|+.+. ...++.. ++...+.+.|+. +|.|..| ++.|.++.|++.
T Consensus 328 np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v------------------r~~G~~~~i~~~ 387 (472)
T 3hmu_A 328 HPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEA------------------KIVGMMASIALT 387 (472)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE------------------EEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EecCceEEEEEe
Confidence 6777777777777653 2245556 667777777754 4544333 246888889884
No 218
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=97.63 E-value=8.9e-05 Score=65.91 Aligned_cols=99 Identities=17% Similarity=0.164 Sum_probs=59.9
Q ss_pred cccCCEEEEecCCCCCCCcCc------ccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-hcCC--CCC
Q 027424 3 HAHGALLLVDNSIMSPVLSRP------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGS--GLA 73 (223)
Q Consensus 3 ~~~g~~lvVDnT~~s~~~~~p------l~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-~~g~--~~s 73 (223)
+++|++||+|++++ ++...+ +....|++ |++|.++| +..+ |+++++ +++.+.+..... ..+. ..+
T Consensus 229 ~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~-G~~~~~-~~~~~~~~~~~~~~~~~t~~~~ 302 (424)
T 2e7u_A 229 KAYGVLLIADEVMT-GFRLAFGGATELLGLKPDLV--TLGKILGG-GLPA-AAYAGR-REIMEKVAPLGPVYQAGTLSGN 302 (424)
T ss_dssp GGGTCEEEEECTTT-TTTSSTTHHHHHHTCCCSEE--EECGGGGT-TSSC-EEEEEC-HHHHTTBTTTSSBCCCCTTCSC
T ss_pred HHcCCEEEEecCcc-ccccchhHHHHHhCCCcchh--hhhhhhhC-Ccce-EEEEEc-HHHHhhhcccCCcccCCCCCCC
Confidence 78999999999986 332111 11236765 88999997 5554 556554 455544432110 1221 346
Q ss_pred hHhHHHHHhcHHHHHH---HHHHHHhHHHHHHHHHhc
Q 027424 74 PFDCWICLRGVKTMAL---RVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 74 p~da~ll~~~l~tl~~---R~~~~~~na~~la~~L~~ 107 (223)
|..+......++.+.. ..++..++...+.+.|++
T Consensus 303 ~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~ 339 (424)
T 2e7u_A 303 PLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKE 339 (424)
T ss_dssp HHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 7666667777766533 456667777777777765
No 219
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=97.62 E-value=0.00017 Score=65.89 Aligned_cols=171 Identities=18% Similarity=0.193 Sum_probs=89.5
Q ss_pred CccccCCEEEEecCCCC------CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCC--C
Q 027424 1 MAHAHGALLLVDNSIMS------PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--L 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s------~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~--~ 72 (223)
+|++||+++|+|+.... .+.+.-...-.||++-+ |.++|. --+++ ++.++ ++.+.+.. ...|.+ -
T Consensus 255 lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~lggg-~P~~a-v~~~~-~i~~~~~~--~~~~~Tf~g 327 (456)
T 4atq_A 255 WAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMA--KGIAGG-LPLSA-ITGRA-DLLDAVHP--GGLGGTYGG 327 (456)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTT-SSCEE-EEEEH-HHHTTSCT--TSSCCSSSS
T ss_pred HHhhcCCceEecccccccCCccccccccccCCCCchhhhh--hcccCc-CCcee-eEecH-HHHhcccc--cCCCCCCCC
Confidence 48999999999998632 12222222336998765 888763 44544 54553 44333221 112222 2
Q ss_pred ChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHHHh----c-----CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 73 APFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLA----S-----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 73 sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~L~----~-----~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
+|..|...+..|+.+... +++..+....+.+.|+ + ||.|..|+ |.|-|+.|
T Consensus 328 npla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VR------------------G~Gl~~gi 389 (456)
T 4atq_A 328 NPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIR------------------GRGAMLAI 389 (456)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEE------------------EETTEEEE
T ss_pred ChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEee------------------ecceEEEE
Confidence 677777777777766321 1222222222222222 2 35555554 57889999
Q ss_pred EeC-------CHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCCHHHH
Q 027424 142 LTG-------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDL 210 (223)
Q Consensus 142 ~~~-------~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd~~dL 210 (223)
++. +.+.++++.+.+. ..|.-+ .+ .|...+.|||+ +.-|+.++.
T Consensus 390 el~~~~~~~~~~~~~~~v~~~~~--~~Gvl~--------~~---------------~g~~~~~irl~PpL~it~~~id~~ 444 (456)
T 4atq_A 390 ELVQPGSKEPNAELTKAVAAACL--KEGVII--------LT---------------CGTYGNVIRLLPPLVISDELLIDG 444 (456)
T ss_dssp EEBCTTSCCBCHHHHHHHHHHHH--HTTEEC--------EE---------------ECTTSCEEEECCCTTCCHHHHHHH
T ss_pred EEecCCCCCcCHHHHHHHHHHHH--HCCCEE--------Ee---------------cCCCCCEEEEECCCCCCHHHHHHH
Confidence 982 2233445544331 111100 00 01122445554 445778899
Q ss_pred HHHHHHHHhcC
Q 027424 211 ISDLDKALRTG 221 (223)
Q Consensus 211 ~~dl~~Al~~~ 221 (223)
++-|++||++.
T Consensus 445 l~~l~~al~a~ 455 (456)
T 4atq_A 445 LEVLAAAIKAH 455 (456)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999999853
No 220
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=97.60 E-value=0.00021 Score=64.09 Aligned_cols=105 Identities=10% Similarity=-0.013 Sum_probs=59.0
Q ss_pred ccccCCEEEEecCCCCCCCc--C----cc----cCCC-cEEEecccccccCCcccceeEEE-ecChhHHHHHHH----HH
Q 027424 2 AHAHGALLLVDNSIMSPVLS--R----PL----ELGA-DIVMHSATKFIAGHSDVMAGVLA-VKGERLAKELYF----LQ 65 (223)
Q Consensus 2 a~~~g~~lvVDnT~~s~~~~--~----pl----~~GA-Divv~S~tK~l~G~~d~~~G~v~-~~~~~~~~~l~~----~~ 65 (223)
|+++++++|+|+.+..-..- . ++ +.+- =|++.|+||+++-.|..+|.+++ ..++++.+++.. ..
T Consensus 203 ~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~ 282 (405)
T 3k7y_A 203 VLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIV 282 (405)
T ss_dssp HHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred HHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHH
Confidence 67899999999998532211 0 11 1221 28889999999877888887654 345555444432 22
Q ss_pred HhcCCCCChHhHHHHHhcHHH------H---HHHH-HHHHhHHHHHHHHHh
Q 027424 66 NAEGSGLAPFDCWICLRGVKT------M---ALRV-EKQQDNAQKIAEFLA 106 (223)
Q Consensus 66 ~~~g~~~sp~da~ll~~~l~t------l---~~R~-~~~~~na~~la~~L~ 106 (223)
+..-...+.+....+...++. + ..++ ++..++...+.+.|+
T Consensus 283 ~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 283 RKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222233433333333322 1 1222 445667777888888
No 221
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=97.59 E-value=6.3e-05 Score=67.05 Aligned_cols=101 Identities=14% Similarity=0.133 Sum_probs=57.5
Q ss_pred CccccCCEEEEecCCCCCCCc------CcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-hcC--CC
Q 027424 1 MAHAHGALLLVDNSIMSPVLS------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEG--SG 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~------~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-~~g--~~ 71 (223)
+|+++|++||+|+++. .+.. .......|++ +++|.++| +-.+ |+++++ +++.+.+..... ..+ ..
T Consensus 229 l~~~~~~~li~DEv~~-g~~~g~~~~~~~~~~~~di~--t~sK~~~~-G~~i-G~~~~~-~~~~~~~~~~~~~~~~~t~~ 302 (429)
T 3k28_A 229 VTEQNGALLIFDEVMT-GFRVAYNCGQGYYGVTPDLT--CLGKVIGG-GLPV-GAYGGK-AEIMRQVAPSGPIYQAGTLS 302 (429)
T ss_dssp HHHHHTCEEEEECTTT-TTTSSTTHHHHHHTCCCSEE--EECGGGGT-TSCC-EEEEEC-HHHHTTBTTTSSBCCCCTTT
T ss_pred HHHHcCCEEEEecccc-ccccCcchHHHHhCCCCcee--hhhhhhcC-CCCe-EEEEEc-HHHHhhhccCCCccccCCCC
Confidence 4789999999999984 3211 1112234654 67899986 5555 556554 455544322111 122 23
Q ss_pred CChHhHHHHHhcHHHH-HHHHHHHHhHHHHHHHHHhc
Q 027424 72 LAPFDCWICLRGVKTM-ALRVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl-~~R~~~~~~na~~la~~L~~ 107 (223)
.+|..+...+..++.+ ....++..++...+.+.|++
T Consensus 303 ~~~~a~aaa~aal~~~~~~~~~~~~~~~~~l~~~L~~ 339 (429)
T 3k28_A 303 GNPLAMAAGYETLVQLTPESYVEFERKAEMLEAGLRK 339 (429)
T ss_dssp TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666666666666643 33345666666666666654
No 222
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=97.59 E-value=0.00021 Score=61.10 Aligned_cols=106 Identities=14% Similarity=0.023 Sum_probs=58.4
Q ss_pred CccccCCEEEEecCC---C--C-CCCcCccc--CCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHHhcCCCC
Q 027424 1 MAHAHGALLLVDNSI---M--S-PVLSRPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~---~--s-~~~~~pl~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 72 (223)
+|+++|+++|+|+++ + . +...+.+. .++|+++.|.+|. +|. .-.|++++++ ++.+.+.......+...
T Consensus 172 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~--~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 247 (359)
T 1svv_A 172 SCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGM--FGEALIILND-ALKPNARHLIKQRGALM 247 (359)
T ss_dssp HHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCS--SCEEEEECSG-GGCTTHHHHHHHTTCCC
T ss_pred HHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCC--CceEEEEEcc-cHHHHHHHHHhcCCccc
Confidence 478999999999997 2 1 22222211 4689999999997 332 2236776654 55444443322223211
Q ss_pred --ChHhHHHHHhcH--HHHHHHHHHHHhHHHHHHHHHhcCCCe
Q 027424 73 --APFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRV 111 (223)
Q Consensus 73 --sp~da~ll~~~l--~tl~~R~~~~~~na~~la~~L~~~p~v 111 (223)
++.....+...+ +.+....++..++...+.+.| +.+++
T Consensus 248 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~ 289 (359)
T 1svv_A 248 AKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL-EACGI 289 (359)
T ss_dssp TTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTC
T ss_pred ccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCe
Confidence 221111111112 123445577778888888888 45554
No 223
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=97.58 E-value=0.00014 Score=65.27 Aligned_cols=101 Identities=21% Similarity=0.190 Sum_probs=60.6
Q ss_pred CccccCCEEEEecCCCCCCCcC------cccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHH---HHHhcC--
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF---LQNAEG-- 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~------pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~---~~~~~g-- 69 (223)
+|+++|++||+|++++ ++... .+....|++ |++|.++| +.. .|+++++ +++.+.+.. .....+
T Consensus 230 l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~-~G~v~~~-~~~~~~l~~~~~~~~~~~~t 303 (453)
T 2cy8_A 230 LARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLT--CLAKASAG-GLP-GGILGGR-EDVMGVLSRGSDRKVLHQGT 303 (453)
T ss_dssp HHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEE--EEEGGGGT-TSS-CEEEEEC-HHHHTTSSSCC---------
T ss_pred HHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEE--EEChhhhC-Ccc-eEEEech-HHHHHHhccccCCCceeCCC
Confidence 4789999999999986 43211 122346866 88899997 544 4556555 455544332 100111
Q ss_pred CCCChHhHHHHHhcHHH-H-HHHHHHHHhHHHHHHHHHhc
Q 027424 70 SGLAPFDCWICLRGVKT-M-ALRVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~t-l-~~R~~~~~~na~~la~~L~~ 107 (223)
...+|..+......|+. + ....++..++...+.+.|++
T Consensus 304 ~~~n~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (453)
T 2cy8_A 304 FTGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNH 343 (453)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 23577777777777776 4 23345666666666666654
No 224
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=97.58 E-value=8.6e-05 Score=66.10 Aligned_cols=120 Identities=15% Similarity=0.136 Sum_probs=67.5
Q ss_pred CccccCCEEEEecCCCCC---CC--cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH-HhcC--CCC
Q 027424 1 MAHAHGALLLVDNSIMSP---VL--SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEG--SGL 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~---~~--~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~-~~~g--~~~ 72 (223)
+|+++|++||+|+++... .. +.......|++ +++|.++| +..+|+ ++++ +++.+.+.... ...+ ...
T Consensus 231 l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~~-G~~iG~-~~~~-~~i~~~~~~~~~~~~~~t~~~ 305 (434)
T 3l44_A 231 LVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLT--ALGKVIGG-GLPIGA-YGGK-KEIMEQVAPLGPAYQAGTMAG 305 (434)
T ss_dssp HHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEE--EEEGGGGT-TSSCEE-EEEC-HHHHTTBTTTSSBCCCCTTTT
T ss_pred HHHHcCCEEEEeccccceeccccHHHHHcCCCCCee--ehhhhhcC-CcCeee-EEEc-HHHHHhhccCCCcccCCCCCc
Confidence 478999999999998522 10 11122235654 67899985 566665 4454 45554432210 0122 234
Q ss_pred ChHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhc----CCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 73 APFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 73 sp~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
+|..+......++.+. ...++..++...+.+.|++ ++.+..+ ++.|.++.+++
T Consensus 306 ~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~~~~ 364 (434)
T 3l44_A 306 NPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITL------------------NRLKGALTVYF 364 (434)
T ss_dssp CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE------------------EEETTEEEEEE
T ss_pred CHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE------------------EeeccEEEEEE
Confidence 6666666666666542 3345666666666666654 4433222 23678888887
No 225
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=97.56 E-value=0.0002 Score=64.57 Aligned_cols=165 Identities=20% Similarity=0.239 Sum_probs=91.3
Q ss_pred CccccCCEEEEecCCCCCCC-------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHH--HH-HHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVL-------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY--FL-QNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~-------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~--~~-~~~~g~ 70 (223)
+|+++|+++|+|+++.. +. +.......|++ |++|.+ .+|+ +++++ ++.+.+. .. ....+.
T Consensus 260 l~~~~g~lli~DEv~~g-~g~~g~~~~~~~~~~~~di~--t~sK~l-----~iG~-~~~~~-~~~~~l~~~~~~~~~~~~ 329 (449)
T 2cjg_A 260 LCDEFDALLIFDEVQTG-CGLTGTAWAYQQLDVAPDIV--AFGKKT-----QVCG-VMAGR-RVDEVADNVFAVPSRLNS 329 (449)
T ss_dssp HHHHTTCEEEEECTTTT-TTTTSSSSTHHHHTCCCSEE--EECGGG-----SSEE-EEECG-GGGGSTTCTTTSTTSSCC
T ss_pred HHHHCCcEEEEeccccC-CCccCcceeecccCCCceEE--EecCcc-----cEEE-EEECH-HHhhhhhhcccCCccccc
Confidence 47899999999999752 21 11222356766 677998 3555 54554 5544311 00 011222
Q ss_pred --CCChHhHHHHHhcHHHHH--HHHHHHHhHHHHHHHHHhc----CCC-eeEEEcCCCCCCcchHHHHhhhCCCCeeEEE
Q 027424 71 --GLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPR-VKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 141 (223)
Q Consensus 71 --~~sp~da~ll~~~l~tl~--~R~~~~~~na~~la~~L~~----~p~-v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf 141 (223)
..+|..+......++.+. ...++..++...+.+.|++ +|. +..+ ++.|.++.|
T Consensus 330 t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~------------------~~~g~~~~~ 391 (449)
T 2cjg_A 330 TWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDP------------------RGRGLMCAF 391 (449)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE------------------EEETTEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE------------------eeccEEEEE
Confidence 235666666666776543 2235566667777777764 453 3222 235788999
Q ss_pred EeCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHH
Q 027424 142 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 217 (223)
Q Consensus 142 ~~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~A 217 (223)
++.+.....+|.+.+. ..++ +..|. .++.||||..+ |+.+.+++-|+++
T Consensus 392 ~~~~~~~~~~~~~~l~--~~Gv--------~v~~~-----------------g~~~iRi~~~~~~t~e~i~~~l~~l~~~ 444 (449)
T 2cjg_A 392 SLPTTADRDELIRQLW--QRAV--------IVLPA-----------------GADTVRFRPPLTVSTAEIDAAIAAVRSA 444 (449)
T ss_dssp ECSSHHHHHHHHHHHH--HTTE--------ECEEE-----------------TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EECChHHHHHHHHHHH--HCCe--------EEecC-----------------CCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 8865433445555442 1111 00111 14679997654 4566677777777
Q ss_pred Hhc
Q 027424 218 LRT 220 (223)
Q Consensus 218 l~~ 220 (223)
++.
T Consensus 445 l~~ 447 (449)
T 2cjg_A 445 LPV 447 (449)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 226
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=97.53 E-value=0.00033 Score=62.59 Aligned_cols=105 Identities=19% Similarity=0.172 Sum_probs=62.2
Q ss_pred CccccCCEEEEecCCCCC-----------CCcCcc-------cCCCcEEEecccccccCCcccceeEEEecChhHHHHHH
Q 027424 1 MAHAHGALLLVDNSIMSP-----------VLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 62 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~-----------~~~~pl-------~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~ 62 (223)
+|+++|+++|+|++++.+ +.-.++ ...+|+++.|.+|+.+ .+ .+|+++.+++++.+.+.
T Consensus 203 la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~-~~--~gG~~~~~~~~~~~~~~ 279 (456)
T 2ez2_A 203 LTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCL-VN--IGGFLCMNDDEMFSSAK 279 (456)
T ss_dssp HHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTC-CS--SCEEEEESCHHHHHHHH
T ss_pred HHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCC-CC--ceeEEEECCHHHHHHHH
Confidence 478999999999997541 222221 2347999989889865 33 47888776677777665
Q ss_pred HHHHh-cC----CCCChHhHHH-HHhcHHHH-HHHHHHHHhHHHHHHHHHhcC
Q 027424 63 FLQNA-EG----SGLAPFDCWI-CLRGVKTM-ALRVEKQQDNAQKIAEFLASH 108 (223)
Q Consensus 63 ~~~~~-~g----~~~sp~da~l-l~~~l~tl-~~R~~~~~~na~~la~~L~~~ 108 (223)
..... .| ...++..... ...-++.+ ...+++..+++..+.+.|++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (456)
T 2ez2_A 280 ELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAA 332 (456)
T ss_dssp HHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhccCcccccCcchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 54332 12 1123222111 22222333 345566677778888888763
No 227
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=97.52 E-value=0.00026 Score=64.47 Aligned_cols=162 Identities=15% Similarity=0.211 Sum_probs=86.5
Q ss_pred CccccCCEEEEecCCCCCCCcC----cc-cCC----CcEEEeccccc-ccCCcccceeEEEecChhHHHHHHHHHHhcCC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----PL-ELG----ADIVMHSATKF-IAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----pl-~~G----ADivv~S~tK~-l~G~~d~~~G~v~~~~~~~~~~l~~~~~~~g~ 70 (223)
+|+++|+++|+|++.. .+... .+ .+| .|++ |++|. ++ ||+++ ++++. .+... ...+.
T Consensus 287 l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~l~------GG~~~--~~~~~-~~~~~-~~~~T 353 (472)
T 1ohv_A 287 ISRKHGCAFLVDEVQT-GGGSTGKFWAHEHWGLDDPADVM--TFSKKMMT------GGFFH--KEEFR-PNAPY-RIFNT 353 (472)
T ss_dssp HHHHTTCEEEEECTTT-TTTTTSSSSGGGGGCCSSCCSEE--EECGGGSS------EEEEE--CGGGS-CSSSS-SSCCS
T ss_pred HHHHhCCEEEEeCccc-CCCCCCCchhccccCCCCCCCEE--EEcccccc------CCccC--chhhc-ccccc-cccCc
Confidence 4789999999999974 22211 11 235 6765 67798 55 36664 44442 11100 11121
Q ss_pred -CCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhc----CCC-eeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 71 -GLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPR-VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 71 -~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~----~p~-v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
..+|..+...+..|+.+.. ..++..+....+.+.|++ +|. |..| ++.|.++.|+
T Consensus 354 ~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~------------------~~~g~~~~~~ 415 (472)
T 1ohv_A 354 WLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRV------------------RGRGTFCSFD 415 (472)
T ss_dssp SSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEE------------------EEETTEEEEE
T ss_pred cCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEee------------------cCCceEEEEE
Confidence 2467666666666765432 234444555555555543 332 2221 2357889998
Q ss_pred eCCHHHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHH
Q 027424 143 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 218 (223)
Q Consensus 143 ~~~~~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~dl~~Al 218 (223)
+.+.....+|.+.+. ..++. ..|. ..+.||||.++ |+.+.+++.|++++
T Consensus 416 ~~~~~~~~~~~~~l~--~~Gv~--------~~~~-----------------g~~~iRi~~~~~~t~e~i~~~~~~l~~~l 468 (472)
T 1ohv_A 416 TPDESIRNKLISIAR--NKGVM--------LGGC-----------------GDKSIRFRPTLVFRDHHAHLFLNIFSDIL 468 (472)
T ss_dssp CSSHHHHHHHHHHHH--HTTEE--------CEEE-----------------TTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred eCChhHHHHHHHHHH--HCCeE--------EecC-----------------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 865444556665551 11110 0110 14679998774 45666677777776
Q ss_pred hc
Q 027424 219 RT 220 (223)
Q Consensus 219 ~~ 220 (223)
+.
T Consensus 469 ~~ 470 (472)
T 1ohv_A 469 AD 470 (472)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 228
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.52 E-value=0.00079 Score=61.83 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=71.0
Q ss_pred CccccCCEEEEecCCCCC------CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-----hcC
Q 027424 1 MAHAHGALLLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-----AEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~------~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-----~~g 69 (223)
+|+++|+++|+|+..... +.+.-...-.||++ +.|.++|..--+++ ++.+ +++.+.+..... ..|
T Consensus 265 lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t--~~K~l~gG~~Pl~a-v~~~-~~i~~~~~~~~~~~~~~~hg 340 (473)
T 4e3q_A 265 ILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII--SSKNLTAGFFPMGA-VILG-PELSKRLETAIEAIEEFPHG 340 (473)
T ss_dssp HHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE--ECGGGGTTSSCCEE-EEEC-HHHHHHHHHHHHHHSCCCCC
T ss_pred HhcccceEEeccCccccCCcccchhHHHhcCCCCChHH--hcccccCCCCCccc-cccc-HHHHHHhccccccccccccC
Confidence 489999999999996321 11222222369887 46999864445555 4454 466665543211 123
Q ss_pred CCC--ChHhHHHHHhcHHHHHHH--HHHHHhHHHHHHHH---HhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEE
Q 027424 70 SGL--APFDCWICLRGVKTMALR--VEKQQDNAQKIAEF---LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 142 (223)
Q Consensus 70 ~~~--sp~da~ll~~~l~tl~~R--~~~~~~na~~la~~---L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~ 142 (223)
.+. +|..|...+..|+.+... +++..+....+.+. |.++|.|..|+ |.|-|+.|+
T Consensus 341 ~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vR------------------G~Gl~~gie 402 (473)
T 4e3q_A 341 FTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYR------------------GIGFMWALE 402 (473)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEEE------------------EETTEEEEE
T ss_pred CCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEe------------------ecceEEEEE
Confidence 332 577777777777776421 23333333344333 34577776665 568899998
Q ss_pred e
Q 027424 143 T 143 (223)
Q Consensus 143 ~ 143 (223)
+
T Consensus 403 l 403 (473)
T 4e3q_A 403 A 403 (473)
T ss_dssp E
T ss_pred E
Confidence 7
No 229
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=97.33 E-value=0.0064 Score=53.72 Aligned_cols=125 Identities=13% Similarity=0.047 Sum_probs=71.7
Q ss_pred CccccCCEEEEecCCCCCCCcCcccC-CCcEEEecccccccCCcccceeEEEecChhHHHHHHH-----------H-HH-
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-----------L-QN- 66 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~pl~~-GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~-----------~-~~- 66 (223)
|++. |++++||.+-+.+. .|++. ..|+++-|.+|.++ +. - .|++..+++ +.+++.. . ..
T Consensus 160 i~~~-~~~~~vD~~q~~g~--~~id~~~~d~~~~s~~K~~g-p~-G-~g~l~~~~~-~~~~~~~~~~p~~~~~~~~~~~~ 232 (361)
T 3m5u_A 160 YPKT-KTPLIVDASSDFFS--RKVDFSNIALFYGGVQKNAG-IS-G-LSCIFIRKD-MLERSKNKQIPSMLNYLTHAENQ 232 (361)
T ss_dssp CCCC-SSCEEEECGGGTTS--SCCCCTTEEEEEEETTTTSS-CT-T-CEEEEEEHH-HHHHHHTCCCCGGGCHHHHHHTT
T ss_pred cccc-CCEEEEEcccccCC--CCCCcccCCEEEEechhccC-CC-c-cEEEEEcHH-HHhhhcCCCCCceeehHHHhhcC
Confidence 3454 99999999854332 33332 47999999999995 42 2 355656653 3333321 1 00
Q ss_pred hcCCCCChHhHHHHHhcHHHH------HHHHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEE
Q 027424 67 AEGSGLAPFDCWICLRGVKTM------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 140 (223)
Q Consensus 67 ~~g~~~sp~da~ll~~~l~tl------~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~s 140 (223)
..-.+.+-...+-+..+++.+ ..+.++..+.+..+.+.|++.+.+..+..+ +.+ ...++++
T Consensus 233 ~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~-----~~~--------rs~~ivs 299 (361)
T 3m5u_A 233 SLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHAD-----KKD--------RSLMNVS 299 (361)
T ss_dssp TCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSC-----GGG--------BCSSEEE
T ss_pred CCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCC-----HHH--------cCCeEEE
Confidence 011233334455566666654 334466667777788888888865333221 111 1357999
Q ss_pred EEeCC
Q 027424 141 FLTGS 145 (223)
Q Consensus 141 f~~~~ 145 (223)
|.+.+
T Consensus 300 f~~~~ 304 (361)
T 3m5u_A 300 FNIAK 304 (361)
T ss_dssp EEESS
T ss_pred EECCC
Confidence 99854
No 230
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=96.24 E-value=6e-05 Score=69.14 Aligned_cols=123 Identities=17% Similarity=0.147 Sum_probs=65.6
Q ss_pred CccccCCEEEEecCCCCCCCcCc---cc-CC--CcEEEecccccccCCcccceeEEEecChhHHHHHHH-----HHHhcC
Q 027424 1 MAHAHGALLLVDNSIMSPVLSRP---LE-LG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-----LQNAEG 69 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~p---l~-~G--ADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~-----~~~~~g 69 (223)
+|+++|+++|+|+++. +-..+ .+ +| .|++ +++|.++| +..+| +++++ +++.+.+.. ......
T Consensus 262 l~~~~g~llI~DEv~~--~r~g~~~a~~~~gv~pDi~--t~sK~lg~-G~piG-~v~~~-~~i~~~l~~~~~g~~~~~~T 334 (465)
T 2yky_A 262 EASRCGALLIFDEVMT--SRLSGGGAQEMLGISADLT--TLGKYIGG-GMSFG-AFGGR-RDLMERFDPARDGAFAHAGT 334 (465)
Confidence 5899999999999986 21111 11 13 4654 78999998 65554 45454 455555443 011111
Q ss_pred CCCChHhHHHHHhcHHHHHH--HHHHHHhHHHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeC
Q 027424 70 SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 144 (223)
Q Consensus 70 ~~~sp~da~ll~~~l~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~ 144 (223)
...+|..+...+..|+.+.. ..++..++...+.+.|++.. .+ || + ....++.|.++.|++.
T Consensus 335 ~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~--~~--~~-~---------~~~v~g~G~~~~i~~~ 397 (465)
T 2yky_A 335 FNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIA--VE--NQ-A---------PLQFTGLGSLGTIHFS 397 (465)
Confidence 12456555555566665432 23444444444544444321 11 11 0 0113467889999884
No 231
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=97.05 E-value=0.01 Score=53.40 Aligned_cols=53 Identities=11% Similarity=0.045 Sum_probs=35.9
Q ss_pred CccccCCEEEEecCCCCCCCcC----c--c----cCCC-cEEEecccccccCCcccceeEEEec
Q 027424 1 MAHAHGALLLVDNSIMSPVLSR----P--L----ELGA-DIVMHSATKFIAGHSDVMAGVLAVK 53 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~~~----p--l----~~GA-Divv~S~tK~l~G~~d~~~G~v~~~ 53 (223)
+|+++++++++|+.+..-..-. + + +.+- =++++|++|.++-.+..+|.+++..
T Consensus 218 ~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~ 281 (420)
T 4h51_A 218 LMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLL 281 (420)
T ss_dssp HHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEEC
T ss_pred HHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecc
Confidence 3678999999999984321110 1 1 1111 2889999999998888988766543
No 232
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=96.89 E-value=0.01 Score=55.12 Aligned_cols=58 Identities=10% Similarity=0.089 Sum_probs=39.3
Q ss_pred cccCCEEEEecCCCCCCC--cCccc--CCCcEEEecccccccCCcccceeEEEecChhHHHHH
Q 027424 3 HAHGALLLVDNSIMSPVL--SRPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 61 (223)
Q Consensus 3 ~~~g~~lvVDnT~~s~~~--~~pl~--~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l 61 (223)
+++|++||+|++++.... ...+. .+.+|++.|+||+++..|..+|. ++++++++.+++
T Consensus 277 ~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~-~~~~~~~l~~~l 338 (546)
T 2zy4_A 277 HRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGV-VAAHQQNVFDLA 338 (546)
T ss_dssp TCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGCEEE-EEEESSCHHHHH
T ss_pred ccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcceEE-EEECCHHHHHHH
Confidence 789999999999864321 12222 25679999999999877777655 555554354444
No 233
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=96.50 E-value=0.0012 Score=64.66 Aligned_cols=171 Identities=13% Similarity=0.161 Sum_probs=93.4
Q ss_pred CccccCCEEEEecCCCC----C--CCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH----hcCC
Q 027424 1 MAHAHGALLLVDNSIMS----P--VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN----AEGS 70 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~--~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~----~~g~ 70 (223)
+|+++|+++|+|+.+.. + +.+.-...-.||++ +.|-++|.---+| +++++ +++.+.+..... ..|.
T Consensus 624 lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiit--lsK~L~gG~~Plg-av~~~-~~i~~~~~~~~~~~~~~hg~ 699 (831)
T 4a0g_A 624 ECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIAC--FAKLLTGGMVPLA-VTLAT-DAVFDSFSGDSKLKALLHGH 699 (831)
T ss_dssp HHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEE--ECGGGGTTSSCCE-EEEEC-HHHHHTTCSSCGGGSCCCCC
T ss_pred HHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEE--EecccccCccCcE-EEEEC-HHHHHHHhcccccccceeec
Confidence 47899999999997532 1 11111112358875 8899987213444 45454 455544321100 1222
Q ss_pred --CCChHhHHHHHhcHHHHHHH--HHHHHhHH--------HHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCee
Q 027424 71 --GLAPFDCWICLRGVKTMALR--VEKQQDNA--------QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 138 (223)
Q Consensus 71 --~~sp~da~ll~~~l~tl~~R--~~~~~~na--------~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl 138 (223)
..+|..|...+..|+.+... .++..++. ..+.+.++++|.|..|. |.|.|
T Consensus 700 T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vr------------------g~Gl~ 761 (831)
T 4a0g_A 700 SYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVV------------------VIGTL 761 (831)
T ss_dssp TTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEE------------------EETTE
T ss_pred CCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEe------------------ecccE
Confidence 24677777777777766311 11111111 23455677788877665 36888
Q ss_pred EEEEeCCH--------HHHHHHHhhcCcceeccccCCCCCCCCCCccccCCCCCHHHHHhcCCCCCeEEEE----ecCCC
Q 027424 139 LSFLTGSL--------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIED 206 (223)
Q Consensus 139 ~sf~~~~~--------~~~~~f~~~l~l~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~gi~~~liRls----vGlEd 206 (223)
+.|++.+. +.+.++.+.+. ..|+ +..| ..+.|||+ +--|+
T Consensus 762 ~~iel~~~~~~~~~~~~~a~~~~~~l~--e~Gv--------~v~p------------------~g~~lrl~pp~~~t~e~ 813 (831)
T 4a0g_A 762 FALELKADASNSGYASLYAKSLLIMLR--EDGI--------FTRP------------------LGNVIYLMCGPCTSPEI 813 (831)
T ss_dssp EEEEEC---------CHHHHHHHHHHH--HTTE--------ECCC------------------BTTEEEEECCTTCCHHH
T ss_pred EEEEEecCccccccchHHHHHHHHHHH--HCCc--------EEEe------------------cCCEEEEECCCCCCHHH
Confidence 99998422 12333333321 1111 1111 12578887 55667
Q ss_pred HHHHHHHHHHHHhcC
Q 027424 207 VNDLISDLDKALRTG 221 (223)
Q Consensus 207 ~~dL~~dl~~Al~~~ 221 (223)
.+.+++-|+++|+..
T Consensus 814 id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 814 CRRLLTKLYKRLGEF 828 (831)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHh
Confidence 888899999988765
No 234
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=96.46 E-value=0.0014 Score=58.14 Aligned_cols=101 Identities=14% Similarity=0.169 Sum_probs=58.1
Q ss_pred CccccCCEEEEecCCCCCCC------cCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHHH-hcCCC--
Q 027424 1 MAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGSG-- 71 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s~~~------~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~~-~~g~~-- 71 (223)
+|+++|++||+|++++ .+. +.......|++ |++|.+++ +..+ |+++. ++++.+.+..... ..+.+
T Consensus 228 l~~~~~~~li~DEv~~-g~~~g~~~~~~~~~~~~di~--t~sK~~~~-G~~~-G~~~~-~~~~~~~~~~~~~~~~~~t~~ 301 (427)
T 3fq8_A 228 ITLEHDALLVFDEVIT-GFRIAYGGVQEKFGVTPDLT--TLGKIIGG-GLPV-GAYGG-KREIMQLVAPAGPMYQAGTLS 301 (427)
T ss_dssp HHHHTTCEEEEECTTT-BTTTBTTHHHHHTTCCCSEE--EECGGGGT-TSSC-EEEEE-CHHHHTTBTTTSSBCCCCTTT
T ss_pred HHHHcCCEEEEecccc-ccccCcchhhHhcCCCCChh--hhhhhhhC-Ccce-EEEEE-cHHHHHhhccCCCccccCCCC
Confidence 4789999999999986 321 11122234654 67799995 5444 55555 4555554432110 12222
Q ss_pred CChHhHHHHHhcHHHH--HHHHHHHHhHHHHHHHHHhc
Q 027424 72 LAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLAS 107 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl--~~R~~~~~~na~~la~~L~~ 107 (223)
.+|..+......++.+ ....++..++...+.+.|++
T Consensus 302 ~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~ 339 (427)
T 3fq8_A 302 GNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLA 339 (427)
T ss_dssp TCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 3677666666777654 23345566666666666654
No 235
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=96.29 E-value=0.13 Score=45.74 Aligned_cols=99 Identities=12% Similarity=0.012 Sum_probs=51.0
Q ss_pred cCCEEEEecCCCCCC-CcCcccCCCcEEEecccccccCCcccceeEEEecChhH------------HHHHHHHHHhcCCC
Q 027424 5 HGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL------------AKELYFLQNAEGSG 71 (223)
Q Consensus 5 ~g~~lvVDnT~~s~~-~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~------------~~~l~~~~~~~g~~ 71 (223)
+|++++||.+-+-+. ..+.-++ |+++-|.+|+++ +. - .|++.++++.+ +..........| +
T Consensus 191 ~g~~~~vDa~qs~g~~pidv~~~--~~~~~s~hK~lG-P~-G-~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~g-T 264 (386)
T 3qm2_A 191 PEVVVTADFSSTILSAPLDVSRY--GVIYAGAQKNIG-PA-G-LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFN-T 264 (386)
T ss_dssp TTCCEEEECTTTTTSSCCCGGGC--SEEEEETTTTTC-CT-T-EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------
T ss_pred CCCEEEEEcccccCCCCCCcccc--CEEEEecccccC-CC-c-cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCC-C
Confidence 589999999864432 2232234 467899999995 43 2 35565665421 010000011122 2
Q ss_pred CChHhHHHHHhcHHHHH------HHHHHHHhHHHHHHHHHhcCC
Q 027424 72 LAPFDCWICLRGVKTMA------LRVEKQQDNAQKIAEFLASHP 109 (223)
Q Consensus 72 ~sp~da~ll~~~l~tl~------~R~~~~~~na~~la~~L~~~p 109 (223)
.+....+.+..+++.+. .+.++..+.+..+.+.|++.+
T Consensus 265 p~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~ 308 (386)
T 3qm2_A 265 PPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD 308 (386)
T ss_dssp -CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 22233555666666543 333555566666667777653
No 236
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=95.33 E-value=0.011 Score=53.91 Aligned_cols=120 Identities=17% Similarity=0.197 Sum_probs=67.8
Q ss_pred CccccCCEEEEecCCCC----CCCcCcccCCCcEEEecccccccCCcccceeEEEecChhHHHHHHHHH--HhcCCCC--
Q 027424 1 MAHAHGALLLVDNSIMS----PVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGSGL-- 72 (223)
Q Consensus 1 ia~~~g~~lvVDnT~~s----~~~~~pl~~GADivv~S~tK~l~G~~d~~~G~v~~~~~~~~~~l~~~~--~~~g~~~-- 72 (223)
+|+++|++||+|+.... .+.+.-...-.||++ +.|.++|. .-+ |++.++ +++.+.+.... ...+.+.
T Consensus 249 lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~t--~gK~lggG-~Pi-ga~~~~-~ei~~~~~~~~~~~~h~~T~~g 323 (454)
T 4ao9_A 249 SATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLTT--LGKYIGGG-MSF-GAFGGR-ADVMALFDPRTGPLAHSGTFNN 323 (454)
T ss_dssp HHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEEE--EEGGGGTT-SSC-EEEEEC-HHHHGGGCTTTCSCCCCCTTTT
T ss_pred HHhhcCCEEEEECCCcCCCccccchhccCCCCcEEE--eccccCCC-Ccc-eeeeeH-HHHHHHHhhccCCccccCCCCC
Confidence 48999999999998632 111211112258875 67999863 344 555454 45544332100 0123232
Q ss_pred ChHhHHHHHhcHHHH--HHHHHHHHhHHHHHHHHHh----cCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe
Q 027424 73 APFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 143 (223)
Q Consensus 73 sp~da~ll~~~l~tl--~~R~~~~~~na~~la~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~ 143 (223)
+|..+...+..|+.+ ....++..++...+.+.|+ ++|.+..|+ |.|.|+.+++
T Consensus 324 nPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vr------------------g~G~m~gi~f 382 (454)
T 4ao9_A 324 NVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFT------------------GIGSLMNAHF 382 (454)
T ss_dssp CHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEE------------------EETTEEEEES
T ss_pred CHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEe------------------eeceEEEEEE
Confidence 577666666666665 2334555556666655554 355544444 5788999887
No 237
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=36.16 E-value=90 Score=22.46 Aligned_cols=21 Identities=5% Similarity=0.107 Sum_probs=16.6
Q ss_pred eEEEEeCCHHHHHHHHh-hcCc
Q 027424 138 VLSFLTGSLALSKHVVE-TTKY 158 (223)
Q Consensus 138 l~sf~~~~~~~~~~f~~-~l~l 158 (223)
.+++.+.+.+++.+|+. .|.+
T Consensus 29 ~v~I~V~Dle~A~~FY~dvLGf 50 (155)
T 4g6x_A 29 LTNVFVDDQAKAESFYTGKLGF 50 (155)
T ss_dssp EEEEEESCHHHHHHHHHHTTCC
T ss_pred EEEEEeCCHHHHHHHHHHHhCC
Confidence 56777889999999994 5665
No 238
>2ckc_A Chromodomain-helicase-DNA-binding protein 7; protein-protein interaction, phosphorylation, disease mutation, nucleotide-binding; NMR {Homo sapiens} SCOP: d.76.2.1 PDB: 2v0e_A
Probab=35.86 E-value=23 Score=24.11 Aligned_cols=21 Identities=24% Similarity=0.482 Sum_probs=17.2
Q ss_pred HHHHHHHhcCCCeeEEEcCCCC
Q 027424 99 QKIAEFLASHPRVKKVNYAGLP 120 (223)
Q Consensus 99 ~~la~~L~~~p~v~~V~yP~l~ 120 (223)
..|.+||+.||.- .|.+|++.
T Consensus 47 KdL~dWLrqhP~y-~vD~p~f~ 67 (80)
T 2ckc_A 47 KDLVEWLKLHPTY-TVDMPSYV 67 (80)
T ss_dssp HHHHHHHHHCTTE-EESCCCCC
T ss_pred cCHHHHHHHCCCc-EEecCCcc
Confidence 5688999999985 78888764
No 239
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A {Sulfolobus tokodaii}
Probab=26.17 E-value=1.3e+02 Score=19.16 Aligned_cols=46 Identities=22% Similarity=0.147 Sum_probs=33.7
Q ss_pred HHHHHHHHhcCCCeeEEEcCCCCCCcchHHHHhhhCCCCeeEEEEeCCHHHHHHHHh-hcC
Q 027424 98 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE-TTK 157 (223)
Q Consensus 98 a~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~~~~~~~~~f~~-~l~ 157 (223)
...+++.|++.|.|..++.-. ..+.-++-+...+.+...+|++ .+.
T Consensus 15 ~~~~~~~l~~~peV~~~~~vt--------------G~~d~l~~v~~~d~~~l~~~~~~~l~ 61 (83)
T 2zbc_A 15 EDEVFERLKSMSEVTEVHVVY--------------GVYDIVVKVEADSMDKLKDFVTNTIR 61 (83)
T ss_dssp HHHHHHHHTTCTTEEEEEECS--------------SSCSEEEEEECSSHHHHHHHHHHTGG
T ss_pred HHHHHHHHhCCCCeEEEEEEe--------------ccCCEEEEEEECCHHHHHHHHHHHhc
Confidence 367899999999999988641 1245566666688888999985 443
No 240
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=26.03 E-value=67 Score=25.82 Aligned_cols=55 Identities=18% Similarity=0.277 Sum_probs=34.5
Q ss_pred HHHHHHHHHhcCCCe------eEEEcCCCCCCcchHHHHhhhCCCCeeEEEEe-CCHHHH-HHHHhh
Q 027424 97 NAQKIAEFLASHPRV------KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALS-KHVVET 155 (223)
Q Consensus 97 na~~la~~L~~~p~v------~~V~yP~l~~~~~~~~~~~~~~g~ggl~sf~~-~~~~~~-~~f~~~ 155 (223)
-|.+|++||++||.| .+++|- .|.++-..+.+...|.-+++-. .+-+.+ +.|+++
T Consensus 114 CA~~v~~FL~~~~~v~L~If~aRLY~~----~~~~~~gLr~L~~aG~~v~iM~~~ef~~CW~~FV~n 176 (203)
T 3v4k_A 114 CAQEMAKFISKNKHVSLCIKTARIYDD----QGRCQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDH 176 (203)
T ss_pred HHHHHHHHHhhCCCeEEEEEEEeeccc----CchHHHHHHHHHHCCCeEEecCHHHHHHHHHHHccC
Confidence 689999999999985 455543 3566666666655676666633 222322 456655
No 241
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=23.18 E-value=10 Score=31.78 Aligned_cols=13 Identities=8% Similarity=0.100 Sum_probs=10.6
Q ss_pred cccCCEEEEecCCC
Q 027424 3 HAHGALLLVDNSIM 16 (223)
Q Consensus 3 ~~~g~~lvVDnT~~ 16 (223)
++.| +|+||.|++
T Consensus 174 k~~~-pVivD~sH~ 186 (267)
T 2nwr_A 174 KQWA-KVIYDATHS 186 (267)
T ss_dssp TTTS-EEEEETTGG
T ss_pred HHcC-CEEEcCCcc
Confidence 3457 999999987
No 242
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=20.94 E-value=14 Score=31.47 Aligned_cols=35 Identities=11% Similarity=0.192 Sum_probs=23.2
Q ss_pred CCEEEEecCCCC-----------C-------CCcCcccCCCc---EEEe-ccccccc
Q 027424 6 GALLLVDNSIMS-----------P-------VLSRPLELGAD---IVMH-SATKFIA 40 (223)
Q Consensus 6 g~~lvVDnT~~s-----------~-------~~~~pl~~GAD---ivv~-S~tK~l~ 40 (223)
|+||++|.|++. + ...-+..+||| |-+| -..|.++
T Consensus 195 ~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~ 251 (285)
T 3sz8_A 195 GCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARC 251 (285)
T ss_dssp SCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSC
T ss_pred CCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCC
Confidence 799999999972 2 12335667999 3345 5567765
Done!