BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027429
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6MT07|DNAJ_MYCMS Chaperone protein DnaJ OS=Mycoplasma mycoides subsp. mycoides SC
(strain PG1) GN=dnaJ PE=3 SV=1
Length = 372
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 12/87 (13%)
Query: 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDI-AGQKGHEHTLLLNEAYKVLMRGDL 105
KKK+YYE+LGVS A+ QEI++AYRKL K+YHPD+ H+ + +NEA VL+ D
Sbjct: 2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDK 61
Query: 106 RKDYDASIGQMRFHFGTNA---SAGFS 129
RK YD FG NA S+GFS
Sbjct: 62 RKQYD--------QFGHNAFDGSSGFS 80
>sp|P71500|DNAJ_MYCCT Chaperone protein DnaJ OS=Mycoplasma capricolum subsp. capricolum
(strain California kid / ATCC 27343 / NCTC 10154)
GN=dnaJ PE=3 SV=2
Length = 372
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDI-AGQKGHEHTLLLNEAYKVLMRGDL 105
KKK+YYE+LGVS A+ QEI++AYRKL K+YHPD+ H+ + +NEA VL+ D
Sbjct: 2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDK 61
Query: 106 RKDYDASIGQMRFHFGTNASAGFS 129
RK YD G F + S+ F+
Sbjct: 62 RKQYD-QFGHRAFDNSSGFSSNFT 84
>sp|B9DNJ9|DNAJ_STACT Chaperone protein DnaJ OS=Staphylococcus carnosus (strain TM300)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LGVS +A+ EIK+AYRKL KKYHPDI ++G E ++EAY+VL + R
Sbjct: 3 KRDYYEVLGVSKDASKDEIKKAYRKLSKKYHPDINQEEGAEEKFKEISEAYEVLSDENKR 62
Query: 107 KDYD 110
+YD
Sbjct: 63 ANYD 66
>sp|B8CXL0|DNAJ_HALOH Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1
Length = 375
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDI--AGQKGHEHTLLLNEAYKVLMRGDLR 106
K+YYE+LGVS +A+ +EIK+AYR+L +KYHPDI E ++EAY++L D R
Sbjct: 5 KDYYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDPDKR 64
Query: 107 KDYD----ASIGQMRFHFGTNASAGF 128
YD A I + F+F A GF
Sbjct: 65 ARYDQYGHAGINEEDFNFEDFAQRGF 90
>sp|Q8G6C6|DNAJ_BIFLO Chaperone protein DnaJ OS=Bifidobacterium longum (strain NCC 2705)
GN=dnaJ PE=3 SV=1
Length = 381
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 50 NYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDY 109
+YYE LGV A+ EIK+AYRKL +KYHPDIAG + + +N AY VL D R+ Y
Sbjct: 3 DYYETLGVERGASDDEIKKAYRKLSRKYHPDIAGPEFEDKFKEVNNAYDVLSNPDKRRMY 62
Query: 110 DASI 113
D+ +
Sbjct: 63 DSGV 66
>sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mitochondrial OS=Homo sapiens
GN=DNAJA3 PE=1 SV=2
Length = 480
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDI--AGQKGHEHTLLLNEAYKVLMRGDL 105
K++YY++LGV A+ +EIK+AY +L KKYHPD K E L EAY+VL
Sbjct: 91 KEDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVK 150
Query: 106 RKDYDASIGQMRFHFGTNASAGFSRSSWKGPPR--PEALF 143
RK YDA G F G ++G S WKG P PE LF
Sbjct: 151 RKQYDA-YGSAGFDPG---ASGSQHSYWKGGPTVDPEELF 186
>sp|Q2YT48|DNAJ_STAAB Chaperone protein DnaJ OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=dnaJ PE=3 SV=1
Length = 379
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|P63972|DNAJ_STAAW Chaperone protein DnaJ OS=Staphylococcus aureus (strain MW2)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|A8Z4B8|DNAJ_STAAT Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|Q6G8Y8|DNAJ_STAAS Chaperone protein DnaJ OS=Staphylococcus aureus (strain MSSA476)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|P63971|DNAJ_STAAN Chaperone protein DnaJ OS=Staphylococcus aureus (strain N315)
GN=dnaJ PE=1 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|P63970|DNAJ_STAAM Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=dnaJ PE=1 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|A6QHC2|DNAJ_STAAE Chaperone protein DnaJ OS=Staphylococcus aureus (strain Newman)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|Q5HFI1|DNAJ_STAAC Chaperone protein DnaJ OS=Staphylococcus aureus (strain COL)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|A5ITA7|DNAJ_STAA9 Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH9)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|Q2FXZ3|DNAJ_STAA8 Chaperone protein DnaJ OS=Staphylococcus aureus (strain NCTC 8325)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|Q2FGE4|DNAJ_STAA3 Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|A6U251|DNAJ_STAA2 Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH1)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|A7X2Y0|DNAJ_STAA1 Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|Q6GGC1|DNAJ_STAAR Chaperone protein DnaJ OS=Staphylococcus aureus (strain MRSA252)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 ASYD 66
>sp|Q75VW3|DNAJ_HYDTT Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM
6534 / IAM 12695 / TK-6) GN=dnaJ PE=3 SV=1
Length = 356
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 15/125 (12%)
Query: 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDI-AGQKGHEHTLLLNEAYKVLMRGDLRK 107
K+YY++LGVS +A +EIK+AYR+L K+YHPDI A + E +NEAY +L + RK
Sbjct: 4 KDYYQILGVSKDATAEEIKKAYRRLAKEYHPDISADENASEKFKEINEAYHILSDEERRK 63
Query: 108 DYD---ASIGQMRFHFGTNASAGFSRSSWKG---PPRPEA--------LFVDENACIGCR 153
+YD S + + F S W+G P+P+ E A GC
Sbjct: 64 EYDRILKSGDEKSYRDFMEYIQDFLESIWQGMRRSPKPKKGGDVRLKLELTLEEAAFGCE 123
Query: 154 ECVHH 158
+ + +
Sbjct: 124 KDIEY 128
>sp|Q99M87|DNJA3_MOUSE DnaJ homolog subfamily A member 3, mitochondrial OS=Mus musculus
GN=Dnaja3 PE=1 SV=1
Length = 480
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDI--AGQKGHEHTLLLNEAYKVLMRGDL 105
K +YY++LGV A+ ++IK+AY +L KKYHPD K E L EAY+VL
Sbjct: 91 KDDYYQILGVPRNASQKDIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVK 150
Query: 106 RKDYDASIGQMRFHFGTNASAGFSRSSWKGPPR--PEALF 143
RK YDA G F GT++S + W+G P PE LF
Sbjct: 151 RKQYDA-YGSAGFDPGTSSSG---QGYWRGGPSVDPEELF 186
>sp|Q3YT99|DNAJ_EHRCJ Chaperone protein DnaJ OS=Ehrlichia canis (strain Jake) GN=dnaJ
PE=3 SV=1
Length = 382
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDI--AGQKGHEHTLLLNEAYKVLMRGDL 105
K +YYELLGVS A +EIK+AYRK+ KYHPD ++ E L+EAY VL+ D
Sbjct: 3 KSDYYELLGVSKNATSEEIKKAYRKMALKYHPDTNPGNKEAEEKFKELSEAYDVLIDQDK 62
Query: 106 RKDY--------DASIGQMRFHFGTNASAGFS 129
R Y D + G+ F F + S FS
Sbjct: 63 RAAYDKYGHNAFDGAAGRGGFDFNSGFSGDFS 94
>sp|Q6F150|DNAJ_MESFL Chaperone protein DnaJ OS=Mesoplasma florum (strain ATCC 33453 /
NBRC 100688 / NCTC 11704 / L1) GN=dnaJ PE=3 SV=1
Length = 374
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LGVS + QEIK AYRKL KKYHPD+ + G E +NEA VL+ D +
Sbjct: 3 KRDYYEVLGVSKTSTEQEIKSAYRKLAKKYHPDMNKESGAEEKFKEVNEAASVLLDADKK 62
Query: 107 KDYD 110
YD
Sbjct: 63 AKYD 66
>sp|Q8CP18|DNAJ_STAES Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=dnaJ PE=3 SV=1
Length = 373
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LGV+ A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKR 62
Query: 107 KDYD 110
+YD
Sbjct: 63 ANYD 66
>sp|Q49Y21|DNAJ_STAS1 Chaperone protein DnaJ OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ
PE=3 SV=1
Length = 378
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LGVS A+ EIK+AYRKL K+YHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKQYHPDINKEEGADEKFKEISEAYEVLSDENKR 62
Query: 107 KDYD 110
+YD
Sbjct: 63 ANYD 66
>sp|Q182E7|DNAJ_CLOD6 Chaperone protein DnaJ OS=Clostridium difficile (strain 630)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 46 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPD--IAGQKGHEHTLLLNEAYKVLMRG 103
S K++YYE+LG+S A QEIK+AYRKL KYHPD ++ E +NEAY+VL
Sbjct: 2 STKRDYYEVLGISKGAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDD 61
Query: 104 DLRKDYD 110
RK YD
Sbjct: 62 TKRKTYD 68
>sp|B3EE31|DNAJ_CHLL2 Chaperone protein DnaJ OS=Chlorobium limicola (strain DSM 245 /
NBRC 103803) GN=dnaJ PE=3 SV=1
Length = 401
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPD--IAGQKGHEHTLLLNEAYKVLMRGDL 105
KK+YYE+LGVS A+ EIK+AYRKL +YHPD + EH +NEAY+VL D
Sbjct: 2 KKDYYEVLGVSRSASKDEIKKAYRKLALQYHPDKNPDNKDAEEHFKEVNEAYEVLSNDDK 61
Query: 106 RKDYD 110
R+ YD
Sbjct: 62 RRRYD 66
>sp|O66921|DNAJ2_AQUAE Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) GN=dnaJ2
PE=3 SV=1
Length = 376
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 45 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRG 103
+S KK+YYE+LGV A+ +EIK+AYR+L +KYHPDI + E +NEAY+VL
Sbjct: 3 SSTKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVLSDP 62
Query: 104 DLRKDYD 110
+ RK YD
Sbjct: 63 EKRKLYD 69
>sp|Q5HNW7|DNAJ_STAEQ Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=dnaJ PE=3 SV=1
Length = 373
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LGV+ A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKR 62
Query: 107 KDYD 110
+YD
Sbjct: 63 VNYD 66
>sp|Q8YUA5|DNAJ_NOSS1 Chaperone protein DnaJ OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=dnaJ PE=3 SV=1
Length = 376
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLRK 107
++YYE+LGV+ +A+ +EIK+AYR+L +KYHPD+ + G E +N AY+VL + R
Sbjct: 3 RDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRA 62
Query: 108 DYD 110
YD
Sbjct: 63 RYD 65
>sp|Q3MG81|DNAJ_ANAVT Chaperone protein DnaJ OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=dnaJ PE=3 SV=1
Length = 376
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLRK 107
++YYE+LGV+ +A+ +EIK+AYR+L +KYHPD+ + G E +N AY+VL + R
Sbjct: 3 RDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRA 62
Query: 108 DYD 110
YD
Sbjct: 63 RYD 65
>sp|Q2JW78|DNAJ_SYNJA Chaperone protein DnaJ OS=Synechococcus sp. (strain JA-3-3Ab)
GN=dnaJ PE=3 SV=1
Length = 394
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLRK 107
++YYE+LGVS +++ +EIK AYR+L +KYHPD+ + G E +N AY+VL +LR
Sbjct: 3 RDYYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDDELRA 62
Query: 108 DYD 110
YD
Sbjct: 63 RYD 65
>sp|Q3B2T5|DNAJ_PELLD Chaperone protein DnaJ OS=Pelodictyon luteolum (strain DSM 273)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPD--IAGQKGHEHTLLLNEAYKVLMRGDL 105
K++YYE+LGVS A+ EIK+AYRKL KYHPD + +H +NEAY+VL D
Sbjct: 2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDK 61
Query: 106 RKDYD 110
R+ YD
Sbjct: 62 RRRYD 66
>sp|A0AIS3|DNAJ_LISW6 Chaperone protein DnaJ OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1
Length = 376
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S A+ EIK+AYRKL K+YHPDI + G + ++EAY+VL R
Sbjct: 3 KRDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 AQYD 66
>sp|Q03FR6|DNAJ_PEDPA Chaperone protein DnaJ OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=dnaJ PE=3 SV=1
Length = 374
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLRK 107
K+YY++LGVS +A+ EIK+AYRKL KKYHPDI E +NEAY+VL R
Sbjct: 5 KDYYDILGVSKDASDDEIKKAYRKLSKKYHPDINKAPDAEQKFKDVNEAYEVLGDSQKRA 64
Query: 108 DYD 110
YD
Sbjct: 65 QYD 67
>sp|A4SFR5|DNAJ_PROVI Chaperone protein DnaJ OS=Prosthecochloris vibrioformis (strain DSM
265) GN=dnaJ PE=3 SV=1
Length = 396
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPD--IAGQKGHEHTLLLNEAYKVLMRGDL 105
KK+YYE+LGV A+ EIK+AYRKL KYHPD + +H +NEAY+VL D
Sbjct: 2 KKDYYEILGVGRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDK 61
Query: 106 RKDYD 110
R+ YD
Sbjct: 62 RRRYD 66
>sp|A8FFD1|DNAJ_BACP2 Chaperone protein DnaJ OS=Bacillus pumilus (strain SAFR-032)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LGVS A+ EIK+AYRKL KKYHPDI + G + + EAY+ L R
Sbjct: 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 SQYD 66
>sp|Q05646|DNAJ_ERYRH Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ PE=2
SV=1
Length = 370
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 46 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGD 104
+ K+++YE+LGVS A EIK+AYR+L KKYHPDI + G E + EAY+VL
Sbjct: 2 ADKRDFYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQ 61
Query: 105 LRKDYD 110
R +YD
Sbjct: 62 KRANYD 67
>sp|Q3AQP5|DNAJ_CHLCH Chaperone protein DnaJ OS=Chlorobium chlorochromatii (strain CaD3)
GN=dnaJ PE=3 SV=1
Length = 400
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPD--IAGQKGHEHTLLLNEAYKVLMRGDL 105
KK+YYE LGV+ +N +IK+AYRKL +YHPD ++ EH +NEAY+VL D
Sbjct: 2 KKDYYETLGVTRSSNKDDIKKAYRKLAVQYHPDKNPGNKEAEEHFKEVNEAYEVLSNDDK 61
Query: 106 RKDYD 110
R+ YD
Sbjct: 62 RRRYD 66
>sp|Q2GI75|DNAJ_EHRCR Chaperone protein DnaJ OS=Ehrlichia chaffeensis (strain Arkansas)
GN=dnaJ PE=3 SV=1
Length = 380
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPD--IAGQKGHEHTLLLNEAYKVLMRGDL 105
K +YY+LLGVS A +EIK+AYRK+ KYHPD ++ E L+EAY VL+ D
Sbjct: 3 KSDYYDLLGVSKSATPEEIKKAYRKMALKYHPDKNPGNKEAEEKFKELSEAYDVLIDQDK 62
Query: 106 RKDYDA-------SIGQMRFHFGTNASAGFS 129
R YD S G+ F F + S FS
Sbjct: 63 RAAYDKYGHNAFDSSGRGGFDFNSGFSGDFS 93
>sp|Q2JH49|DNAJ_SYNJB Chaperone protein DnaJ OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=dnaJ PE=3 SV=1
Length = 394
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLRK 107
++YYE+LGVS +++ +EIK AYR+L +KYHPD+ + G E +N AY+VL +L+
Sbjct: 3 RDYYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSDNELKA 62
Query: 108 DYD 110
YD
Sbjct: 63 RYD 65
>sp|B0JW23|DNAJ_MICAN Chaperone protein DnaJ OS=Microcystis aeruginosa (strain NIES-843)
GN=dnaJ PE=3 SV=1
Length = 374
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 50 NYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKG-HEHTLLLNEAYKVLMRGDLRKD 108
+YYE+LGVS +A ++IK AYR+L +KYHPD+ + G EH +N AY++L + R
Sbjct: 4 DYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNR 63
Query: 109 YD 110
YD
Sbjct: 64 YD 65
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLRK 107
+++YE+LGVS A+ +E+K AYR+L +KYHPD+ + G E +N AY+VL R
Sbjct: 3 RDFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARA 62
Query: 108 DYD-------ASIGQMRF-HFGTNASAGFS 129
+YD + +G F FG GF+
Sbjct: 63 NYDRFGEAGVSGVGAAGFSDFGIGDMGGFA 92
>sp|B7KEJ8|DNAJ_CYAP7 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ
PE=3 SV=1
Length = 375
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 50 NYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLRKD 108
+YYE+LGVS +AN EIK AYR+L +KYHPD+ + G E +N AY++L + R
Sbjct: 4 DYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRAR 63
Query: 109 YD 110
YD
Sbjct: 64 YD 65
>sp|A5UYW4|DNAJ_ROSS1 Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ
PE=3 SV=1
Length = 370
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LGV A+ EIK+A+R+L ++YHPD+ E +NEAY+VL + R
Sbjct: 4 KRDYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKR 63
Query: 107 KDYDASIGQMRF-HFGTNASAGFSRSSWKGP 136
YD RF H G A+ GF S P
Sbjct: 64 SMYD------RFGHAGPTAAPGFDPFSSADP 88
>sp|P45555|DNAJ_STAAU Chaperone protein DnaJ OS=Staphylococcus aureus GN=dnaJ PE=3 SV=1
Length = 379
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LG+S +A+ EIK+AYRKL KKYHPDI ++G + ++EAY+VL + R
Sbjct: 3 KRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKR 62
Query: 107 KDYD 110
D
Sbjct: 63 ATID 66
>sp|B2J3J3|DNAJ_NOSP7 Chaperone protein DnaJ OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=dnaJ PE=3 SV=1
Length = 375
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 13/85 (15%)
Query: 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLRK 107
++YYE+LGVS + + +E+K+AYR+L +KYHPD+ + G E +N AY+VL + R
Sbjct: 3 RDYYEILGVSRDTDKEELKQAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSEPETRA 62
Query: 108 DYDASIGQMRFHFG----TNASAGF 128
YD FG + A AGF
Sbjct: 63 RYD--------RFGPEGVSGAGAGF 79
>sp|A7Z6W0|DNAJ_BACA2 Chaperone protein DnaJ OS=Bacillus amyloliquefaciens (strain FZB42)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLL-LNEAYKVLMRGDLR 106
K++YYE+LGVS A+ EIK+AYRKL KKYHPDI + G + + EAY+ L R
Sbjct: 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKR 62
Query: 107 KDYD 110
YD
Sbjct: 63 AQYD 66
>sp|P40358|JEM1_YEAST DnaJ-like chaperone JEM1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=JEM1 PE=1 SV=3
Length = 645
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 41 AGERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPD-------IAGQKGHEHTLLL 93
A KK+YY++LGVS A+ +EI++AY L KKYHPD + HE +
Sbjct: 529 AAPNYDPKKDYYKILGVSPSASSKEIRKAYLNLTKKYHPDKIKANHNDKQESIHETMSQI 588
Query: 94 NEAYKVLMRGDLRKDYDAS 112
NEAY+ L D RK+YD S
Sbjct: 589 NEAYETLSDDDKRKEYDLS 607
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,332,408
Number of Sequences: 539616
Number of extensions: 3438551
Number of successful extensions: 9259
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 7995
Number of HSP's gapped (non-prelim): 1072
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)