Query 027429
Match_columns 223
No_of_seqs 230 out of 2176
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 09:48:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027429.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027429hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 1.4E-29 3E-34 229.3 9.9 168 47-223 2-186 (371)
2 KOG0712 Molecular chaperone (D 99.9 3.6E-27 7.7E-32 211.2 8.8 166 47-223 2-173 (337)
3 PRK14296 chaperone protein Dna 99.9 3.9E-24 8.5E-29 195.9 10.9 174 47-223 2-195 (372)
4 PRK14288 chaperone protein Dna 99.9 2.3E-24 5.1E-29 197.2 8.6 159 48-216 2-175 (369)
5 PTZ00037 DnaJ_C chaperone prot 99.9 2.9E-24 6.3E-29 199.4 9.0 167 43-223 22-195 (421)
6 PRK14286 chaperone protein Dna 99.9 6.4E-24 1.4E-28 194.6 10.4 169 48-223 3-192 (372)
7 PRK14287 chaperone protein Dna 99.9 1.2E-23 2.5E-28 192.7 9.8 168 48-223 3-184 (371)
8 PRK14282 chaperone protein Dna 99.9 2.3E-23 5E-28 190.6 11.4 174 47-223 2-198 (369)
9 PRK14276 chaperone protein Dna 99.9 2.4E-23 5.2E-28 191.2 11.1 169 48-218 3-188 (380)
10 KOG0713 Molecular chaperone (D 99.9 1E-23 2.2E-28 187.4 6.9 74 45-118 12-87 (336)
11 PRK14285 chaperone protein Dna 99.9 4.4E-23 9.6E-28 188.6 10.9 167 49-223 3-188 (365)
12 PRK14298 chaperone protein Dna 99.9 4.7E-23 1E-27 189.1 10.6 171 48-223 4-187 (377)
13 PRK14280 chaperone protein Dna 99.9 1.1E-22 2.4E-27 186.6 10.7 171 48-223 3-189 (376)
14 PRK14279 chaperone protein Dna 99.9 1.5E-22 3.2E-27 186.7 11.4 160 48-209 8-205 (392)
15 PRK14297 chaperone protein Dna 99.9 8.4E-23 1.8E-27 187.6 9.6 168 48-217 3-189 (380)
16 PRK14277 chaperone protein Dna 99.9 1.2E-22 2.5E-27 187.1 9.7 169 48-219 4-198 (386)
17 TIGR02349 DnaJ_bact chaperone 99.9 1.7E-22 3.7E-27 183.9 10.3 171 50-223 1-189 (354)
18 PRK14299 chaperone protein Dna 99.9 2.9E-22 6.3E-27 178.1 11.2 145 48-194 3-167 (291)
19 PRK14291 chaperone protein Dna 99.9 2.4E-22 5.2E-27 184.7 10.8 159 48-209 2-188 (382)
20 PRK14278 chaperone protein Dna 99.9 2.8E-22 6.1E-27 184.1 9.9 164 49-217 3-180 (378)
21 PRK10767 chaperone protein Dna 99.9 5.2E-22 1.1E-26 181.8 10.8 165 48-223 3-184 (371)
22 PRK14294 chaperone protein Dna 99.9 4E-22 8.7E-27 182.3 9.9 168 47-223 2-186 (366)
23 PRK14284 chaperone protein Dna 99.9 9.3E-22 2E-26 181.3 11.4 167 49-223 1-200 (391)
24 PRK14283 chaperone protein Dna 99.9 1.2E-21 2.6E-26 179.8 10.6 168 47-217 3-187 (378)
25 PRK14301 chaperone protein Dna 99.9 1.1E-21 2.4E-26 179.9 8.8 161 48-217 3-181 (373)
26 PRK14290 chaperone protein Dna 99.8 2.5E-21 5.5E-26 177.0 9.6 164 49-217 3-187 (365)
27 PRK14295 chaperone protein Dna 99.8 6.1E-21 1.3E-25 175.8 11.4 160 48-209 8-198 (389)
28 PRK14281 chaperone protein Dna 99.8 4E-21 8.8E-26 177.4 9.1 166 49-218 3-204 (397)
29 PRK14289 chaperone protein Dna 99.8 1.2E-20 2.7E-25 173.6 10.1 166 48-217 4-195 (386)
30 PRK14292 chaperone protein Dna 99.8 1.1E-20 2.5E-25 173.0 9.6 164 49-218 2-182 (371)
31 PRK14293 chaperone protein Dna 99.8 2.5E-20 5.4E-25 170.9 10.1 164 49-218 3-185 (374)
32 PRK14300 chaperone protein Dna 99.8 2.8E-20 6E-25 170.6 9.9 166 49-223 3-187 (372)
33 PRK10266 curved DNA-binding pr 99.8 1.1E-19 2.5E-24 162.5 12.4 143 48-193 3-168 (306)
34 KOG0717 Molecular chaperone (D 99.7 8.1E-19 1.7E-23 161.1 4.7 74 45-118 4-80 (508)
35 KOG0715 Molecular chaperone (D 99.7 2.9E-18 6.3E-23 152.3 8.0 73 43-115 37-110 (288)
36 KOG0716 Molecular chaperone (D 99.7 3.4E-18 7.3E-23 148.2 7.1 69 47-115 29-99 (279)
37 PF00226 DnaJ: DnaJ domain; I 99.7 3.1E-18 6.8E-23 118.8 5.4 61 50-110 1-64 (64)
38 KOG0691 Molecular chaperone (D 99.7 7E-17 1.5E-21 143.3 6.4 69 48-116 4-74 (296)
39 PTZ00341 Ring-infected erythro 99.6 2.3E-16 5.1E-21 155.8 7.7 71 45-115 569-640 (1136)
40 smart00271 DnaJ DnaJ molecular 99.6 3.4E-16 7.5E-21 106.8 6.3 57 49-105 1-60 (60)
41 KOG0718 Molecular chaperone (D 99.6 2.1E-16 4.6E-21 145.5 6.1 71 46-116 6-81 (546)
42 cd06257 DnaJ DnaJ domain or J- 99.6 4.6E-16 1E-20 104.3 5.7 53 50-102 1-55 (55)
43 KOG0719 Molecular chaperone (D 99.6 4E-16 8.6E-21 132.9 5.2 67 48-114 13-83 (264)
44 COG2214 CbpA DnaJ-class molecu 99.6 3.3E-15 7.2E-20 123.6 6.0 66 47-112 4-72 (237)
45 PHA03102 Small T antigen; Revi 99.6 2.2E-15 4.9E-20 122.2 4.7 66 49-116 5-72 (153)
46 KOG0721 Molecular chaperone (D 99.6 4.9E-15 1.1E-19 125.0 6.9 72 44-115 94-167 (230)
47 KOG0624 dsRNA-activated protei 99.6 6.1E-15 1.3E-19 132.6 6.7 70 45-114 390-464 (504)
48 TIGR03835 termin_org_DnaJ term 99.5 6E-15 1.3E-19 143.1 5.1 66 49-114 2-68 (871)
49 PRK05014 hscB co-chaperone Hsc 99.5 4.1E-14 9E-19 117.0 6.9 66 49-114 1-75 (171)
50 PRK01356 hscB co-chaperone Hsc 99.5 5E-14 1.1E-18 116.0 6.3 66 49-114 2-74 (166)
51 PRK00294 hscB co-chaperone Hsc 99.4 1.7E-13 3.7E-18 113.5 7.2 69 46-114 1-78 (173)
52 PRK03578 hscB co-chaperone Hsc 99.4 2.3E-13 5E-18 113.0 7.1 67 48-114 5-80 (176)
53 PTZ00100 DnaJ chaperone protei 99.4 3.8E-13 8.3E-18 104.2 5.8 59 41-101 57-115 (116)
54 KOG0720 Molecular chaperone (D 99.4 2.7E-13 5.8E-18 125.0 5.2 72 43-114 229-301 (490)
55 KOG0550 Molecular chaperone (D 99.3 6.9E-13 1.5E-17 121.3 3.5 69 45-113 369-440 (486)
56 KOG0722 Molecular chaperone (D 99.3 6.6E-13 1.4E-17 114.7 2.8 68 48-115 32-100 (329)
57 KOG0714 Molecular chaperone (D 99.3 1.4E-12 3E-17 113.0 3.5 67 48-114 2-71 (306)
58 PRK09430 djlA Dna-J like membr 99.3 2.6E-12 5.6E-17 113.2 5.2 57 46-102 197-262 (267)
59 PHA02624 large T antigen; Prov 99.2 9.8E-12 2.1E-16 119.4 5.2 60 48-109 10-71 (647)
60 PRK01773 hscB co-chaperone Hsc 99.1 7E-11 1.5E-15 97.9 6.4 66 49-114 2-76 (173)
61 COG5407 SEC63 Preprotein trans 99.0 1.3E-10 2.9E-15 107.2 3.9 68 48-115 97-171 (610)
62 TIGR00714 hscB Fe-S protein as 99.0 7.3E-10 1.6E-14 90.5 6.3 54 61-114 3-63 (157)
63 KOG1150 Predicted molecular ch 98.9 2.6E-09 5.7E-14 89.6 4.8 63 48-110 52-117 (250)
64 COG5269 ZUO1 Ribosome-associat 98.6 2.5E-08 5.4E-13 87.3 3.6 66 47-112 41-113 (379)
65 KOG0723 Molecular chaperone (D 98.5 1.5E-07 3.3E-12 71.4 5.2 65 37-103 44-108 (112)
66 KOG1789 Endocytosis protein RM 98.4 3.8E-07 8.3E-12 91.6 5.5 58 43-101 1275-1336(2235)
67 KOG0568 Molecular chaperone (D 98.4 3.9E-07 8.6E-12 78.3 4.8 56 47-102 45-102 (342)
68 KOG3192 Mitochondrial J-type c 97.7 4.4E-05 9.5E-10 62.0 3.7 68 46-113 5-81 (168)
69 PF13459 Fer4_15: 4Fe-4S singl 96.9 0.00015 3.3E-09 50.3 -0.7 53 143-196 2-65 (65)
70 COG1076 DjlA DnaJ-domain-conta 96.9 0.00052 1.1E-08 56.8 1.7 52 49-100 113-173 (174)
71 COG1141 Fer Ferredoxin [Energy 96.8 0.00017 3.7E-09 51.0 -1.5 55 142-197 3-67 (68)
72 KOG0431 Auxilin-like protein a 96.1 0.0075 1.6E-07 57.2 4.5 44 57-100 396-448 (453)
73 COG1076 DjlA DnaJ-domain-conta 96.0 0.0046 9.9E-08 51.2 2.4 64 51-114 3-75 (174)
74 PF03656 Pam16: Pam16; InterP 95.6 0.014 3E-07 46.2 3.7 58 45-104 54-111 (127)
75 PF13370 Fer4_13: 4Fe-4S singl 95.2 0.0016 3.4E-08 44.3 -2.7 52 145-196 2-58 (58)
76 PF11833 DUF3353: Protein of u 89.1 0.81 1.8E-05 38.7 5.1 38 58-101 1-38 (194)
77 PF13446 RPT: A repeated domai 88.6 0.84 1.8E-05 31.0 4.1 46 48-102 4-49 (62)
78 KOG0724 Zuotin and related mol 82.7 1.6 3.5E-05 39.3 4.0 52 61-112 4-61 (335)
79 PF14687 DUF4460: Domain of un 80.0 3.9 8.4E-05 31.6 4.7 43 60-102 5-53 (112)
80 PF12797 Fer4_2: 4Fe-4S bindin 78.7 0.8 1.7E-05 25.3 0.4 18 141-158 2-19 (22)
81 PF06902 Fer4_19: Divergent 4F 56.6 2 4.4E-05 29.8 -1.3 54 141-198 7-63 (64)
82 KOG3442 Uncharacterized conser 49.1 23 0.00049 28.0 3.3 39 46-84 56-94 (132)
83 KOG3256 NADH:ubiquinone oxidor 48.7 15 0.00033 30.6 2.4 67 131-197 95-170 (212)
84 PF10041 DUF2277: Uncharacteri 43.3 1.2E+02 0.0027 21.8 6.1 54 49-102 3-61 (78)
85 COG5552 Uncharacterized conser 40.5 90 0.002 22.5 5.0 32 49-80 3-34 (88)
86 PF14697 Fer4_21: 4Fe-4S diclu 39.9 11 0.00024 25.4 0.3 17 144-160 3-19 (59)
87 PF07709 SRR: Seven Residue Re 39.8 19 0.00041 17.3 1.1 13 89-101 2-14 (14)
88 COG2879 Uncharacterized small 37.4 54 0.0012 22.8 3.4 26 69-94 27-52 (65)
89 COG0437 HybA Fe-S-cluster-cont 36.9 27 0.00059 29.8 2.3 24 140-163 11-34 (203)
90 PF12434 Malate_DH: Malate deh 35.5 45 0.00098 19.3 2.3 18 62-79 9-26 (28)
91 PF01556 CTDII: DnaJ C termina 34.7 46 0.001 23.5 2.9 37 156-193 1-37 (81)
92 PRK09623 vorD 2-ketoisovalerat 33.2 29 0.00063 26.0 1.7 56 142-200 46-104 (105)
93 PF12837 Fer4_6: 4Fe-4S bindin 32.0 8.8 0.00019 21.3 -1.0 18 143-160 3-20 (24)
94 cd00084 HMG-box High Mobility 31.1 96 0.0021 20.0 3.9 43 67-112 12-54 (66)
95 cd01388 SOX-TCF_HMG-box SOX-TC 28.8 1E+02 0.0022 21.1 3.8 42 68-112 14-55 (72)
96 PF08844 DUF1815: Domain of un 27.7 1.2E+02 0.0025 23.0 4.0 40 168-208 43-82 (105)
97 cd01390 HMGB-UBF_HMG-box HMGB- 25.8 1.3E+02 0.0029 19.5 3.9 40 69-111 14-53 (66)
98 PRK08348 NADH-plastoquinone ox 25.3 31 0.00068 26.2 0.7 20 142-161 37-56 (120)
99 PF00505 HMG_box: HMG (high mo 25.0 1.2E+02 0.0026 20.0 3.6 42 67-111 12-53 (69)
100 COG1144 Pyruvate:ferredoxin ox 24.6 81 0.0018 23.5 2.7 58 142-200 30-89 (91)
101 cd01389 MATA_HMG-box MATA_HMG- 23.2 1.4E+02 0.003 20.6 3.7 42 67-111 13-54 (77)
102 PF08447 PAS_3: PAS fold; Int 22.4 25 0.00053 24.2 -0.4 29 49-81 6-35 (91)
103 CHL00065 psaC photosystem I su 22.0 36 0.00078 23.9 0.4 61 145-205 7-74 (81)
104 COG3719 Rna Ribonuclease I [Tr 21.5 1.9E+02 0.0042 25.4 4.9 85 14-111 92-176 (249)
105 TIGR03835 termin_org_DnaJ term 20.9 1.1E+02 0.0023 31.6 3.5 39 155-193 657-707 (871)
106 COG1146 Ferredoxin [Energy pro 20.6 1.4E+02 0.003 20.1 3.2 55 144-201 5-65 (68)
107 PRK14028 pyruvate ferredoxin o 20.2 3.6E+02 0.0079 23.9 6.6 19 143-161 243-261 (312)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.4e-29 Score=229.33 Aligned_cols=168 Identities=26% Similarity=0.261 Sum_probs=120.3
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CchhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCCCC
Q 027429 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAG--QKGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNA 124 (223)
Q Consensus 47 ~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~--~~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~~~ 124 (223)
..+|||+||||+++||.+|||+|||+||++||||+|+ ++|+++|++|+|||+||+||++|+.||+++.....+.+
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg--- 78 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGG--- 78 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCC---
Confidence 5689999999999999999999999999999999999 35889999999999999999999999998765543111
Q ss_pred CCCCCCCCCCCCCCCCCccccccccc---------cCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec-----C
Q 027429 125 SAGFSRSSWKGPPRPEALFVDENACI---------GCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI-----P 190 (223)
Q Consensus 125 ~~~~~~~~~~g~~~~~~~f~~e~~~i---------gc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai-----P 190 (223)
+++++++.+.+ ++.++|.+.+... .-+.-++.+.++++|+|++.|..+.+.+. ......+| .
T Consensus 79 ~gg~g~~~fgg--~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~--~~~~C~~C~GsGak 154 (371)
T COG0484 79 FGGFGFGGFGG--DFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVT--RSVTCSTCHGSGAK 154 (371)
T ss_pred cCCCCcCCCCC--CHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecc--eeeECCcCCCCCCC
Confidence 22224444443 3334443322100 11223789999999999999999999884 23333455 3
Q ss_pred CC-cEEeeecccCCceEeehhhhhhhhhhhccCC
Q 027429 191 LN-RISANRKYIEQNIYLFIWFIRGMVHKLSGFC 223 (223)
Q Consensus 191 ~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (223)
.+ ...-+..|+|.+++....-. ++-.++..|
T Consensus 155 ~gt~~~tC~tC~G~G~v~~~~~~--g~~~~~~~C 186 (371)
T COG0484 155 PGTDPKTCPTCNGSGQVRTVQRT--GFFSFQQTC 186 (371)
T ss_pred CCCCCCcCCCCCCcCeEEEEEee--eEEEEEEEC
Confidence 33 56777889999887665422 344444444
No 2
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=3.6e-27 Score=211.16 Aligned_cols=166 Identities=25% Similarity=0.207 Sum_probs=124.6
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCCCCCC
Q 027429 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNASA 126 (223)
Q Consensus 47 ~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~~~~~ 126 (223)
..+.+|+||||+++|+.+|||+|||+|+++||||||+. +.++|++|++||++|+||++|+.||+.+.+.....+.+ ++
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~-~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~-~g 79 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD-AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG-GG 79 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc-HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC-CC
Confidence 35789999999999999999999999999999999987 68999999999999999999999999986554221111 11
Q ss_pred CCCCCCCCCCCCCCCccccccccccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec-----CCCcEEeeeccc
Q 027429 127 GFSRSSWKGPPRPEALFVDENACIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI-----PLNRISANRKYI 201 (223)
Q Consensus 127 ~~~~~~~~g~~~~~~~f~~e~~~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai-----P~~~i~~~~~~~ 201 (223)
.++|+.|.+ |........-+.-++...+.++++|.|.|......+. .+.|...| ..++.--++.|.
T Consensus 80 ~~~f~~~F~-------~g~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~--~~~iCs~C~GsGgksg~~~~C~~C~ 150 (337)
T KOG0712|consen 80 FGGFSQFFG-------FGGNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLS--RNFICSKCSGSGGKSGSAPKCTTCR 150 (337)
T ss_pred CccHHHhcc-------CCCcCccccccCCCceEEEEEEHHHhhcCCccceecc--cCccCCcCCCCCCCCCCCCCCCCCC
Confidence 111333322 1111111111134788899999999999977777764 35565555 344444678899
Q ss_pred CCceEeehh-hhhhhhhhhccCC
Q 027429 202 EQNIYLFIW-FIRGMVHKLSGFC 223 (223)
Q Consensus 202 ~~~~~~~~~-~~~~~~~~~~~~~ 223 (223)
|.++.+..+ +.+|||++++..|
T Consensus 151 GsGv~~~~~~~gPg~~qs~q~~C 173 (337)
T KOG0712|consen 151 GSGVQTRTRQMGPGMVQSPQLVC 173 (337)
T ss_pred CCCceeEEEeccccccccceeEe
Confidence 999998888 9999999999888
No 3
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.91 E-value=3.9e-24 Score=195.93 Aligned_cols=174 Identities=27% Similarity=0.272 Sum_probs=112.2
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhccccccc-C-CC
Q 027429 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHF-G-TN 123 (223)
Q Consensus 47 ~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~-~-~~ 123 (223)
..+|||+||||+++|+.+|||+|||+||++||||++++ .++++|++|++||++|+||++|+.||+++.....+. + ++
T Consensus 2 ~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~ 81 (372)
T PRK14296 2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSS 81 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCc
Confidence 35799999999999999999999999999999999974 477899999999999999999999999765321110 0 00
Q ss_pred CCCCCC--CCCCC--CCCCCCCcccccccc------ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec----
Q 027429 124 ASAGFS--RSSWK--GPPRPEALFVDENAC------IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI---- 189 (223)
Q Consensus 124 ~~~~~~--~~~~~--g~~~~~~~f~~e~~~------igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai---- 189 (223)
.++++. |+.+. +.....++|...+.. ..-+..++...+.++|+|++.|..+.+.+. ...+...|
T Consensus 82 ~~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~--~~~~C~~C~G~G 159 (372)
T PRK14296 82 NFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELD--LLTNCSKCFGSG 159 (372)
T ss_pred CCCccccccccccccccccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEe--eeeccCCCCCCc
Confidence 111100 11010 111111222211110 011234788899999999999999998883 11222233
Q ss_pred --CCCcEEeeecccCCceEeehh-hhhhhhhhhccCC
Q 027429 190 --PLNRISANRKYIEQNIYLFIW-FIRGMVHKLSGFC 223 (223)
Q Consensus 190 --P~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 223 (223)
+-..+.-+..|.|.++++... +.+ |+.+++.-|
T Consensus 160 ~~~~~~~~~C~~C~G~G~~~~~~~~g~-~~~q~~~~C 195 (372)
T PRK14296 160 AESNSDIHICNNCHGTGEVLVQKNMGF-FQFQQSAKC 195 (372)
T ss_pred cCCCCCCccCCCCCCCceEEEEEeccc-eEEEEEecC
Confidence 222366788889988877654 444 333444443
No 4
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.90 E-value=2.3e-24 Score=197.22 Aligned_cols=159 Identities=23% Similarity=0.240 Sum_probs=108.4
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCCCCC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNAS 125 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~~~~ 125 (223)
..|||+||||+++|+.+|||+|||+||++||||+++. .++++|++|++||++|+||.+|+.||+++.....+.+.
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~--- 78 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGA--- 78 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCC---
Confidence 3799999999999999999999999999999999973 47889999999999999999999999976532111010
Q ss_pred CCCCCCCCCCCCCCCCccccccc--------cccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec-----CCC
Q 027429 126 AGFSRSSWKGPPRPEALFVDENA--------CIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI-----PLN 192 (223)
Q Consensus 126 ~~~~~~~~~g~~~~~~~f~~e~~--------~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai-----P~~ 192 (223)
++.+++.+.+ ....+|.+.+. -..-...++...+.++|+|++.|..+.+.+. ...+...| ..+
T Consensus 79 ~~~~~~~~f~--~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~--r~~~C~~C~G~G~~~~ 154 (369)
T PRK14288 79 SQSDFSDFFE--DLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQ--YQSVCESCDGTGAKDK 154 (369)
T ss_pred Cccccccchh--hHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEE--eeccCCCCCCcccCCC
Confidence 0111211110 11122221110 0001234788899999999999999988873 11122222 224
Q ss_pred cEEeeecccCCceEeehhhhhhhh
Q 027429 193 RISANRKYIEQNIYLFIWFIRGMV 216 (223)
Q Consensus 193 ~i~~~~~~~~~~~~~~~~~~~~~~ 216 (223)
++.-+..|.|.+++.... |++
T Consensus 155 ~~~~C~~C~G~G~~~~~~---g~~ 175 (369)
T PRK14288 155 ALETCKQCNGQGQVFMRQ---GFM 175 (369)
T ss_pred CCcCCCCCCCCcEEEEEe---ceE
Confidence 577889999999876552 666
No 5
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.90 E-value=2.9e-24 Score=199.41 Aligned_cols=167 Identities=23% Similarity=0.239 Sum_probs=116.3
Q ss_pred CCCCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCC
Q 027429 43 ERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGT 122 (223)
Q Consensus 43 ~~~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~ 122 (223)
++.+..+|||+||||+++|+.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.||+++.....+
T Consensus 22 ~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~--~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~--- 96 (421)
T PTZ00037 22 KREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD--PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEG--- 96 (421)
T ss_pred cccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch--HHHHHHHHHHHHHhccHHHHHHHhhhcchhccc---
Confidence 334556899999999999999999999999999999999864 589999999999999999999999875432110
Q ss_pred CCCCCCCCCCCCCCCCCC-Cccccccc-cccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec-----CCCcEE
Q 027429 123 NASAGFSRSSWKGPPRPE-ALFVDENA-CIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI-----PLNRIS 195 (223)
Q Consensus 123 ~~~~~~~~~~~~g~~~~~-~~f~~e~~-~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai-----P~~~i~ 195 (223)
+. +...| .+.+ .+|..... -...+..++...+.++|+|++.|..+.+.+.. ..+...| +.+.+.
T Consensus 97 ~~----~~~d~---~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r--~~~C~~C~G~G~~~~~~~ 167 (421)
T PTZ00037 97 GE----QPADA---SDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINK--DVICANCEGHGGPKDAFV 167 (421)
T ss_pred CC----CCcch---hhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeec--cccccccCCCCCCCCCCc
Confidence 00 00111 1111 12221000 00112347888999999999999999988741 1222223 445677
Q ss_pred eeecccCCceEeehhhhhhhhhhhccCC
Q 027429 196 ANRKYIEQNIYLFIWFIRGMVHKLSGFC 223 (223)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (223)
-+..|.|.++++...-+-.|+.+++..|
T Consensus 168 ~C~~C~G~G~~~~~~~~g~~~~q~~~~C 195 (421)
T PTZ00037 168 DCKLCNGQGIRVQIRQMGSMIHQTQSTC 195 (421)
T ss_pred cCCCCCCCCeEEEEEeecceeeEEEEeC
Confidence 8899999998776653333777777665
No 6
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.90 E-value=6.4e-24 Score=194.55 Aligned_cols=169 Identities=22% Similarity=0.219 Sum_probs=112.4
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCCCCC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNAS 125 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~~~~ 125 (223)
..|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+++.....+ +.+.+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~-~~~~~ 81 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNA-GAGGF 81 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcc-ccCCC
Confidence 4799999999999999999999999999999999873 47789999999999999999999999976532111 00001
Q ss_pred CCCCCCCCC----CCCCCC-Ccccccc-c-------cccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec---
Q 027429 126 AGFSRSSWK----GPPRPE-ALFVDEN-A-------CIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI--- 189 (223)
Q Consensus 126 ~~~~~~~~~----g~~~~~-~~f~~e~-~-------~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai--- 189 (223)
++.++..|. ++.+.+ .+|.... . ...-+..++...+.++|+|++.|..+.+++.. ..+...|
T Consensus 82 ~~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r--~~~C~~C~G~ 159 (372)
T PRK14286 82 GQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPR--LESCVDCNGS 159 (372)
T ss_pred CCCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeec--cccCCCCcCC
Confidence 111111121 111111 2222110 0 00012347888999999999999999998841 2222223
Q ss_pred ---CCCcEEeeecccCCceEeehhhhhhhhhhhccCC
Q 027429 190 ---PLNRISANRKYIEQNIYLFIWFIRGMVHKLSGFC 223 (223)
Q Consensus 190 ---P~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (223)
+...++-+..|.|.+++... .||++ ++..|
T Consensus 160 G~~~~~~~~~C~~C~G~G~v~~~---~G~~~-~~~~C 192 (372)
T PRK14286 160 GASKGSSPTTCPDCGGSGQIRRT---QGFFS-VATTC 192 (372)
T ss_pred CcCCCCCCccCCCCcCeEEEEEE---eceEE-EEEeC
Confidence 22235678889999877665 37774 55454
No 7
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.90 E-value=1.2e-23 Score=192.74 Aligned_cols=168 Identities=22% Similarity=0.241 Sum_probs=113.7
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhccccc-ccCCCCC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-HFGTNAS 125 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~-~~~~~~~ 125 (223)
..|||+||||+++|+.+|||+|||+|+++||||++++ .++++|++|++||++|+||.+|+.||+++..... ++++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~--- 79 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGG--- 79 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCC---
Confidence 4799999999999999999999999999999999874 4678999999999999999999999998653221 1111
Q ss_pred CCCCCCCCCCCCCCC-Ccccccccc----ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec------CCCcE
Q 027429 126 AGFSRSSWKGPPRPE-ALFVDENAC----IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI------PLNRI 194 (223)
Q Consensus 126 ~~~~~~~~~g~~~~~-~~f~~e~~~----igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai------P~~~i 194 (223)
.+++.+.++.+.+ .+|.....- ..-...++...+.++|+|++.|..+.+++.. ..+...| +...+
T Consensus 80 --~~~~~f~~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r--~~~C~~C~G~G~~~~~~~ 155 (371)
T PRK14287 80 --GGAGDFGGFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPR--EETCGTCHGSGAKPGTKP 155 (371)
T ss_pred --CCCccccchHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEee--eccCCCCCCcccCCCCCC
Confidence 0111111111111 223211000 0012347888999999999999999988831 1122222 11225
Q ss_pred EeeecccCCceEeehh-hhhhhhhhhccCC
Q 027429 195 SANRKYIEQNIYLFIW-FIRGMVHKLSGFC 223 (223)
Q Consensus 195 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 223 (223)
.-+..|.|.+++.... +.+||+++ +..|
T Consensus 156 ~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C 184 (371)
T PRK14287 156 ETCSHCGGSGQLNVEQNTPFGRVVN-RRVC 184 (371)
T ss_pred cccCCCCCEEEEEEEEecCCceEEE-EEeC
Confidence 5688899998766543 77888875 4455
No 8
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.89 E-value=2.3e-23 Score=190.65 Aligned_cols=174 Identities=22% Similarity=0.210 Sum_probs=114.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---chhHHHHHHHHHHHHhhcccchhhhhhhhccccccc-CC
Q 027429 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ---KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHF-GT 122 (223)
Q Consensus 47 ~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~---~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~-~~ 122 (223)
..+|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+++....... ..
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~ 81 (369)
T PRK14282 2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE 81 (369)
T ss_pred CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccccccc
Confidence 35799999999999999999999999999999999863 367899999999999999999999999764322110 00
Q ss_pred -CCCCC---CCCCCCCCCC--CCC-Ccccccccc-----ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec-
Q 027429 123 -NASAG---FSRSSWKGPP--RPE-ALFVDENAC-----IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI- 189 (223)
Q Consensus 123 -~~~~~---~~~~~~~g~~--~~~-~~f~~e~~~-----igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai- 189 (223)
+..++ ..+..|.... +.+ .+|...... ..-...++...+.++|+|++.|..+.+++. ...+...|
T Consensus 82 ~~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~--r~~~C~~C~ 159 (369)
T PRK14282 82 TESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYD--RYETCPHCG 159 (369)
T ss_pred CCCCCcccccccccccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEee--ecccCCCCC
Confidence 00000 0011221111 111 122210000 001224788899999999999999998883 11122222
Q ss_pred -----CCCcEEeeecccCCceEeehh-hhhhhhhhhccCC
Q 027429 190 -----PLNRISANRKYIEQNIYLFIW-FIRGMVHKLSGFC 223 (223)
Q Consensus 190 -----P~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 223 (223)
+...+.-+..|.|.++++... +.+||+++ +..|
T Consensus 160 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C 198 (369)
T PRK14282 160 GTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVS-ERTC 198 (369)
T ss_pred ccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEE-EEEC
Confidence 222356788999999877654 77788764 3344
No 9
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.89 E-value=2.4e-23 Score=191.22 Aligned_cols=169 Identities=27% Similarity=0.295 Sum_probs=112.2
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhccccc-ccCC--C
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-HFGT--N 123 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~-~~~~--~ 123 (223)
.+|||+||||+++|+.+|||+|||+|+++||||++++ .++++|++|++||++|+||.+|+.||+++..... ++++ +
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~ 82 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG 82 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence 4799999999999999999999999999999999874 4778999999999999999999999997654321 1111 0
Q ss_pred CCCCCCC-CCCCCCCCCC-Cccccccc----cccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec------CC
Q 027429 124 ASAGFSR-SSWKGPPRPE-ALFVDENA----CIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI------PL 191 (223)
Q Consensus 124 ~~~~~~~-~~~~g~~~~~-~~f~~e~~----~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai------P~ 191 (223)
.++++.+ ..+.++.+.+ .+|..... -..-...++...+.++|+|++.|..+.+.+.. ..+...| +-
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~--~~~C~~C~G~G~~~~ 160 (380)
T PRK14276 83 GFGGFDGSGGFGGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNR--EATCHTCNGSGAKPG 160 (380)
T ss_pred CCCCccccccccchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeec--cccCCCCcCcccCCC
Confidence 0111100 0111111111 22221000 00012347888999999999999999998841 1222223 12
Q ss_pred CcEEeeecccCCceEeehh-hhhhhhhh
Q 027429 192 NRISANRKYIEQNIYLFIW-FIRGMVHK 218 (223)
Q Consensus 192 ~~i~~~~~~~~~~~~~~~~-~~~~~~~~ 218 (223)
..+.-+..|.|.+++.... +.+||+++
T Consensus 161 ~~~~~C~~C~G~G~~~~~~~~~~G~~~~ 188 (380)
T PRK14276 161 TSPVTCGKCHGSGVITVDTQTPLGMMRR 188 (380)
T ss_pred CCCccCCCCCCeeEEEEEEecCCceEEE
Confidence 2256688889988776553 66788765
No 10
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=1e-23 Score=187.43 Aligned_cols=74 Identities=42% Similarity=0.579 Sum_probs=67.6
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hhHHHHHHHHHHHHhhcccchhhhhhhhccccc
Q 027429 45 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF 118 (223)
Q Consensus 45 ~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~--a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~ 118 (223)
....+|||+||||+++|+..|||+|||+||+++|||+|+++ |.+.|++|+.||+||+||++|+.||+.+.....
T Consensus 12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~ 87 (336)
T KOG0713|consen 12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLK 87 (336)
T ss_pred hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhc
Confidence 34569999999999999999999999999999999999854 789999999999999999999999999865544
No 11
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.89 E-value=4.4e-23 Score=188.58 Aligned_cols=167 Identities=21% Similarity=0.189 Sum_probs=112.4
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhcccccc-cCCCCC
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFH-FGTNAS 125 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~-~~~~~~ 125 (223)
+|||+||||+++|+.+|||+|||+|+++||||+++. .+.++|++|++||++|+||.+|..||+++.....+ .+.+.+
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~~ 82 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCcccc
Confidence 799999999999999999999999999999999874 36789999999999999999999999976532111 010001
Q ss_pred CCCCCCCCCCC-CCCCCcccccccc--------ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEE-ec------
Q 027429 126 AGFSRSSWKGP-PRPEALFVDENAC--------IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEV-KI------ 189 (223)
Q Consensus 126 ~~~~~~~~~g~-~~~~~~f~~e~~~--------igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~-ai------ 189 (223)
. .++..+.+. .+..++|...+.. ..-+..++...+.++|+|++.|..+.+++. ..+.+ .|
T Consensus 83 ~-~g~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~---r~~~C~~C~G~G~~ 158 (365)
T PRK14285 83 S-GGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINIT---RNMLCESCLGKKSE 158 (365)
T ss_pred C-CCccccccccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEee---ecccCCCCCCcccC
Confidence 0 111111100 0111222211110 011234788899999999999999999884 22222 22
Q ss_pred CCCcEEeeecccCCceEeehhhhhhhhhhhccCC
Q 027429 190 PLNRISANRKYIEQNIYLFIWFIRGMVHKLSGFC 223 (223)
Q Consensus 190 P~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (223)
+...++-+..|.|.++++. .+||+ ++++.|
T Consensus 159 ~~~~~~~C~~C~G~G~~~~---~~G~~-~~~~~C 188 (365)
T PRK14285 159 KGTSPSICNMCNGSGRVMQ---GGGFF-RVTTTC 188 (365)
T ss_pred CCCCCccCCCccCceeEEe---cCcee-EEeeec
Confidence 2222567889999998775 46888 566655
No 12
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.89 E-value=4.7e-23 Score=189.13 Aligned_cols=171 Identities=22% Similarity=0.182 Sum_probs=114.5
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhccccc-ccCC-CC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-HFGT-NA 124 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~-~~~~-~~ 124 (223)
.+|||+||||+++|+.+|||+|||+|+++||||++++ .++++|++|++||++|+||.+|+.||+++..... ++++ +.
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~~ 83 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDI 83 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCcccc
Confidence 4799999999999999999999999999999999874 4678999999999999999999999997643211 1110 00
Q ss_pred CCCCCCCCCCCCCCCC-Cccccccc---cccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec------CCCcE
Q 027429 125 SAGFSRSSWKGPPRPE-ALFVDENA---CIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI------PLNRI 194 (223)
Q Consensus 125 ~~~~~~~~~~g~~~~~-~~f~~e~~---~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai------P~~~i 194 (223)
|.+.++ .+..+.+ .+|..... -..-+..++...+.++|+|++.|..+.+++.. ..+...| +-..+
T Consensus 84 ~~~~~~---~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r--~~~C~~C~G~G~~~~~~~ 158 (377)
T PRK14298 84 FRGADF---GGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPR--AERCSTCSGTGAKPGTSP 158 (377)
T ss_pred cccCCc---CcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEe--eccCCCCCCCcccCCCCC
Confidence 111111 1111111 22321000 00112347888999999999999999998831 1112222 12235
Q ss_pred EeeecccCCceEeehhhhhhhhhhhccCC
Q 027429 195 SANRKYIEQNIYLFIWFIRGMVHKLSGFC 223 (223)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (223)
+-+..|.|.++++...-.+++..+++..|
T Consensus 159 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C 187 (377)
T PRK14298 159 KRCPTCGGTGQVTTTRSTPLGQFVTTTTC 187 (377)
T ss_pred CcCCCCCCccEEEEEEecCceeEEEEEeC
Confidence 67888999998876654555555666655
No 13
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.88 E-value=1.1e-22 Score=186.60 Aligned_cols=171 Identities=26% Similarity=0.279 Sum_probs=113.1
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhccccc-ccCCCCC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-HFGTNAS 125 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~-~~~~~~~ 125 (223)
..|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+++..... +++++.+
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~~ 82 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF 82 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCCC
Confidence 4799999999999999999999999999999999874 4788999999999999999999999997653221 1111111
Q ss_pred CCCCCC-CCCCCCCCC-Cccccccc----cccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEE-ec------CCC
Q 027429 126 AGFSRS-SWKGPPRPE-ALFVDENA----CIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEV-KI------PLN 192 (223)
Q Consensus 126 ~~~~~~-~~~g~~~~~-~~f~~e~~----~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~-ai------P~~ 192 (223)
++.+|. .+ ++.+.+ .+|..... -..-...++...+.++|+|++.|..+.+.+. ..+.+ .| +..
T Consensus 83 ~~~~~~~~~-~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~---r~~~C~~C~G~G~~~~~ 158 (376)
T PRK14280 83 GGGDFGGGF-GFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIP---KEETCDTCHGSGAKPGT 158 (376)
T ss_pred CCCCccccc-cchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEe---eeccCCCCCCcccCCCC
Confidence 111111 01 111211 22221000 0001234788899999999999999998883 22222 22 112
Q ss_pred cEEeeecccCCceEeehh-hhhhhhhhhccCC
Q 027429 193 RISANRKYIEQNIYLFIW-FIRGMVHKLSGFC 223 (223)
Q Consensus 193 ~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 223 (223)
.++-+..|.|.+++.... +..||++. +..|
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C 189 (376)
T PRK14280 159 SKETCSHCGGSGQVSVEQNTPFGRVVN-RQTC 189 (376)
T ss_pred CCccCCCCCCEEEEEEEeecCCceEEE-EEEc
Confidence 366788899988766543 56677753 4344
No 14
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.88 E-value=1.5e-22 Score=186.70 Aligned_cols=160 Identities=24% Similarity=0.243 Sum_probs=104.4
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhcccc-cccCC--
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMR-FHFGT-- 122 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~-~~~~~-- 122 (223)
.+|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||++|+.||+++.... .+++.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~~ 87 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRR 87 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccccc
Confidence 4799999999999999999999999999999999873 377899999999999999999999999753211 01110
Q ss_pred ----CCCCCCCCCCCCCCCC---------------CCCcccccccccc--------CCcceeeeeeeEeeecccCceEEE
Q 027429 123 ----NASAGFSRSSWKGPPR---------------PEALFVDENACIG--------CRECVHHASNTFVMDEATGCARVK 175 (223)
Q Consensus 123 ----~~~~~~~~~~~~g~~~---------------~~~~f~~e~~~ig--------c~~c~~~a~~t~~~ee~~~g~~~~ 175 (223)
+.++++.++.+.+..+ ..++|...+.-.+ -...++...++++|+|++.|..+.
T Consensus 88 ~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~~ 167 (392)
T PRK14279 88 FDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMP 167 (392)
T ss_pred ccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEEE
Confidence 0011100000000000 1122221110000 123478889999999999999999
Q ss_pred eeeCCCCceEEEec------CCCcEEeeecccCCceEeeh
Q 027429 176 VQYGDSDQNIEVKI------PLNRISANRKYIEQNIYLFI 209 (223)
Q Consensus 176 ~q~g~~~~~i~~ai------P~~~i~~~~~~~~~~~~~~~ 209 (223)
+.+.. ..+...| +-..++-+..|.|.++++..
T Consensus 168 v~~~~--~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~ 205 (392)
T PRK14279 168 LRLTS--PAPCTTCHGSGARPGTSPKVCPTCNGSGVISRN 205 (392)
T ss_pred Eeeec--cccCCCCccccccCCCCCCCCCCCcceEEEEEE
Confidence 88831 1222223 22235667888888877665
No 15
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.88 E-value=8.4e-23 Score=187.62 Aligned_cols=168 Identities=24% Similarity=0.198 Sum_probs=108.5
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCC---
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGT--- 122 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~--- 122 (223)
..|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+++.....+.++
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~ 82 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS 82 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence 4799999999999999999999999999999999873 47789999999999999999999999976432211000
Q ss_pred CCCCCCCCCCCCCCCCCC-Ccccccccc------ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec------
Q 027429 123 NASAGFSRSSWKGPPRPE-ALFVDENAC------IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI------ 189 (223)
Q Consensus 123 ~~~~~~~~~~~~g~~~~~-~~f~~e~~~------igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai------ 189 (223)
+.++++.+..+.++.+.+ .+|...+.. ..-+..++...+.++|+|++.|..+.+.+.. ..+...|
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r--~~~C~~C~G~G~~ 160 (380)
T PRK14297 83 GGFGGFDFSDMGGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTR--NENCETCNGTGAK 160 (380)
T ss_pred CCCCCcCcccccchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeee--eccCCCccccccc
Confidence 011111101001111111 222211000 0012347888999999999999999988831 1122222
Q ss_pred CCCcEEeeecccCCceEeehh-hhhhhhh
Q 027429 190 PLNRISANRKYIEQNIYLFIW-FIRGMVH 217 (223)
Q Consensus 190 P~~~i~~~~~~~~~~~~~~~~-~~~~~~~ 217 (223)
|-..++-+..|.|.+++.... +.+|+++
T Consensus 161 ~~~~~~~C~~C~G~G~~~~~~~~~~G~~~ 189 (380)
T PRK14297 161 PGTSPKTCDKCGGTGQIRVQRNTPLGSFV 189 (380)
T ss_pred CCCcCccCCCccCeEEEEEEEEcCCceeE
Confidence 222255677888888665442 5556554
No 16
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.88 E-value=1.2e-22 Score=187.07 Aligned_cols=169 Identities=24% Similarity=0.237 Sum_probs=113.3
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhccccc--ccCCC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF--HFGTN 123 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~--~~~~~ 123 (223)
..|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+++..... +++.+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 4799999999999999999999999999999999873 3678999999999999999999999997643211 11111
Q ss_pred CCCCCCCC----CC--CCCCCC-CCccccccccc-------cCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEE-e
Q 027429 124 ASAGFSRS----SW--KGPPRP-EALFVDENACI-------GCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEV-K 188 (223)
Q Consensus 124 ~~~~~~~~----~~--~g~~~~-~~~f~~e~~~i-------gc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~-a 188 (223)
.++..++. .+ .+..+. ..+|...+... .-...++...+.++|+|++.|..+.+.+. ..+.+ .
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~---r~~~C~~ 160 (386)
T PRK14277 84 GFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVE---RFEKCDV 160 (386)
T ss_pred CcCCCCccccCccccccchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEE---eeccCCC
Confidence 00000110 01 111111 12232111000 01234788899999999999999999883 22222 2
Q ss_pred c------CCCcEEeeecccCCceEeehh-hhhhhhhhh
Q 027429 189 I------PLNRISANRKYIEQNIYLFIW-FIRGMVHKL 219 (223)
Q Consensus 189 i------P~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~ 219 (223)
| +...+.-+..|.|.++++... +.+||+++.
T Consensus 161 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~ 198 (386)
T PRK14277 161 CKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNI 198 (386)
T ss_pred CCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEE
Confidence 2 222367789999999876554 778888765
No 17
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.88 E-value=1.7e-22 Score=183.89 Aligned_cols=171 Identities=25% Similarity=0.222 Sum_probs=114.6
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhccccccc-C--CCCC
Q 027429 50 NYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHF-G--TNAS 125 (223)
Q Consensus 50 d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~-~--~~~~ 125 (223)
|||+||||+++|+.+|||+|||+++++||||++++ .+.++|++|++||++|+||.+|..||+++.....+. + ++.+
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~ 80 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF 80 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence 79999999999999999999999999999999974 467899999999999999999999999765432110 0 0011
Q ss_pred CCCCCCCCCCCCCCC-Cccccccc------cccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec------CCC
Q 027429 126 AGFSRSSWKGPPRPE-ALFVDENA------CIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI------PLN 192 (223)
Q Consensus 126 ~~~~~~~~~g~~~~~-~~f~~e~~------~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai------P~~ 192 (223)
.+...+.+.++.+.. .+|..... -..-...++...+.++++|++.|..+.+.+.. ..+...| +.-
T Consensus 81 ~~~~~~~~~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r--~~~C~~C~G~G~~~~~ 158 (354)
T TIGR02349 81 NGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPR--KESCETCHGTGAKPGT 158 (354)
T ss_pred CCccccCcCchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeec--CCcCCCCCCCCCCCCC
Confidence 111000121221221 22221100 00012347888999999999999999998841 2222223 112
Q ss_pred cEEeeecccCCceEeehh-hhhhhhhhhccCC
Q 027429 193 RISANRKYIEQNIYLFIW-FIRGMVHKLSGFC 223 (223)
Q Consensus 193 ~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 223 (223)
.+.-+..|.|.++++... +.+||+++ +..|
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C 189 (354)
T TIGR02349 159 DPKTCPTCGGTGQVRRQQGTPFGFFQQ-QQTC 189 (354)
T ss_pred CCccCCCCCCeeEEEEEEeccCCceEE-EEec
Confidence 266788999999877665 77889876 4455
No 18
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.87 E-value=2.9e-22 Score=178.11 Aligned_cols=145 Identities=26% Similarity=0.332 Sum_probs=100.6
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhccccc-ccCCCCC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-HFGTNAS 125 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~-~~~~~~~ 125 (223)
..|||+||||+++|+.+|||+|||+++++||||++++ .++++|++|++||++|+||.+|+.||+++..... ++.++..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~ 82 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence 5799999999999999999999999999999999874 4778999999999999999999999997654211 1111000
Q ss_pred CCCCCCCCCCC--CCCCCcccccccc----------------ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEE
Q 027429 126 AGFSRSSWKGP--PRPEALFVDENAC----------------IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEV 187 (223)
Q Consensus 126 ~~~~~~~~~g~--~~~~~~f~~e~~~----------------igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ 187 (223)
++.+...|.+. .+..++|...+.. ......++...+.++++|++.|..+.+++. ..++++
T Consensus 83 ~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~--g~~~~V 160 (291)
T PRK14299 83 GPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA--GERLSV 160 (291)
T ss_pred CCCCCCCccccCcCCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC--CEEEEE
Confidence 00000111110 1111122111000 011234788899999999999999998884 357899
Q ss_pred ecCCCcE
Q 027429 188 KIPLNRI 194 (223)
Q Consensus 188 aiP~~~i 194 (223)
.||+|..
T Consensus 161 ~Ip~G~~ 167 (291)
T PRK14299 161 RIPPGVR 167 (291)
T ss_pred ecCCCcC
Confidence 9999873
No 19
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.87 E-value=2.4e-22 Score=184.72 Aligned_cols=159 Identities=26% Similarity=0.252 Sum_probs=105.1
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCCCCCC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNASA 126 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~~~~~ 126 (223)
.+|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+++.......+....+
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~ 81 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCcccc
Confidence 3799999999999999999999999999999999974 467899999999999999999999999765322111110000
Q ss_pred CCCCCCCCCCCCCCCcccc-------c--ccc------------ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceE
Q 027429 127 GFSRSSWKGPPRPEALFVD-------E--NAC------------IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNI 185 (223)
Q Consensus 127 ~~~~~~~~g~~~~~~~f~~-------e--~~~------------igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i 185 (223)
..+|+.+.+ .+..++|.+ . +.. ..-..-++...+.++|+|++.|..+.+++.. ..+
T Consensus 82 ~~~~~~~~~-~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r--~~~ 158 (382)
T PRK14291 82 QEGFSDFGG-GNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPR--YVP 158 (382)
T ss_pred ccccccccC-CCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEee--ecc
Confidence 011111110 011111100 0 000 0002347888999999999999999998841 112
Q ss_pred EEec------CCCcEEeeecccCCceEeeh
Q 027429 186 EVKI------PLNRISANRKYIEQNIYLFI 209 (223)
Q Consensus 186 ~~ai------P~~~i~~~~~~~~~~~~~~~ 209 (223)
...| +...+.-+..|.|.+++...
T Consensus 159 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~ 188 (382)
T PRK14291 159 CEACGGTGYDPGSGEKVCPTCGGSGEIYQR 188 (382)
T ss_pred CCCCccccCCCCCCCccCCCCCCceEEEEe
Confidence 2222 22235667888888877665
No 20
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.87 E-value=2.8e-22 Score=184.08 Aligned_cols=164 Identities=23% Similarity=0.236 Sum_probs=108.7
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCCCCCCC
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNASAG 127 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~-a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~~~~~~ 127 (223)
+|||+||||+++|+.+|||+|||+|+++||||++++. ++++|++|++||++|+||.+|+.||+++.....+.+. .++
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~--~~g 80 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGG--GGG 80 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCC--CCC
Confidence 6999999999999999999999999999999999743 6789999999999999999999999876432111000 001
Q ss_pred CCCCCCCCCCCCC-Ccccccccc-----ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec------CCCcEE
Q 027429 128 FSRSSWKGPPRPE-ALFVDENAC-----IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI------PLNRIS 195 (223)
Q Consensus 128 ~~~~~~~g~~~~~-~~f~~e~~~-----igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai------P~~~i~ 195 (223)
++ ..+.+..+.+ .+|.....- ..-...++...+.++|+|++.|+.+.+.+.. ..+...| +...+.
T Consensus 81 ~~-~~f~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~--~~~C~~C~G~G~~~~~~~~ 157 (378)
T PRK14278 81 FG-GGFGGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDT--AVLCDRCHGKGTAGDSKPV 157 (378)
T ss_pred CC-cCcCchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEe--eccCCCCcCccCCCCCCce
Confidence 11 0111111111 223211000 0012347888999999999999999998831 1122222 222366
Q ss_pred eeecccCCceEeehh-hhhhhhh
Q 027429 196 ANRKYIEQNIYLFIW-FIRGMVH 217 (223)
Q Consensus 196 ~~~~~~~~~~~~~~~-~~~~~~~ 217 (223)
-+..|.|.+.+.... ...|+++
T Consensus 158 ~C~~C~G~G~~~~~~~~~~g~~~ 180 (378)
T PRK14278 158 TCDTCGGRGEVQTVQRSFLGQVM 180 (378)
T ss_pred ecCCccCceEEEEEEeccceeEE
Confidence 788888888765543 5556664
No 21
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.87 E-value=5.2e-22 Score=181.80 Aligned_cols=165 Identities=25% Similarity=0.283 Sum_probs=110.1
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCC-CC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGT-NA 124 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~-~~ 124 (223)
..|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|..||+++.......+. +.
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~ 82 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG 82 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCCC
Confidence 5799999999999999999999999999999999873 36789999999999999999999999876432211110 01
Q ss_pred CCCCCCCCCCCCCCCCCcccccccc-------ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEE-ec------C
Q 027429 125 SAGFSRSSWKGPPRPEALFVDENAC-------IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEV-KI------P 190 (223)
Q Consensus 125 ~~~~~~~~~~g~~~~~~~f~~e~~~-------igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~-ai------P 190 (223)
+++ ++.|.+. ..++|...+.. ..-+..++...+.++|+|++.|..+.+.+. ..+.+ .| +
T Consensus 83 ~~~--~~~~~~~--f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~---r~~~C~~C~G~G~~~ 155 (371)
T PRK10767 83 FGG--GGGFGDI--FGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIP---TLVTCDTCHGSGAKP 155 (371)
T ss_pred CCC--ccccccc--hhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeee---ecccCCCCCCcccCC
Confidence 111 1111110 11222211110 001234788899999999999999998884 22222 22 1
Q ss_pred CCcEEeeecccCCceEeehhhhhhhhhhhccCC
Q 027429 191 LNRISANRKYIEQNIYLFIWFIRGMVHKLSGFC 223 (223)
Q Consensus 191 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (223)
...+.-+..|.|.++++... ||++ ++..|
T Consensus 156 ~~~~~~C~~C~G~G~~~~~~---g~~~-~~~~C 184 (371)
T PRK10767 156 GTSPKTCPTCHGAGQVRMQQ---GFFT-VQQTC 184 (371)
T ss_pred CCCCccCCCCCCeeEEEEee---ceEE-EEEeC
Confidence 11245688899998776653 7764 44444
No 22
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.87 E-value=4e-22 Score=182.31 Aligned_cols=168 Identities=23% Similarity=0.212 Sum_probs=109.9
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCCCC
Q 027429 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNA 124 (223)
Q Consensus 47 ~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~~~ 124 (223)
..+|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+++.....+ +.
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~---~~ 78 (366)
T PRK14294 2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSG---TG 78 (366)
T ss_pred CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccC---CC
Confidence 35799999999999999999999999999999999974 36789999999999999999999999986532211 01
Q ss_pred CCC-CCCCC-CCCCCCC-CCccc-cccc-c----ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec------
Q 027429 125 SAG-FSRSS-WKGPPRP-EALFV-DENA-C----IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI------ 189 (223)
Q Consensus 125 ~~~-~~~~~-~~g~~~~-~~~f~-~e~~-~----igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai------ 189 (223)
+++ .++.. +....+. ..+|. .... - ..-...++...+.++|+|++.|..+.+++.. ..+...|
T Consensus 79 ~~~~~~~~~~~~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r--~~~C~~C~G~G~~ 156 (366)
T PRK14294 79 FSGFSGFDDIFSSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQK--LETCEECHGSGCE 156 (366)
T ss_pred CCCcCccccchhhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeee--cccCCCCCCcccc
Confidence 111 11110 1111111 11222 0000 0 0012347888999999999999999988831 1111122
Q ss_pred CCCcEEeeecccCCceEeehhhhhhhhhhhccCC
Q 027429 190 PLNRISANRKYIEQNIYLFIWFIRGMVHKLSGFC 223 (223)
Q Consensus 190 P~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (223)
+...+.-+..|.|.++++.. .||++ ++..|
T Consensus 157 ~~~~~~~C~~C~G~G~~~~~---~G~~~-~~~~C 186 (366)
T PRK14294 157 PGTSPTTCPQCGGSGQVTQS---QGFFS-IRTTC 186 (366)
T ss_pred CCCCcccCCCcCCeEEEEEE---eeeEE-EEeeC
Confidence 11125567888888877654 27763 55554
No 23
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.86 E-value=9.3e-22 Score=181.34 Aligned_cols=167 Identities=23% Similarity=0.271 Sum_probs=110.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhcccc-cccCCCCC
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMR-FHFGTNAS 125 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~-~~~~~~~~ 125 (223)
.|||+||||+++|+.+|||+|||+|+++||||++++ .++++|++|++||++|+||.+|+.||+++.... .+.+. +
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~--~ 78 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGG--F 78 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCC--c
Confidence 489999999999999999999999999999999974 377899999999999999999999999764321 11000 0
Q ss_pred CCCCCCC-----------CCC----CCCCC-Ccccccc---ccc-----cCCcceeeeeeeEeeecccCceEEEeeeCCC
Q 027429 126 AGFSRSS-----------WKG----PPRPE-ALFVDEN---ACI-----GCRECVHHASNTFVMDEATGCARVKVQYGDS 181 (223)
Q Consensus 126 ~~~~~~~-----------~~g----~~~~~-~~f~~e~---~~i-----gc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~ 181 (223)
++.++.. +.+ ..+.+ .+|.... ... .-...++...+.++|+|++.|..+.+++..
T Consensus 79 ~~~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r- 157 (391)
T PRK14284 79 GGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSG- 157 (391)
T ss_pred CCCCcCcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEee-
Confidence 0011110 110 01111 1222100 000 012347888999999999999999998841
Q ss_pred CceEEEec------CCCcEEeeecccCCceEeehhhhhhhhhhhccCC
Q 027429 182 DQNIEVKI------PLNRISANRKYIEQNIYLFIWFIRGMVHKLSGFC 223 (223)
Q Consensus 182 ~~~i~~ai------P~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (223)
......| +...++-+..|.|.+++.... ||++ ++..|
T Consensus 158 -~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~---G~~~-~~~~C 200 (391)
T PRK14284 158 -YKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSR---GFFS-MASTC 200 (391)
T ss_pred -eccCCCCcccccCCCCCCeecCccCCeeEEEEEe---ceEE-EEEEC
Confidence 1122222 233467788999998877552 6654 44444
No 24
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.86 E-value=1.2e-21 Score=179.84 Aligned_cols=168 Identities=23% Similarity=0.289 Sum_probs=110.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCC-CC
Q 027429 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGT-NA 124 (223)
Q Consensus 47 ~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~-~~ 124 (223)
..+|||+||||+++|+.+|||+|||+|+++||||++++ .++++|++|++||++|+||.+|+.||+++.....+++. +.
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~~~ 82 (378)
T PRK14283 3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQEDI 82 (378)
T ss_pred CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccccccccc
Confidence 46899999999999999999999999999999999873 57889999999999999999999999976433211110 00
Q ss_pred CCCCC----CCCCC-CCCCCCCc--cccccccccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEE-ec------C
Q 027429 125 SAGFS----RSSWK-GPPRPEAL--FVDENACIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEV-KI------P 190 (223)
Q Consensus 125 ~~~~~----~~~~~-g~~~~~~~--f~~e~~~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~-ai------P 190 (223)
+.+.. +..+. ++.+.... |.....-...+..++...+.++|+|++.|..+.+.+. ..+.+ .| +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~---r~~~C~~C~G~G~~~ 159 (378)
T PRK14283 83 FNNINFEDIFQGFGFGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVR---HTKKCPVCNGSRAEP 159 (378)
T ss_pred ccccCccccccccccchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEee---eeccCCCCCccccCC
Confidence 10000 11111 00111111 1100000012334788899999999999999988874 22222 12 1
Q ss_pred CCcEEeeecccCCceEeehh-hhhhhhh
Q 027429 191 LNRISANRKYIEQNIYLFIW-FIRGMVH 217 (223)
Q Consensus 191 ~~~i~~~~~~~~~~~~~~~~-~~~~~~~ 217 (223)
...+.-+..|.|.+++.... +..||+.
T Consensus 160 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~ 187 (378)
T PRK14283 160 GSEVKTCPTCGGTGQVKQVRNTILGQMM 187 (378)
T ss_pred CCCCccCCCcCCccEEEEEEeccCceEE
Confidence 12356678888888776543 5567664
No 25
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.85 E-value=1.1e-21 Score=179.87 Aligned_cols=161 Identities=24% Similarity=0.207 Sum_probs=106.4
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCCCCC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNAS 125 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~~~~ 125 (223)
..|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+++.....+.+ .+
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~--~~ 80 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNG--GF 80 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCC--CC
Confidence 4799999999999999999999999999999999874 3678999999999999999999999997653221111 01
Q ss_pred CCCCCCCCCCCC-CCCCccccccc--c-------ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec------
Q 027429 126 AGFSRSSWKGPP-RPEALFVDENA--C-------IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI------ 189 (223)
Q Consensus 126 ~~~~~~~~~g~~-~~~~~f~~e~~--~-------igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai------ 189 (223)
+ +|..+.+.. ...++|...+. - ..-...++...+.++|+|++.|..+.+.+.. ......|
T Consensus 81 ~--g~~~~~~~~~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r--~~~C~~C~G~G~~ 156 (373)
T PRK14301 81 G--GFSSAEDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPK--NVTCDDCGGSGAA 156 (373)
T ss_pred C--CcccccccccchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeee--cccCCCCCCcccC
Confidence 1 111111110 01122221110 0 0012347888999999999999999988731 1111122
Q ss_pred CCCcEEeeecccCCceEeehhhhhhhhh
Q 027429 190 PLNRISANRKYIEQNIYLFIWFIRGMVH 217 (223)
Q Consensus 190 P~~~i~~~~~~~~~~~~~~~~~~~~~~~ 217 (223)
+...+.-+..|.|.+++... .||++
T Consensus 157 ~~~~~~~C~~C~G~G~v~~~---~G~~~ 181 (373)
T PRK14301 157 PGTSPETCRHCGGSGQVRQS---QGFFQ 181 (373)
T ss_pred CCCCCcccCCccCeeEEEEE---eeeEE
Confidence 11225567888888877654 26653
No 26
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.85 E-value=2.5e-21 Score=177.01 Aligned_cols=164 Identities=20% Similarity=0.232 Sum_probs=108.0
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---chhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCCCCC
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ---KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNAS 125 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~---~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~~~~ 125 (223)
.|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|..||+++.....+ +++.+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~-~~~~~ 81 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGA-GGSNF 81 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccccc-CCCCc
Confidence 699999999999999999999999999999999874 36789999999999999999999999976432111 10011
Q ss_pred CCCCCCCCCCCCCCC-Cccccccc----------ccc-CCcceeeeeeeEeeecccCceEEEeeeCCCCceEEE-ec---
Q 027429 126 AGFSRSSWKGPPRPE-ALFVDENA----------CIG-CRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEV-KI--- 189 (223)
Q Consensus 126 ~~~~~~~~~g~~~~~-~~f~~e~~----------~ig-c~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~-ai--- 189 (223)
+..++..+.++.+.+ .+|...+. -.. -...++...+.++|+|++.|..+.+.+. ..+.+ .|
T Consensus 82 ~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~---r~~~C~~C~G~ 158 (365)
T PRK14290 82 NWDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYR---RNAMCPDCSGT 158 (365)
T ss_pred cccccccccchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEee---ecccCCCCccc
Confidence 101111111111111 12211000 000 0134788899999999999999998873 12222 22
Q ss_pred --CCCcEEeeecccCCceEeehhhhhhhhh
Q 027429 190 --PLNRISANRKYIEQNIYLFIWFIRGMVH 217 (223)
Q Consensus 190 --P~~~i~~~~~~~~~~~~~~~~~~~~~~~ 217 (223)
..+...-+..|.|.+++.... .+||+.
T Consensus 159 g~~~~~~~~C~~C~G~G~~~~~~-~~g~~~ 187 (365)
T PRK14290 159 GAKNGKLITCPTCHGTGQQRIVR-GQGFFR 187 (365)
T ss_pred cCCCCCCccCCCCCCcCEEEEEe-ccCeEE
Confidence 122355688889988776663 567653
No 27
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.85 E-value=6.1e-21 Score=175.82 Aligned_cols=160 Identities=26% Similarity=0.257 Sum_probs=103.0
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhh----hhcccccc-c
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDA----SIGQMRFH-F 120 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~----~~~~~~~~-~ 120 (223)
..|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+ ++.....+ .
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~~ 87 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPGP 87 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccCC
Confidence 4799999999999999999999999999999999873 377899999999999999999999998 43221110 0
Q ss_pred CCCCCCCCCC---CCCC---------CC-CCCCCccccccc-----cccCCcceeeeeeeEeeecccCceEEEeeeCCCC
Q 027429 121 GTNASAGFSR---SSWK---------GP-PRPEALFVDENA-----CIGCRECVHHASNTFVMDEATGCARVKVQYGDSD 182 (223)
Q Consensus 121 ~~~~~~~~~~---~~~~---------g~-~~~~~~f~~e~~-----~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~ 182 (223)
+.+..+++.+ .-|. +. ....++|...+. -..-...++...+.++|+|++.|..+.+.+..
T Consensus 88 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~r-- 165 (389)
T PRK14295 88 GGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTS-- 165 (389)
T ss_pred CCCCCCCCCcccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEeec--
Confidence 0000000000 0000 00 001122211110 00112347888999999999999999988841
Q ss_pred ceEEEec------CCCcEEeeecccCCceEeeh
Q 027429 183 QNIEVKI------PLNRISANRKYIEQNIYLFI 209 (223)
Q Consensus 183 ~~i~~ai------P~~~i~~~~~~~~~~~~~~~ 209 (223)
..+...| +-..+.-+..|.|.++++..
T Consensus 166 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~ 198 (389)
T PRK14295 166 QAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRN 198 (389)
T ss_pred cccCCCCcccccCCCCCCcCCCCCCCEeEEEEE
Confidence 1222222 11225567788888877765
No 28
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=4e-21 Score=177.43 Aligned_cols=166 Identities=23% Similarity=0.254 Sum_probs=108.5
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhccccccc---CC-
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHF---GT- 122 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~---~~- 122 (223)
.|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+++.....+. +.
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~~ 82 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGG 82 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCCC
Confidence 699999999999999999999999999999999874 367899999999999999999999999764322110 00
Q ss_pred CCCCCCCCCCCCCCCC-CCCccccc--------------cccc--------cCCcceeeeeeeEeeecccCceEEEeeeC
Q 027429 123 NASAGFSRSSWKGPPR-PEALFVDE--------------NACI--------GCRECVHHASNTFVMDEATGCARVKVQYG 179 (223)
Q Consensus 123 ~~~~~~~~~~~~g~~~-~~~~f~~e--------------~~~i--------gc~~c~~~a~~t~~~ee~~~g~~~~~q~g 179 (223)
+.+++ +...|..... ...+|... +... .-...++...+.++|+|++.|..+.+++.
T Consensus 83 ~~~~~-~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~ 161 (397)
T PRK14281 83 PGYGG-GGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIK 161 (397)
T ss_pred CCCCc-CCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEEE
Confidence 00100 0001111000 00122110 0000 01234788899999999999999998883
Q ss_pred CCCceEEE-ec-----CCCcEEeeecccCCceEeehh-hhhhhhhh
Q 027429 180 DSDQNIEV-KI-----PLNRISANRKYIEQNIYLFIW-FIRGMVHK 218 (223)
Q Consensus 180 ~~~~~i~~-ai-----P~~~i~~~~~~~~~~~~~~~~-~~~~~~~~ 218 (223)
..+.+ .| -.+.+.-+..|.|.+.+.... ++.|+++.
T Consensus 162 ---r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~ 204 (397)
T PRK14281 162 ---KQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVN 204 (397)
T ss_pred ---eeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEE
Confidence 22222 22 123566788888888765543 55566643
No 29
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=1.2e-20 Score=173.63 Aligned_cols=166 Identities=24% Similarity=0.201 Sum_probs=109.1
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhccccccc-CCCC
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHF-GTNA 124 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~-~~~~ 124 (223)
..|||+||||+++|+.+|||+|||+|+++||||+++. .++++|++|++||++|+||.+|+.||+++.....+. +.+.
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGG 83 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCCC
Confidence 5799999999999999999999999999999999873 477899999999999999999999999764321110 1111
Q ss_pred CCCCCCCCCCCCCC-CCCcccccc---------c-----cccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEe-
Q 027429 125 SAGFSRSSWKGPPR-PEALFVDEN---------A-----CIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVK- 188 (223)
Q Consensus 125 ~~~~~~~~~~g~~~-~~~~f~~e~---------~-----~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~a- 188 (223)
+.+.++ .+..... ...+|...+ . -..-+..++...+.++|+|++.|..+.+++. ..+.+.
T Consensus 84 ~~~~~~-~~~~~f~~f~~~fg~~~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~---r~~~C~~ 159 (386)
T PRK14289 84 FSGEGM-SMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVK---KYVPCSH 159 (386)
T ss_pred CCCCCc-ChhhhhHHhhhhhcccccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEE---eecccCC
Confidence 111010 0000000 000111000 0 0011234788889999999999999999883 222222
Q ss_pred c------CCCcEEeeecccCCceEeehh-hhhhhhh
Q 027429 189 I------PLNRISANRKYIEQNIYLFIW-FIRGMVH 217 (223)
Q Consensus 189 i------P~~~i~~~~~~~~~~~~~~~~-~~~~~~~ 217 (223)
| ....+.-+..|.|.+.+.... +.+|+++
T Consensus 160 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~ 195 (386)
T PRK14289 160 CHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQ 195 (386)
T ss_pred CCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEE
Confidence 2 122356678888888776654 5667774
No 30
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=1.1e-20 Score=172.97 Aligned_cols=164 Identities=27% Similarity=0.266 Sum_probs=108.6
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhccccccc-CCCCCC
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHF-GTNASA 126 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~-~~~~~~ 126 (223)
.|||+||||+++|+.+|||+|||+|+++||||++++ .+.++|++|++||++|+||.+|+.||.++.....+. +++.++
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~~ 81 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFG 81 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCcccC
Confidence 699999999999999999999999999999999974 367899999999999999999999999764321111 000111
Q ss_pred CCCCCCCCCCCCCC-Ccccccc--cc----ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec-------CCC
Q 027429 127 GFSRSSWKGPPRPE-ALFVDEN--AC----IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI-------PLN 192 (223)
Q Consensus 127 ~~~~~~~~g~~~~~-~~f~~e~--~~----igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai-------P~~ 192 (223)
+.++ ++.+.+ .+|.... .. ..-...++...+.++|+|++.|..+.+++.. ......| +..
T Consensus 82 ~~~~----d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r--~~~C~~C~G~G~~~~~~ 155 (371)
T PRK14292 82 GMGF----DPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDR--LTECEHCHGSRTEPGGK 155 (371)
T ss_pred ccCC----ChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEe--eecCCCCcccccCCCCC
Confidence 1111 111111 1222100 00 0012347888999999999999999888731 1111122 112
Q ss_pred cEEeeecccCCceEeeh-hhhhhhhhh
Q 027429 193 RISANRKYIEQNIYLFI-WFIRGMVHK 218 (223)
Q Consensus 193 ~i~~~~~~~~~~~~~~~-~~~~~~~~~ 218 (223)
++.-+..|.|.+.+... +.+.|||+.
T Consensus 156 ~~~~C~~C~G~G~~~~~~~~~~g~~~~ 182 (371)
T PRK14292 156 PPKTCPTCRGAGAVRAQARTIFGVVET 182 (371)
T ss_pred CCccCCCCCCccEEEEEEeccCceEEE
Confidence 36677888888876643 356688864
No 31
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=2.5e-20 Score=170.95 Aligned_cols=164 Identities=21% Similarity=0.195 Sum_probs=108.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhcccccccCCCCCCC
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHFGTNASAG 127 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~~~~~~~~ 127 (223)
.|||+||||+++|+.+|||+|||+++++||||++++ .++++|++|++||++|+||.+|+.||.++.....+ +. .+.+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~-~~-~~~~ 80 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSG-AA-GFPD 80 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhcccccccc-CC-CcCC
Confidence 699999999999999999999999999999999874 47789999999999999999999999876432111 00 0000
Q ss_pred CCCCCCCCCCCC-CCcccccccc----------ccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEec------C
Q 027429 128 FSRSSWKGPPRP-EALFVDENAC----------IGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKI------P 190 (223)
Q Consensus 128 ~~~~~~~g~~~~-~~~f~~e~~~----------igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~ai------P 190 (223)
+....+..+. ..+|...... ..-...++...+.++|+|++.|..+.+++.. ..+...| +
T Consensus 81 --~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r--~~~C~~C~G~G~~~ 156 (374)
T PRK14293 81 --MGDMGGFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPH--LETCETCRGSGAKP 156 (374)
T ss_pred --cccccchHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeec--cccCCCCCCcCCCC
Confidence 0000111111 1122110000 0012236778889999999999999888841 1122222 1
Q ss_pred CCcEEeeecccCCceEeehh-hhhhhhhh
Q 027429 191 LNRISANRKYIEQNIYLFIW-FIRGMVHK 218 (223)
Q Consensus 191 ~~~i~~~~~~~~~~~~~~~~-~~~~~~~~ 218 (223)
...++-+..|.|.+++.... +.+||+++
T Consensus 157 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~~ 185 (374)
T PRK14293 157 GTGPTTCSTCGGAGQVRRATRTPFGSFTQ 185 (374)
T ss_pred CCCCeeCCCCCCcceEEEEEecCcceEEE
Confidence 12256678888888776543 56677764
No 32
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=2.8e-20 Score=170.57 Aligned_cols=166 Identities=20% Similarity=0.256 Sum_probs=109.4
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhccccccc-CCCCCC
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRFHF-GTNASA 126 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~~~-~~~~~~ 126 (223)
+|||+||||+++|+.+|||+|||+++++||||+++. .++++|++|++||++|+|+.+|..||+++.....+. +.+..+
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~g 82 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGG 82 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCCC
Confidence 699999999999999999999999999999999864 467899999999999999999999999764321110 000000
Q ss_pred C-CCCCCCCCCCC-CCCcccccccc-------cc-CCcceeeeeeeEeeecccCceEEEeeeCCCCceEEEecCCC----
Q 027429 127 G-FSRSSWKGPPR-PEALFVDENAC-------IG-CRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEVKIPLN---- 192 (223)
Q Consensus 127 ~-~~~~~~~g~~~-~~~~f~~e~~~-------ig-c~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~aiP~~---- 192 (223)
+ .++. .+..+ ...+|...+.- .+ -+..++...+.++|+|++.|..+.+.+. ..+.+....|
T Consensus 83 ~~~~~~--~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~---r~~~C~~C~G~g~~ 157 (372)
T PRK14300 83 NHGGFH--PDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFS---SEVKCDTCHGSGSE 157 (372)
T ss_pred CCCccc--cchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEee---eccccCCCCCcccC
Confidence 0 0111 00101 11222211000 00 1234788899999999999999998883 2233322111
Q ss_pred ---cEEeeecccCCceEeehhhhhhhhhhhccCC
Q 027429 193 ---RISANRKYIEQNIYLFIWFIRGMVHKLSGFC 223 (223)
Q Consensus 193 ---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (223)
.+.-++.|.|.+.+.+. .||++ ++..|
T Consensus 158 ~~~~~~~C~~C~G~G~~~~~---~g~~~-~~~~C 187 (372)
T PRK14300 158 KGETVTTCDACSGVGATRMQ---QGFFT-IEQAC 187 (372)
T ss_pred CCCCCccCCCccCeEEEEEe---eceEE-EEEeC
Confidence 26678889999887764 37765 44444
No 33
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.82 E-value=1.1e-19 Score=162.49 Aligned_cols=143 Identities=23% Similarity=0.375 Sum_probs=96.3
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhccccc-ccCCC-C
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF-HFGTN-A 124 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~-~~~~~-~ 124 (223)
..|||+||||+++|+.+|||+|||+|+++||||++++ .++++|++|++||++|+||.+|..||..+..... +++.. .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~ 82 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQ 82 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccccccc
Confidence 4799999999999999999999999999999999864 4778999999999999999999999987532111 12110 0
Q ss_pred CCCCCCCCCCCCCCCCCcccccccc--------ccCCcceeeeeeeEeeecccCceEEEeeeC------CC------Cce
Q 027429 125 SAGFSRSSWKGPPRPEALFVDENAC--------IGCRECVHHASNTFVMDEATGCARVKVQYG------DS------DQN 184 (223)
Q Consensus 125 ~~~~~~~~~~g~~~~~~~f~~e~~~--------igc~~c~~~a~~t~~~ee~~~g~~~~~q~g------~~------~~~ 184 (223)
+++ + ..+. ..+..++|...+.. ..-...++...+.++++|++.|..+.+.+. .+ ...
T Consensus 83 ~~~-~-~~~~-~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~ 159 (306)
T PRK10266 83 HGD-G-QSFN-AEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKT 159 (306)
T ss_pred cCC-C-CCCC-CCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEE
Confidence 000 0 0011 11111222110000 001234788899999999999987766541 11 136
Q ss_pred EEEecCCCc
Q 027429 185 IEVKIPLNR 193 (223)
Q Consensus 185 i~~aiP~~~ 193 (223)
+++.||.|.
T Consensus 160 ~~V~Ip~G~ 168 (306)
T PRK10266 160 LNVKIPAGV 168 (306)
T ss_pred EEEEECCCC
Confidence 778888886
No 34
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=8.1e-19 Score=161.11 Aligned_cols=74 Identities=39% Similarity=0.589 Sum_probs=67.2
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---chhHHHHHHHHHHHHhhcccchhhhhhhhccccc
Q 027429 45 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ---KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQMRF 118 (223)
Q Consensus 45 ~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~---~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~~~ 118 (223)
+...++||+||||..+|+..+||++||+||++||||++++ ++.+.|+.|+.||+|||||+.|.+||.+..++..
T Consensus 4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~ 80 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILR 80 (508)
T ss_pred chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhc
Confidence 3457899999999999999999999999999999999884 4788999999999999999999999998876543
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=2.9e-18 Score=152.29 Aligned_cols=73 Identities=40% Similarity=0.636 Sum_probs=66.1
Q ss_pred CCCCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhcc
Q 027429 43 ERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQ 115 (223)
Q Consensus 43 ~~~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~ 115 (223)
+......|||+||||+++|+..|||+||++|+|+||||.+.. .+.++|++|.+|||+|+|+++|..||..+..
T Consensus 37 s~~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~ 110 (288)
T KOG0715|consen 37 SRIISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLE 110 (288)
T ss_pred cccCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhh
Confidence 444555699999999999999999999999999999999885 5789999999999999999999999998754
No 36
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=3.4e-18 Score=148.25 Aligned_cols=69 Identities=36% Similarity=0.553 Sum_probs=64.3
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hhHHHHHHHHHHHHhhcccchhhhhhhhcc
Q 027429 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQ 115 (223)
Q Consensus 47 ~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~--a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~ 115 (223)
...++|+||||+++|+.++|||+||+|+++||||++++. +.++|++||+||+||+||.+|..||..+..
T Consensus 29 ~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~ 99 (279)
T KOG0716|consen 29 IRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGEL 99 (279)
T ss_pred chhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhH
Confidence 367899999999999999999999999999999999864 789999999999999999999999998643
No 37
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.74 E-value=3.1e-18 Score=118.81 Aligned_cols=61 Identities=44% Similarity=0.773 Sum_probs=57.1
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-c--hhHHHHHHHHHHHHhhcccchhhhh
Q 027429 50 NYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-K--GHEHTLLLNEAYKVLMRGDLRKDYD 110 (223)
Q Consensus 50 d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~--a~~~f~~I~eAY~iL~dp~~R~~YD 110 (223)
|||+||||+++++.++||++|+++++++|||+++. . +.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 68999999999999999999999999999999764 3 5689999999999999999999998
No 38
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.67 E-value=7e-17 Score=143.34 Aligned_cols=69 Identities=41% Similarity=0.596 Sum_probs=64.3
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hhHHHHHHHHHHHHhhcccchhhhhhhhccc
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK--GHEHTLLLNEAYKVLMRGDLRKDYDASIGQM 116 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~--a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~ 116 (223)
..|||+||||+++++.+||++|||..+++||||||+++ |.+.|+.|.+||++|+|+..|..||..+...
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~ 74 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSG 74 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhc
Confidence 58999999999999999999999999999999999843 8899999999999999999999999987543
No 39
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.64 E-value=2.3e-16 Score=155.79 Aligned_cols=71 Identities=32% Similarity=0.452 Sum_probs=64.6
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhcc
Q 027429 45 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQ 115 (223)
Q Consensus 45 ~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~ 115 (223)
....++||+||||+++|+..+||+|||+||++||||+++. .+.++|+.|++||++|+||.+|+.||.++..
T Consensus 569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~ 640 (1136)
T PTZ00341 569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYD 640 (1136)
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhcccc
Confidence 4456899999999999999999999999999999999874 4678999999999999999999999987543
No 40
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.64 E-value=3.4e-16 Score=106.85 Aligned_cols=57 Identities=47% Similarity=0.707 Sum_probs=52.2
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---chhHHHHHHHHHHHHhhcccc
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ---KGHEHTLLLNEAYKVLMRGDL 105 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~---~a~~~f~~I~eAY~iL~dp~~ 105 (223)
++||+||||+++++.++||++|+++++++|||+++. .+.+.|.+|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999999999873 367899999999999999853
No 41
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=2.1e-16 Score=145.49 Aligned_cols=71 Identities=32% Similarity=0.465 Sum_probs=64.2
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----chhHHHHHHHHHHHHhhcccchhhhhhhhccc
Q 027429 46 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-----KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQM 116 (223)
Q Consensus 46 ~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-----~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~ 116 (223)
..+.+||.+|||+++|+.+|||+|||++++.|||||..+ .|++.|+.|.+|||+|+||++|..||..+.++
T Consensus 6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qG 81 (546)
T KOG0718|consen 6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQG 81 (546)
T ss_pred cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcc
Confidence 445699999999999999999999999999999999763 26789999999999999999999999987554
No 42
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.63 E-value=4.6e-16 Score=104.30 Aligned_cols=53 Identities=49% Similarity=0.806 Sum_probs=49.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhc
Q 027429 50 NYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMR 102 (223)
Q Consensus 50 d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~d 102 (223)
|||+||||+++++.++||++|+++++++|||+++. .+.+.|.+|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 69999999999999999999999999999999875 477899999999999986
No 43
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=4e-16 Score=132.89 Aligned_cols=67 Identities=37% Similarity=0.605 Sum_probs=61.7
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----chhHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ----KGHEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~----~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
.+|+|+||||.++|+..+|++||+++++++|||++++ ++.+.|++|+.||.||+|.++|+.||..+.
T Consensus 13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~ 83 (264)
T KOG0719|consen 13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGS 83 (264)
T ss_pred ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCC
Confidence 4599999999999999999999999999999999963 367899999999999999999999998753
No 44
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=3.3e-15 Score=123.60 Aligned_cols=66 Identities=44% Similarity=0.667 Sum_probs=61.7
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hhHHHHHHHHHHHHhhcccchhhhhhh
Q 027429 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---GHEHTLLLNEAYKVLMRGDLRKDYDAS 112 (223)
Q Consensus 47 ~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~---a~~~f~~I~eAY~iL~dp~~R~~YD~~ 112 (223)
...+||+||||+++|+..|||++||++++++|||+++.. +.+.|+.|++||++|+|+.+|..||..
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 457999999999999999999999999999999999854 568999999999999999999999985
No 45
>PHA03102 Small T antigen; Reviewed
Probab=99.56 E-value=2.2e-15 Score=122.18 Aligned_cols=66 Identities=26% Similarity=0.300 Sum_probs=60.3
Q ss_pred cCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhcccchhhhhhhhccc
Q 027429 49 KNYYELLGVSVEA--NGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDASIGQM 116 (223)
Q Consensus 49 ~d~Y~iLgv~~~a--s~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~~ 116 (223)
+.+|+||||+++| |.++||+|||++++++|||++++ .++|++||+||++|+|+.+|..||..+...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~--~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~ 72 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD--EEKMKELNTLYKKFRESVKSLRDLDGEEDS 72 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch--hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence 5689999999999 99999999999999999999754 579999999999999999999999876443
No 46
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=4.9e-15 Score=125.03 Aligned_cols=72 Identities=33% Similarity=0.516 Sum_probs=64.3
Q ss_pred CCCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chhHHHHHHHHHHHHhhcccchhhhhhhhcc
Q 027429 44 RASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ--KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQ 115 (223)
Q Consensus 44 ~~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~--~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~ 115 (223)
+.....|+||||||+++++..|||+|||+|++++||||+++ ..++.+..|++||+.|+|+..|+.|...+..
T Consensus 94 ~~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~P 167 (230)
T KOG0721|consen 94 RERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNP 167 (230)
T ss_pred HHhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCC
Confidence 45556899999999999999999999999999999999875 3567789999999999999999999987543
No 47
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.55 E-value=6.1e-15 Score=132.56 Aligned_cols=70 Identities=36% Similarity=0.591 Sum_probs=63.4
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-----hhHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 45 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-----GHEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 45 ~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~-----a~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
.+..+|||+||||.++|+..||-+|||+++.+||||-..++ ++++|.-|-.|-++|+||++|+.||+...
T Consensus 390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeD 464 (504)
T KOG0624|consen 390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGED 464 (504)
T ss_pred HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCC
Confidence 35579999999999999999999999999999999987633 67889999999999999999999998754
No 48
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.53 E-value=6e-15 Score=143.14 Aligned_cols=66 Identities=42% Similarity=0.630 Sum_probs=61.3
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
.|||+||||+++|+.++||++||+|++++|||+++. .+.++|++|++||++|+||.+|..||.++.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~ 68 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGH 68 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcc
Confidence 699999999999999999999999999999999874 456789999999999999999999998754
No 49
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.50 E-value=4.1e-14 Score=117.01 Aligned_cols=66 Identities=26% Similarity=0.513 Sum_probs=57.8
Q ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCc-------hhHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 49 KNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQK-------GHEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 49 ~d~Y~iLgv~~~--as~~eIK~ayr~l~~~~HPDk~~~~-------a~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
.|||+||||++. ++..+||++||++++++|||+.... +.+.+..||+||++|+||.+|..|+..+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~ 75 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLH 75 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhc
Confidence 489999999996 6889999999999999999996532 34578899999999999999999997654
No 50
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.48 E-value=5e-14 Score=115.98 Aligned_cols=66 Identities=32% Similarity=0.445 Sum_probs=57.9
Q ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----hHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 49 KNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQKG-----HEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 49 ~d~Y~iLgv~~~--as~~eIK~ayr~l~~~~HPDk~~~~a-----~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
.|||+||||++. ++..+|+++||++++++|||++.... .+.+..||+||++|+||.+|..|+..+.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~ 74 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ 74 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence 689999999997 78999999999999999999986432 2346799999999999999999997764
No 51
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.45 E-value=1.7e-13 Score=113.54 Aligned_cols=69 Identities=23% Similarity=0.355 Sum_probs=60.4
Q ss_pred CCccCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCc-------hhHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 46 SKKKNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQK-------GHEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 46 ~~~~d~Y~iLgv~~~--as~~eIK~ayr~l~~~~HPDk~~~~-------a~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
+...+||++|||++. .+..+|+++||++++++|||++... +.+.+..||+||++|+||.+|..|+..+.
T Consensus 1 ~~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~ 78 (173)
T PRK00294 1 MGTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALS 78 (173)
T ss_pred CCCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 356899999999998 6789999999999999999997532 34578999999999999999999998764
No 52
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.44 E-value=2.3e-13 Score=113.03 Aligned_cols=67 Identities=25% Similarity=0.395 Sum_probs=57.7
Q ss_pred ccCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCC--ch-----hHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 48 KKNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQ--KG-----HEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 48 ~~d~Y~iLgv~~~--as~~eIK~ayr~l~~~~HPDk~~~--~a-----~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
..|||+||||++. ++..+|+++||++++++|||++.. .. .+.+..||+||++|+||.+|..|+..+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~ 80 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLR 80 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhc
Confidence 4799999999996 689999999999999999999763 22 2346899999999999999999997654
No 53
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.40 E-value=3.8e-13 Score=104.22 Aligned_cols=59 Identities=31% Similarity=0.418 Sum_probs=52.3
Q ss_pred CCCCCCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhh
Q 027429 41 AGERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLM 101 (223)
Q Consensus 41 ~~~~~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~ 101 (223)
++...+...++|+||||+++++.+|||++||++++++|||+++ +.+.+++|++||++|.
T Consensus 57 ~f~~~Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG--s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 57 GFENPMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG--STYIASKVNEAKDLLL 115 (116)
T ss_pred cccCCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHHh
Confidence 3456677789999999999999999999999999999999864 3578899999999995
No 54
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=2.7e-13 Score=124.99 Aligned_cols=72 Identities=26% Similarity=0.375 Sum_probs=66.0
Q ss_pred CCCCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hhHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 43 ERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 43 ~~~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~-a~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
++..+..|+|.+|||+++++.++||+.||++|...|||||..+ |++.|+.|+.||++|+|+.+|..||..+.
T Consensus 229 ~re~~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~ 301 (490)
T KOG0720|consen 229 SRELNILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLELK 301 (490)
T ss_pred hhhhcCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHHH
Confidence 3455578999999999999999999999999999999999854 78999999999999999999999998774
No 55
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=6.9e-13 Score=121.35 Aligned_cols=69 Identities=36% Similarity=0.563 Sum_probs=63.4
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CchhHHHHHHHHHHHHhhcccchhhhhhhh
Q 027429 45 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAG---QKGHEHTLLLNEAYKVLMRGDLRKDYDASI 113 (223)
Q Consensus 45 ~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~---~~a~~~f~~I~eAY~iL~dp~~R~~YD~~~ 113 (223)
.++..|||.||||..+++..|||+|||++++.+|||++. .+++.+|++|-+||.+|+||.+|..||...
T Consensus 369 kSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~ 440 (486)
T KOG0550|consen 369 KSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQ 440 (486)
T ss_pred HhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccccc
Confidence 456789999999999999999999999999999999976 347789999999999999999999999764
No 56
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=6.6e-13 Score=114.70 Aligned_cols=68 Identities=34% Similarity=0.622 Sum_probs=62.2
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chhHHHHHHHHHHHHhhcccchhhhhhhhcc
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQ 115 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~ 115 (223)
..|+|+||||++.++..||++|||+|++++|||++++ ++.+.|+.|-+||++|.|...|..||-.+.-
T Consensus 32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyaldh 100 (329)
T KOG0722|consen 32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALDH 100 (329)
T ss_pred chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhcC
Confidence 3799999999999999999999999999999999875 4668999999999999999999999976643
No 57
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.29 E-value=1.4e-12 Score=112.96 Aligned_cols=67 Identities=40% Similarity=0.600 Sum_probs=61.5
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hhHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---GHEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~---a~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
..|+|+||+|.+.|+.++|++||+++++++|||+++.. +.++|++|.+||++|+|+.+|..||+...
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~ 71 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE 71 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence 47999999999999999999999999999999998765 44579999999999999999999999875
No 58
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.29 E-value=2.6e-12 Score=113.23 Aligned_cols=57 Identities=35% Similarity=0.547 Sum_probs=50.7
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---------chhHHHHHHHHHHHHhhc
Q 027429 46 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ---------KGHEHTLLLNEAYKVLMR 102 (223)
Q Consensus 46 ~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~---------~a~~~f~~I~eAY~iL~d 102 (223)
....++|+||||++++|.+|||++||+++++||||+... .++++|++|++||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 455899999999999999999999999999999999531 256899999999999985
No 59
>PHA02624 large T antigen; Provisional
Probab=99.22 E-value=9.8e-12 Score=119.39 Aligned_cols=60 Identities=35% Similarity=0.507 Sum_probs=56.1
Q ss_pred ccCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhcccchhhh
Q 027429 48 KKNYYELLGVSVEA--NGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDY 109 (223)
Q Consensus 48 ~~d~Y~iLgv~~~a--s~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp~~R~~Y 109 (223)
..++|+||||+++| +.++||+|||++++++|||++++ .++|++|++||++|+|+.+|..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd--eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD--EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc--HHHHHHHHHHHHHHhcHHHhhhc
Confidence 46899999999999 99999999999999999999754 68999999999999999999998
No 60
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.15 E-value=7e-11 Score=97.93 Aligned_cols=66 Identities=24% Similarity=0.379 Sum_probs=58.0
Q ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCc-------hhHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 49 KNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQK-------GHEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 49 ~d~Y~iLgv~~~--as~~eIK~ayr~l~~~~HPDk~~~~-------a~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
.|||++||+++. .+..++++.|+++.+++|||+.... +.+....||+||.+|+||.+|..|-..+.
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 689999999998 8999999999999999999997532 23456899999999999999999987654
No 61
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.04 E-value=1.3e-10 Score=107.23 Aligned_cols=68 Identities=29% Similarity=0.452 Sum_probs=61.0
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------chhHHHHHHHHHHHHhhcccchhhhhhhhcc
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ-------KGHEHTLLLNEAYKVLMRGDLRKDYDASIGQ 115 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~-------~a~~~f~~I~eAY~iL~dp~~R~~YD~~~~~ 115 (223)
--|+||||||+.+++..+||++||+|+.++||||.++ +-++..++|++||..|.|...|+.|-..+..
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP 171 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP 171 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence 4689999999999999999999999999999999764 1356789999999999999999999987643
No 62
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.00 E-value=7.3e-10 Score=90.52 Aligned_cols=54 Identities=30% Similarity=0.490 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCc-------hhHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 61 ANGQEIKEAYRKLQKKYHPDIAGQK-------GHEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 61 as~~eIK~ayr~l~~~~HPDk~~~~-------a~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
.+..+|+++|+++++++|||+.... +.+.+..||+||++|+||.+|..|+..+.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 4788999999999999999985422 44678999999999999999999998765
No 63
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=2.6e-09 Score=89.62 Aligned_cols=63 Identities=30% Similarity=0.467 Sum_probs=56.7
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hhHHHHHHHHHHHHhhcccchhhhh
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK---GHEHTLLLNEAYKVLMRGDLRKDYD 110 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~---a~~~f~~I~eAY~iL~dp~~R~~YD 110 (223)
+-++|+||.|.|..+.++||+.||+|++..|||+|+++ |...|..|..||..|-|+..|..-+
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 57899999999999999999999999999999999865 6678999999999999998665444
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.62 E-value=2.5e-08 Score=87.30 Aligned_cols=66 Identities=38% Similarity=0.471 Sum_probs=57.5
Q ss_pred CccCcccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCC---C-chhHHHHHHHHHHHHhhcccchhhhhhh
Q 027429 47 KKKNYYELLGVSVE---ANGQEIKEAYRKLQKKYHPDIAG---Q-KGHEHTLLLNEAYKVLMRGDLRKDYDAS 112 (223)
Q Consensus 47 ~~~d~Y~iLgv~~~---as~~eIK~ayr~l~~~~HPDk~~---~-~a~~~f~~I~eAY~iL~dp~~R~~YD~~ 112 (223)
+..|+|.+|||+.- +...+|.++.++.+.+||||+.. . .....|+.|+.||++|+|+..|..||..
T Consensus 41 k~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~ 113 (379)
T COG5269 41 KKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN 113 (379)
T ss_pred hhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence 34799999999874 88999999999999999999863 1 2357899999999999999999999964
No 65
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.53 E-value=1.5e-07 Score=71.45 Aligned_cols=65 Identities=26% Similarity=0.268 Sum_probs=55.7
Q ss_pred ccCCCCCCCCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhcc
Q 027429 37 CNGRAGERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRG 103 (223)
Q Consensus 37 ~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp 103 (223)
....++.+.+..+..-.||||++.++.+.||.|+|+++...|||+.+.+-. -.+||||+++|...
T Consensus 44 ~y~GGF~~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSPYl--AsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 44 FYKGGFEPKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPYL--ASKINEAKDLLEGT 108 (112)
T ss_pred hhhcccccccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCHHH--HHHHHHHHHHHhcc
Confidence 334466778888999999999999999999999999999999999987633 36799999999754
No 66
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.38 E-value=3.8e-07 Score=91.62 Aligned_cols=58 Identities=31% Similarity=0.448 Sum_probs=49.4
Q ss_pred CCCCCccCcccccCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhh
Q 027429 43 ERASKKKNYYELLGVSVE----ANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLM 101 (223)
Q Consensus 43 ~~~~~~~d~Y~iLgv~~~----as~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~ 101 (223)
+..+...+.|+||+|+-+ ...+.||++|++++.+||||||++ ..++|..+|+|||.|.
T Consensus 1275 P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE-GRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1275 PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE-GREMFERVNKAYELLS 1336 (2235)
T ss_pred CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch-HHHHHHHHHHHHHHHH
Confidence 344556789999999765 355899999999999999999976 4789999999999998
No 67
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.38 E-value=3.9e-07 Score=78.33 Aligned_cols=56 Identities=30% Similarity=0.594 Sum_probs=50.0
Q ss_pred CccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hhHHHHHHHHHHH-Hhhc
Q 027429 47 KKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHTLLLNEAYK-VLMR 102 (223)
Q Consensus 47 ~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~-a~~~f~~I~eAY~-iL~d 102 (223)
+-+.+|.||||..+++.++++.+|.+|++++|||.+.++ ..+.|.+|.+||. +|+.
T Consensus 45 ~~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 45 KIMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence 346899999999999999999999999999999998876 4578999999998 6763
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.66 E-value=4.4e-05 Score=61.97 Aligned_cols=68 Identities=26% Similarity=0.537 Sum_probs=55.6
Q ss_pred CCccCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCC-------CchhHHHHHHHHHHHHhhcccchhhhhhhh
Q 027429 46 SKKKNYYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAG-------QKGHEHTLLLNEAYKVLMRGDLRKDYDASI 113 (223)
Q Consensus 46 ~~~~d~Y~iLgv~~~--as~~eIK~ayr~l~~~~HPDk~~-------~~a~~~f~~I~eAY~iL~dp~~R~~YD~~~ 113 (223)
....+||.++|.... .++..++.-|....+++|||+.. +-+.+...+||+||.+|.||-+|+.|-..+
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl 81 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKL 81 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 445789999976554 67777787999999999999843 225667899999999999999999998654
No 69
>PF13459 Fer4_15: 4Fe-4S single cluster domain
Probab=96.93 E-value=0.00015 Score=50.28 Aligned_cols=53 Identities=34% Similarity=0.698 Sum_probs=38.6
Q ss_pred cccccccccCCcceeeeeeeEeeecccCceEEEeeeC--------CCCceEEEe---cCCCcEEe
Q 027429 143 FVDENACIGCRECVHHASNTFVMDEATGCARVKVQYG--------DSDQNIEVK---IPLNRISA 196 (223)
Q Consensus 143 f~~e~~~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g--------~~~~~i~~a---iP~~~i~~ 196 (223)
.++...|+||+.|...+|..|.+++. |.++....-+ +....++.+ ||++||+|
T Consensus 2 ~vD~~~C~gcg~C~~~aP~vF~~d~~-g~a~~~~~~~~~~~~v~~~~~~~~~~Aa~~CP~~aI~v 65 (65)
T PF13459_consen 2 WVDRDRCIGCGLCVELAPEVFELDDD-GKAVVLVDGGEGEGEVPEEDEEDVREAAEACPVGAIHV 65 (65)
T ss_pred EEecccCcCccHHHhhCCccEEECCC-CCEEEEecCcccccCCCchhHHHHHHHHHhCCHhhEEC
Confidence 46778999999999999999999988 6666665321 111333333 39999987
No 70
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.85 E-value=0.00052 Score=56.81 Aligned_cols=52 Identities=38% Similarity=0.595 Sum_probs=44.8
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC---------CchhHHHHHHHHHHHHh
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAG---------QKGHEHTLLLNEAYKVL 100 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~---------~~a~~~f~~I~eAY~iL 100 (223)
.+.|.+|++...+...+|+++|+++....|||+.. +.+.+.+++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 68999999999999999999999999999999742 12456788999999754
No 71
>COG1141 Fer Ferredoxin [Energy production and conversion]
Probab=96.77 E-value=0.00017 Score=50.97 Aligned_cols=55 Identities=27% Similarity=0.569 Sum_probs=39.6
Q ss_pred ccccccccccCCcceeeeeeeEeeecccCce------EEEeeeCCC-CceEEEec---CCCcEEee
Q 027429 142 LFVDENACIGCRECVHHASNTFVMDEATGCA------RVKVQYGDS-DQNIEVKI---PLNRISAN 197 (223)
Q Consensus 142 ~f~~e~~~igc~~c~~~a~~t~~~ee~~~g~------~~~~q~g~~-~~~i~~ai---P~~~i~~~ 197 (223)
+.++...|+||+.|...+|..|.+++. |.+ .....++++ .+.++.|+ |++||+|.
T Consensus 3 v~vDrd~Cigcg~C~~~aPdvF~~~d~-G~a~~~~~~~~~~~~~~e~~~~~~~A~~~CP~~aI~v~ 67 (68)
T COG1141 3 VIVDRDTCIGCGACLAVAPDVFDYDDE-GIAFVLDGNIGEGEVPEELEEDAEDAAEACPTDAIKVE 67 (68)
T ss_pred EEechhhccccchhhhcCCcceeeCCC-cceEeccCccccccCChHHHHHHHHHHHhCCccceEec
Confidence 456788999999999999999999988 444 333333322 24445444 99999995
No 72
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.07 E-value=0.0075 Score=57.18 Aligned_cols=44 Identities=30% Similarity=0.332 Sum_probs=31.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCc---------hhHHHHHHHHHHHHh
Q 027429 57 VSVEANGQEIKEAYRKLQKKYHPDIAGQK---------GHEHTLLLNEAYKVL 100 (223)
Q Consensus 57 v~~~as~~eIK~ayr~l~~~~HPDk~~~~---------a~~~f~~I~eAY~iL 100 (223)
+..-.+.++||++|||..+..||||.+.. +++.|..+++||+..
T Consensus 396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 34447999999999999999999997643 234455566666543
No 73
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.98 E-value=0.0046 Score=51.17 Aligned_cols=64 Identities=30% Similarity=0.497 Sum_probs=49.8
Q ss_pred cccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCc-------hhHHHHHHHHHHHHhhcccchhhhhhhhc
Q 027429 51 YYELLGVSVE--ANGQEIKEAYRKLQKKYHPDIAGQK-------GHEHTLLLNEAYKVLMRGDLRKDYDASIG 114 (223)
Q Consensus 51 ~Y~iLgv~~~--as~~eIK~ayr~l~~~~HPDk~~~~-------a~~~f~~I~eAY~iL~dp~~R~~YD~~~~ 114 (223)
++.++|..+. ...+.++..|+.+.+.+|||+.... +.+.+..+|.||.+|.+|-.|..|-....
T Consensus 3 ~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~ 75 (174)
T COG1076 3 GFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA 75 (174)
T ss_pred cccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence 4455555554 3566789999999999999997632 22467899999999999999999987654
No 74
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=95.64 E-value=0.014 Score=46.20 Aligned_cols=58 Identities=21% Similarity=0.176 Sum_probs=40.4
Q ss_pred CCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhccc
Q 027429 45 ASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGD 104 (223)
Q Consensus 45 ~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp~ 104 (223)
.++......||||++..+.++|.+.|.+|....+|++++.-- .-.+|..|.+.|....
T Consensus 54 ~Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSfY--LQSKV~rAKErl~~El 111 (127)
T PF03656_consen 54 GMTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGSFY--LQSKVFRAKERLEQEL 111 (127)
T ss_dssp ---HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-HH--HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCHH--HHHHHHHHHHHHHHHH
Confidence 566678899999999999999999999999999999887532 2257888888886443
No 75
>PF13370 Fer4_13: 4Fe-4S single cluster domain; PDB: 1FXR_A 1DAX_A 1DFD_A 1WTF_A 1IR0_A 1IQZ_A 1SIZ_A 1SJ1_A 3PNI_B 2Z8Q_A ....
Probab=95.17 E-value=0.0016 Score=44.34 Aligned_cols=52 Identities=31% Similarity=0.467 Sum_probs=30.4
Q ss_pred cccccccCCcceeeeeeeEeeecccCceEEEeeeCCCC--ceEEEe---cCCCcEEe
Q 027429 145 DENACIGCRECVHHASNTFVMDEATGCARVKVQYGDSD--QNIEVK---IPLNRISA 196 (223)
Q Consensus 145 ~e~~~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~--~~i~~a---iP~~~i~~ 196 (223)
|...|++|+.|...+|..|.+++.-+...+..+..... ..+..+ ||+.||+|
T Consensus 2 D~~~Ci~Cg~C~~~aP~vF~~~d~~~~~~v~~~~~~~~~~~~~~~A~~~CP~~aI~v 58 (58)
T PF13370_consen 2 DRDKCIGCGLCVEIAPDVFDYDDDGGKAVVLDQPVPEEEEEAAREAAESCPTAAIRV 58 (58)
T ss_dssp -TTT--S-SHHHHH-TTTEEEETTSTEEECTTCCCSHCHHHHHHHHHHHSTT--EEE
T ss_pred ChhhCcCCChHHHhCcHheeEcCCCCeEEEeCCCcChHHHHHHHHHHHcCCHhhcCC
Confidence 55789999999999999999999855555544443211 223333 39999986
No 76
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=89.06 E-value=0.81 Score=38.70 Aligned_cols=38 Identities=26% Similarity=0.408 Sum_probs=31.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhh
Q 027429 58 SVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLM 101 (223)
Q Consensus 58 ~~~as~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~ 101 (223)
+++|+.+||++|+.++..+|--| ++...+|..||+.|.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd------~~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD------EKSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC------HHHHHHHHHHHHHHH
Confidence 57899999999999999999443 355678999999765
No 77
>PF13446 RPT: A repeated domain in UCH-protein
Probab=88.64 E-value=0.84 Score=31.04 Aligned_cols=46 Identities=24% Similarity=0.407 Sum_probs=34.1
Q ss_pred ccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhc
Q 027429 48 KKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMR 102 (223)
Q Consensus 48 ~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~d 102 (223)
-.+.|++|||+++.+.+.|-.+|+.... -.| .....+.+|..+|.+
T Consensus 4 ~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~-~~P--------~~~~~~r~AL~~Ia~ 49 (62)
T PF13446_consen 4 VEEAYEILGIDEDTDDDFIISAFQSKVN-DDP--------SQKDTLREALRVIAE 49 (62)
T ss_pred HHHHHHHhCcCCCCCHHHHHHHHHHHHH-cCh--------HhHHHHHHHHHHHHH
Confidence 3567999999999999999999999877 222 223446666666654
No 78
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=82.74 E-value=1.6 Score=39.33 Aligned_cols=52 Identities=25% Similarity=0.326 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCC------chhHHHHHHHHHHHHhhcccchhhhhhh
Q 027429 61 ANGQEIKEAYRKLQKKYHPDIAGQ------KGHEHTLLLNEAYKVLMRGDLRKDYDAS 112 (223)
Q Consensus 61 as~~eIK~ayr~l~~~~HPDk~~~------~a~~~f~~I~eAY~iL~dp~~R~~YD~~ 112 (223)
++..+|..+|+..++..||++... ...+.++.|.+||.+|.+...|..+|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 577889999999999999998741 3456789999999999986665555543
No 79
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=79.96 E-value=3.9 Score=31.56 Aligned_cols=43 Identities=28% Similarity=0.430 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCc------hhHHHHHHHHHHHHhhc
Q 027429 60 EANGQEIKEAYRKLQKKYHPDIAGQK------GHEHTLLLNEAYKVLMR 102 (223)
Q Consensus 60 ~as~~eIK~ayr~l~~~~HPDk~~~~------a~~~f~~I~eAY~iL~d 102 (223)
..+..+++.|.|.+-++.|||..... +++-++.|+.-.+.|..
T Consensus 5 ~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~ 53 (112)
T PF14687_consen 5 NLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK 53 (112)
T ss_pred hhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence 45678899999999999999976521 34456666666666653
No 80
>PF12797 Fer4_2: 4Fe-4S binding domain; InterPro: IPR001450 This superfamily includes proteins containing domains which bind to iron-sulphur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; they fall into several subgroups according to the nature of their iron-sulphur cluster(s) [, ]. One group, originally found in bacteria, has been termed "bacterial-type", in which the active centre is a 4Fe-4S cluster. 4Fe-4S ferredoxins may in turn be subdivided into further groups, based on their sequence properties. Most contain at least one conserved domain, including four Cys residues that bind to a 4Fe-4S centre. ; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding
Probab=78.74 E-value=0.8 Score=25.26 Aligned_cols=18 Identities=33% Similarity=0.890 Sum_probs=14.5
Q ss_pred CccccccccccCCcceee
Q 027429 141 ALFVDENACIGCRECVHH 158 (223)
Q Consensus 141 ~~f~~e~~~igc~~c~~~ 158 (223)
.++.|...|+||+.|..-
T Consensus 2 ~~~iD~~rCiGC~~C~~A 19 (22)
T PF12797_consen 2 GMVIDLERCIGCGACEVA 19 (22)
T ss_pred ceEEccccccCchhHHHh
Confidence 367789999999998653
No 81
>PF06902 Fer4_19: Divergent 4Fe-4S mono-cluster; InterPro: IPR010693 This entry represents bacterial ferredoxins such Ferredoxin-1, -2 and -soy from Streptomyces griseolus and Ferredoxin fas2 from Rhodococcus fascians, plus several bacterial hypothetical proteins that contain three highly conserved cysteine residues. These ferredoxins each bind a 3Fe-4S cluster. Ferredoxin-soy (SoyB) act as electron transport protein for the cytochrome P450-SOY system []. Ferredoxin-1 (SuaB) and Ferredoxin-2 (SubB) act as electron transport proteins for the herbicide-metabolising cytochrome P-450 SU1 and SU2 systems, respectively [, ]. Ferredoxin-fas2 also plays a role in electrontransfer, the fas operon encoding genes involved in cytokinin production and in host plant fasciation (leafy gall).
Probab=56.64 E-value=2 Score=29.78 Aligned_cols=54 Identities=20% Similarity=0.281 Sum_probs=36.5
Q ss_pred CccccccccccCCcceeeeeeeEeeecccCceEEEeeeCCCCceEEE---ecCCCcEEeee
Q 027429 141 ALFVDENACIGCRECVHHASNTFVMDEATGCARVKVQYGDSDQNIEV---KIPLNRISANR 198 (223)
Q Consensus 141 ~~f~~e~~~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~---aiP~~~i~~~~ 198 (223)
.+..+...|++-+.|...++..|...+. +-. ..-+.+.+.+.. .||-||+++.+
T Consensus 7 ~V~~d~~~C~hag~Cv~~~p~VFd~~~~-~~v---~~d~a~~~~v~~~v~~CPSGAL~~~~ 63 (64)
T PF06902_consen 7 TVTWDRERCIHAGFCVRGAPEVFDQDDE-PWV---SPDEASAEEVREAVDRCPSGALSYWD 63 (64)
T ss_pred EEEECcCcccchhhhhcCCCCcccCCCC-CcC---CcCccCHHHHHHHHHcCCccCcEEee
Confidence 4556778999999999999999999887 222 111111222322 34999998875
No 82
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=49.10 E-value=23 Score=28.01 Aligned_cols=39 Identities=21% Similarity=0.268 Sum_probs=33.9
Q ss_pred CCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 027429 46 SKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQ 84 (223)
Q Consensus 46 ~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~ 84 (223)
++-...-.||+|++..+.++|.+.|..|-....+.+++.
T Consensus 56 iTlqEa~qILnV~~~ln~eei~k~yehLFevNdkskGGS 94 (132)
T KOG3442|consen 56 ITLQEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGS 94 (132)
T ss_pred ccHHHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCcc
Confidence 445667889999999999999999999999988888764
No 83
>KOG3256 consensus NADH:ubiquinone oxidoreductase, NDUFS8/23 kDa subunit [Energy production and conversion]
Probab=48.69 E-value=15 Score=30.59 Aligned_cols=67 Identities=19% Similarity=0.333 Sum_probs=42.7
Q ss_pred CCCCCCCCCCCccccccccccCCcceeeeee---eEeeecccCceEEEeeeCCCC-c-----eEEEecCCCcEEee
Q 027429 131 SSWKGPPRPEALFVDENACIGCRECVHHASN---TFVMDEATGCARVKVQYGDSD-Q-----NIEVKIPLNRISAN 197 (223)
Q Consensus 131 ~~~~g~~~~~~~f~~e~~~igc~~c~~~a~~---t~~~ee~~~g~~~~~q~g~~~-~-----~i~~aiP~~~i~~~ 197 (223)
+.|.|.-.....-+.+..||.|.-|.-.+|. ++..++..+|.++.....=+. . --+++||++||+.-
T Consensus 95 ~RFRGehalrRyp~geerCIACklCeavCPaqaitieae~r~dgsrRttrYdIDmtkCIyCG~CqEaCPvdaiveg 170 (212)
T KOG3256|consen 95 PRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEERTDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 170 (212)
T ss_pred cccccchhhhcCCCcchhhhhHHHHHHhCCcccceeeceecCCccccceeecccceeeeeecchhhhCCccceecc
Confidence 3444443334444677899999999877764 777777778877666552111 1 12446699998753
No 84
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=43.35 E-value=1.2e+02 Score=21.83 Aligned_cols=54 Identities=19% Similarity=0.102 Sum_probs=36.0
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hhHHH----HHHHHHHHHhhc
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQK-GHEHT----LLLNEAYKVLMR 102 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~-a~~~f----~~I~eAY~iL~d 102 (223)
++--.+.|+.|-++.+||..|=.+.+++..=-..+.. +.+.| .+|..+-..|.|
T Consensus 3 RnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 3 RNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 4445677899999999999999988888765544432 23334 345555555543
No 85
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=40.49 E-value=90 Score=22.53 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=26.1
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCC
Q 027429 49 KNYYELLGVSVEANGQEIKEAYRKLQKKYHPD 80 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPD 80 (223)
++--+++|++|-++..||+.|-++..++..=-
T Consensus 3 RNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGt 34 (88)
T COG5552 3 RNIKELFNFDPPATPVEVRDAALQFVRKLSGT 34 (88)
T ss_pred cchHHHhCCCCCCCcHHHHHHHHHHHHHhcCC
Confidence 55668899999999999999988777776433
No 86
>PF14697 Fer4_21: 4Fe-4S dicluster domain; PDB: 2WSF_C 2WSE_C 2O01_C 2WSC_C 3LW5_C 1H7X_C 1H7W_A 1GT8_A 1GTE_B 1GTH_B ....
Probab=39.89 E-value=11 Score=25.39 Aligned_cols=17 Identities=47% Similarity=1.226 Sum_probs=9.2
Q ss_pred ccccccccCCcceeeee
Q 027429 144 VDENACIGCRECVHHAS 160 (223)
Q Consensus 144 ~~e~~~igc~~c~~~a~ 160 (223)
+++..|+||+.|....+
T Consensus 3 Id~~~Ci~Cg~C~~~Cp 19 (59)
T PF14697_consen 3 IDEDKCIGCGKCVRACP 19 (59)
T ss_dssp E-TTT----SCCCHHCC
T ss_pred ECcccccChhhHHhHcC
Confidence 46788999999977766
No 87
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=39.77 E-value=19 Score=17.30 Aligned_cols=13 Identities=23% Similarity=0.245 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHhh
Q 027429 89 HTLLLNEAYKVLM 101 (223)
Q Consensus 89 ~f~~I~eAY~iL~ 101 (223)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 3567778887763
No 88
>COG2879 Uncharacterized small protein [Function unknown]
Probab=37.41 E-value=54 Score=22.81 Aligned_cols=26 Identities=23% Similarity=0.175 Sum_probs=18.4
Q ss_pred HHHHHHHHhCCCCCCCchhHHHHHHH
Q 027429 69 AYRKLQKKYHPDIAGQKGHEHTLLLN 94 (223)
Q Consensus 69 ayr~l~~~~HPDk~~~~a~~~f~~I~ 94 (223)
.|-+-+++.|||+.+-.-.+.|.+-.
T Consensus 27 nYVehmr~~hPd~p~mT~~EFfrec~ 52 (65)
T COG2879 27 NYVEHMRKKHPDKPPMTYEEFFRECQ 52 (65)
T ss_pred HHHHHHHHhCcCCCcccHHHHHHHHH
Confidence 46677899999998765556665443
No 89
>COG0437 HybA Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion]
Probab=36.95 E-value=27 Score=29.76 Aligned_cols=24 Identities=33% Similarity=0.789 Sum_probs=18.3
Q ss_pred CCccccccccccCCcceeeeeeeE
Q 027429 140 EALFVDENACIGCRECVHHASNTF 163 (223)
Q Consensus 140 ~~~f~~e~~~igc~~c~~~a~~t~ 163 (223)
-.++.|...|+||..|..-.....
T Consensus 11 ~~~~~D~~rCiGC~aC~~AC~~~n 34 (203)
T COG0437 11 YAFVIDSSRCIGCKACVVACKEEN 34 (203)
T ss_pred eEEEEecccccCcHHHHHHHHHhc
Confidence 367789999999999965554444
No 90
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=35.50 E-value=45 Score=19.30 Aligned_cols=18 Identities=22% Similarity=0.458 Sum_probs=15.2
Q ss_pred CHHHHHHHHHHHHHHhCC
Q 027429 62 NGQEIKEAYRKLQKKYHP 79 (223)
Q Consensus 62 s~~eIK~ayr~l~~~~HP 79 (223)
..++.|.+.|+.++.||-
T Consensus 9 ~~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 9 NKEDKRAQLRQAALEYHE 26 (28)
T ss_pred chHHHHHHHHHHHHHhcc
Confidence 347889999999999994
No 91
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=34.72 E-value=46 Score=23.48 Aligned_cols=37 Identities=19% Similarity=0.201 Sum_probs=27.6
Q ss_pred eeeeeeeEeeecccCceEEEeeeCCCCceEEEecCCCc
Q 027429 156 VHHASNTFVMDEATGCARVKVQYGDSDQNIEVKIPLNR 193 (223)
Q Consensus 156 ~~~a~~t~~~ee~~~g~~~~~q~g~~~~~i~~aiP~~~ 193 (223)
++++...+++.++..|..+.+..-++ +.+++.+|.+.
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g-~~~~i~ip~~~ 37 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDG-KTIKIKIPPGT 37 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS--EEEEEETST-
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCC-CEEEEeccCcc
Confidence 46778899999999999988876555 68899998876
No 92
>PRK09623 vorD 2-ketoisovalerate ferredoxin oxidoreductase subunit delta; Reviewed
Probab=33.24 E-value=29 Score=25.99 Aligned_cols=56 Identities=20% Similarity=0.339 Sum_probs=29.0
Q ss_pred ccccccccccCCcceeeeeee-EeeecccCceEEEeeeCC--CCceEEEecCCCcEEeeecc
Q 027429 142 LFVDENACIGCRECVHHASNT-FVMDEATGCARVKVQYGD--SDQNIEVKIPLNRISANRKY 200 (223)
Q Consensus 142 ~f~~e~~~igc~~c~~~a~~t-~~~ee~~~g~~~~~q~g~--~~~~i~~aiP~~~i~~~~~~ 200 (223)
...+...|++|+.|....+.. +.+.+. + ...+-... .-..-..+||.+||.+....
T Consensus 46 p~i~~~~Ci~C~~C~~~CP~~ai~~~~~--~-~~~id~~~C~~Cg~Cv~~CP~~AI~~~~~~ 104 (105)
T PRK09623 46 PVVDESKCVKCYICWKFCPEPAIYIKED--G-YVAIDYDYCKGCGICANECPTKAITMVKEE 104 (105)
T ss_pred EEECcccCccccchhhhCCHhheEecCC--C-cEEeCchhCcCcchhhhhcCcCcEEecccC
Confidence 345778899999997666542 222221 1 11111100 00112234599999887654
No 93
>PF12837 Fer4_6: 4Fe-4S binding domain; InterPro: IPR001450 This superfamily includes proteins containing domains which bind to iron-sulphur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Ferredoxins are iron-sulphur proteins that mediate electron transfer in a range of metabolic reactions; they fall into several subgroups according to the nature of their iron-sulphur cluster(s) [, ]. One group, originally found in bacteria, has been termed "bacterial-type", in which the active centre is a 4Fe-4S cluster. 4Fe-4S ferredoxins may in turn be subdivided into further groups, based on their sequence properties. Most contain at least one conserved domain, including four Cys residues that bind to a 4Fe-4S centre. ; GO: 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding
Probab=32.02 E-value=8.8 Score=21.30 Aligned_cols=18 Identities=39% Similarity=1.090 Sum_probs=13.8
Q ss_pred cccccccccCCcceeeee
Q 027429 143 FVDENACIGCRECVHHAS 160 (223)
Q Consensus 143 f~~e~~~igc~~c~~~a~ 160 (223)
..++..|+||+.|....|
T Consensus 3 ~id~~~C~~Cg~C~~~Cp 20 (24)
T PF12837_consen 3 VIDPDKCIGCGDCVRVCP 20 (24)
T ss_pred EEChhhCcChhHHHHhcc
Confidence 457889999999876554
No 94
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=31.15 E-value=96 Score=20.02 Aligned_cols=43 Identities=21% Similarity=0.247 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhcccchhhhhhh
Q 027429 67 KEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDAS 112 (223)
Q Consensus 67 K~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp~~R~~YD~~ 112 (223)
.+.++...+.-||+.. ..+..+.|.+.|..|++.++....+..
T Consensus 12 ~~~~~~~~~~~~~~~~---~~~i~~~~~~~W~~l~~~~k~~y~~~a 54 (66)
T cd00084 12 SQEHRAEVKAENPGLS---VGEISKILGEMWKSLSEEEKKKYEEKA 54 (66)
T ss_pred HHHHHHHHHHHCcCCC---HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4566777888888843 456778899999999987666655543
No 95
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=28.83 E-value=1e+02 Score=21.09 Aligned_cols=42 Identities=14% Similarity=0.204 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhcccchhhhhhh
Q 027429 68 EAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDAS 112 (223)
Q Consensus 68 ~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp~~R~~YD~~ 112 (223)
+..|...+.-||+.. ..+..+.|.+.|..|++.++...++..
T Consensus 14 ~~~r~~~~~~~p~~~---~~eisk~l~~~Wk~ls~~eK~~y~~~a 55 (72)
T cd01388 14 KRHRRKVLQEYPLKE---NRAISKILGDRWKALSNEEKQPYYEEA 55 (72)
T ss_pred HHHHHHHHHHCCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 455666777899853 356778899999999988776665543
No 96
>PF08844 DUF1815: Domain of unknown function (DUF1815); InterPro: IPR014943 This entry is about 100 amino acids in length and is functionally uncharacterised.
Probab=27.70 E-value=1.2e+02 Score=22.95 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=32.5
Q ss_pred ccCceEEEeeeCCCCceEEEecCCCcEEeeecccCCceEee
Q 027429 168 ATGCARVKVQYGDSDQNIEVKIPLNRISANRKYIEQNIYLF 208 (223)
Q Consensus 168 ~~~g~~~~~q~g~~~~~i~~aiP~~~i~~~~~~~~~~~~~~ 208 (223)
...++...+.+|+. ..|..-|-.+-|+|++-.+++++.=+
T Consensus 43 ~~~~ASFmv~lg~~-HliRFLVSd~GIsW~E~rd~rEL~KL 82 (105)
T PF08844_consen 43 DMNSASFMVSLGDN-HLIRFLVSDYGISWTEMRDDRELMKL 82 (105)
T ss_pred CCCceeEEEEcCCC-cEEEEEEecCCeeEEEecCchHHHhh
Confidence 45778888888764 78888889999999999999886543
No 97
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=25.76 E-value=1.3e+02 Score=19.49 Aligned_cols=40 Identities=30% Similarity=0.301 Sum_probs=28.4
Q ss_pred HHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhcccchhhhhh
Q 027429 69 AYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDA 111 (223)
Q Consensus 69 ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp~~R~~YD~ 111 (223)
..|...+.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 14 ~~r~~~~~~~p~~~---~~~i~~~~~~~W~~ls~~eK~~y~~~ 53 (66)
T cd01390 14 EQRPKLKKENPDAS---VTEVTKILGEKWKELSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHCcCCC---HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34556677788742 45778899999999987666655554
No 98
>PRK08348 NADH-plastoquinone oxidoreductase subunit; Provisional
Probab=25.33 E-value=31 Score=26.25 Aligned_cols=20 Identities=35% Similarity=0.948 Sum_probs=15.4
Q ss_pred ccccccccccCCcceeeeee
Q 027429 142 LFVDENACIGCRECVHHASN 161 (223)
Q Consensus 142 ~f~~e~~~igc~~c~~~a~~ 161 (223)
+..+...|++|+.|....+.
T Consensus 37 i~i~~~~Ci~C~~C~~~CP~ 56 (120)
T PRK08348 37 ILYDVDKCVGCRMCVTVCPA 56 (120)
T ss_pred EEECcccCcCcccHHHHCCc
Confidence 44567899999999776664
No 99
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=25.04 E-value=1.2e+02 Score=19.98 Aligned_cols=42 Identities=19% Similarity=0.238 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhcccchhhhhh
Q 027429 67 KEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDA 111 (223)
Q Consensus 67 K~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp~~R~~YD~ 111 (223)
...++...+.-||+.. ..+..+.|.+.|.-|++.++....+.
T Consensus 12 ~~~~~~~~k~~~p~~~---~~~i~~~~~~~W~~l~~~eK~~y~~~ 53 (69)
T PF00505_consen 12 CKEKRAKLKEENPDLS---NKEISKILAQMWKNLSEEEKAPYKEE 53 (69)
T ss_dssp HHHHHHHHHHHSTTST---HHHHHHHHHHHHHCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccc---cccchhhHHHHHhcCCHHHHHHHHHH
Confidence 3455666777899865 46778889999999986665554443
No 100
>COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit [Energy production and conversion]
Probab=24.63 E-value=81 Score=23.51 Aligned_cols=58 Identities=26% Similarity=0.493 Sum_probs=32.3
Q ss_pred ccccccccccCCcceeeeeeeEeeecccCceEEEeeeCC-CCceEEE-ecCCCcEEeeecc
Q 027429 142 LFVDENACIGCRECVHHASNTFVMDEATGCARVKVQYGD-SDQNIEV-KIPLNRISANRKY 200 (223)
Q Consensus 142 ~f~~e~~~igc~~c~~~a~~t~~~ee~~~g~~~~~q~g~-~~~~i~~-aiP~~~i~~~~~~ 200 (223)
--+++..|++|..|-+..|..-...+.-+.- ..+-..- -+=-|-. .+|+.||.+|...
T Consensus 30 Pv~d~~kCi~C~~C~~yCPe~~i~~~~~~~~-~~idYdyCKGCGICa~vCP~kaI~Mv~E~ 89 (91)
T COG1144 30 PVVDEDKCINCKLCWLYCPEPAILEEEGGYK-VRIDYDYCKGCGICANVCPVKAIEMVREE 89 (91)
T ss_pred eEEcccccccCceeEEECCchheeeccCCcc-ceeEcccccCceechhhCChhheEeEeec
Confidence 3468899999999999988753333321111 1011100 0012332 3499999998643
No 101
>cd01389 MATA_HMG-box MATA_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include the fungal mating type gene products MC, MATA1 and Ste11.
Probab=23.21 E-value=1.4e+02 Score=20.58 Aligned_cols=42 Identities=7% Similarity=0.071 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHhhcccchhhhhh
Q 027429 67 KEAYRKLQKKYHPDIAGQKGHEHTLLLNEAYKVLMRGDLRKDYDA 111 (223)
Q Consensus 67 K~ayr~l~~~~HPDk~~~~a~~~f~~I~eAY~iL~dp~~R~~YD~ 111 (223)
.+.++..++.-||+.. ..+..+.|.+.|..|++.++...++.
T Consensus 13 ~~~~r~~~~~~~p~~~---~~eisk~~g~~Wk~ls~eeK~~y~~~ 54 (77)
T cd01389 13 RQDKHAQLKTENPGLT---NNEISRIIGRMWRSESPEVKAYYKEL 54 (77)
T ss_pred HHHHHHHHHHHCCCCC---HHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 4567778888899863 45777889999999987666555444
No 102
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=22.43 E-value=25 Score=24.20 Aligned_cols=29 Identities=38% Similarity=0.751 Sum_probs=21.2
Q ss_pred cCcccccCCCCCCCHHHH-HHHHHHHHHHhCCCC
Q 027429 49 KNYYELLGVSVEANGQEI-KEAYRKLQKKYHPDI 81 (223)
Q Consensus 49 ~d~Y~iLgv~~~as~~eI-K~ayr~l~~~~HPDk 81 (223)
.+++++||.++ +++ ...........|||-
T Consensus 6 ~~~~~i~G~~~----~~~~~~~~~~~~~~ihpdD 35 (91)
T PF08447_consen 6 DNFYEIFGYSP----EEIGKPDFEEWLERIHPDD 35 (91)
T ss_dssp THHHHHHTS-H----HHHTCBEHHHHHHHB-TTT
T ss_pred HHHHHHhCCCH----HHhccCCHHHHHhhcCHHH
Confidence 57899999965 666 666777888999984
No 103
>CHL00065 psaC photosystem I subunit VII
Probab=22.04 E-value=36 Score=23.92 Aligned_cols=61 Identities=20% Similarity=0.331 Sum_probs=31.3
Q ss_pred cccccccCCcceeeeee-eEeeecccC--ceEEEeeeCCCC----ceEEEecCCCcEEeeecccCCce
Q 027429 145 DENACIGCRECVHHASN-TFVMDEATG--CARVKVQYGDSD----QNIEVKIPLNRISANRKYIEQNI 205 (223)
Q Consensus 145 ~e~~~igc~~c~~~a~~-t~~~ee~~~--g~~~~~q~g~~~----~~i~~aiP~~~i~~~~~~~~~~~ 205 (223)
+...|++|+.|....+. .+.+++..+ +.........+. ..-..++|.+||.|.....+..-
T Consensus 7 ~~~~Ci~Cg~C~~~CP~~~i~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~~~~~~~~~ 74 (81)
T CHL00065 7 IYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLGHETT 74 (81)
T ss_pred ccccCCChhHHHHHCCccchhheeccccccccccccCCCCcCCChhhhhhhcCccccEEEEEecceee
Confidence 45689999999777763 233332211 111111111110 11223449999998877655443
No 104
>COG3719 Rna Ribonuclease I [Translation, ribosomal structure and biogenesis]
Probab=21.47 E-value=1.9e+02 Score=25.43 Aligned_cols=85 Identities=18% Similarity=0.081 Sum_probs=54.4
Q ss_pred cccCCCCCCcccccCCccccceeccCCCCCCCCCccCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHH
Q 027429 14 GYVNPNKSSLRARWGQRCSVIRCCNGRAGERASKKKNYYELLGVSVEANGQEIKEAYRKLQKKYHPDIAGQKGHEHTLLL 93 (223)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIK~ayr~l~~~~HPDk~~~~a~~~f~~I 93 (223)
|||+.|.+....+ ..+..|-... .........-++|.|.|++. -|+--|+| |=-......++.|...
T Consensus 92 GLWPqn~~~~~~~----~~pr~cr~~~--~~~lP~v~~~~l~~vmPg~~--L~~heW~K-----HGtC~g~s~~~YFa~~ 158 (249)
T COG3719 92 GLWPQNENGRAVR----DYPRFCRGRP--WPRLPEVIASQLLDVMPGAG--LERHEWRK-----HGTCSGLSQEAYFATT 158 (249)
T ss_pred ccCCCCCCCcccc----cChhhhcCCC--cccCCHHHHHHHhhcCCchh--hhhhhHHh-----cCccCCCCHHHHHHHH
Confidence 8999988885544 2223343311 11222233347888888775 23333433 5555556678999999
Q ss_pred HHHHHHhhcccchhhhhh
Q 027429 94 NEAYKVLMRGDLRKDYDA 111 (223)
Q Consensus 94 ~eAY~iL~dp~~R~~YD~ 111 (223)
.++++.|..|..+...+.
T Consensus 159 r~l~~~l~~p~~~~~~a~ 176 (249)
T COG3719 159 RRLFEELKLPPVRKLLAD 176 (249)
T ss_pred HHHHHHhcCCcccccccc
Confidence 999999999988887775
No 105
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=20.85 E-value=1.1e+02 Score=31.58 Aligned_cols=39 Identities=10% Similarity=0.172 Sum_probs=30.4
Q ss_pred ceeeeeeeEeeecccCceEEEeee------CCC------CceEEEecCCCc
Q 027429 155 CVHHASNTFVMDEATGCARVKVQY------GDS------DQNIEVKIPLNR 193 (223)
Q Consensus 155 c~~~a~~t~~~ee~~~g~~~~~q~------g~~------~~~i~~aiP~~~ 193 (223)
.++.+.+.+++++.+.|+.+.+.+ +.+ ..++++.||+|.
T Consensus 657 ~dI~y~l~vtLEeLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpGV 707 (871)
T TIGR03835 657 VNLVYEEEVPQILFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPITS 707 (871)
T ss_pred cceEEecccCHHHHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCCC
Confidence 368889999999999998888744 222 246888889998
No 106
>COG1146 Ferredoxin [Energy production and conversion]
Probab=20.62 E-value=1.4e+02 Score=20.13 Aligned_cols=55 Identities=25% Similarity=0.479 Sum_probs=27.1
Q ss_pred ccccccccCCcceeeeee-eEeeecccCceEEEeeeCCCCceEEE-----ecCCCcEEeeeccc
Q 027429 144 VDENACIGCRECVHHASN-TFVMDEATGCARVKVQYGDSDQNIEV-----KIPLNRISANRKYI 201 (223)
Q Consensus 144 ~~e~~~igc~~c~~~a~~-t~~~ee~~~g~~~~~q~g~~~~~i~~-----aiP~~~i~~~~~~~ 201 (223)
++...|.||+.|....|. .|.+.+..++..+.+.. +.-+.. ++|++||.......
T Consensus 5 Id~~~C~~c~~C~~~CP~~~~~~~~~~~~~~~~~~~---e~C~~C~~C~~~CP~~aI~~~~~~~ 65 (68)
T COG1146 5 IDYDKCIGCGICVEVCPAGVFDLGEDEGGKPVVARP---EECIDCGLCELACPVGAIKVDILRP 65 (68)
T ss_pred ECchhcCCCChheeccChhhEEeccccCcceeEecc---ccCccchhhhhhCCcceEEEecccc
Confidence 345568888888766654 34443333222122211 122222 34888877655543
No 107
>PRK14028 pyruvate ferredoxin oxidoreductase subunit gamma/delta; Provisional
Probab=20.16 E-value=3.6e+02 Score=23.88 Aligned_cols=19 Identities=32% Similarity=0.808 Sum_probs=15.3
Q ss_pred cccccccccCCcceeeeee
Q 027429 143 FVDENACIGCRECVHHASN 161 (223)
Q Consensus 143 f~~e~~~igc~~c~~~a~~ 161 (223)
..+...|++|+.|...++.
T Consensus 243 ~id~~~Ci~C~~C~~~CP~ 261 (312)
T PRK14028 243 VIDHSKCIMCRKCWLYCPD 261 (312)
T ss_pred EECcccCcCcccccccCCh
Confidence 3477899999999887764
Done!