Query 027432
Match_columns 223
No_of_seqs 314 out of 1648
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 16:25:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027432.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027432hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zzka1 d.51.1.1 (A:11-85) HnR 99.7 1.7E-17 1.2E-21 116.5 6.4 73 96-168 2-74 (75)
2 d1m9oa_ g.66.1.1 (A:) Tristetr 99.7 1.1E-17 8.2E-22 104.1 3.2 37 24-60 3-39 (40)
3 d1wvna1 d.51.1.1 (A:5-74) Poly 99.7 3.3E-17 2.4E-21 113.8 5.9 69 98-166 2-70 (70)
4 d1j4wa1 d.51.1.1 (A:1-74) Far 99.7 3E-17 2.2E-21 115.0 5.0 72 97-168 2-73 (74)
5 d1rgoa1 g.66.1.1 (A:151-186) B 99.7 7.2E-18 5.3E-22 102.6 1.1 35 25-59 1-35 (36)
6 d1m9oa_ g.66.1.1 (A:) Tristetr 99.6 6.9E-17 5E-21 100.4 3.3 36 187-222 4-40 (40)
7 d1j4wa2 d.51.1.1 (A:104-174) F 99.6 2.1E-16 1.5E-20 109.9 6.0 67 99-165 2-71 (71)
8 d1dtja_ d.51.1.1 (A:) Neuro-on 99.6 3.4E-16 2.5E-20 109.6 6.4 69 98-166 3-74 (74)
9 d1rgoa1 g.66.1.1 (A:151-186) B 99.6 2.7E-17 1.9E-21 100.0 0.3 34 187-220 1-35 (36)
10 d2axya1 d.51.1.1 (A:11-81) Pol 99.6 3.2E-16 2.3E-20 109.0 4.8 69 97-167 3-71 (71)
11 d1x4na1 d.51.1.1 (A:8-86) Far 99.6 7E-16 5.1E-20 109.2 6.5 72 96-167 6-77 (79)
12 d1rgoa2 g.66.1.1 (A:187-220) B 99.6 1.1E-16 7.7E-21 96.0 0.9 33 24-56 2-34 (34)
13 d1x4ma1 d.51.1.1 (A:8-88) Far 99.6 9.1E-16 6.7E-20 109.2 5.2 72 96-167 6-79 (81)
14 d1we8a_ d.51.1.1 (A:) Tudor an 99.5 1.9E-14 1.4E-18 106.8 7.4 73 97-169 14-88 (104)
15 d2ctla1 d.51.1.1 (A:8-91) Vigi 99.5 4E-14 2.9E-18 101.1 6.5 73 97-169 9-82 (84)
16 d1rgoa2 g.66.1.1 (A:187-220) B 99.4 3.4E-15 2.5E-19 89.3 0.0 30 188-217 4-34 (34)
17 d2ctea1 d.51.1.1 (A:8-88) Vigi 99.4 1.4E-13 1E-17 97.7 6.1 75 93-169 5-79 (81)
18 d2ctma1 d.51.1.1 (A:8-88) Vigi 99.4 3.3E-13 2.4E-17 95.7 7.2 73 95-168 7-79 (81)
19 d2cpqa1 d.51.1.1 (A:212-289) F 99.4 1.5E-13 1.1E-17 97.1 4.0 71 96-170 6-77 (78)
20 d2ctja1 d.51.1.1 (A:8-89) Vigi 99.4 5.8E-13 4.2E-17 94.5 6.6 74 95-170 7-81 (82)
21 d1viga_ d.51.1.1 (A:) Vigilin 99.3 5.5E-13 4E-17 92.3 5.7 67 97-165 4-70 (71)
22 d2ba0a3 d.51.1.1 (A:136-219) E 99.3 1E-12 7.3E-17 94.1 5.3 65 100-170 3-67 (84)
23 d2ctka1 d.51.1.1 (A:8-98) Vigi 99.3 1.6E-12 1.2E-16 93.9 4.8 71 97-169 9-79 (91)
24 d1tuaa1 d.51.1.1 (A:1-84) Hypo 99.1 4.1E-12 3E-16 90.8 1.2 71 100-170 5-75 (84)
25 d2ctfa1 d.51.1.1 (A:7-96) Vigi 99.1 7.1E-11 5.2E-15 85.2 6.9 68 96-168 19-87 (90)
26 d2je6i3 d.51.1.1 (I:153-221) E 99.0 1.1E-11 7.9E-16 85.4 -1.5 64 100-169 3-67 (69)
27 d2z0sa2 d.51.1.1 (A:148-234) E 98.9 1.2E-09 8.8E-14 78.2 5.9 65 100-170 3-68 (87)
28 d1e3ha4 d.52.3.1 (A:579-632) P 98.7 4.9E-10 3.5E-14 73.4 -0.5 45 99-149 4-48 (54)
29 d1tuaa2 d.51.1.1 (A:85-188) Hy 98.6 5.1E-09 3.7E-13 77.2 3.1 56 108-170 23-78 (104)
30 d1k1ga_ d.51.1.1 (A:) RNA spli 98.2 1.1E-06 7.7E-11 66.2 7.1 71 98-168 3-96 (122)
31 d2cqea2 g.66.1.1 (A:429-457) Z 98.0 1.7E-06 1.2E-10 47.9 2.3 26 28-54 4-29 (29)
32 d2cqea2 g.66.1.1 (A:429-457) Z 97.8 4.8E-06 3.5E-10 46.1 2.3 25 191-215 5-29 (29)
33 d2bl5a1 d.51.1.1 (A:1-134) Qua 97.7 1.8E-05 1.3E-09 60.1 4.7 69 99-167 3-101 (134)
34 d2cqea1 g.66.1.1 (A:458-513) Z 96.8 0.00015 1.1E-08 46.4 1.2 22 32-53 2-23 (56)
35 d2asba3 d.52.3.1 (A:263-329) T 96.0 0.0015 1.1E-07 43.5 2.4 38 97-134 25-62 (67)
36 d2cqea1 g.66.1.1 (A:458-513) Z 95.3 0.0027 1.9E-07 40.4 1.3 21 194-214 2-23 (56)
37 d1hh2p3 d.52.3.1 (P:277-344) T 95.2 0.004 2.9E-07 41.4 2.1 40 97-136 26-65 (68)
38 d2fc6a1 g.66.1.1 (A:8-44) Targ 94.3 0.0052 3.8E-07 35.4 0.7 27 27-53 10-36 (37)
39 d1wh9a_ d.52.3.1 (A:) Ribosoma 86.0 0.083 6E-06 36.7 0.5 29 98-126 35-63 (92)
40 d2fc6a1 g.66.1.1 (A:8-44) Targ 84.8 0.17 1.2E-05 28.9 1.3 26 189-214 10-36 (37)
41 d2uubc1 d.52.3.1 (C:2-106) Rib 80.7 0.18 1.3E-05 35.6 0.5 29 98-126 61-89 (105)
42 d1egaa2 d.52.3.1 (A:183-295) G 74.5 0.29 2.1E-05 34.9 -0.0 30 98-127 49-79 (113)
43 d2ja9a2 d.51.1.1 (A:152-236) R 68.0 4.9 0.00035 26.7 5.2 62 100-167 3-66 (85)
44 d1wf3a2 d.52.3.1 (A:181-298) G 65.8 0.58 4.3E-05 33.6 -0.0 29 99-127 51-80 (118)
45 d2qalc1 d.52.3.1 (C:1-105) Rib 64.3 0.54 3.9E-05 33.1 -0.5 29 98-126 61-89 (105)
46 d2asba2 d.52.3.1 (A:184-262) T 63.9 0.76 5.5E-05 30.7 0.3 27 107-133 47-74 (79)
47 d1hh2p2 d.52.3.1 (P:199-276) T 63.4 1.3 9.5E-05 29.4 1.4 27 107-133 47-74 (78)
48 d1ansa_ g.11.1.1 (A:) Neurotox 40.2 5.3 0.00038 20.4 1.1 10 40-49 9-18 (27)
49 d1mlaa2 d.58.23.1 (A:128-197) 32.4 13 0.00093 23.4 2.4 50 111-163 7-58 (70)
50 d1o4ua2 d.41.2.1 (A:1-103) Qui 24.9 34 0.0025 22.6 3.7 50 119-168 49-101 (103)
51 d2f1fa2 d.58.18.6 (A:78-163) A 20.5 73 0.0053 20.4 4.6 42 119-164 23-64 (86)
No 1
>d1zzka1 d.51.1.1 (A:11-85) HnRNP K, KH3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=1.7e-17 Score=116.46 Aligned_cols=73 Identities=30% Similarity=0.494 Sum_probs=68.4
Q ss_pred CcceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhc
Q 027432 96 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 168 (223)
Q Consensus 96 ~~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~ 168 (223)
...|.++.||.+++|.||||+|++|++|+++|||+|+|.+...+..+|.|+|+|++++++.|+.+|.++++++
T Consensus 2 p~~t~~i~VP~~~vg~iIG~~G~~I~~I~~~sga~I~i~~~~~~~~~r~i~I~G~~~~v~~A~~~I~~~i~e~ 74 (75)
T d1zzka1 2 PIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 74 (75)
T ss_dssp CCEEEEEEEETTTGGGGTCGGGHHHHHHHHHHCCEEEECCTTSCSSEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEChHhcCeeECCCCchHHHHHhhcCCeEEEccCCCCCCceEEEEEeCHHHHHHHHHHHHHHHHhc
Confidence 4568899999999999999999999999999999999987777788999999999999999999999999875
No 2
>d1m9oa_ g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.67 E-value=1.1e-17 Score=104.06 Aligned_cols=37 Identities=32% Similarity=0.745 Sum_probs=35.0
Q ss_pred CCCccccccCcccccccCCCCCCCCCCcccccccCCC
Q 027432 24 GPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGKP 60 (223)
Q Consensus 24 ~~~~~kt~~C~~~~~~g~C~~g~~C~faH~~~el~~~ 60 (223)
.+++|||+||++|...|.|+||++|+||||++|||.+
T Consensus 3 ~~~~yKT~lC~~~~~~g~C~~G~~C~FAHg~~ELr~~ 39 (40)
T d1m9oa_ 3 TSSRYKTELCRTYSESGRCRYGAKCQFAHGLGELRQA 39 (40)
T ss_dssp CSSCCCSCCCSGGGGTSCCTTTTTCSSCSSSCCGGGT
T ss_pred CCCccccccChhhhcCCcCCCCCCCCCCCCHHHhcCC
Confidence 5689999999999999999999999999999999975
No 3
>d1wvna1 d.51.1.1 (A:5-74) Poly(RC)-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=3.3e-17 Score=113.83 Aligned_cols=69 Identities=25% Similarity=0.445 Sum_probs=65.1
Q ss_pred ceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhh
Q 027432 98 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIV 166 (223)
Q Consensus 98 ~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~ 166 (223)
.|.++.||++.+|.||||+|.+|++|+++||++|+|.+...+..+|.|+|+|++++++.|+.+|.++|.
T Consensus 2 ~T~~i~VP~~~vg~iIGk~G~~I~~I~~~tga~I~i~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~~is 70 (70)
T d1wvna1 2 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLS 70 (70)
T ss_dssp EEEEEEEEGGGHHHHHCGGGHHHHHHHHHHCCEEEECCCCTTCSEEEEEEEECHHHHHHHHHHHHHHTC
T ss_pred eEEEEEEChHhcceeECCCChHHHHHHHHcCcEEEEcCCCCCCCcEEEEEEeCHHHHHHHHHHHHHHcC
Confidence 588999999999999999999999999999999999887778889999999999999999999998873
No 4
>d1j4wa1 d.51.1.1 (A:1-74) Far upstream binding element, FBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=3e-17 Score=115.00 Aligned_cols=72 Identities=17% Similarity=0.385 Sum_probs=67.4
Q ss_pred cceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhc
Q 027432 97 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 168 (223)
Q Consensus 97 ~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~ 168 (223)
+.++++.||.+.+|+||||+|++|++|+++|||+|+|.+..++..+|.|+|+|+++++++|+.+|.++|++.
T Consensus 2 ~~~~~i~VP~~~vg~iIGk~G~~I~~I~~~tga~I~i~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~~i~~~ 73 (74)
T d1j4wa1 2 SHMIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRAQHAAEIITDLLRSV 73 (74)
T ss_dssp CEEEEEEEEHHHHHHHHCGGGHHHHHHHHHHCCEEEEECCTTSCSEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCHHHCCeeECCCCcHHHHHHHHcCCEEEeccCCCCCCeeEEEEEeCHHHHHHHHHHHHHHHHhc
Confidence 467899999999999999999999999999999999987777788999999999999999999999999864
No 5
>d1rgoa1 g.66.1.1 (A:151-186) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=7.2e-18 Score=102.60 Aligned_cols=35 Identities=40% Similarity=0.856 Sum_probs=33.1
Q ss_pred CCccccccCcccccccCCCCCCCCCCcccccccCC
Q 027432 25 PTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWELGK 59 (223)
Q Consensus 25 ~~~~kt~~C~~~~~~g~C~~g~~C~faH~~~el~~ 59 (223)
+++|||+||++|...|.|+||++|+||||++|||.
T Consensus 1 ~~kyKT~lC~~~~~~g~C~~G~~C~FAHg~~ELr~ 35 (36)
T d1rgoa1 1 STRYKTELCRPFEESGTCKYGEKCQFAHGFHELRS 35 (36)
T ss_dssp CTTTTSSBCHHHHHHSCCTTGGGCSSBSSGGGCCC
T ss_pred CCCcchhhCcchhcCCcCCCCCcCCCcCCHHHccC
Confidence 47999999999999999999999999999999995
No 6
>d1m9oa_ g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=6.9e-17 Score=100.45 Aligned_cols=36 Identities=47% Similarity=1.090 Sum_probs=33.5
Q ss_pred CcccccccCcccc-CCcCCCCCCCccccCccccCcCC
Q 027432 187 SSNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRKTA 222 (223)
Q Consensus 187 ~~~~kt~~C~~~~-~g~C~~g~~C~faH~~~elr~~~ 222 (223)
+.+|||+||++|. .|.|+||++|+||||++|||++.
T Consensus 4 ~~~yKT~lC~~~~~~g~C~~G~~C~FAHg~~ELr~~n 40 (40)
T d1m9oa_ 4 SSRYKTELCRTYSESGRCRYGAKCQFAHGLGELRQAN 40 (40)
T ss_dssp SSCCCSCCCSGGGGTSCCTTTTTCSSCSSSCCGGGTC
T ss_pred CCccccccChhhhcCCcCCCCCCCCCCCCHHHhcCCC
Confidence 5899999999998 69999999999999999999863
No 7
>d1j4wa2 d.51.1.1 (A:104-174) Far upstream binding element, FBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2.1e-16 Score=109.88 Aligned_cols=67 Identities=34% Similarity=0.585 Sum_probs=60.4
Q ss_pred eEEEEeccccccceecCCCcchhhhhhhcCCeEEeccC---CCCCCceEEEEcCCHHHHHHHHHHHHhhh
Q 027432 99 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELI 165 (223)
Q Consensus 99 t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~---~~~~~~r~v~I~G~~~~i~~A~~lI~~~i 165 (223)
+.++.||++.+|.||||+|++|++|++.|||+|+|.+. ..+..+|.|+|+|+++++++|+.+|.++|
T Consensus 2 ~~~~~IP~~~vg~IIGk~G~~Ik~I~~~sga~I~i~~~~~~~~~~~~r~v~I~G~~~~v~~A~~~I~e~i 71 (71)
T d1j4wa2 2 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 71 (71)
T ss_dssp EEEEEEETTTHHHHHCGGGHHHHHHHHHHCCEEEEECCCTTTSCTTEEEEEEECCHHHHHHHHHHHHHHC
T ss_pred EEEEEEChHhcceEECCCCcChHHHHhhcCcEEEEeecCCCCCCCCeEEEEEEeCHHHHHHHHHHHHhhC
Confidence 57899999999999999999999999999999999532 33456799999999999999999999875
No 8
>d1dtja_ d.51.1.1 (A:) Neuro-oncological ventral antigen 2, nova-2, KH3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=3.4e-16 Score=109.62 Aligned_cols=69 Identities=25% Similarity=0.409 Sum_probs=62.1
Q ss_pred ceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccC---CCCCCceEEEEcCCHHHHHHHHHHHHhhhh
Q 027432 98 ATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH---EADPNLRNIELEGSFEQIKQASAMVRELIV 166 (223)
Q Consensus 98 ~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~---~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~ 166 (223)
.++++.||++.+|.||||+|++|++|+++|||+|+|.+. .++..+|.|+|+|+++++++|+.+|.++|.
T Consensus 3 ~~i~i~VP~~~vg~iIGk~G~~Ik~I~~~sga~I~i~~~~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~~is 74 (74)
T d1dtja_ 3 ELVEMAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVT 74 (74)
T ss_dssp EEEEEEEETTTHHHHHCSTTHHHHHHHHHHCCEEEECCTTCCSTTCCEEEEEEEESHHHHHHHHHHHHHHCC
T ss_pred EEEEEEeCHHHcceeECCCChhHHHHHHHcCCEEEEccCCCCCCCCCceEEEEEeCHHHHHHHHHHHHHHcC
Confidence 467999999999999999999999999999999999543 345678999999999999999999998873
No 9
>d1rgoa1 g.66.1.1 (A:151-186) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=2.7e-17 Score=100.04 Aligned_cols=34 Identities=50% Similarity=1.151 Sum_probs=31.8
Q ss_pred CcccccccCcccc-CCcCCCCCCCccccCccccCc
Q 027432 187 SSNFKTKLCGNFA-KGSCTFGDRCHFAHGAAELRK 220 (223)
Q Consensus 187 ~~~~kt~~C~~~~-~g~C~~g~~C~faH~~~elr~ 220 (223)
+++|||+||++|. .|.|+||++|+||||++|||.
T Consensus 1 ~~kyKT~lC~~~~~~g~C~~G~~C~FAHg~~ELr~ 35 (36)
T d1rgoa1 1 STRYKTELCRPFEESGTCKYGEKCQFAHGFHELRS 35 (36)
T ss_dssp CTTTTSSBCHHHHHHSCCTTGGGCSSBSSGGGCCC
T ss_pred CCCcchhhCcchhcCCcCCCCCcCCCcCCHHHccC
Confidence 3689999999998 799999999999999999995
No 10
>d2axya1 d.51.1.1 (A:11-81) Poly(RC)-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=3.2e-16 Score=109.00 Aligned_cols=69 Identities=28% Similarity=0.413 Sum_probs=63.2
Q ss_pred cceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhh
Q 027432 97 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 167 (223)
Q Consensus 97 ~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~ 167 (223)
+.|.+++||++.+|.||||+|++|++|+++|||+|+|.+. +..+|+|+|+|+++++.+|+.+|.++|.+
T Consensus 3 ~vt~~i~vp~~~~g~IIGk~G~~I~~I~~~tga~I~i~~~--~~~er~v~I~G~~~~v~~A~~~I~~~l~E 71 (71)
T d2axya1 3 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKAFAMIIDKLEE 71 (71)
T ss_dssp CEEEEEEEEHHHHHHHHCGGGHHHHHHHHHHCCEEEECSS--CCSEEEEEEEECHHHHHHHHHHHHHHHHC
T ss_pred cEEEEEEECHHHcCeEECCCChhHHHHHHHhCCEEEEcCC--CCCcceEEEEECHHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999999999999999754 34589999999999999999999999864
No 11
>d1x4na1 d.51.1.1 (A:8-86) Far upstream binding element, FBP {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=7e-16 Score=109.18 Aligned_cols=72 Identities=24% Similarity=0.432 Sum_probs=67.8
Q ss_pred CcceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhh
Q 027432 96 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVR 167 (223)
Q Consensus 96 ~~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~ 167 (223)
...+.+|.||.+.+|.|||++|.+|++|++.|||+|.|.+...+..++.|+|+|++++++.|+.+|.++|.+
T Consensus 6 ~~~t~~i~IP~~~~g~iIG~~G~~i~~I~~~tg~~I~i~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~~i~e 77 (79)
T d1x4na1 6 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEK 77 (79)
T ss_dssp CCEEEEEEEEHHHHHHHHCSSSHHHHHHHHHSCCEEEECSCCTTCSEEEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEChHhhcceECCCchhHHHHHHHhCCEEEEcCCCCCCCceEEEEEeCHHHHHHHHHHHHHHHHc
Confidence 457889999999999999999999999999999999998877788899999999999999999999999986
No 12
>d1rgoa2 g.66.1.1 (A:187-220) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.1e-16 Score=96.04 Aligned_cols=33 Identities=27% Similarity=0.664 Sum_probs=30.8
Q ss_pred CCCccccccCcccccccCCCCCCCCCCcccccc
Q 027432 24 GPTVVKSRMCNRLNSAEGCKFGDKCHFAHGEWE 56 (223)
Q Consensus 24 ~~~~~kt~~C~~~~~~g~C~~g~~C~faH~~~e 56 (223)
+.++|||+||++|...|.|+||++|+||||++|
T Consensus 2 rhpkyKT~lC~~f~~~g~C~yG~~C~FaHg~~E 34 (34)
T d1rgoa2 2 RHPKYKTELCRTFHTIGFCPYGPRCHFIHNADE 34 (34)
T ss_dssp CCTTTTCSBCHHHHHHSCCTTGGGCSSBCCSCC
T ss_pred CCCCccchhccccCCCCcCCCCCcccCcCCCCC
Confidence 346899999999999999999999999999987
No 13
>d1x4ma1 d.51.1.1 (A:8-88) Far upstream binding element, FBP {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=9.1e-16 Score=109.20 Aligned_cols=72 Identities=32% Similarity=0.458 Sum_probs=65.2
Q ss_pred CcceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccC--CCCCCceEEEEcCCHHHHHHHHHHHHhhhhh
Q 027432 96 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH--EADPNLRNIELEGSFEQIKQASAMVRELIVR 167 (223)
Q Consensus 96 ~~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~--~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~ 167 (223)
...+.+|+||.+.+|.||||+|++|++|+++|||+|+|.+. .+...+|.|+|+|++++|++|+.+|.++|.+
T Consensus 6 ~~~~~~i~Vp~~~~g~iIGk~G~~Ik~I~~~tga~I~i~~~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~~i~e 79 (81)
T d1x4ma1 6 GNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRD 79 (81)
T ss_dssp CCEEEEEEECHHHHHHHSCSSSSHHHHHHHHHTSEEEECCSCCCSSCSCEEEEEEECTTTHHHHHHHHHHHHCC
T ss_pred ccEEEEEEECHHHcCeeECCCCchHHHHHHHhCCeEEEccCCCCCCCCceEEEEEeCHHHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999643 3445689999999999999999999999976
No 14
>d1we8a_ d.51.1.1 (A:) Tudor and KH domain containing protein, Tdrkh {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=1.9e-14 Score=106.82 Aligned_cols=73 Identities=25% Similarity=0.420 Sum_probs=64.9
Q ss_pred cceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCC--CCCCceEEEEcCCHHHHHHHHHHHHhhhhhcC
Q 027432 97 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHE--ADPNLRNIELEGSFEQIKQASAMVRELIVRIG 169 (223)
Q Consensus 97 ~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~--~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~~ 169 (223)
..+++|+||.+.+|.||||+|.+|++|+++|||+|+|.+.. ....+|+|+|+|++++|+.|+.+|.++|.+.+
T Consensus 14 ~v~~~i~IP~~~vg~vIGk~G~~Ik~I~~~tga~I~i~~~~~~~~~~~r~v~I~G~~~~v~~A~~~I~~~i~e~~ 88 (104)
T d1we8a_ 14 PVFEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVSEDE 88 (104)
T ss_dssp EEEEEEEEETTTHHHHHTTTSHHHHHHHHHHCCEEEECCSSCCSSSSEEEEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEECHHHhcceECCCCcchHHHHHHcCCEEEECCCCCCCCCCccEEEEEeCHHHHHHHHHHHHHHHhCcH
Confidence 46789999999999999999999999999999999996443 34467999999999999999999999997644
No 15
>d2ctla1 d.51.1.1 (A:8-91) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=4e-14 Score=101.11 Aligned_cols=73 Identities=18% Similarity=0.282 Sum_probs=65.6
Q ss_pred cceEEEEeccccccceecCCCcchhhhhhhcCCeEEecc-CCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhcC
Q 027432 97 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRD-HEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 169 (223)
Q Consensus 97 ~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~-~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~~ 169 (223)
..+.++.||...++.|||++|++|++|+++|||+|++.+ ...+..++.|+|+|+.++|..|+.+|.+++.+.+
T Consensus 9 ~~~~~i~Vp~~~~~~iIG~~G~~i~~I~~~t~~~I~~~~~~~~~~~~~~i~I~G~~e~v~~A~~~I~~~i~e~e 82 (84)
T d2ctla1 9 SFKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILRIVGELE 82 (84)
T ss_dssp TCEEEEECCTTTHHHHSCSSSCHHHHHHHHHTCEEECCCTTTCSSCSSEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEECHHHHhhhcCCCchhHHHHHHHhCCEEEECCCCCCCCCcceEEEECCHHHHHHHHHHHHHHHHhHh
Confidence 356889999999999999999999999999999999954 4556678999999999999999999999998753
No 16
>d1rgoa2 g.66.1.1 (A:187-220) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=3.4e-15 Score=89.33 Aligned_cols=30 Identities=50% Similarity=1.101 Sum_probs=28.4
Q ss_pred cccccccCcccc-CCcCCCCCCCccccCccc
Q 027432 188 SNFKTKLCGNFA-KGSCTFGDRCHFAHGAAE 217 (223)
Q Consensus 188 ~~~kt~~C~~~~-~g~C~~g~~C~faH~~~e 217 (223)
.+|||+||++|. .|.|+||++|+||||++|
T Consensus 4 pkyKT~lC~~f~~~g~C~yG~~C~FaHg~~E 34 (34)
T d1rgoa2 4 PKYKTELCRTFHTIGFCPYGPRCHFIHNADE 34 (34)
T ss_dssp TTTTCSBCHHHHHHSCCTTGGGCSSBCCSCC
T ss_pred CCccchhccccCCCCcCCCCCcccCcCCCCC
Confidence 579999999998 699999999999999987
No 17
>d2ctea1 d.51.1.1 (A:8-88) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=1.4e-13 Score=97.73 Aligned_cols=75 Identities=21% Similarity=0.284 Sum_probs=65.8
Q ss_pred CCCCcceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhcC
Q 027432 93 SFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 169 (223)
Q Consensus 93 s~g~~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~~ 169 (223)
.+....+.++.||.+.+|.|||++|.+|++|+++||++|++.+. +...+.|+|+|+.+++++|+.+|.+++.+.+
T Consensus 5 ~~~~~~t~~i~Ip~~~~~~iIG~~G~~i~~I~~~tg~~I~~p~~--~~~~~~v~I~G~~~~v~~A~~~I~~iv~e~~ 79 (81)
T d2ctea1 5 RLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRP--DDPSNQIKITGTKEGIEKARHEVLLISAEQD 79 (81)
T ss_dssp CCCSCEEEEEECCTTTHHHHHCSSSCHHHHHHHHTTCCCBCCCT--TSSCCEEEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCceEEEEEECHHHHhhccCCCChhHHHHHHHhCCEEEECCC--CCCCCEEEEEeCHHHHHHHHHHHHHHHHHHh
Confidence 34456789999999999999999999999999999999999643 3346889999999999999999999998743
No 18
>d2ctma1 d.51.1.1 (A:8-88) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=3.3e-13 Score=95.68 Aligned_cols=73 Identities=16% Similarity=0.267 Sum_probs=63.8
Q ss_pred CCcceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhc
Q 027432 95 GASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 168 (223)
Q Consensus 95 g~~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~ 168 (223)
....+.++.||...++.|||++|++|++|+++||++|++.+... .+.+.|+|+|++++|++|+.+|.++++++
T Consensus 7 ~~~~t~~i~Vp~~~~~~iIG~~G~~i~~I~~~tg~~I~~p~~~~-~~~~~v~I~G~~~~V~~A~~~I~~i~~e~ 79 (81)
T d2ctma1 7 EQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGA-PDPNCVTVTGLPENVEEAIDHILNLEEEY 79 (81)
T ss_dssp TTCCCEEEECCTTTHHHHHCSSSCHHHHHHHHHTCEEECCCTTC-SCTTEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred hcCEEEEEEECHHHHhhccCCCCccHHHHHHHhCCEEEeCCccC-CCCCEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999965432 23568999999999999999999998874
No 19
>d2cpqa1 d.51.1.1 (A:212-289) Fragile X mental retardation syndrome related protein 1, FXR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=1.5e-13 Score=97.14 Aligned_cols=71 Identities=23% Similarity=0.248 Sum_probs=61.4
Q ss_pred CcceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcC-CHHHHHHHHHHHHhhhhhcCC
Q 027432 96 ASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG-SFEQIKQASAMVRELIVRIGP 170 (223)
Q Consensus 96 ~~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G-~~~~i~~A~~lI~~~i~~~~~ 170 (223)
...+.++.||.+++|.|||+||++|++|+++|||+|.+.+. .++.|+|.| +++++++|+.||..+....+.
T Consensus 6 ~~~t~~i~Ip~~~ig~vIG~gG~~I~~I~~~tGa~i~i~~~----~~g~v~I~g~~~eav~~A~~~Ie~~~~~~eV 77 (78)
T d2cpqa1 6 AAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDE----DTGTFRIYGESADAVKKARGFLEFVEDFIQV 77 (78)
T ss_dssp CSEEEEEECCHHHHHHHHTTTTHHHHHHHTSTTEEEEEEET----TTTEEEEEESSHHHHHHHHHHHSCCCCCCCC
T ss_pred CCceEEEEECHHHHHHHcCCChHHHHHHHHhcCcEEEEecC----CCceEEEEECCHHHHHHHHHHHHHhheeecC
Confidence 35688999999999999999999999999999999998653 246799999 799999999999877765543
No 20
>d2ctja1 d.51.1.1 (A:8-89) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=5.8e-13 Score=94.52 Aligned_cols=74 Identities=16% Similarity=0.262 Sum_probs=64.1
Q ss_pred CCcceEEEEeccccccceecCCCcchhhhhhh-cCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhcCC
Q 027432 95 GASATAKISVDASLAGAIIGKGGVNSKQICRQ-TGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGP 170 (223)
Q Consensus 95 g~~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~-SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~~~ 170 (223)
....+.+|.||...+|.|||++|++|++|+++ ++++|++.+. +..++.|+|+|+++++++|+.+|.+++.+.+.
T Consensus 7 ~~~~t~~i~Vp~~~~~~iIGk~G~~I~~I~~~~~~~~I~~~~~--~~~~~~v~I~G~~~~v~~A~~~I~~~v~e~~~ 81 (82)
T d2ctja1 7 ANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVE--GSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQT 81 (82)
T ss_dssp CSSCCEEEECCHHHHHHHHCSSSHHHHHHHHHHTSCEEECCCT--TTTCCEEEEESCHHHHHHHHHHHHHHHHHHSC
T ss_pred cCcEEEEEEECHHHHhhcCCCCCccHHHHHHHcCCcEEEEeCC--CCCCceEEEeCCHHHHHHHHHHHHHHHhhhhc
Confidence 34568999999999999999999999999987 5888888543 34568999999999999999999999987653
No 21
>d1viga_ d.51.1.1 (A:) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=5.5e-13 Score=92.31 Aligned_cols=67 Identities=25% Similarity=0.333 Sum_probs=60.2
Q ss_pred cceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhh
Q 027432 97 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELI 165 (223)
Q Consensus 97 ~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i 165 (223)
....++.||....+.|||++|++|++|+++||++|++.+. +..++.|+|.|+++++++|+.+|.+++
T Consensus 4 ~~~~ei~V~~~~~~~iIG~~G~~i~~I~~~tg~~I~i~~~--~~~~~~v~I~G~~~~v~~A~~~I~~i~ 70 (71)
T d1viga_ 4 MDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPD--SEKSNLIRIEGDPQGVQQAKRELLELA 70 (71)
T ss_dssp CEEEEEEECSSHHHHHTCSSCCHHHHHHHHTCCEEECCCC--CSSSEEEEEEESSHHHHHHHHHHHHTC
T ss_pred eEEEEEEECHHHhcccCCCCCchHHHHHHHhCCEEEeCCC--CCCCCEEEEECCHHHHHHHHHHHHHHh
Confidence 3567899999999999999999999999999999999643 345689999999999999999999875
No 22
>d2ba0a3 d.51.1.1 (A:136-219) Exosome complex RNA-binding protein 1, ECR1 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.30 E-value=1e-12 Score=94.09 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=59.1
Q ss_pred EEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhcCC
Q 027432 100 AKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGP 170 (223)
Q Consensus 100 ~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~~~ 170 (223)
..+.||.+++|.|||++|++|++|+++||++|+|.+ +..|+|+|++++++.|+.+|..++.+...
T Consensus 3 ~vi~Ip~~~ig~IIG~gG~~I~~I~~~tg~~I~i~~------~g~v~I~G~~e~v~~A~~~I~~i~~ea~~ 67 (84)
T d2ba0a3 3 RIVAINPARVPRVIGKKGSMIKLLKSELDVQIVVGQ------NGLIWVNGDRRKVSIAEEAIYLIEQEAHT 67 (84)
T ss_dssp EEEECCGGGHHHHHCGGGHHHHHHHHHHTCEEEECT------TSEEEEESCHHHHHHHHHHHHHHHHCSCC
T ss_pred EEEEEChhhcceeeCCcHHHHHHHHHHHCCEEEECC------CCEEEEEeCHHHHHHHHHHHHHHHHhccc
Confidence 468999999999999999999999999999999964 35799999999999999999999987553
No 23
>d2ctka1 d.51.1.1 (A:8-98) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=1.6e-12 Score=93.90 Aligned_cols=71 Identities=15% Similarity=0.240 Sum_probs=63.3
Q ss_pred cceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhcC
Q 027432 97 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIG 169 (223)
Q Consensus 97 ~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~~ 169 (223)
..+.+|.||.+.+|.|||++|.+|++|+++||++|.+.+. +..+..|+|+|+.++|+.|+.+|.+++.+.+
T Consensus 9 ~vt~~i~Vp~~~~~~iIG~~G~~i~~I~~~tg~~I~~p~~--~~~~~~v~I~G~~~~V~~A~~~I~~~v~e~~ 79 (91)
T d2ctka1 9 PVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAP--ELQSDIIAITGLAANLDRAKAGLLERVKELQ 79 (91)
T ss_dssp CEEEEEECCHHHHHHHHCSSSHHHHHHHHHTCCEEECCCT--TTTCCEEEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEECHHHHhHhcCCCchhHHHHHHHhCCEEEECCC--CCCcceEEEECCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999653 3346789999999999999999999997644
No 24
>d1tuaa1 d.51.1.1 (A:1-84) Hypothetical protein APE0754 {Aeropyrum pernix [TaxId: 56636]}
Probab=99.13 E-value=4.1e-12 Score=90.82 Aligned_cols=71 Identities=18% Similarity=0.257 Sum_probs=56.1
Q ss_pred EEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhcCC
Q 027432 100 AKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGP 170 (223)
Q Consensus 100 ~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~~~ 170 (223)
..+.||.+.+|.|||+||++||+|+++|||+|+|.+.......+.....+.+.++++|..+|.++...+++
T Consensus 5 i~i~ip~~~ig~vIG~gG~~Ik~i~~~tg~~I~Id~d~g~v~i~~~~~~~~~~a~~~a~~iI~aI~rGf~P 75 (84)
T d1tuaa1 5 IYVKVKPERLGAVIGPRGEVKAEIMRRTGTVITVDTENSMVIVEPEAEGIPPVNLMKAAEVVKAISLGFPP 75 (84)
T ss_dssp EEEECCGGGHHHHHCGGGHHHHHHHHHHTEEEEEETTTTEEEEEESSTTSCHHHHHHHHHHHHHHHHTCCH
T ss_pred EEEEeCHHHcCeeecCCchhHHHHHHHHCCEEEEEcCCCeEEEecCCccccHHHHHHHHHHHHHHhCCCCh
Confidence 56899999999999999999999999999999996433221122233466899999999999998765554
No 25
>d2ctfa1 d.51.1.1 (A:7-96) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=7.1e-11 Score=85.16 Aligned_cols=68 Identities=22% Similarity=0.343 Sum_probs=61.0
Q ss_pred CcceEEEEeccccccceecCCCcchhhhhhh-cCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhc
Q 027432 96 ASATAKISVDASLAGAIIGKGGVNSKQICRQ-TGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRI 168 (223)
Q Consensus 96 ~~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~-SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~ 168 (223)
...|..+.||....+.|||++|++|++|+++ ++++|++.+. ...|+|+|++++|++|+.+|.+++.+.
T Consensus 19 ~~~t~~v~VP~~~h~~iIG~~G~~I~~i~~~~~~v~I~~~~~-----~~~v~i~G~~~~ve~Ak~~I~~iv~el 87 (90)
T d2ctfa1 19 SFTVSSVAAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEG-----EDKITLEGPTEDVSVAQEQIEGMVKDL 87 (90)
T ss_dssp CCEEEEEECCSTTHHHHHTTTTCHHHHHHHHCSSSEEEECSS-----SCEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEcCHHHHhhcCCCCchhHHHHHHHcCCcEEeeCCC-----CceEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999 4899999642 367999999999999999999999875
No 26
>d2je6i3 d.51.1.1 (I:153-221) Exosome complex RNA-binding protein 1, ECR1 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.99 E-value=1.1e-11 Score=85.43 Aligned_cols=64 Identities=11% Similarity=0.053 Sum_probs=50.2
Q ss_pred EEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCC-HHHHHHHHHHHHhhhhhcC
Q 027432 100 AKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGS-FEQIKQASAMVRELIVRIG 169 (223)
Q Consensus 100 ~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~-~~~i~~A~~lI~~~i~~~~ 169 (223)
..+.||.+++|.|||++|++||.|+++||++|+|.+ +..|+|+|. .+.++.|..+|..+.++..
T Consensus 3 ~vi~Ip~~~ig~iIGkgG~~Ik~i~~~tg~~I~i~~------~g~v~I~g~~~~~v~~A~~~I~~i~~ea~ 67 (69)
T d2je6i3 3 IVIDIMPVKVPRVIGKNKSMYETLTSKSGCSIFVAN------NGRIWATCPSRFSEEILIEAIRKIENESH 67 (69)
T ss_dssp CEEECCGGGHHHHHCGGGHHHHHHHTTC---CEECT------TSEEEC-----CTTCCTHHHHTTTTTTTT
T ss_pred EEEEEChhhccceECCchhHHHHHHHHHCCEEEEcC------CCEEEEEeCCHHHHHHHHHHHHHHHHhhc
Confidence 357899999999999999999999999999999954 246999995 7899999999998887754
No 27
>d2z0sa2 d.51.1.1 (A:148-234) Exosome complex RNA-binding protein 1, ECR1 {Aeropyrum pernix [TaxId: 56636]}
Probab=98.88 E-value=1.2e-09 Score=78.17 Aligned_cols=65 Identities=14% Similarity=0.105 Sum_probs=57.7
Q ss_pred EEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcC-CHHHHHHHHHHHHhhhhhcCC
Q 027432 100 AKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG-SFEQIKQASAMVRELIVRIGP 170 (223)
Q Consensus 100 ~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G-~~~~i~~A~~lI~~~i~~~~~ 170 (223)
..+.||.+++|.|||+||++|+.|+++||++|.|.+. ..|.|.| +.+.+..|..+|..+..+...
T Consensus 3 ~vi~I~~~ki~~vIG~gG~~ik~i~~~t~~~I~I~d~------G~V~I~g~~~~~~~~A~~~I~~I~~ea~v 68 (87)
T d2z0sa2 3 KIVEISPAKVPRVIGRKMSMLKTLEEKTECKIFVARN------GRIHLECPNEDLEAIAVMAIKIIDEEAYT 68 (87)
T ss_dssp EEEECCGGGSGGGTCGGGHHHHHHHHHHCCEEEEETT------TEEEEECSCHHHHHHHHHHHHHHHHCSCC
T ss_pred EEEEEChhhcceeECCCCcHHHHHHHHHCCEEEECCC------cEEEEEeCCHHHHHHHHHHHHHHHHhchh
Confidence 4688999999999999999999999999999999652 3699999 589999999999999887553
No 28
>d1e3ha4 d.52.3.1 (A:579-632) Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6 {Streptomyces antibioticus [TaxId: 1890]}
Probab=98.72 E-value=4.9e-10 Score=73.36 Aligned_cols=45 Identities=24% Similarity=0.341 Sum_probs=13.8
Q ss_pred eEEEEeccccccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcC
Q 027432 99 TAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEG 149 (223)
Q Consensus 99 t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G 149 (223)
..++.||.+++|.|||+||.+||+|+++||++|+|.+ +..|+|+|
T Consensus 4 ~~~i~Ip~~kig~vIG~GG~~Ik~I~~~tga~I~i~d------dg~v~I~a 48 (54)
T d1e3ha4 4 IITVKIPVDKIGEVIGPKRQMINQIQEDTGAEITIED------DGTIYIGA 48 (54)
T ss_dssp CC---------------------CHHHHSCCCC--------------CCCC
T ss_pred EEEEEeCHHHeeEEECCccHHHHHHHHHHCCEEEEeC------CeEEEEEe
Confidence 4578999999999999999999999999999999964 35677776
No 29
>d1tuaa2 d.51.1.1 (A:85-188) Hypothetical protein APE0754 {Aeropyrum pernix [TaxId: 56636]}
Probab=98.65 E-value=5.1e-09 Score=77.20 Aligned_cols=56 Identities=21% Similarity=0.366 Sum_probs=49.8
Q ss_pred cccceecCCCcchhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhhhhhcCC
Q 027432 108 LAGAIIGKGGVNSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRELIVRIGP 170 (223)
Q Consensus 108 ~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~~~ 170 (223)
+.|.|||+||.+|+.|++.|||+|.|.+ ..|.|.|++++++.|+.+|.+++...+.
T Consensus 23 ~~GrIIG~gGktik~Ie~~Tg~~I~I~d-------~~v~iig~~e~i~~A~~~Ie~li~~~e~ 78 (104)
T d1tuaa2 23 IKGRIIGEGGRARRTIEEMTDTYINVGE-------YEVAIIGDYERAMAAKQAIEMLAEGRMH 78 (104)
T ss_dssp HHHHHHCGGGHHHHHHHHHHTCEEEECS-------SEEEEEEEHHHHHHHHHHHHHHHTTCCH
T ss_pred HhcceeCCCcHHHHHHHHHHCCeEEEeC-------CeEEEEECchhHHHHHHHHHHHHcCCCc
Confidence 4799999999999999999999999964 2477889999999999999999987554
No 30
>d1k1ga_ d.51.1.1 (A:) RNA splicing factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.24 E-value=1.1e-06 Score=66.22 Aligned_cols=71 Identities=23% Similarity=0.368 Sum_probs=54.0
Q ss_pred ceEEEEecccc------ccceecCCCcchhhhhhhcCCeEEeccC-C--------CC------CCc-eEEEEcC-CHHHH
Q 027432 98 ATAKISVDASL------AGAIIGKGGVNSKQICRQTGAKLSIRDH-E--------AD------PNL-RNIELEG-SFEQI 154 (223)
Q Consensus 98 ~t~~i~VP~~~------vG~IIGkgG~~Ik~I~~~SGa~I~I~~~-~--------~~------~~~-r~v~I~G-~~~~i 154 (223)
.+.+|+||.+. ||.|||.+|.++|+|+++|||+|.|.-. + .+ ..+ =-|.|++ +++.+
T Consensus 3 ~~~Ki~iP~~~~P~fNfvG~IlGPrG~t~K~Le~eTgckI~IrGrGS~kd~~~~~~~~~~~~~~~epLHv~I~a~~~~~~ 82 (122)
T d1k1ga_ 3 VSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENV 82 (122)
T ss_dssp EEEEEECCTTTCCSHHHHHHHHCSSSHHHHHHHHHSCCEEEEEESTTSSSSSSSSCCCCCSCCSSCCEEEEEEESSHHHH
T ss_pred eeEEEecCCccCCCCCeeeeEeCCCCchHHHHHHHHCCEEEEEecCCcccccccccCCCCCCCCCCCceEEEecCChhhH
Confidence 46789999764 9999999999999999999999999421 0 00 011 1244444 68999
Q ss_pred HHHHHHHHhhhhhc
Q 027432 155 KQASAMVRELIVRI 168 (223)
Q Consensus 155 ~~A~~lI~~~i~~~ 168 (223)
+.|+.+|.++|...
T Consensus 83 ~~A~~~i~~ll~~~ 96 (122)
T d1k1ga_ 83 KKAVEQIRNILKQG 96 (122)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999753
No 31
>d2cqea2 g.66.1.1 (A:429-457) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.97 E-value=1.7e-06 Score=47.92 Aligned_cols=26 Identities=23% Similarity=0.620 Sum_probs=23.4
Q ss_pred cccccCcccccccCCCCCCCCCCcccc
Q 027432 28 VKSRMCNRLNSAEGCKFGDKCHFAHGE 54 (223)
Q Consensus 28 ~kt~~C~~~~~~g~C~~g~~C~faH~~ 54 (223)
.|.+||++|.+ |.|..|++|.|.|++
T Consensus 4 kkkelCKfYvq-GyCtrgenC~ymH~e 29 (29)
T d2cqea2 4 KKRELCKFYIT-GFCARAENCPYMHGD 29 (29)
T ss_dssp CCCSBCTTTTT-TCCSCSTTCSSBSSS
T ss_pred hhhhhhhhhee-eeecCCcCcccccCC
Confidence 47899998888 899999999999974
No 32
>d2cqea2 g.66.1.1 (A:429-457) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.80 E-value=4.8e-06 Score=46.06 Aligned_cols=25 Identities=32% Similarity=0.842 Sum_probs=23.3
Q ss_pred ccccCccccCCcCCCCCCCccccCc
Q 027432 191 KTKLCGNFAKGSCTFGDRCHFAHGA 215 (223)
Q Consensus 191 kt~~C~~~~~g~C~~g~~C~faH~~ 215 (223)
|.+||++|..|.|..|++|.|-|.+
T Consensus 5 kkelCKfYvqGyCtrgenC~ymH~e 29 (29)
T d2cqea2 5 KRELCKFYITGFCARAENCPYMHGD 29 (29)
T ss_dssp CCSBCTTTTTTCCSCSTTCSSBSSS
T ss_pred hhhhhhhheeeeecCCcCcccccCC
Confidence 6789999999999999999999974
No 33
>d2bl5a1 d.51.1.1 (A:1-134) Quaking protein A (Xqua) {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=97.67 E-value=1.8e-05 Score=60.12 Aligned_cols=69 Identities=26% Similarity=0.417 Sum_probs=49.6
Q ss_pred eEEEEecc------ccccceecCCCcchhhhhhhcCCeEEeccCCC-----------------CCCc-eEEEEcC--CH-
Q 027432 99 TAKISVDA------SLAGAIIGKGGVNSKQICRQTGAKLSIRDHEA-----------------DPNL-RNIELEG--SF- 151 (223)
Q Consensus 99 t~~i~VP~------~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~~~-----------------~~~~-r~v~I~G--~~- 151 (223)
+.+|+||. +++|.|||.+|.++|+|+++|||+|.|.-..+ ...+ ==|.|++ ..
T Consensus 3 ~eKv~IP~~~~P~~NfvG~IiGPrG~t~K~le~eTg~kI~IrGrGS~k~~~~~~~~~~~~~~~~~~epLHv~I~a~~~~~ 82 (134)
T d2bl5a1 3 QEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQN 82 (134)
T ss_dssp EEEEECCTTTCSSSCHHHHHTTTTHHHHHHHHHHHSEEEEEESTTSSCCHHHHHTSTTSHHHHTTTSCCEEEEEECSCCH
T ss_pred ceEEeCCCCCCCCCCeeEEEECCCCchHHHHHHHHCCEEEEEecCCCcCccccccccCCCCCcCCCCCCEEEEEecCcHH
Confidence 56788885 57899999999999999999999999942211 0111 1234444 22
Q ss_pred ---HHHHHHHHHHHhhhhh
Q 027432 152 ---EQIKQASAMVRELIVR 167 (223)
Q Consensus 152 ---~~i~~A~~lI~~~i~~ 167 (223)
..++.|..+|..+|..
T Consensus 83 ~a~~kl~~A~~~I~~lL~p 101 (134)
T d2bl5a1 83 RAELKLKRAVEEVKKLLVP 101 (134)
T ss_dssp HHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 3588999999998854
No 34
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.84 E-value=0.00015 Score=46.43 Aligned_cols=22 Identities=32% Similarity=0.804 Sum_probs=20.7
Q ss_pred cCcccccccCCCCCCCCCCccc
Q 027432 32 MCNRLNSAEGCKFGDKCHFAHG 53 (223)
Q Consensus 32 ~C~~~~~~g~C~~g~~C~faH~ 53 (223)
+|++|.+++.|--||+|.|.|.
T Consensus 2 PCK~yHtg~kCy~gd~C~FSH~ 23 (56)
T d2cqea1 2 PCKLYHTTGNCINGDDCMFSHD 23 (56)
T ss_dssp BCSHHHHTSCCSSCTTCSSBCC
T ss_pred CcceeecCCcccCCCcccccCC
Confidence 6999999999999999999993
No 35
>d2asba3 d.52.3.1 (A:263-329) Transcription factor NusA, C-terminal domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.02 E-value=0.0015 Score=43.50 Aligned_cols=38 Identities=32% Similarity=0.445 Sum_probs=35.3
Q ss_pred cceEEEEeccccccceecCCCcchhhhhhhcCCeEEec
Q 027432 97 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIR 134 (223)
Q Consensus 97 ~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~ 134 (223)
.....+.||.+..+..|||+|.|++-..+-||-+|.|.
T Consensus 25 ~~~~~v~V~~~qls~AIGk~G~NvrLas~Ltg~~IdI~ 62 (67)
T d2asba3 25 ARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIR 62 (67)
T ss_dssp TTEEEEEECGGGHHHHHCGGGHHHHHHHHHHSCEEEEE
T ss_pred CcEEEEEECcccccchhcCCceeHHHHHHHHCCEEEEE
Confidence 45688999999999999999999999999999999994
No 36
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.27 E-value=0.0027 Score=40.40 Aligned_cols=21 Identities=33% Similarity=0.833 Sum_probs=18.5
Q ss_pred cCccccCC-cCCCCCCCccccC
Q 027432 194 LCGNFAKG-SCTFGDRCHFAHG 214 (223)
Q Consensus 194 ~C~~~~~g-~C~~g~~C~faH~ 214 (223)
.|++|..| .|..|++|+|.|.
T Consensus 2 PCK~yHtg~kCy~gd~C~FSH~ 23 (56)
T d2cqea1 2 PCKLYHTTGNCINGDDCMFSHD 23 (56)
T ss_dssp BCSHHHHTSCCSSCTTCSSBCC
T ss_pred CcceeecCCcccCCCcccccCC
Confidence 59999955 7999999999994
No 37
>d1hh2p3 d.52.3.1 (P:277-344) Transcription factor NusA, C-terminal domains {Thermotoga maritima [TaxId: 2336]}
Probab=95.22 E-value=0.004 Score=41.43 Aligned_cols=40 Identities=30% Similarity=0.463 Sum_probs=36.2
Q ss_pred cceEEEEeccccccceecCCCcchhhhhhhcCCeEEeccC
Q 027432 97 SATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDH 136 (223)
Q Consensus 97 ~~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~SGa~I~I~~~ 136 (223)
.....+.||.+..+..|||+|.|++-..+-+|.+|.|.+.
T Consensus 26 ~~~~~v~V~~~qls~AIGk~G~NvrLas~Ltg~~idI~s~ 65 (68)
T d1hh2p3 26 NKAARVLVPPTQLSLAIGKGGQNARLAAKLTGWKIDIKPI 65 (68)
T ss_dssp TTEEEEEECTTSHHHHHCGGGHHHHHHHHHHSCEEEEEEC
T ss_pred CCEEEEEECcccccccccCCcchHHHHHHHHCCEEeeEEc
Confidence 4568899999999999999999999999999999999643
No 38
>d2fc6a1 g.66.1.1 (A:8-44) Target of EGR1 protein 1, TOE1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.32 E-value=0.0052 Score=35.42 Aligned_cols=27 Identities=19% Similarity=0.565 Sum_probs=24.6
Q ss_pred ccccccCcccccccCCCCCCCCCCccc
Q 027432 27 VVKSRMCNRLNSAEGCKFGDKCHFAHG 53 (223)
Q Consensus 27 ~~kt~~C~~~~~~g~C~~g~~C~faH~ 53 (223)
.-+|.+|..|...|.||.|.+|.-.|.
T Consensus 10 ~~~~~iC~~FsAyGWCP~G~qCp~SHd 36 (37)
T d2fc6a1 10 PHPTSICDNFSAYGWCPLGPQCPQSHD 36 (37)
T ss_dssp CCCSCBCSHHHHTCCCTTGGGCSSBCC
T ss_pred CCccchhhhhhhccccCCCCCCcccCc
Confidence 457889999999999999999999985
No 39
>d1wh9a_ d.52.3.1 (A:) Ribosomal protein S3 N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.03 E-value=0.083 Score=36.73 Aligned_cols=29 Identities=14% Similarity=0.287 Sum_probs=25.9
Q ss_pred ceEEEEeccccccceecCCCcchhhhhhh
Q 027432 98 ATAKISVDASLAGAIIGKGGVNSKQICRQ 126 (223)
Q Consensus 98 ~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~ 126 (223)
..++|.|-...-|.|||++|.+|++|++.
T Consensus 35 ~~i~I~I~tarPGivIGrkG~~I~~L~~~ 63 (92)
T d1wh9a_ 35 TRTEIIILATRTQNVLGEKGRRIRELTAV 63 (92)
T ss_dssp SCEEEEEEESCHHHHHCGGGHHHHHHHHH
T ss_pred CeEEEEEEeCCCceeeccCchhHHHHHHH
Confidence 45789999999999999999999998864
No 40
>d2fc6a1 g.66.1.1 (A:8-44) Target of EGR1 protein 1, TOE1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.84 E-value=0.17 Score=28.87 Aligned_cols=26 Identities=35% Similarity=0.827 Sum_probs=22.8
Q ss_pred ccccccCcccc-CCcCCCCCCCccccC
Q 027432 189 NFKTKLCGNFA-KGSCTFGDRCHFAHG 214 (223)
Q Consensus 189 ~~kt~~C~~~~-~g~C~~g~~C~faH~ 214 (223)
--+|.+|+.|. -|-|+.|..|.-.|.
T Consensus 10 ~~~~~iC~~FsAyGWCP~G~qCp~SHd 36 (37)
T d2fc6a1 10 PHPTSICDNFSAYGWCPLGPQCPQSHD 36 (37)
T ss_dssp CCCSCBCSHHHHTCCCTTGGGCSSBCC
T ss_pred CCccchhhhhhhccccCCCCCCcccCc
Confidence 44788999999 799999999998885
No 41
>d2uubc1 d.52.3.1 (C:2-106) Ribosomal protein S3 N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=80.71 E-value=0.18 Score=35.61 Aligned_cols=29 Identities=21% Similarity=0.512 Sum_probs=25.5
Q ss_pred ceEEEEeccccccceecCCCcchhhhhhh
Q 027432 98 ATAKISVDASLAGAIIGKGGVNSKQICRQ 126 (223)
Q Consensus 98 ~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~ 126 (223)
..++|.|-+..-|+|||++|++|+.|+++
T Consensus 61 ~~i~I~I~tarPG~iIGkkG~~i~~L~~~ 89 (105)
T d2uubc1 61 DNVAVTVHVAKPGVVIGRGGERIRVLREE 89 (105)
T ss_dssp SCEECCEEESCHHHHHCSTTSHHHHHHHH
T ss_pred CcEEEEEEECCCceEEcCCchhHHHHHHH
Confidence 45788889999999999999999988875
No 42
>d1egaa2 d.52.3.1 (A:183-295) GTPase Era C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=74.51 E-value=0.29 Score=34.95 Aligned_cols=30 Identities=23% Similarity=0.294 Sum_probs=23.3
Q ss_pred ceEEEEecc-ccccceecCCCcchhhhhhhc
Q 027432 98 ATAKISVDA-SLAGAIIGKGGVNSKQICRQT 127 (223)
Q Consensus 98 ~t~~i~VP~-~~vG~IIGkgG~~Ik~I~~~S 127 (223)
....|.|.. +.-+.|||++|++||+|...+
T Consensus 49 I~a~I~V~~~sqk~IiIGk~G~~ik~I~~~a 79 (113)
T d1egaa2 49 INGLILVEREGQKKMVIGNKGAKIKTIGIEA 79 (113)
T ss_dssp EEEEEEESSHHHHHHHHCGGGHHHHHHHHHH
T ss_pred EEEEEEECCcchhhhhhcccchHHHHHHHHH
Confidence 345677776 455899999999999987754
No 43
>d2ja9a2 d.51.1.1 (A:152-236) Ribosomal RNA-processing protein 40, RRP40 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=68.02 E-value=4.9 Score=26.74 Aligned_cols=62 Identities=13% Similarity=0.089 Sum_probs=46.2
Q ss_pred EEEEeccccccceecCCCc-chhhhhhhcCCeEEeccCCCCCCceEEEEcC-CHHHHHHHHHHHHhhhhh
Q 027432 100 AKISVDASLAGAIIGKGGV-NSKQICRQTGAKLSIRDHEADPNLRNIELEG-SFEQIKQASAMVRELIVR 167 (223)
Q Consensus 100 ~~i~VP~~~vG~IIGkgG~-~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G-~~~~i~~A~~lI~~~i~~ 167 (223)
.-+.|+..++..|||+.+. -++.|.+.++..|.|..+ -| |=|.| +.+....+...|..+-.+
T Consensus 3 ~v~~vs~~~~rrll~~~~~~ml~~l~~~~~~eI~VG~N-----Gr-IWi~~~~~~~~i~i~~aI~~~e~~ 66 (85)
T d2ja9a2 3 MIIDVNLNFARQLLFNNDFPLLKVLAAHTKFEVAIGLN-----GK-IWVKCEELSNTLACYRTIMECCQK 66 (85)
T ss_dssp EEEECCHHHHHHHHHCTTCCHHHHHHTTCCCEEEEETT-----TE-EEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEecHHHHHHHHcCCCChHHHHHHhhcCceEEEecC-----cE-EEEECCCHHHHHHHHHHHHHHHHh
Confidence 3567899999999999998 678899999999999542 24 45555 677776666666655444
No 44
>d1wf3a2 d.52.3.1 (A:181-298) GTPase Era C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=65.80 E-value=0.58 Score=33.58 Aligned_cols=29 Identities=34% Similarity=0.489 Sum_probs=22.2
Q ss_pred eEEEEecc-ccccceecCCCcchhhhhhhc
Q 027432 99 TAKISVDA-SLAGAIIGKGGVNSKQICRQT 127 (223)
Q Consensus 99 t~~i~VP~-~~vG~IIGkgG~~Ik~I~~~S 127 (223)
...|.|+. +.-+.|||++|+.||+|..++
T Consensus 51 ~~~I~V~~~sqK~IiIGk~G~~ik~Ig~~a 80 (118)
T d1wf3a2 51 KAILYVERPSQKAIVIGEGGRKIKEIGQAT 80 (118)
T ss_dssp EEEEEESSHHHHHHHHCGGGHHHHHHHHHH
T ss_pred EEEEEeCccchhhhhhccCchhHHHHHHHH
Confidence 34567776 455889999999999887643
No 45
>d2qalc1 d.52.3.1 (C:1-105) Ribosomal protein S3 N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=64.25 E-value=0.54 Score=33.08 Aligned_cols=29 Identities=17% Similarity=0.494 Sum_probs=24.5
Q ss_pred ceEEEEeccccccceecCCCcchhhhhhh
Q 027432 98 ATAKISVDASLAGAIIGKGGVNSKQICRQ 126 (223)
Q Consensus 98 ~t~~i~VP~~~vG~IIGkgG~~Ik~I~~~ 126 (223)
..+++.|-...-|.|||+.|+.|.+|++.
T Consensus 61 ~~i~V~I~tarPGviIG~~G~~i~~L~~~ 89 (105)
T d2qalc1 61 KSIRVTIHTARPGIVIGKKGEDVEKLRKV 89 (105)
T ss_dssp SCBCCEEEESCHHHHHCTTSHHHHHHHHH
T ss_pred CcEEEEEEeCCCccEeccCcccHHHHHHH
Confidence 34678888899999999999999988764
No 46
>d2asba2 d.52.3.1 (A:184-262) Transcription factor NusA, C-terminal domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=63.90 E-value=0.76 Score=30.73 Aligned_cols=27 Identities=30% Similarity=0.507 Sum_probs=22.5
Q ss_pred ccccceecCCCcchhhhhhhc-CCeEEe
Q 027432 107 SLAGAIIGKGGVNSKQICRQT-GAKLSI 133 (223)
Q Consensus 107 ~~vG~IIGkgG~~Ik~I~~~S-Ga~I~I 133 (223)
+-+|++||.+|++|+.|.++. |-+|.|
T Consensus 47 DpvGacvG~~GsRI~~I~~eL~gEkIDi 74 (79)
T d2asba2 47 NAKGACIGPMGQRVRNVMSELSGEKIDI 74 (79)
T ss_dssp CHHHHHHCGGGHHHHHHHHHTTTCEEEE
T ss_pred CceeEEECCCccHHHHHHHHhCCceEEE
Confidence 568999999999999998764 667766
No 47
>d1hh2p2 d.52.3.1 (P:199-276) Transcription factor NusA, C-terminal domains {Thermotoga maritima [TaxId: 2336]}
Probab=63.40 E-value=1.3 Score=29.44 Aligned_cols=27 Identities=37% Similarity=0.637 Sum_probs=22.3
Q ss_pred ccccceecCCCcchhhhhhh-cCCeEEe
Q 027432 107 SLAGAIIGKGGVNSKQICRQ-TGAKLSI 133 (223)
Q Consensus 107 ~~vG~IIGkgG~~Ik~I~~~-SGa~I~I 133 (223)
+-+|++||..|++|+.|.++ .|.+|.|
T Consensus 47 DpvGacVG~~G~RI~~I~~eL~gEkIDi 74 (78)
T d1hh2p2 47 DPIGACIGEGGSRIAAILKELKGEKLDV 74 (78)
T ss_dssp CHHHHHHCTTSTTHHHHHHHTTTCEEEE
T ss_pred CeeEEEECCCchHHHHHHHHhCCceeEE
Confidence 56899999999999999876 4667765
No 48
>d1ansa_ g.11.1.1 (A:) Neurotoxin III (ATX III) {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=40.23 E-value=5.3 Score=20.37 Aligned_cols=10 Identities=40% Similarity=1.262 Sum_probs=8.7
Q ss_pred cCCCCCCCCC
Q 027432 40 EGCKFGDKCH 49 (223)
Q Consensus 40 g~C~~g~~C~ 49 (223)
|.|++|.+|-
T Consensus 9 ggcpwgqncy 18 (27)
T d1ansa_ 9 GGCPWGQNCY 18 (27)
T ss_dssp TTCSSSCSSC
T ss_pred cCCccccccc
Confidence 7899999993
No 49
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]}
Probab=32.38 E-value=13 Score=23.38 Aligned_cols=50 Identities=22% Similarity=0.386 Sum_probs=34.2
Q ss_pred ceecCCCcchhhhhhhc--CCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHh
Q 027432 111 AIIGKGGVNSKQICRQT--GAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVRE 163 (223)
Q Consensus 111 ~IIGkgG~~Ik~I~~~S--Ga~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~ 163 (223)
+|||-.-+.+.+|.++. +..|.|-+-+ ....++|+|+.+.++.+..++.+
T Consensus 7 AVlg~~~~~v~~i~~~~~~~~~v~iAN~N---sp~Q~VISG~~~ai~~~~~~~k~ 58 (70)
T d1mlaa2 7 AIIGLDDASIAKACEEAAEGQVVSPVNFN---SPGQVVIAGHKEAVERAGAACKA 58 (70)
T ss_dssp EEESCCHHHHHHHHHHHCTTSCEEEEEEE---ETTEEEEEEEHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHHhcCCCEEEEEecC---CCcceeeeCCHHHHHHHHHHHHH
Confidence 46666666777777654 3346664321 23579999999999988887765
No 50
>d1o4ua2 d.41.2.1 (A:1-103) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=24.91 E-value=34 Score=22.56 Aligned_cols=50 Identities=12% Similarity=0.089 Sum_probs=38.3
Q ss_pred chhhhhhhcCCeEEeccCCC---CCCceEEEEcCCHHHHHHHHHHHHhhhhhc
Q 027432 119 NSKQICRQTGAKLSIRDHEA---DPNLRNIELEGSFEQIKQASAMVRELIVRI 168 (223)
Q Consensus 119 ~Ik~I~~~SGa~I~I~~~~~---~~~~r~v~I~G~~~~i~~A~~lI~~~i~~~ 168 (223)
-++.+-+..+.++...-.+. ..++.+++|.|+...+-.+...+++++...
T Consensus 49 ~~~~if~~~~~~v~~~~~dG~~v~~g~~I~~i~G~a~~iL~~ER~~LN~Lq~l 101 (103)
T d1o4ua2 49 VSRMFLEKMGLLSKFNVEDGEYLEGTGVIGEIEGNTYKLLVAERTLLNVLSVM 101 (103)
T ss_dssp HHHHHHHHTTCEEEESCCTTCEEESCEEEEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccceeeecCCCCEEEcCceEEEEeccHHHHHHHHHHHHHHHHHh
Confidence 45667778888877743222 256799999999999999999999988653
No 51
>d2f1fa2 d.58.18.6 (A:78-163) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=20.47 E-value=73 Score=20.37 Aligned_cols=42 Identities=17% Similarity=0.254 Sum_probs=32.2
Q ss_pred chhhhhhhcCCeEEeccCCCCCCceEEEEcCCHHHHHHHHHHHHhh
Q 027432 119 NSKQICRQTGAKLSIRDHEADPNLRNIELEGSFEQIKQASAMVREL 164 (223)
Q Consensus 119 ~Ik~I~~~SGa~I~I~~~~~~~~~r~v~I~G~~~~i~~A~~lI~~~ 164 (223)
.|.+|.+..+++|--.. ...-+|+++|+++.++....++..+
T Consensus 23 ~i~~i~~~f~a~ivd~~----~~~~iie~tG~~~~id~fi~~l~~~ 64 (86)
T d2f1fa2 23 EVKRNTEIFRGQIIDVT----PSLYTVQLAGTSGKLDAFLASIRDV 64 (86)
T ss_dssp HHHHHHHHTTCEEEEEC----SSEEEEEEEECHHHHHHHHHHHTTT
T ss_pred HHHHHHHhcCeEEEEcc----CCEEEEEEeCCHHHHHHHHHHhhcc
Confidence 46677788899875432 2347899999999999999888764
Done!