BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027437
(223 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|17380185|sp|O82531.1|PSB1_PETHY RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3608485|gb|AAC35983.1| proteasome beta subunit [Petunia x hybrida]
Length = 223
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/223 (90%), Positives = 214/223 (95%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ WSPYDNNGGTCVA+AGADYCV AADTRMSTGY+IL+RDYSKIIKLADKCVMAS
Sbjct: 1 MTKQQANWSPYDNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADV+ALQK+LA+RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD
Sbjct: 61 SGFQADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE
Sbjct: 121 SEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+DLVKTCFASATERDIYT ++LEIV+LN GI RE MELRKD
Sbjct: 181 AIDLVKTCFASATERDIYTGDRLEIVILNASGIRREEMELRKD 223
>gi|356526807|ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-like [Glycine max]
Length = 223
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/223 (90%), Positives = 214/223 (95%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQH WSPYDNNGG+CVAIAGADYCV AADTRMSTGY+IL+RDYSKI +LA+KCVMAS
Sbjct: 1 MTKQHANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L+ARHLIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD
Sbjct: 61 SGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
NEGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE
Sbjct: 121 NEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVKT FASATERDIYT +K+EIV+LN GIHREYM+LRKD
Sbjct: 181 AVDLVKTVFASATERDIYTGDKVEIVILNASGIHREYMDLRKD 223
>gi|351734454|ref|NP_001238324.1| uncharacterized protein LOC100306148 [Glycine max]
gi|255627685|gb|ACU14187.1| unknown [Glycine max]
Length = 223
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/223 (89%), Positives = 212/223 (95%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ WSPYDNNGG+CVAIAGADYCV AADTRMSTGY+IL+RDYSKI +LA+KCVMAS
Sbjct: 1 MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISRLAEKCVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L+ARHLIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD
Sbjct: 61 SGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
NEGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE
Sbjct: 121 NEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVKT FASATERDIYT +K+EIVVLN GI REYM+L+KD
Sbjct: 181 AVDLVKTVFASATERDIYTGDKVEIVVLNASGIRREYMDLKKD 223
>gi|388505884|gb|AFK41008.1| unknown [Lotus japonicus]
Length = 223
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/223 (89%), Positives = 211/223 (94%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQH WSPYDNNGG+CVAIAGADYCV AADTRMSTGY+IL+R+YSKI +LA+K VMAS
Sbjct: 1 MTKQHANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKISQLAEKSVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L+ARHLIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYYSFNVLGGLD
Sbjct: 61 SGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE E
Sbjct: 121 SEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSETE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVKT FASATERDIYT +KLEIV+LN GI REYMELRKD
Sbjct: 181 AVDLVKTVFASATERDIYTGDKLEIVILNASGIRREYMELRKD 223
>gi|357454307|ref|XP_003597434.1| Proteasome subunit beta type [Medicago truncatula]
gi|355486482|gb|AES67685.1| Proteasome subunit beta type [Medicago truncatula]
Length = 231
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/223 (88%), Positives = 212/223 (95%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQH WSPYDNNGG+CVAIAG+DYCV AADTRMSTGY+IL+RDYSKI LA+KCVMAS
Sbjct: 9 MTKQHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMAS 68
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L+ARHL YQHQHNKQMSCPAM QLLSNTLYYKRFFPYYSFNVLGGLD
Sbjct: 69 SGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLD 128
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE
Sbjct: 129 SEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 188
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVKT FASATERDIYT +K+EIV+LN GIHRE+M+LRKD
Sbjct: 189 AVDLVKTVFASATERDIYTGDKVEIVILNAGGIHREFMDLRKD 231
>gi|388496148|gb|AFK36140.1| unknown [Medicago truncatula]
Length = 237
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/222 (88%), Positives = 211/222 (95%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQH WSPYDNNGG+CVAIAG+DYCV AADTRMSTGY+IL+RDYSKI LA+KCVMAS
Sbjct: 1 MTKQHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L+ARHL YQHQHNKQMSCPAM QLLSNTLYYKRFFPYYSFNVLGGLD
Sbjct: 61 SGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE
Sbjct: 121 SEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRK 222
AVDLVKT FASATERDIYT +K+EIV+LN GIHRE+M+LRK
Sbjct: 181 AVDLVKTVFASATERDIYTGDKVEIVILNAGGIHREFMDLRK 222
>gi|357492211|ref|XP_003616394.1| Proteasome subunit beta type [Medicago truncatula]
gi|355517729|gb|AES99352.1| Proteasome subunit beta type [Medicago truncatula]
Length = 223
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/223 (87%), Positives = 211/223 (94%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQH WSPYDNNGG+CVAIAG+DYCV AADTRMSTGY+IL+RDYSKI LA+KCVMAS
Sbjct: 1 MTKQHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L+ARHL YQHQHNKQMSCPAM QLLSNTLYYKRFFPYYSFNVLGGLD
Sbjct: 61 SGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE E
Sbjct: 121 SEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSETE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVKT FASATERDIYT +K+EIV+LN GIHR++M+LRKD
Sbjct: 181 AVDLVKTVFASATERDIYTGDKVEIVILNASGIHRDFMDLRKD 223
>gi|225453909|ref|XP_002279266.1| PREDICTED: proteasome subunit beta type-1 [Vitis vinifera]
gi|296089152|emb|CBI38855.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/223 (89%), Positives = 209/223 (93%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ WSPYDNNGG+CVAIAGADYCV AADTRMSTGY+IL+RDYSKI KLADKCVMAS
Sbjct: 1 MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICKLADKCVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADV+ALQK LAARHLIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYYSFNVLGGLD
Sbjct: 61 SGFQADVRALQKHLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
NEGKGCV+TYDAVGSYE+VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA DAVTPLSE E
Sbjct: 121 NEGKGCVFTYDAVGSYEKVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPALDAVTPLSEPE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVKT FASATERDIYT +KLEIV+LN GI REYM+LRKD
Sbjct: 181 AVDLVKTVFASATERDIYTGDKLEIVILNASGIRREYMDLRKD 223
>gi|366984552|gb|AEX09185.1| proteasome subunit beta type 1 [Gossypium hirsutum]
Length = 223
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/223 (88%), Positives = 209/223 (93%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ WSPYDNNGG+CVAIAGADYCV AADTRMSTGY+IL+R+YSKI KLADKCVMAS
Sbjct: 1 MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKICKLADKCVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADV+ALQK LAARHLIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYYSFNVLGGLD
Sbjct: 61 SGFQADVRALQKQLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
NEGKGCV TYDAVGSYE+VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL EAE
Sbjct: 121 NEGKGCVLTYDAVGSYEKVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLVEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+DLVKT FASA+ERDIYT +KLE+V++N GI REYMELRKD
Sbjct: 181 AIDLVKTVFASASERDIYTGDKLELVIINAAGIRREYMELRKD 223
>gi|255541320|ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223548904|gb|EEF50393.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 223
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/223 (88%), Positives = 210/223 (94%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ WSPYDNNGG+CVAIAGADYCV AADTRMSTGY+IL+RDYSKI +LA+K VMAS
Sbjct: 1 MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICQLAEKSVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADV+ALQK L A+HLIYQHQHNKQMSCPAMGQLLSNTLY+KRFFPYY+FNVLGGLD
Sbjct: 61 SGFQADVQALQKHLKAKHLIYQHQHNKQMSCPAMGQLLSNTLYFKRFFPYYAFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+EGKGCVYTYDAVGSYERVGYS+QGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE E
Sbjct: 121 SEGKGCVYTYDAVGSYERVGYSAQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEPE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVKT FASATERDIYT +K+EIVVLN DGI REYMELRKD
Sbjct: 181 AVDLVKTVFASATERDIYTGDKVEIVVLNADGIRREYMELRKD 223
>gi|449432245|ref|XP_004133910.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
Length = 223
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/223 (86%), Positives = 208/223 (93%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ WSPYDNNGG+CVAIAGADYCV AADTR+STGY+IL+RDYSKI KLADK V+AS
Sbjct: 1 MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVLAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK L+ARHLIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD
Sbjct: 61 SGFQADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+EGKGCV+TYDAVGSYERVGYS+QGSGSTLI PFLDNQLKSPSPLLLPAQD+ TPLSEAE
Sbjct: 121 SEGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQDSSTPLSEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+DLVKT FASATERDIYT +KLEIVVLN DG+ REYM LR+D
Sbjct: 181 AIDLVKTVFASATERDIYTGDKLEIVVLNADGLRREYMNLRED 223
>gi|79315846|ref|NP_001030905.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646592|gb|AEE80113.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/223 (85%), Positives = 205/223 (91%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQH WSPYDNNGGTCVAIAG+DYCV AADTRMSTGYSILSRDYSKI KLAD+ V++S
Sbjct: 1 MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L +RHLIYQHQHNKQMSCPAM QLLSNTLY+KRFFPYY+FNVLGGLD
Sbjct: 61 SGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPFLDNQLKSPSPLLLP QD+ TPLSEAE
Sbjct: 121 EEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVKT FASATERDIYT NKLEI++L DGI E M+LRKD
Sbjct: 181 AVDLVKTVFASATERDIYTVNKLEIMILKADGIKTELMDLRKD 223
>gi|600387|emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]
Length = 230
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/223 (85%), Positives = 205/223 (91%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQH WSPYDNNGGTCVAIAG+DYCV AADTRMSTGYSILSRDYSKI KLAD+ V++S
Sbjct: 8 MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSS 67
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L +RHLIYQHQHNKQMSCPAM QLLSNTLY+KRFFPYY+FNVLGGLD
Sbjct: 68 SGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 127
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPFLDNQLKSPSPLLLP QD+ TPLSEAE
Sbjct: 128 EEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAE 187
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVKT FASATERDIYT +KLEI++L DGI E M+LRKD
Sbjct: 188 AVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 230
>gi|15232965|ref|NP_191641.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|334186160|ref|NP_001190146.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|297820934|ref|XP_002878350.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|12643281|sp|P42742.2|PSB1_ARATH RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome beta subunit F-1; AltName: Full=Proteasome
component 5; AltName: Full=Proteasome subunit beta
type-6; AltName: Full=TAS-F22/FAFP98; AltName:
Full=TAS-G39.20
gi|577531|emb|CAA56201.1| proteasome subunit [Arabidopsis thaliana]
gi|3421120|gb|AAC32073.1| 20S proteasome beta subunit PBF1 [Arabidopsis thaliana]
gi|7329692|emb|CAB82686.1| proteasome component C5 [Arabidopsis thaliana]
gi|17065428|gb|AAL32868.1| proteasome component C5 [Arabidopsis thaliana]
gi|20148485|gb|AAM10133.1| proteasome component C5 [Arabidopsis thaliana]
gi|21554745|gb|AAM63678.1| proteasome component C5 [Arabidopsis thaliana]
gi|297324188|gb|EFH54609.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|332646591|gb|AEE80112.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646593|gb|AEE80114.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/223 (85%), Positives = 205/223 (91%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQH WSPYDNNGGTCVAIAG+DYCV AADTRMSTGYSILSRDYSKI KLAD+ V++S
Sbjct: 1 MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L +RHLIYQHQHNKQMSCPAM QLLSNTLY+KRFFPYY+FNVLGGLD
Sbjct: 61 SGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPFLDNQLKSPSPLLLP QD+ TPLSEAE
Sbjct: 121 EEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVKT FASATERDIYT +KLEI++L DGI E M+LRKD
Sbjct: 181 AVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223
>gi|116780814|gb|ABK21828.1| unknown [Picea sitchensis]
gi|116783100|gb|ABK22793.1| unknown [Picea sitchensis]
gi|224284319|gb|ACN39895.1| unknown [Picea sitchensis]
gi|224285431|gb|ACN40438.1| unknown [Picea sitchensis]
Length = 229
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/223 (82%), Positives = 203/223 (91%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
+ + H WSPYDNNGGTC+AIAG++YCV AADTRMSTGYSIL+RDYSKI LADKCVMAS
Sbjct: 7 IKQHHSTWSPYDNNGGTCIAIAGSNYCVIAADTRMSTGYSILTRDYSKICNLADKCVMAS 66
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK L+ARHLIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYYSFNVLGGLD
Sbjct: 67 SGFQADVKALQKNLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLD 126
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
NEGKGCV+TYDAVGSYERVGY +QG+G TL+MP LDNQLKSPSPLLLPAQDA TPLSE+E
Sbjct: 127 NEGKGCVFTYDAVGSYERVGYGAQGTGGTLMMPVLDNQLKSPSPLLLPAQDATTPLSESE 186
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AVDLVK FASA ERDIYT + LEIVV+N +G+ RE++ELR+D
Sbjct: 187 AVDLVKDVFASAAERDIYTGDGLEIVVVNAEGVKREFLELRRD 229
>gi|224067752|ref|XP_002302536.1| predicted protein [Populus trichocarpa]
gi|118484887|gb|ABK94310.1| unknown [Populus trichocarpa]
gi|222844262|gb|EEE81809.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/223 (83%), Positives = 203/223 (91%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ + PYD NGGTCVAIAGADYCV AADTRMSTGY+IL+RDYSKI KLADKC+MAS
Sbjct: 1 MTKQQARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKIYKLADKCLMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADV+ALQK+L A+HLIYQHQHNKQMSCPAM +LLSNTLYYKRFFPYY+FNVL G D
Sbjct: 61 SGFQADVRALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
EGKGCVYTYDAVGSYE+VGYS+QGSG+ LIMP LDNQLKSPSPLLLPAQDAVTPLSEAE
Sbjct: 121 EEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQLKSPSPLLLPAQDAVTPLSEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+D+VK FASATERDIYT +KLEIV+LN DG+ REY ELRKD
Sbjct: 181 AIDVVKDVFASATERDIYTGDKLEIVILNADGMRREYAELRKD 223
>gi|224130004|ref|XP_002320726.1| predicted protein [Populus trichocarpa]
gi|222861499|gb|EEE99041.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/223 (83%), Positives = 203/223 (91%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ + PYD NGGTCVAIAGADYCV AADTRMSTGY+IL+RDYSKI KLADKC+MAS
Sbjct: 1 MTKQQARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLADKCLMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L A+HLIYQHQHNKQMSCPAM +LLSNTLYYKRFFPYY+FNVL G D
Sbjct: 61 SGFQADVKALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
EGKGCVYTYDAVGSYE+VGYS+QGSG+ LIMP LDNQLKSPSPLLLPAQDAVTPL+EAE
Sbjct: 121 EEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQLKSPSPLLLPAQDAVTPLTEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+D+VK FASATERDIYT +KLEIV++N DGI REY ELRKD
Sbjct: 181 AIDVVKDVFASATERDIYTGDKLEIVIVNADGIRREYAELRKD 223
>gi|255640620|gb|ACU20595.1| unknown [Glycine max]
Length = 207
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/204 (91%), Positives = 197/204 (96%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQH WSPYDNNGG+CVAIAGADYCV AADTRMSTGY+IL+RDYSKI +LA+KCVMAS
Sbjct: 1 MTKQHANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L+ARHLIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD
Sbjct: 61 SGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
NEGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE
Sbjct: 121 NEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLE 204
AVDLVKT FASATERDIYT +KL+
Sbjct: 181 AVDLVKTVFASATERDIYTGDKLK 204
>gi|118488258|gb|ABK95948.1| unknown [Populus trichocarpa]
Length = 223
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/223 (82%), Positives = 202/223 (90%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ + PYD NGGTCVAIAGADYCV AADTRMSTGY+IL+RDYSKI KLADKC+MAS
Sbjct: 1 MTKQQARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLADKCLMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADVKALQK+L A+HLIYQHQHNKQMSCPAM +LLSNTLYYKRFFPYY+FNVL G D
Sbjct: 61 SGFQADVKALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
EGKGCVYTYDAVGSYE+VGYS+QGSG+ LIMP LDNQLKSPSPLLLPA DAVTPL+EAE
Sbjct: 121 EEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQLKSPSPLLLPALDAVTPLTEAE 180
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+D+VK FASATERDIYT +KLEIV++N DGI REY ELRKD
Sbjct: 181 AIDVVKDVFASATERDIYTGDKLEIVIVNADGIRREYAELRKD 223
>gi|346467893|gb|AEO33791.1| hypothetical protein [Amblyomma maculatum]
Length = 221
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/213 (83%), Positives = 196/213 (92%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAG DYCV AADTRMS GYSIL+RDYSKI +LADK ++ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGLDYCVVAADTRMSVGYSILTRDYSKICQLADKSILASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
QK LAA+HLIYQHQHNKQMSCPAMGQLLSNTLYYKR PYY+FNVL GLDNEGKGCV+TY
Sbjct: 69 QKNLAAKHLIYQHQHNKQMSCPAMGQLLSNTLYYKRXXPYYAFNVLAGLDNEGKGCVFTY 128
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYERVGYS+QGSGSTLIMP LDNQLKSPSPLLLPA+DAVTPLSE+EAVD+VK FA
Sbjct: 129 DAVGSYERVGYSAQGSGSTLIMPVLDNQLKSPSPLLLPAKDAVTPLSESEAVDMVKDVFA 188
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT ++LEIVV++ GI RE++ELRKD
Sbjct: 189 SATERDIYTGDRLEIVVIDASGIRREFIELRKD 221
>gi|226531171|ref|NP_001152701.1| proteasome subunit beta type 1 [Zea mays]
gi|194701432|gb|ACF84800.1| unknown [Zea mays]
gi|195605546|gb|ACG24603.1| proteasome subunit beta type 1 [Zea mays]
gi|195659171|gb|ACG49053.1| proteasome subunit beta type 1 [Zea mays]
gi|223974469|gb|ACN31422.1| unknown [Zea mays]
gi|414589908|tpg|DAA40479.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/213 (82%), Positives = 196/213 (92%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAGADYCV AADTR+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
QK LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TY
Sbjct: 69 QKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLP +DAVTPLSE+EA+DLVK FA
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPVRDAVTPLSESEAIDLVKDVFA 188
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT +KLEIVV+NK G REY++LRKD
Sbjct: 189 SATERDIYTGDKLEIVVINKAGTMREYIDLRKD 221
>gi|242049776|ref|XP_002462632.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
gi|241926009|gb|EER99153.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
Length = 221
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/213 (82%), Positives = 196/213 (92%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAGADYCV AADTR+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TY
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYER GYS+QG+GSTL+MP LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FA
Sbjct: 129 DAVGSYERTGYSAQGTGSTLMMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFA 188
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT +KLEIVV+NK G REY+ELRKD
Sbjct: 189 SATERDIYTGDKLEIVVINKAGTKREYIELRKD 221
>gi|414886158|tpg|DAA62172.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/213 (82%), Positives = 196/213 (92%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAGADYCV AADTR+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TY
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FA
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFA 188
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT +KLEIVV+NK G REY++LRKD
Sbjct: 189 SATERDIYTGDKLEIVVINKVGTKREYIDLRKD 221
>gi|357159246|ref|XP_003578386.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Brachypodium distachyon]
Length = 221
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/213 (82%), Positives = 196/213 (92%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAGADYCV AADTR+S GYSIL+RD+SKI +L KCV+ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICELXRKCVIASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
QK LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCVY+Y
Sbjct: 69 QKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 128
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DAVTPLSE+EAVDLVK FA
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAVDLVKDVFA 188
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT +K+EIVV+NK G REY+ELRKD
Sbjct: 189 SATERDIYTGDKVEIVVINKAGTRREYIELRKD 221
>gi|14594933|emb|CAC43327.1| putative beta6 proteasome subunit [Nicotiana tabacum]
Length = 192
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/192 (92%), Positives = 187/192 (97%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SPYDNNGGTCVA+AGADYCV AADTRMS+GY+IL+RDYSKIIKLADKCV+ASSGFQADVK
Sbjct: 1 SPYDNNGGTCVAVAGADYCVIAADTRMSSGYNILTRDYSKIIKLADKCVLASSGFQADVK 60
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
ALQK+LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV+
Sbjct: 61 ALQKVLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVF 120
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
TYDAVGSY RVGYSSQGSGSTLIMPFLD QLKSPSPLLLPA+DAVTPLSE+EA+DLVKTC
Sbjct: 121 TYDAVGSYGRVGYSSQGSGSTLIMPFLDYQLKSPSPLLLPAKDAVTPLSESEAIDLVKTC 180
Query: 189 FASATERDIYTA 200
F SATERDIYT
Sbjct: 181 FVSATERDIYTG 192
>gi|168046657|ref|XP_001775789.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672796|gb|EDQ59328.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/217 (79%), Positives = 195/217 (89%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
+WSPYDNNGGTCVAIAGADYCV AADTRMSTG+SIL+RDYSKI ++ +KCV+ASSGFQAD
Sbjct: 13 SWSPYDNNGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHQITEKCVLASSGFQAD 72
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V++LQK L ARH IYQHQHNKQMSCPAM QLLSNTLYYKRFFPYY+FNVLGGLDNEGKGC
Sbjct: 73 VRSLQKNLDARHQIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGC 132
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
VYTYDAVGSYER GYSSQGSG TLIMP LDNQLKS SPL+LP +++ TPL+E EAVDL+K
Sbjct: 133 VYTYDAVGSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESSTPLTENEAVDLIK 192
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
FASA ERDIYT + +EIV++NKDGI RE M L++D
Sbjct: 193 DTFASAAERDIYTGDGVEIVIINKDGIRRETMPLKRD 229
>gi|168019760|ref|XP_001762412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686490|gb|EDQ72879.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/217 (79%), Positives = 195/217 (89%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
+WSPYDNNGGTCVAIAGADYCV AADTRMSTG+SIL+RDYSKI + +KCV+ASSGFQAD
Sbjct: 21 SWSPYDNNGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHHITEKCVLASSGFQAD 80
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V++LQK L ARH IYQHQH+KQMSCPAM QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC
Sbjct: 81 VRSLQKNLDARHQIYQHQHSKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 140
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
VYTYDAVGSYER GYSSQGSG TLIMP LDNQLKS SPL+LP +++ TPL+E+EAVDL+K
Sbjct: 141 VYTYDAVGSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESSTPLTESEAVDLIK 200
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
FASA ERDIYT + +EIV++NK+GI RE M L++D
Sbjct: 201 DTFASAAERDIYTGDGVEIVIINKEGIRRETMALKRD 237
>gi|195611928|gb|ACG27794.1| proteasome subunit beta type 1 [Zea mays]
Length = 221
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/213 (82%), Positives = 195/213 (91%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAGADYCV AADTR+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
QK LAAR L+YQ QHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TY
Sbjct: 69 QKNLAARELLYQXQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLP +DAVTPLSE+EA+DLVK FA
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPVRDAVTPLSESEAIDLVKGVFA 188
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT +KLEIVV+NK G REY++LRKD
Sbjct: 189 SATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>gi|414869634|tpg|DAA48191.1| TPA: proteasome subunit beta type [Zea mays]
Length = 219
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 170/216 (78%), Positives = 198/216 (91%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY+NNGGTC+A+AGADYCV AADTR+S GYSILSRD+SKI +L+DKCV+ASSGFQ D+
Sbjct: 4 FNPYENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSGFQGDI 63
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
KALQK LAA+ LIY+H +NK+MSCPAM QLLSNTLYYKRFFPYY+FNVL GLD +GKGCV
Sbjct: 64 KALQKALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCV 123
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+TYDAVGSYER GYS+QG+GS L+MP LDNQLKSPSPLLLPA+DAVTPLSE++AVDLVK
Sbjct: 124 FTYDAVGSYERTGYSAQGTGSALMMPVLDNQLKSPSPLLLPARDAVTPLSESDAVDLVKD 183
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
FASATERDIYT ++LEIVV+NK G HREY+ELRKD
Sbjct: 184 VFASATERDIYTGDRLEIVVINKSGTHREYIELRKD 219
>gi|224033845|gb|ACN35998.1| unknown [Zea mays]
Length = 221
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/213 (82%), Positives = 195/213 (91%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAGADYCV AADTR+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGK CV+TY
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKECVFTY 128
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FA
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFA 188
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT +KLEIVV+NK G REY++LRKD
Sbjct: 189 SATERDIYTGDKLEIVVINKVGTKREYIDLRKD 221
>gi|115480019|ref|NP_001063603.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|17380182|sp|O64464.1|PSB1_ORYSJ RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3138799|dbj|BAA28276.1| beta 6 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113631836|dbj|BAF25517.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|125606253|gb|EAZ45289.1| hypothetical protein OsJ_29931 [Oryza sativa Japonica Group]
gi|215686333|dbj|BAG87594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736983|dbj|BAG95912.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/213 (81%), Positives = 194/213 (91%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAGADYCV AADTR+S GY+IL+RD+SKI +LADKC +ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TY
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYER GYS+QG+GS LIMP LDNQLKSPSPLLLPA+DAVTPLSE EAVDLVK FA
Sbjct: 129 DAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFA 188
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT +KLEIVV+NK G REY++LRKD
Sbjct: 189 SATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>gi|357148563|ref|XP_003574814.1| PREDICTED: proteasome subunit beta type-1-like [Brachypodium
distachyon]
Length = 219
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/216 (78%), Positives = 194/216 (89%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY+NNGGTCVA+AGADYCV AADTR+S GYSILSR +SKI LADKCV+ASSGFQ D+
Sbjct: 4 FDPYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRAHSKIAHLADKCVLASSGFQGDI 63
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
KALQK L A+ L+Y+H HNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV
Sbjct: 64 KALQKNLTAKELVYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCV 123
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+TYDAVGSYER GYS+QG+G+TL+MP LDNQLKSPSPLLLPA+DAVTPLSE+EAVDLVK
Sbjct: 124 FTYDAVGSYERTGYSAQGTGATLMMPVLDNQLKSPSPLLLPARDAVTPLSESEAVDLVKD 183
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
FASATERDIYT + +EIVV+N G HRE +ELRKD
Sbjct: 184 VFASATERDIYTGDSVEIVVINSSGTHRECIELRKD 219
>gi|218201500|gb|EEC83927.1| hypothetical protein OsI_30000 [Oryza sativa Indica Group]
Length = 219
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/216 (78%), Positives = 195/216 (90%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ Y+NNGGTCVA+AGADYCV AADTR+S GYSILSRD SKI LADKCV+ASSGFQ DV
Sbjct: 4 FEAYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDV 63
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
KALQ+ LAA+ L+Y+H HNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV
Sbjct: 64 KALQRNLAAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCV 123
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+TYDAVGSYER GYS+QG+G+ L+MP LDNQLKSPSPLLLPA+DAVTPLS+++AVDLVK
Sbjct: 124 FTYDAVGSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPARDAVTPLSQSDAVDLVKD 183
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
FASATERDIYT +KLEIVV+N G HRE++ELRKD
Sbjct: 184 VFASATERDIYTGDKLEIVVINSAGSHREFIELRKD 219
>gi|242082111|ref|XP_002445824.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
gi|241942174|gb|EES15319.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
Length = 219
Score = 368 bits (944), Expect = e-99, Method: Compositional matrix adjust.
Identities = 169/216 (78%), Positives = 194/216 (89%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY+NNGGTCVA+AGADYCV AADTR+S GYSILSRD+SKI +LADKCV+ASSGFQ D+
Sbjct: 4 FDPYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDHSKIAQLADKCVLASSGFQGDI 63
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
KALQK L A+ LIY+H +NK+MSCPAM QLLSNTLYYKRFFPYY+FNVL GLD +GKGCV
Sbjct: 64 KALQKALTAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCV 123
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+TYDAVGSYER GYS+QG+GS L+MP LDNQLKSPSPLLLPA+DAVTPLSE++AVDLVK
Sbjct: 124 FTYDAVGSYERTGYSAQGTGSALMMPVLDNQLKSPSPLLLPARDAVTPLSESDAVDLVKD 183
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
FASATERDIYT ++LEIVV+N G HRE +ELRKD
Sbjct: 184 VFASATERDIYTGDRLEIVVINSSGTHRECIELRKD 219
>gi|115477445|ref|NP_001062318.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|42407968|dbj|BAD09106.1| putative proteasome subunit beta type 1 [Oryza sativa Japonica
Group]
gi|113624287|dbj|BAF24232.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|215678609|dbj|BAG92264.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640910|gb|EEE69042.1| hypothetical protein OsJ_28037 [Oryza sativa Japonica Group]
Length = 219
Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 169/216 (78%), Positives = 194/216 (89%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ Y+NNGGTCVA+AGADYCV AADTR+S GYSILSRD SKI LADKCV+ASSGFQ DV
Sbjct: 4 FEVYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDV 63
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
KALQ+ L A+ L+Y+H HNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV
Sbjct: 64 KALQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCV 123
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+TYDAVGSYER GYS+QG+G+ L+MP LDNQLKSPSPLLLPA+DAVTPLS+++AVDLVK
Sbjct: 124 FTYDAVGSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPARDAVTPLSQSDAVDLVKD 183
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
FASATERDIYT +KLEIVV+N G HRE++ELRKD
Sbjct: 184 VFASATERDIYTGDKLEIVVINSAGSHREFIELRKD 219
>gi|226533094|ref|NP_001147213.1| proteasome subunit beta type 1 [Zea mays]
gi|195608582|gb|ACG26121.1| proteasome subunit beta type 1 [Zea mays]
Length = 219
Score = 365 bits (937), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 168/216 (77%), Positives = 196/216 (90%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY+NNGGTC+A+AGADYCV AADTR+S GYSILSRD+SKI +L+DKCV+ASSGFQ D+
Sbjct: 4 FNPYENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSGFQGDI 63
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
KALQK LAA+ LIY+H +NK+MSCPAM QLLSNTLYYKRFFPYY+FNVL GLD +GKGCV
Sbjct: 64 KALQKALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCV 123
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+TYDAVGSYER GYS+QG+GS L+MP LDNQLKSPSPLLLPA+DAVTPLSE++AVDLVK
Sbjct: 124 FTYDAVGSYERTGYSAQGTGSALMMPVLDNQLKSPSPLLLPARDAVTPLSESDAVDLVKD 183
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
FASATERDIYT ++LEIVV+N G HRE +ELRKD
Sbjct: 184 VFASATERDIYTGDRLEIVVINSFGTHRECIELRKD 219
>gi|302774737|ref|XP_002970785.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
gi|302818938|ref|XP_002991141.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300141072|gb|EFJ07787.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300161496|gb|EFJ28111.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
Length = 226
Score = 355 bits (910), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 164/221 (74%), Positives = 188/221 (85%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
K+H WSPY+NNGGTCVAIAG+DYC+ AADTR+S GYSIL+R +SK+ KL+D VMASSG
Sbjct: 6 KEHATWSPYENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSG 65
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
FQADV+ LQK L AR Y HQH K MSCPAM QLLSNTLYYKRFFPYYSFNVLGGLD E
Sbjct: 66 FQADVRTLQKNLEARQKGYYHQHGKPMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDTE 125
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GKGCVYTYDAVGSYER GYS+QGSG+ LIMP LDNQLKS SPLL P ++ TPL+E EA+
Sbjct: 126 GKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEAL 185
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++VK FASATER IYT + LEIVV+NKDGIH+EY++L+KD
Sbjct: 186 EIVKDTFASATERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226
>gi|302810458|ref|XP_002986920.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
gi|300145325|gb|EFJ12002.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
Length = 226
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 163/221 (73%), Positives = 187/221 (84%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
K+H WSPY+NNGGTCVAIAG+DYC+ AADTR+S GYSIL+R +SK+ KL+D VMASSG
Sbjct: 6 KEHATWSPYENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSG 65
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
FQADV+ LQK L AR Y HQH K MSCP M QLLSNTLYYKRFFPYYSFNVLGGLD E
Sbjct: 66 FQADVRTLQKNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTE 125
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GKGCVYTYDAVGSYER GYS+QGSG+ LIMP LDNQLKS SPLL P ++ TPL+E EA+
Sbjct: 126 GKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEAL 185
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++VK FASATER IYT + LEIVV+NKDGIH+EY++L+KD
Sbjct: 186 EIVKDTFASATERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226
>gi|302814429|ref|XP_002988898.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
gi|300143235|gb|EFJ09927.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
Length = 226
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 163/221 (73%), Positives = 186/221 (84%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
K+H WSPY+NNGGTCVAIAG DYC+ AADTR+S GYSIL+R +SK+ KL+D VMASSG
Sbjct: 6 KEHATWSPYENNGGTCVAIAGLDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSG 65
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
FQADV+ LQK L AR Y HQH K MSCP M QLLSNTLYYKRFFPYYSFNVLGGLD E
Sbjct: 66 FQADVRTLQKNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTE 125
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GKGCVYTYDAVGSYER GYS+QGSG+ LIMP LDNQLKS SPLL P ++ TPL+E EA+
Sbjct: 126 GKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEAL 185
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++VK FASATER IYT + LEIVV+NKDGIH+EY++L+KD
Sbjct: 186 EIVKDTFASATERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226
>gi|414886159|tpg|DAA62173.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 234
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/191 (83%), Positives = 177/191 (92%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAGADYCV AADTR+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TY
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FA
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFA 188
Query: 191 SATERDIYTAN 201
SATERDIYT +
Sbjct: 189 SATERDIYTVS 199
>gi|414886157|tpg|DAA62171.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 228
Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 155/191 (81%), Positives = 171/191 (89%), Gaps = 6/191 (3%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAGADYCV AADTR+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVL GKGCV+TY
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVL------GKGCVFTY 122
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FA
Sbjct: 123 DAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFA 182
Query: 191 SATERDIYTAN 201
SATERDIYT +
Sbjct: 183 SATERDIYTVS 193
>gi|449525251|ref|XP_004169631.1| PREDICTED: proteasome subunit beta type-1-like, partial [Cucumis
sativus]
Length = 171
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/171 (87%), Positives = 161/171 (94%)
Query: 53 ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYS 112
ADK V+ASSGFQADVKALQK L+ARHLIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYY+
Sbjct: 1 ADKAVLASSGFQADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYA 60
Query: 113 FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 172
FNVLGGLD+EGKGCV+TYDAVGSYERVGYS+QGSGSTLI PFLDNQLKSPSPLLLPAQD+
Sbjct: 61 FNVLGGLDSEGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQDS 120
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
TPLSEAEA+DLVKT FASATERDIYT +KLEIVVLN DG+ REYM LR+D
Sbjct: 121 STPLSEAEAIDLVKTVFASATERDIYTGDKLEIVVLNADGLRREYMNLRED 171
>gi|303278464|ref|XP_003058525.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459685|gb|EEH56980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 220
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 176/216 (81%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
WSPYDNNGGT +A+AG DY V AADTRMSTGYS+L+RDY KI K+ +KCVMAS+GF AD
Sbjct: 5 WSPYDNNGGTVLAVAGEDYVVCAADTRMSTGYSVLTRDYKKIEKMTEKCVMASAGFMADA 64
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L+K L AR + Y+ Q+NK+M C + Q+LSNTLYY+RFFPYY+FN++ GLD EGKG V
Sbjct: 65 VTLKKTLKARCVSYEFQNNKEMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDKEGKGAV 124
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+TYDAVGSYER YS QGSG LIMP LDNQLK+ SPL+LPAQ + TPLSE+EAVDLVK
Sbjct: 125 FTYDAVGSYERTNYSCQGSGQGLIMPVLDNQLKTVSPLVLPAQSSATPLSESEAVDLVKD 184
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
CFA+A ERDIYT + +EI ++NKDG+ +EY +L+ D
Sbjct: 185 CFATAGERDIYTGDSVEIWIINKDGLRKEYQDLKLD 220
>gi|255076203|ref|XP_002501776.1| predicted protein [Micromonas sp. RCC299]
gi|226517040|gb|ACO63034.1| predicted protein [Micromonas sp. RCC299]
Length = 229
Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 175/216 (81%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
WSPYDNNGGT +A+AG DY V AADTRMSTGY+IL+RDY KI +++DKCV+AS+GF AD
Sbjct: 14 WSPYDNNGGTVLAVAGEDYVVCAADTRMSTGYNILTRDYKKIDQMSDKCVLASAGFMADA 73
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L+K L AR Y+ Q++K M C + Q+LSNTLYY+RFFPYY+FN++ GLD EGKG V
Sbjct: 74 VTLKKTLKARCTTYEFQNDKPMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDAEGKGAV 133
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+TYDAVGSYER YS QGSG LIMP LDNQLK+ SPL+LPAQ + TPLSE+EAVDLVK
Sbjct: 134 FTYDAVGSYERTNYSCQGSGQGLIMPVLDNQLKTVSPLVLPAQSSATPLSESEAVDLVKD 193
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
CFA+A ERDIYT + +EI ++NKDG+ +EY EL+ D
Sbjct: 194 CFATAGERDIYTGDTVEIWIINKDGVRKEYQELKLD 229
>gi|414589907|tpg|DAA40478.1| TPA: hypothetical protein ZEAMMB73_835212 [Zea mays]
Length = 188
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 162/178 (91%)
Query: 46 YSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYK 105
YS KLADKCV+ASSGFQ D+KALQK LAAR L+YQHQHNK+MSCPAM QLLSNTLYYK
Sbjct: 11 YSLHFKLADKCVLASSGFQGDIKALQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYK 70
Query: 106 RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 165
RFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPL
Sbjct: 71 RFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPL 130
Query: 166 LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LLP +DAVTPLSE+EA+DLVK FASATERDIYT +KLEIVV+NK G REY++LRKD
Sbjct: 131 LLPVRDAVTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKAGTMREYIDLRKD 188
>gi|125564290|gb|EAZ09670.1| hypothetical protein OsI_31953 [Oryza sativa Indica Group]
Length = 178
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 158/177 (89%)
Query: 47 SKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKR 106
SK +ADKC +ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKR
Sbjct: 2 SKSKTIADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKR 61
Query: 107 FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL 166
FFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GS LIMP LDNQLKSPSPLL
Sbjct: 62 FFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLL 121
Query: 167 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LPA+DAVTPLSE EAVDLVK FASATERDIYT +KLEIVV+NK G REY++LRKD
Sbjct: 122 LPARDAVTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 178
>gi|412993855|emb|CCO14366.1| predicted protein [Bathycoccus prasinos]
Length = 243
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 172/222 (77%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASS 61
TKQH WSPYDNNGGT +A+AG DY + AADTRMSTGYSI++R Y+K+ +++ K +MAS+
Sbjct: 22 TKQHATWSPYDNNGGTVMAVAGEDYVICAADTRMSTGYSIMTRQYTKVDEMSPKTLMASA 81
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
GF AD L+KLL R YQ +NK + C A Q+LSNTLY +RFFPYY+FN++ GLD
Sbjct: 82 GFMADAATLKKLLKGRCDQYQFANNKPIGCVAFAQMLSNTLYMRRFFPYYAFNIVAGLDA 141
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181
EGKG V+TYDAVGSYER YS QGSG LIMP LDNQLK+ SPL+LPA + TPLSE EA
Sbjct: 142 EGKGAVFTYDAVGSYERTNYSCQGSGQQLIMPVLDNQLKTVSPLVLPAVSSATPLSEEEA 201
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+DL+K CFA+A ERDIYT + +E+ V+NKDGI +E M L+ D
Sbjct: 202 IDLIKDCFATAGERDIYTGDAVELFVMNKDGIRKETMPLKTD 243
>gi|307107838|gb|EFN56080.1| hypothetical protein CHLNCDRAFT_22624 [Chlorella variabilis]
Length = 239
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 172/222 (77%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASS 61
KQH WSPYD+NGGT VA+AG DYCV AA TRMSTGYSIL+R+ SKI++L KCV+AS+
Sbjct: 18 VKQHATWSPYDDNGGTVVAVAGDDYCVVAASTRMSTGYSILTRNKSKILQLNPKCVIASA 77
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
G QAD + L K+L +RH+ YQ H K M+CPAM QLLSNTLYYKRFFPYY+FN+ GLD+
Sbjct: 78 GMQADQETLHKVLHSRHVTYQFNHRKPMACPAMAQLLSNTLYYKRFFPYYTFNLCAGLDD 137
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181
EG+G VYTYDA+GSYERVGY QG+G L+ P LDNQLK+ SPL LP Q ++ L +A
Sbjct: 138 EGRGAVYTYDAIGSYERVGYGCQGNGKELVQPVLDNQLKAASPLALPPQQWLSSLPLEQA 197
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
VDLVK F SA ERDIYT + +EI+++ KD I + +EL++D
Sbjct: 198 VDLVKGAFVSAGERDIYTGDDVEILIITKDCIKTDRLELKRD 239
>gi|414886156|tpg|DAA62170.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 213
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 145/213 (68%), Positives = 169/213 (79%), Gaps = 8/213 (3%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNG + A +T + R S + + ++ A +SSGFQ D+KAL
Sbjct: 9 YENNGPAWPSPA----PITVSSRRTPASLSDTASSRATTLRSA----TSSSGFQGDIKAL 60
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TY
Sbjct: 61 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 120
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FA
Sbjct: 121 DAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFA 180
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT +KLEIVV+NK G REY++LRKD
Sbjct: 181 SATERDIYTGDKLEIVVINKVGTKREYIDLRKD 213
>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 227
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 173/221 (78%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
+QH WSPYDNNGGT +A+AG +Y + A+DTRMSTGYSIL+R+Y K+ +++ K +MAS+G
Sbjct: 7 RQHANWSPYDNNGGTVLAVAGENYVICASDTRMSTGYSILTRNYEKVDQMSPKTLMASAG 66
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
F AD + L+K L AR Y+ Q+ K + C + Q+LSNTLYY+RFFPYY+FN++ GLD E
Sbjct: 67 FMADAQTLKKTLKARCKQYEFQNKKPIGCVSFAQMLSNTLYYRRFFPYYAFNIVAGLDAE 126
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GKG V+TYDAVGSYER YS QGSG LIMP LDNQLK+ SPL+LPA + TPLSEA A+
Sbjct: 127 GKGAVFTYDAVGSYERTNYSCQGSGQALIMPVLDNQLKTVSPLVLPAVSSATPLSEAAAI 186
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+L+K CFA+A ERDIYT +++E+ ++N DG+ +E M LR D
Sbjct: 187 ELIKDCFATAAERDIYTGDRVELWIMNADGVRKEEMPLRLD 227
>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
Length = 233
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 169/221 (76%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
+QH WSPYDNNGGT +A+AG Y + A DTRMS+GY+IL+R + KI K++ K +MAS+G
Sbjct: 13 RQHANWSPYDNNGGTVLAVAGESYVICAGDTRMSSGYNILTRKFEKIDKMSGKTLMASAG 72
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
F AD L+K L AR Y+ Q+ +++ C A Q+LSNTLYY+RFFPYY+FN++ GLD E
Sbjct: 73 FAADAVTLKKTLKARCKQYEFQNKREIGCVAFAQMLSNTLYYRRFFPYYAFNIVAGLDAE 132
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GKG V+TYDAVGSYER YS QGSG LIMP LDNQLK+ SPL+LPA + TPLSE EA+
Sbjct: 133 GKGAVFTYDAVGSYERTNYSCQGSGQALIMPVLDNQLKTVSPLVLPAASSATPLSEQEAI 192
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
DL+K CFA+A ERDIYT + +E+ ++N +G+ +E M LR D
Sbjct: 193 DLIKDCFATAAERDIYTGDSVELWIMNAEGVRKEEMALRAD 233
>gi|222431909|gb|ACM50881.1| 20S proteasome beta subunit F1 [Ulva fasciata]
Length = 241
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 165/221 (74%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
+QH +WSPYDNNGGT VA+AG+DYC+ A TR+STG+S+LSR++S + +L+ CV+ASSG
Sbjct: 21 RQHASWSPYDNNGGTVVAVAGSDYCIIAGSTRLSTGFSVLSREHSSLHQLSRMCVLASSG 80
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
F+ D L K L +R ++YQH H + + C AM Q LSN LY KRFFP+Y+FN+L GLD +
Sbjct: 81 FEGDRATLTKRLKSRAVMYQHSHKRPIGCEAMAQALSNELYGKRFFPFYTFNILAGLDAD 140
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
G G VY+YDAVGSYER GY++QG+G+ L+ P LDNQL++ SPL+LP + +VT L A+
Sbjct: 141 GTGAVYSYDAVGSYERTGYAAQGTGNDLVQPLLDNQLRAASPLVLPKKPSVTALPVERAL 200
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
D+V+ +A ERDIYT + +E+ ++ KDGI +E L+ D
Sbjct: 201 DIVRDALTAAGERDIYTGDSIEVWIMTKDGIRKESTPLKTD 241
>gi|384253987|gb|EIE27461.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 249
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 161/213 (75%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
YDNNGGTCVA+AG DYC+ A+ TR+STG+SILSRD S ++KL+DK ++ S GFQAD K L
Sbjct: 37 YDNNGGTCVAVAGNDYCIVASSTRLSTGFSILSRDVSMVLKLSDKLMILSPGFQADAKTL 96
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
K+L R++ YQ H + MS A QLL NTLYYKRFFPYY+FN+ GLD EGKG VY+Y
Sbjct: 97 HKVLQQRYIRYQFDHGRPMSVAACAQLLGNTLYYKRFFPYYTFNICAGLDEEGKGAVYSY 156
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
DA+GS+ER GY+ QGSG LI P LDNQLK+ SPL+LP ++ ++ L +AVDLV+ F
Sbjct: 157 DAIGSHERSGYAVQGSGKDLIQPVLDNQLKAASPLVLPPENWMSSLPLDQAVDLVRDAFV 216
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA ERDIYT + +EI ++ +G RE +EL+KD
Sbjct: 217 SAGERDIYTGDAVEIYIMTMEGTKREVLELKKD 249
>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
Length = 223
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 160/222 (72%), Gaps = 4/222 (1%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASS 61
T + P +SPY++NGGT +AI G DY + AADTRMS GYSI +R +K+ KL DKCV+AS+
Sbjct: 6 TFERPKFSPYEDNGGTTLAIPGPDYVIVAADTRMSLGYSIQTRKSTKLCKLTDKCVIASA 65
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
G Q+D L K+L R + Y+HQH K MS A+GQ+LSN LY +RFFPYY+FN++ GLD
Sbjct: 66 GMQSDAATLHKVLKMRLVEYEHQHGKPMSVVAVGQMLSNMLYNRRFFPYYTFNLVAGLDT 125
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181
+GKG V++YDA+GSY+ V SQGSG TLI P LDNQ+ + LL+P D L+ ++
Sbjct: 126 DGKGIVFSYDAIGSYQSVEVGSQGSGQTLIQPLLDNQVAFKNHLLVPNTD----LTLEQS 181
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ +VK F SA ERDIYT + +EI+++ K+GI E +EL+KD
Sbjct: 182 LSIVKDAFTSAGERDIYTGDSVEILIITKEGIKTEILELKKD 223
>gi|440796014|gb|ELR17123.1| proteasome subunit protein, putative [Acanthamoeba castellanii str.
Neff]
Length = 236
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 154/222 (69%), Gaps = 3/222 (1%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASS 61
T+ WSPY +NGGT +A+ G D+CV AADTR+STGYSI SR+ K++KL DKCV+A++
Sbjct: 18 TQHGRGWSPYTDNGGTTLALHGKDFCVVAADTRLSTGYSIHSREARKVLKLTDKCVIATA 77
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
G QAD AL KLL R Y+HQH K MS PA+ Q+L+ LY KRFFP+Y+FNVLGG+D+
Sbjct: 78 GMQADQLALHKLLQTRLQWYEHQHRKPMSTPAIAQMLATILYSKRFFPFYTFNVLGGVDD 137
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181
G GCVY+YDAVGS+ERV YSS G+G+ L+ P LDNQ+ A L+ E
Sbjct: 138 NGVGCVYSYDAVGSFERVKYSSSGTGNQLVQPLLDNQIGWKDQR---ATKTKPELNVEET 194
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
VD V+ F SA ERDIYT + + I V++KDG+ +L++D
Sbjct: 195 VDFVRDIFTSAGERDIYTGDYVLIAVIDKDGVKEMKFDLKQD 236
>gi|414886162|tpg|DAA62176.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 135
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/135 (84%), Positives = 126/135 (93%)
Query: 89 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 148
MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GS
Sbjct: 1 MSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGS 60
Query: 149 TLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVL 208
TLIMP LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FASATERDIYT +KLEIVV+
Sbjct: 61 TLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVI 120
Query: 209 NKDGIHREYMELRKD 223
NK G REY++LRKD
Sbjct: 121 NKVGTKREYIDLRKD 135
>gi|298711428|emb|CBJ32569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 251
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 152/216 (70%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
WSPYD NGGT +AIAGADY V AADTRMSTGYSI+SRD +K+ +L KCV+AS+G + DV
Sbjct: 41 WSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDV 100
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K L +Y H K+M+ PA+ Q+L+NTLYY+RFFPYYSFNVL GLD +GKG V
Sbjct: 101 TTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSV 160
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
++YDA+GS+ERV YS+ GSG T I+P LDN ++ +D S AE V+LVK
Sbjct: 161 FSYDAIGSFERVPYSASGSGQTYIIPLLDNLVE-----FKTRKDEKPARSAAETVELVKE 215
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A ERDIYT + +EI +++KDG + L+KD
Sbjct: 216 LLVTAGERDIYTGDAVEITIISKDGTSTQMFPLKKD 251
>gi|302841986|ref|XP_002952537.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
gi|300262176|gb|EFJ46384.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
Length = 212
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 143/207 (69%), Gaps = 8/207 (3%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T VA+AG DYC+ A TRMSTG+SIL+RD S +++L DK V+AS+G QAD KAL KLL
Sbjct: 14 TVVAVAGEDYCIVAGSTRMSTGFSILTRDASMLLQLTDKVVVASAGMQADRKALHKLLQH 73
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R++ YQH H + M A QLLSNTLYY RFFP Y+FN++ GLD +G+G VY YDA+GSY
Sbjct: 74 RNVTYQHNHGRAMGVSAAAQLLSNTLYYNRFFPLYTFNLVAGLDEQGRGAVYNYDAIGSY 133
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
ER GY QGSG LI P L+ L+ P D P A+DLVK F SA ERD
Sbjct: 134 ERSGYFCQGSGKELIQPVLEGILRRP--------DVHVPFRTCMALDLVKDAFVSAGERD 185
Query: 197 IYTANKLEIVVLNKDGIHREYMELRKD 223
IYT +K+EI+++ KDGI RE ++L+ D
Sbjct: 186 IYTGDKVEILIITKDGIKREELQLKLD 212
>gi|328868192|gb|EGG16572.1| proteasome subunit beta type 1 [Dictyostelium fasciculatum]
Length = 236
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 154/220 (70%), Gaps = 4/220 (1%)
Query: 5 HPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGF 63
H + PY +NGGT +A+AG++YC+ A DTRMS G Y I +R Y+K+ KL DKCV+A+SG
Sbjct: 20 HHRFEPYVDNGGTVLAVAGSNYCIVAGDTRMSDGGYGIQTRHYTKVFKLTDKCVIATSGM 79
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
QAD AL+K L + Y+ H K MS PA+ Q LSNTLY+KRFFP+Y+FN++ G+D +G
Sbjct: 80 QADTIALRKRLDTQLRQYERDHGKSMSTPAIAQFLSNTLYHKRFFPFYTFNLVAGVDEDG 139
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
GCV+TYDAVGS+ERV +SSQGSG+ LI P LDNQ+ + ++ D LS +A+
Sbjct: 140 IGCVWTYDAVGSHERVRFSSQGSGNQLIQPLLDNQVGKFNQQIV---DGPRELSAEQALS 196
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LVK SA ERDIYT + +IV +++ G+H E +L+ D
Sbjct: 197 LVKDAITSAGERDIYTGDFADIVTIDQKGVHFEKFDLKLD 236
>gi|330791448|ref|XP_003283805.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
gi|325086304|gb|EGC39696.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
Length = 236
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 151/220 (68%), Gaps = 4/220 (1%)
Query: 5 HPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGF 63
H + Y +NGGT +A+AG DYCV A DTRMS G Y I +R Y+K+ +L +KCV+A+SG
Sbjct: 20 HGRFEAYVDNGGTVMAVAGKDYCVIAGDTRMSDGGYGIQTRHYTKVFQLTNKCVLATSGM 79
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
QAD ALQK L YQ +H K MS PA+ Q LSNTLYYKRFFPYY+FN++ G+D +G
Sbjct: 80 QADTIALQKRLKLMLETYQKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEKG 139
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
+G ++TYDAVGS+ERV YSSQGSG+ L++P LDNQ+ + ++ V S + V
Sbjct: 140 EGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKRNQQIIQGNGDV---SCDQVVS 196
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
VK SA ERDIYT + +IVV++KDG+ E EL+ D
Sbjct: 197 FVKDAITSAGERDIYTGDFADIVVVDKDGVRWEKFELKLD 236
>gi|111226971|ref|XP_001134620.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
gi|74926737|sp|Q86A21.1|PSB1_DICDI RecName: Full=Proteasome subunit beta type-1
gi|90971293|gb|EAS66954.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
Length = 236
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 152/220 (69%), Gaps = 4/220 (1%)
Query: 5 HPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGF 63
H + Y +NGGT +A+AG DYCV A DTRMS G Y I +R Y+KI +L KCV+A+SG
Sbjct: 20 HGRFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGM 79
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
QAD ALQK L + ++ +H K MS PA+ Q LSNTLYYKRFFPYY+FN++ G+D +G
Sbjct: 80 QADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQG 139
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
+G ++TYDAVGS+ERV YSSQGSG+ L++P LDNQ+ + ++ V S + V
Sbjct: 140 EGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDV---SCEQVVS 196
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
VK SA ERDIYT + +IVV++K+G+H E EL+ D
Sbjct: 197 FVKDSITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236
>gi|449020004|dbj|BAM83406.1| 20S core proteasome subunit beta 6 [Cyanidioschyzon merolae strain
10D]
Length = 244
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 151/224 (67%), Gaps = 1/224 (0%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
+ WSPY +NGGT +A+AG DY + AADTR+S G+SI SR+++KI++L D+ V+AS
Sbjct: 21 IVSHQRTWSPYVDNGGTVLALAGRDYAIVAADTRLSVGFSIPSRNFTKIVQLTDQAVLAS 80
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+G AD + L K+L +R IY++QH K+MS A+ QLLSNTLY +RFFP Y+FNVLGG+D
Sbjct: 81 AGMGADRQYLHKILRSRLEIYRYQHQKEMSLGAIAQLLSNTLYSRRFFPIYAFNVLGGID 140
Query: 121 -NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 179
N G+G V+ YDA+GS+E+V GSG TL+ P LD QL +P + LS A
Sbjct: 141 ANTGEGFVFGYDAIGSFEKVKVVCSGSGQTLVQPVLDQQLAGRQKYDVPDDQRMASLSLA 200
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
EA++L + F SA ERDI T + LE+ + G+ E ELR+D
Sbjct: 201 EAIELTRDVFNSAAERDILTGDALELYAVTASGVRCERFELRRD 244
>gi|397610458|gb|EJK60845.1| hypothetical protein THAOC_18741 [Thalassiosira oceanica]
Length = 283
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 151/216 (69%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY+ NGGT +AI+G DY V AADTR+S+GY ILSR+ SK+ L +CV+ S+G + DV
Sbjct: 73 FSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTGRCVLGSAGCKTDV 132
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L+ +L + +Y H H K M+ P++ Q+L NTLYYKRFFPYYSFNVL G+D+EGKG V
Sbjct: 133 DQLRSVLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFNVLAGIDSEGKGAV 192
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YDA+GS+ER +S+ GSG + ++P +DN + + L D L E V++VK
Sbjct: 193 YSYDAIGSFERTPFSASGSGQSFLIPLMDNVISHKNRL-----DERRDLPAEEVVEIVKD 247
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F +A ERDIYT + ++I+V+ KDGI ++ +L+ D
Sbjct: 248 AFLTAGERDIYTGDAVDIMVITKDGIDKQTFQLKAD 283
>gi|359473811|ref|XP_002264176.2| PREDICTED: proteasome subunit beta type-1-like [Vitis vinifera]
Length = 149
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/133 (81%), Positives = 116/133 (87%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ WS Y+NNGG+CVAIAGADYCV + TRMS GY+IL+ DYSKI KLADKCVMAS
Sbjct: 1 MTKQQANWSLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMAS 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADV+ALQK LAAR LIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYYSFNVLGGLD
Sbjct: 61 SGFQADVRALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLD 120
Query: 121 NEGKGCVYTYDAV 133
NEGKG + +D V
Sbjct: 121 NEGKGWRWRFDIV 133
>gi|281210614|gb|EFA84780.1| proteasome subunit beta type 1 [Polysphondylium pallidum PN500]
Length = 235
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 149/217 (68%), Gaps = 4/217 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
+ PY +NGGT +AIAG+DYCV A DTRMS G Y I +R Y+KI +L +KCV+A+SG QAD
Sbjct: 22 FEPYVDNGGTVLAIAGSDYCVIAGDTRMSDGGYGIQTRQYTKIFQLTNKCVIATSGMQAD 81
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL+K L YQ +H K MS PA+ Q LSNTLY KRFFPYY+FN++ G+D +G GC
Sbjct: 82 TLALRKRLETVLSRYQKEHGKPMSTPAISQYLSNTLYQKRFFPYYTFNLVCGVDEDGVGC 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
++TYDAVGS+ERV SSQGSG+ L+ P LDNQ+ + ++ D LS +AV L K
Sbjct: 142 IWTYDAVGSHERVKMSSQGSGNQLVQPLLDNQVGKFNQRIV---DGPRELSSEQAVSLAK 198
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA ERDIYT + +IVV+N G+H E L+ D
Sbjct: 199 DAITSAGERDIYTGDFADIVVINSTGVHWEKFNLKLD 235
>gi|428182497|gb|EKX51358.1| 20S proteasome subunit beta type 1 [Guillardia theta CCMP2712]
Length = 230
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 153/216 (70%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NNGGTC+A+AGAD+C+ AAD+R+S GYSILSR+ K+ +L K +ASSG AD+
Sbjct: 19 FSPYQNNGGTCLALAGADFCIIAADSRLSLGYSILSRNTPKVAQLTTKTCIASSGCNADM 78
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
LQK L + +Y HQH K+MS PA+ Q+L+ TLY++RFFPYY+FN++GGLD G+GCV
Sbjct: 79 VTLQKYLKFKIQMYLHQHGKEMSTPAVAQMLATTLYHRRFFPYYTFNIVGGLDQNGEGCV 138
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
++YDA+G +ER+ Y+ GSG LI PFLDN + + P + S E ++LVK
Sbjct: 139 FSYDAIGCFERLKYTVSGSGHALIEPFLDNLVAYKNTDNKPTIER----SCDETLELVKD 194
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F+SA ERDIYT + ++I +++K+G E L+KD
Sbjct: 195 IFSSAGERDIYTGDFVDIYIIDKNGTRYEQFPLKKD 230
>gi|223993685|ref|XP_002286526.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977841|gb|EED96167.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 280
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 147/216 (68%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY+ NGGT +AI+G DY V AADTR+S+GY ILSR+ SK+ L +KCV+ S+G + DV
Sbjct: 70 FSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVLGSAGCKTDV 129
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L+ +L + +Y H H K M+ P++ Q+L NTLY KRFFPYYSFNVL G+D+EGKG V
Sbjct: 130 DQLRSVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAV 189
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YDA+GS+ER +S+ GSG ++P +DN + + L D L E V++VK
Sbjct: 190 YSYDAIGSFERTPFSASGSGQAFLIPLMDNVISHKNRL-----DQKRELGSEEVVEIVKD 244
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F +A ERDIYT + +EI+V+ GI E +L+ D
Sbjct: 245 AFLTAGERDIYTGDAVEIMVITAKGIESETFKLKAD 280
>gi|296088721|emb|CBI38171.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/127 (84%), Positives = 113/127 (88%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQ WS Y+NNGG+CVAIAGADYCV + TRMS GY+IL+ DYSKI KLADKCVMAS
Sbjct: 89 MTKQQANWSLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMAS 148
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SGFQADV+ALQK LAAR LIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYYSFNVLGGLD
Sbjct: 149 SGFQADVRALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLD 208
Query: 121 NEGKGCV 127
NEGKG V
Sbjct: 209 NEGKGWV 215
>gi|320163476|gb|EFW40375.1| proteasome subunit beta type-1 [Capsaspora owczarzaki ATCC 30864]
Length = 238
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 145/216 (67%), Gaps = 3/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY +NGGT VA+AG ++ V A+DTR+S Y I +R+ K L+DK V+AS GF DV
Sbjct: 26 FSPYASNGGTVVAVAGENFAVVASDTRLSEYYGIHTRNCPKTFVLSDKTVLASCGFHGDV 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K + R Y+HQH K M+ A+ Q+LSNTLYY+RFFP+Y++NV+GGLD GKG V
Sbjct: 86 LTLTKNIFTRLRKYEHQHEKTMATHAIAQMLSNTLYYRRFFPFYTYNVIGGLDESGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YD VGSYER Y + G+ S L+ P LDNQL + L PL+ A AV +VK
Sbjct: 146 YSYDPVGSYERESYRAAGTASALLQPLLDNQLGYKN---LAPNVPRPPLTVARAVAIVKD 202
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
FA+ATERDIYT + ++I V+ +G+ E ELRKD
Sbjct: 203 VFAAATERDIYTGDSVDIQVITSEGVATERYELRKD 238
>gi|442749997|gb|JAA67158.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Ixodes ricinus]
Length = 232
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 145/216 (67%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY +NGG+ VAIAG D+ V A+D+R+S GY I +RD SK+ KL+DKC++ S G D+
Sbjct: 21 FSPYSDNGGSIVAIAGEDFVVIASDSRLSAGYHIYTRDQSKLFKLSDKCILGSGGCWCDI 80
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+ L AR +Y H+H+K MS PA+ QL+ LY+KRFFPYY N+L GLD EGKGC+
Sbjct: 81 LTFTRFLEARMKMYLHEHHKPMSTPAVAQLIVTMLYHKRFFPYYISNILAGLDEEGKGCI 140
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YD VG ERV Y S GSGS L+ P LD+Q+ + + AV P E A+ ++K
Sbjct: 141 YSYDPVGHCERVQYRSGGSGSALLQPLLDSQIGFKNQV---GAVAVPPTRE-RAISIIKD 196
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + + + +++KDG+H E LR+D
Sbjct: 197 VFISAAERDMYTGDSVIVNIIDKDGVHEERFPLRRD 232
>gi|357605013|gb|EHJ64427.1| proteasome subunit beta 1 [Danaus plexippus]
Length = 232
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 143/218 (65%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY +NGG+ VAIAG DY V ADTR+STG+SI +R+ K+ KL+D+ V+ ++G D
Sbjct: 21 FEPYADNGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSDRTVLGATGCWCDT 80
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L +LL AR +Y+H+HNK MS PA+ Q+LS LYYKRFFPYY NVL GLD EGKGCV
Sbjct: 81 LTLTRLLQARMQMYEHEHNKAMSTPAVAQMLSTMLYYKRFFPYYISNVLAGLDAEGKGCV 140
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y+YD +G ER Y + GS + P LDNQ+ L VT PLS +A+ L+
Sbjct: 141 YSYDPIGHCERSNYRAGGSAGAQLQPLLDNQIG------LKNMQNVTEAPLSREKALALL 194
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERDIYT + + I+++ +GI E ELRKD
Sbjct: 195 KDVFISAAERDIYTGDSIYILIITANGIQEEKFELRKD 232
>gi|401402253|ref|XP_003881203.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
gi|325115615|emb|CBZ51170.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
Length = 246
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 142/216 (65%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NNGGT V +AG D+ V DTR+STG+SI SR SKI KL DK V+A+SG QAD
Sbjct: 36 FSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRFQSKITKLTDKVVLATSGMQADK 95
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L LL R Y HQH S A+ QLLS LY +RFFP+Y+FNVL G+D GKG V
Sbjct: 96 TTLHNLLQIRIEQYTHQHRHPPSLNAIAQLLSTMLYSRRFFPFYTFNVLCGIDENGKGAV 155
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YDA+GS+E Y+ G+G+ LIMP LDNQ+ + Q PL+ + VD++K+
Sbjct: 156 YGYDAIGSFEAARYNCAGTGAHLIMPVLDNQISRNN-----QQGEKAPLTREQVVDIIKS 210
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ASA ERDI+T ++ E+V++++ GI + M+LR D
Sbjct: 211 AVASAGERDIFTGDQAEVVMISQSGIEKTLMDLRAD 246
>gi|340374856|ref|XP_003385953.1| PREDICTED: proteasome subunit beta type-1-B-like [Amphimedon
queenslandica]
Length = 223
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 145/216 (67%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
WSPY NGGT +A++G D+ V A+DTR+S G+ I SRD+ K +L D V+ S GFQ DV
Sbjct: 12 WSPYSWNGGTVLAVSGEDFSVIASDTRLSEGFQIYSRDFPKTYQLGDNVVLGSCGFQGDV 71
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ A+ IY H + K+MSC ++ QLLS LY +RFFPYY++N+L GLD++GKGCV
Sbjct: 72 TTLNKVIEAQLKIYDHIYQKKMSCESLAQLLSTILYTRRFFPYYTYNILAGLDSKGKGCV 131
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+++D +GSYER Y + GS S+++ P LDNQ+ LL PLS +AV LV
Sbjct: 132 FSFDPIGSYEREVYRAGGSASSMLQPLLDNQIG----LLNQTGVEKKPLSVEKAVQLVTD 187
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERDIYT + + I +++ DG+ + + LR+D
Sbjct: 188 VFTSAAERDIYTGDGIRINIISADGVDIKEVPLRRD 223
>gi|443688987|gb|ELT91509.1| hypothetical protein CAPTEDRAFT_172055 [Capitella teleta]
Length = 229
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 146/224 (65%), Gaps = 8/224 (3%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASS 61
T + ++PY NGG+ +AIAG D+ V A+DTR+S G+SI SR+ K KL DK V+AS+
Sbjct: 12 TPKQAHFNPYSFNGGSIMAIAGDDFAVVASDTRLSEGFSIHSRNAPKTYKLTDKTVLASA 71
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
GF DV K+L AR +Y+H+H K+MS A+ +L+ LY+KRFFPYY +N++GGLD
Sbjct: 72 GFHGDVLTEIKVLEARLKMYEHEHGKKMSSQAIAAMLATILYHKRFFPYYVYNIIGGLDE 131
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEA 179
EGKGCVY+YD VGSYER Y + GS L+ P LDNQ+ Q V LS+
Sbjct: 132 EGKGCVYSYDPVGSYEREVYRAGGSAGPLLQPLLDNQIG------FKNQQGVEKVSLSKD 185
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A+ L+K F SA ERDIYT + L + V+ K+G+ E LR+D
Sbjct: 186 KAIKLIKDIFISAAERDIYTGDSLHLKVVTKEGVSEETFPLRRD 229
>gi|260799786|ref|XP_002594865.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
gi|229280102|gb|EEN50876.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
Length = 235
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 141/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG DY V A D R+S +SILSRD K KL D V+ GF DV
Sbjct: 24 FSPYSWNGGTVLAIAGEDYAVLACDARLSEYFSILSRDSPKRYKLTDMTVLGCCGFHGDV 83
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K+L AR Y+H+HNK MSC ++ +LS LYY+RFFPYY++N+L GLD EGKGCV
Sbjct: 84 LTLTKMLDARLKNYKHEHNKTMSCKSIAAMLSTVLYYRRFFPYYTYNILAGLDEEGKGCV 143
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y++D +GSYER Y + GS S L+ P LDNQ+ + V P+ + +AV LV
Sbjct: 144 YSFDPIGSYEREVYRAGGSASALLQPLLDNQIG------MKNMQGVQRLPVPKEKAVALV 197
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERDIYT +++ I V+ KDGI E LR+D
Sbjct: 198 KDVFISAAERDIYTGDQIIINVITKDGIQEESFPLRRD 235
>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 144/216 (66%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AI+G D+ V A+DTR+S G+ I +RD K+ KL V+ SGF D
Sbjct: 18 FSPYAFNGGTVLAISGEDFAVIASDTRLSQGFQIHTRDSPKVYKLTGSTVLGCSGFHGDC 77
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K ++AR +Y+H H K MSC A+ Q+LS LYY+RFFPYY++N+L GLD+EGKGCV
Sbjct: 78 LTLTKHISARLQMYEHDHGKAMSCTAIAQMLSTMLYYRRFFPYYTYNILAGLDSEGKGCV 137
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+++D VGSYER Y + GS S L+ P LDNQ+ + +P TPL+ +AV LVK
Sbjct: 138 FSFDPVGSYEREVYRAGGSASALLQPLLDNQIGFKNQEGVPH----TPLTRDKAVALVKD 193
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERDIYT + + I V++ +G+ E LR+D
Sbjct: 194 VFTSAAERDIYTGDAVIINVVSSEGVSEEAFPLRRD 229
>gi|195998844|ref|XP_002109290.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
gi|190587414|gb|EDV27456.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
Length = 235
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 148/222 (66%), Gaps = 9/222 (4%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH + PY NGGT V +AG ++ + A DTR+S G+ I SRD SKI KL +K + + GF
Sbjct: 21 QH-RFDPYTLNGGTIVGVAGDNFAILAGDTRLSEGFMIHSRDTSKIYKLTEKTFLGTCGF 79
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
Q DV L +LL AR +Y+ +H K+MS A+ Q+LS LYY+RFFPYY+FN+L G+D +G
Sbjct: 80 QGDVLTLTRLLNARLTMYEFEHRKKMSSTAISQMLSTVLYYRRFFPYYTFNILAGIDTDG 139
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEA 181
KGC+Y+YDAVG+YE+ Y + G+ S+++ P LDNQ+ + Q+ V PL+ +A
Sbjct: 140 KGCIYSYDAVGNYEKHTYHASGTASSMLQPLLDNQVGYLN------QEGVRRVPLTIDKA 193
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L+K F SATERD+YT + L IV + DG+ ++ LR+D
Sbjct: 194 RTLIKDVFISATERDMYTGDSLHIVTITSDGVTEDHFPLRRD 235
>gi|221484304|gb|EEE22600.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
Length = 359
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 141/216 (65%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NNGGT V +AG D+ V DTR+STG+SI SR SKI KL DK V+A+SG +AD
Sbjct: 149 FSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGMEADK 208
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L LL R Y HQH S A+ QLLS LY +RFFP+Y+FNVL G+D GKG V
Sbjct: 209 TTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAV 268
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YDA+GS+E Y+ G+G+ LIMP LDNQ+ + Q PL+ V++VK+
Sbjct: 269 YGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQISRNN-----QQGEKAPLTRERIVEIVKS 323
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ASA ERDI+T ++ E+V++++ GI + M+LR D
Sbjct: 324 AVASAGERDIFTGDQAEVVMISQSGIEKTLMDLRAD 359
>gi|350539311|ref|NP_001232140.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129774|gb|ACH46272.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129776|gb|ACH46274.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129778|gb|ACH46276.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129780|gb|ACH46278.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129781|gb|ACH46279.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129782|gb|ACH46280.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129783|gb|ACH46281.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 148/220 (67%), Gaps = 4/220 (1%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH +SPY NGGT +AIAG D+C+ A+DTR+S GYSI SRD K KL ++ V+ +GF
Sbjct: 23 QHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGF 82
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG
Sbjct: 83 HGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 142
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY++D VGSYER + + GS S ++ P LDNQ+ + + + V PL+ +A+
Sbjct: 143 KGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKN---MQNVEHV-PLTLEKALQ 198
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LVK F SA ERD+YT + L+I ++ KDGI + ++LRKD
Sbjct: 199 LVKDVFISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238
>gi|221505718|gb|EEE31363.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 361
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 141/216 (65%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NNGGT V +AG D+ V DTR+STG+SI SR SKI KL DK V+A+SG +AD
Sbjct: 151 FSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGMEADK 210
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L LL R Y HQH S A+ QLLS LY +RFFP+Y+FNVL G+D GKG V
Sbjct: 211 TTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAV 270
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YDA+GS+E Y+ G+G+ LIMP LDNQ+ + Q PL+ V++VK+
Sbjct: 271 YGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQISRNN-----QQGEKAPLTRERIVEIVKS 325
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ASA ERDI+T ++ E+V++++ GI + M+LR D
Sbjct: 326 AVASAGERDIFTGDQAEVVMISQSGIEKTLMDLRAD 361
>gi|197129773|gb|ACH46271.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 148/220 (67%), Gaps = 4/220 (1%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH +SPY NGGT +AIAG D+C+ A+DTR+S GYSI SRD K KL ++ V+ +GF
Sbjct: 23 QHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGF 82
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG
Sbjct: 83 HGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 142
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY++D VGSYER + + GS S ++ P LDNQ+ + + + V PL+ +A+
Sbjct: 143 KGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKN---MQNVEHV-PLTLEKALQ 198
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LVK F SA ERD+YT + L+I ++ KDGI + ++LRKD
Sbjct: 199 LVKDVFISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238
>gi|197129784|gb|ACH46282.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 148/220 (67%), Gaps = 4/220 (1%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH +SPY NGGT +AIAG D+C+ A+DTR+S GYSI SRD K KL ++ V+ +GF
Sbjct: 23 QHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGF 82
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG
Sbjct: 83 HGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 142
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY++D VGSYER + + GS S ++ P LDNQ+ + + + V PL+ +A+
Sbjct: 143 KGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKN---MQNVEHV-PLTLEKALQ 198
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LVK F SA ERD+YT + L+I ++ KDGI + ++LRKD
Sbjct: 199 LVKDVFISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238
>gi|384485678|gb|EIE77858.1| hypothetical protein RO3G_02562 [Rhizopus delemar RA 99-880]
Length = 232
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 147/221 (66%), Gaps = 6/221 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH + PYD+NGGT VAIAG D+C+ AADTR STGY+I SR K KL++ V+A +GF
Sbjct: 17 QH-RFEPYDDNGGTSVAIAGKDFCIVAADTRQSTGYNINSRFAPKAYKLSETSVIAMNGF 75
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD L+K+L R Y+ H+K MSC A+ Q+LS TLY KRFFPYYSF VLGG+D EG
Sbjct: 76 HADGLTLKKVLDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGVDEEG 135
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY YDA+GSYER + GS + LI PFLDNQ+ + + +D + EA+
Sbjct: 136 KGAVYCYDAIGSYEREKCRASGSAAALIQPFLDNQVSKKNMQNVSTED----IELDEAIK 191
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDG-IHREYMELRKD 223
+VK F SATERDIYT + L+I ++ KD + + L+KD
Sbjct: 192 IVKDAFTSATERDIYTGDNLQIFIIRKDQPVEIQVHPLKKD 232
>gi|237838257|ref|XP_002368426.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
gi|211966090|gb|EEB01286.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
Length = 359
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 141/216 (65%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NNGGT V +AG D+ V DTR+STG+SI SR SKI KL DK V+A+SG +AD
Sbjct: 149 FSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGMEADK 208
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L LL R Y HQH S A+ QLLS LY +RFFP+Y+FNVL G+D GKG V
Sbjct: 209 TTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAV 268
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YDA+GS+E Y+ G+G+ LIMP LDNQ+ + Q PL+ V++VK+
Sbjct: 269 YGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQISRNN-----QQGEKAPLTRERIVEIVKS 323
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ASA ERDI+T ++ E+V++++ GI + M+LR D
Sbjct: 324 AVASAGERDIFTGDQAEVVMISQSGIEKTLMDLRAD 359
>gi|340716619|ref|XP_003396794.1| PREDICTED: proteasome subunit beta type-1-like [Bombus terrestris]
Length = 236
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 145/219 (66%), Gaps = 8/219 (3%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
++SPY +NGG+ +A+AG D+CV AADTR+STG+SI +R+ K+ L+ K ++ SG D
Sbjct: 24 SFSPYADNGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCD 83
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
L +LL+AR +Y+H+H K+M A+ Q+LS LYYKRFFPYY N+LGGLD +GKGC
Sbjct: 84 TLTLTRLLSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDEDGKGC 143
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDL 184
VY+YD +G E Y + GS L+ P LDNQ+ + Q+ V PL++ +AV +
Sbjct: 144 VYSYDPIGHCEVTKYRAGGSAGALLQPLLDNQIGYKN------QEGVEPVPLTQEKAVAI 197
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+K F SA ERDIYT + + I ++ KDGI ELRKD
Sbjct: 198 IKDVFISAAERDIYTGDSISIKIITKDGIQDSTFELRKD 236
>gi|350396993|ref|XP_003484732.1| PREDICTED: proteasome subunit beta type-1-like [Bombus impatiens]
Length = 236
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 145/219 (66%), Gaps = 8/219 (3%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
++SPY +NGG+ +A+AG D+CV AADTR+STG+SI +R+ K+ L+ K ++ SG D
Sbjct: 24 SFSPYADNGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCD 83
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
L +LL+AR +Y+H+H K+M A+ Q+LS LYYKRFFPYY N+LGGLD +GKGC
Sbjct: 84 TLTLTRLLSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDEDGKGC 143
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDL 184
VY+YD +G E Y + GS L+ P LDNQ+ + Q+ V PL++ +AV +
Sbjct: 144 VYSYDPIGHCEVTKYRAGGSAGALLQPLLDNQIGYKN------QEGVEPIPLTQEKAVAI 197
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+K F SA ERDIYT + + I ++ KDGI ELRKD
Sbjct: 198 IKDVFISAAERDIYTGDSISIKIITKDGIQDSTFELRKD 236
>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
dendrobatidis JAM81]
Length = 231
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 143/221 (64%), Gaps = 12/221 (5%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
A+SPY +NGGT +AIAG D+CV A DTR S GYSI +R K+ ++ + V+A+ G AD
Sbjct: 19 AFSPYTDNGGTTLAIAGDDFCVIAGDTRQSEGYSINTRYAPKVHEMRNGTVLATGGMFAD 78
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
+ L K + R YQ QH+K MS PAM Q+LS LYYKRFFPY+S+ +GGLD GKGC
Sbjct: 79 SQTLMKRIQQRLEWYQFQHDKNMSAPAMAQMLSTILYYKRFFPYFSWCSVGGLDEHGKGC 138
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK----SPSPLLLPAQDAVTPLSEAEAV 182
VYTYD VG+YERV + GS LI PFLDNQ+ S + LP+ + V
Sbjct: 139 VYTYDPVGNYERVSWDCGGSAGKLIQPFLDNQIGKHHMSGASKSLPSLETVK-------- 190
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+VK F SATERDIYT + LEI V+ KDGI +E + L+ D
Sbjct: 191 RIVKDAFTSATERDIYTGDFLEIFVITKDGITKEMLPLKLD 231
>gi|384497220|gb|EIE87711.1| hypothetical protein RO3G_12422 [Rhizopus delemar RA 99-880]
Length = 232
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 147/221 (66%), Gaps = 6/221 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH + PYD+NGGT VAIAG D+C+ AADTR STGY+I SR K KL++ V+A +GF
Sbjct: 17 QH-RFEPYDDNGGTSVAIAGKDFCIVAADTRQSTGYNINSRFSPKAYKLSETSVIAMNGF 75
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD L+K+L R Y+ H+K MSC A+ Q+LS TLY KRFFPYYSF VLGG+D EG
Sbjct: 76 HADGLTLKKVLDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGVDEEG 135
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY YDA+GSYER + GS + LI PFLDNQ+ + + +D + EA+
Sbjct: 136 KGAVYCYDAIGSYEREKCRASGSAAALIQPFLDNQVSKKNMQNVSLED----IELDEAIK 191
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDG-IHREYMELRKD 223
+VK F SATERDIYT + L+I ++ KD + + L+KD
Sbjct: 192 VVKDAFTSATERDIYTGDNLQIFIIRKDQPVDVQIHPLKKD 232
>gi|211939905|gb|ACJ13433.1| proteasome subunit beta 1 [Helicoverpa armigera]
Length = 232
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 143/218 (65%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY +NGG+ VAIAG D+ V ADTR+STG+SI +R+ K+ KL+DK V+ ++G D
Sbjct: 21 FEPYADNGGSIVAIAGDDFAVIGADTRLSTGFSIYTREQKKLFKLSDKTVLGATGCWCDT 80
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L +LL+AR +Y+H+HNK MS PA+ Q+LS LYYKRFFPYY NVL GLD +GKGCV
Sbjct: 81 LTLTRLLSARMQMYEHEHNKSMSTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDADGKGCV 140
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y+YD +G ER Y + GS + P LDNQ+ L VT P+ + +A+ L+
Sbjct: 141 YSYDPIGHCERSNYRAGGSAGAQLQPLLDNQIG------LKNMQNVTEAPIPKEKALALL 194
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERDIYT + + I+++ GI E ELRKD
Sbjct: 195 KDVFISAAERDIYTGDCIYILIITASGIQEEKFELRKD 232
>gi|294940012|ref|XP_002782634.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239894486|gb|EER14429.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 241
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 143/216 (66%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGTC+A+ GADYCV + D R+S GYSI +R+ SKI KL ++CV+ +SG AD
Sbjct: 30 FNPYMDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITTSGMLADQ 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K+L R Y H+H ++ + A+ Q+LSN LYYKRFFPYY+FN++ G+D GKG V
Sbjct: 90 ITLHKVLKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGKGKV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YDA+GS+E + +QGSGS+L+ LDNQL L + L+E + V+L K
Sbjct: 150 YGYDAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHE----ALTEGQMVELCKD 205
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ASATERDI+T + I ++ GI + ELRKD
Sbjct: 206 VIASATERDIHTGDSNTICTIDSTGIKMQTFELRKD 241
>gi|294955484|ref|XP_002788528.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239904069|gb|EER20324.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 241
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 143/216 (66%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGTC+A+ GADYCV + D R+S GYSI +R+ SKI KL ++CV+ +SG AD
Sbjct: 30 FNPYMDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITTSGMLADQ 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K+L R Y H+H ++ + A+ Q+LSN LYYKRFFPYY+FN++ G+D GKG V
Sbjct: 90 ITLHKVLKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGKGKV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YDA+GS+E + +QGSGS+L+ LDNQL L + L+E + V+L K
Sbjct: 150 YGYDAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHE----ALTEGQMVELCKD 205
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ASATERDI+T + I ++ GI + ELRKD
Sbjct: 206 VIASATERDIHTGDSNTICTIDSTGIKIQTFELRKD 241
>gi|383853088|ref|XP_003702056.1| PREDICTED: proteasome subunit beta type-1-like [Megachile
rotundata]
Length = 236
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 146/219 (66%), Gaps = 8/219 (3%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
+++PY +NGG+ +A+AG D+CV AADTR+S G+SI +R+ K+ L+ K V+ SG D
Sbjct: 24 SFNPYADNGGSVIALAGDDFCVIAADTRLSVGFSIYTREQQKLFPLSSKTVLGCSGCWCD 83
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
L + L+AR +Y+H+H K+M+ PA+ Q+LS LYY+RFFPYY N++GGLD++G GC
Sbjct: 84 TLTLTRFLSARMQMYEHEHQKEMATPAVAQMLSTMLYYRRFFPYYISNIIGGLDDKGHGC 143
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDL 184
VY+YD +G E Y + GS L+ P LDNQ+ + Q+ V PL++ +A+ +
Sbjct: 144 VYSYDPIGHCEAAKYRAGGSAGALLQPLLDNQIGYKN------QEGVEPVPLTQEKAIAV 197
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+K F SA ERDIYT + + I ++ KDGI E ELRKD
Sbjct: 198 IKDVFISAAERDIYTGDSISIKIITKDGIKDESFELRKD 236
>gi|335955152|gb|AEH76582.1| proteasome subunit beta type [Epinephelus bruneus]
Length = 225
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 143/218 (65%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 14 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 73
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+C A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 74 LTLTKIIDARLKMYKHSNNKTMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAV 133
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PL++ +AV LV
Sbjct: 134 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHVPLTQDKAVQLV 187
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L I ++NK+GI + + LRKD
Sbjct: 188 KDVFISAAERDVYTGDALRICIINKEGISEQTIPLRKD 225
>gi|301108459|ref|XP_002903311.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
gi|262097683|gb|EEY55735.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
Length = 247
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 140/216 (64%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
W PYD NGGT +AIAG D+ V A DTR+STGYSILSRD SK+ +L V+ G D+
Sbjct: 37 WEPYDFNGGTVLAIAGEDFVVVAGDTRLSTGYSILSRDESKLHELTPTTVLGCPGSHNDI 96
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L+ +L+ R +YQH + M+ AM QLL NTLY +RFFPYY+F +L G+D GKG V
Sbjct: 97 IQLRGVLSIRAQMYQHDNETSMTSSAMSQLLMNTLYSRRFFPYYAFCILCGIDENGKGVV 156
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
YTYDA+GSY+RV ++QGSG L++P LDN ++ + D L+ E D++K
Sbjct: 157 YTYDAIGSYDRVTRAAQGSGGHLMIPLLDNLVEHDT-----RTDPKKALTLQETKDIIKD 211
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F +A ERDIYT + +EI+ + GI RE L+KD
Sbjct: 212 AFITAGERDIYTGDSVEILTIKASGIDREMFALKKD 247
>gi|151301141|ref|NP_001093092.1| proteasome beta subunit [Bombyx mori]
gi|95102764|gb|ABF51323.1| proteasome beta subunit [Bombyx mori]
Length = 232
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/223 (48%), Positives = 144/223 (64%), Gaps = 9/223 (4%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
KQH + PY +NGG+ VAIAG DY V ADTR+STG+SI +RD K+ KL++ V+ ++G
Sbjct: 17 KQH-RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 75
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
D L +LL AR +Y+H+HNK M+ PA+ Q+LS LYYKRFFPYY NVL GLD++
Sbjct: 76 CWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSD 135
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAE 180
GKGCVY+YD +G R + + GS + + P LDNQ+ L VT PL +
Sbjct: 136 GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIG------LKNMQNVTEAPLPREK 189
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+ L+K F SA ERDIYT + + I+++ GI E ELRKD
Sbjct: 190 ALALLKDVFISAAERDIYTGDSIYILIITASGIQEEKFELRKD 232
>gi|307214019|gb|EFN89226.1| Proteasome subunit beta type-1 [Harpegnathos saltator]
Length = 236
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 8/219 (3%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
++SPY +NGG+ VA+AG D+CV AADTR+STG+SI +R K+ L+ ++ SG D
Sbjct: 24 SFSPYADNGGSVVALAGDDFCVVAADTRLSTGFSIYTRQQDKLFPLSKTTILGCSGCWCD 83
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
L +LL+AR +Y+H+H K+MS PA Q+LS LYYKRFFPYY N+L GLD GKGC
Sbjct: 84 TLTLTRLLSARMQMYKHEHQKEMSTPATAQMLSTMLYYKRFFPYYVSNILAGLDENGKGC 143
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP--LSEAEAVDL 184
+Y+YD +G E+ Y + GS L+ P LDNQ+ + Q+ +TP L++ +AV +
Sbjct: 144 IYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKN------QEGITPVNLTQEKAVAI 197
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+K F SA ERDIYT + + I ++ KDGI LRKD
Sbjct: 198 LKDVFTSAAERDIYTGDGITIKIITKDGIQDISFALRKD 236
>gi|322796740|gb|EFZ19173.1| hypothetical protein SINV_12036 [Solenopsis invicta]
Length = 237
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 145/219 (66%), Gaps = 8/219 (3%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
++SPY +NGG+ VA+AG D+CV AADTR+STG+SI +R+ K+ L++ ++ SG D
Sbjct: 25 SFSPYSDNGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFSLSNTTILGCSGCWCD 84
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
L +LL+AR +Y+H+H K+MS PA Q+LS LY+KRFFPYY N+L GLD GKGC
Sbjct: 85 TLTLTRLLSARMQMYKHEHQKEMSTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKGC 144
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDL 184
+Y+YD +G E+ Y + GS L+ P LDNQ+ + Q+ V TP+++ +AV +
Sbjct: 145 IYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKN------QEGVTPTPVTQEKAVAI 198
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+K F SA ERDIYT + + I ++ KDGI LRKD
Sbjct: 199 LKDVFTSAAERDIYTGDGITIKIITKDGIKDSSFALRKD 237
>gi|307170452|gb|EFN62722.1| Proteasome subunit beta type-1 [Camponotus floridanus]
Length = 236
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 145/219 (66%), Gaps = 8/219 (3%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
++SPY +NGG+ VA+AG D+CV AADTR+STG+SI +R+ K+ L++ ++ SG D
Sbjct: 24 SFSPYSDNGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFPLSNTTILGCSGCWCD 83
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
L +LL+AR +Y+H+H K+M+ PA Q+LS LY+KRFFPYY N+L GLD GKGC
Sbjct: 84 TLTLTRLLSARMQMYKHEHQKEMTTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKGC 143
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP--LSEAEAVDL 184
+Y+YD +G E+ Y + GS L+ P LDNQ+ + Q+ VTP L++ +AV +
Sbjct: 144 IYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKN------QEGVTPAVLTQEKAVAI 197
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+K F SA ERDIYT + + I ++ KDGI LRKD
Sbjct: 198 LKDVFTSAAERDIYTGDGISIKIITKDGIKDSSFALRKD 236
>gi|414886160|tpg|DAA62174.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 152
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 109/120 (90%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGTCVAIAGADYCV AADTR+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGK C +T+
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKVCCFTF 128
>gi|348674011|gb|EGZ13830.1| hypothetical protein PHYSODRAFT_286698 [Phytophthora sojae]
Length = 247
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 140/216 (64%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
W PYD NGGT +AIAG D+ V A DTR+STGYS+LSR+ SK+ +L V+ G D+
Sbjct: 37 WEPYDFNGGTVLAIAGEDFVVVAGDTRLSTGYSVLSREESKLHQLTPTSVLGCPGSHNDI 96
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L+ +L+ R +YQH + MS AM QLL NTLY +RFFPYY+F +L G+D GKG V
Sbjct: 97 IQLRGVLSIRAQMYQHDNETAMSSSAMAQLLMNTLYSRRFFPYYAFCILCGIDENGKGAV 156
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
YTYDA+GSY+RV ++QGSG L++P LDN ++ + D LS E D++K
Sbjct: 157 YTYDAIGSYDRVTRAAQGSGGHLMIPLLDNLVEHDT-----RTDPKKTLSLQETKDIIKD 211
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F +A ERDIYT + +EI+ + GI RE L+KD
Sbjct: 212 AFITAGERDIYTGDSVEILTIKASGIAREVFALKKD 247
>gi|47217169|emb|CAG11005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 142/218 (65%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYTFNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK MS A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ D V PL++ +A+ LV
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMDGVQQVPLTQEKAIQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L I ++ K+GI + ++LRKD
Sbjct: 200 KDVFISAAERDVYTGDALHICIITKEGIQEQTVQLRKD 237
>gi|332019508|gb|EGI59987.1| Proteasome subunit beta type-1 [Acromyrmex echinatior]
Length = 237
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 144/218 (66%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGG+ VA+AG D+CV AADTR+STG++I +R+ K+ L+D ++ SG D
Sbjct: 26 FNPYSDNGGSVVALAGDDFCVIAADTRLSTGFTIHTRNQDKLFPLSDTTILGCSGCWCDT 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L +LL+AR +Y+H+H K+MS PA Q+LS LY+KRFFPYY N+L GLD GKGC+
Sbjct: 86 TTLTRLLSARMQMYKHEHQKEMSTPATAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCI 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y+YD +G E+ Y + GS L+ P LDNQ+ + Q+ VT PL++ +A+ ++
Sbjct: 146 YSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKN------QEGVTPAPLTQEKAIAIL 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERDIYT + + I ++ KDGI LRKD
Sbjct: 200 KDVFTSAAERDIYTGDGITIKIITKDGIEISSFALRKD 237
>gi|294942317|ref|XP_002783482.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239895942|gb|EER15278.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 242
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 143/216 (66%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGTC+A+ GADYCV + D R+S GYSI +R+ SKI KL ++CV+ +SG AD
Sbjct: 31 FNPYVDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITTSGMLADQ 90
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K+L R Y H+H ++ + A+ Q+LSN LYYKRFFPYY+FN++ G+D G+G V
Sbjct: 91 ITLHKVLKNRVARYVHEHRREPTIGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGQGKV 150
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YDA+GS+E + +QGSGS+L+ LDNQL L + L+E + V+L K
Sbjct: 151 YGYDAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHE----ALTEGQMVELCKD 206
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ASATERDI+T + + ++ GI + ELRKD
Sbjct: 207 VIASATERDIHTGDSNTVCTIDTTGIKIQTFELRKD 242
>gi|326915585|ref|XP_003204095.1| PREDICTED: proteasome subunit beta type-1-like [Meleagris
gallopavo]
Length = 237
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 144/217 (66%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+C+ A+DTR+S GY+I SRD K KL + V+ SGF D
Sbjct: 26 FSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYKLTEHTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PL+ +A+ LVK
Sbjct: 146 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIGFKN-----MQNVEHVPLTLEKALQLVK 200
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I V+ KDGI E ++LRKD
Sbjct: 201 DVFISAAERDVYTGDALKICVVTKDGIKEETIQLRKD 237
>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
Length = 237
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 145/217 (66%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+C+ A+DTR+S GY+I SRD K +L ++ V+ SGF D
Sbjct: 26 FSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYRLTEQTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PL+ +A+ LVK
Sbjct: 146 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIGFKN-----MQNVEHVPLTLEKALQLVK 200
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I V+ KDGI E ++LRKD
Sbjct: 201 DVFISAAERDVYTGDALKICVVTKDGIKEETIQLRKD 237
>gi|388507486|gb|AFK41809.1| unknown [Medicago truncatula]
Length = 158
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 97/112 (86%), Positives = 104/112 (92%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
MTKQH WSPYDNNGG+CVAIAG+DYCV AADTRMSTGY+IL+RDYSKI LA+KCVMA
Sbjct: 1 MTKQHANWSPYDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMAP 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYS 112
SGFQADVKALQK+L+ARHL YQHQHNKQMSCPAM QLLSNTLYYKRFFPYYS
Sbjct: 61 SGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYS 112
>gi|389611001|dbj|BAM19111.1| proteasome 26kD subunit [Papilio polytes]
Length = 232
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 143/218 (65%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY +NGG+ VAIAG DY V ADTR+STG+SI +R+ K+ KL+++ V+ ++G D
Sbjct: 21 FEPYADNGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCWCDT 80
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L +LL AR +Y+H+HNK M+ PA+ Q+LS LYYKRFFPYY N+L GLD +GKGC+
Sbjct: 81 LTLTRLLQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDADGKGCI 140
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y+YD +G ER Y + GS + P LDNQ+ L VT P+ + +A+ L+
Sbjct: 141 YSYDPIGHCERSTYRAGGSAGAQLQPLLDNQIG------LKNMQNVTEAPVPKEKALALL 194
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERDIYT + + I+++ +GI E ELRKD
Sbjct: 195 KDVFISAAERDIYTGDCIYIIIITANGIQEEKFELRKD 232
>gi|346472379|gb|AEO36034.1| hypothetical protein [Amblyomma maculatum]
Length = 232
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 145/216 (67%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGG+ VAIAG D+ V A+D+R+STGYSI +R+ SK+ KL+++CV+ S+G D+
Sbjct: 21 FSPYSENGGSIVAIAGEDFAVIASDSRLSTGYSIYTREQSKLFKLSNQCVLGSTGCWCDI 80
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+ L AR +Y H+H++ MS PA+ QL+ LY KRFFPYY N+L GLD +GKGC+
Sbjct: 81 LTFTRFLEARMKMYLHEHHRLMSTPAVAQLVVTMLYNKRFFPYYISNILAGLDEDGKGCI 140
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YD VG ERV Y + GS S L+ P LDNQ+ + + + V P E AV+++K
Sbjct: 141 YCYDPVGHCERVQYRAGGSSSALLQPLLDNQIGFKN---MENVELVPPTRE-RAVNIIKD 196
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F S+ ERDIYT + + I +++K+GI E + LR+D
Sbjct: 197 VFISSAERDIYTGDSVVINIIDKNGIKEEMLALRRD 232
>gi|348534148|ref|XP_003454565.1| PREDICTED: proteasome subunit beta type-1-A-like [Oreochromis
niloticus]
Length = 237
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 144/216 (66%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + + V PL++ +AV LVK
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MEGVEHV-PLTKDKAVQLVKD 201
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I V+ K+GI+ E + LRKD
Sbjct: 202 VFISAAERDVYTGDALRICVITKEGINEETIPLRKD 237
>gi|389609037|dbj|BAM18130.1| proteasome 26kD subunit [Papilio xuthus]
Length = 232
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 144/217 (66%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY +NGG+ VAIAG DY V ADTR+STG+SI +R+ K+ KL+++ V+ ++G D
Sbjct: 21 FEPYADNGGSVVAIAGEDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCWCDT 80
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L +LL AR +Y+H+HNK M+ PA+ Q+LS LYYKRFFPYY N+L GLD +GKGC+
Sbjct: 81 LTLTRLLQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDADGKGCI 140
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD-AVTPLSEAEAVDLVK 186
Y+YD +G ER Y + GS + P LDNQ+ L Q+ + P+ + +A+ L+K
Sbjct: 141 YSYDPIGHCERSTYRAGGSAGAQLQPLLDNQIG-----LKNMQNVSEAPVPKEKALALLK 195
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERDIYT + + I+++ +GI E ELRKD
Sbjct: 196 DVFISAAERDIYTGDCIYIIIITANGIQEEKFELRKD 232
>gi|225704042|gb|ACO07867.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 141/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PLS+ +AV LV
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHLPLSQEKAVQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L I ++ KDGI E + LRKD
Sbjct: 200 KDVFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|209734840|gb|ACI68289.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 140/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ V A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAVVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PLS+ +AV LV
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHLPLSQEKAVQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L I ++ KDGI E LRKD
Sbjct: 200 KDVFISAAERDVYTGDALRICIVTKDGIKEETFPLRKD 237
>gi|225705074|gb|ACO08383.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 141/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PLS+ +AV LV
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHLPLSQEKAVQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L I ++ KDGI E + LRKD
Sbjct: 200 KDVFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|17380207|sp|Q9IB84.1|PSB1A_CARAU RecName: Full=Proteasome subunit beta type-1-A; AltName: Full=20S
proteasome beta-6 subunit A; Short=B6-A
gi|7768839|dbj|BAA95591.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 238
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 144/216 (66%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 27 FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 86
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG+G V
Sbjct: 87 LTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAV 146
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + + V PLS+ +AV LVK
Sbjct: 147 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MENVEQV-PLSQEKAVQLVKD 202
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ K+GI E + LRKD
Sbjct: 203 VFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238
>gi|17380206|sp|Q9IB83.1|PSB1B_CARAU RecName: Full=Proteasome subunit beta type-1-B; AltName: Full=20S
proteasome beta-6 subunit B; Short=B6-B
gi|7768841|dbj|BAA95592.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 237
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 144/216 (66%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG+G V
Sbjct: 86 LTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + + V PLS+ +AV LVK
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MENVEQV-PLSQEKAVQLVKD 201
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ K+GI E + LRKD
Sbjct: 202 VFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 237
>gi|72537676|gb|AAZ73764.1| 20S proteasome beta subunit [Cirrhinus molitorella]
Length = 237
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 143/216 (66%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG+G V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + + V PL+ +AV LVK
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MENVEEV-PLTLEKAVQLVKD 201
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + LEI ++ K+GI E + LRKD
Sbjct: 202 VFISAAERDVYTGDALEICIITKEGIREEIVPLRKD 237
>gi|225716016|gb|ACO13854.1| Proteasome subunit beta type-1-A [Esox lucius]
Length = 237
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 141/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG+G V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PLS+ +A+ LV
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHLPLSQEKALQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L I ++ KDGI E + LRKD
Sbjct: 200 KDVFISAAERDVYTGDALRICIVTKDGIKEENVPLRKD 237
>gi|91092850|ref|XP_968855.1| PREDICTED: similar to proteasome beta subunit [Tribolium castaneum]
gi|270003046|gb|EEZ99493.1| hypothetical protein TcasGA2_TC000069 [Tribolium castaneum]
Length = 235
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 145/222 (65%), Gaps = 6/222 (2%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASS 61
T+ H +SPY +NGG+ VAIAG D+ V ADTR+S G+SI +RD +K+ +L+D V+ S
Sbjct: 20 TQHH--FSPYADNGGSVVAIAGDDFVVIGADTRLSAGFSIYTRDQNKLFRLSDTTVLGCS 77
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
G D L ++L+AR +YQ +HNK M+ PA Q+LS LYYKRFFPYY N+L GLDN
Sbjct: 78 GCWCDTLTLTRILSARMQMYQQEHNKTMATPACAQMLSTMLYYKRFFPYYISNILVGLDN 137
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181
EGKGC+Y+YD +G E+ Y + GS L+ P LDNQ+ + + +D+ L A A
Sbjct: 138 EGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGLKN--MQNVKDSKLTLERAAA 195
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ +K F SA ERDI+T + + I ++ KDGI + +LRKD
Sbjct: 196 I--IKDVFISAAERDIFTGDNILINIITKDGIKEDSFQLRKD 235
>gi|197129775|gb|ACH46273.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 146/220 (66%), Gaps = 4/220 (1%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH +SPY NGGT +AIAG D+C+ A+DTR+S GYSI SRD K KL ++ V+ +GF
Sbjct: 23 QHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGF 82
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D L K++ A +Y+H + K M+ A+ +LS LY +RFFPYY +N++GGLD EG
Sbjct: 83 HGDCLTLTKIIEAGGEMYKHSNFKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 142
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY++D VGSYER + + GS S ++ P LDNQ+ + + + V PL+ +A+
Sbjct: 143 KGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKN---MQNVEHV-PLTLEKALQ 198
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LVK F SA ERD+YT + L+I ++ KDGI + ++LRKD
Sbjct: 199 LVKDVFISAAERDVYTGDALKICIVTKDGIKEQSIQLRKD 238
>gi|126311312|ref|XP_001381658.1| PREDICTED: proteasome subunit beta type-1-like [Monodelphis
domestica]
Length = 244
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 33 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 92
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 93 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 152
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 153 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLERAMQLVK 207
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ KDGI E + LRKD
Sbjct: 208 DVFISAAERDVYTGDSLKICIVTKDGIKEETIPLRKD 244
>gi|410912074|ref|XP_003969515.1| PREDICTED: proteasome subunit beta type-1-B-like [Takifugu
rubripes]
Length = 237
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 142/216 (65%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYAFNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK MS A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + Q PLS+ +A+ LVK
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN--MENVQQ--VPLSQEKAIQLVKD 201
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI + + LRKD
Sbjct: 202 VFISAAERDVYTGDALRICIITKEGIKEQTIPLRKD 237
>gi|349805257|gb|AEQ18101.1| putative proteasome beta 1 subunit [Hymenochirus curtipes]
Length = 205
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 142/209 (67%), Gaps = 4/209 (1%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
GGT +A+AG D+ + A+DTR+S GYSI SR+ K KL DK V+ SGF AD L K++
Sbjct: 1 GGTVLALAGEDFAIVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCSGFHADCLTLTKII 60
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG VY++D VG
Sbjct: 61 EARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVG 120
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
SY+R Y + GS S ++ P LDNQ+ + +P + V PL+ +A+ LVK F SATE
Sbjct: 121 SYQRDAYKAGGSASAMLQPLLDNQIGYKN---MPNAEQV-PLTLEKAIKLVKDVFISATE 176
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELRKD 223
RD+YT + L+I ++ K+GI E + LRKD
Sbjct: 177 RDVYTGDSLKISIVTKEGIREESLSLRKD 205
>gi|51468069|ref|NP_001003889.1| proteasome subunit beta type-1 [Danio rerio]
gi|49619079|gb|AAT68124.1| proteasome beta-subunit C5 [Danio rerio]
gi|55715844|gb|AAH85580.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Danio rerio]
gi|182891728|gb|AAI65077.1| Psmb1 protein [Danio rerio]
Length = 237
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 145/216 (67%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG+G V
Sbjct: 86 LTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + + V PL++ +AV LVK
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MENVEHV-PLTQEKAVQLVKD 201
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L++ +++K+GI E + LRKD
Sbjct: 202 VFISAAERDVYTGDALKVCIVSKEGIKEEIVPLRKD 237
>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 141/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L +++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTEIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PLS+ +AV LV
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHLPLSQEKAVQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L I ++ KDGI E + LRKD
Sbjct: 200 KDVFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|66512107|ref|XP_395163.2| PREDICTED: proteasome subunit beta type-1 [Apis mellifera]
Length = 236
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 141/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGG+ +A+AG ++CV AADTR+STG+SI +R+ K+ L+ K V+ SG D
Sbjct: 25 FNPYADNGGSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLFPLSSKTVLGCSGCWCDT 84
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L ++L+AR +Y+H+H K+M PA+ Q+LS LYYKRFFPYY N+LGGLD GKGCV
Sbjct: 85 LTLTRILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGKGCV 144
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLV 185
Y+YD +G E Y + GS L+ P LDNQ+ + Q+ V PL++ AV ++
Sbjct: 145 YSYDPIGHCEITKYRAGGSAGALLQPLLDNQIGYKN------QEGVESVPLTQERAVAII 198
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERDIYT + + I ++ DGI LRKD
Sbjct: 199 KDVFTSAAERDIYTGDSIFIKIITSDGIQNFNFALRKD 236
>gi|395535314|ref|XP_003769673.1| PREDICTED: proteasome subunit beta type-1 [Sarcophilus harrisii]
Length = 244
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 33 FSPYVFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 92
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 93 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 152
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 153 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHIPLSLERAMQLVK 207
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ KDGI E + LRKD
Sbjct: 208 DVFISAAERDVYTGDSLKICIVTKDGIKEETVPLRKD 244
>gi|427787323|gb|JAA59113.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Rhipicephalus pulchellus]
Length = 232
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 143/216 (66%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY NGG+ VA+AG D+ V A+D+R+S+GY I +R+ SK+ KL+++CV+ S+G D+
Sbjct: 21 FNPYSENGGSIVAVAGDDFAVIASDSRLSSGYHIHTREQSKLFKLSNQCVLGSTGCWCDI 80
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+ L AR +Y H+H+K MS PA+ QL+ LY KRFFPYY N+L GLD EGKGC+
Sbjct: 81 LTFTRFLEARMKMYLHEHHKLMSTPAVAQLIVTMLYNKRFFPYYISNILAGLDEEGKGCI 140
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YD VG ERV Y + GS S L+ P LDNQ+ + + + P + AV+++K
Sbjct: 141 YCYDPVGHSERVQYRAGGSSSALLQPLLDNQIGFKNMENVKPE----PPTRERAVNIIKD 196
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERDIYT + + I +++KDGI + M LR+D
Sbjct: 197 VFISAAERDIYTGDSVIIHIIDKDGIKEDKMPLRRD 232
>gi|452821727|gb|EME28754.1| 20S proteasome subunit beta 6 [Galdieria sulphuraria]
Length = 232
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 143/221 (64%), Gaps = 4/221 (1%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q P + PY NNGGT VAI G DYC+ +A TR+ G++I +R+ + L ++ V+A++G
Sbjct: 15 QRPDFMPYQNNGGTVVAIGGEDYCIVSATTRLGLGFAIPTRNVCRYSILNNRVVLATAGM 74
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD L K++ AR IY+ Q +K + QLLSNTLYY+RFFPYY+FNVLGGLD +G
Sbjct: 75 FADTATLHKVIKARVKIYEEQQDKPFGLHSAAQLLSNTLYYRRFFPYYTFNVLGGLDEDG 134
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
+G VY +DA+GS E+V G+G LI P LDNQ++ +T LS EAVD
Sbjct: 135 QGFVYGFDAIGSGEKVKVVCNGTGQALIQPILDNQVEKKQQY---ENKQITKLSLQEAVD 191
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKD-GIHREYMELRKD 223
L+K F SA ERDIYT + ++I ++ K+ G+ E +L++D
Sbjct: 192 LIKDVFTSAGERDIYTGDAIDICIITKEKGVLVETFQLKQD 232
>gi|195016569|ref|XP_001984439.1| GH16458 [Drosophila grimshawi]
gi|193897921|gb|EDV96787.1| GH16458 [Drosophila grimshawi]
Length = 235
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 145/220 (65%), Gaps = 2/220 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH +SPY++NGG+ VAIAG D+ V AADTR+S+GYSI SRD SK+ KL+ V+ S+G
Sbjct: 18 QHVDFSPYESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKLSPHTVLGSTGC 77
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D +L L+ R +Y+H H K M+ A+ Q+LS +Y +RFFPYY N+L GLD +G
Sbjct: 78 WCDTLSLTGLMKVRMQMYEHTHMKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDG 137
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY+YD +G ER Y + G+ +L+ P LDNQ+ + L A D + PL++ AV
Sbjct: 138 KGVVYSYDPIGHCERATYRAGGTAGSLLQPVLDNQIGYKNQNL--AADQLPPLTKDRAVS 195
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ F SA ERDIYT + + I ++ KDGI ++ ++LRKD
Sbjct: 196 VASDTFISAAERDIYTGDSVLINIITKDGIEQKTLQLRKD 235
>gi|225707182|gb|ACO09437.1| Proteasome subunit beta type 1-A [Osmerus mordax]
Length = 237
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 142/216 (65%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD +G+G V
Sbjct: 86 PTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEQGRGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + Q PLS+ +AV LVK
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN--MENVQH--LPLSQEKAVQLVKD 201
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 202 VFISAAERDVYTGDALRICIITKEGIKEETVPLRKD 237
>gi|432852541|ref|XP_004067299.1| PREDICTED: proteasome subunit beta type-1-B-like [Oryzias latipes]
Length = 237
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 143/216 (66%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD +GKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEQGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + + V PL++ +AV LVK
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MEGVEHV-PLTKDKAVQLVKD 201
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI + + LRKD
Sbjct: 202 VFVSAAERDVYTGDALRICIVTKEGIEEQNIPLRKD 237
>gi|348561415|ref|XP_003466508.1| PREDICTED: proteasome subunit beta type-1-like [Cavia porcellus]
Length = 241
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL D+ V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ KDGI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALKICIVTKDGIREETIPLRKD 241
>gi|209732446|gb|ACI67092.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 141/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL + V+ SGF D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PL++ +AV LV
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHLPLNQEKAVQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 200 KDVFISAAERDVYTGDALRICIVTKEGIKEETVPLRKD 237
>gi|149744029|ref|XP_001499422.1| PREDICTED: proteasome subunit beta type-1-like [Equus caballus]
Length = 241
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S GYSI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTILAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMGLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|417397679|gb|JAA45873.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Desmodus rotundus]
Length = 240
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI SRD K KL DK V+ SGF D
Sbjct: 29 FSPYAFNGGTILAIAGEDFSIVASDTRLSEGFSIHSRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 148
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PL+ A+ LVK
Sbjct: 149 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLTLDRAMRLVK 203
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ KDGI E + LR+D
Sbjct: 204 DVFISAAERDVYTGDTLKICIVTKDGIREETVPLRRD 240
>gi|402868791|ref|XP_003898471.1| PREDICTED: proteasome subunit beta type-1 [Papio anubis]
Length = 241
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETIPLRKD 241
>gi|296199648|ref|XP_002747247.1| PREDICTED: proteasome subunit beta type-1-like [Callithrix jacchus]
Length = 241
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETLPLRKD 241
>gi|73974057|ref|XP_532275.2| PREDICTED: proteasome subunit beta type-1 [Canis lupus familiaris]
Length = 241
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 142/221 (64%), Gaps = 6/221 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q +SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF
Sbjct: 26 QQLRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGF 85
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG
Sbjct: 86 HGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 145
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAV 182
KG VY++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+
Sbjct: 146 KGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAM 200
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LVK F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 201 RLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|384944338|gb|AFI35774.1| proteasome subunit beta type-1 precursor [Macaca mulatta]
Length = 241
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|4506193|ref|NP_002784.1| proteasome subunit beta type-1 [Homo sapiens]
gi|114610308|ref|XP_001140101.1| PREDICTED: proteasome subunit beta type-1 isoform 4 [Pan
troglodytes]
gi|332825501|ref|XP_003311646.1| PREDICTED: proteasome subunit beta type-1 [Pan troglodytes]
gi|397502108|ref|XP_003821710.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pan paniscus]
gi|397502110|ref|XP_003821711.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pan paniscus]
gi|397502112|ref|XP_003821712.1| PREDICTED: proteasome subunit beta type-1 isoform 3 [Pan paniscus]
gi|130853|sp|P20618.2|PSB1_HUMAN RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|220026|dbj|BAA00658.1| proteasome subunit C5 [Homo sapiens]
gi|18088777|gb|AAH20807.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|54696306|gb|AAV38525.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|61357229|gb|AAX41355.1| proteasome subunit beta type 1 [synthetic construct]
gi|197692325|dbj|BAG70126.1| proteasome beta 1 subunit [Homo sapiens]
gi|197692585|dbj|BAG70256.1| proteasome beta 1 subunit [Homo sapiens]
gi|261860708|dbj|BAI46876.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|410210668|gb|JAA02553.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410259166|gb|JAA17549.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410301642|gb|JAA29421.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410335833|gb|JAA36863.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
Length = 241
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|12653473|gb|AAH00508.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|157928354|gb|ABW03473.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|157928990|gb|ABW03780.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
Length = 241
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|54696302|gb|AAV38523.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|54696304|gb|AAV38524.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|61367228|gb|AAX42969.1| proteasome subunit beta type 1 [synthetic construct]
gi|61367236|gb|AAX42970.1| proteasome subunit beta type 1 [synthetic construct]
Length = 242
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|354486298|ref|XP_003505318.1| PREDICTED: proteasome subunit beta type-1-like [Cricetulus griseus]
Length = 240
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 148
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 149 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 203
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 204 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|386781057|ref|NP_001247565.1| proteasome subunit beta type-1 [Macaca mulatta]
gi|355562210|gb|EHH18842.1| hypothetical protein EGK_15528 [Macaca mulatta]
gi|355749047|gb|EHH53530.1| hypothetical protein EGM_14190 [Macaca fascicularis]
gi|380788877|gb|AFE66314.1| proteasome subunit beta type-1 [Macaca mulatta]
Length = 241
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|195375426|ref|XP_002046502.1| GJ12457 [Drosophila virilis]
gi|194153660|gb|EDW68844.1| GJ12457 [Drosophila virilis]
Length = 235
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 144/220 (65%), Gaps = 2/220 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH +SPY++NGG+ VAIAG D+ V AADTR+S+GYSI SRD SK+ K++ K V+ S+G
Sbjct: 18 QHVDFSPYESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKMSPKTVLGSTGC 77
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D +L L+ R +Y+H H K MS A+ Q+LS +Y +RFFPYY N+L GLD +G
Sbjct: 78 WCDTLSLTGLVKVRMQMYEHTHMKTMSTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDG 137
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY+YD +G ER Y + G+ L+ P LDNQ+ + LPA D + PL++ AV
Sbjct: 138 KGAVYSYDPIGHCERATYRAGGTAGALLQPVLDNQIGYKNQ-NLPA-DQLPPLTKERAVA 195
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ F SA ERDIYT + + I ++ KDG+ ++LRKD
Sbjct: 196 VASDTFISAAERDIYTGDSVLINIITKDGVEERKLQLRKD 235
>gi|301779700|ref|XP_002925260.1| PREDICTED: proteasome subunit beta type-1-like [Ailuropoda
melanoleuca]
gi|281351745|gb|EFB27329.1| hypothetical protein PANDA_014727 [Ailuropoda melanoleuca]
Length = 241
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S GYS+ +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSVHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|410960369|ref|XP_003986764.1| PREDICTED: proteasome subunit beta type-1 [Felis catus]
Length = 241
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S GYSI +RD K +L DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYRLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALKICIVTKEGIREETVPLRKD 241
>gi|148227103|ref|NP_001080435.1| proteasome beta 1 subunit [Xenopus laevis]
gi|27694605|gb|AAH43739.1| Psmb1-prov protein [Xenopus laevis]
gi|114107802|gb|AAI23122.1| Psmb1 protein [Xenopus laevis]
Length = 239
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 142/216 (65%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY NGGT +A+AG D+ + A+DTR+S GYSI SR+ K KL DK V+ +GF AD
Sbjct: 28 FNPYTFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCTGFHADC 87
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 88 LTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 147
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + PL+ +A+ L+K
Sbjct: 148 YSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEQ----LPLTLEKALKLIKD 203
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ KDG+ E + LRKD
Sbjct: 204 VFISAAERDVYTGDALHISIVTKDGVREESISLRKD 239
>gi|296483812|tpg|DAA25927.1| TPA: proteasome beta 1 subunit precursor [Bos taurus]
Length = 241
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L++ ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALKVCIVTKEGIREETVPLRKD 241
>gi|432114954|gb|ELK36597.1| Proteasome subunit beta type-1 [Myotis davidii]
Length = 240
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 148
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 149 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 203
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 204 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|21465654|pdb|1IRU|M Chain M, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465668|pdb|1IRU|1 Chain 1, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 213
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 2 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 61
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 62 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 121
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R + + GS S ++ P LDNQ+ + + PLS A+ LVK
Sbjct: 122 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH----VPLSLDRAMRLVKD 177
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 178 VFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 213
>gi|297678538|ref|XP_002817127.1| PREDICTED: proteasome subunit beta type-1-like [Pongo abelii]
gi|297679681|ref|XP_002817653.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pongo abelii]
Length = 241
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYVFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|403305890|ref|XP_003943482.1| PREDICTED: proteasome subunit beta type-1 [Saimiri boliviensis
boliviensis]
Length = 241
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|225705308|gb|ACO08500.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 236
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 140/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL + V+ SGF D
Sbjct: 25 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVIGCSGFHGDC 84
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 85 LTLTKIIDARLKMYKHSNNKSMTSGAIAATLSTILYGRRFFPYYVYNIIGGLDEEGKGAV 144
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PL++ +AV LV
Sbjct: 145 YSFDPVGSYQRGTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHLPLNQEKAVQLV 198
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 199 KDVFISAAERDVYTGDALRICIVTKEGIKEETVPLRKD 236
>gi|387017846|gb|AFJ51041.1| Proteasome subunit beta type-1-like [Crotalus adamanteus]
Length = 239
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 139/218 (63%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ V A+DTR+S Y+I SR+ K KL D V+ SGF D
Sbjct: 28 FSPYTFNGGTILAIAGEDFVVVASDTRLSEDYAIHSRNSPKCYKLTDTTVIGCSGFHGDC 87
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K+L AR +Y+H +NK MS A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 88 LTLTKILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 147
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y++D VGSY+R + + GS S ++ P LDNQ+ L V PLS +A+ LV
Sbjct: 148 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVG------LKNMQGVKQLPLSLEKALQLV 201
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L+I V+ KDGI E LR+D
Sbjct: 202 KDVFISAAERDVYTGDALKICVITKDGIKEESFPLRRD 239
>gi|440894478|gb|ELR46920.1| Proteasome subunit beta type-1, partial [Bos grunniens mutus]
Length = 241
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L++ ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALKVCIVTKEGIREETVPLRKD 241
>gi|431904620|gb|ELK10002.1| Proteasome subunit beta type-1 [Pteropus alecto]
Length = 241
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHIPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L++ ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALKVCIVTKEGIREETIPLRKD 241
>gi|346986249|ref|NP_001231282.1| proteasome subunit beta type-1 [Sus scrofa]
Length = 241
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+G+ E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGVREETVPLRKD 241
>gi|426235057|ref|XP_004011507.1| PREDICTED: proteasome subunit beta type-1 [Ovis aries]
Length = 241
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L + ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRVCIVTKEGIREETVPLRKD 241
>gi|332264007|ref|XP_003281040.1| PREDICTED: proteasome subunit beta type-1 [Nomascus leucogenys]
Length = 241
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+S+ +RD K KL DK V+ SGF D
Sbjct: 30 FSPYVFNGGTVLAIAGEDFAIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|62897947|dbj|BAD96913.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 241
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K +L DK V+ SGF D
Sbjct: 30 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|37231712|gb|AAH58455.1| Proteasome (prosome, macropain) subunit, beta type 1 [Rattus
norvegicus]
gi|149047099|gb|EDL99819.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_a
[Rattus norvegicus]
Length = 240
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 148
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PL+ A+ LVK
Sbjct: 149 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLTLDRAMRLVK 203
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 204 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|221117643|ref|XP_002165958.1| PREDICTED: proteasome subunit beta type-1-A-like [Hydra
magnipapillata]
Length = 226
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 142/216 (65%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY + GG+ +AIAG D+ V A+DTR+S G+ I SR+ K +L D ++ S GF DV
Sbjct: 15 FSPYSSQGGSLLAIAGEDFAVIASDTRLSEGFLIHSRNIPKTYQLTDTTILGSCGFHGDV 74
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K + R ++Y+H+H K MSC ++ Q+LS TLYYKRFFPYY++N++ GLD++GKG +
Sbjct: 75 LTLTKNIKTRLVMYEHEHFKTMSCSSIAQMLSTTLYYKRFFPYYTYNIIAGLDSDGKGAI 134
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSYER Y + GS S ++ FLDNQ+ + A+ + PLS V+L+K
Sbjct: 135 YSFDPVGSYERETYRAGGSCSAMLQSFLDNQIGQKN----LAKKSDIPLSLERCVELIKD 190
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERDI T + + I ++ K+G E LR+D
Sbjct: 191 VFISAAERDIETGDGVLISIITKEGTKSEVFPLRRD 226
>gi|84370111|ref|NP_001033628.1| proteasome subunit beta type-1 precursor [Bos taurus]
gi|108860905|sp|Q2TBX6.1|PSB1_BOVIN RecName: Full=Proteasome subunit beta type-1; Flags: Precursor
gi|83638719|gb|AAI09495.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Bos taurus]
Length = 241
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L++ ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALKVCIVTKEGIRGETVPLRKD 241
>gi|378792314|pdb|3UNB|L Chain L, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792328|pdb|3UNB|Z Chain Z, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792342|pdb|3UNB|NN Chain n, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792356|pdb|3UNB|2 Chain 2, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792370|pdb|3UNE|L Chain L, Mouse Constitutive 20s Proteasome
gi|378792384|pdb|3UNE|Z Chain Z, Mouse Constitutive 20s Proteasome
gi|378792398|pdb|3UNE|NN Chain n, Mouse Constitutive 20s Proteasome
gi|378792412|pdb|3UNE|2 Chain 2, Mouse Constitutive 20s Proteasome
gi|378792426|pdb|3UNF|L Chain L, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792440|pdb|3UNF|Z Chain Z, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792454|pdb|3UNH|L Chain L, Mouse 20s Immunoproteasome
gi|378792468|pdb|3UNH|Z Chain Z, Mouse 20s Immunoproteasome
Length = 213
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 142/216 (65%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 2 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 61
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 62 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 121
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R + + GS S ++ P LDNQ+ + + + V PL+ A+ LVK
Sbjct: 122 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN---MQNVEHV-PLTLDRAMRLVKD 177
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 178 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 213
>gi|7242197|ref|NP_035315.1| proteasome subunit beta type-1 precursor [Mus musculus]
gi|2499837|sp|O09061.1|PSB1_MOUSE RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|1165122|emb|CAA56701.1| component C5 of proteasome [Mus musculus]
gi|1698584|gb|AAB37251.1| proteasome beta-subunit C5 [Mus musculus]
gi|17390820|gb|AAH18351.1| Proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
gi|26346380|dbj|BAC36841.1| unnamed protein product [Mus musculus]
gi|39754751|gb|AAR30867.1| proteasome beta-subunit C5 [Mus musculus]
gi|74198429|dbj|BAE39698.1| unnamed protein product [Mus musculus]
gi|74205097|dbj|BAE21005.1| unnamed protein product [Mus musculus]
gi|148688516|gb|EDL20463.1| proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
Length = 240
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 148
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PL+ A+ LVK
Sbjct: 149 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLTLDRAMRLVK 203
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 204 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|1165123|emb|CAA56702.1| component C5 of proteasome [Mus musculus]
Length = 225
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 14 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 73
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 74 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 133
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PL+ A+ LVK
Sbjct: 134 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLTLDRAMRLVK 188
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 189 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 225
>gi|449278062|gb|EMC86029.1| Proteasome subunit beta type-1 [Columba livia]
Length = 237
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 143/217 (65%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S GY+I RD K KL ++ V+ SGF D
Sbjct: 26 FSPYTFNGGTVLAIAGEDFSLVASDTRLSEGYAIHCRDSPKCYKLTERTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PL+ +A+ LVK
Sbjct: 146 YSFDPVGSYQRDSFKAAGSASAMLQPLLDNQIGFKN-----MQNVEHLPLTLEKALQLVK 200
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ KDGI E ++LRKD
Sbjct: 201 DVFISAAERDVYTGDALKICIVTKDGIKEETVQLRKD 237
>gi|351714661|gb|EHB17580.1| Proteasome subunit beta type-1 [Heterocephalus glaber]
Length = 240
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 143/221 (64%), Gaps = 7/221 (3%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH +SPY NGGT +AIAG D+ + A+DTR+S G+SI +R+ K KL DK V+ SGF
Sbjct: 26 QH-RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRNSPKCYKLTDKTVIGCSGF 84
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG
Sbjct: 85 HGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 144
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAV 182
KG VY++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+
Sbjct: 145 KGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAM 199
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LVK F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 200 RLVKDVFISAAERDVYTGDALRICIVTKEGIREETIPLRKD 240
>gi|45360639|ref|NP_988993.1| proteasome beta 1 subunit [Xenopus (Silurana) tropicalis]
gi|38174388|gb|AAH61284.1| proteasome (prosome, macropain) subunit, beta type, 1 [Xenopus
(Silurana) tropicalis]
gi|89272031|emb|CAJ83174.1| proteasome (prosome macropain) subunit beta type 1 [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 141/216 (65%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY NGGT +A+AG D+ + A+DTR+S GYSI SR+ K KL D V+ +GF AD
Sbjct: 28 FNPYTFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDNTVIGCTGFHADC 87
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 88 LTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 147
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + PL+ +A+ L+K
Sbjct: 148 YSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEQ----LPLTLEKALKLIKD 203
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ KDGI E + LRKD
Sbjct: 204 VFISAAERDVYTGDALHISIVTKDGIREESVSLRKD 239
>gi|226372486|gb|ACO51868.1| Proteasome subunit beta type-1-A [Rana catesbeiana]
Length = 240
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 141/216 (65%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S YSI SR+ K KL DK V+ SGF D
Sbjct: 29 FSPYTFNGGTVLALAGEDFALVASDTRLSEDYSIHSRNTPKCYKLTDKTVIGCSGFHGDC 88
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 89 LTLTKIIEARLKMYKHSNNKTMTSNAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 148
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R Y + GS S ++ P LDNQ+ + + PL+ +A+ LVK
Sbjct: 149 YSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEH----LPLTLEKALQLVKD 204
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ KDGI E + LRKD
Sbjct: 205 VFISAAERDVYTGDALKISIVTKDGIKEESIPLRKD 240
>gi|67475302|ref|XP_653346.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56470287|gb|EAL47959.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
Length = 226
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 136/214 (63%), Gaps = 10/214 (4%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
K WSPY++N GTCV I G D+ V A+DTRMS Y IL+R+ SKI L KCV SG
Sbjct: 16 KNKDQWSPYEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSG 75
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
+AD+K L + A Y++++ K+MS ++ Q+LSNTLY RFFPYYSF++L G++++
Sbjct: 76 MRADIKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSK 135
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GK Y YDAVGS+E YS GSG L P LD+ LK D PL E EA+
Sbjct: 136 GKAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDSLLK----------DRTEPLGEQEAI 185
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHRE 216
++ + SA ERDI+T + +EIV+LN +GI +E
Sbjct: 186 NIARDVMTSACERDIHTGDNVEIVILNSNGIRKE 219
>gi|405957660|gb|EKC23857.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 229
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 140/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGTC+AIAG D+ V +DTR+S G+SI +RD K KL V+ + GF DV
Sbjct: 18 FSPYAMNGGTCLAIAGEDFVVVGSDTRLSQGFSIFTRDLPKTYKLTTSTVLGACGFHGDV 77
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K+L AR +++H+H+K+M+ + +LS LY++RFFPYY +N++ GLD EGKG V
Sbjct: 78 LTLTKVLNARLKMFEHEHHKKMTTSEIAAMLSTMLYHRRFFPYYVYNLIAGLDEEGKGVV 137
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLV 185
Y++D VGSY GY ++GS + ++ P LDNQ+ L Q V LS+ + V+LV
Sbjct: 138 YSFDPVGSYGSDGYRARGSAAAMLQPLLDNQIG------LKNQQNVQRVSLSKEKVVNLV 191
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERDIYT + + + V+ KDG E LR+D
Sbjct: 192 KDVFISAAERDIYTGDAVVVHVITKDGTTTERFPLRRD 229
>gi|225703310|gb|ACO07501.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 139/218 (63%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SG D
Sbjct: 26 FSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGSHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLV 185
Y++D VG Y+R Y + GS S ++ P LDNQ+ + V PLS+ +AV LV
Sbjct: 146 YSFDPVGPYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHLPLSQEKAVQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L I ++ KDGI E + LRKD
Sbjct: 200 KDVFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|121543861|gb|ABM55595.1| putative proteasome subunit, beta type, 1 [Maconellicoccus
hirsutus]
Length = 229
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 145/220 (65%), Gaps = 4/220 (1%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
P ++PYD+NGG+ VA+ G D+ + A+DTR+STGYSI +R SKI KL+ +A +G
Sbjct: 14 HEPRFNPYDDNGGSIVAVGGDDFVIIASDTRLSTGYSIYTRHQSKIFKLSKISALACAGC 73
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
+DV +L+ AR +Y H+HNK+MS PA+ Q+LS +Y+KRFFPYY N+LGGL+ +G
Sbjct: 74 WSDVLTFTRLINARMQMYLHEHNKEMSTPALAQMLSTMMYHKRFFPYYVSNILGGLEKDG 133
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
G +Y+YD +G+ ER + + GS L+ P LDNQL + + ++ +S +A+
Sbjct: 134 SGWIYSYDPIGNMERSKFRAGGSSGALLQPLLDNQLGFANMENVESR----SISLEKALA 189
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+V+ F SA ERDIYT +K+ + V+ KD I + ++L KD
Sbjct: 190 VVRDVFISAAERDIYTGDKIHVTVITKDEIKEDTLQLTKD 229
>gi|229367266|gb|ACQ58613.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 140/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD GKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLDEHGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PL++ +AV LV
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHVPLTQDKAVQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L + ++ K+GI + + LRKD
Sbjct: 200 KDVFISAAERDVYTGDALRVCIITKEGISEQTVPLRKD 237
>gi|229367074|gb|ACQ58517.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 140/218 (64%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD GKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLDEHGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PL++ +AV LV
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGVQHVPLTQDKAVQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+YT + L + ++ K+GI + + LRKD
Sbjct: 200 KDVFISAAERDVYTGDALRVCIITKEGISEQTVPLRKD 237
>gi|159488463|ref|XP_001702229.1| hypothetical protein CHLREDRAFT_133001 [Chlamydomonas reinhardtii]
gi|158271266|gb|EDO97089.1| predicted protein [Chlamydomonas reinhardtii]
Length = 245
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 149/224 (66%), Gaps = 7/224 (3%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
+QH AWSPYD+NGGT VA+AG DYC+ AA TRMSTG+SIL+R+ + +++L + G
Sbjct: 26 RQHAAWSPYDDNGGTVVAVAGEDYCIVAASTRMSTGFSILTREATMMLQLGPQSRQVGRG 85
Query: 63 FQA--DVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+ V+ L ++ R L +K+ G+LLSNTLYYKRFFP+Y+FN+ GLD
Sbjct: 86 REGLMHVRRLAGVVCGRRLKKGWDQDKEAELWGAGRLLSNTLYYKRFFPFYTFNLCAGLD 145
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSG-STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 179
+G+G VY YDA+GSYER GY QG G S + + D +L++ + P+ TP S +
Sbjct: 146 EQGRGAVYNYDAIGSYERSGYFCQGFGRSRRFLGYCDLRLEARANTPPPSH---TPTS-S 201
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+DLVK F SA ERDIYT +++EI+++ ++G+ R+ ++L+ D
Sbjct: 202 TALDLVKDAFVSAGERDIYTGDQVEILIITREGVRRDSLQLKLD 245
>gi|395839143|ref|XP_003792460.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1
[Otolemur garnettii]
Length = 343
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 132 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 191
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 192 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 251
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PLS A+ LVK
Sbjct: 252 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVK 306
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ +DG E + LRKD
Sbjct: 307 DVFISAAERDVYTGDALKICIVTRDGTREETIPLRKD 343
>gi|291414594|ref|XP_002723544.1| PREDICTED: proteasome beta 1 subunit [Oryctolagus cuniculus]
Length = 241
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 141/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL D+ V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PL+ A+ LVK
Sbjct: 150 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHIPLTLDRAMRLVK 204
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 205 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|198424168|ref|XP_002121356.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 229
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 141/221 (63%), Gaps = 6/221 (2%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
KQH + PY NGG +A+AG D+ V A+DTR+S G+ I +RD+ K ++L V+A SG
Sbjct: 15 KQH-RFEPYAFNGGNILAVAGGDFAVVASDTRLSQGFMIHTRDHPKAVQLTANTVLAQSG 73
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
F+ D L+K + R +Y+H H K S A+ ++S LYYKRFFPYY +N++ GLDNE
Sbjct: 74 FEGDSLTLKKHVQMRIGMYEHNHGKTPSTSAIAAMISKMLYYKRFFPYYVYNIVAGLDNE 133
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GKGCVY+YD VGSYER Y + G+ + L+ P LDNQ+ + +A PLS+ AV
Sbjct: 134 GKGCVYSYDPVGSYEREQYRAAGAANELLQPLLDNQIGFKN-----MSEAGPPLSKERAV 188
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L CF SA ERDI T + + I V++KDG+ + LR+D
Sbjct: 189 QLCIDCFISAAERDITTGDCVLIQVIDKDGVETKKFPLRRD 229
>gi|449704101|gb|EMD44406.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 225
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 137/213 (64%), Gaps = 10/213 (4%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
++ WSPY++N GTCV I G D+ V A+DTRMS Y IL+R+ SKI L KCV SG
Sbjct: 16 KNNQWSPYEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGM 75
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
+AD+K L + A Y++++ K+MS ++ Q+LSNTLY RFFPYYSF++L G++++G
Sbjct: 76 RADIKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKG 135
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
K Y YDAVGS+E YS GSG L P LD+ LK D PL E EA++
Sbjct: 136 KAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDSLLK----------DRTEPLGEQEAIN 185
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHRE 216
+ + SA ERDI+T + +EIV+LN +GI +E
Sbjct: 186 IARDVMTSACERDIHTGDNVEIVILNSNGIRKE 218
>gi|380018248|ref|XP_003693045.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Apis florea]
Length = 237
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 141/219 (64%), Gaps = 9/219 (4%)
Query: 8 WSPYDNNGG-TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
++PY +NGG + +A+AG ++CV AADTR+STG+SI +R+ K+ L+ K V+ SG D
Sbjct: 25 FNPYADNGGKSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLXPLSSKTVLGCSGCWCD 84
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
L ++L+AR +Y+H+H K+M PA+ Q+LS LYYKRFFPYY N+LGGLD GKGC
Sbjct: 85 TLTLTRILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGKGC 144
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDL 184
VY+YD +G E Y + GS L+ P LDNQ+ + Q+ V PL++ AV +
Sbjct: 145 VYSYDPIGHCEITKYRAGGSAGALLQPLLDNQIGYKN------QEGVEPVPLTQERAVAI 198
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+K F SA ERDIYT + + I ++ DGI LRKD
Sbjct: 199 IKDVFTSAAERDIYTGDSIFIKIITSDGIQNFSFALRKD 237
>gi|158293754|ref|XP_315096.4| AGAP004991-PA [Anopheles gambiae str. PEST]
gi|157016597|gb|EAA10482.4| AGAP004991-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 139/214 (64%), Gaps = 4/214 (1%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
PY++NGG+ VAIAG D+ V ADTR+S+GYSI +R +K+ +L+DK V+AS+G D A
Sbjct: 22 PYESNGGSVVAIAGEDFAVIGADTRLSSGYSIHTRTQNKLFRLSDKTVLASTGCWCDTLA 81
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
L L+ R +Y+ QH K MS PA+ Q+LS +Y +RFFPYY NVL GLD +GKG VY+
Sbjct: 82 LTSLVKVRMQMYKDQHQKNMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDQDGKGVVYS 141
Query: 130 YDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCF 189
YD +G E Y + GS L+ P LDNQ+ + L + P+ +A+ ++K F
Sbjct: 142 YDPIGHCEMTTYRAGGSAGPLLQPVLDNQIGQKNMLNADPE----PVKMEKAISIIKDTF 197
Query: 190 ASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT + + I ++ KDGI E + LRKD
Sbjct: 198 ISATERDIYTGDSVIINIITKDGIKEETLHLRKD 231
>gi|195135135|ref|XP_002011990.1| GI16713 [Drosophila mojavensis]
gi|193918254|gb|EDW17121.1| GI16713 [Drosophila mojavensis]
Length = 235
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 143/220 (65%), Gaps = 2/220 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH +SPY++NGG+ VAIAG D+ V AADTR+S+GYSI SRD SK+ +++ K V+ S+G
Sbjct: 18 QHVDFSPYESNGGSIVAIAGDDFVVIAADTRLSSGYSIHSRDQSKLFEMSPKTVLGSTGC 77
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D +L L+ R +Y+H H K M+ A+ Q+LS +Y +RFFPYY N+L GLD +G
Sbjct: 78 WCDTLSLTGLVKVRMQMYEHTHLKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDG 137
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY+YD +G ER Y + GS L+ P LDNQ+ + L + D + PL++ AV
Sbjct: 138 KGAVYSYDPIGHCERATYRAGGSAGALLQPVLDNQIGYKNQNL--SLDQLPPLTKERAVA 195
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ F SA ERDIYT + + I ++ DGI + ++LRKD
Sbjct: 196 VASDTFISAAERDIYTGDSVLINIITADGIEKRELQLRKD 235
>gi|167393146|ref|XP_001740446.1| proteasome subunit beta type-1 [Entamoeba dispar SAW760]
gi|165895460|gb|EDR23141.1| proteasome subunit beta type-1, putative [Entamoeba dispar SAW760]
Length = 221
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 135/214 (63%), Gaps = 10/214 (4%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
K WSPY++N GTCV I G D+ V A+DTRMS Y IL+R+ SKI L KC+ SG
Sbjct: 11 KSKDEWSPYEDNCGTCVVIKGEDFVVVASDTRMSRDYMILTRNDSKIYPLTSKCIFTGSG 70
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
+AD+K L + A Y++++ K+MS ++ Q+LSNTLY RFFPYYSF++L G++++
Sbjct: 71 MRADMKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSK 130
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GK Y YDAVGS+E YS GSG L P LD+ LK D PL E EA+
Sbjct: 131 GKAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDSLLK----------DRTEPLGEQEAI 180
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHRE 216
++ + SA ERDI+T + +EIV+LN GI +E
Sbjct: 181 NIARDVMTSACERDIHTGDNVEIVILNSKGIRKE 214
>gi|16758370|ref|NP_446042.1| proteasome subunit beta type-1 precursor [Rattus norvegicus]
gi|130854|sp|P18421.3|PSB1_RAT RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|56998|emb|CAA36987.1| proteasome subunit RC5 [Rattus norvegicus]
Length = 240
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 140/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++ GLD EGKG V
Sbjct: 89 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAV 148
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ + Q+ PL+ A+ LVK
Sbjct: 149 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLTLDRAMRLVK 203
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 204 DVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|403374976|gb|EJY87456.1| Proteasome subunit beta type [Oxytricha trifallax]
Length = 255
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 142/221 (64%), Gaps = 7/221 (3%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
H ++PY NN GT VAIAG D+ + A+DTR+S G++ILSR+YS+ +L D+CV+ S G
Sbjct: 41 HHSGFNPYVNNQGTTVAIAGEDFVLVASDTRISQGFNILSREYSRTTRLTDQCVITSGGM 100
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD++ L KLL ++ YQ Q K + ++ QLL NTLY +RF P+Y+FN+L G+D G
Sbjct: 101 VADIETLHKLLISKVKTYQRQFKKTPTVESLAQLLGNTLYGRRFMPFYAFNLLCGIDVNG 160
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLP-AQDAVTPLSEAEAV 182
+G VY YDA+GSY+++ Y QGSGS L P LDNQ + L+ A+D E
Sbjct: 161 QGTVYGYDAIGSYDKLTYGVQGSGSELGAPILDNQFTGHNYLVKTLAKDV------QEVE 214
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
D K S ERDIYT +++E+V++NK G+ + +R+D
Sbjct: 215 DTAKDIINSIAERDIYTGDQVEVVIVNKHGVTVKREPIRRD 255
>gi|157119738|ref|XP_001659482.1| proteasome subunit beta type [Aedes aegypti]
gi|108875198|gb|EAT39423.1| AAEL008770-PA [Aedes aegypti]
Length = 231
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 143/214 (66%), Gaps = 4/214 (1%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
PY++NGG+ VAIAG D+ V ADTR+S+GYSI +R +K+ +++D+ V+AS+G D A
Sbjct: 22 PYESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRMSDRTVLASTGCWCDTLA 81
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
L L+ R +Y+ QH K M+ PA+ Q+LS +Y +RFFPYY NVL GLD +GKG +Y+
Sbjct: 82 LTSLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDADGKGVIYS 141
Query: 130 YDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCF 189
YD +G E+ Y + GS L+ P LDNQ+ + + + A TP+ +A+ ++K F
Sbjct: 142 YDPIGHCEKTTYRAGGSAGPLLQPVLDNQIGLKNMVNV----APTPVQLDKAISIIKDTF 197
Query: 190 ASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT + + I ++ KDGI E ++LRKD
Sbjct: 198 ISATERDIYTGDSVIINIITKDGIKEEIVQLRKD 231
>gi|325184015|emb|CCA18472.1| proteasome subunit beta putative [Albugo laibachii Nc14]
Length = 247
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 140/217 (64%), Gaps = 5/217 (2%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
AW PYD NGGT +AIAG DY V A D+R+STGYSILSR+ K+ +L V+AS G D
Sbjct: 36 AWEPYDFNGGTALAIAGPDYVVIAGDSRLSTGYSILSRNEKKLQQLTSTSVLASPGSHND 95
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V L+ +L + +Y H + +S + Q+L NTLY +RFFPYY+F VL G+D +GKG
Sbjct: 96 VIQLRGMLQLQIQMYMHDNQAIISTENLSQVLMNTLYSRRFFPYYAFCVLAGIDKDGKGA 155
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
VY+YDA+GSY+RV + GSG L++P LDN ++ S D ++ E +++K
Sbjct: 156 VYSYDAIGSYDRVSRGAVGSGGHLMIPLLDNLVEHYS-----RTDPKREFTQQETKEIIK 210
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F +A ERDIYT + +EI+ + GI +E+ EL+KD
Sbjct: 211 DAFITAGERDIYTGDCVEIMTITASGIEKEHFELKKD 247
>gi|126644014|ref|XP_001388169.1| proteasome subunit beta type 1 [Cryptosporidium parvum Iowa II]
gi|126117246|gb|EAZ51346.1| proteasome subunit beta type 1, putative [Cryptosporidium parvum
Iowa II]
Length = 246
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 144/221 (65%), Gaps = 6/221 (2%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
K +++PY NNGG+CVA+AG D+ V AADTR+S Y I SR SK +L +KC++A SG
Sbjct: 32 KIEHSFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSG 91
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
AD+ AL+K L A+ +Y+ +HNK S A+ QLLS LY KRFFPYYSF +L GLD +
Sbjct: 92 MLADINALRKTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDEQ 151
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GKG VY YDAVGS+++ + + GSG +LI LDNQ+ + Q + + + +
Sbjct: 152 GKGVVYGYDAVGSFDQHKFVALGSGGSLITSILDNQISGNN------QTSFESIDKVGII 205
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++VK SA+ERD++T + E++V++ GI + LR+D
Sbjct: 206 NIVKDSITSASERDVHTGDSAEVIVIDSSGISVSSLRLRED 246
>gi|170035625|ref|XP_001845669.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
gi|167877642|gb|EDS41025.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
Length = 231
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 140/214 (65%), Gaps = 4/214 (1%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
PY++NGG+ VAIAG D+ V ADTR+S+GYSI +R +K+ +L++ V+AS+G D A
Sbjct: 22 PYESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRLSEGTVLASTGCWCDTLA 81
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
L L+ R +Y+ QH K M+ PA+ Q+LS +Y +RFFPYY NVL GLD EG+G VY+
Sbjct: 82 LTSLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDEEGRGVVYS 141
Query: 130 YDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCF 189
YD +G E+ Y + GS L+ P LDNQ+ L + P+ A+AV ++K F
Sbjct: 142 YDPIGHCEKTTYRAGGSAGPLLQPVLDNQIG----LKNMVGASTEPVQLAKAVSIIKDTF 197
Query: 190 ASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT + + I ++ KDGI E ++LRKD
Sbjct: 198 ISATERDIYTGDSVIINIITKDGIKEEVVQLRKD 231
>gi|156547425|ref|XP_001605493.1| PREDICTED: proteasome subunit beta type-1-like isoform 1 [Nasonia
vitripennis]
gi|345484470|ref|XP_003425047.1| PREDICTED: proteasome subunit beta type-1-like isoform 2 [Nasonia
vitripennis]
Length = 236
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 142/221 (64%), Gaps = 6/221 (2%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
+QH +SPY +NGG+ VA+AG D+ + AAD+R+S G+SI +R K+ L++ V+ SG
Sbjct: 22 QQH--FSPYADNGGSVVALAGDDFSLIAADSRLSAGFSIYTRKQQKLFTLSETSVLGCSG 79
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
D+ L +++AAR +Y+H+H+K MS PA Q+LS LYYKRFFPYY N+L GLD E
Sbjct: 80 CWCDILTLTRVMAARMQMYKHEHHKTMSTPAAAQMLSTMLYYKRFFPYYINNILAGLDEE 139
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GKG +Y YD VG E+ Y + GS L+ P LDNQ+ L PL++ +A+
Sbjct: 140 GKGVIYRYDPVGHCEKNTYVAGGSAGALLQPLLDNQVG----YLNQENVEKIPLTKEKAL 195
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+VK F SA ERDIYT + + I ++ KDGI E +LR+D
Sbjct: 196 SIVKDVFISAAERDIYTGDGINIKIITKDGIVDETFDLRRD 236
>gi|327262119|ref|XP_003215873.1| PREDICTED: proteasome subunit beta type-1-like [Anolis
carolinensis]
Length = 239
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 140/217 (64%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S Y++ SRD K KL D V+ SGF D
Sbjct: 28 FSPYTFNGGTILAIAGEDFSIVASDTRLSEDYAVHSRDSPKCYKLTDTTVIGCSGFHGDC 87
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK MS A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 88 LTLTKIIEARLKMYKHSNNKIMSAGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 147
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-VTPLSEAEAVDLVK 186
Y++D VGSY+R + + GS S ++ P LDNQ+ L Q+ L+ +A+ LVK
Sbjct: 148 YSFDPVGSYQRDTFKAGGSASAMLQPLLDNQVG-----LKNMQNVQQVSLTLEKALQLVK 202
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L+I ++ KDGI E + LR+D
Sbjct: 203 DVFISAAERDVYTGDALKICIITKDGIKEETVPLRRD 239
>gi|145483595|ref|XP_001427820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145552816|ref|XP_001462083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394903|emb|CAK60422.1| unnamed protein product [Paramecium tetraurelia]
gi|124429921|emb|CAK94710.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 139/223 (62%), Gaps = 5/223 (2%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
+T + WSPY +N GT +A+ + A DTR+S GY+ILSRD +K+ +L DKCV+A+
Sbjct: 22 ITHKSDQWSPYHDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLAT 81
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+G AD AL+K L R +Y+ Q+ Q S + LLS LY +RFFPYY+FN+L GLD
Sbjct: 82 AGQYADFIALRKFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLD 141
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
G VY YDA+GSY+++ Y QGSG L++ LDNQLK + + + P + E
Sbjct: 142 ENNHGVVYGYDAIGSYDQMTYGVQGSGQELVVAVLDNQLKGYNKI-----NKTIPQTREE 196
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+D++ CF+ A ERDI+T + +EI+++ G R LRKD
Sbjct: 197 ILDIILDCFSCAAERDIHTGDNVEILIITAAGTERIVKPLRKD 239
>gi|229366584|gb|ACQ58272.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 138/218 (63%), Gaps = 8/218 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 26 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 85
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY + FFPYY +N++GGLD GKG V
Sbjct: 86 LTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRGFFPYYVYNIIGGLDEHGKGAV 145
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLV 185
Y++D VGSY+R Y + GS S ++ P LDNQ+ + V PL++ +AV LV
Sbjct: 146 YSFDPVGSYQRDTYKAGGSASAVLQPLLDNQIG------FKNMEGVQHVPLTQDKAVQLV 199
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERD+Y + L + ++ K+GI + + LRKD
Sbjct: 200 KDVFISAAERDVYIGDALRVCIITKEGISEQTVPLRKD 237
>gi|145520811|ref|XP_001446261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413738|emb|CAK78864.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 140/223 (62%), Gaps = 5/223 (2%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
+T + WSPY +N GT +AI + A DTR+S GY+IL+RD +K+ +L DKCV+A+
Sbjct: 22 ITHKSDQWSPYHDNSGTVLAIGIPGAVLVAGDTRLSNGYNILTRDATKLSQLTDKCVLAT 81
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+G AD AL+K L R +Y+ Q+ Q S + LLS LY +RFFPYY+FN+L GLD
Sbjct: 82 AGQYADFIALRKFLQQRLQLYEFQNEVQASTQTVAHLLSRELYSRRFFPYYTFNLLAGLD 141
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
G VY YDA+GSY+++ Y QGSG L++ LDNQLK + + + P ++ E
Sbjct: 142 ENNHGVVYGYDAIGSYDQMTYGVQGSGQELVVAVLDNQLKGYNKI-----NKTFPQTQQE 196
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+DL+ CF+ A ERDI+T + +EI+++ G R LRKD
Sbjct: 197 ILDLILDCFSCAAERDIHTGDNVEILIITPTGTERIVKPLRKD 239
>gi|194750661|ref|XP_001957648.1| GF10515 [Drosophila ananassae]
gi|190624930|gb|EDV40454.1| GF10515 [Drosophila ananassae]
Length = 235
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 143/220 (65%), Gaps = 2/220 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q +SPY++NGG+ VAIAG D+ V AADTR+S+GY+I SRD SK+ KL+D+ V+ S+G
Sbjct: 18 QQADFSPYESNGGSIVAIAGDDFVVIAADTRLSSGYNIHSRDQSKLFKLSDQTVLGSTGC 77
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD +L LL R Y+H H + M+ A+ Q+LS T+Y +RFFPYY N+L G+D +G
Sbjct: 78 WADTLSLTGLLKVRMQGYEHTHLRTMATDAVAQMLSITMYNRRFFPYYVSNILAGIDKDG 137
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY+YD +G ER Y + G+ TL+ P LDNQ+ + L ++ + L+ AV
Sbjct: 138 KGVVYSYDPIGHCERAFYRAGGTAGTLLQPVLDNQIGHKNINLSSSE--LPKLTIERAVA 195
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ F SA ERDIYT + + I ++ KDGI + ++LR D
Sbjct: 196 IASDTFISAAERDIYTGDSVLINIITKDGIEEKKLQLRLD 235
>gi|195328187|ref|XP_002030798.1| GM24382 [Drosophila sechellia]
gi|195590871|ref|XP_002085168.1| GD12455 [Drosophila simulans]
gi|194119741|gb|EDW41784.1| GM24382 [Drosophila sechellia]
gi|194197177|gb|EDX10753.1| GD12455 [Drosophila simulans]
Length = 235
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 142/220 (64%), Gaps = 2/220 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
+HP +SPY++NGG+ VAIAG D+ V AADTR+S+GY+I SR SK+ KL+ + V+ S+G
Sbjct: 18 KHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGC 77
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD +L + R Y+H H + M+ A+ Q+LS +Y +RFFPYY N+L G+DNEG
Sbjct: 78 WADTLSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEG 137
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY+YD +G E+ Y + G+ TL+ P LDNQ+ + + L D + L++ AV
Sbjct: 138 KGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKN-MNLEDADKI-KLTKDRAVS 195
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ F SA ERDIYT + + I ++ KDGI + LRKD
Sbjct: 196 VASDTFISAAERDIYTGDSVLINIITKDGIEVRTLSLRKD 235
>gi|17737605|ref|NP_524115.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|12643277|sp|P40304.2|PSB1_DROME RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome 26 kDa subunit; Flags: Precursor
gi|7294080|gb|AAF49435.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|15291705|gb|AAK93121.1| LD24159p [Drosophila melanogaster]
gi|220947536|gb|ACL86311.1| Pros26-PA [synthetic construct]
Length = 235
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 142/220 (64%), Gaps = 2/220 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
+HP +SPY++NGG+ VAIAG D+ V AADTR+S+GY+I SR SK+ KL+ + V+ S+G
Sbjct: 18 KHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGC 77
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD +L + R Y+H H + M+ A+ Q+LS +Y +RFFPYY N+L G+DNEG
Sbjct: 78 WADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEG 137
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY+YD +G E+ Y + G+ TL+ P LDNQ+ + + L D + L++ AV
Sbjct: 138 KGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKN-MNLEDADKI-KLTKERAVS 195
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ F SA ERDIYT + + I ++ KDGI + LR+D
Sbjct: 196 VASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>gi|195441689|ref|XP_002068635.1| GK20318 [Drosophila willistoni]
gi|194164720|gb|EDW79621.1| GK20318 [Drosophila willistoni]
Length = 233
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 142/220 (64%), Gaps = 2/220 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH +SPY++NGG+ VAIAG D+ V AADTR+S+GY+I +R +K+ KL++ V+ S+G
Sbjct: 16 QHHDFSPYESNGGSIVAIAGEDFAVIAADTRLSSGYNIHTRTQNKLFKLSENSVLGSTGC 75
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
+D +L LL R +Y+H H K MS A+ Q+LS T+Y +RFFPYY N+L G+D +G
Sbjct: 76 WSDTLSLTGLLKVRMQMYEHTHLKVMSTDALAQMLSITMYNRRFFPYYVSNILAGVDKDG 135
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY+YD +G ER Y + G+ L+ P LDNQ+ + L +QD + LS AV
Sbjct: 136 KGVVYSYDPIGHCERATYRAGGTAGPLLQPVLDNQIGYKNQNL--SQDELPKLSIDRAVA 193
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ F SA ERDIYT + + I ++ KD I + + LRKD
Sbjct: 194 VAFDTFISAAERDIYTGDSVIINIITKDEIKSQELPLRKD 233
>gi|392868|gb|AAC46465.1| proteasome subunit [Drosophila melanogaster]
Length = 235
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 142/220 (64%), Gaps = 2/220 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
+HP +SPY++NGG+ VAIAG D+ V AADTR+S+GY+I SR SK+ KL+ + V+ S+G
Sbjct: 18 KHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGC 77
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD +L + R Y+H H + M+ A+ Q+LS +Y +RFFPYY N+L G+DNEG
Sbjct: 78 WADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEG 137
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY+YD +G E+ Y + G+ TL+ P LDNQ+ + + L D + L++ AV
Sbjct: 138 KGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKN-MNLEDADKI-KLTKEWAVS 195
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ F SA ERDIYT + + I ++ KDGI + LR+D
Sbjct: 196 VASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>gi|390364342|ref|XP_001187732.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 229
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 142/225 (63%), Gaps = 16/225 (7%)
Query: 5 HPA----WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
HP ++PY NGGT +A+AG DY + A+DTR+S G+SI +RD K +L + S
Sbjct: 15 HPVEQQRFNPYTFNGGTIMAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYRLX----VIS 70
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+D +L K+L AR +Y+H+H+K+MS A+ +LS LYY+RFFPYY++N+L GLD
Sbjct: 71 IHICSDWPSLTKVLTARLKMYEHEHHKKMSTTAIAAMLSTILYYRRFFPYYTYNILAGLD 130
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSE 178
EGKGCVY++D VGSYER Y + GS S L+ P LDNQ+ + Q+ P+
Sbjct: 131 EEGKGCVYSFDPVGSYERETYRAAGSSSALLQPLLDNQIGGKN------QEGWVKEPIPV 184
Query: 179 AEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+AV LVK F SA ERDIYT + + + VL KDG E LR+D
Sbjct: 185 DKAVALVKDVFISAAERDIYTGDGIVLHVLTKDGCKEERFPLRRD 229
>gi|119567805|gb|EAW47420.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_a [Homo sapiens]
Length = 219
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 135/207 (65%), Gaps = 4/207 (1%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D L K++ A
Sbjct: 17 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 76
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY
Sbjct: 77 RLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSY 136
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+R + + GS S ++ P LDNQ+ + + + V PLS A+ LVK F SA ERD
Sbjct: 137 QRDSFKAGGSASAMLQPLLDNQVGFKN---MQNVEHV-PLSLDRAMRLVKDVFISAAERD 192
Query: 197 IYTANKLEIVVLNKDGIHREYMELRKD 223
+YT + L I ++ K+GI E + LRKD
Sbjct: 193 VYTGDALRICIVTKEGIREETVSLRKD 219
>gi|195495065|ref|XP_002095108.1| GE22205 [Drosophila yakuba]
gi|194181209|gb|EDW94820.1| GE22205 [Drosophila yakuba]
Length = 235
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 139/220 (63%), Gaps = 2/220 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
+H +SPY++NGG+ VAIAG D+ V AADTR+S+GY+I SR SK+ KL+ + V+ S+G
Sbjct: 18 KHADFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGC 77
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD +L + R Y+H H + M+ A+ Q+LS +Y +RFFPYY N+L G+DNEG
Sbjct: 78 WADTLSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEG 137
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY+YD +G E+ Y + G+ TL+ P LDNQ+ + L A L++ AV
Sbjct: 138 KGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLADADK--IKLTKERAVS 195
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ F SA ERDIYT + + I ++ KDGI + LR+D
Sbjct: 196 VASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>gi|321473024|gb|EFX83992.1| hypothetical protein DAPPUDRAFT_230628 [Daphnia pulex]
Length = 230
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 142/223 (63%), Gaps = 9/223 (4%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
KQH WSPY +NGGT VA+AG D+ + A+DTR+ GYSILSR+ +K+ KL+++ V+ SG
Sbjct: 15 KQH-HWSPYTDNGGTIVAVAGEDFAIIASDTRLIQGYSILSREQTKLFKLSEQTVLGVSG 73
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
DV + L AR +Y H+H K MS PA+ QL+S LY+KRFFPYY N++ GLD +
Sbjct: 74 CWCDVLTFTRTLEARMKMYLHEHLKPMSTPAVAQLVSTMLYHKRFFPYYVSNIVAGLDQD 133
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ--LKSPSPLLLPAQDAVTPLSEAE 180
GKG +Y+YD VG E+ Y + G+ ++ P LDNQ LK+ LLP +++ +
Sbjct: 134 GKGTLYSYDPVGHCEKNRYRAGGAAGAMLQPLLDNQVGLKNMKGELLPN------ITKEK 187
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+ ++K F SA ERD T + + I ++ K GI + LRKD
Sbjct: 188 ALMVIKDSFISAAERDTSTGDGVIINIITKAGIEVMHFPLRKD 230
>gi|390365759|ref|XP_001177076.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 201
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 132/205 (64%), Gaps = 4/205 (1%)
Query: 19 VAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARH 78
+A+AG DY + A+DTR+S G+SI +RD K +L D V+ +GF DV L K+L AR
Sbjct: 1 MAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYQLTDGTVLGCAGFHGDVLTLTKVLTARL 60
Query: 79 LIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER 138
+ +H+H+K+M A+ +LS LYY+RFFPYY++N+L GLD EGKGCVY++D VGSYER
Sbjct: 61 KMXEHEHHKKMFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSFDPVGSYER 120
Query: 139 VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIY 198
Y + GS S L+ P LDNQ+ + + P+ +AV LVK F SA ERDIY
Sbjct: 121 ETYRAAGSSSALLQPLLDNQIGGKNQEGWVKE----PIPVDKAVALVKDVFISAAERDIY 176
Query: 199 TANKLEIVVLNKDGIHREYMELRKD 223
T + + + VL KDG E LR+D
Sbjct: 177 TGDGIVLHVLTKDGCKEERFPLRRD 201
>gi|289742321|gb|ADD19908.1| 20S proteasome regulatory subunit beta type PSMB1/PRE7 [Glossina
morsitans morsitans]
Length = 236
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 144/224 (64%), Gaps = 9/224 (4%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
+H + PY++NGG+ VAIAG D+ V AAD+R+S+GY+I +R+ +K+ +L+ V+ S+G
Sbjct: 18 KHQDFQPYESNGGSIVAIAGNDFAVIAADSRLSSGYTIHTRNENKLFQLSSNAVLGSTGC 77
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D AL L+ AR +Y+H H+K MS A Q+LS +Y +RFFPYY NVL GL++EG
Sbjct: 78 WCDTLALTALVKARMQMYEHTHSKTMSTDATAQMLSILMYNRRFFPYYVSNVLAGLNSEG 137
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL----LPAQDAVTPLSEA 179
KG VY+YD +G +E+ + GS L+ P LDNQ+ + + PA+ L++
Sbjct: 138 KGVVYSYDPIGHFEKSNSRAGGSAGALLQPVLDNQIGLKNIKMEHIGFPAE-----LTKE 192
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
AV + F SATERDIYT + ++I ++ K GI + ++LRKD
Sbjct: 193 RAVAIASDAFISATERDIYTGDSVQINIITKSGIEVKELQLRKD 236
>gi|389584151|dbj|GAB66884.1| proteasome subunit beta type 1 [Plasmodium cynomolgi strain B]
Length = 241
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 135/216 (62%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
W+PY +NGGT + + G DY + AADTR+S YSI +R KI KL DKC++ SSG Q+D+
Sbjct: 31 WNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDI 90
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
K L LL + ++ +H + +LL LY +RFFPYY+FN+L G+ NE KG +
Sbjct: 91 KTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNENKGVL 150
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YDA+GSY +S GSGS LI+P LDN+++ + L+ + + +D VK
Sbjct: 151 YNYDAIGSYCEATHSCVGSGSALILPILDNRMEQKNQLIKNLN-----FNLRDDIDFVKD 205
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT +K EI +++ G++ +EL++D
Sbjct: 206 AITSATERDIYTGDKTEIYIIDHMGVNTTTLELKQD 241
>gi|242023933|ref|XP_002432385.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212517808|gb|EEB19647.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 219
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 139/223 (62%), Gaps = 4/223 (1%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
M + + Y +NGG+ VAIAG D+ V +DTR+S+ YSI +R+ SK+ KL+D V+
Sbjct: 1 MNPKETPFEFYTDNGGSIVAIAGEDFAVIGSDTRLSSNYSIFTRNQSKLFKLSDTTVLGC 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SG D L K++ A+ +Y H +NK M PA+ Q+LS LYYKRF PY +NVL GLD
Sbjct: 61 SGCWCDTLQLTKVVRAQMQMYFHDNNKVMVTPAVSQMLSTLLYYKRFMPYLVYNVLAGLD 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
++GKGCVY+YD +G ER + + GS L+ P LDNQL + + + L+ +
Sbjct: 121 DQGKGCVYSYDPIGHCERSTFRAGGSSGALLQPLLDNQLGYHNMENVKKEQ----LTLEK 176
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+ ++K F +A ERDIYT + + I V+ KDGI E +LRKD
Sbjct: 177 ALSVLKDVFIAAAERDIYTGDSIAIYVIKKDGIKSENFDLRKD 219
>gi|391338616|ref|XP_003743654.1| PREDICTED: proteasome subunit beta type-1-like [Metaseiulus
occidentalis]
Length = 233
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 135/217 (62%), Gaps = 4/217 (1%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
+ PY +N GT V IAG D+ V +D R+S G+SI SRD SK+ KL D+ V+ SSG AD
Sbjct: 21 GFDPYRDNAGTLVGIAGEDFAVIGSDLRLSLGFSIFSRDQSKLFKLTDRAVLGSSGCWAD 80
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
+L K L R Y +HN+ MS A+ Q S LY +RFFPY+++N+L G+D +GKG
Sbjct: 81 CVSLNKFLEIRLKTYGFEHNQPMSTKAIAQCCSTMLYSRRFFPYFAWNILAGIDEDGKGA 140
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+Y+YD VG++ERV Y + G+ ++PFLD+ + + + P+++ A++L+K
Sbjct: 141 IYSYDPVGNFERVPYQAAGNSGPQVLPFLDSIVGKKN----QSNPDKAPITKERAINLIK 196
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERDI + I+V+ KDG+ ++LRKD
Sbjct: 197 DIFISAAERDITVGDGTHIIVITKDGLEEIRLDLRKD 233
>gi|194872539|ref|XP_001973034.1| GG15866 [Drosophila erecta]
gi|190654817|gb|EDV52060.1| GG15866 [Drosophila erecta]
Length = 235
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 139/220 (63%), Gaps = 2/220 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
+H +SPY++NGG+ VAIAG D+ V AADTR+S+GY+I SR SK+ KL+ + V+ S+G
Sbjct: 18 KHVDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSHQTVLGSTGC 77
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD +L + R Y+H H + M+ A+ Q+LS +Y +RFFPYY N+L G+DNEG
Sbjct: 78 WADTLSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEG 137
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
KG VY+YD +G E+ Y + G+ TL+ P LDNQ+ + L A L++ AV
Sbjct: 138 KGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLADADK--IKLTKERAVS 195
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ F SA ERDIYT + + I ++ DGI + + LR+D
Sbjct: 196 VASDTFISAAERDIYTGDSVLINIITNDGIEVQTLPLRQD 235
>gi|344306709|ref|XP_003422027.1| PREDICTED: hypothetical protein LOC100675710 [Loxodonta africana]
Length = 560
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 133/208 (63%), Gaps = 6/208 (2%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T +AIAG D+ + A+DTR+S G+S+ +RD K KL DK V+ SGF D L K++ A
Sbjct: 358 TVLAIAGEDFSIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 417
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY
Sbjct: 418 RLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSY 477
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATER 195
+R + + GS S ++ P LDNQ+ Q+ PLS A+ LV+ F SA ER
Sbjct: 478 QRDSFKAGGSASAMLQPLLDNQVG-----FKNMQNVEHVPLSLDRALRLVRDVFISAAER 532
Query: 196 DIYTANKLEIVVLNKDGIHREYMELRKD 223
D+YT + L I ++ ++G+ E + LR+D
Sbjct: 533 DVYTGDALRICIVTQEGVREETLPLRRD 560
>gi|323445273|gb|EGB01969.1| hypothetical protein AURANDRAFT_9896 [Aureococcus anophagefferens]
Length = 150
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/150 (58%), Positives = 114/150 (76%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PYD NGGT +AI+GAD+ V AADTRMSTGYSI++R SK+ +L V+A++G Q DV
Sbjct: 1 FEPYDFNGGTTLAISGADFAVVAADTRMSTGYSIMTRKMSKLHQLGPNTVLAAAGCQTDV 60
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L +L R +Y+HQ K M+ ++ Q+L NTLYYKRFFPYY+FNVL G+D EGKGCV
Sbjct: 61 VCLVDVLKTRQKMYKHQTGKNMTTTSIAQMLGNTLYYKRFFPYYAFNVLAGVDKEGKGCV 120
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDN 157
Y+YDA+GS+ERV +S+ GSG + I+P LDN
Sbjct: 121 YSYDAIGSFERVPFSASGSGQSYIIPLLDN 150
>gi|209881526|ref|XP_002142201.1| proteasome subunit beta type 1 [Cryptosporidium muris RN66]
gi|209557807|gb|EEA07852.1| proteasome subunit beta type 1, putative [Cryptosporidium muris
RN66]
Length = 245
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 139/221 (62%), Gaps = 5/221 (2%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
K ++PY +NGG+C+A+AG+D+ V +DTR+S GY I SR +++ ++ KCV++ SG
Sbjct: 30 KSFGEFNPYTDNGGSCIALAGSDFAVIVSDTRLSQGYRIASRSVTRVFEITAKCVLSCSG 89
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
AD+ ALQKL+ AR IY+ +H K S A+ QLLS LY KRFFPYY + + GLD
Sbjct: 90 MFADITALQKLIRARVKIYEFEHKKSPSIGAVAQLLSTVLYSKRFFPYYCYCAIAGLDEY 149
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
G G Y YDAVGS++ Y + G+GS LI LDNQ+ S + L P ++ + +
Sbjct: 150 GNGVAYGYDAVGSFQSGKYFANGTGSHLISSILDNQI-SGNNQLYPK----ILTNKVDMI 204
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
DL+K SA+ERD+YT + ++VV++ GI LR+D
Sbjct: 205 DLLKDAITSASERDVYTGDSAQVVVIDASGISISSFPLRQD 245
>gi|343426757|emb|CBQ70285.1| probable PRE7-20S proteasome subunit(beta6) [Sporisorium reilianum
SRZ2]
Length = 291
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 131/204 (64%), Gaps = 2/204 (0%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPYD+NGG+ A+ G D+CV A+DTR STGY+I +R K+ +L DK +A++GF AD
Sbjct: 32 FSPYDSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGFAADA 91
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+AL + R +Y+H H + M ++ ++LS LY KRFFPYY +N+LGGLD EGKG V
Sbjct: 92 EALVSHVQQRLEMYRHAHGRSMPLHSIARMLSTILYGKRFFPYYVYNILGGLDEEGKGAV 151
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP--LSEAEAVDLV 185
Y++D VGSYER + G+ +LI PF DNQ+ + + P + TP ++ E + +V
Sbjct: 152 YSFDPVGSYEREFCRAAGAAQSLIQPFFDNQIMFRNQVSTPERTVPTPGQMTLPEVLKIV 211
Query: 186 KTCFASATERDIYTANKLEIVVLN 209
F SATER I + LE+ V+
Sbjct: 212 VDSFTSATERHIEVGDGLEVFVVR 235
>gi|403216524|emb|CCK71021.1| hypothetical protein KNAG_0F03590 [Kazachstania naganishii CBS
8797]
Length = 248
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 137/219 (62%), Gaps = 3/219 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR +T YSI SR SK+ + D V++++GF AD
Sbjct: 30 FNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRSESKVFDVGDGIVISANGFAADS 89
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL K Y N K++S A + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 90 TALVKRFRNSLKWYHFNENEKRLSLSAAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGA 149
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL--LPAQDAVTPLSEAEAVDL 184
VY++D VGSYER + G+ ++LIMPFLDNQ+ + + + +T LS E V L
Sbjct: 150 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPGTGEKRPITYLSVEEVVKL 209
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
V+ F SATER I+ + LEI+++ KDG+ REY EL++D
Sbjct: 210 VRDSFTSATERHIHVGDGLEILIVTKDGVRREYHELKRD 248
>gi|125977126|ref|XP_001352596.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|195168113|ref|XP_002024876.1| GL17976 [Drosophila persimilis]
gi|54641344|gb|EAL30094.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|194108306|gb|EDW30349.1| GL17976 [Drosophila persimilis]
Length = 235
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 142/219 (64%), Gaps = 2/219 (0%)
Query: 5 HPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQ 64
H +SPY++NGG+ VAIAG D+ V AADTR+S+GY+I +R SK+ L+++ V+AS+G
Sbjct: 19 HADFSPYESNGGSIVAIAGEDFVVIAADTRLSSGYNIHTRKQSKLFPLSNQTVLASTGCW 78
Query: 65 ADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 124
D +L L+ R Y+H H K M+ A+ Q+LS +Y +RFFPYY N+L G+D +GK
Sbjct: 79 CDTLSLTGLMKLRMQNYEHTHLKTMTTDAVAQMLSIIMYNRRFFPYYVSNILAGIDKDGK 138
Query: 125 GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDL 184
G V++YD +G ER Y + G+ L+ P LDNQ+ + + L +DA +++ AV +
Sbjct: 139 GVVFSYDPIGHCERATYRAGGTAGALLQPVLDNQIGYKN-MNLHGEDA-PEVTKERAVAV 196
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERDIYT + + I ++ KDGI + ++LR+D
Sbjct: 197 ASDTFISAAERDIYTGDSVLINIITKDGIETQELQLRQD 235
>gi|156095478|ref|XP_001613774.1| proteasome subunit beta type 1 [Plasmodium vivax Sal-1]
gi|148802648|gb|EDL44047.1| proteasome subunit beta type 1, putative [Plasmodium vivax]
Length = 241
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 135/216 (62%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
W+PY +NGGT + + G DY + AADTR+S YSI +R KI KL DKC++ SSG Q+D+
Sbjct: 31 WNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDI 90
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
K L LL + ++ +H + +LL LY +RFFPYY+FN+L G+ N+ KG +
Sbjct: 91 KTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDSKGVL 150
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YDA+GSY +S GSGS LI+P LDN+++ + L+ + + +D VK
Sbjct: 151 YNYDAIGSYCEATHSCVGSGSALILPILDNRMEQKNQLIKNLN-----FNLRDDLDFVKD 205
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT + EI ++++ G++ +EL++D
Sbjct: 206 AITSATERDIYTGDSTEIYIIDQMGVNTTSLELKQD 241
>gi|71018283|ref|XP_759372.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
gi|46099097|gb|EAK84330.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
Length = 356
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 130/204 (63%), Gaps = 2/204 (0%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPYD+NGG+ A+ G D+CV A+DTR STGY+I +R K+ +L DK +A++GF AD
Sbjct: 97 FSPYDSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGFAADA 156
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+AL + R +Y+H H + M ++ +++S LY KRFFPYY +N+LGGLD EGKG V
Sbjct: 157 EALVSHVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEEGKGAV 216
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP--LSEAEAVDLV 185
Y++D VGSYER + G+ +LI PF DNQ+ + P + TP ++ E + +V
Sbjct: 217 YSFDPVGSYEREFCRAAGAAQSLIQPFFDNQIMFRNQTSTPERTVPTPGQMTLGEVLKIV 276
Query: 186 KTCFASATERDIYTANKLEIVVLN 209
F SATER I + LE+ V+
Sbjct: 277 VDSFTSATERHIEVGDGLEVFVVR 300
>gi|302309124|ref|NP_986343.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|299788212|gb|AAS54167.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|374109588|gb|AEY98493.1| FAGL324Wp [Ashbya gossypii FDAG1]
Length = 243
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 139/224 (62%), Gaps = 5/224 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH ++PYD+NGGT + IAG D+ V A DTR +TGYSI SR+ K+ D +++++GF
Sbjct: 21 QHQ-FNPYDDNGGTILGIAGEDFAVLAGDTRHTTGYSINSREEPKVFDCGDNILISANGF 79
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD AL K Y+ HNK+M+ + + + + LY KR FPYY ++ GLD EG
Sbjct: 80 AADGDALVKRFKNSMKWYRFDHNKKMTIKSAARSIQHLLYGKRMFPYYVHTIIAGLDEEG 139
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA----QDAVTPLSEA 179
KG VY+YD VGSYER + G+ ++LIMPFLDNQ+ + + + A+ LS
Sbjct: 140 KGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPDSNGTKKRALRFLSVD 199
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
E V LV+ F SATER I+ + L+I+++ KDG+ E+ L+KD
Sbjct: 200 EVVRLVRDAFTSATERHIHVGDGLQIMIVTKDGVREEFYSLKKD 243
>gi|70954344|ref|XP_746223.1| proteasome subunit beta type 1 [Plasmodium chabaudi chabaudi]
gi|56526764|emb|CAH76320.1| proteasome subunit beta type 1, putative [Plasmodium chabaudi
chabaudi]
Length = 252
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 142/226 (62%), Gaps = 15/226 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
W+PY +NGGT + + G DY + A DTR+S YSI +R+ KI K+ DKC++ SSG Q+D+
Sbjct: 32 WNPYVDNGGTVIGLTGKDYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDI 91
Query: 68 KALQKLLAA-------RH---LIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLG 117
K L LL +H ++ +H+ S + +LL TLY +RFFPYY+FN+L
Sbjct: 92 KTLHSLLQVCYSKKLRKHKKIQLFYLEHSHYPSVHVIAKLLCVTLYSRRFFPYYTFNILA 151
Query: 118 GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 177
G+D GKG +Y+YDA+GSY + ++ GSGS+LI+P LDN+++ + L+ +
Sbjct: 152 GIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRVEQKNQLI-----KNMDFN 206
Query: 178 EAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ ++ VK SATERDIYT ++ EI +++ GI+ ++L+KD
Sbjct: 207 LGDDINFVKDAMTSATERDIYTGDQAEIYIIDNLGINTTLLDLKKD 252
>gi|296004560|ref|XP_002808699.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
gi|225631686|emb|CAX63970.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
Length = 240
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 135/216 (62%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
W PY +NGGT + + G DY + AADTR+S YSI +R KI KL DKC++ SSG Q+D+
Sbjct: 30 WYPYIDNGGTVIGLTGKDYVILAADTRLSLSYSIYTRFCPKISKLTDKCIIGSSGMQSDI 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
K L LL + ++ +H+ + +LL LY +RFFPYY+FN+L G+D KG +
Sbjct: 90 KTLHSLLQKKIQLFVLEHSHYPDIHVIARLLCVILYSRRFFPYYAFNILAGVDENNKGVL 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YD+VGSY +S GSGS LI+P LDN+++ + L+ T + + ++ VK
Sbjct: 150 YNYDSVGSYCEATHSCVGSGSQLILPILDNRVEQKNQLI-----KNTNFNLGDDINFVKD 204
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT +K I V++K GI+ ++L++D
Sbjct: 205 AITSATERDIYTGDKTLIYVIDKMGINVNTLDLKQD 240
>gi|367020378|ref|XP_003659474.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
42464]
gi|347006741|gb|AEO54229.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
42464]
Length = 265
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 143/231 (61%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL----ADK----CVMA 59
+ PY +NGG+ +AIAGAD+ V A DTR+S+GYSI SR + K+ K+ AD+ V++
Sbjct: 35 FEPYADNGGSTLAIAGADFTVMAGDTRLSSGYSINSRQHPKLFKIGGTTADQKDATIVLS 94
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL++ L A +Y+++H K MS A Q LS LY KRFFPYY+ +LGGL
Sbjct: 95 VVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYTHAILGGL 154
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA------- 172
D EGKG VY+YD VGSYER + G+ ++LIMPFLDNQ+ + + + +
Sbjct: 155 DEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPNSGEGHALQERK 214
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ +E LVK F A ER I + L+I+ + KDGI + L+KD
Sbjct: 215 RRPLTRSEVEVLVKDAFDGAVERHIEVGDGLQIMTITKDGIEEITLPLKKD 265
>gi|313231365|emb|CBY08480.1| unnamed protein product [Oikopleura dioica]
Length = 242
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 135/221 (61%), Gaps = 6/221 (2%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
K+H WSPY +GGTC+AIAG D+ + A+DTR+ I +R+ ++ + D C + G
Sbjct: 28 KRH--WSPYSWHGGTCLAIAGDDFVLMASDTRLGEHGGIYTRELNRNSPVTDHCAIGQCG 85
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
FQ D + L + + A+ IY+HQH +Q + PA+ +LS LYYKRFFPYY +N++ GLD +
Sbjct: 86 FQGDARVLLQNVKAKIRIYEHQHMEQPTAPAIAAMLSTMLYYKRFFPYYVYNIVAGLDGD 145
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GKG V++YD VGSY++V GS LI PFLDNQ++ P +DA ++
Sbjct: 146 GKGSVFSYDPVGSYDQVPMVCYGSAQNLIQPFLDNQIRRPH----IKEDAAPKMTRERVR 201
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L F SA+ER+ T + + + +++K G E + LR+D
Sbjct: 202 QLAIDAFISASERETNTGDGITVTLIDKTGTTVETIPLRRD 242
>gi|443895548|dbj|GAC72894.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7 [Pseudozyma
antarctica T-34]
Length = 292
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 131/204 (64%), Gaps = 2/204 (0%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPYD+NGG+ A+ G+D+CV A+DTR STGY+I +R K+ +L DK +A++GF AD
Sbjct: 29 FSPYDSNGGSIAAVCGSDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGFAADA 88
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+AL + R +Y+H H + M ++ +++S LY KRFFPYY +N+LGGLD +GKG V
Sbjct: 89 EALVSRIRQRLEMYRHAHGRSMPLHSIARMISTMLYGKRFFPYYVYNILGGLDEQGKGAV 148
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP--LSEAEAVDLV 185
Y++D VGSYER + G+ +LI PF DNQ+ + P + TP ++ E + +V
Sbjct: 149 YSFDPVGSYEREFCRAAGAAQSLIQPFFDNQIMFRNQSDTPERKVPTPGQMTLPEVLKIV 208
Query: 186 KTCFASATERDIYTANKLEIVVLN 209
F SATER I + LE+ V+
Sbjct: 209 IDSFTSATERHIEVGDGLEVFVVR 232
>gi|388851426|emb|CCF54828.1| probable PRE7-20S proteasome subunit(beta6) [Ustilago hordei]
Length = 291
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 128/203 (63%), Gaps = 2/203 (0%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPYD+NGG+ A+ G D+CV A+DTR STGY+I +R K+ +L DK +A++GF AD
Sbjct: 30 FSPYDSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGFAADA 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+AL + R +Y+H H + M ++ +++S LY KRFFPYY +N+LGGLD EGKG V
Sbjct: 90 EALVSRVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEEGKGAV 149
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP--LSEAEAVDLV 185
Y++D VGSYER + G+ +LI PF DNQ+ + P P ++ E + +V
Sbjct: 150 YSFDPVGSYEREFCRAAGAAQSLIQPFFDNQIMFKNQTSTPEHKVPEPGQMTLPEVLKIV 209
Query: 186 KTCFASATERDIYTANKLEIVVL 208
F SATER I + LE+ V+
Sbjct: 210 VDSFTSATERHIEVGDGLEVFVV 232
>gi|146186065|ref|XP_001032955.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|146143157|gb|EAR85292.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 247
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 133/217 (61%), Gaps = 6/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY N GT AIA D+ + A D R+S GYSI+SRD SK+ +L D +A+SG AD
Sbjct: 36 FNPYVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADF 95
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
AL K L+AR +Y++ + KQ + A+ LLS TLYYKRFFPYY+FN+L G D++G+G V
Sbjct: 96 AALSKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDDKGEGLV 155
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
YDAVGS + Y+ GSG+ LI P D + + + V E + +
Sbjct: 156 INYDAVGSGDFKKYAVLGSGAQLITPVFDQYFEGYNKIKKEQLHTVE-----EFISFIVD 210
Query: 188 CFASATERDIYTANKLEIVVLNKDGI-HREYMELRKD 223
CF SATERDIYT ++LEIV+L KD + LRKD
Sbjct: 211 CFESATERDIYTGDQLEIVILRKDKAPEYQLFPLRKD 247
>gi|164422783|ref|XP_963776.2| proteasome component C5 [Neurospora crassa OR74A]
gi|157069819|gb|EAA34540.2| proteasome component C5 [Neurospora crassa OR74A]
Length = 265
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 147/236 (62%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL----ADK--- 55
+QH + PY +NGG+ +AIAGAD+ + A DTR+++GYSI SR + K+ K+ AD+
Sbjct: 31 RQH-RFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIGGTTADQKDA 89
Query: 56 -CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y+++H K MS A Q LS LY KRFFPYY +
Sbjct: 90 TIVLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYA 149
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPLLLPA 169
+LGGLD EGKG VY+YD VGSYER + G+ ++LIMPFLDNQ+ P + A
Sbjct: 150 ILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGSGVGHA 209
Query: 170 --QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ PL+ +E LVK F A ER I + L+++V+ KDGI + L+KD
Sbjct: 210 LQERERKPLTRSEGEVLVKDAFDGAVERHIEVGDGLQMMVITKDGIEEVLLPLKKD 265
>gi|367011887|ref|XP_003680444.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
gi|359748103|emb|CCE91233.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
Length = 241
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 137/225 (60%), Gaps = 6/225 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH ++PY +NGGT + IAG D+ V A DTR +T YSI SR SK+ D VM+++GF
Sbjct: 18 QH-QFNPYTDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRHESKVFDCGDNIVMSANGF 76
Query: 64 QADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
AD +AL K Y HN K++S + + + + LY KRFFPYY ++ GLD E
Sbjct: 77 AADGEALVKRFKNSVKWYHFDHNDKKLSLSSAARNIQHLLYGKRFFPYYVHTIIAGLDEE 136
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV----TPLSE 178
GKG VY++D VGSYER + G+ ++LIMPFLDNQ+ + V T LS
Sbjct: 137 GKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQFEPGTNGKVRRPQTYLSI 196
Query: 179 AEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
E + LV+ F SATER I + LEI+++ KDG+ +E+ EL++D
Sbjct: 197 EEVIKLVRDAFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241
>gi|350296725|gb|EGZ77702.1| proteasome component C5 [Neurospora tetrasperma FGSC 2509]
Length = 265
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 147/236 (62%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL----ADK--- 55
+QH + PY +NGG+ +AIAGAD+ + A DTR+++GYSI SR + K+ K+ AD+
Sbjct: 31 RQH-RFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIGGTTADQKDA 89
Query: 56 -CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y+++H K MS A Q LS LY KRFFPYY +
Sbjct: 90 TIVLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYA 149
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPLLLPA 169
+LGGLD EGKG VY+YD VGSYER + G+ ++LIMPFLDNQ+ P + A
Sbjct: 150 ILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGSGVGHA 209
Query: 170 --QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ PL+ +E LVK F A ER I + L+++V+ KDGI + L+KD
Sbjct: 210 LQERERKPLTRSEGEVLVKDAFDGAVERHIEVGDGLQMMVITKDGIEEVSLPLKKD 265
>gi|336464627|gb|EGO52867.1| proteasome component C5 [Neurospora tetrasperma FGSC 2508]
Length = 265
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 147/236 (62%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL----ADK--- 55
+QH + PY +NGG+ +AIAGAD+ + A DTR+++GYSI SR + K+ K+ AD+
Sbjct: 31 RQH-RFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIGGTTADQKDA 89
Query: 56 -CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y+++H K MS A Q LS LY KRFFPYY +
Sbjct: 90 TIVLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYA 149
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPLLLPA 169
+LGGLD EGKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ P + A
Sbjct: 150 ILGGLDEEGKGAIYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGSGVGHA 209
Query: 170 --QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ PL+ +E LVK F A ER I + L+++V+ KDGI + L+KD
Sbjct: 210 LQERERKPLTRSEGEVLVKDAFDGAVERHIEVGDGLQMMVITKDGIEEVLLPLKKD 265
>gi|378725413|gb|EHY51872.1| 20S proteasome subunit beta 6 [Exophiala dermatitidis NIH/UT8656]
Length = 264
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 143/235 (60%), Gaps = 14/235 (5%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD------K 55
T+QH A++PY +NGG+ + I GAD+ + A DTR ++GYSI +R K+ ++ D +
Sbjct: 31 TRQH-AFNPYTDNGGSTLGITGADFAILAGDTRSTSGYSINTRYAPKLFRIGDDGDSSSR 89
Query: 56 CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV 115
V++ GF AD AL++ L A +Y++QH K MS A Q LS LY KRFFPYY +
Sbjct: 90 IVLSVVGFAADGNALKERLDAIVKMYKYQHGKPMSVKACAQRLSTILYQKRFFPYYVHAI 149
Query: 116 LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA------ 169
LGGLD +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ + + +
Sbjct: 150 LGGLDEDGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNYKNQYIAGSGFGHEL 209
Query: 170 -QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
Q L + + LVK F SATER I + L+++++ KDGI Y L++D
Sbjct: 210 QQRQPESLPKDVVIGLVKDAFTSATERHIEVGDGLQMLIITKDGIEETYTPLKRD 264
>gi|171680321|ref|XP_001905106.1| hypothetical protein [Podospora anserina S mat+]
gi|170939787|emb|CAP65013.1| unnamed protein product [Podospora anserina S mat+]
Length = 264
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 144/236 (61%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC------ 56
+QH + PY +NGG+ +AIAGAD+ + A DTR+++GYSI SR + K+ K+
Sbjct: 30 RQH-RFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRFHPKVFKIGGTTSDQSDA 88
Query: 57 --VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y+++H K MS A Q LS LY KRFFPYY++
Sbjct: 89 TLVLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYAYA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+LGGLD EGKG VY+YD VGSYER + G+ ++LIMPFLDNQ+ + + + +
Sbjct: 149 ILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQFIPGSGEGHA 208
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ E LVK F A ER I + L+++++ K+GI + L++D
Sbjct: 209 LQERERRPLTRQEVETLVKDAFDGAVERHIEVGDGLQMMIITKEGIEEVILPLKRD 264
>gi|221056989|ref|XP_002259632.1| Proteasome subunit beta type [Plasmodium knowlesi strain H]
gi|193809704|emb|CAQ40406.1| Proteasome subunit beta type, putative [Plasmodium knowlesi strain
H]
Length = 241
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 134/216 (62%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
W+PY +NGGT + + G DY + AADTR+S YSI +R KI KL DKC++ SSG Q+D+
Sbjct: 31 WNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRYCPKISKLTDKCIIGSSGMQSDI 90
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
K L LL + ++ +H + +LL LY +RFFPYY+FN+L G+ N+ KG +
Sbjct: 91 KTLHSLLKKKIELFVLEHGHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDNKGVL 150
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YDA+GSY +S GSG+ LI P LDN+++ + L+ + + +D VK
Sbjct: 151 YNYDAIGSYCEATHSCVGSGAALIFPILDNRMEQKNQLIKNLN-----FNLRDDIDFVKD 205
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT ++ EI ++++ G+ ++L++D
Sbjct: 206 AITSATERDIYTGDQTEIYIIDQMGVKTTTLDLKQD 241
>gi|164657003|ref|XP_001729628.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
gi|159103521|gb|EDP42414.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
Length = 257
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 127/213 (59%), Gaps = 20/213 (9%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY +NGG+ +AI G DYCV A DTR S GY+I +R K+ +L DK +A++GF AD
Sbjct: 7 FSPYTSNGGSIMAIHGDDYCVIAGDTRQSEGYNIQTRYKPKVFRLTDKATLATNGFAADA 66
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+AL + R +YQH H + M A+ ++LS LY KRFFPYY +N+LGG+D EG+G V
Sbjct: 67 EALVARVKTRLEMYQHTHGRSMPLHAIARMLSTILYSKRFFPYYVYNILGGIDEEGRGAV 126
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL-----------KSPSPLLLPAQDAVTPL 176
Y YD VGSYER+ + G+ L+ PFLDNQ+ K P P LP Q
Sbjct: 127 YGYDPVGSYERIVCCASGAAQGLLQPFLDNQVMFKNLNSTAETKIPEPGHLPLQ------ 180
Query: 177 SEAEAVDLVKTCFASATERDIYTANKLEIVVLN 209
A+ +V F SATER I + LE+ V+
Sbjct: 181 ---HALRIVMDSFTSATERHIEVGDGLEVFVVR 210
>gi|156036420|ref|XP_001586321.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154698304|gb|EDN98042.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 264
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 140/235 (59%), Gaps = 15/235 (6%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC------- 56
QH + PY +NGG+ +AI+G+D+ + A DTR ++GY+I +R K+ K+
Sbjct: 30 QHHGFYPYTDNGGSTLAISGSDFTIVAGDTRSTSGYNINTRYQPKVFKIGGTTASQDDAT 89
Query: 57 -VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV 115
V++ GF AD +AL++ L A +Y++QH K MS A Q L+ LY KRFFPYY +
Sbjct: 90 LVLSVVGFAADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTAI 149
Query: 116 LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLP------- 168
LGGLD EGKG VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +
Sbjct: 150 LGGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQYIPGSGVGHEL 209
Query: 169 AQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+ PL E DLVK F SA ER I + L+++++ KDGI Y L++D
Sbjct: 210 AEREKIPLPRNEVEDLVKDAFDSAVERHIEVGDGLQMLIITKDGIEEIYKPLKRD 264
>gi|242247122|ref|NP_001156136.1| proteasome subunit beta type-like [Acyrthosiphon pisum]
gi|239799300|dbj|BAH70578.1| ACYPI003417 [Acyrthosiphon pisum]
Length = 222
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 138/216 (63%), Gaps = 8/216 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY +NGG+ VAI+G D+ + A+DTR+S GY I +R SK+ +L+DK V+ +G D
Sbjct: 15 FEPYASNGGSIVAISGKDFAIVASDTRLSEGYMIYTRKQSKLFQLSDKSVLGCTGCWCDT 74
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+L ++ ++ Y + HN M ++ QLLS LY +RFFPYY +NVL GLD G+GC+
Sbjct: 75 LSLTNIIQSQLKSYLYDHNTIMQPNSIAQLLSTLLYSRRFFPYYVYNVLAGLDINGEGCL 134
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YD VG E+V Y++ GS L+ PFLD+ L + + A P++E EA+ LVK
Sbjct: 135 YSYDPVGHCEKVNYTAGGSSGVLMQPFLDSWLGN--------RTAENPVTEEEALSLVKD 186
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F +A ERDIYT +++ ++ K+GI ++LRKD
Sbjct: 187 AFTAAGERDIYTGDEVVYNIIKKNGIKTGVVQLRKD 222
>gi|210075667|ref|XP_502489.2| YALI0D06523p [Yarrowia lipolytica]
gi|199425772|emb|CAG80677.2| YALI0D06523p [Yarrowia lipolytica CLIB122]
Length = 248
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 139/216 (64%), Gaps = 4/216 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ + A DTR +TGYSI SR K+ + D ++ ++GF AD
Sbjct: 37 FNPYGDNGGTVLGIAGDDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILVTANGFSADG 96
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
AL + + +Y +Q+NK + + + + + LY KRFFPYY ++ GLD EGKG V
Sbjct: 97 DALIENIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDEEGKGAV 156
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YD VGSYER + GS ++L+MPFLD+Q+ + + + PL+ EA+ +VK
Sbjct: 157 YSYDPVGSYEREFCRAGGSAASLVMPFLDSQVNKKNQQV----ENPPPLTLEEALKVVKD 212
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F+SATER I+ + LEI+++ K+G+ +E+ L++D
Sbjct: 213 AFSSATERHIHVGDGLEILIVTKEGVRKEFFPLKRD 248
>gi|406602407|emb|CCH46023.1| Proteasome subunit beta type-1-A [Wickerhamomyces ciferrii]
Length = 242
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 134/221 (60%), Gaps = 6/221 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR + GYSI SR K+ D V++++GF AD
Sbjct: 23 FNPYSDNGGTILGIAGEDFSVLAGDTRHTVGYSINSRYEPKVFDAGDNIVVSANGFSADG 82
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
AL Y +NK++S + + + + LY KRFFPYY ++ GLD+EGKG V
Sbjct: 83 NALVSRFKNHLKWYHFNNNKKISLSSAARFIQHMLYGKRFFPYYVHTIIAGLDDEGKGAV 142
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEAV 182
Y++D VGSYER + G+ ++LIMPFLDNQ+ + P D LS E +
Sbjct: 143 YSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTDGKVKKELKYLSLEEVI 201
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LV+ F+SATER I+ + LEI+++ KDG+ EY +L++D
Sbjct: 202 QLVRDAFSSATERHIHVGDGLEILIVTKDGVRTEYFDLKRD 242
>gi|225719280|gb|ACO15486.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 239
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 135/218 (61%), Gaps = 5/218 (2%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQA 65
++ PY +NGGT + IAG D+ V A+DTR+++G Y ILSR+ K+ +L++K V+ S G
Sbjct: 26 SFQPYQDNGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVLGSCGCWC 85
Query: 66 DVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
DV +++ ++ Y + H K + PA+ QL+SN+LY +RF PYY NVL GLD G+G
Sbjct: 86 DVLTFVRVMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGLDENGQG 145
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
C+YTYD VG E+V S G+ LI P LDN + + +D L+ E+V+L+
Sbjct: 146 CIYTYDPVGCIEKVTMSCSGASMELIQPILDNIIDKKNMTNATKKD----LTIDESVNLI 201
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
CF SATER I T + + ++ KDGI + + LR+D
Sbjct: 202 HDCFVSATERQISTGDGIIFKIITKDGIETKSVGLRRD 239
>gi|225719776|gb|ACO15734.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 271
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 135/218 (61%), Gaps = 5/218 (2%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQA 65
++ PY +NGGT + IAG D+ V A+DTR+++G Y ILSR+ K+ +L++K V+ S G
Sbjct: 58 SFQPYQDNGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVLGSCGCWC 117
Query: 66 DVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
DV +++ ++ Y + H K + PA+ QL+SN+LY +RF PYY NVL GLD G+G
Sbjct: 118 DVLTFVRVMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGLDENGQG 177
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
C+YTYD VG E+V S G+ LI P LDN + + +D L+ E+V+L+
Sbjct: 178 CIYTYDPVGCIEKVTMSCSGASMELIQPILDNIIDKKNMTNATKKD----LTIDESVNLI 233
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
CF SATER I T + + ++ KDGI + + LR+D
Sbjct: 234 HDCFVSATERQISTGDGIIFKIITKDGIETKSVGLRRD 271
>gi|402222920|gb|EJU02985.1| N-terminal nucleophile aminohydrolase [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 7/213 (3%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH ++PY NGGT +AIAG D+ V A DTR + GYSI +R K+ KL D+ V+A +GF
Sbjct: 16 QH-QFNPYAENGGTILAIAGKDFSVIAGDTRQTEGYSIQTRYAPKVFKLTDRAVLAVNGF 74
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
QAD K + R Y+H H+KQM A+ +++ LY KRFFPYY++N+LGG++ +G
Sbjct: 75 QADCSTFVKKVKQRIEWYRHAHSKQMPLKAIARMIQGMLYGKRFFPYYTYNILGGIEEDG 134
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPAQDAVTPLSEA 179
G VY++D VGSYER + G+ S+LI PFLDNQ+ ++P+P P + P+
Sbjct: 135 TGAVYSFDPVGSYEREACRAAGAASSLIQPFLDNQIYFKNQTPAPGAAPFEPGNLPMD-- 192
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDG 212
+ +V F SATER I + LE+ V+ G
Sbjct: 193 TVLSIVIDSFTSATERHIEVGDGLEMFVVVAPG 225
>gi|154308528|ref|XP_001553600.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347826621|emb|CCD42318.1| similar to proteasome subunit beta type-1-A [Botryotinia
fuckeliana]
Length = 264
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 140/235 (59%), Gaps = 15/235 (6%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC------- 56
QH + PY +NGG+ +AI+G+D+ + A DTR ++GY+I +R K+ K+
Sbjct: 30 QHHGFYPYTDNGGSTLAISGSDFTIVAGDTRSTSGYNINTRYQPKVFKIGGTTAAQDDAT 89
Query: 57 -VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV 115
V++ GF AD +AL++ L A +Y++QH K MS A Q L+ LY KRFFPYY +
Sbjct: 90 LVLSVVGFAADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTAI 149
Query: 116 LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLP------- 168
LGGLD EGKG VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +
Sbjct: 150 LGGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQYIPGSGEGHAL 209
Query: 169 AQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A+ PL E DLVK F SA ER I + L+++++ K+GI Y L++D
Sbjct: 210 AEREKIPLPRKEVEDLVKDAFDSAVERHIEVGDGLQMLIITKEGIEEIYKPLKRD 264
>gi|71028614|ref|XP_763950.1| proteasome beat subunit [Theileria parva strain Muguga]
gi|68350904|gb|EAN31667.1| proteasome beat subunit, putative [Theileria parva]
Length = 218
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 143/225 (63%), Gaps = 9/225 (4%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
M + ++PY NNGGT +A +Y V AADTR+S Y I +R +K+ KL DKC++ +
Sbjct: 1 MNRPEERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGT 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SG QAD+ ALQ +L + +Y++ HN++ + A+ QLLS LY +RFFPYY+FN+L G+D
Sbjct: 61 SGMQADMLALQSVLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGID 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+GKG V YDAVG+Y Y++QG+ S+L++ LDN L + + P +++ L
Sbjct: 121 EQGKGVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDL---- 176
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHRE--YMELRKD 223
V+LVK SA ERDI T + E+V+ DG+ E +M+LR D
Sbjct: 177 -VNLVKNAMVSAVERDICTGDSAELVIC--DGVVMEPVHMDLRID 218
>gi|340992803|gb|EGS23358.1| putative proteasome protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 265
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 145/231 (62%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL----ADK----CVMA 59
+ PY +NGG+ +AIAGAD+ + A DTR+++GYSI SR + K+ K+ AD+ V++
Sbjct: 35 FDPYADNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLYKIGGTTADQSDATIVLS 94
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL++ L A +Y+++H K MS A Q LS LY KRFFPYY++ +LGGL
Sbjct: 95 VVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYAYAILGGL 154
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA------- 172
D EGKG VY+YD VGSYER + G+ ++LIMPFLDNQ+ + + + +
Sbjct: 155 DEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQYVPGSGEGHNLQERP 214
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ +E LVK F A ER I + L+++V+ KDGI + L++D
Sbjct: 215 RRPLTRSEVEVLVKDAFDGAVERHIEVGDGLQMMVITKDGIEEILLPLKRD 265
>gi|50308397|ref|XP_454200.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643335|emb|CAG99287.1| KLLA0E05633p [Kluyveromyces lactis]
Length = 240
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 137/224 (61%), Gaps = 5/224 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH ++PY +NGGT + IAG D+ V A DTR +T YSI SR K+ + D +++++GF
Sbjct: 18 QH-QFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFECEDNILISANGF 76
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD +AL K + Y HNK+++ + + + + LY KR FPYY ++ GLD EG
Sbjct: 77 AADGEALVKRFKNSQMWYHFNHNKKLTIKSAARNIQHLLYGKRMFPYYVHTIIAGLDEEG 136
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA----QDAVTPLSEA 179
KG VY++D VGSYER + GS ++LIMPFLDNQ+ + + + V L
Sbjct: 137 KGAVYSFDPVGSYEREQCRAGGSAASLIMPFLDNQVNLKNQYEPDSNGTKRKEVKYLGVE 196
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
E + LV+ F SATER I + LEI+++ KDG+ +EY +L++D
Sbjct: 197 EVIKLVRDAFTSATERHINVGDGLEILIVTKDGVRKEYFDLKRD 240
>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 133/210 (63%), Gaps = 5/210 (2%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGGT AIAG DY + AADTR++ GY ILSR+ S++ L CV+ ++G D+ L +
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L Y++ H +++S A+ LLSNTLY +RFFP Y+FNVL GLD G+G +Y+YDA+
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAI 121
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS+E + Y+ QGS + I+P LD+ + + + L EA++L+K F + T
Sbjct: 122 GSFELMKYAVQGSAQSHIIPILDSCVAKKN-----RNEPYVDLDREEALNLMKEVFTAGT 176
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ER+ T ++LEI+ + GI RE MELRKD
Sbjct: 177 EREKDTGDQLEILTVTAHGIEREVMELRKD 206
>gi|225711612|gb|ACO11652.1| Proteasome subunit beta type-1 precursor [Caligus rogercresseyi]
Length = 238
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 133/217 (61%), Gaps = 4/217 (1%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
++ PY +NGGT V IAG+D+ V A+DTR+++ Y ILSR+ KI +L CV+ S G D
Sbjct: 26 SFQPYQDNGGTTVGIAGSDFVVIASDTRLASSYDILSRNVPKIFELGSGCVLGSCGCWCD 85
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V ++ ++ Y + H K+++ PA+ Q+LSNTLY +RFFPYY NVL GLD +G+G
Sbjct: 86 VLTFIRVAESKLKDYHYTHGKELNTPALAQMLSNTLYRRRFFPYYIHNVLAGLDEKGQGV 145
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+YTYD VG E+V S G+ LI P LDN ++ + + LS E V+++
Sbjct: 146 IYTYDPVGHCEKVKMSCGGTSMELIQPILDNIVEKKN----MTNGTMKDLSIDETVNIIH 201
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
CF SA ER I T + + ++ K+GI + + LR+D
Sbjct: 202 DCFISAAERQIQTGDGIMFKIITKEGIETKSVGLRRD 238
>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 133/210 (63%), Gaps = 5/210 (2%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGGT AIAG DY + AADTR++ GY ILSR+ S++ L CV+ ++G D+ L +
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L Y++ H +++S A+ LLSNTLY +RFFP Y+FNVL GLD G+G +Y+YDA+
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAI 121
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS+E + Y+ QGS + I+P LD+ + + + L EA++L+K F + T
Sbjct: 122 GSFELMKYAVQGSAQSHIIPILDSCVAKKN-----RNEPYVDLDREEALNLMKEVFTAGT 176
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ER+ T ++LEI+ + GI RE MELRKD
Sbjct: 177 EREKDTGDQLEILTVTAHGIEREVMELRKD 206
>gi|429329412|gb|AFZ81171.1| proteasome subunit beta type 1, putative [Babesia equi]
Length = 218
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 139/225 (61%), Gaps = 9/225 (4%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
M ++PY NNGGT VA +Y V AADTR+S GY+I +R+ SK+IKL D C++ +
Sbjct: 1 MGDSDRGFNPYVNNGGTVVAATWKNYAVIAADTRLSIGYAIHTRNVSKMIKLTDTCILGT 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SG QAD+ AL + + +Y+ H+K S A+ QLLS LY +RFFPYY+FN+L G+D
Sbjct: 61 SGMQADMLALHSAMERQVELYRFTHHKTPSFGAIAQLLSTILYSRRFFPYYTFNILCGID 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
G G V +YDA+G+Y Y++QG+ S+LI D Q+ + L+ P ++ L
Sbjct: 121 ENGNGVVCSYDAIGNYNYEKYAAQGTSSSLITSIFDCQINGNNCLVKPEIKSLEDL---- 176
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHRE--YMELRKD 223
V+++K ASA ERDIYT + ++V+ DGI E M+LR D
Sbjct: 177 -VNIIKNALASAVERDIYTGDSAQVVIC--DGIVHEPVIMDLRID 218
>gi|321260412|ref|XP_003194926.1| 20S proteasome beta-type subunit; Pre7p [Cryptococcus gattii WM276]
gi|317461398|gb|ADV23139.1| 20S proteasome beta-type subunit, putative; Pre7p [Cryptococcus
gattii WM276]
Length = 272
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 7/213 (3%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH ++PY +NGG+ +AIAG D+ + A DTR S GYSI +R K+ +L DK V+A++GF
Sbjct: 20 QHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATNGF 79
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H HNK MS ++ +++ LY KRFFPYY +N+LGG++ +G
Sbjct: 80 AADGNNFVKRVKQRLEWYEHAHNKPMSLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDG 139
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPAQDAVTPLSEA 179
G VY++D VGSYER + G+ +LI PFLDNQ+ + P P P PLS
Sbjct: 140 SGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQVYFKNQQPEPGAAPFVPGNLPLS-- 197
Query: 180 EAVDLVKTCFASATERDIYTANKLEI-VVLNKD 211
+ LV F SATER I + +EI VV+ K+
Sbjct: 198 TVLSLVVDSFTSATERHIEVGDGMEIYVVMAKE 230
>gi|50287473|ref|XP_446166.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525473|emb|CAG59090.1| unnamed protein product [Candida glabrata]
Length = 242
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 136/222 (61%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR +T YSI SR K+ D +M+++GF AD
Sbjct: 22 FNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIIMSANGFAADG 81
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
+AL K Y HN K++S + + + + LY KRFFPYY ++ GLD+EGKG
Sbjct: 82 EALVKRFKNSIKWYHFDHNDKKLSISSAARNIQHLLYGKRFFPYYVHTIIAGLDDEGKGA 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEA 181
VY++D VGSYER + G+ ++LIMPFLDNQ+ + +P D LS E
Sbjct: 142 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YVPGTDGKVKRELKYLSLEEV 200
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SATER I+ + LEI+++ K+G+ E+ EL++D
Sbjct: 201 IKLVRDAFTSATERHIHVGDGLEILIVTKEGVRTEFFELKRD 242
>gi|406862546|gb|EKD15596.1| proteasome component C5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 264
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 142/237 (59%), Gaps = 16/237 (6%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC----- 56
KQH + PY +NGG+ +AI+GAD+ + A DTR ++GY+I +R K+ K+
Sbjct: 29 NKQH-GFYPYTDNGGSTLAISGADFTIMAGDTRSTSGYNINTRYAPKVFKIGGTTSSQDD 87
Query: 57 ---VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
V++ GF AD +AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 88 ATLVLSVVGFAADGEALKERLDAVVKMYRYQHGKPMSVKACAQRLSTILYGKRFFPYYVT 147
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA---- 169
+LGGLD EG+G VY+YD VGSYER + G+ ++LIMPFLDNQ+ + + +
Sbjct: 148 AILGGLDEEGRGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQYIPGSGIGH 207
Query: 170 ---QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ PL +E DLVK F SA ER I + L+++++ K+GI Y L+KD
Sbjct: 208 ALQEREKLPLPRSEVEDLVKDAFDSAVERHIEVGDGLQMLIVTKNGIEEIYKPLKKD 264
>gi|260941638|ref|XP_002614985.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851408|gb|EEQ40872.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 241
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR+ +GY+I SR KI + D VM ++GF AD
Sbjct: 21 FNPYSDNGGTVLGIAGEDFAVLAGDTRIVSGYNIDSRYEPKIFDVGDNIVMTANGFAADG 80
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL + Y+ HN K+++ + + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 81 AALIDQFRSSFKWYKFDHNNKKLTIRSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGA 140
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + P D L E
Sbjct: 141 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGSDGTKKKELRYLKLDEV 199
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LVK F+SATER IY + LEI ++ KDG+ +EY L++D
Sbjct: 200 LQLVKDAFSSATERHIYVGDGLEIFIVTKDGVRKEYYPLKRD 241
>gi|405121415|gb|AFR96184.1| proteasome subunit [Cryptococcus neoformans var. grubii H99]
Length = 272
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 6/213 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH ++PY +NGG+ +AIAG D+ + A DTR S GYSI +R K+ +L DK V+A++GF
Sbjct: 20 QHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATNGF 79
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H HNK M ++ +++ LY KRFFPYY +N+LGG++ +G
Sbjct: 80 AADGNNFVKRVKQRLEWYEHAHNKSMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDG 139
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPAQDAVTPLSEA 179
G VY++D VGSYER + G+ +LI PFLDNQ+ + P P P PLS
Sbjct: 140 SGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQVYFRNQQPEPGAAPFVPGNLPLS-- 197
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDG 212
+ LV F SATER I + +EI V+ G
Sbjct: 198 TVLSLVVDSFTSATERHIEVGDGMEIYVVMAKG 230
>gi|58268196|ref|XP_571254.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113318|ref|XP_774684.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257328|gb|EAL20037.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227489|gb|AAW43947.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 272
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 6/213 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH ++PY +NGG+ +AIAG D+ + A DTR S GYSI +R K+ +L DK V+A++GF
Sbjct: 20 QHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATNGF 79
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H HNK M ++ +++ LY KRFFPYY +N+LGG++ +G
Sbjct: 80 AADGNNFVKRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDG 139
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPAQDAVTPLSEA 179
G VY++D VGSYER + G+ +LI PFLDNQ+ + P P P PLS
Sbjct: 140 SGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQVYFKNQQPEPGAAPFVPGNLPLS-- 197
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDG 212
+ LV F SATER I + +EI V+ G
Sbjct: 198 TVLSLVVDSFTSATERHIEVGDGMEIYVVMAKG 230
>gi|366989313|ref|XP_003674424.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
gi|342300287|emb|CCC68046.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
Length = 241
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 136/222 (61%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR +T YSI SR K+ D V++++GF AD
Sbjct: 21 FNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADG 80
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
+AL K Y HN K+++ + + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 81 EALVKRFKNSLKWYHFDHNDKKLAMSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGA 140
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEA 181
VY++D VGSYER + G+ ++LIMPFLDNQ+ + P D L+ EA
Sbjct: 141 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTDGKVKRPLKYLTIEEA 199
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SATER I+ + LEI+++ KDG+ +E+ EL++D
Sbjct: 200 IKLVRDAFTSATERHIHVGDGLEILIVTKDGVRKEFFELKRD 241
>gi|299116145|emb|CBN76052.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 249
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 140/227 (61%), Gaps = 8/227 (3%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASS 61
++ + PY NNGGT VA+AG DYC+ AAD+R+S GY+ILSR+ +++ +L+ +A++
Sbjct: 22 SRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATA 81
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
G AD + L +LL Y+ + + M A+ ++LS LYY+R FP+Y+FN++GGLD
Sbjct: 82 GCWADTQGLLRLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDE 141
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL-------LLPAQDAVT 174
EG G VY YDAVGS+ERV + G G +L+ P LD +L + + + V
Sbjct: 142 EGIGAVYGYDAVGSFERVRVACAGGGLSLMQPVLD-RLDAAEAVTGAGGCGRAGREQPVV 200
Query: 175 PLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELR 221
+ EA+ LV+ F + ERDI +++EIVV+ + G RE ++L+
Sbjct: 201 AVGLEEALALVRRAFVAGGERDISLGDEVEIVVVTRQGHRRERLQLK 247
>gi|242786404|ref|XP_002480798.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
10500]
gi|218720945|gb|EED20364.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
10500]
Length = 253
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 142/237 (59%), Gaps = 16/237 (6%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD------- 54
++H +++PY +NGG+ + IAG+D+C+ A DTR ++GY+I SR K+ K+
Sbjct: 18 NREH-SFNPYTDNGGSTLGIAGSDFCILAGDTRSTSGYNINSRYAPKVFKIGGDDETGEG 76
Query: 55 -KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
V++ GF AD +AL++ L + +Y++QH K +S A Q LS LY KRFFPYY+
Sbjct: 77 AHIVLSVVGFAADGQALKERLDSIVKVYRYQHGKPISVKACAQRLSTILYSKRFFPYYAH 136
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA- 172
+LGGLD EG+G +Y+YD VGSYER + G+ S+LIMPFLDNQ+ + + + +
Sbjct: 137 AILGGLDEEGRGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNFKNQYIPGSGEGH 196
Query: 173 ------VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL LV+ F SA ER I + L+++++ KDGI Y L+KD
Sbjct: 197 ALERRTPAPLPRDTVEQLVRDAFTSAVERHIEVGDGLQMMIITKDGIQESYTPLKKD 253
>gi|254574222|ref|XP_002494220.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238034019|emb|CAY72041.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328353959|emb|CCA40356.1| 20S proteasome subunit beta 6 [Komagataella pastoris CBS 7435]
Length = 243
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 133/220 (60%), Gaps = 4/220 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ + A DTR +TGYSI SR K+ + D+ ++ ++GF AD
Sbjct: 24 FNPYSDNGGTVLGIAGEDFAILAGDTRHTTGYSINSRYEPKVFSVGDELLITANGFAADG 83
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
AL K + Y H K ++ + + + + LY KRFFPYY ++ GLD EGKG V
Sbjct: 84 DALVKRFRNQLKWYHFDHKKNLTIKSAARFIQHLLYGKRFFPYYVHTIIAGLDEEGKGAV 143
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL----LLPAQDAVTPLSEAEAVD 183
Y++D VGSYER + G ++LIMPFLDNQ+ + + A+ + L E +
Sbjct: 144 YSFDPVGSYEREQCRAGGGAASLIMPFLDNQVNFKNQMDPDSNGTAKKELKYLKLDEVIS 203
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LV+ F+SATER I + LEI+++ KDG+ EY L+KD
Sbjct: 204 LVRDAFSSATERHINVGDGLEILIVTKDGVRTEYYPLKKD 243
>gi|361131660|gb|EHL03312.1| putative proteasome component C5 [Glarea lozoyensis 74030]
Length = 263
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 143/237 (60%), Gaps = 18/237 (7%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC------ 56
K+H ++ PY +NGG+ +AI+G D+ + A DTR ++GY+I +R K+ K+
Sbjct: 29 KEH-SFYPYTDNGGSTLAISGNDFTIIAGDTRSTSGYNINTRYSPKVFKIGGTTSSQDDA 87
Query: 57 --VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 88 TLVLSVVGFAADGAALKERLDAIVKMYRYQHGKPMSVKACAQRLSTILYGKRFFPYYVTA 147
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL-------- 166
+LGGLD EGKG VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +
Sbjct: 148 ILGGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNYKNQYIPGSGEGHA 207
Query: 167 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L ++ + PL E DLVK F SA ER I + L+++++ K GI +Y+ L+KD
Sbjct: 208 LQEREKI-PLPRNEVEDLVKDAFDSAVERHIEVGDGLQMLIITKSGIEEKYLPLKKD 263
>gi|344229599|gb|EGV61484.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 242
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 133/221 (60%), Gaps = 5/221 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI SR KI + D VM ++GF AD
Sbjct: 22 FNPYSDNGGTVLGIAGKDFAVLAGDTRHVEGYSINSRYEPKIFNVGDDIVMTANGFAADG 81
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
KAL + Y+ HN K+ S + + + + LY KRFFPYY ++ GLD+EGKGC
Sbjct: 82 KALINSFKTQLKWYKFDHNDKRFSIQSAARYIRHLLYGKRFFPYYVSTLIAGLDDEGKGC 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSEAEAV 182
VY++D VGSYER + GS S+LIMPFLDNQ+ + + V L E +
Sbjct: 142 VYSFDPVGSYEREQCRAGGSASSLIMPFLDNQVNFKNQYEPDSDGKVKKPLRYLELDEVL 201
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+LVK F+SATER I + LEI ++ K+G+ EY L++D
Sbjct: 202 ELVKDAFSSATERHIQVGDGLEIHIVTKEGVRVEYFPLKRD 242
>gi|50427419|ref|XP_462322.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
gi|49657992|emb|CAG90828.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
Length = 242
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI SR KI + D M ++GF AD
Sbjct: 22 FNPYSDNGGTVLGIAGEDFSVLAGDTRQVVGYSINSRYEPKIFDVGDDIAMTANGFAADG 81
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL + Y+ H K++S + + + + LY KRFFPYY ++ GLD+EGKG
Sbjct: 82 AALIDRFRNQLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPYYVSTLIAGLDDEGKGA 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P + LS E
Sbjct: 142 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FVPGTNGTEKKELRYLSLDEV 200
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LVK F+SATER IY + LEI ++ KDGI +EY L++D
Sbjct: 201 LQLVKDAFSSATERHIYVGDGLEIFIITKDGIRKEYYPLKRD 242
>gi|363755242|ref|XP_003647836.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891872|gb|AET41019.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
Length = 242
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 135/222 (60%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PYD+NGGT + IAG D+ V A DTR +TGYSI SR+ K+ D +++++GF AD
Sbjct: 22 FNPYDDNGGTILGIAGEDFAVIAGDTRHTTGYSINSRNEPKVFDCGDNILISANGFAADG 81
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL K Y HN K+M+ + + + + LY KR FPYY ++ GLD +GKG
Sbjct: 82 DALVKKFKNNLKWYHFDHNNKKMTLKSAARNIQHLLYGKRMFPYYVHTIIAGLDEDGKGA 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEA 181
VY++D VGSYER + G+ +++IMPFLDNQ+ + P P LS E
Sbjct: 142 VYSFDPVGSYEREQCRAGGAAASIIMPFLDNQVNFKNQ-YEPDSKGTKPKSIRFLSLDEV 200
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++LV+ F SATER I+ + L+I+++ K+G+ EY L+KD
Sbjct: 201 IELVRDAFTSATERHIHVGDSLQIMIITKEGVKEEYHSLKKD 242
>gi|225714644|gb|ACO13168.1| Proteasome subunit beta type-1 precursor [Lepeophtheirus salmonis]
Length = 238
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
M ++ PY +NGGT + IAG D+ V A+DTR+ Y ILSRD K+ L V+ +
Sbjct: 20 MNPHQVSFQPYQDNGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGA 79
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SG DV ++ +R Y + H K+MS A+ Q+LS TLY KRFFPYY NVL GLD
Sbjct: 80 SGCWCDVLTFVRVAESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLD 139
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+EG+G ++TYD VG E+V S G+ +I P LDN ++ + + LS E
Sbjct: 140 DEGRGAIFTYDPVGHCEKVKISCGGASMEMIQPILDNVIEKKN----MTNAELVDLSIDE 195
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
V++V CF SA ER I T + + ++ KDGI + + LR+D
Sbjct: 196 TVNIVHDCFISAAERQIQTGDGVVFKIITKDGIETKRVGLRRD 238
>gi|157864139|ref|XP_001680783.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
gi|68124075|emb|CAJ02057.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
Length = 247
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 135/218 (61%), Gaps = 6/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSR-DYSKIIKLADKCVMASSGFQAD 66
WSPY +NGGT AIAG D+ + A DTR++ Y + SR D SKI +L MAS+G QAD
Sbjct: 34 WSPYHDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQAD 93
Query: 67 VKALQKLLAARHLIYQHQHNKQMS-CPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
LQ++L R YQ+ + ++ A+ QL+S LY++RFFPYY+FN++ GLD EG G
Sbjct: 94 RLQLQQMLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEEGHG 153
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
Y+YDAVGS E Y ++GS ++ + P LD + + AQ A +++ E + L+
Sbjct: 154 VCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQH---MTAQ-APPEMTKEETLALL 209
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F A ERDIYT + + ++ KDG+ RE ELRKD
Sbjct: 210 KNAFTGAAERDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|402077428|gb|EJT72777.1| proteasome component C5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 264
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 142/238 (59%), Gaps = 18/238 (7%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC----- 56
T+QH + PY +NGG+ +AIAGAD+ + A DTRM++GYSI +R Y K+ ++
Sbjct: 29 TRQH-RFDPYTDNGGSTLAIAGADFAIMAGDTRMASGYSINTRFYPKVFRIGGTTSDQKD 87
Query: 57 ---VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
V++ GF AD +AL++ L A +Y+++H K MS A + LS LY KRFFPYY+
Sbjct: 88 ATLVLSVVGFAADGEALKERLDAICKMYRYRHGKPMSAKACAKRLSTILYQKRFFPYYTH 147
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 173
+L GLD EGKG VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P
Sbjct: 148 AILAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YIPGSGEG 206
Query: 174 TPLSEAEAVD--------LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L E E V LVK F A ER I + L+++++ KDGI + L++D
Sbjct: 207 HDLQERERVPLPRDQVEILVKDAFDGAVERHIEVGDGLQMMIITKDGIEEVILPLKQD 264
>gi|68065946|ref|XP_674957.1| proteasome subunit beta type 1 [Plasmodium berghei strain ANKA]
gi|56493858|emb|CAI00630.1| proteasome subunit beta type 1, putative [Plasmodium berghei]
Length = 267
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 142/241 (58%), Gaps = 30/241 (12%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
W+PY +NGGT + + G +Y + A DTR+S YSI +R+ KI K+ DKC++ SSG Q+D+
Sbjct: 32 WNPYIDNGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDI 91
Query: 68 KALQKLLAAR---HLIYQH----------------------QHNKQMSCPAMGQLLSNTL 102
K L LL L+Y + +H+ S + +LL TL
Sbjct: 92 KTLHSLLQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTL 151
Query: 103 YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP 162
Y +RFFPYY+FN+L G+D GKG +Y+YDA+GSY + ++ GSGS+LI+P LDN+++
Sbjct: 152 YSRRFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRVEQK 211
Query: 163 SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRK 222
+ L+ + + ++ VK SATERDIYT +K EI +++ GI+ ++L++
Sbjct: 212 NQLI-----KNMDFNLRDDINFVKDAMTSATERDIYTGDKAEIYIIDNLGINTTLLDLKQ 266
Query: 223 D 223
D
Sbjct: 267 D 267
>gi|367043468|ref|XP_003652114.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
gi|346999376|gb|AEO65778.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
Length = 265
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 142/231 (61%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL----ADK----CVMA 59
+ PY +NGG+ +AIAGAD+ + A DTR+++GYSI SR + K+ K+ AD+ V++
Sbjct: 35 FDPYADNGGSTLAIAGADFTIMAGDTRLTSGYSINSRFHPKLFKIGGSTADQKDATLVLS 94
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL++ L A +Y+++H K MS A Q LS LY KRFFPYY +LGGL
Sbjct: 95 VVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVHAILGGL 154
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA------- 172
D +GKG VY+YD VGSYER + G+ ++LIMPFLDNQ+ + + + +
Sbjct: 155 DEDGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPNSGEGHALQERE 214
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ AE LVK F A ER I + L+++ + KDGI + L+KD
Sbjct: 215 RRPLTRAEVEMLVKDAFDGAVERHIEVGDGLQMMAITKDGIEEIVLPLKKD 265
>gi|290562593|gb|ADD38692.1| Proteasome subunit beta type-1 [Lepeophtheirus salmonis]
Length = 238
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
M ++ PY +NGGT + IAG D+ V A+DTR+ Y ILSRD K+ L V+ +
Sbjct: 20 MNPHQVSFQPYQDNGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGA 79
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SG DV ++ +R Y + H K+MS A+ Q+LS TLY KRFFPYY NVL GLD
Sbjct: 80 SGCWCDVLTFIRVAESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLD 139
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+EG+G ++TYD VG E+V S G+ +I P LDN ++ + + LS E
Sbjct: 140 DEGRGAIFTYDPVGHCEKVKISCGGASMEMIQPILDNVIEKKN----MTNAELVDLSIDE 195
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
V++V CF SA ER I T + + ++ KDGI + + LR+D
Sbjct: 196 TVNIVHDCFISAAERQIQTGDGVVFKIITKDGIETKRVGLRRD 238
>gi|403224082|dbj|BAM42212.1| proteasome subunit [Theileria orientalis strain Shintoku]
Length = 220
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 139/223 (62%), Gaps = 9/223 (4%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
+ ++PY NNGGT +A +Y V AADTR+S Y I +R +K++KL DKC++ +SG
Sbjct: 5 RPEEGFNPYVNNGGTVIAATWKNYAVIAADTRLSLRYLIHTRYSTKLLKLTDKCILGTSG 64
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
QAD+ ALQ ++ + +Y+ H+K+ + A+ QLLS LY +RFFPYY+FN+L GLD
Sbjct: 65 MQADMLALQSVIERQIEMYRFTHHKEPTFGAIAQLLSTVLYGRRFFPYYTFNILCGLDEN 124
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
G G YDAVG+Y Y++QG+ S+L++P LDN L + + P +++ L V
Sbjct: 125 GNGVTCNYDAVGNYNYEKYAAQGTSSSLVVPILDNLLNGNNQQVKPQINSLEDL-----V 179
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHRE--YMELRKD 223
+LVK SA ERDI T + E+VV DG+ E MELR D
Sbjct: 180 NLVKNAMVSAVERDICTGDSAELVVC--DGVVHEPVRMELRVD 220
>gi|365990732|ref|XP_003672195.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
gi|343770970|emb|CCD26952.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
Length = 241
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 135/223 (60%), Gaps = 7/223 (3%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
A++PY +NGGT + IAG D+ + A DTR +T YSI SR K+ D V++++GF AD
Sbjct: 20 AFNPYTDNGGTILGIAGEDFAILAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAAD 79
Query: 67 VKALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
+AL K Y HN K++S + + + + LY KRFFPYY ++ GLD GKG
Sbjct: 80 GEALVKRFKNSLKWYHFDHNDKKLSMKSAARNIQHLLYGKRFFPYYVHTIIAGLDENGKG 139
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAE 180
VY++D VGSYER + G+ ++LIMPFLDNQ+ + P D LS E
Sbjct: 140 AVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FEPGTDGKVKKPLKYLSIDE 198
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SATER I+ + LEI+++ KDG+ +E+ EL++D
Sbjct: 199 VIKLVRDSFTSATERHIHVGDGLEILIVTKDGVRKEFYELKRD 241
>gi|398010249|ref|XP_003858322.1| proteasome beta 6 subunit, putative [Leishmania donovani]
gi|322496529|emb|CBZ31598.1| proteasome beta 6 subunit, putative [Leishmania donovani]
Length = 247
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 135/218 (61%), Gaps = 6/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSR-DYSKIIKLADKCVMASSGFQAD 66
WSPY +NGGT AIAG D+ + A DTR++ Y + SR D SKI +L MAS+G QAD
Sbjct: 34 WSPYQDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQAD 93
Query: 67 VKALQKLLAARHLIYQHQHNKQMS-CPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
LQ++L R YQ+ + ++ A+ QL+S LY++RFFPYY+FN++ GLD EG G
Sbjct: 94 RLQLQQMLKYRVKWYQYNNGGRVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEEGHG 153
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
Y+YDAVGS E Y ++GS ++ + P LD + + AQ A +++ E + ++
Sbjct: 154 VCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQH---MTAQ-APPEMTKEETLAML 209
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F A ERDIYT + + ++ KDG+ RE ELRKD
Sbjct: 210 KNAFTGAAERDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|146070767|ref|XP_001463096.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
gi|134067179|emb|CAM65445.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
Length = 247
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 135/218 (61%), Gaps = 6/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSR-DYSKIIKLADKCVMASSGFQAD 66
WSPY +NGGT AIAG D+ + A DTR++ Y + SR D SKI +L MAS+G QAD
Sbjct: 34 WSPYQDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQAD 93
Query: 67 VKALQKLLAARHLIYQHQHNKQMS-CPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
LQ++L R YQ+ + ++ A+ QL+S LY++RFFPYY+FN++ GLD EG G
Sbjct: 94 RLQLQQMLKYRVKWYQYNNGGRVPPTKAIAQLMSTLLYHRRFFPYYTFNMVVGLDEEGHG 153
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
Y+YDAVGS E Y ++GS ++ + P LD + + AQ A +++ E + ++
Sbjct: 154 VCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQH---MTAQ-APPEMTKEETLAML 209
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F A ERDIYT + + ++ KDG+ RE ELRKD
Sbjct: 210 KNAFTGAAERDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|212543349|ref|XP_002151829.1| proteasome component Prs3, putative [Talaromyces marneffei ATCC
18224]
gi|210066736|gb|EEA20829.1| proteasome component Prs3, putative [Talaromyces marneffei ATCC
18224]
Length = 252
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 143/236 (60%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
++H +++PY +NGG+ + IAG+D+C+ A DTR ++GY+I +R K+ K+
Sbjct: 18 REH-SFNPYTDNGGSTLGIAGSDFCILAGDTRSTSGYNINTRYAPKLFKIGGDDETGEGA 76
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD AL++ L + +Y++QH K ++ A Q LS LY KRFFPYY++
Sbjct: 77 HIVLSVVGFAADGHALKERLDSIVKVYRYQHGKPITVNACAQRLSTILYSKRFFPYYAYA 136
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+LGGLD EG+G +Y+YD VGSYER + G+ S+LIMPFLDNQ+ + + + +
Sbjct: 137 ILGGLDEEGRGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNFKNQYIPESGEGHA 196
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL + LV+ F SA ER I + L+++++ KDGI Y L+KD
Sbjct: 197 LERRTPAPLPQDTVEQLVRDAFTSAVERHIEVGDGLQMMIITKDGIQETYTPLKKD 252
>gi|190348096|gb|EDK40488.2| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI +R ++ + D VM ++GF AD
Sbjct: 22 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVVGYSINTRYEPRVFDVGDNIVMTANGFDADG 81
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL Y+ HN K++S + + + + LY KRFFPYY ++ GLD+EG+G
Sbjct: 82 AALIDRFRNSLKWYKFDHNGKRLSISSAARYIQHLLYGKRFFPYYVSTLIAGLDDEGRGA 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P D + LS E
Sbjct: 142 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YVPGSDGKKKKELRYLSLEEV 200
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SATER IY + LEI+++ K+G+ EY L++D
Sbjct: 201 IQLVRDAFTSATERHIYVGDGLEILIVTKEGVRTEYFPLKRD 242
>gi|340517495|gb|EGR47739.1| proteosome beta subunit protease [Trichoderma reesei QM6a]
Length = 264
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 140/236 (59%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC------ 56
+QH ++PY +NGG+ +AI+GAD+ + A DTR ++GYSI SR K+ K+
Sbjct: 30 RQH-RFNPYSDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGTTATQEDA 88
Query: 57 --VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL+ L IY+++H K MS A + LS LY KRFFPYY+
Sbjct: 89 TIVLSVCGFAADGEALRDRLDTVCKIYRYRHGKPMSLNACAKRLSTILYQKRFFPYYTHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+LGGLD EGKG VY+YD VGSYER + G+ +LIMPFLDNQ+ + + + +
Sbjct: 149 MLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHE 208
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ E LVK F A ER I + L+++++ KDGI ++ L+KD
Sbjct: 209 LKERERRPLTRPEVETLVKDAFDGAVERHIEVGDSLQMLIITKDGIEEVFLPLKKD 264
>gi|452980444|gb|EME80205.1| hypothetical protein MYCFIDRAFT_49844 [Pseudocercospora fijiensis
CIRAD86]
Length = 263
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 142/241 (58%), Gaps = 26/241 (10%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
+QH + PY +NGG+ + I+G D+ + A DTR ++GY+I +R K+ K+
Sbjct: 29 RQH-GFYPYTDNGGSTLGISGEDFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPDHVGA 87
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
K V++ GF AD AL++ L +Y++QH K +S A Q LS+ LY KRFFPYY
Sbjct: 88 KIVLSVVGFAADGNALKERLDTIVKMYKYQHGKDISIGACAQRLSHILYGKRFFPYYVTA 147
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--------KSPSPL- 165
+LGG+D EGKG +Y+YD VGSYER S G+ S+LI PFLDNQ+ ++P L
Sbjct: 148 ILGGIDEEGKGALYSYDPVGSYEREQCRSAGAASSLITPFLDNQVNLKNQHDPQAPQGLN 207
Query: 166 ---LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRK 222
L+P PLS A DLVK F SA ER I + L+++++ +DGI Y L+K
Sbjct: 208 KTALVP-----RPLSRAHVEDLVKDAFTSAVERHIEVGDGLQMMIITRDGIQETYSPLKK 262
Query: 223 D 223
D
Sbjct: 263 D 263
>gi|399219027|emb|CCF75914.1| unnamed protein product [Babesia microti strain RI]
Length = 214
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 134/216 (62%), Gaps = 5/216 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY NNGGT +A A D+ V ADTR+S GYSI SR SK+ +L D+ ++ ++G AD
Sbjct: 4 FNPYVNNGGTVIAAAKDDFAVLVADTRLSVGYSIHSRRVSKVTRLTDRIIIGTAGMNADT 63
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
AL K L A+ IYQ++H++ + QLLS LY KRFFPYY+FN+L G+D +G+ V
Sbjct: 64 IALHKQLEAQVTIYQNKHHENPDIHCISQLLSVILYGKRFFPYYTFNLLVGIDMKGQAYV 123
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+TYDA+G++E YS+ G+GS LI LD+++ + + P + + V+L+K
Sbjct: 124 FTYDAIGNFESTAYSAHGTGSNLITSILDSKIGCNN-----QKQGTPPNTLEDYVNLLKD 178
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+SA ERDIYT + EI +LN + LR D
Sbjct: 179 AISSAAERDIYTGDSAEIFILNPNVSQPILFPLRGD 214
>gi|253747271|gb|EET02070.1| Proteasome subunit beta type 1 [Giardia intestinalis ATCC 50581]
Length = 220
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 132/216 (61%), Gaps = 9/216 (4%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY +NGGT +AIAG D+ + A DTR+S GY+ILSR+ K+ + DK V A+SG ADV
Sbjct: 14 FDPYTDNGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADV 73
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+ L K + Y + ++M+ +LLS +YY+R FP+Y+ +++ G+D+EGKG V
Sbjct: 74 QRLIKHMKIESTDYHLKTQREMAIEQFTRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGAV 133
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YD +GS R Y S G+G+ +I P LD +LP DA ++ A +L+++
Sbjct: 134 YSYDVIGSTLRTRYGSAGTGNAMICPILDEA-------ILPKSDA--EITREFAFELIQS 184
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F S ERDIYT + + + ++ DGI ELRKD
Sbjct: 185 AFKSCAERDIYTGDSVVAMCISADGIQERTFELRKD 220
>gi|353238864|emb|CCA70796.1| probable PRE7-20S proteasome subunit(beta6) [Piriformospora indica
DSM 11827]
Length = 250
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 4/210 (1%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
M+ Q ++PY NGGT +AIAG D+ V A DTR S GY+I +R K+ +L DK V+A
Sbjct: 1 MSAQERRFNPYTENGGTILAIAGQDFTVIAGDTRQSEGYNIQTRYAPKVFRLTDKAVLAV 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+GF AD + + R YQH HNK+M A+ +L+ LY KRFFPYY +N+LGG++
Sbjct: 61 NGFAADGNMFVQKVQQRLEWYQHAHNKEMPLRAIARLIQTMLYAKRFFPYYVYNILGGIE 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP--LSE 178
++G G VY++D VGSYER + G+ +L+ PFLDNQ+ + LP P L
Sbjct: 121 DDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQ--LPPSGGAHPKHLPL 178
Query: 179 AEAVDLVKTCFASATERDIYTANKLEIVVL 208
E + LV F ATER I + LEI ++
Sbjct: 179 KEVLSLVIDSFTGATERHIEVGDGLEIYIV 208
>gi|302922344|ref|XP_003053446.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734387|gb|EEU47733.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 264
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 137/231 (59%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC--------VMA 59
++PY +NGG+ +AI+GAD+ + A DTR ++GYSI SR K+ K+ V++
Sbjct: 34 FNPYTDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMSPKVFKIGGTTASQDDATLVLS 93
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL+ L IY+++H K M+ A + LS LY KRFFPYYS +LGGL
Sbjct: 94 VVGFAADGEALRDHLDTICKIYRYRHGKPMTVNACAKRLSTVLYGKRFFPYYSHAMLGGL 153
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA------- 172
D EGKG VY+YD VGSYER + G+ +LIMPFLDNQ+ + + + +
Sbjct: 154 DEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPESGEGHELKERE 213
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ E L+K F A ER I + L++V++ +DGI ++ L+KD
Sbjct: 214 RRPLTRTEVETLIKDAFDGAVERHIEVGDNLQMVIITRDGIEETFIPLKKD 264
>gi|146415774|ref|XP_001483857.1| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI +R ++ + D VM ++GF AD
Sbjct: 22 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVVGYSINTRYEPRVFDVGDNIVMTANGFDADG 81
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL Y+ HN K++S + + + + LY KRFFPYY ++ GLD+EG+G
Sbjct: 82 AALIDRFRNSLKWYKFDHNGKRLSILSAARYIQHLLYGKRFFPYYVSTLIAGLDDEGRGA 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P D + LS E
Sbjct: 142 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YVPGSDGKKKKELRYLSLEEV 200
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SATER IY + LEI+++ K+G+ EY L++D
Sbjct: 201 IQLVRDAFTSATERHIYVGDGLEILIVTKEGVRTEYFPLKRD 242
>gi|154331019|ref|XP_001561949.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059271|emb|CAM36970.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 333
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 137/218 (62%), Gaps = 6/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSR-DYSKIIKLADKCVMASSGFQAD 66
WSPY +NGGT AIAG D+ + A DTR++ + + +R D SKI +L MAS+G QAD
Sbjct: 120 WSPYQDNGGTTAAIAGNDFVLLAGDTRLNGNFCLHTRHDESKIFQLTPHTYMASNGMQAD 179
Query: 67 VKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
LQ+LL R YQ+ + ++ S ++ QLLS LY++RFFPYY+FN++ GLD EG G
Sbjct: 180 RLQLQQLLKYRIKWYQYNNGGKVPSTKSIAQLLSTVLYHRRFFPYYTFNMIVGLDEEGHG 239
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
Y+YDAVGS E + Y ++GS ++ + P LD + + Q A + +S+ EA+ ++
Sbjct: 240 VCYSYDAVGSTEPLLYGTRGSAASFVEPLLDCLINRQH---MTCQ-APSEMSKEEALVML 295
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F A ERDIYT + + + + KDG+ +E LRKD
Sbjct: 296 KNAFTGAAERDIYTGDSVSFITITKDGVQQESFALRKD 333
>gi|452837570|gb|EME39512.1| hypothetical protein DOTSEDRAFT_180093 [Dothistroma septosporum
NZE10]
Length = 263
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 138/236 (58%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLA--------D 54
+QH A+ PY +NGG+ + I+G D+ V A DTR ++GY+I +R K+ K+
Sbjct: 29 RQH-AFYPYTDNGGSTLGISGTDFTVLAGDTRSTSGYNINTRYEPKLFKIGGDGPENVGS 87
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
K V++ GF AD KAL++ L +Y++QH K +S A Q LS+ LY KRFFPYY
Sbjct: 88 KIVLSVVGFAADGKALKERLDTVVKMYKYQHGKDISVHACAQRLSHILYSKRFFPYYVTA 147
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-------SPSPLLL 167
+LGG+D EGKG +Y+YD VGSYER + G+ S+LIMPFLDNQ+ + +
Sbjct: 148 ILGGIDEEGKGALYSYDPVGSYEREATRAAGAASSLIMPFLDNQVNLKNQYDPTQAQGFG 207
Query: 168 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
Q PL LVK F SA ER I + L+++++ K+GI Y L++D
Sbjct: 208 KEQLVPKPLDRTTTEALVKDAFTSAVERHIEVGDGLQMMIITKEGIEERYAPLKRD 263
>gi|336369489|gb|EGN97830.1| hypothetical protein SERLA73DRAFT_182590 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382272|gb|EGO23422.1| hypothetical protein SERLADRAFT_469320 [Serpula lacrymans var.
lacrymans S7.9]
Length = 253
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 133/218 (61%), Gaps = 4/218 (1%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q +++PY NGGT +AIAGAD+ V A DTR S GYSI +R K+ +L D+ V+A +GF
Sbjct: 11 QQRSFNPYSENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDRAVLAVNGF 70
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H+K M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 71 AADGNMFVKKVKQRLEWYRHAHSKDMPLRAIARLIQTMLYARRFFPYYVYNILGGIEEDG 130
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--KSPSPLLLPAQDAVTPLSEAEA 181
G VY++D VGSYER + G+ +L+ PFLDNQ+ K+ +P L + A PL
Sbjct: 131 TGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPALGTSHPAHLPLP--TV 188
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYME 219
+ +V F SATER I + LE+ V+ G + + +E
Sbjct: 189 LSIVIDSFTSATERHIEVGDGLEMYVVLAKGRNLQGLE 226
>gi|392572662|gb|EIW65807.1| hypothetical protein TREMEDRAFT_46043 [Tremella mesenterica DSM
1558]
Length = 270
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 125/209 (59%), Gaps = 6/209 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY NGGT +AIAGAD+ V A DTR S GYSI +R K+ +L D V+A++GF AD
Sbjct: 23 FNPYSENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYARKVFQLTDNAVLATNGFAADG 82
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
K + L YQH H+KQM A+ +L+ LY +RFFPYY +N+LGG++ +G G V
Sbjct: 83 KNFVRRLKQSLEWYQHNHHKQMGLKAIARLIQTMLYGRRFFPYYVYNILGGIEEDGSGAV 142
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPAQDAVTPLSEAEAVD 183
Y++D VGSYER + G+ L+ PFLDNQ+ + P P P PLS +
Sbjct: 143 YSFDPVGSYEREACRAAGAAQALVQPFLDNQIYFKNQQPEPGAEPFVPGRLPLS--TVLG 200
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDG 212
LV F SATER I + +EI ++ G
Sbjct: 201 LVVDSFTSATERHIEVGDGIEIFIVMAKG 229
>gi|410075834|ref|XP_003955499.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
gi|372462082|emb|CCF56364.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
Length = 241
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 135/222 (60%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR +T YSI SR K+ D V++++GF AD
Sbjct: 21 FNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADG 80
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
+AL K Y HN K++S + + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 81 EALVKRFKNSIKWYHFDHNDKKLSIKSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGA 140
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEA 181
VY++D VGSYER + G+ ++LIMPFLDNQ+ + P D L+ E
Sbjct: 141 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGSDGKVKRPLKYLNIDEV 199
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SATER I+ + LEI+++ K+G+ +EY +L++D
Sbjct: 200 ISLVRDAFTSATERHIHVGDGLEILIVTKEGVRKEYYDLKRD 241
>gi|295672922|ref|XP_002797007.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282379|gb|EEH37945.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 266
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 139/247 (56%), Gaps = 35/247 (14%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
K H ++PY +NGG+ + IAG DY + A DTR TGYSI +R K+ K+ +
Sbjct: 29 KHHHGFNPYTDNGGSTLGIAGEDYAILAGDTRSVTGYSINTRYSPKLFKIGEDDEGGEGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y+++H K MS A Q LS LY KRFFPYY
Sbjct: 89 HLVLSVVGFAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILYSKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--------------- 159
+LGG+D +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+
Sbjct: 149 ILGGIDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYVAGTGEGNA 208
Query: 160 --KSP-SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHRE 216
K P P PA+DA+ LV F SA ER I + L+I+++ KDGI
Sbjct: 209 LDKQPREPQPQPAEDALQ---------LVNDAFTSAVERHIEVGDGLQIMLITKDGIMEM 259
Query: 217 YMELRKD 223
Y L+KD
Sbjct: 260 YHPLKKD 266
>gi|116206868|ref|XP_001229243.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183324|gb|EAQ90792.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 265
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 140/231 (60%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL----ADK----CVMA 59
+ PY +NGG+ +AIAGA + + A DTR+++GYSI SR + K+ K+ AD+ V++
Sbjct: 35 FDPYTDNGGSTLAIAGAKFSILAGDTRLTSGYSINSRHHPKLFKIGGTTADQKDATMVLS 94
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL++ L +Y+++H K MS A Q LS LY KRFFPYYS +LGGL
Sbjct: 95 VVGFAADGEALKERLDTICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYSHAILGGL 154
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA------- 172
D EG G VY+YD VGSYER + G+ ++LIMPFLDNQ+ + + + +
Sbjct: 155 DEEGNGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYIPNSGEGHALQERE 214
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ +E LVK F A ER I + L+++++ DGI + L+KD
Sbjct: 215 RRPLTRSEVEVLVKDAFDGAVERHIEVGDGLQMMIITNDGIEEILLPLKKD 265
>gi|389626457|ref|XP_003710882.1| proteasome component C5 [Magnaporthe oryzae 70-15]
gi|351650411|gb|EHA58270.1| proteasome component C5 [Magnaporthe oryzae 70-15]
gi|440470291|gb|ELQ39366.1| proteasome component C5 [Magnaporthe oryzae Y34]
gi|440486750|gb|ELQ66588.1| proteasome component C5 [Magnaporthe oryzae P131]
Length = 265
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 141/236 (59%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL----ADKC-- 56
+QH ++PY +NGG+ +AIAG D+ + A DTRM++GYSI +R Y K+ K+ AD
Sbjct: 31 RQH-GFNPYTDNGGSTLAIAGDDFAIMAGDTRMASGYSINTRFYPKVFKIGGTTADNSDA 89
Query: 57 --VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A IY+++H K M+ A + LS LY KRFFPYY+
Sbjct: 90 TLVLSVVGFAADGEALKERLDAICKIYRYRHGKPMTVKACAKRLSTILYQKRFFPYYTHA 149
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA----- 169
+L G+D EG G VY+YD VGSYER + G+ ++LIMPFLDNQ+ + + +
Sbjct: 150 ILAGIDEEGHGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPGSGTGHD 209
Query: 170 --QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ PL LVK F A ER I + L+++++ KDGI M L+KD
Sbjct: 210 LQERERKPLPRETVETLVKDAFDGAVERHIEVGDGLQMMIITKDGIEEVIMPLKKD 265
>gi|385303180|gb|EIF47271.1| proteasome component c5 [Dekkera bruxellensis AWRI1499]
Length = 243
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 133/220 (60%), Gaps = 4/220 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR + GYSI SR K+ + D +++++GF AD
Sbjct: 24 FNPYQDNGGTILGIAGEDFAVLAGDTRQTVGYSIDSRYEPKVHNVGDNLLLSANGFSADG 83
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K+ + Y +NK MS + +L+ + LY KR FPYY +L GLD EGKG +
Sbjct: 84 VQLVKVFQNQLKWYHFDNNKDMSVDSAARLIQHLLYGKRMFPYYVSTILAGLDKEGKGAI 143
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA----QDAVTPLSEAEAVD 183
Y++D VGSYER + G+ ++LIMPFLDNQ+ + + + Q + L E +
Sbjct: 144 YSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQMDPESNGTKQRPIKYLKLDEVIQ 203
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LV+ F SATER I + L+I+V+ KDG+ EY L++D
Sbjct: 204 LVRDAFTSATERHIEVGDGLQILVVTKDGVXTEYYPLKRD 243
>gi|255938694|ref|XP_002560117.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584738|emb|CAP74264.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 259
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 138/238 (57%), Gaps = 20/238 (8%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
KQH ++ PY +NGG+ + I GAD+ + A DTR ++GY+I SR K+ K+
Sbjct: 25 KQH-SFYPYTDNGGSTLGITGADFAILAGDTRSTSGYNINSRMVPKVFKIGGDDETGEGA 83
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+++ GF AD AL++ L +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 84 NIILSVVGFAADGNALKEKLDTMVRMYKYQHGKSMSVGACAQRLSTILYEKRFFPYYVHA 143
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP---------L 165
+L GLD EG G +Y+YD VGSYER + G+ S+LIMPFLDNQ+ S +
Sbjct: 144 ILAGLDEEGVGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNSKNQYIPGSGEGHA 203
Query: 166 LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L+P + PL + A LVK F SA ER I + L++V++ ++GI + L++D
Sbjct: 204 LVPKK--AEPLDKETATKLVKDAFTSAVERHIEVGDGLQLVIVTREGIEEVFHALKQD 259
>gi|255714573|ref|XP_002553568.1| KLTH0E01826p [Lachancea thermotolerans]
gi|238934950|emb|CAR23131.1| KLTH0E01826p [Lachancea thermotolerans CBS 6340]
Length = 242
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 135/221 (61%), Gaps = 5/221 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR +T YSI SR K+ D +++++GF AD
Sbjct: 22 FNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNILISANGFAADG 81
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL K Y HN K++S + + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 82 NALVKRFQNSLKWYHFDHNDKKLSMRSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGA 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA----VTPLSEAEAV 182
VY++D VGSYER + G+ ++LIMPFLDNQ+ + + V L+ E V
Sbjct: 142 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPDSHGTKRKHVKFLTVEEVV 201
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LV+ F+SATER I+ + +EI+++ K+G+ +E+ EL++D
Sbjct: 202 QLVRDAFSSATERHIHVGDGVEILIVTKEGVRKEFFELKRD 242
>gi|449548524|gb|EMD39490.1| hypothetical protein CERSUDRAFT_80861 [Ceriporiopsis subvermispora
B]
Length = 252
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 126/208 (60%), Gaps = 1/208 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q ++PY +NGGT +AIAGAD+ V A DTR S GYSI +R K+ +L D+ V+A +GF
Sbjct: 10 QQRQFNPYSDNGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVFRLTDRAVLAVNGF 69
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 70 AADGNMFVKKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYAQRFFPYYVYNILGGIEEDG 129
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
G VY++D VGSYER + G+ +L+ PFLDNQ+ + P Q L ++ +
Sbjct: 130 SGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQAAAPNQPHPAHLPLSDVLA 189
Query: 184 LVKTCFASATERDIYTANKLEI-VVLNK 210
+V F SATER I + LEI VVL K
Sbjct: 190 IVIDSFTSATERHIEVGDGLEIYVVLAK 217
>gi|409040369|gb|EKM49857.1| hypothetical protein PHACADRAFT_265596 [Phanerochaete carnosa
HHB-10118-sp]
Length = 252
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 126/218 (57%), Gaps = 18/218 (8%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q ++PY NGGT +AIAGAD+ V A DTR S GYSI +R K+ KL D+ V+A +GF
Sbjct: 10 QERQFNPYTENGGTILAIAGADFSVVAGDTRQSEGYSIQTRYAPKVHKLTDRAVLAVNGF 69
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 70 AADGNMFVKKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYGQRFFPYYVYNILGGIEEDG 129
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL---------KSPSPLLLPAQDAVT 174
G +Y++D VGSYER + G+ L+ PFLDNQ+ SP P+ LP QD ++
Sbjct: 130 TGAIYSFDPVGSYERETCRAAGAAMALVQPFLDNQIYFKNQQAPADSPHPVHLPLQDVLS 189
Query: 175 PLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDG 212
+V F SATER I + LEI V+ G
Sbjct: 190 ---------IVIDSFTSATERHIEVGDGLEIYVILAKG 218
>gi|61612096|gb|AAX47290.1| proteasome beta 1 subunit [Clonorchis sinensis]
Length = 217
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 133/219 (60%), Gaps = 7/219 (3%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRM--STGYSILSRDYSKIIKLADKCVMASSGFQ 64
+ PY NGGT + I+G D+ + A+DTR+ Y I SR+ + K+ + V+A++GF
Sbjct: 4 GFYPYSANGGTVMGISGDDFALLASDTRLCAEDRYFIYSRNSPHLYKMGNGKVLATTGFH 63
Query: 65 ADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 124
DV L KLL R Y++ H K++S A LLS TLY +RFFP+Y ++LGGLD EG+
Sbjct: 64 GDVLTLTKLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSILGGLDEEGR 123
Query: 125 GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDL 184
G VY YD VGS+ERV ++ GS ++ PFLD++++ + + PL +AEA+ L
Sbjct: 124 GAVYRYDPVGSFERVKCAAAGSSGVILQPFLDHRVEGKN-----LSSGLPPLEKAEAIKL 178
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F SA ERDI + + I V+ +DGI + LR+D
Sbjct: 179 AKDIFISAAERDINCGDAVLIQVITRDGIEEFHFPLRRD 217
>gi|358395926|gb|EHK45313.1| hypothetical protein TRIATDRAFT_131680 [Trichoderma atroviride IMI
206040]
Length = 263
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 140/236 (59%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC------ 56
++H A++PY +NGG+ +AI+GAD+ + A DTR ++GYSI SR K+ K+
Sbjct: 29 REH-AFNPYTDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMSPKVFKIGGTTASQDDA 87
Query: 57 --VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL+ L IY+++H K MS A + LS LY KRFFPYY+
Sbjct: 88 TIVLSVCGFAADGEALRDRLDTICKIYRYRHGKPMSLNACAKRLSTILYQKRFFPYYTHA 147
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+LGGLD EG G VY+YD VGSYER + G+ +LIMPFLDNQ+ + + + +
Sbjct: 148 MLGGLDEEGTGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHD 207
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS + +VK F A ER I + L+++++ KDGI ++ L+KD
Sbjct: 208 LKERERRPLSRPQVETIVKDAFDGAVERHIEVGDTLQMLIITKDGIEEAFLPLKKD 263
>gi|156847580|ref|XP_001646674.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
gi|156117353|gb|EDO18816.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
Length = 242
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR +T YSI SR K+ D V++++GF AD
Sbjct: 22 FNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADG 81
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
+AL K Y +N K +S + + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 82 EALVKRFKNSIKWYHFDNNDKTLSLSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGA 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEA 181
VY++D VGSYER + G+ ++LIMPFLDNQ+ + P D LS E
Sbjct: 142 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPDSDGTVKRPLKFLSIDEV 200
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SATER I+ + LEI+++ KDG+ +E+ EL++D
Sbjct: 201 IRLVRDAFTSATERHIHVGDGLEILIVTKDGVRKEFYELKRD 242
>gi|392559294|gb|EIW52479.1| proteasome subunit [Trametes versicolor FP-101664 SS1]
Length = 252
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 125/209 (59%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q +++PY +NGGT +AIAGAD+ V A DTR S GYSI +R K+ +L D+ V+A +GF
Sbjct: 10 QQRSFNPYTDNGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVFRLTDRAVLAVNGF 69
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 70 AADGNMFVKKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYAQRFFPYYVYNILGGIEEDG 129
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
G VY++D VGSYER + G+ +L+ PFLDNQ+ + Q T L + +
Sbjct: 130 SGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTAAVGQSHPTHLPLPDVLA 189
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDG 212
+V F SATER I + LEI V+ G
Sbjct: 190 IVIDSFTSATERHIEVGDGLEIYVVVAKG 218
>gi|6319430|ref|NP_009512.1| proteasome core particle subunit beta 6 [Saccharomyces cerevisiae
S288c]
gi|130882|sp|P23724.1|PSB6_YEAST RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Multicatalytic endopeptidase complex subunit C5;
AltName: Full=Proteasome component C5; Flags: Precursor
gi|11514003|pdb|1G0U|L Chain L, A Gated Channel Into The Proteasome Core Particle
gi|11514017|pdb|1G0U|Z Chain Z, A Gated Channel Into The Proteasome Core Particle
gi|178847471|pdb|2ZCY|L Chain L, Yeast 20s Proteasome:syringolin A-Complex
gi|178847485|pdb|2ZCY|Z Chain Z, Yeast 20s Proteasome:syringolin A-Complex
gi|178847513|pdb|3BDM|L Chain L, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847527|pdb|3BDM|Z Chain Z, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462947|pdb|3NZJ|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462961|pdb|3NZJ|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462975|pdb|3NZW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462989|pdb|3NZW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463003|pdb|3NZX|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463017|pdb|3NZX|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361183|pdb|3MG6|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361197|pdb|3MG6|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361211|pdb|3MG7|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361225|pdb|3MG7|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361239|pdb|3MG8|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361253|pdb|3MG8|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|403071959|pdb|4B4T|6 Chain 6, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|171468|gb|AAA68908.1| proteasome subunit [Saccharomyces cerevisiae]
gi|218467|dbj|BAA00725.1| proteasome subunit [Saccharomyces cerevisiae]
gi|463267|emb|CAA55053.1| YBL0407 [Saccharomyces cerevisiae]
gi|536057|emb|CAA84861.1| PRE7 [Saccharomyces cerevisiae]
gi|45270814|gb|AAS56788.1| YBL041W [Saccharomyces cerevisiae]
gi|151946352|gb|EDN64574.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|207347858|gb|EDZ73901.1| YBL041Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272740|gb|EEU07713.1| Pre7p [Saccharomyces cerevisiae JAY291]
gi|259144804|emb|CAY77743.1| Pre7p [Saccharomyces cerevisiae EC1118]
gi|285810292|tpg|DAA07077.1| TPA: proteasome core particle subunit beta 6 [Saccharomyces
cerevisiae S288c]
gi|323306044|gb|EGA59778.1| Pre7p [Saccharomyces cerevisiae FostersB]
gi|323338788|gb|EGA80003.1| Pre7p [Saccharomyces cerevisiae Vin13]
gi|323349870|gb|EGA84083.1| Pre7p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356250|gb|EGA88054.1| Pre7p [Saccharomyces cerevisiae VL3]
gi|349576338|dbj|GAA21509.1| K7_Pre7p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365767035|gb|EHN08523.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392301173|gb|EIW12262.1| Pre7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 241
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 131/221 (59%), Gaps = 5/221 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR T YSI SR K+ D VM+++GF AD
Sbjct: 21 FNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADG 80
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL K Y HN K++S + + + + LY KRFFPYY ++ GLD +GKG
Sbjct: 81 DALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGA 140
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSEAEAV 182
VY++D VGSYER + G+ ++LIMPFLDNQ+ + V LS E +
Sbjct: 141 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVI 200
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LV+ F SATER I + LEI+++ KDG+ +E+ EL++D
Sbjct: 201 KLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241
>gi|3114281|pdb|1RYP|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114295|pdb|1RYP|1 Chain 1, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513424|pdb|1G65|L Chain L, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513438|pdb|1G65|Z Chain Z, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|14488817|pdb|1FNT|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488831|pdb|1FNT|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150388|pdb|1JD2|L Chain L, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150395|pdb|1JD2|S Chain S, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765711|pdb|1Z7Q|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765725|pdb|1Z7Q|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279379|pdb|2F16|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279393|pdb|2F16|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032213|pdb|2FAK|L Chain L, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032227|pdb|2FAK|Z Chain Z, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490854|pdb|2GPL|L Chain L, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490868|pdb|2GPL|Z Chain Z, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016378|pdb|3D29|L Chain L, Proteasome Inhibition By Fellutamide B
gi|190016392|pdb|3D29|Z Chain Z, Proteasome Inhibition By Fellutamide B
gi|197725332|pdb|3E47|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725346|pdb|3E47|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939223|pdb|3DY3|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939237|pdb|3DY3|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939251|pdb|3DY4|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939265|pdb|3DY4|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828248|pdb|3GPJ|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828262|pdb|3GPJ|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588332|pdb|3GPT|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588346|pdb|3GPT|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588360|pdb|3GPW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588374|pdb|3GPW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588554|pdb|3HYE|L Chain L, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588568|pdb|3HYE|Z Chain Z, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508234|pdb|1VSY|M Chain M, Proteasome Activator Complex
gi|298508248|pdb|1VSY|1 Chain 1, Proteasome Activator Complex
gi|298508450|pdb|3L5Q|Q Chain Q, Proteasome Activator Complex
gi|298508464|pdb|3L5Q|3 Chain 3, Proteasome Activator Complex
gi|330689392|pdb|3MG4|L Chain L, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689406|pdb|3MG4|Z Chain Z, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361155|pdb|3MG0|L Chain L, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361169|pdb|3MG0|Z Chain Z, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892352|pdb|3OKJ|L Chain L, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892366|pdb|3OKJ|Z Chain Z, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780430|pdb|3OEU|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780444|pdb|3OEU|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780458|pdb|3OEV|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780472|pdb|3OEV|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610683|pdb|3TDD|L Chain L, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610697|pdb|3TDD|Z Chain Z, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545857|pdb|3SHJ|L Chain L, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545871|pdb|3SHJ|Z Chain Z, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792252|pdb|3UN4|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792266|pdb|3UN4|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792286|pdb|3UN8|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792300|pdb|3UN8|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980827|pdb|3SDI|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980841|pdb|3SDI|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980855|pdb|3SDK|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980869|pdb|3SDK|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550743|pdb|4GK7|L Chain L, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550757|pdb|4GK7|Z Chain Z, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072203|pdb|4G4S|M Chain M, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973871|pdb|4FZC|L Chain L, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973885|pdb|4FZC|Z Chain Z, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973899|pdb|4FZG|L Chain L, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973913|pdb|4FZG|Z Chain Z, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302350|pdb|4INR|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302364|pdb|4INR|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302378|pdb|4INT|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302392|pdb|4INT|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302406|pdb|4INU|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302420|pdb|4INU|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 222
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 131/221 (59%), Gaps = 5/221 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR T YSI SR K+ D VM+++GF AD
Sbjct: 2 FNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADG 61
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL K Y HN K++S + + + + LY KRFFPYY ++ GLD +GKG
Sbjct: 62 DALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGA 121
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSEAEAV 182
VY++D VGSYER + G+ ++LIMPFLDNQ+ + V LS E +
Sbjct: 122 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVI 181
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LV+ F SATER I + LEI+++ KDG+ +E+ EL++D
Sbjct: 182 KLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 222
>gi|401838704|gb|EJT42186.1| PRE7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 241
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 131/222 (59%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR T YSI SR K+ D VM+++GF AD
Sbjct: 21 FNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNLVMSANGFAADG 80
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL K Y HN K++S + + + + LY KRFFPYY ++ GLD GKG
Sbjct: 81 DALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDENGKGA 140
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEA 181
VY++D VGSYER + G+ ++LIMPFLDNQ+ + P D LS E
Sbjct: 141 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTDGKVKKPLKYLSVEEV 199
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SATER I + LEI+++ KDG+ +E+ EL++D
Sbjct: 200 IKLVRDSFTSATERHIQVGDGLEILIVTKDGVKKEFYELKRD 241
>gi|303313738|ref|XP_003066878.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106545|gb|EER24733.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320032575|gb|EFW14527.1| proteasome component C5 [Coccidioides posadasii str. Silveira]
Length = 259
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 140/235 (59%), Gaps = 15/235 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL-ADKC----- 56
KQH + PY +NGG+ + I G D+ + A DTR +GY+I +R KI K+ AD+
Sbjct: 26 KQH-GFYPYTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGH 84
Query: 57 -VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV 115
+++ GF AD +AL++ L A +Y++ H K+MS A Q LS LY KRFFPYY +
Sbjct: 85 IILSVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAI 144
Query: 116 LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA------ 169
LGGLD +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ + + A
Sbjct: 145 LGGLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEHGGEL 204
Query: 170 -QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
Q PLS A A++LV+ F SA ER I + L+ +++ DGI L++D
Sbjct: 205 VQRTPEPLSRATALELVRDAFTSAVERHIEVGDGLQTMIITADGIEEVITPLKQD 259
>gi|426195798|gb|EKV45727.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 256
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q ++PY NGGT +AIAGAD+ V A DTR S GYSI +R K+ +L DK V+A +GF
Sbjct: 13 QQHQFNPYTENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGF 72
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 73 AADGNMFVKKVRQRLEWYRHAHAKDMPIRAIARLIQTMLYSRRFFPYYVYNILGGIEEDG 132
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
G VY++D VGSYER + G+ +L+ PFLDNQ+ + P LS + +
Sbjct: 133 TGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAPGTSFPGHLSLSTVLS 192
Query: 184 LVKTCFASATERDIYTANKLEI-VVLNKD 211
LV F SATER I + LE+ +VL K+
Sbjct: 193 LVIDSFTSATERHIEVGDGLEMYIVLAKN 221
>gi|409078890|gb|EKM79252.1| hypothetical protein AGABI1DRAFT_113835 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 256
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 1/209 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q ++PY NGGT +AIAGAD+ V A DTR S GYSI +R K+ +L DK V+A +GF
Sbjct: 13 QQHQFNPYTENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGF 72
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 73 AADGNMFVKKVRQRLEWYRHAHAKDMPIRAIARLIQTMLYSRRFFPYYVYNILGGIEEDG 132
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
G VY++D VGSYER + G+ +L+ PFLDNQ+ + P LS + +
Sbjct: 133 TGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAPGTSFPGHLSLSTVLS 192
Query: 184 LVKTCFASATERDIYTANKLEI-VVLNKD 211
LV F SATER I + LE+ +VL K+
Sbjct: 193 LVIDSFTSATERHIEVGDGLEMYIVLAKN 221
>gi|169601780|ref|XP_001794312.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
gi|111067849|gb|EAT88969.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
Length = 264
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 140/237 (59%), Gaps = 18/237 (7%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
+QH + PY +NGG+ + I+GAD+ + A DTR ++GY+I +R K+ K+
Sbjct: 30 RQH-GFYPYTDNGGSTLGISGADFAILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+ V++ GF AD AL++ L +Y++QH K MS A Q LS+ LY KRFFPYY
Sbjct: 89 RIVLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVAACAQRLSHILYNKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA----- 169
+LGGLD G G +Y+YD VGSYER + G+ ++LIMPFLDNQ+ + + P
Sbjct: 149 ILGGLDENGTGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKN-MYEPGSGTGH 207
Query: 170 ---QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
Q + PLS+ DLV+ F SA ER I + L+++++ K+GI + L+KD
Sbjct: 208 DLKQKKIEPLSQDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKEGIAETFTPLKKD 264
>gi|392866253|gb|EAS28865.2| proteasome component C5 [Coccidioides immitis RS]
Length = 260
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 142/235 (60%), Gaps = 15/235 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL-ADKC----- 56
KQH + PY +NGG+ + I G D+ + A DTR +GY+I +R KI K+ AD+
Sbjct: 27 KQH-GFYPYTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGH 85
Query: 57 -VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV 115
+++ GF AD +AL++ L A +Y++ H K+MS A Q LS LY KRFFPYY +
Sbjct: 86 IILSVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAI 145
Query: 116 LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA--- 172
LGGLD +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ + + A+
Sbjct: 146 LGGLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEHGGEL 205
Query: 173 --VT--PLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
VT PLS A A++LV+ F SA ER I + L+ +++ DGI L++D
Sbjct: 206 VQVTPEPLSRATALELVRDAFTSAVERHIEVGDGLQTMIITADGIEEVITPLKQD 260
>gi|46108556|ref|XP_381336.1| hypothetical protein FG01160.1 [Gibberella zeae PH-1]
Length = 264
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 136/231 (58%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC--------VMA 59
++PY +NGG+ +AIAGAD+ + A DTR ++GYSI SR K+ ++ V++
Sbjct: 34 FNPYTDNGGSTLAIAGADFTIMAGDTRHTSGYSINSRMSPKVFRIGGTTASQEDATLVLS 93
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL+ L IY+++H K MS A + LS LY KRFFPYYS +LGGL
Sbjct: 94 VVGFAADGEALRDHLDTICKIYRYRHGKPMSVNACAKRLSTVLYGKRFFPYYSHAMLGGL 153
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA------- 172
D EG+G VY+YD VGSYER + G+ +LIMPFLDNQ+ + + + +
Sbjct: 154 DEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHELKERE 213
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ E +VK F A ER I + L+++++ DGI ++ L+KD
Sbjct: 214 RRPLTRTEVETVVKDAFDGAVERHIEVGDNLQMLIITADGIEETFLPLKKD 264
>gi|189193569|ref|XP_001933123.1| proteasome subunit beta type-1 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187978687|gb|EDU45313.1| proteasome subunit beta type-1 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 264
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 141/237 (59%), Gaps = 18/237 (7%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
+QH + PY +NGG+ + I+GAD+ + A DTR ++GY+I +R K+ K+
Sbjct: 30 RQH-GFYPYTDNGGSTLGISGADFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+ V++ GF AD AL++ L +Y++QH K MS A Q LS+ LY KRFFPYY
Sbjct: 89 RIVLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK--------SPSPLL 166
+LGGLD EGKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ S +
Sbjct: 149 ILGGLDEEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNMYEPGSGTGHE 208
Query: 167 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L ++ A PL DLV+ F SA ER I + L+++++ KDGI + L++D
Sbjct: 209 LKSKQA-QPLPRDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKDGIAETFTPLKRD 264
>gi|119185113|ref|XP_001243373.1| hypothetical protein CIMG_07269 [Coccidioides immitis RS]
Length = 259
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 142/235 (60%), Gaps = 15/235 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL-ADKC----- 56
KQH + PY +NGG+ + I G D+ + A DTR +GY+I +R KI K+ AD+
Sbjct: 26 KQH-GFYPYTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGH 84
Query: 57 -VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV 115
+++ GF AD +AL++ L A +Y++ H K+MS A Q LS LY KRFFPYY +
Sbjct: 85 IILSVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAI 144
Query: 116 LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA--- 172
LGGLD +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ + + A+
Sbjct: 145 LGGLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEHGGEL 204
Query: 173 --VT--PLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
VT PLS A A++LV+ F SA ER I + L+ +++ DGI L++D
Sbjct: 205 VQVTPEPLSRATALELVRDAFTSAVERHIEVGDGLQTMIITADGIEEVITPLKQD 259
>gi|340054849|emb|CCC49156.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
gi|340054851|emb|CCC49158.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
Length = 258
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 132/222 (59%), Gaps = 6/222 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSR-DYSKIIKLADKCVMASSG 62
P WSPY +NGGT A+AG DY + DTR++ + I SR D SK+ +L D +AS+G
Sbjct: 41 HQPMWSPYKDNGGTVAAVAGKDYVILGGDTRLNGDFCIHSRNDRSKLFQLTDHVFLASTG 100
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
QAD LQ++L R YQ+ + ++ S A+ +L S LY +RFFPYY+FN++ GLD
Sbjct: 101 MQADRLQLQQMLKYRIQWYQYNNGGEVPSTRAIAKLTSTILYQRRFFPYYTFNMIVGLDE 160
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181
+G G Y+YD VGS E Y + GS S+ I P +D L + Q A L EA
Sbjct: 161 KGAGVCYSYDPVGSTEPFRYGTSGSASSFIEPLMDCLLTRQHMV----QQAPAELGMNEA 216
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++++K+ F A ERDI+T + + ++ +G+ E+ ELRKD
Sbjct: 217 LEMLKSAFTGAAERDIFTGDSVCFHIITTEGVRTEFFELRKD 258
>gi|408398080|gb|EKJ77215.1| hypothetical protein FPSE_02589 [Fusarium pseudograminearum CS3096]
Length = 264
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 136/231 (58%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC--------VMA 59
++PY +NGG+ +AIAGAD+ + A DTR ++GYSI SR K+ ++ V++
Sbjct: 34 FNPYTDNGGSTLAIAGADFTIMAGDTRHTSGYSINSRMSPKVFRIGGTTASQEDATLVLS 93
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL+ L IY+++H K MS A + LS LY KRFFPYYS +LGGL
Sbjct: 94 VVGFAADGEALRDHLDTICKIYRYRHGKPMSVNACAKRLSTVLYGKRFFPYYSHAMLGGL 153
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA------- 172
D EG+G VY+YD VGSYER + G+ +LIMPFLDNQ+ + + + +
Sbjct: 154 DEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHELKERE 213
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ E +VK F A ER I + L+++++ DGI ++ L+KD
Sbjct: 214 RRPLTRTEVETVVKDAFDGAVERHIEVGDNLQMLIITADGIEETFLPLKKD 264
>gi|84996531|ref|XP_952987.1| proteasome subunit [Theileria annulata strain Ankara]
gi|65303983|emb|CAI76362.1| proteasome subunit, putative [Theileria annulata]
Length = 199
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 128/201 (63%), Gaps = 5/201 (2%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
M + ++PY NNGGT +A +Y V AADTR+S Y I +R +K+ KL DKC++ +
Sbjct: 1 MNRPEERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGT 60
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
SG QAD+ ALQ +L + +Y+ HN++ + A+ QLLS LY +RFFPYY+FN+L G+D
Sbjct: 61 SGMQADMLALQSVLERQIELYRFTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGID 120
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+GKG V YDAVG+Y Y++QG+ S+L++ LDN L + + P +++ L
Sbjct: 121 EQGKGVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDL---- 176
Query: 181 AVDLVKTCFASATERDIYTAN 201
V+LVK SA ERDI T N
Sbjct: 177 -VNLVKNAMVSAVERDICTGN 196
>gi|444321340|ref|XP_004181326.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
gi|387514370|emb|CCH61807.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
Length = 241
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 136/225 (60%), Gaps = 6/225 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH ++PY +NGGT + IAG D+ V A DTR T YSI SR K+ D V++++GF
Sbjct: 18 QH-QFNPYSDNGGTILGIAGEDFAVLAGDTRNITDYSINSRFEPKVFDCGDNIVISANGF 76
Query: 64 QADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
AD +AL + Y HN K+++ + + + + LY KRFFPYY ++ GLD E
Sbjct: 77 AADGEALVQRFKNSIKWYHFDHNDKKLTMKSAARNIQHLLYGKRFFPYYVHTIIAGLDEE 136
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSE 178
GKG VY++D VGSYER + G+ ++LIMPFLDNQ+ + + + V L+
Sbjct: 137 GKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPESNGKVKRPLKYLTI 196
Query: 179 AEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
E + LV+ F SATER I + LEI+++ KDG+ +EY +L++D
Sbjct: 197 DECIKLVRDAFTSATERHIQVGDGLEILIVTKDGVRKEYFDLKRD 241
>gi|401415060|ref|XP_003872026.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488248|emb|CBZ23493.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 247
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 133/218 (61%), Gaps = 6/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSR-DYSKIIKLADKCVMASSGFQAD 66
WSPY +NGGT AIAG + + A DTR++ Y + R D SKI +L MAS+G QAD
Sbjct: 34 WSPYQDNGGTTAAIAGKGFVILAGDTRLNGDYCLHCRHDQSKIFQLTPYTYMASNGMQAD 93
Query: 67 VKALQKLLAARHLIYQHQHNKQMS-CPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
LQ++L R YQ+ + ++ A+ QL+S LY++RFFPYY+FN++ GLD EG G
Sbjct: 94 RVQLQQMLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMIVGLDEEGNG 153
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
Y+YDAVGS E Y ++GS ++ + P LD + + AQ A +++ E + ++
Sbjct: 154 VCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQH---MTAQ-APPEMTKEETLAML 209
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F A ERDIYT + + ++ KDG+ RE ELRKD
Sbjct: 210 KNAFTGAAERDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|342879609|gb|EGU80854.1| hypothetical protein FOXB_08721 [Fusarium oxysporum Fo5176]
Length = 264
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 136/231 (58%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC--------VMA 59
++PY +NGG+ +AIAGAD+ + A DTR ++GYSI SR K+ ++ V++
Sbjct: 34 FNPYTDNGGSTLAIAGADFTIMAGDTRHTSGYSINSRMSPKVFRIGGTTASQEDATLVLS 93
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL+ L IY+++H K M+ A + LS LY KRFFPYYS +LGGL
Sbjct: 94 VVGFAADGEALRDHLDTICKIYRYRHGKPMTVNACAKRLSTVLYSKRFFPYYSHAMLGGL 153
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA------- 172
D EG+G VY+YD VGSYER + G+ +LIMPFLDNQ+ + + + +
Sbjct: 154 DEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHELKERE 213
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ E +VK F A ER I + L+++++ DGI ++ L+KD
Sbjct: 214 RRPLTRTEVETVVKDAFDGAVERHIEVGDNLQMLIITADGIEETFLPLKKD 264
>gi|354547791|emb|CCE44526.1| hypothetical protein CPAR2_403290 [Candida parapsilosis]
Length = 244
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 131/222 (59%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI SR KI + D +M ++GF AD
Sbjct: 24 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPKIHNVGDNILMTANGFAADG 83
Query: 68 KALQKLLAARHLIYQHQH-NKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL Y+ + N+++ + + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 84 VALLDKFKQAFTWYKFDNGNRKLEISSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGA 143
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P D + LS E
Sbjct: 144 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FVPGTDGKEKKPLKYLSLEEV 202
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SA ER IY + LEI+++ KDG+ EY L++D
Sbjct: 203 IQLVRDAFNSAGERHIYVGDGLEILIVTKDGVRTEYFPLKRD 244
>gi|154278896|ref|XP_001540261.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
gi|150412204|gb|EDN07591.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
Length = 266
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 140/246 (56%), Gaps = 33/246 (13%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLA--DKC---- 56
KQH ++PY +NGG+ + IAG DY + A DTR +GY+I +R K+ K+ D+C
Sbjct: 29 KQHHGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDECGEGA 88
Query: 57 --VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y+++H K MS A Q L+ LY KRFFPYY
Sbjct: 89 HLVLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--------------- 159
+L G+D +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+
Sbjct: 149 ILAGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNA 208
Query: 160 --KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREY 217
K P P P +D A+ LV F SA ER I + L+++V+ ++GI Y
Sbjct: 209 MDKQPRPSEPPPRDV--------ALQLVNDAFTSAVERHIEVGDGLQVMVITREGIQEIY 260
Query: 218 MELRKD 223
L+KD
Sbjct: 261 HPLKKD 266
>gi|398395515|ref|XP_003851216.1| proteasome core particle subunit beta 6 [Zymoseptoria tritici
IPO323]
gi|339471095|gb|EGP86192.1| hypothetical protein MYCGRDRAFT_105119 [Zymoseptoria tritici
IPO323]
Length = 264
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 143/239 (59%), Gaps = 22/239 (9%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
KQH + PY +NGG+ + I+G+D+ + A DTR ++GY+I +R K+ K+
Sbjct: 30 KQH-GFYPYTDNGGSTLGISGSDFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPDQTGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+ V++ GF AD AL++ L +Y++QH K M A Q LS+ LY KRFFP+Y
Sbjct: 89 RIVLSVVGFAADGHALKERLDTVVKMYKYQHGKDMPVHACAQRLSHILYGKRFFPFYVTA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ--LKSPSPLLLPAQD- 171
+LGG+D+EGKG +Y+YD VGSYER + G+ ++LIMPFLDNQ LK+ + PAQ
Sbjct: 149 ILGGIDDEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNLKNQTD---PAQPQ 205
Query: 172 -------AVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS +LV+ F SA ER I + L+++V+ K+G+ Y EL+KD
Sbjct: 206 GLEKVGLVPKPLSREHVEELVRDAFTSAVERHIEVGDGLQLMVITKEGVVETYSELKKD 264
>gi|451998685|gb|EMD91149.1| hypothetical protein COCHEDRAFT_90180 [Cochliobolus heterostrophus
C5]
Length = 264
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 138/237 (58%), Gaps = 18/237 (7%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
+QH + PY +NGG+ + I+GAD+ + A DTR ++GY+I +R K+ K+
Sbjct: 30 RQH-GFYPYTDNGGSTLGISGADFAILAGDTRSTSGYNINTRYAPKLFKIGGEGSDNKGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+ V++ GF AD AL++ L +Y++QH K M+ A Q LS+ LY KRFFPYY
Sbjct: 89 RIVLSVVGFAADAHALKERLDTIVKMYKYQHGKPMTVSACAQRLSHILYNKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+LGGLD +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ + + P
Sbjct: 149 ILGGLDEDGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKN-MYEPGSGVGH 207
Query: 173 ------VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL DLV+ F SA ER I + L+++++ KDGI Y L++D
Sbjct: 208 ELKSKQAEPLPRDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKDGIAETYTPLKRD 264
>gi|126274560|ref|XP_001387579.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213449|gb|EAZ63556.1| proteasome subunit [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI SR K+ + D VM ++GF AD
Sbjct: 22 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYQPKVFNVGDDIVMTANGFAADG 81
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL + Y+ H K+++ + + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 82 AALIDRFKNQLQWYKFDHGGKKLNIKSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGA 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + P D + L+ E
Sbjct: 142 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGSDGKKKRELRYLTLDEV 200
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++LV+ F+SATER I + LEI+++ K+G+ EY +L++D
Sbjct: 201 LELVRDAFSSATERHIQVGDGLEILIVTKEGVRTEYFDLKRD 242
>gi|403412828|emb|CCL99528.1| predicted protein [Fibroporia radiculosa]
Length = 252
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 4/211 (1%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q ++PY NGGT +AIAGAD+ V A DTR S GYSI +R K+ +L ++ V+A +GF
Sbjct: 10 QQRQFNPYTENGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVFRLTERAVLAVNGF 69
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H K+M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 70 AADGNMFVKKVKQRLEWYRHAHAKEMPLRAIARLIQTMLYAQRFFPYYVYNILGGIEEDG 129
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--KSPSPLLLPAQDAVTPLSEAEA 181
G VY++D VGSYER + G+ +L+ PFLDNQ+ K+ +P + PL+ +
Sbjct: 130 SGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAAGSSHPTHLPLN--DV 187
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDG 212
+ +V F SATER I + LEI V+ G
Sbjct: 188 LSIVIDSFTSATERHIEVGDGLEIYVVLAKG 218
>gi|395325433|gb|EJF57855.1| proteasome subunit [Dichomitus squalens LYAD-421 SS1]
Length = 252
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 132/222 (59%), Gaps = 4/222 (1%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q ++PY +NGGT +AIAGAD+ V A DTR S GYSI +R K+ +L D+ V+A +GF
Sbjct: 10 QQRQFNPYTDNGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVFRLTDRAVLAVNGF 69
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 70 AADGNMFVKKVKQRLEWYRHAHAKDMPLHAIARLIQTMLYAQRFFPYYVYNILGGIEEDG 129
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--KSPSPLLLPAQDAVTPLSEAEA 181
G VY++D VGSYER + G+ +L+ PFLDNQ+ K+ + A PLS+ A
Sbjct: 130 SGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQKAAAGQSHPAHLPLSDVLA 189
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ V F SATER I + LEI V+ G + +E ++
Sbjct: 190 I--VIDSFTSATERHIEVGDGLEIYVVVAKGRSPQGLETMRN 229
>gi|401626713|gb|EJS44638.1| pre7p [Saccharomyces arboricola H-6]
Length = 241
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 131/222 (59%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR T YSI SR K+ D VM+++GF AD
Sbjct: 21 FNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADG 80
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL K Y HN K++S + + + + LY KRFFPYY ++ GLD GKG
Sbjct: 81 DALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDENGKGA 140
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEA 181
VY++D VGSYER + G+ ++LIMPFLDNQ+ + P D LS E
Sbjct: 141 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTDGKVKKPLKYLSVEEV 199
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SATER I + LEI+++ K+G+ +E+ EL++D
Sbjct: 200 IKLVRDSFTSATERHIQVGDGLEILIVTKEGVRKEFYELKRD 241
>gi|254586379|ref|XP_002498757.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
gi|238941651|emb|CAR29824.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
Length = 244
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 133/219 (60%), Gaps = 5/219 (2%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
PY +NGGT + IAG D+ V A DTR +T YSI SR SK+ D V+ ++G+ AD +A
Sbjct: 26 PYTDNGGTVLGIAGEDFAVLAGDTRHTTDYSINSRYESKVFDCGDNIVITANGYAADGEA 85
Query: 70 LQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L K Y HN K++S + + + + LY KRFFPYY ++ GLD EGKG VY
Sbjct: 86 LVKRFKNSVKWYHFDHNDKKLSLNSAARNIQHLLYGKRFFPYYVQTIIAGLDEEGKGAVY 145
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSEAEAVDL 184
++D VGSYER + G+ ++LIMPFLDNQ+ + + + V LS E + L
Sbjct: 146 SFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFHNQYVPESNGRVKRPLKFLSVDEVIRL 205
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
V+ F SATER I + LEI+++ KDG+ +++ EL++D
Sbjct: 206 VRDAFTSATERHIQVGDGLEILIVTKDGVTKQFYELKRD 244
>gi|453081972|gb|EMF10020.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 255
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 138/242 (57%), Gaps = 28/242 (11%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLA--------D 54
KQH + PY +NGG+ + I+G+D+ + A DTR ++GY+I +R K+ K+
Sbjct: 21 KQH-GFYPYTDNGGSTLGISGSDFTILAGDTRSTSGYNINTRYEPKLFKIGGNGPENEGS 79
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
K V++ GF AD AL++ L +Y++QH K +S A Q LS+ LY KRFFPYY
Sbjct: 80 KIVLSVVGFAADGHALKERLDTVVKMYKYQHGKDISIGACAQRLSHILYGKRFFPYYVTA 139
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-------------S 161
+LGG+D +GKG +Y+YD VGSYER + G+ S+LIMPFLDNQ+ S
Sbjct: 140 ILGGIDEDGKGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNLKNQYDPTQPQGFS 199
Query: 162 PSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELR 221
PL+ PL LVK F SA ER I + L+ +++ KDGI Y +L+
Sbjct: 200 KEPLV------AKPLDRQHVESLVKDAFTSAVERHIEVGDGLQTMIITKDGILETYADLK 253
Query: 222 KD 223
KD
Sbjct: 254 KD 255
>gi|358388877|gb|EHK26470.1| hypothetical protein TRIVIDRAFT_36186 [Trichoderma virens Gv29-8]
Length = 264
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 137/231 (59%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC--------VMA 59
++PY +NGG+ +AI+GAD+ + A DTR ++GYSI SR K+ K+ V++
Sbjct: 34 FNPYSDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGTTATQEDATIVLS 93
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL+ L IY+++H K M+ A + LS LY KRFFPYY+ +LGGL
Sbjct: 94 VCGFAADGEALRDRLDTVCKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYTHAMLGGL 153
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT----- 174
D EGKG VY+YD VGSYER + G+ +LIMPFLDNQ+ + + + +
Sbjct: 154 DEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHALKERE 213
Query: 175 --PLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ + LVK F A ER I + L+++++ K+GI ++ L+KD
Sbjct: 214 RHPLTRPQVETLVKDAFDGAVERHIEVGDSLQMLIITKEGIEEVFLPLKKD 264
>gi|344305208|gb|EGW35440.1| proteasome component C5 [Spathaspora passalidarum NRRL Y-27907]
Length = 242
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 132/222 (59%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI SR KI + D VM ++GF AD
Sbjct: 22 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPKIFDVGDNIVMTANGFAADG 81
Query: 68 KALQKLLAARHLIYQHQH-NKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL + Y+ + ++ + + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 82 VALIDKFRQQLKWYKFDNFGGKLEIKSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGA 141
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P D + L+ E
Sbjct: 142 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FIPGTDGKEKKPLKYLTLEEV 200
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++LV+ F+SATER IY + LEI ++ KDG+ EY L++D
Sbjct: 201 IELVRDAFSSATERHIYVGDGLEIKIVTKDGVRTEYYPLKRD 242
>gi|302412397|ref|XP_003004031.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
gi|261356607|gb|EEY19035.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
Length = 264
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLA-------DKCVMAS 60
++PY +NGG+ +AIAGAD+ + A DTR ++GYSI SR K+ K+ D ++ S
Sbjct: 34 FNPYTDNGGSTLAIAGADFAIVAGDTRSTSGYSINSRYSPKVYKIGGTTSNQDDATILLS 93
Query: 61 S-GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL++ L A IY+H+H K MS A + LS LY KRFFPYY + +LGGL
Sbjct: 94 VVGFAADGEALKERLDAICKIYRHRHGKAMSVTACAKRLSTILYQKRFFPYYVYAILGGL 153
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA-------QDA 172
D +G G V++YD VGSYER + G+ ++LI PFLDNQ+ + + + +
Sbjct: 154 DEKGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVPGSGVGHELKERE 213
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
V PL EA LVK F A ER I + L+++V+ GI + L+KD
Sbjct: 214 VVPLERKEAEILVKDAFDGAVERHIEVGDALQMMVITSKGIEEILLPLKKD 264
>gi|365762155|gb|EHN03761.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 241
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 131/222 (59%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR T YSI SR K+ D V++++GF AD
Sbjct: 21 FNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNLVVSANGFAADG 80
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL K Y HN K++S + + + + LY KRFFPYY ++ GLD GKG
Sbjct: 81 DALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDENGKGA 140
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEA 181
VY++D VGSYER + G+ ++LIMPFLDNQ+ + P D LS E
Sbjct: 141 VYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTDGKVKKPLKYLSVEEV 199
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SATER I + LEI+++ KDG+ +E+ EL++D
Sbjct: 200 IKLVRDSFTSATERHIQVGDGLEILIVTKDGVKKEFYELKRD 241
>gi|330914581|ref|XP_003296697.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
gi|311331038|gb|EFQ95204.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
Length = 264
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 141/237 (59%), Gaps = 18/237 (7%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
+QH + PY +NGG+ + I+GAD+ + A DTR ++GY+I +R K+ K+
Sbjct: 30 RQH-GFYPYTDNGGSTLGISGADFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+ V++ GF AD AL++ L +Y++QH K MS A Q LS+ LY KRFFPYY
Sbjct: 89 RIVLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK--------SPSPLL 166
+LGGLD EGKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ S +
Sbjct: 149 ILGGLDEEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNMYEPGSGTGHE 208
Query: 167 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L ++ A PL DLV+ F SA ER I + L+++++ K+GI + L++D
Sbjct: 209 LKSKQA-QPLPRDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKEGIAETFTPLKRD 264
>gi|407921854|gb|EKG14992.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 266
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 140/237 (59%), Gaps = 16/237 (6%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADK------ 55
+QH A++PY +NGG+ + I+G D+ + A DTR ++GY+I +R K+ K+ +
Sbjct: 31 VRQH-AFNPYTDNGGSTLGISGKDFTIIAGDTRSTSGYNINTRYQPKLFKIGGEGPDNEG 89
Query: 56 --CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
V++ GF AD AL++ L +Y++QH K MS A Q LS+ LY KRFFPYY
Sbjct: 90 ATIVLSVVGFAADGAALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYGKRFFPYYVH 149
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA---- 169
+LGGLD EG+G +Y+YD VGSYER + G+ ++LIMPFLDNQ+ + + +
Sbjct: 150 AILGGLDEEGRGALYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYIPGSGVGH 209
Query: 170 ---QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ PL LV F+SA ER I + L+++++ +DGI Y EL+KD
Sbjct: 210 ALEERPRDPLPRDHVEALVHDAFSSAVERHIEVGDGLQMMIITRDGIQEVYKELKKD 266
>gi|46397057|sp|Q9U794.1|PSB1_TRYBB RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome subunit beta-6
gi|6224687|gb|AAF05905.1|AF148124_1 20S proteasome beta 6 subunit [Trypanosoma brucei brucei]
gi|261329654|emb|CBH12636.1| 20S proteasome beta 6 subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 258
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 136/228 (59%), Gaps = 15/228 (6%)
Query: 3 KQHPA-WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSR-DYSKIIKLADKCVMAS 60
K HP WSPY +NGGT AIAG++Y V ADTR++ + I +R D SK+ KL D+ +AS
Sbjct: 39 KGHPQHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLAS 98
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
SG QAD LQ++L R YQ+ + ++ S A+ +L S LY +RFFPYY+FN++ G+
Sbjct: 99 SGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGI 158
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP---- 175
D +G G Y+YD VGS E Y + GS S+ + P LD LL Q VT
Sbjct: 159 DEKGAGVCYSYDPVGSTEPFRYGTCGSASSFVEPLLD--------CLLTRQHMVTQAPAD 210
Query: 176 LSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L+ EA+ ++K F A ERDI+T + + ++ DG+ E ELRKD
Sbjct: 211 LTMEEALGMLKNAFTGAAERDIFTGDTVCFHIITADGVGTEMFELRKD 258
>gi|448530387|ref|XP_003870050.1| Pre7 protein [Candida orthopsilosis Co 90-125]
gi|380354404|emb|CCG23919.1| Pre7 protein [Candida orthopsilosis]
Length = 286
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 131/222 (59%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI SR KI + D +M ++GF AD
Sbjct: 66 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPKIHNVGDNILMTANGFAADG 125
Query: 68 KALQKLLAARHLIYQHQH-NKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL Y+ + N+++ + + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 126 VALIDKFKQSFTWYKFDNGNRKLEISSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGA 185
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P D + LS E
Sbjct: 186 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FVPGTDGKEKKPLKYLSLEEV 244
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SA ER IY + LEI+++ KDG+ EY L++D
Sbjct: 245 IQLVRDAFNSAGERHIYVGDGLEILIVTKDGVRTEYYPLKRD 286
>gi|367001675|ref|XP_003685572.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
gi|357523871|emb|CCE63138.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
Length = 241
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 135/221 (61%), Gaps = 5/221 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR +T YSI SR K+ D +++++GF AD
Sbjct: 21 FNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDDIIISANGFAADG 80
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
+AL K Y +N K+++ + + + + LY KRFFPYY ++ GLD EGKG
Sbjct: 81 EALVKRFKNSIKWYHFDNNDKKLALSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGA 140
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSEAEAV 182
VY++D VGSYER + G+ ++LIMPFLDNQ+ + + V LS E +
Sbjct: 141 VYSFDPVGSYEREFCRAGGAAASLIMPFLDNQVNFKNQYTPDSNGKVKRPFKHLSIDEVI 200
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LV+ F SATER I+ + LEI+++ K+G+ +E+ EL++D
Sbjct: 201 KLVRDAFTSATERHIHVGDGLEILIVTKEGVRKEFYELKRD 241
>gi|241954356|ref|XP_002419899.1| proteasome component, putative [Candida dubliniensis CD36]
gi|223643240|emb|CAX42114.1| proteasome component, putative [Candida dubliniensis CD36]
Length = 245
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 131/222 (59%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI SR SKI + D +M ++GF AD
Sbjct: 25 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILMTANGFAADG 84
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL + Y+ +N K+++ + + + LY KR FPYY ++ GLD EGKG
Sbjct: 85 IALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRLFPYYVSTLIAGLDEEGKGA 144
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P D + L+ E
Sbjct: 145 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FVPGTDGKEKKPLKYLTLEEV 203
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SA ER IY + LEI ++ KDGI EY L++D
Sbjct: 204 IQLVRDAFTSAGERHIYVGDGLEIKIVTKDGIRTEYYPLKRD 245
>gi|255720859|ref|XP_002545364.1| proteasome component C5 [Candida tropicalis MYA-3404]
gi|240135853|gb|EER35406.1| proteasome component C5 [Candida tropicalis MYA-3404]
Length = 245
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 132/222 (59%), Gaps = 7/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR TGYSI SR K+ + D +M ++GF AD
Sbjct: 25 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVTGYSIQSRYEPKVHDVGDDILMTANGFAADG 84
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL + Y+ + K+++ + + + + LY KRFFP+Y ++ GLD EGKG
Sbjct: 85 VALIDRFKQSLIWYKFDNGGKKLTIKSAARYIQHLLYGKRFFPFYVSTLIAGLDEEGKGA 144
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P D + LS E
Sbjct: 145 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FVPGTDGKEKKPLKYLSLEEV 203
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SA ER IY + LEI ++ KDGI EY L++D
Sbjct: 204 IQLVRDAFTSAGERHIYVGDGLEIKIVTKDGIRTEYYPLKRD 245
>gi|72391616|ref|XP_846102.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175642|gb|AAX69774.1| proteasome beta 6 subunit [Trypanosoma brucei]
gi|70802638|gb|AAZ12543.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 258
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 136/228 (59%), Gaps = 15/228 (6%)
Query: 3 KQHPA-WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSR-DYSKIIKLADKCVMAS 60
K HP WSPY +NGGT AIAG++Y V ADTR++ + I +R D SK+ KL D+ +AS
Sbjct: 39 KGHPQHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLAS 98
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
SG QAD LQ++L R YQ+ + ++ S A+ +L S LY +RFFPYY+FN++ G+
Sbjct: 99 SGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGI 158
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP---- 175
D +G G Y+YD VGS E Y + GS S+ + P LD LL Q VT
Sbjct: 159 DEKGAGVCYSYDPVGSTEPFRYGTCGSASSFVEPLLD--------CLLTRQHMVTQAPAD 210
Query: 176 LSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L+ EA+ ++K F A ERDI+T + + ++ DG+ E ELRKD
Sbjct: 211 LTMEEALGMLKNAFTGAAERDIFTGDTVCFHIVTADGVGTEMFELRKD 258
>gi|342182103|emb|CCC91582.1| proteasome beta 6 subunit [Trypanosoma congolense IL3000]
Length = 258
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 136/230 (59%), Gaps = 15/230 (6%)
Query: 1 MTKQHPA-WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSR-DYSKIIKLADKCVM 58
+ K HP WSPY +NGGT AIAG D+ + ADTR++ + I +R D SK+ +L D+ +
Sbjct: 37 VAKGHPQMWSPYTDNGGTIAAIAGRDFAILGADTRLNGDFCIHTRMDTSKLFQLTDRVFL 96
Query: 59 ASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLG 117
ASSG QAD LQ++L R Y++ + K S A+ +L+S LY +RFFPYY+FN++
Sbjct: 97 ASSGMQADRLQLQRMLQYRIQWYRYNNGGKTPSTKAIAKLVSTVLYQRRFFPYYTFNMIV 156
Query: 118 GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--- 174
GLD +G G Y+YDAVGS E Y + GS S+ + P +D LL Q VT
Sbjct: 157 GLDEQGAGVCYSYDAVGSTEPSRYGTCGSASSFVEPLMD--------CLLTRQHMVTSVP 208
Query: 175 -PLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LS E + ++K F A ERDI+T + + V+ +GI E ELRKD
Sbjct: 209 PELSVEEVLGMMKDAFTGAAERDIFTGDSVCFHVITAEGIRTEMFELRKD 258
>gi|451848862|gb|EMD62167.1| hypothetical protein COCSADRAFT_38952 [Cochliobolus sativus ND90Pr]
Length = 264
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 141/237 (59%), Gaps = 18/237 (7%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
+QH + PY +NGG+ + I+GAD+ + A DTR ++GY+I +R K+ K+
Sbjct: 30 RQH-GFYPYTDNGGSTLGISGADFAILAGDTRSTSGYNINTRYAPKLFKIGGEGSDSKGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+ V++ GF AD AL++ L +Y++QH K M+ A Q LS+ LY KRFFPYY
Sbjct: 89 RIVLSVVGFAADAHALKERLDTIVKMYKYQHGKPMTVSACAQRLSHILYNKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPLL--- 166
+LGGLD +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ P +
Sbjct: 149 ILGGLDEDGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNMYEPGSGVGHE 208
Query: 167 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L ++ A PL DLV+ F SA ER I + L+++++ K+GI Y L++D
Sbjct: 209 LKSKQA-EPLPRDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKEGIAETYTPLKRD 264
>gi|170089877|ref|XP_001876161.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164649421|gb|EDR13663.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 249
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 1/209 (0%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q +++PY NGGT +AIAGAD+ V A DTR S GYSI +R K+ +L DK V+A +GF
Sbjct: 6 QQHSFNPYTENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGF 65
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H+K M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 66 AADGNMFVKKVRQRLEWYRHAHSKDMPIRAIARLIQTMLYARRFFPYYVYNILGGIEEDG 125
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
G VY++D VGSYER + G+ +L+ PFLDNQ+ + P L +
Sbjct: 126 TGAVYSFDPVGSYEREACRAAGAAQSLMQPFLDNQIYFKNQTPAPGTSFPQHLPLNTVLS 185
Query: 184 LVKTCFASATERDIYTANKLEI-VVLNKD 211
LV F ATER I + LE+ VVL ++
Sbjct: 186 LVIDSFTGATERHIEVGDSLEMYVVLARE 214
>gi|339246829|ref|XP_003375048.1| proteasome subunit beta type-1 [Trichinella spiralis]
gi|316971688|gb|EFV55434.1| proteasome subunit beta type-1 [Trichinella spiralis]
Length = 297
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 129/217 (59%), Gaps = 5/217 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMS-TGYSILSRDYSKIIKLADKCVMASSGFQAD 66
++PY NGGTC IAG D+ + + DTR+S + ++SR K+ +L K M +GFQ D
Sbjct: 85 FNPYTENGGTCAGIAGKDFVILSGDTRLSASSMVVMSRTAPKVYRLTPKVYMTGTGFQGD 144
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
+ L K+L R Y N+ M A QLLS TLY++RFFPYY ++GG+D +G+G
Sbjct: 145 MIQLVKVLRTRIQQYLFTFNEYMDIHAAAQLLSRTLYFRRFFPYYVGAIIGGIDRDGRGV 204
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+Y+YD VG+ E + YS+QG GS LI PF DNQ+ + P Q PLS+ A L+
Sbjct: 205 LYSYDPVGTIEELPYSAQGEGSYLIEPFFDNQIGWKTQ---PEQTK-QPLSKERAQQLMH 260
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F S ER+ T + +++VVL+ D + +++R D
Sbjct: 261 DAFISTIEREKSTGDAVQMVVLHGDRVEEHILKMRTD 297
>gi|169769575|ref|XP_001819257.1| proteasome component C5 [Aspergillus oryzae RIB40]
gi|238488110|ref|XP_002375293.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
gi|83767116|dbj|BAE57255.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700172|gb|EED56511.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
Length = 261
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 135/237 (56%), Gaps = 16/237 (6%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD------- 54
K+H ++ PY +NGG+ + I GAD+ + A DTR GY+I SR K+ K+
Sbjct: 26 NKEH-SFYPYTDNGGSTLGITGADFAILAGDTRSVAGYNINSRYAPKVFKIGGDDDTGEG 84
Query: 55 -KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
+++ GF AD +AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 85 AHIILSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVH 144
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA- 172
+L GLD EGKG +Y+YD VGSYER + GS ++LIMPFLDNQ+ + + + D
Sbjct: 145 AILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPSSGDGH 204
Query: 173 ------VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL LV+ F SA ER I + L+++V+ ++GI Y L+KD
Sbjct: 205 ALEPKKPEPLPRETVEQLVRDAFTSAVERHIEVGDGLQMMVITQNGIEEIYTPLKKD 261
>gi|261201302|ref|XP_002627051.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239592110|gb|EEQ74691.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239611727|gb|EEQ88714.1| proteasome component C5 [Ajellomyces dermatitidis ER-3]
gi|327348257|gb|EGE77114.1| proteasome component C5 [Ajellomyces dermatitidis ATCC 18188]
Length = 266
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 138/246 (56%), Gaps = 33/246 (13%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
KQH ++PY +NGG+ + IAG DY + A DTR +GY+I +R K+ K+ +
Sbjct: 29 KQHHGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEDNEGGEGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y+++H K MS A Q L+ LY KRFFPYY
Sbjct: 89 HLVLSVVGFAADGRALKERLDAIVKMYKYRHGKPMSVKACAQRLATILYSKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--------------- 159
+L G+D EGKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+
Sbjct: 149 ILAGIDEEGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQFIPGSGEGNA 208
Query: 160 --KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREY 217
K P + P +D A+ LVK F SA ER I + L+++V+ +GI +
Sbjct: 209 MDKQPREPVPPPRDV--------ALQLVKDAFTSAVERHIEVGDGLQVMVITTEGIQEVH 260
Query: 218 MELRKD 223
L+KD
Sbjct: 261 HPLKKD 266
>gi|310793289|gb|EFQ28750.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 263
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 139/236 (58%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLA-------DK 55
+QH ++PY +NGG+ +AIAGAD+ + A DTR ++GYSI SR K+ K+ D
Sbjct: 29 RQH-RFNPYTDNGGSTLAIAGADFAIMAGDTRSTSGYSINSRYTPKVFKIGGTTSTQEDA 87
Query: 56 CVMASS-GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
++ S GF AD +AL+ L IY+++H K MS A + LS LY KRFFPYY +
Sbjct: 88 TILLSVVGFAADGEALKDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRFFPYYVYA 147
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA----- 169
+LGGLD EG G V++YD VGSYER + G+ ++LI PFLDNQ+ + + +
Sbjct: 148 ILGGLDEEGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVPGSGVGHE 207
Query: 170 --QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ PL EA LVK F A ER I + L+++V+ K+GI + L+KD
Sbjct: 208 LQERPRVPLERKEAEILVKDAFDGAVERHIEVGDHLQMMVITKNGIEEVLLPLKKD 263
>gi|225680770|gb|EEH19054.1| proteasome subunit beta type-1-A [Paracoccidioides brasiliensis
Pb03]
gi|226292463|gb|EEH47883.1| proteasome component C5 [Paracoccidioides brasiliensis Pb18]
Length = 266
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 139/238 (58%), Gaps = 17/238 (7%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
K+H ++PY +NGG+ + IAG DY + A DTR TGYSI +R K+ K+ +
Sbjct: 29 KRHHGFNPYTDNGGSTLGIAGEDYAILAGDTRSVTGYSINTRYSPKLFKIGEDGEGGEGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y+++H K MS A Q LS LY KRFFPYY
Sbjct: 89 HLVLSVVGFAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILYSKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL-------- 166
+LGG+D +G+G +Y+YD VGSYER + G+ ++LIMPFLDNQ+ + +
Sbjct: 149 ILGGIDEDGRGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYVSGPGEGNA 208
Query: 167 LPAQDAVTPLSEAE-AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L Q AE A+ LV F SA ER I + L+I+++ KDGI Y L+KD
Sbjct: 209 LDKQPRQPQPQPAEDALQLVNDAFTSAVERHIEVGDGLQIMLITKDGIMEMYHPLKKD 266
>gi|123447011|ref|XP_001312251.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121894091|gb|EAX99321.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 224
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
WSPY+ +GGT + I G DY V ADTR+S YSI SR ++I K+ C+++++GF D+
Sbjct: 13 WSPYEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDI 72
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
A + + L Y++QH +MS ++ + +SNTLY KRFFPYY ++GG+++EGKG +
Sbjct: 73 DAFITRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINSEGKGKL 132
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y YD VG+ E + Y S GSGS+L P LD+ + P +S +A ++V+
Sbjct: 133 YGYDPVGTIEDLHYDSNGSGSSLAAPLLDSAFGTIHHNTRP----FPAVSLQDAKNIVRD 188
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRK 222
S TERDIYT + L++ V KDG +E L +
Sbjct: 189 AICSVTERDIYTGDALQLCVFTKDGFAQEEFPLPR 223
>gi|389745045|gb|EIM86227.1| proteasome subunit [Stereum hirsutum FP-91666 SS1]
Length = 258
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q A++PY NGGT +AIAGAD+ V A+DTR + G+SI +R K +L D+ V+A +GF
Sbjct: 16 QQRAFNPYTQNGGTILAIAGADFTVIASDTRQTEGFSIQTRYAPKAFQLTDRAVLAVNGF 75
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 76 AADGNMFVKQVKQRLEWYRHAHAKDMPLRAIARLIQTMLYGRRFFPYYVYNILGGIEEDG 135
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP--LSEAEA 181
G VY++D VGSYER + G+ +L+ PFLDNQ+ + PAQ P L +
Sbjct: 136 TGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQ--TPAQGLSHPTHLPLPDV 193
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDG 212
+D+V F SATER I + LE+ ++ G
Sbjct: 194 LDIVIDSFTSATERHIEVGDGLEMFIVLAKG 224
>gi|238881595|gb|EEQ45233.1| proteasome component C5 [Candida albicans WO-1]
Length = 244
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 132/222 (59%), Gaps = 8/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI SR SKI + D +M ++GF AD
Sbjct: 25 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILMTANGFAADG 84
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL + Y+ +N K+++ + + + LY KRFFPY S ++ GLD EGKG
Sbjct: 85 VALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFPYVS-TLIAGLDEEGKGA 143
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P D + L+ E
Sbjct: 144 VYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQ-FVPGTDGKEKKPLKFLTLEEV 202
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SA ER IY + LEI ++ KDGI EY L++D
Sbjct: 203 IQLVRDAFTSAGERHIYVGDGLEIKIVTKDGIRTEYYPLKRD 244
>gi|396457904|ref|XP_003833565.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
JN3]
gi|312210113|emb|CBX90200.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
JN3]
Length = 264
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 138/237 (58%), Gaps = 18/237 (7%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
+QH + PY +NGG+ + IAG D+ + A DTR ++GY+I +R K+ K+
Sbjct: 30 RQH-GFYPYTDNGGSTLGIAGQDFAILAGDTRSTSGYNINTRYAPKLFKIGGEGSDNKDA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+ V++ GF AD AL++ L +Y++QH K MS A Q LS+ LY KRFFPYY
Sbjct: 89 RIVLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPLL--- 166
+L GLD EGKG +Y+YD VGSYER + G+ S+LIMPFLDNQ+ P +
Sbjct: 149 ILAGLDEEGKGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNFKNMYEPGSGVGHE 208
Query: 167 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L A+ A PL + DLV+ F SA ER I + L+++ + +GI Y L++D
Sbjct: 209 LKAKQA-EPLPQDHVEDLVRDAFTSAVERHIEVGDGLQMMTITSEGIRESYTPLKRD 264
>gi|308159821|gb|EFO62339.1| Proteasome subunit beta type 1 [Giardia lamblia P15]
Length = 214
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 130/216 (60%), Gaps = 9/216 (4%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY +NGGT +AIAG D+ + A DTR+S GY+ILSR+ K+ + DK V A+SG ADV
Sbjct: 8 FDPYTDNGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADV 67
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+ L K + Y + K+++ +LLS +YY+R FP+Y+ +++ G+D+EGKG V
Sbjct: 68 QRLIKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGAV 127
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YD +GS R Y S G+G+ +I P LD + S + ++ A +L+++
Sbjct: 128 YSYDVIGSTLRTRYGSAGTGNAMICPILDEAILSKNE---------AEITREFAFELIQS 178
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F S ERDIYT + + + ++ DGI ELRKD
Sbjct: 179 AFRSCAERDIYTGDSVVAMCISADGIQERTFELRKD 214
>gi|425770053|gb|EKV08528.1| hypothetical protein PDIP_68200 [Penicillium digitatum Pd1]
gi|425771744|gb|EKV10181.1| hypothetical protein PDIG_58720 [Penicillium digitatum PHI26]
Length = 259
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 138/238 (57%), Gaps = 20/238 (8%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
KQH ++ PY +NGG+ + I GAD+ + A DTR ++GY+I SR K+ K+
Sbjct: 25 KQH-SFYPYTDNGGSTLGITGADFAILAGDTRSTSGYNINSRMVPKVFKIGGDDETGEGA 83
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+++ GF AD AL++ L +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 84 TIILSVVGFAADGNALKEKLDTVVKMYKYQHGKSMSVGACAQRLSTILYEKRFFPYYVHA 143
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP---------L 165
+L GLD EG G +Y+YD VGSYER + G+ S+LIMPFLDNQ+ S +
Sbjct: 144 ILAGLDEEGVGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNSKNQYIPGSGEGHA 203
Query: 166 LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L+P + PL + A LV+ F SA ER I + L+++++ ++GI + L++D
Sbjct: 204 LVPKK--AEPLDKETAKKLVQDAFTSAVERHIEVGDGLQMLIVTREGIEEVFHALKQD 259
>gi|159118134|ref|XP_001709286.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
gi|157437402|gb|EDO81612.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
Length = 254
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 132/220 (60%), Gaps = 9/220 (4%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
+ P + PY +NGGT +AIAG D+ + A DTR+S GY+ILSR+ K+ + DK V A+SG
Sbjct: 44 KDPDFDPYIDNGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGM 103
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
ADV+ L K + Y + K+++ +LLS +YY+R FP+Y+ +++ G+D+EG
Sbjct: 104 HADVQRLLKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEG 163
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
+G VY+YD +GS R Y S G+G+ +I P LD + S + ++ A +
Sbjct: 164 RGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEAILSKNE---------AEITREFAFE 214
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L+++ F S ERDIYT + + + ++ DGI ELRKD
Sbjct: 215 LIQSAFRSCAERDIYTGDSVVAMCISADGIQERTFELRKD 254
>gi|322708662|gb|EFZ00239.1| proteasome component C5 [Metarhizium anisopliae ARSEF 23]
Length = 263
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC--------VMA 59
++PY +NGG+ + IAGAD+ + A DTR ++GYSI SR K+ K+ V++
Sbjct: 33 FNPYTDNGGSTLGIAGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGSTSSQDDATIVLS 92
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD AL+ L IY+++H K M+ A + LS LY KRFFPYY +LGGL
Sbjct: 93 VCGFAADGTALRDQLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYVTAMLGGL 152
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT----- 174
D EGKG VY+YD VGSYER + G+ +LIMPFLDNQ+ + + + +
Sbjct: 153 DEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYVPGSGEGHNLQERE 212
Query: 175 --PLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS A+ ++K F A ER I + L+++++ KDGI + ++KD
Sbjct: 213 RHPLSRAQVETIIKDAFDGAVERHIEVGDALQMLIITKDGIEETILPMKKD 263
>gi|440636579|gb|ELR06498.1| 20S proteasome subunit beta 6 [Geomyces destructans 20631-21]
Length = 266
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 137/237 (57%), Gaps = 18/237 (7%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADK------- 55
+QH + PY +NGG+ +AIAG ++ + A DTR ++GY+I +R K+ K+
Sbjct: 32 RQH-RFDPYTDNGGSTLAIAGDNFAILAGDTRSTSGYNINTRYEPKVFKIGGSGSTQRDA 90
Query: 56 -CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+++ GF AD AL++ L +Y++QH K M+ A Q LS LY KRFFPYY+
Sbjct: 91 TLILSVVGFAADANALKERLDTVVKLYRYQHGKAMTVKAAAQRLSIILYQKRFFPYYAHA 150
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 174
+LGGLD EGKG VY+YD VGSYER + G+ ++LIMPFLD+Q+ + P
Sbjct: 151 ILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDSQVNFKNQ-YEPGSGVGH 209
Query: 175 PLSEAEAV--------DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L E E V DLVK F SA ER I + L ++V+ KDGI Y L++D
Sbjct: 210 NLKERERVLLGRDVVEDLVKDAFDSAVERHIEVGDGLLMMVITKDGIEEIYKPLKQD 266
>gi|322698009|gb|EFY89783.1| proteasome component C5 [Metarhizium acridum CQMa 102]
Length = 263
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC--------VMA 59
++PY +NGG+ + IAGAD+ + A DTR ++GYSI SR K+ K+ V++
Sbjct: 33 FNPYTDNGGSTLGIAGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGSTASQDDATIVLS 92
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD AL+ L IY+++H K M+ A + LS LY KRFFPYY +LGGL
Sbjct: 93 VCGFAADGTALRDQLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYVTAMLGGL 152
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA------- 172
D EGKG VY+YD VGSYER + G+ +LIMPFLDNQ+ + + + +
Sbjct: 153 DEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYVPGSGEGHDLQERE 212
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS A+ ++K F A ER I + L+++++ KDGI + ++KD
Sbjct: 213 RHPLSRAQVETIIKDAFDGAVERHIEVGDALQMLIITKDGIEETILPMKKD 263
>gi|391863506|gb|EIT72814.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Aspergillus oryzae 3.042]
Length = 261
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 135/237 (56%), Gaps = 16/237 (6%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD------- 54
K+H ++ PY +NGG+ + I GAD+ + A DTR GY+I SR K+ K+
Sbjct: 26 NKEH-SFYPYTDNGGSTLGITGADFAILAGDTRSVAGYNINSRYAPKVFKIGGDDDTGEG 84
Query: 55 -KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
+++ GF AD +AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 85 AHIILSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVH 144
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA- 172
+L GLD EG+G +Y+YD VGSYER + GS ++LIMPFLDNQ+ + + + D
Sbjct: 145 AILAGLDEEGEGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPSSGDGH 204
Query: 173 ------VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL LV+ F SA ER I + L+++V+ ++GI Y L+KD
Sbjct: 205 ALEPKKPEPLPRETVEQLVRDAFTSAVERHIEVGDGLQMMVITQNGIEEIYTPLKKD 261
>gi|346975013|gb|EGY18465.1| proteasome component C5 [Verticillium dahliae VdLs.17]
Length = 264
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 137/231 (59%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLA-------DKCVMAS 60
++PY +NGG+ +AIAGAD+ + A DTR ++GYSI SR K+ K+ D ++ S
Sbjct: 34 FNPYTDNGGSTLAIAGADFAIVAGDTRSTSGYSINSRYSPKVYKIGGTTSNQDDATILLS 93
Query: 61 S-GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL++ L A IY+++H K MS A + LS LY KRFFPYY + +LGGL
Sbjct: 94 VVGFAADGEALKERLDAICKIYRYRHGKAMSVTACAKRLSTILYQKRFFPYYVYAILGGL 153
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA-------QDA 172
D +G G V++YD VGSYER + G+ ++LI PFLDNQ+ + + + +
Sbjct: 154 DEKGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVPGSGVGHELKERE 213
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
V PL EA LVK F A ER I + L+++V+ GI + L+KD
Sbjct: 214 VVPLERKEAEILVKDAFDGAVERHIEVGDALQMMVITSKGIEEILLPLKKD 264
>gi|392592203|gb|EIW81530.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 257
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 124/212 (58%), Gaps = 1/212 (0%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
+ QH ++PY NGGT +AIAGAD+ V A DTR S GY+I +R K+ +L D+ V+A
Sbjct: 13 LPTQH-QFNPYTENGGTILAIAGADFSVIAGDTRQSEGYNIQTRYAPKVFRLTDRAVLAV 71
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+GF AD K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++
Sbjct: 72 NGFAADGNMFVKKVKQRLEWYRHAHGKDMPLRAIARLIQTMLYARRFFPYYVYNILGGIE 131
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+G G VY++D VGSYER + G+ +L+ PFLDNQ+ + P T L
Sbjct: 132 EDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTAPPDSAHPTHLPLPT 191
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDG 212
+ +V F SATER I + LE+ ++ G
Sbjct: 192 VLSIVIDSFTSATERHIEVGDGLEMYIVLARG 223
>gi|388581296|gb|EIM21605.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 255
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 127/206 (61%), Gaps = 6/206 (2%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
+++PY NGGT +AIAG D+CV A DTR S G+SI SR +K+ +L +K +A++GF AD
Sbjct: 2 SFNPYTQNGGTVLAIAGKDFCVVAGDTRQSEGFSIQSRYETKVWRLNEKATIAANGFAAD 61
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
K L K + R Y++ HNK+M ++ +++ LY KRFFP+YS+ ++GG+D+EG G
Sbjct: 62 CKQLVKRVKWRLETYKYAHNKEMPLKSIARMVQTMLYGKRFFPFYSYVIIGGIDDEGTGA 121
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPAQDAVTPLSEAEAV 182
VY +D VGSYER + G+ +L+ PFLDNQ+ + P+ P PL A+
Sbjct: 122 VYGFDPVGSYERETCRAAGAAQSLLQPFLDNQIYFRNQEPADPANPPIPGNLPLETVLAI 181
Query: 183 DLVKTCFASATERDIYTANKLEIVVL 208
V F ATER I + LE+ V+
Sbjct: 182 --VTDSFTGATERHIEVGDALEMYVV 205
>gi|380480528|emb|CCF42385.1| proteasome A-type and B-type [Colletotrichum higginsianum]
Length = 263
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 138/236 (58%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLA-------DK 55
+QH ++PY +NGG+ +AIAGA + + A DTR ++GYSI SR K+ K+ D
Sbjct: 29 RQH-RFNPYTDNGGSXLAIAGAXFAIVAGDTRSTSGYSINSRYTPKVFKIGGTTSTQEDA 87
Query: 56 CVMASS-GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+M S GF AD +AL+ L IY+++H K MS A + LS LY KRFFPYY +
Sbjct: 88 TIMLSVVGFAADGEALRDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRFFPYYVYA 147
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA----- 169
+LGGLD EG G V++YD VGSYER + G+ ++LI PFLDNQ+ + + +
Sbjct: 148 ILGGLDEEGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYIPGSGVGHE 207
Query: 170 --QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ PL EA LVK F A ER I + L+++++ K+GI + L+KD
Sbjct: 208 LQERPRVPLERKEAEILVKDAFDGAVERHIEVGDHLQMMIITKNGIEEVLLPLKKD 263
>gi|67539228|ref|XP_663388.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|40743687|gb|EAA62877.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|259484727|tpe|CBF81196.1| TPA: putative proteasome core component, beta 6 subunit (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 261
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 135/237 (56%), Gaps = 16/237 (6%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADK------ 55
K+H ++ PY +NGG+ + I G D+ V A DTR ++GY+I SR K+ K+ +
Sbjct: 26 NKEH-SFYPYTDNGGSVLGITGKDFAVLAGDTRSTSGYNINSRYVPKVFKIGGEDETGKG 84
Query: 56 --CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
+++ GF AD AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 85 AHILLSVVGFAADGLALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVQ 144
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA- 172
+L GLD EGKG +Y YD VGSYER S G+ S+LIMPFLDNQ+ + + + +
Sbjct: 145 AILAGLDEEGKGALYGYDPVGSYEREQCRSAGAASSLIMPFLDNQVNLKNQYIPGSGEGH 204
Query: 173 ------VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
P+S LV+ F SA ER I + L+++V+ DGI Y L+KD
Sbjct: 205 ALEARKPEPMSRETVEQLVRDAFTSAVERHIEVGDGLQMLVITADGIEEVYHPLKKD 261
>gi|121709884|ref|XP_001272558.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
gi|119400708|gb|EAW11132.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
Length = 261
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 136/237 (57%), Gaps = 16/237 (6%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD------- 54
K+H ++ PY +NGG+ + I G+D+ + A DTR GY+I SR K+ K+
Sbjct: 26 VKEH-SFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEG 84
Query: 55 -KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
+ +++ GF AD +AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 85 ARILLSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVH 144
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA- 172
+L GLD EGKG +Y+YD VGSYER + GS ++LIMPFLDNQ+ + + + +
Sbjct: 145 AILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGH 204
Query: 173 ------VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL LV+ F SA ER I + L+++V+ + GI ++ L+KD
Sbjct: 205 ALEPKKAEPLPRGTVEQLVRDAFTSAVERHIEVGDGLQMMVITESGIEEIFIPLKKD 261
>gi|115400894|ref|XP_001216035.1| proteasome component C5 [Aspergillus terreus NIH2624]
gi|114189976|gb|EAU31676.1| proteasome component C5 [Aspergillus terreus NIH2624]
Length = 261
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 136/236 (57%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
K+H ++ PY +NGG+ + I GAD+ + A DTR GY+I +R K+ K+
Sbjct: 27 KEH-SFYPYTDNGGSTLGITGADFAILAGDTRSVAGYNINTRYDPKVFKIGGDDETGEGA 85
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+ +++ GF AD AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 86 QILLSVVGFAADGHALKERLDAVVKMYKYQHGKPMSVTACAQRLSTILYQKRFFPYYVHA 145
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+L GLD +GKG +Y+YD VGSYER + GS ++LIMPFLDNQ+ + + + +
Sbjct: 146 ILAGLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHA 205
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL A LV+ F SA ER I + L+++V+ +DGI Y L+KD
Sbjct: 206 LEPKKPEPLPRATVERLVRDAFTSAVERHIEVGDGLQMMVITRDGIEEIYTPLKKD 261
>gi|320586233|gb|EFW98912.1| proteasome component [Grosmannia clavigera kw1407]
Length = 265
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 138/236 (58%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
+QH + PY +NGGT +AIAGAD+ + A DTR + GYSI SR K+ K+
Sbjct: 31 RQH-RFDPYTDNGGTTLAIAGADFAIVAGDTRHTAGYSINSRFSPKVFKIGGSTADQHDA 89
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
+ V++ GF AD +AL++ L +Y+++H K +S A + LS LY KRFFPYY+
Sbjct: 90 RIVLSVVGFAADGEALKERLDTICKMYRYRHGKPISVNACAKRLSTILYQKRFFPYYTHA 149
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA----- 169
+LGGLD +G G +Y+YD VGSYER + G+ ++LI PFLDNQ+ + + +
Sbjct: 150 ILGGLDEDGIGAIYSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVPGSGIGHD 209
Query: 170 --QDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ PL + +LVK F A ER I + L+++V+ KDGI + L+KD
Sbjct: 210 LMERPRVPLPRNDVEELVKDAFDGAVERHIEVGDYLQMLVVTKDGIEEVVLPLKKD 265
>gi|240273184|gb|EER36706.1| proteasome component [Ajellomyces capsulatus H143]
gi|325089210|gb|EGC42520.1| proteasome component [Ajellomyces capsulatus H88]
Length = 266
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 137/246 (55%), Gaps = 33/246 (13%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
KQH + PY +NGG+ + IAG DY + A DTR +GY+I +R K+ K+ +
Sbjct: 29 KQHHGFYPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDEGGEGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y+++H K MS A Q L+ LY KRFFPYY
Sbjct: 89 HLVLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--------------- 159
+L G+D +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+
Sbjct: 149 ILAGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNA 208
Query: 160 --KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREY 217
K P P P +D A+ LV F SA ER I + L+++V+ ++GI Y
Sbjct: 209 MDKQPRPSEPPPRDV--------ALQLVNDAFTSAVERHIEVGDGLQVMVITREGIQEIY 260
Query: 218 MELRKD 223
L+KD
Sbjct: 261 HPLKKD 266
>gi|225554384|gb|EEH02683.1| proteasome component C5 [Ajellomyces capsulatus G186AR]
Length = 266
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 137/246 (55%), Gaps = 33/246 (13%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
KQH + PY +NGG+ + IAG DY + A DTR +GY+I +R K+ K+ +
Sbjct: 29 KQHHGFYPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDEGGEGA 88
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y+++H K MS A Q L+ LY KRFFPYY
Sbjct: 89 HLVLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHA 148
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--------------- 159
+L G+D +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+
Sbjct: 149 ILAGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNA 208
Query: 160 --KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREY 217
K P P P +D A+ LV F SA ER I + L+++V+ ++GI Y
Sbjct: 209 MDKQPRPSEPPPRDV--------ALQLVNDAFTSAVERHIEVGDGLQVMVITREGIQEIY 260
Query: 218 MELRKD 223
L+KD
Sbjct: 261 HPLKKD 266
>gi|159124092|gb|EDP49210.1| proteasome component Prs3, putative [Aspergillus fumigatus A1163]
Length = 261
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 135/237 (56%), Gaps = 16/237 (6%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC----- 56
++H ++ PY +NGG+ + I G+D+ + A DTR GY+I SR K+ K+
Sbjct: 26 VREH-SFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEG 84
Query: 57 ---VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
+++ GF AD +AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 85 AHILLSVVGFAADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVH 144
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA- 172
+L GLD EGKG +Y+YD VGSYER + GS ++LIMPFLDNQ+ + + + +
Sbjct: 145 AILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGH 204
Query: 173 ------VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL A LV+ F SA ER I + L+++V+ + GI Y L+KD
Sbjct: 205 ALEPKKAEPLPRATVEQLVRDAFTSAVERHIEVGDGLQMMVITQRGIEEIYTPLKKD 261
>gi|70991375|ref|XP_750536.1| proteasome component Prs3 [Aspergillus fumigatus Af293]
gi|66848169|gb|EAL88498.1| proteasome component Prs3, putative [Aspergillus fumigatus Af293]
Length = 261
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 135/237 (56%), Gaps = 16/237 (6%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC----- 56
++H ++ PY +NGG+ + I G+D+ + A DTR GY+I SR K+ K+
Sbjct: 26 VREH-SFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEG 84
Query: 57 ---VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
+++ GF AD +AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 85 AHILLSVVGFAADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVH 144
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA- 172
+L GLD EGKG +Y+YD VGSYER + GS ++LIMPFLDNQ+ + + + +
Sbjct: 145 AILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGH 204
Query: 173 ------VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL A LV+ F SA ER I + L+++V+ + GI Y L+KD
Sbjct: 205 ALEPKKAEPLPRATVEQLVRDAFTSAVERHIEVGDGLQMMVITQRGIEEIYTPLKKD 261
>gi|119467908|ref|XP_001257760.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
gi|119405912|gb|EAW15863.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
Length = 261
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 135/237 (56%), Gaps = 16/237 (6%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKC----- 56
++H ++ PY +NGG+ + I G+D+ + A DTR GY+I SR K+ K+
Sbjct: 26 VREH-SFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEG 84
Query: 57 ---VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
+++ GF AD +AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 85 AHILLSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVH 144
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA- 172
+L GLD EGKG +Y+YD VGSYER + GS ++LIMPFLDNQ+ + + + +
Sbjct: 145 AILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGH 204
Query: 173 ------VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL A LV+ F SA ER I + L+++V+ + GI Y L+KD
Sbjct: 205 ALEPKKAEPLPRATVEQLVRDAFTSAVERHIEVGDGLQMMVITQRGIEEIYTPLKKD 261
>gi|429856646|gb|ELA31546.1| proteasome component c5 [Colletotrichum gloeosporioides Nara gc5]
Length = 264
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 136/231 (58%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLA-------DKCVMAS 60
++PY +NGG+ +AIAGADY + A DTR ++GYSI SR K+ K+ D ++ S
Sbjct: 34 FNPYTDNGGSTLAIAGADYAIMAGDTRSTSGYSINSRYTPKVFKIGGTTSSQEDATILLS 93
Query: 61 S-GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD +AL+ L IY+++H K MS A + LS LY KRFFPYY + +LGGL
Sbjct: 94 VVGFAADGEALKDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRFFPYYVYAILGGL 153
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA-------QDA 172
D +G G V++YD VGSYER + G+ ++LI PFLDNQ+ + + + +
Sbjct: 154 DEDGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVPGSGVGHELQERP 213
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL EA LVK F A ER I + L+++++ K+G+ + L+KD
Sbjct: 214 RVPLERKEAEILVKDAFDGAVERHIEVGDHLQMMIITKNGVEEVLLPLKKD 264
>gi|195398923|ref|XP_002058070.1| GJ15881 [Drosophila virilis]
gi|194150494|gb|EDW66178.1| GJ15881 [Drosophila virilis]
Length = 262
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 1/212 (0%)
Query: 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQ 71
D NGGT +AIAG ++ V A+DTR+ +G SI +RD SK+ + ++AS+G D ++
Sbjct: 52 DTNGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMT 111
Query: 72 KLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
LL R +Y+ +HNK +S A+ Q++S +Y +RFFPY++ +L G+D GKG VY YD
Sbjct: 112 SLLQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYYD 171
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
VG ER Y GS +++P LD+ L L+P D PL + A+ L + C
Sbjct: 172 PVGHMERCRYRVLGSSGKMLLPALDHGLGWEHHTLVPP-DQYPPLDKERALALARNCLRV 230
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A++RD++T + + ++ KDGI E + LRKD
Sbjct: 231 ASDRDLFTGDTGVLKLITKDGIETETLPLRKD 262
>gi|195398909|ref|XP_002058063.1| GJ15696 [Drosophila virilis]
gi|194150487|gb|EDW66171.1| GJ15696 [Drosophila virilis]
Length = 256
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 1/212 (0%)
Query: 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQ 71
D NGGT +AIAG ++ V A+DTR+ +G SI +RD SK+ + ++AS+G D ++
Sbjct: 46 DTNGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMT 105
Query: 72 KLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
LL R +Y+ +HNK +S A+ Q++S +Y +RFFPY++ +L G+D GKG VY YD
Sbjct: 106 SLLQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYYD 165
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
VG ER Y GS +++P LD+ L L+P D PL + A+ L + C
Sbjct: 166 PVGHMERCRYRVLGSSGKMLLPALDHGLGWEHHTLVPP-DQYPPLDKERALALARNCLRV 224
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A++RD++T + + ++ KDGI E + LRKD
Sbjct: 225 ASDRDLFTGDTGVLKLITKDGIETETLPLRKD 256
>gi|299743502|ref|XP_001835816.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
gi|298405683|gb|EAU85881.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
Length = 253
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 126/215 (58%), Gaps = 4/215 (1%)
Query: 1 MTKQHP---AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCV 57
+ Q P A++PY NGGT +A+AGAD+ V A DTR S GY+I +R K+ KL DK V
Sbjct: 4 LAAQQPHQRAFNPYTENGGTILAVAGADFTVIAGDTRQSEGYNIQTRYAPKVFKLTDKAV 63
Query: 58 MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLG 117
+A +GF AD K + R Y+H H K M ++ +L+ LY +RFFPYY +N+LG
Sbjct: 64 LAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPIRSIARLIQTMLYARRFFPYYVYNILG 123
Query: 118 GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 177
G++ +G G VY++D VGSYER + G+ +L+ PFLDNQ+ + P L
Sbjct: 124 GIEEDGTGAVYSFDPVGSYERETCRAAGAAQSLVQPFLDNQIYFKNQTPAPGTSFPQHLP 183
Query: 178 EAEAVDLVKTCFASATERDIYTANKLEI-VVLNKD 211
+ LV F ATER I + LE+ VVL+++
Sbjct: 184 LQTVLALVIDSFTGATERHIEVGDGLEMYVVLSQN 218
>gi|400601377|gb|EJP69020.1| proteasome A-type and B-type [Beauveria bassiana ARSEF 2860]
Length = 262
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 137/231 (59%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADK--------CVMA 59
++PY +NGG+ + IAGAD+ + A DTR ++GYSI SR K+ K+ V++
Sbjct: 32 FNPYTDNGGSTLGIAGADFSIMAGDTRHTSGYSINSRMAPKVFKIGGTNASQDDATIVLS 91
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD AL+ L IY+++H K M+ A + LS LY KRFFPYY+ +LGGL
Sbjct: 92 VCGFAADGDALRDRLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYTHALLGGL 151
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA-------QDA 172
D EGKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ + + + +
Sbjct: 152 DEEGKGAIYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFRNQYIPGSGTGHDLQERP 211
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL+ + ++K F A ER I + L++++++K+GI ++ L+KD
Sbjct: 212 REPLTRPQVETIIKDAFDGAAERHIEVGDALQMLIVSKNGIEEVFVPLKKD 262
>gi|258564630|ref|XP_002583060.1| proteasome component C5 [Uncinocarpus reesii 1704]
gi|237908567|gb|EEP82968.1| proteasome component C5 [Uncinocarpus reesii 1704]
Length = 259
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 137/235 (58%), Gaps = 15/235 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL-ADKC----- 56
KQH + PY +NGG+ + I G ++ + A DTR +GY+I +R K+ K+ AD
Sbjct: 26 KQH-GFYPYTDNGGSTLGITGPNFAILAGDTRSVSGYNINTRFAPKVFKIGADDAGEGGH 84
Query: 57 -VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV 115
+++ GF AD +AL++ L A +Y++ H K MS A Q LS LY KRFFPYY +
Sbjct: 85 IILSVVGFSADGQALKERLDAIVKMYEYHHGKPMSVKACAQRLSTILYSKRFFPYYVHAI 144
Query: 116 LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA--- 172
LGGLD +GKG +Y+YD VGSYER + G+ ++LIMPFLDNQ+ + + A+
Sbjct: 145 LGGLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAERGDEL 204
Query: 173 ----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS A++LV+ F SA ER I + L+ +++ DGI L+KD
Sbjct: 205 VPRVPEPLSRDTALELVRDAFTSAVERHIEVGDGLQTMIITSDGIQEIITPLKKD 259
>gi|346320799|gb|EGX90399.1| proteasome component C5 [Cordyceps militaris CM01]
Length = 262
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 136/231 (58%), Gaps = 15/231 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADK--------CVMA 59
++PY +NGG+ +AIAGAD+ + A DTR ++GYSI SR K+ K+ V++
Sbjct: 32 FNPYTDNGGSTLAIAGADFSIIAGDTRHTSGYSINSRMAPKVFKIGGTNASQDDATIVLS 91
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
GF AD AL+ L IY+++H K M+ A + LS LY KRFFPYY+ +LGGL
Sbjct: 92 VCGFAADGDALRDRLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYTHALLGGL 151
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA-------QDA 172
D EG G VY+YD VGSYER + G+ ++LIMPFLDNQ+ + + + +
Sbjct: 152 DEEGVGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFRNQYVPGSGIGHNLKERP 211
Query: 173 VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS + ++K F A ER I + L+++++ K+GI ++ L+KD
Sbjct: 212 HAPLSRVQVETIIKDAFDGAAERHIEVGDSLQMLIVTKNGIEEVFVPLKKD 262
>gi|327304499|ref|XP_003236941.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
gi|326459939|gb|EGD85392.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
Length = 261
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 138/236 (58%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL-ADK------ 55
KQH ++ PY +NGG+ + IAG ++ + A DTR +GY+I +R K+ K+ AD+
Sbjct: 27 KQH-SFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGG 85
Query: 56 -CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
++ GF AD +AL++ L A +Y++ HNK MS A Q LS LY KRFFPYY
Sbjct: 86 HIILCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHA 145
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+L G+D EGKG +Y+YD VGSYER + GS ++L+MPFLDNQ+ + + +
Sbjct: 146 ILAGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNFKNQYVPGSGQGNA 205
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS A LV F S+ ER I + L+I+++ KDGI Y L++D
Sbjct: 206 SVARKPEPLSREGAQQLVHDAFTSSVERHIEVGDGLQIMIVTKDGIEEVYRPLKRD 261
>gi|393229883|gb|EJD37498.1| proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 242
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 122/210 (58%), Gaps = 14/210 (6%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q ++PY NGGT +A+AGAD+ V A DTR + GYSI +R K+ +L DK V+A +GF
Sbjct: 2 QRHGFNPYTENGGTILAVAGADFAVVAGDTRQTEGYSIQTRYAPKVFRLTDKAVLAVNGF 61
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H+K M ++ +++ LY KRFFPYY +N+LGG+D +G
Sbjct: 62 AADGNMFVKKVKQRLEWYRHAHSKDMPLQSIARMIQTMLYAKRFFPYYVYNILGGIDEQG 121
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL-----KSPSPLLLPAQDAVTPLSE 178
G VY++D VGSYER + G+ +L+ PFLDNQ+ + P LP ++
Sbjct: 122 VGAVYSFDPVGSYERETCRAAGAAQSLVQPFLDNQIYFKNQQGDHPAHLPLDHVLS---- 177
Query: 179 AEAVDLVKTCFASATERDIYTANKLEIVVL 208
LV F ATER I + L++ V+
Sbjct: 178 -----LVTDAFTGATERHIEVGDGLQMFVI 202
>gi|315045602|ref|XP_003172176.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
gi|311342562|gb|EFR01765.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
Length = 261
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 138/236 (58%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL-ADK------ 55
KQH ++ PY +NGG+ + IAG ++ + A DTR +GY+I SR K+ K+ AD+
Sbjct: 27 KQH-SFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINSRYAPKVFKIGADEHTGEGG 85
Query: 56 -CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
++ GF AD +AL++ L A +Y++ HNK MS A Q LS LY KRFFPYY
Sbjct: 86 HIILCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHA 145
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+L G+D EGKG +Y+YD VGSYER + GS ++L+MPFLDNQ+ + + +
Sbjct: 146 ILAGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNFKNQYVPGSGQGNA 205
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS A LV F S+ ER I + L+++++ KDGI Y L++D
Sbjct: 206 SVARKPEPLSREGAQQLVHDAFTSSVERHIEVGDGLQMMIVTKDGIEEVYRPLKRD 261
>gi|448105494|ref|XP_004200509.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|448108619|ref|XP_004201140.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359381931|emb|CCE80768.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359382696|emb|CCE80003.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
Length = 241
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 131/223 (58%), Gaps = 7/223 (3%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
+++PY +NGGT + IAG D+ V A DTR GYSI SR ++ + D +M ++GF AD
Sbjct: 20 SFNPYQDNGGTVLGIAGEDFAVLAGDTRQVVGYSINSRYEPRVFDVGDNILMTANGFSAD 79
Query: 67 VKALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
AL Y+ H K++S + + + + LY KRFFP+Y ++ GL++EGKG
Sbjct: 80 GNALINKFKNSLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPFYVSTLIAGLNDEGKG 139
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAE 180
VY+YD VGSYE + G+ ++LIMPFLDNQ+ + P + + LS E
Sbjct: 140 VVYSYDPVGSYEVEQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTNGEKKKELRYLSLDE 198
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
V LV+ F S TER IY + LEI ++NKDG+ EY L++D
Sbjct: 199 VVQLVRDAFTSVTERHIYVGDGLEIYIVNKDGVKVEYYPLKRD 241
>gi|149237248|ref|XP_001524501.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452036|gb|EDK46292.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 243
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 131/222 (59%), Gaps = 8/222 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI SR ++ + D +M ++GF AD
Sbjct: 24 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPRVHNVGDNILMTANGFAADG 83
Query: 68 KALQKLLAARHLIYQHQH-NKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
AL Y+ + N+++ + + + + LY KRFFPY S ++ GLD EGKG
Sbjct: 84 VALIDRFKQSFKWYKFDNENRKLEISSAARYIQHLLYGKRFFPYVS-TLIAGLDEEGKGA 142
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEA 181
VY+YD VGSYER + G+ ++LIMPFLDNQ+ + +P D + LS E
Sbjct: 143 VYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YVPGTDGKEKKPLKYLSLEEV 201
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV+ F SA ER IY + LEI+++ KDG+ EY L++D
Sbjct: 202 IQLVRDAFTSAGERHIYVGDGLEIMIVTKDGVRTEYFPLKRD 243
>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 217
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 127/207 (61%), Gaps = 5/207 (2%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
+ H ++PY NNGGT VA + V AADTR+S GY+I +R+ SK+ KL CV+ +SG
Sbjct: 2 EHHSDFNPYVNNGGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVIGTSG 61
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
QAD+ AL L + +Y+ +H+++ + QLLS LY +RFFPYY+FN+L G+D
Sbjct: 62 MQADMHALHSALERQIELYRFKHHREPGISVIAQLLSTILYSRRFFPYYTFNILCGVDEN 121
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
G+G +DA+G+Y Y ++G+ S+LIM LDN L S + Q S E +
Sbjct: 122 GRGITCGFDAIGNYGFDAYMAKGTSSSLIMSILDNHLTSRNQ-----QKHNEIQSLEELI 176
Query: 183 DLVKTCFASATERDIYTANKLEIVVLN 209
+++K SA ERDI+T + E++V++
Sbjct: 177 NVIKGAMTSAVERDIFTGDAAEVIVID 203
>gi|296805321|ref|XP_002843485.1| proteasome component C5 [Arthroderma otae CBS 113480]
gi|238844787|gb|EEQ34449.1| proteasome component C5 [Arthroderma otae CBS 113480]
Length = 261
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 138/236 (58%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL-ADK------ 55
KQH ++ PY +NGG+ + IAG ++ + A DTR +GY+I +R K+ K+ AD+
Sbjct: 27 KQH-SFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGG 85
Query: 56 -CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
++ GF AD +AL++ L A +Y++ HNK MS A Q LS LY KRFFPYY
Sbjct: 86 HMILCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHA 145
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+L G+D EGKG +Y+YD VGSYER + GS ++L+MPFLDNQ+ + + +
Sbjct: 146 ILAGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNFKNQYVAGSGQGNA 205
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS A LV F S+ ER I + L+++++ KDGI Y L++D
Sbjct: 206 SVPRKPEPLSREGAQQLVHDAFTSSVERHIEVGDGLQMMIVTKDGIEEVYRPLKRD 261
>gi|358054309|dbj|GAA99235.1| hypothetical protein E5Q_05929 [Mixia osmundae IAM 14324]
Length = 250
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 120/210 (57%), Gaps = 5/210 (2%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q A++PY NGGT +A++ D+ V A+DTR S GYSI SR ++ L D+ VMA+ GF
Sbjct: 17 QQRAFNPYSENGGTILAVSSRDFAVVASDTRQSEGYSIQSRYQPRVFALTDETVMATQGF 76
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD L K L R Y H H K A+ +L+ LY KRFFPYYS+ +LGG+D +G
Sbjct: 77 MADSNTLVKKLRQRLEWYFHTHQKYPDLTAIARLVQTMLYGKRFFPYYSYVILGGIDRDG 136
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS-----PSPLLLPAQDAVTPLSE 178
G VY++D VGSYER S G+ +L+ PFLDNQ+ P + ++ + L
Sbjct: 137 TGAVYSFDPVGSYERESCRSAGAAQSLVQPFLDNQVMGKNQNLPKGESILDEEGRSNLPL 196
Query: 179 AEAVDLVKTCFASATERDIYTANKLEIVVL 208
+ LV F ATER I + LE+ VL
Sbjct: 197 ERVLGLVVDSFTGATERHIEVGDGLEMYVL 226
>gi|358373509|dbj|GAA90107.1| proteasome component Prs3 [Aspergillus kawachii IFO 4308]
Length = 260
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 134/236 (56%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
++H ++ PY +NGG+ + I G+D+ + A DTR GY+I SR K+ K+
Sbjct: 26 REH-SFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDDESGEGA 84
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 85 NIVLSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHA 144
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+L GLD +GKG +Y+YD VGSYER + GS ++LIMPFLDNQ+ + + + +
Sbjct: 145 ILAGLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHA 204
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL LV+ F SA ER I + L+++V+ + GI Y L+KD
Sbjct: 205 LEPKKAEPLPRDTVEQLVRDAFTSAVERHIEVGDGLQMMVITRSGIEEIYYPLKKD 260
>gi|302501484|ref|XP_003012734.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
gi|302660909|ref|XP_003022128.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
gi|291176294|gb|EFE32094.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
gi|291186059|gb|EFE41510.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
Length = 261
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 138/236 (58%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL-ADK------ 55
KQH ++ PY +NGG+ + IAG ++ + A DTR +GY+I +R K+ K+ AD+
Sbjct: 27 KQH-SFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGG 85
Query: 56 -CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
++ GF AD +AL++ L A +Y++ HNK MS A Q LS LY KRFFPYY
Sbjct: 86 HIILCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHA 145
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+L G+D EGKG +Y+YD VGSYER + GS ++L+MPFLDNQ+ + + +
Sbjct: 146 ILAGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNFKNQYVPGSGQGNA 205
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS A LV F S+ ER I + L+++++ KDGI Y L++D
Sbjct: 206 SVARKPEPLSREGAQQLVHDAFTSSVERHIEVGDGLQMMIVTKDGIEEVYRPLKRD 261
>gi|407420511|gb|EKF38599.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi marinkellei]
Length = 246
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 129/218 (59%), Gaps = 6/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRD-YSKIIKLADKCVMASSGFQAD 66
WSPY +NGGT AIAG +Y + DTR++ + I +RD +K+ +L + +AS+G QAD
Sbjct: 33 WSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHTRDDRTKLFQLTEHTFLASTGMQAD 92
Query: 67 VKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
LQ++L R YQ+ + ++ S A+ +L S LY +RFFPYY+FN++ GLD +G G
Sbjct: 93 RLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEKGAG 152
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
Y+YD VGS E Y + GS S+ + P +D L + Q A LS E ++++
Sbjct: 153 VCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQHMV----QQAPAELSMTETLEML 208
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F A ERDI+T + + ++ DGI E ELRKD
Sbjct: 209 KNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRKD 246
>gi|71655250|ref|XP_816231.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70881343|gb|EAN94380.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 129/218 (59%), Gaps = 6/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRD-YSKIIKLADKCVMASSGFQAD 66
WSPY +NGGT AIAG +Y + DTR++ + I +RD +K+ +L + +AS+G QAD
Sbjct: 33 WSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGMQAD 92
Query: 67 VKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
LQ++L R YQ+ + ++ S A+ +L S LY +RFFPYY+FN++ GLD +G G
Sbjct: 93 RLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEKGAG 152
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
Y+YD VGS E Y + GS S+ + P +D L + Q A LS E ++++
Sbjct: 153 VCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQHMV----QQAPAELSMTETLEML 208
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F A ERDI+T + + ++ DGI E ELRKD
Sbjct: 209 KNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRKD 246
>gi|71654519|ref|XP_815877.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70880966|gb|EAN94026.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 129/218 (59%), Gaps = 6/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRD-YSKIIKLADKCVMASSGFQAD 66
WSPY +NGGT AIAG +Y + DTR++ + I +RD +K+ +L + +AS+G QAD
Sbjct: 33 WSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGMQAD 92
Query: 67 VKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
LQ++L R YQ+ + ++ S A+ +L S LY +RFFPYY+FN++ GLD +G G
Sbjct: 93 RLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEKGAG 152
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
Y+YD VGS E Y + GS S+ + P +D L + Q A LS E ++++
Sbjct: 153 VCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQHMV----QQAPAELSMTETLEML 208
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F A ERDI+T + + ++ DGI E ELRKD
Sbjct: 209 KNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRKD 246
>gi|312066298|ref|XP_003136204.1| proteasome subunit beta type 1 [Loa loa]
gi|307768639|gb|EFO27873.1| proteasome subunit beta type 1 [Loa loa]
Length = 258
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 133/226 (58%), Gaps = 7/226 (3%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMST-GYSILSRDYSKIIKLADKCVMA 59
+ KQ W+PY GGT AIAG ++ + A+DTRMS ++L+RD KI L D V++
Sbjct: 37 VVKQASEWNPYSFEGGTTAAIAGDNFAIMASDTRMSQFEINVLTRDAEKIHVLNDSIVLS 96
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
+GF DV L++LL AR Y+ + M+ +LLS LYY+RFFPYY+ +L G+
Sbjct: 97 CAGFYGDVLQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGI 156
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSE 178
D GKG V++YD +G E +GY++ GS +IMPF D Q+ L+ + D P L+
Sbjct: 157 DENGKGAVFSYDPIGCIEHIGYTASGSAEPMIMPFFDCQIG----LVTVSGDVEKPHLTI 212
Query: 179 AEAVDLVKTCFASATERDIYTANKLEIVVLNK-DGIHREYMELRKD 223
A L+K F A ER+I T +K+ +V++ I + ++ LR+D
Sbjct: 213 ERATSLIKDAFRVAAEREISTGDKIHLVIVEAGKPIRKMHLPLRED 258
>gi|145255859|ref|XP_001399123.1| proteasome component C5 [Aspergillus niger CBS 513.88]
gi|134084720|emb|CAK43377.1| unnamed protein product [Aspergillus niger]
gi|350630872|gb|EHA19244.1| hypothetical protein ASPNIDRAFT_54260 [Aspergillus niger ATCC 1015]
Length = 260
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 134/236 (56%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD-------- 54
++H ++ PY +NGG+ + I G+D+ + A DTR GY+I SR K+ K+
Sbjct: 26 REH-SFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDDESGEGA 84
Query: 55 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
V++ GF AD +AL++ L A +Y++QH K MS A Q LS LY KRFFPYY
Sbjct: 85 NIVLSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHA 144
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+L GLD +GKG +Y+YD VGSYER + GS ++LIMPFLDNQ+ + + + +
Sbjct: 145 ILAGLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHA 204
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL LV+ F SA ER I + L+++V+ + G+ Y L+KD
Sbjct: 205 LEPKKAEPLPRDTVEQLVRDAFTSAVERHIEVGDGLQMMVITRSGVEEIYYPLKKD 260
>gi|326472775|gb|EGD96784.1| hypothetical protein TESG_04214 [Trichophyton tonsurans CBS 112818]
gi|326484951|gb|EGE08961.1| proteasome component C5 [Trichophyton equinum CBS 127.97]
Length = 261
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 138/236 (58%), Gaps = 16/236 (6%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL-ADK------ 55
KQH ++ PY +NGG+ + IAG ++ + A DTR +GY+I +R K+ K+ AD+
Sbjct: 27 KQH-SFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGG 85
Query: 56 -CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 114
++ GF AD +AL++ L A +Y++ HNK MS A Q LS LY KRFFPYY
Sbjct: 86 HIILCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHA 145
Query: 115 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 172
+L G+D EGKG +Y+YD VGSYER + GS ++L+MPFLDNQ+ + + +
Sbjct: 146 ILAGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNFKNQYVPGSGQGNA 205
Query: 173 -----VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS A LV F S+ ER I + L+++++ +DGI Y L++D
Sbjct: 206 SVARKPEPLSREGAQQLVHDAFTSSVERHIEVGDGLQMMIVTRDGIEEVYRPLKRD 261
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 125/216 (57%), Gaps = 9/216 (4%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGG +AIAG D+ + A+DTR+S +SI +RD K KL DK V+ SGF D
Sbjct: 29 FSPYAFNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ R + NK M A+ +LS +RFFPYY +N++GGLD EGKG V
Sbjct: 89 LTLTKIIETRL-----KMNKAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAV 143
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R + S S + P L NQ + + + V P A+ LVK
Sbjct: 144 YSFDPVGSYQRDSVKAGASASATLQPLLHNQTGFRR---MQSVEHV-PRILDRAMRLVKD 199
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 200 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 235
>gi|377834609|ref|XP_003689507.1| PREDICTED: proteasome subunit beta type-1-like [Mus musculus]
Length = 276
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 125/216 (57%), Gaps = 9/216 (4%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGG +AIAG D+ + A+DTR+S +SI +RD K KL DK V+ SGF D
Sbjct: 29 FSPYAFNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 88
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ R + NK M A+ +LS +RFFPYY +N++GGLD EGKG V
Sbjct: 89 LTLTKIIETRL-----KMNKAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAV 143
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y++D VGSY+R + S S + P L NQ + + + V P A+ LVK
Sbjct: 144 YSFDPVGSYQRDSVKAGASASATLQPLLHNQTGFRR---MQSVEHV-PRILDRAMRLVKD 199
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 200 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 235
>gi|326428761|gb|EGD74331.1| proteasome subunit beta type-1 [Salpingoeca sp. ATCC 50818]
Length = 180
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 112/176 (63%), Gaps = 6/176 (3%)
Query: 54 DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
DK V+AS+GF DV L K + R Y++QH K MS PA Q+L+ LY KRFFPYY++
Sbjct: 5 DKTVLASAGFHGDVLTLVKRIGVRMQNYEYQHRKPMSTPACAQMLATMLYGKRFFPYYTY 64
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS----PSPLLLPA 169
N+L GLD +GKGCV++YD VGSYER Y + G+ S L+ PFLDNQ ++ P +
Sbjct: 65 NILAGLDADGKGCVFSYDPVGSYEREHYRAAGTASALLQPFLDNQARALARIPDYIGRKN 124
Query: 170 QDAVT--PLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
Q V P+S+ A+ ++K F SA ERDIYT + ++I ++ KDG+ LR D
Sbjct: 125 QQGVVFEPISKERAMTIIKDVFTSAAERDIYTGDAVDIRIVTKDGLEEHRFPLRCD 180
>gi|407853394|gb|EKG06411.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi]
Length = 246
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 128/218 (58%), Gaps = 6/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRD-YSKIIKLADKCVMASSGFQAD 66
WSPY +NGGT AIAG +Y + DTR++ + I +RD +K+ +L + +AS+G QAD
Sbjct: 33 WSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHTRDDRTKLFQLTEHTFLASTGMQAD 92
Query: 67 VKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
LQ++L R YQ+ + ++ S A+ +L S LY +RFFPYY+FN++ GLD +G G
Sbjct: 93 RLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEKGAG 152
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
Y+YD VGS E Y + GS S+ + P +D L + Q A LS E ++++
Sbjct: 153 VCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQHMV----QQAPAELSMTETLEML 208
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K F A ERDI+T + + ++ DGI E ELR D
Sbjct: 209 KNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRND 246
>gi|62087736|dbj|BAD92315.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 196
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 104/150 (69%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 35 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 94
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG V
Sbjct: 95 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAV 154
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDN 157
Y++D VGSY+R + + GS S ++ P LDN
Sbjct: 155 YSFDPVGSYQRDSFKAGGSASAMLQPLLDN 184
>gi|393212888|gb|EJC98386.1| 20S proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 266
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 121/207 (58%), Gaps = 2/207 (0%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY ++GGT +AIAGAD+ V A DTR + Y+I +R K+ +L DK V+A +GF AD
Sbjct: 24 FEPYADSGGTILAIAGADFSVIAGDTRQTDYYNIQTRYAPKVFRLTDKAVLAVNGFAADG 83
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++ +G G V
Sbjct: 84 NMFIKKVKQRLEWYRHAHAKDMPLRAVARLIQTMLYAQRFFPYYVYNILGGIEEDGSGAV 143
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--KSPSPLLLPAQDAVTPLSEAEAVDLV 185
Y++D VGSYER + G+ L+ PFLDNQ+ K+ P L T L + LV
Sbjct: 144 YSFDPVGSYEREACRAAGAAQQLVQPFLDNQIYFKNQQPPLGTVGGHPTHLPLERVLSLV 203
Query: 186 KTCFASATERDIYTANKLEIVVLNKDG 212
F SATER I + LE+ V+ G
Sbjct: 204 VDSFTSATERHIEVGDGLEMYVVLAKG 230
>gi|256075409|ref|XP_002574012.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
gi|353229361|emb|CCD75532.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
Length = 212
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 131/217 (60%), Gaps = 7/217 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
++PY +NGGT + IAG D+ + A+DTR+ G + ILSR+ ++ KL ++ +GF D
Sbjct: 2 FNPYSSNGGTVMGIAGNDFSLIASDTRLCDGDFVILSRNSPRLFKLGPGNILGCAGFHGD 61
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V L KLL + +++ H K +S A+ LLS TLY +RFFP+Y NVL GLD EG+G
Sbjct: 62 VLTLTKLLENKVKTFRYDHGKNISTKALAGLLSVTLYNRRFFPFYVSNVLVGLD-EGRGV 120
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+Y+YD VGSYE GY + GS S ++ PFLD+ + + + ++ V+ L + AV L
Sbjct: 121 LYSYDPVGSYESEGYRASGSSSAILQPFLDSTVGNKT-----SKYHVSRLDKETAVKLTH 175
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERDI + + I + KDG+ LR+D
Sbjct: 176 DIFISAAERDIQCGDSVIICTITKDGLSEVSYPLRRD 212
>gi|170578154|ref|XP_001894290.1| proteasome subunit beta type 1 [Brugia malayi]
gi|158599186|gb|EDP36871.1| proteasome subunit beta type 1, putative [Brugia malayi]
Length = 258
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 130/224 (58%), Gaps = 7/224 (3%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMST-GYSILSRDYSKIIKLADKCVMASS 61
K+ W+PY GGT AIAG ++ + A+DTRMS ++L+RD KI L D V++ +
Sbjct: 39 KEASEWNPYSFEGGTTAAIAGDNFAIMASDTRMSQFEINVLTRDAEKIHVLNDSIVLSCA 98
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
GF D+ L++LL AR Y+ + M+ +LLS LYY+RFFPYY+ +L G+D
Sbjct: 99 GFYGDILQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDE 158
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE- 180
GKG V++YD +G E + Y++ GS +IMPF D Q+ L+ + D PL E
Sbjct: 159 NGKGAVFSYDPIGCIEHIAYTASGSAEPMIMPFFDCQIG----LVTMSGDVEKPLLTIER 214
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDG-IHREYMELRKD 223
A L+K F A ER+I T +K+ +V+ I + ++ LR+D
Sbjct: 215 ATSLIKDAFRVAAEREISTGDKIHLVIAEAGKPIRKMHLPLRED 258
>gi|402585903|gb|EJW79842.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 258
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 130/224 (58%), Gaps = 7/224 (3%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMST-GYSILSRDYSKIIKLADKCVMASS 61
K+ W+PY GGT AIAG ++ + A+DTRMS +IL+RD KI L D V++ +
Sbjct: 39 KEASEWNPYSFEGGTTAAIAGDNFAIMASDTRMSQFEINILTRDAEKIHVLNDSIVLSCA 98
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
GF D+ L++LL AR Y+ + M+ +LLS LYY+RFFPYY+ +L G+D
Sbjct: 99 GFYGDILQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDE 158
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSEAE 180
GKG V++YD +G E + Y++ GS +IMPF D Q+ L+ + D P L+
Sbjct: 159 NGKGAVFSYDPIGCIEHIAYTASGSAEPMIMPFFDCQIG----LVTMSGDVEKPHLTVER 214
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDG-IHREYMELRKD 223
A L+K F A ER+I T +K+ +V+ I + ++ LR+D
Sbjct: 215 ATSLIKDAFRVAAEREISTGDKIHLVIAEAGKPIRKMHLPLRED 258
>gi|324507472|gb|ADY43167.1| Proteasome subunit beta type-1 [Ascaris suum]
Length = 253
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 133/223 (59%), Gaps = 5/223 (2%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMST-GYSILSRDYSKIIKLADKCVMASS 61
K+ W+PY GG+ A+AG ++ + A+DTRMS +IL+RD KI L + ++A S
Sbjct: 34 KEAAFWNPYSFEGGSTAALAGDNFAIIASDTRMSQFEINILTRDAEKIHVLNNSIILACS 93
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
GF DV L++LL AR Y+ + M+ +LL+ LYY+RFFPYY+ ++L G+D
Sbjct: 94 GFYGDVLQLKRLLEARLHKYRFDYRGDMTVDLCAELLARNLYYRRFFPYYTGSILAGIDE 153
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181
+GKG V++YD +G ER+ Y++ GS +IMPFLD Q+ + L PL+ A
Sbjct: 154 DGKGAVFSYDPIGCIERLQYTASGSAEPMIMPFLDCQVGH---VTLTGDVEKPPLTIERA 210
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNK-DGIHREYMELRKD 223
L+K F + ER+I T +K+ +V+ + I + ++ LR+D
Sbjct: 211 TSLMKDAFRVSAEREICTGDKIHLVIAERGKPIRQMHLPLRED 253
>gi|68060726|ref|XP_672353.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489346|emb|CAI05284.1| hypothetical protein PB300285.00.0 [Plasmodium berghei]
Length = 237
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 134/232 (57%), Gaps = 30/232 (12%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T + + G +Y + A DTR+S YSI +R+ KI K+ DKC++ SSG Q+D+K L LL
Sbjct: 11 TGIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSLLQV 70
Query: 77 R---HLIYQH----------------------QHNKQMSCPAMGQLLSNTLYYKRFFPYY 111
L+Y + +H+ S + +LL TLY +RFFPYY
Sbjct: 71 LLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYY 130
Query: 112 SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 171
+FN+L G+D GKG +Y+YDA+GSY + ++ GSGS+LI+P LDN+++ + L+
Sbjct: 131 TFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRVEQKNQLIKNMD- 189
Query: 172 AVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ + ++ VK SATERDIYT +K EI +++ GI+ ++L++D
Sbjct: 190 ----FNLRDDINFVKDAMTSATERDIYTGDKAEIYIIDNLGINTTLLDLKQD 237
>gi|328849593|gb|EGF98770.1| hypothetical protein MELLADRAFT_73512 [Melampsora larici-populina
98AG31]
Length = 239
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 129/235 (54%), Gaps = 21/235 (8%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT +AI+ + V A DTR S GYSI SR K+ +L D+C +A +GF AD
Sbjct: 7 FNPYTDNGGTILAISSKSFAVIAGDTRQSEGYSIQSRYAPKVTQLTDQCCIAVNGFAADA 66
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
K L K + R + Y H H+ S ++ +L+ LY +RFFPYY++ +L G+D +G G V
Sbjct: 67 KELVKQIKQRLVWYNHTHSSMPSLQSIARLIQTMLYGRRFFPYYAYVILAGIDRDGTGAV 126
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ------LKSPSPLLLPAQD---------- 171
Y++D VGSYER + G+ +L+ PFLDNQ ++ P+ P +
Sbjct: 127 YSFDPVGSYERESCRAAGAAQSLVQPFLDNQVGGKNMIRDPNGPPAPVEPVYGKGESYTP 186
Query: 172 --AVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLN-KDGIHREYMELRKD 223
A PL EA LV F ATER I + LEI V+ G+ L++D
Sbjct: 187 PRADLPLERVEA--LVTDAFTGATERHIEVGDGLEIFVIEVGKGVRVIQKPLKRD 239
>gi|449295464|gb|EMC91486.1| hypothetical protein BAUCODRAFT_117991 [Baudoinia compniacensis
UAMH 10762]
Length = 265
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 137/236 (58%), Gaps = 17/236 (7%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLA--------DK 55
QH A+ PY +NGG+ + I+G + V A DTR ++GY+I +R K+ + K
Sbjct: 31 QH-AFYPYTDNGGSTLGISGKTFTVIAGDTRSTSGYNINTRYAPKLYPIGGQGPTHKGSK 89
Query: 56 CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV 115
V++ GF AD +ALQ+ L +Y++QH ++S A Q LS+ LY KRFFPYY +
Sbjct: 90 IVLSVVGFAADGRALQERLDTVVKMYRYQHGCEISVKACAQRLSHILYNKRFFPYYVQAI 149
Query: 116 LGGLDNE-GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPL--LL 167
LGG+D E G+G +Y+YD VGSYER + G+ ++LIMPFLDNQ+ P+ +
Sbjct: 150 LGGIDEETGEGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYEPAAVSGFD 209
Query: 168 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
Q PL + +LV+ F SA ER I + L+++ + K+GI Y L+KD
Sbjct: 210 KKQLVPQPLERPQVEELVRDAFTSAVERHIEVGDGLQMMFITKEGIEEVYFPLKKD 265
>gi|195173300|ref|XP_002027430.1| GL20944 [Drosophila persimilis]
gi|194113282|gb|EDW35325.1| GL20944 [Drosophila persimilis]
Length = 224
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 128/221 (57%), Gaps = 5/221 (2%)
Query: 8 WSP-----YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
W P Y+NNGGT +AIAG D+ V DTR+S+G +ILSR +K+ L+ + V+A++G
Sbjct: 2 WKPGKPDLYENNGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAATG 61
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
D +L LL + Y++QH+K MS +M Q+LS Y +R PY +LGG+D +
Sbjct: 62 CWCDAVSLTNLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQD 121
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
G+G V++YD +G + R +G+ ++ P LDNQ+ LL L++ A+
Sbjct: 122 GQGAVFSYDCIGHFVRESSRVEGTAVGILQPVLDNQIGYTKKDLLDETSEQPALTKERAL 181
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ K F +A + D++T + + I V+ KD I E M+L KD
Sbjct: 182 AIAKDAFITAAQSDVFTGDSVIINVITKDSIKVEKMQLGKD 222
>gi|268570354|ref|XP_002648488.1| C. briggsae CBR-PBS-6 protein [Caenorhabditis briggsae]
Length = 258
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 130/218 (59%), Gaps = 5/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
W+PY GG+ AI+G ++ + A+DTRM+ +IL+RD KI L D ++ +SGF D
Sbjct: 44 WNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIILTTSGFYGD 103
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V L+K+L +R Y+ + MS +LLS LYY+RFFPYY+ +L G+D GKG
Sbjct: 104 VIQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGA 163
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
V++YD +G ER+GYS+ G+ +I+PFLD Q+ + L L+ A+ L+K
Sbjct: 164 VFSYDPIGCIERLGYSASGAAEPMIIPFLDCQI---GHVTLAEGYERPQLTLERAISLMK 220
Query: 187 TCFASATERDIYTANKLEIVVLNKDG-IHREYMELRKD 223
F A ER+I T +K+ +V+ + ++++ LR+D
Sbjct: 221 DSFRGAAEREISTGDKIHLVIAEAGKPVVQKFLPLRED 258
>gi|390602798|gb|EIN12190.1| proteasome subunit [Punctularia strigosozonata HHB-11173 SS5]
Length = 276
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 123/231 (53%), Gaps = 22/231 (9%)
Query: 4 QHPA---WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
+HP ++PY +NGGT +AIAGAD+ V A DTR S GY+I +R K+ KL D+ V+A
Sbjct: 12 EHPQQRQFNPYSDNGGTILAIAGADFTVIAGDTRQSEGYNIQTRYAPKVFKLTDRAVLAV 71
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+GF AD K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++
Sbjct: 72 NGFAADGNMFVKKVKQRLEWYRHAHAKDMPLHAIARLIQTMLYARRFFPYYVYNILGGIE 131
Query: 121 NE-------------------GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 161
+ G G VY++D VGSYER + G+ L+ PFLDNQ+
Sbjct: 132 EDGTSAHSARPAFSSHFPTRTGSGAVYSFDPVGSYERETCRAAGAAQNLVQPFLDNQIYF 191
Query: 162 PSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDG 212
+ P L + + LV F ATER I + LE+ ++ G
Sbjct: 192 KNQQPAPGTSHPKHLPLPDVIKLVIDSFTGATERHIEVGDGLEMYIVLAKG 242
>gi|341897234|gb|EGT53169.1| CBN-PBS-6 protein [Caenorhabditis brenneri]
Length = 258
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 129/218 (59%), Gaps = 5/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
W+PY GG+ AIAG ++ + A+DTRM+ +IL+RD KI L D V+ +SGF D
Sbjct: 44 WNPYSMEGGSTCAIAGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIVLTTSGFYGD 103
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V L+K+L +R Y+ + MS +LL+ LYY+RFFPYY+ +L G+D GKG
Sbjct: 104 VIQLKKVLQSRLHKYRFDYRADMSVDLCAELLARNLYYRRFFPYYTGAILAGIDENGKGA 163
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
V++YD +G ER+ YS+ G+ +I+PFLD Q+ + L L+ A+ L+K
Sbjct: 164 VFSYDPIGCIERIAYSASGAAEPMIIPFLDCQI---GHVTLSEGYERPELTLERAISLMK 220
Query: 187 TCFASATERDIYTANKLEIVVLNKDG-IHREYMELRKD 223
F A ER+I T +K+ +V+ + ++++ LR+D
Sbjct: 221 DSFRGAAEREISTGDKIHLVIAEAGKPVVQKFLPLRED 258
>gi|345560620|gb|EGX43745.1| hypothetical protein AOL_s00215g481 [Arthrobotrys oligospora ATCC
24927]
Length = 266
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 121/213 (56%), Gaps = 7/213 (3%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
+QH WSPY NGG + IAG DY + A DTR S GYSI +R K+ + ++ G
Sbjct: 23 RQH-HWSPYTENGGCILGIAGKDYVIIAGDTRSSEGYSINTRTARKVYDIGSGLILGVVG 81
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
AD + L + +A + Y+ H+K ++ A +LS LY KRFFPYY +LGGLD E
Sbjct: 82 MSADGEELVRKVARKIDDYKRNHDKHITVAAAAVMLSRILYQKRFFPYYCQPLLGGLDEE 141
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LS 177
G G +Y+YD VGS+ER + G+ ++LI PFLDNQ+ + +P + P LS
Sbjct: 142 GVGAIYSYDYVGSFEREQSRAYGAAASLITPFLDNQINFKNQ-FVPGSNGEEPRPKVDLS 200
Query: 178 EAEAVDLVKTCFASATERDIYTANKLEIVVLNK 210
+ + +VK F SA ER I + L++V + K
Sbjct: 201 KEQVEKIVKDAFTSAVERHIEVGDGLQLVTIVK 233
>gi|17554384|ref|NP_498806.1| Protein PBS-6 [Caenorhabditis elegans]
gi|21903455|sp|P34286.2|PSB1_CAEEL RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome subunit beta 6
gi|12276021|gb|AAG50223.1|AF303265_1 proteasome component C5 [Caenorhabditis elegans]
gi|351020646|emb|CCD62635.1| Protein PBS-6 [Caenorhabditis elegans]
Length = 258
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 129/218 (59%), Gaps = 5/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
W+PY GG+ AI+G ++ + A+DTRM+ +IL+RD KI L D ++ +SGF D
Sbjct: 44 WNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGD 103
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V L+K+L +R Y+ + MS +LLS LYY+RFFPYY+ +L G+D GKG
Sbjct: 104 VLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGA 163
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
V++YD +G ER+GYS+ G+ +I+PFLD Q+ + L L+ A+ L+K
Sbjct: 164 VFSYDPIGCIERLGYSASGAAEPMIIPFLDCQI---GHVTLSEGYERPELTLDRAISLMK 220
Query: 187 TCFASATERDIYTANKLEIVVLNKDG-IHREYMELRKD 223
F A ER+I T +K+ +V+ + +++ LR+D
Sbjct: 221 DSFRGAAEREISTGDKIHLVIAEAGKPVVVKFLPLRED 258
>gi|71725697|gb|AAZ38994.1| proteasome-like protein [Oxyuranus scutellatus]
Length = 174
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 109/177 (61%), Gaps = 6/177 (3%)
Query: 48 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 107
K KL D V+ SGF D L +L AR +Y+H +NK MS A+ +LS LY +RF
Sbjct: 3 KCYKLTDTTVIGCSGFHGDCLTLTTILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRF 62
Query: 108 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 167
FPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ L
Sbjct: 63 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVG-----LK 117
Query: 168 PAQDAVT-PLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
Q A PLS +A+ LVK F SA ERD+YT + LE ++ KDGI E LR+D
Sbjct: 118 NMQGARQLPLSLEKALQLVKDVFISAAERDVYTGDALETCIITKDGIKEESFPLRRD 174
>gi|320582525|gb|EFW96742.1| Beta 6 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 226
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 120/198 (60%), Gaps = 6/198 (3%)
Query: 31 ADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS 90
DTR ++GYSI +R K+ + + ++ ++GF AD L K+ + Y HNK MS
Sbjct: 30 GDTRSTSGYSINTRYEPKVFDVGNNLLLTANGFAADSAQLIKVFKNQLEWYHFDHNKPMS 89
Query: 91 CPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTL 150
+ + + + LY KRFFPYY +LGGLD EGKG +Y++D VGSYER + G+ ++L
Sbjct: 90 TQSAARFIQHLLYGKRFFPYYVHTILGGLDEEGKGAIYSFDPVGSYEREQCRAGGAAASL 149
Query: 151 IMPFLDNQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTANKLEI 205
IMPFLDNQ+ + + PA D + LS E + LV+ F+SATER I + LEI
Sbjct: 150 IMPFLDNQVNFKNQ-MDPASDGKKRKPIRFLSLEEVIQLVRDAFSSATERHIQVGDGLEI 208
Query: 206 VVLNKDGIHREYMELRKD 223
+++ KDG+ EY L++D
Sbjct: 209 LIVTKDGVRTEYYPLKRD 226
>gi|296413676|ref|XP_002836535.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630362|emb|CAZ80726.1| unnamed protein product [Tuber melanosporum]
Length = 257
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 137/229 (59%), Gaps = 10/229 (4%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD--KCVMASS 61
QH +++PY +NGGT + I G D+ V A DTR ++GY+I SR K+ +L + V+A+
Sbjct: 30 QH-SFNPYTDNGGTIIGITGEDFVVLAGDTRHTSGYNINSRTEKKVYRLGEDNSLVLATV 88
Query: 62 GFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
GF AD K + + + ++ HN K MS A Q LS LY RFFP Y+ VL GLD
Sbjct: 89 GFGADSKDVAETMMRAVNDFKFNHNLKNMSVSAAAQYLSTFLYGNRFFPKYANCVLAGLD 148
Query: 121 NEGKGCVYTYDAVGSYERVG--YSSQGSGSTLIMPFLDNQLKSPSPLLLPA----QDAVT 174
+G+ +Y+YD+VGSY + G +S GS S+LI+PFLDNQ++ + + + + V
Sbjct: 149 KDGRARLYSYDSVGSYSKQGESRASAGSASSLIVPFLDNQVEFKNQFVPSSKGQEERPVV 208
Query: 175 PLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PL LVK F SATER I + L+I+ + KDG+ E ++L+KD
Sbjct: 209 PLDPVTVAKLVKDAFTSATERHIEVGDGLQIITVTKDGVSEEVVDLKKD 257
>gi|444728635|gb|ELW69084.1| Proteasome subunit beta type-1 [Tupaia chinensis]
Length = 283
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 133/268 (49%), Gaps = 66/268 (24%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+S+ +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+ A+ +LS LY +RFF KG V
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFF--------------XKGAV 135
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP----SPLLL--PAQDAV-------- 173
Y++D VGSY+R + + GS S ++ P LDNQL S PLLL P ++
Sbjct: 136 YSFDPVGSYQRDSFKAGGSASAMLQPLLDNQLNSDLHFGLPLLLTRPGLTSLICPVCFHM 195
Query: 174 --------------------------------------TPLSEAEAVDLVKTCFASATER 195
PLS A+ LVK F SA ER
Sbjct: 196 HITWSSSLLCLISITPPFTLPLLLSELVGFKNMQNVEHIPLSLDRAMRLVKDVFISAAER 255
Query: 196 DIYTANKLEIVVLNKDGIHREYMELRKD 223
D+YT + L I ++ K+G+ E + LR+D
Sbjct: 256 DVYTGDALRICIVTKEGVREETVPLRRD 283
>gi|308502323|ref|XP_003113346.1| CRE-PBS-6 protein [Caenorhabditis remanei]
gi|308265647|gb|EFP09600.1| CRE-PBS-6 protein [Caenorhabditis remanei]
Length = 258
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 129/218 (59%), Gaps = 5/218 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
W+PY GG+ AI+G ++ + A+DTRM+ +IL+RD KI L D ++ +SGF D
Sbjct: 44 WNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIILTTSGFYGD 103
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V L+K+L +R Y+ + MS +LLS LYY+RFFPYY+ +L G+D GKG
Sbjct: 104 VLQLKKVLQSRLHKYRFDYRADMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGA 163
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
V++YD +G ER+ YS+ G+ +I+PFLD Q+ + L L+ A+ L+K
Sbjct: 164 VFSYDPIGCIERLTYSASGAAEPMIIPFLDCQI---GHVTLAEGYERPQLTLERAISLMK 220
Query: 187 TCFASATERDIYTANKLEIVVLNKDG-IHREYMELRKD 223
F A ER+I T +K+ +V+ + ++++ LR+D
Sbjct: 221 DSFRGAAEREISTGDKIHLVIAETGKPVVQKFLPLRED 258
>gi|198463833|ref|XP_002135596.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
gi|198151431|gb|EDY74223.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 129/221 (58%), Gaps = 13/221 (5%)
Query: 8 WSP-----YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
W P Y+NNGGT +AIAG D+ V DTR+S+G +ILSR +K+ L+ + V+A++G
Sbjct: 2 WKPGKADLYENNGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAATG 61
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
D +L LL + Y++QH+K MS +M Q+LS Y +R PY +LGG+D +
Sbjct: 62 CGCDAVSLTNLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQD 121
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
G+G V++YD +G + R +G+ ++ P LDNQ+ S PA L++ A+
Sbjct: 122 GQGAVFSYDCIGHFVRESSRVEGTAVGILQPVLDNQIGETSE--QPA------LTKERAL 173
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ K F +A + D++T + + I V+ KD I E M+L KD
Sbjct: 174 AIAKDAFITAAQSDMFTGDSVIINVITKDSIKVEKMQLGKD 214
>gi|119567808|gb|EAW47423.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_d [Homo sapiens]
Length = 205
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 108/171 (63%), Gaps = 6/171 (3%)
Query: 54 DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
DK V+ SGF D L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +
Sbjct: 40 DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 99
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 173
N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + Q+
Sbjct: 100 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 154
Query: 174 -TPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS A+ LVK F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 155 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 205
>gi|395738001|ref|XP_003777017.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pongo abelii]
Length = 205
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 108/171 (63%), Gaps = 6/171 (3%)
Query: 54 DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
DK V+ SGF D L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +
Sbjct: 40 DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 99
Query: 114 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 173
N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + Q+
Sbjct: 100 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 154
Query: 174 -TPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
PLS A+ LVK F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 155 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 205
>gi|190408868|gb|EDV12133.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
Length = 242
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 124/224 (55%), Gaps = 10/224 (4%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD- 66
++PY +NGGT + IAG D+ V A DTR T YSI SR K+ D VM+++GF AD
Sbjct: 21 FNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADG 80
Query: 67 ---VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
VK + + H Q Q C S T + FFPYY ++ GLD +G
Sbjct: 81 DALVKRFKNSVKWYHFGPQRQKIIYKLCSKEYSTSSGTG--RGFFPYYVHTIIAGLDEDG 138
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSEA 179
KG VY++D VGSYER + G+ ++LIMPFLDNQ+ + V LS
Sbjct: 139 KGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVE 198
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
E + LV+ F SATER I + LEI+++ KDG+ +E+ EL++D
Sbjct: 199 EVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 242
>gi|302688009|ref|XP_003033684.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
gi|300107379|gb|EFI98781.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
Length = 274
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 127/235 (54%), Gaps = 24/235 (10%)
Query: 1 MTKQHP---AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCV 57
+T HP +++PY +NGGT +AIAG+D+ V A DTR S GY+I +R K+ +L +K V
Sbjct: 5 VTLGHPTQHSFNPYTDNGGTVLAIAGSDFSVIAGDTRQSEGYNIQTRYAPKVHRLTNKAV 64
Query: 58 MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLG 117
+A +GF AD K L R Y H H K M A+ +L+ LY +RFFP+Y + +LG
Sbjct: 65 LAVTGFAADGNTFVKKLKQRLEWYHHAHAKNMPLQAVARLIQTMLYGRRFFPFYVYIILG 124
Query: 118 GLDNE--------------------GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 157
G++ + G G VY++D VGSYER + G+ +L+ PFLDN
Sbjct: 125 GIEEDGTRHRSSRSHTHRPTFFLFPGSGSVYSFDPVGSYERETCRAAGAAQSLLQPFLDN 184
Query: 158 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEI-VVLNKD 211
Q+ + + P L + LV F SATER I + LE+ +V+ KD
Sbjct: 185 QIYFKNQIPQPGTTHPAHLPLPHVLSLVIDSFTSATERHIEVGDGLEVYIVVAKD 239
>gi|56758256|gb|AAW27268.1| SJCHGC09410 protein [Schistosoma japonicum]
gi|226489270|emb|CAX75779.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489272|emb|CAX75780.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489274|emb|CAX75781.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 130/217 (59%), Gaps = 7/217 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
++PY +NGGT + I+G D+ + A+DTR+ G + ILSR+ ++ KL V+ +GF D
Sbjct: 2 FNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGRGNVLGCAGFHGD 61
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V L KLL + Y++ H K +S A+ LLS +LY +RFFP+Y N+L GLD + +G
Sbjct: 62 VLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD-RGV 120
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+Y+YD VGSYE GY + GS + ++ PFLD+ + + + ++ V+ L++ AV L
Sbjct: 121 LYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNKT-----SKYHVSRLNKETAVKLTH 175
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD + + I + KDG+ LR+D
Sbjct: 176 DIFISAAERDTQCGDGVVIYTVTKDGLSETSYPLRRD 212
>gi|440293947|gb|ELP86994.1| proteasome subunit beta type 1, putative, partial [Entamoeba
invadens IP1]
Length = 173
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 116/180 (64%), Gaps = 12/180 (6%)
Query: 41 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 100
IL+R+ +KI +L+ KC+ +SG +AD+ L L A+ Y++++NK+MS A+ QLLSN
Sbjct: 1 ILTRNSTKIYQLSSKCIFTASGMRADMNELTDQLKAQIKNYRYENNKEMSTEAIAQLLSN 60
Query: 101 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 160
TLY RFFPYYSF++L GL +G+ +Y YDAVGS++ V Y+ GSG L P LD LK
Sbjct: 61 TLYSHRFFPYYSFSILTGLSVKGEPLIYNYDAVGSFQEVAYTCSGSGEELAYPLLDALLK 120
Query: 161 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGI--HREYM 218
+ +LL E E V++ + SA ERDI+T + +E+ VLNK+GI +EYM
Sbjct: 121 QRTEVLL----------EKEGVNIARDVMTSACERDIHTGDDVELYVLNKNGITYTKEYM 170
>gi|226471340|emb|CAX70751.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 130/217 (59%), Gaps = 7/217 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
++PY +NGGT + I+G D+ + A+DTR+ G + ILSR+ ++ KL V+ +GF D
Sbjct: 2 FNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGRGNVLGYAGFHGD 61
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V L KLL + Y++ H K +S A+ LLS +LY +RFFP+Y N+L GLD + +G
Sbjct: 62 VLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD-RGV 120
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+Y+YD VGSYE GY + GS + ++ PFLD+ + + + ++ V+ L++ AV L
Sbjct: 121 LYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNKT-----SKYHVSRLNKETAVKLTH 175
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD + + I + KDG+ LR+D
Sbjct: 176 DIFISAAERDTQCGDGVVIYTVTKDGLSETSYPLRRD 212
>gi|83314992|ref|XP_730601.1| proteasome subunit beta type 1 [Plasmodium yoelii yoelii 17XNL]
gi|23490372|gb|EAA22166.1| proteasome subunit beta type 1-related [Plasmodium yoelii yoelii]
Length = 214
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 33/216 (15%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
W+PY +NGG C KI K+ DKC++ SSG Q+D+
Sbjct: 32 WNPYIDNGGNC----------------------------PKISKITDKCIIGSSGMQSDI 63
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
K L LL + ++ +H+ S + +LL TLY +RFFPYY+FN+L G+D +GKG +
Sbjct: 64 KTLHSLLQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDEDGKGVL 123
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YDA+GSY ++ GSGS+LI+P LDN+++ + L+ + + ++ VK
Sbjct: 124 YSYDAIGSYYMSTHACTGSGSSLILPILDNRVEQKNQLI-----KNIDFNLRDDINFVKD 178
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SATERDIYT ++ EI +++ GI+ ++L+KD
Sbjct: 179 AMTSATERDIYTGDQAEIYIIDNLGINTTLLDLKKD 214
>gi|238578402|ref|XP_002388706.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
gi|215450229|gb|EEB89636.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
Length = 165
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 99/155 (63%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
Q ++PY NGGT +AI GA++ V A DTR S GYSI +R K+ +L DK V+A +GF
Sbjct: 11 QQRQFNPYSENGGTILAIGGANFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGF 70
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD K + R Y+H H K M A+ +L+ LY +RFFPYY +N+LGG++ +G
Sbjct: 71 AADGNMFVKKVRQRLEWYRHAHAKDMPLRAIARLIQTMLYARRFFPYYVYNILGGIEEDG 130
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 158
G VY++D VGSYER + G+ +L+ PFLDNQ
Sbjct: 131 SGAVYSFDPVGSYERESCRAAGAAQSLVQPFLDNQ 165
>gi|19115641|ref|NP_594729.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe 972h-]
gi|17380232|sp|Q9UQY2.1|PSB6_SCHPO RecName: Full=Probable proteasome subunit beta type-6
gi|5734483|emb|CAB52716.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe]
gi|6681370|dbj|BAA88692.1| catalytic subunit (C5) of proteasome [Schizosaccharomyces pombe]
Length = 225
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 122/228 (53%), Gaps = 20/228 (8%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY NGGT VAIAG + + A DTR GY+I +R ++ ++ D V+ +SGF+AD
Sbjct: 6 FDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADA 65
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
AL K + R +Y H ++MS + ++ LY KRFFPYY + + G+D EGKG +
Sbjct: 66 LALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEI 125
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL------------KSPSPLLLPAQDAVTP 175
Y++D VGSYER + GS + I PFLDNQ+ K P L
Sbjct: 126 YSFDPVGSYEREWCRAGGSAANFITPFLDNQVNLHNQYVPGSHGKERKPRRL-------- 177
Query: 176 LSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L EA+ + F SA ER I + + + ++ K+G+ + L+KD
Sbjct: 178 LKLEEAMKITTDAFTSAGERHIEVGDSVLVKIITKEGVETRIIPLKKD 225
>gi|226489268|emb|CAX75778.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 129/217 (59%), Gaps = 7/217 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
++ Y +NGGT + I+G D+ + A+DTR+ G + ILSR+ ++ KL V+ +GF D
Sbjct: 2 FNLYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGRGNVLGCAGFHGD 61
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V L KLL + Y++ H K +S A+ LLS +LY +RFFP+Y N+L GLD + +G
Sbjct: 62 VLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD-RGV 120
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+Y+YD VGSYE GY + GS + ++ PFLD+ + + + ++ V+ L++ AV L
Sbjct: 121 LYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNKT-----SKYHVSRLNKETAVKLTH 175
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD + + I + KDG+ LR+D
Sbjct: 176 DIFISAAERDTQCGDGVVIYTVTKDGLSETSYPLRRD 212
>gi|403171610|ref|XP_003330811.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169259|gb|EFP86392.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 255
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 125/228 (54%), Gaps = 17/228 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
+NGGT +AI+ ++ V A DTR S GYSI +R K+ +L ++C +A +GF AD K L K
Sbjct: 28 DNGGTILAISSKEFAVIAGDTRQSEGYSIQTRYAPKVTQLTEECCIAVNGFAADGKELVK 87
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
L R YQH H Q S ++ +L+ LY +RFFPYY++ +L G+D +G G VY++D
Sbjct: 88 QLKQRLQWYQHTHASQPSVQSIARLVQTMLYGRRFFPYYAYVILAGIDRDGTGAVYSFDP 147
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPS-------------PLLLPAQDAVTPLSE- 178
VGSYER + G+ +L+ PFLDNQ+ + P+ Q P S+
Sbjct: 148 VGSYERESCRAAGAAQSLVQPFLDNQVGGKNMTRDPSGPAPPPEPVYAQGQSYTPPRSQL 207
Query: 179 -AEAVD-LVKTCFASATERDIYTANKLEIVVLNK-DGIHREYMELRKD 223
E V LV F A ER I + LEI ++ G+ EL++D
Sbjct: 208 PLEKVQALVTDAFTGAAERHIEVGDGLEIFIIEAGKGVRVVRKELKRD 255
>gi|311334476|emb|CBN08619.1| proteasome (prosome, macropain) subunit, beta type 1 [Microcosmus
squamiger]
Length = 181
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 114/186 (61%), Gaps = 6/186 (3%)
Query: 39 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 98
+SI SR+ K ++L V+ ++GF D L+K+L R +Y H+H K+ S A+ +L
Sbjct: 1 FSIHSRNEPKTMQLTSNGVLGAAGFHGDALTLRKVLKYRIKMYVHEHGKEPSVCAIAAML 60
Query: 99 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 158
S LYYKRFFPYY +N+L G+D EGKGCV++YD VG YER Y ++GS + L+ P LDNQ
Sbjct: 61 STILYYKRFFPYYVYNLLAGIDEEGKGCVFSYDPVGCYEREAYRAEGSAAELLQPLLDNQ 120
Query: 159 LKSPSPLLLPAQDA-VTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREY 217
+ + ++A L++ A+ LVK F SA ERDI T + + I V++ G+
Sbjct: 121 IGYKN-----MENANREALTKERALQLVKDVFISAAERDITTGDGVLIHVIDGRGVQTHE 175
Query: 218 MELRKD 223
LR+D
Sbjct: 176 FPLRRD 181
>gi|291230976|ref|XP_002735446.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 180
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 98/146 (67%), Gaps = 8/146 (5%)
Query: 80 IYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 139
+Y++ H+K+MSCPA+ ++S LYY+RFFPYY +N++ GLD EGKGCVY+YD VGSYER
Sbjct: 41 MYKNDHHKEMSCPAIAAMISTILYYRRFFPYYVYNIVAGLDTEGKGCVYSYDPVGSYERE 100
Query: 140 GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDI 197
Y S GS S ++ P LDNQ+ Q+ V LS +AV+L K F SA ERDI
Sbjct: 101 SYRSAGSASAMLQPLLDNQIG------FKNQEGVEQVALSRDKAVNLAKDVFISAAERDI 154
Query: 198 YTANKLEIVVLNKDGIHREYMELRKD 223
YT + + I V++K+GI + LR+D
Sbjct: 155 YTGDSIIINVIDKNGITSDSFPLRRD 180
>gi|330038504|ref|XP_003239615.1| 26S proteasome SU B6 [Cryptomonas paramecium]
gi|327206539|gb|AEA38717.1| 26S proteasome SU B6 [Cryptomonas paramecium]
Length = 245
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 124/221 (56%), Gaps = 4/221 (1%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
+ K+ ++PY NN GT ++IA +YCV +DTR G+SI +R ++I K+++K ++AS
Sbjct: 27 VNKKKKNFNPYQNNSGTIISIANQNYCVVVSDTRYLNGFSIPTRFQTRIFKISEKIILAS 86
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+G AD QK Y++ K +S + +S+ LY KRFFPYY FNVL GLD
Sbjct: 87 AGMFADAFFFQKKTKTSIKDYEYGIKKAISVESCAFYISSLLYSKRFFPYYVFNVLSGLD 146
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
KG VY++D+VGS+E++ ++ G I P LD+ + L + + S +
Sbjct: 147 ENDKGSVYSFDSVGSFEKLKFNCIGESCAAIQPLLDSYFEHQ----LKLKFNLRTKSIQD 202
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELR 221
++ +K F A++R I + L+ ++NK GI E LR
Sbjct: 203 LINSIKEFFLKASKRKIDIGDGLQFFIINKKGIINENYLLR 243
>gi|401887735|gb|EJT51714.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
asahii CBS 2479]
Length = 251
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 3/186 (1%)
Query: 28 VTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNK 87
V A DTR S GY+I +R K+ +L DK V+A++GF AD K + R Y+ H+K
Sbjct: 22 VIAGDTRQSQGYNIQTRYAKKVFQLTDKVVLATNGFAADGNNFYKRVKQRLEWYEANHHK 81
Query: 88 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 147
QMS ++ +++ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+
Sbjct: 82 QMSIKSIARMIQTMLYGRRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAA 141
Query: 148 STLIMPFLDNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTANKLEI 205
+LI PFLDNQ+ + P P L + +V F SATER I + LE+
Sbjct: 142 QSLIQPFLDNQIYFRNQTFPPGVPRPIPGNLPLGTVISIVLDSFTSATERHIEVGDSLEM 201
Query: 206 -VVLNK 210
+V+NK
Sbjct: 202 YIVMNK 207
>gi|406699677|gb|EKD02876.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
asahii CBS 8904]
Length = 251
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 110/186 (59%), Gaps = 3/186 (1%)
Query: 28 VTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNK 87
V A DTR S GY+I +R K+ +L DK V+A++GF AD K + R Y+ H+K
Sbjct: 22 VIAGDTRQSQGYNIQTRYAKKVFQLTDKVVLATNGFAADGNNFYKRVKQRLEWYEANHHK 81
Query: 88 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 147
QMS ++ +++ LY +RFFPYY +N+LGG++ +G G +Y++D VGSYER + G+
Sbjct: 82 QMSIKSIARMIQTMLYGRRFFPYYVYNILGGIEEDGTGAIYSFDPVGSYEREACRAAGAA 141
Query: 148 STLIMPFLDNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTANKLEI 205
+LI PFLDNQ+ + P P L + +V F SATER I + LE+
Sbjct: 142 QSLIQPFLDNQIYFKNQTFPPGVPRPIPGNLPLGTVISIVLDSFTSATERHIEVGDSLEM 201
Query: 206 -VVLNK 210
+V+NK
Sbjct: 202 YIVMNK 207
>gi|340507845|gb|EGR33723.1| proteasome subunit beta type 1, putative [Ichthyophthirius
multifiliis]
Length = 203
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 102/168 (60%), Gaps = 15/168 (8%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
+ P ++PY N GT AI G + + A DTR+S GYSI+SR+ SK+ KL+D +A+SG
Sbjct: 31 KKPQFNPYVFNAGTVCAIGGKGFVIVAGDTRLSQGYSIISRENSKLCKLSDNVYLATSGM 90
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYK---------------RFF 108
AD AL K L +R +YQ+ + KQ S A+ LLS TLYYK RFF
Sbjct: 91 YADFVALSKQLQSRLQMYQYNNQKQASMKAISTLLSRTLYYKRYIYFIINFINKYIYRFF 150
Query: 109 PYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 156
PYY+FN+L G DN+G G V YDAVGS + Y+ GSG+ LI+P D
Sbjct: 151 PYYTFNLLAGFDNQGNGQVIGYDAVGSGDFKQYAVLGSGAQLIVPIFD 198
>gi|67526071|ref|XP_661097.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
gi|40739864|gb|EAA59054.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
gi|259481995|tpe|CBF76042.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 215
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 127/220 (57%), Gaps = 15/220 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLAD----KCVMASSGF 63
+ PY +NGG + ++G D+ + A DTR + GY+I +R K+ + D V++ GF
Sbjct: 7 FYPYTSNGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTIQDARDRSIVISVIGF 66
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
AD +AL++ L A +Y++QH K + A Q +S LY KRFFPY ++ G+D +G
Sbjct: 67 AADGRALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDADG 126
Query: 124 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
+G +Y YD G E+ + + G S+L++PFLD+Q +P L PLS A
Sbjct: 127 QGAIYYYDPAGCIEKRSHCAAGEASSLMLPFLDSQ----APRL-------QPLSLQTAQQ 175
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LV+ + ATER I + L+++V+ ++G+ + ++L+KD
Sbjct: 176 LVRDAYTGATERHIEVGDHLQMLVVTREGVSEQLVDLKKD 215
>gi|342319050|gb|EGU11002.1| Proteasome subunit beta type [Rhodotorula glutinis ATCC 204091]
Length = 289
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 118/217 (54%), Gaps = 11/217 (5%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P +NGG+ +AI+ + + V A DTR S+GY+I +R ++ +L + +A GF D
Sbjct: 17 PLFDNGGSILAISSSKFAVIAGDTRQSSGYNIETRTAKRVFQLTPEAAIAVQGFMGDAMN 76
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
L K L R Y H HN+ S ++ +L+ LY KRFFPYYS+ +L G+D +G G VY+
Sbjct: 77 LVKRLKQRLEWYHHTHNEVPSLKSIARLVQTMLYGKRFFPYYSYVILAGIDRDGTGAVYS 136
Query: 130 YDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT-----PLSEAEAVDL 184
+D VGSYER + GS +L+ PFLDN + + + P+ AE L
Sbjct: 137 FDPVGSYERESCRAYGSAQSLVQPFLDNMVYKKNQVPDPSLPPPVPGQRPEFDLAEVQSL 196
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELR 221
+ F A ER I + L+++V+ KD ME+R
Sbjct: 197 LTDAFTGAAERHIEVGDGLDVLVVEKD------MEMR 227
>gi|387592573|gb|EIJ87597.1| hypothetical protein NEQG_02144 [Nematocida parisii ERTm3]
gi|387595200|gb|EIJ92825.1| hypothetical protein NEPG_02224 [Nematocida parisii ERTm1]
Length = 242
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 2/213 (0%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y +N GT ++I GAD+CV A+DTR S Y+I +R +K L + +++++GF AD + +
Sbjct: 32 YGDNSGTSLSIIGADFCVVASDTRHSAPYNINTRHATKSFCLDGRFILSTTGFYADSRFV 91
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
LA + YQ ++NK+M LL LY RFFP +++ L G + E K +++Y
Sbjct: 92 YTELAYQIDKYQFKYNKKMGIEQAAALLHVLLYKHRFFPKFTYCCLVGFNEEEKPKIFSY 151
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
D VGSY+ GSG+T++ P LD+ + + +D V +E E + LVK F
Sbjct: 152 DPVGSYQETPCRCNGSGTTMLQPMLDSWITRKNWHCEEGKDYV--CTEEEVISLVKDVFN 209
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
S E D+ T + LE+ V+ KDGI RE LR D
Sbjct: 210 SVAETDVKTGDGLEVYVIKKDGITREEYPLRSD 242
>gi|402466187|gb|EJW01728.1| hypothetical protein EDEG_03753 [Edhazardia aedis USNM 41457]
Length = 225
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 130/226 (57%), Gaps = 10/226 (4%)
Query: 2 TKQHPA--WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMA 59
T QH + PY+ N GT +AI DY + A DTR S+ I +R+ SKI L D +
Sbjct: 6 TIQHQGRRFDPYEFNAGTSLAINMNDYLILATDTRHSSEMGINTRNISKIYFL-DDLYLI 64
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
+GF AD + L + + Y+ ++NK+M + LL N LY KRFFPYYS+ +LGG
Sbjct: 65 VTGFYADGYEVYINLLYQLIEYESKNNKKMGIRSAAHLLHNLLYRKRFFPYYSYCILGGF 124
Query: 120 DNEG-KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 178
D + K ++++D VGSY GSG+T+I P LD+++ L ++ T +++
Sbjct: 125 DKKSQKFLLFSFDVVGSYGETVCRVDGSGTTMIQPLLDSRISK-----LNWENNDTKVTD 179
Query: 179 AEAV-DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ V +LVK F SA ERD+ T + L++VV+ KDGI R +LR D
Sbjct: 180 CKEVCELVKIAFKSAAERDVKTGDYLDLVVVKKDGIERTLHKLRHD 225
>gi|225712140|gb|ACO11916.1| Proteasome subunit beta type-1-A [Lepeophtheirus salmonis]
Length = 238
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 127/217 (58%), Gaps = 7/217 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY++N GT +AI+ ++ + A+D R S+ ++I SR+ SKI KL + +++GF D+
Sbjct: 28 FGPYESNSGTTLAISTPEFNIFASDIRNSSSFTIHSRNCSKIFKLKNSITFSATGFFGDI 87
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+ ++L + ++ Q K+M + L N LY KRFFP+Y F VLGG++N G+ +
Sbjct: 88 YRVFEILKHKQELFYQQFEKEMLVSELAHFLMNVLYSKRFFPFYGFIVLGGIEN-GECAM 146
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YD VGSY++ G+G ++ P LD+++ + L + + + +VK
Sbjct: 147 YSYDPVGSYQKDTARCYGTGMKIVQPILDSKIYRKNNLKKEEEFKEEEI-----IAIVKK 201
Query: 188 CFASATERDIYTANKLEIVVLNKDG-IHREYMELRKD 223
F S +ERD+ T + +EIV++ KDG ++LR+D
Sbjct: 202 AFESVSERDVKTGDGVEIVIIRKDGSTDSNIIKLRRD 238
>gi|197129777|gb|ACH46275.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 149
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 87/125 (69%)
Query: 4 QHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGF 63
QH +SPY NGGT +AIAG D+C+ A+DTR+S GYSI SRD K KL ++ V+ +GF
Sbjct: 23 QHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGF 82
Query: 64 QADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
D L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG
Sbjct: 83 HGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 142
Query: 124 KGCVY 128
KG VY
Sbjct: 143 KGAVY 147
>gi|219114683|ref|XP_002176500.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402501|gb|EEC42514.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 130
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 94/135 (69%), Gaps = 5/135 (3%)
Query: 89 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 148
MS P++ Q+LSNTLYYKRFFPYY+FNV+GG+D +GKG VY+YDA+GS+ER YS+ GSG
Sbjct: 1 MSTPSIAQMLSNTLYYKRFFPYYAFNVMGGVDAQGKGAVYSYDAIGSFERSTYSANGSGQ 60
Query: 149 TLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVL 208
I+P LDN + + + L P L+ E V+++K F SA ERDIYT +++EI V+
Sbjct: 61 AYIIPLLDNVIGNRNRLDEPPN-----LTAEEVVEILKDAFLSAGERDIYTGDQVEICVV 115
Query: 209 NKDGIHREYMELRKD 223
D + ++ L+ D
Sbjct: 116 RADSVTTQHFALKAD 130
>gi|149549948|ref|XP_001513174.1| PREDICTED: proteasome subunit beta type-1-like, partial
[Ornithorhynchus anatinus]
Length = 261
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 94/141 (66%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T +AIAG D+ + A+DTR+S GYSI SRD K KL D+ V+ SGF D L K++ A
Sbjct: 1 TVLAIAGEDFSIVASDTRLSEGYSIHSRDNPKCYKLTDRTVIGCSGFHGDCLTLTKIIEA 60
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG VY+ + +GSY
Sbjct: 61 RLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSLNPIGSY 120
Query: 137 ERVGYSSQGSGSTLIMPFLDN 157
+ Y + G+ +T++ P N
Sbjct: 121 LKDNYKAGGTTNTMLQPLTAN 141
>gi|195439248|ref|XP_002067543.1| GK16137 [Drosophila willistoni]
gi|194163628|gb|EDW78529.1| GK16137 [Drosophila willistoni]
Length = 229
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 123/218 (56%), Gaps = 11/218 (5%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRM-STGYSILSRDYSKIIKLADKCVMASSGFQA 65
++ PY NGG+ VAIAG D+ A DTRM + +I+SR SK+ +L + S G A
Sbjct: 22 SFDPYVCNGGSIVAIAGEDFVTIAGDTRMVNEDDAIVSRSQSKLFQLTPMTAIGSVGCFA 81
Query: 66 DVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
D A+ ++ +YQ H K++S A+ Q+LS ++Y RFFPY+ N++ G+D GKG
Sbjct: 82 DTLAVVNVIKQNIHMYQLTHLKRISTDALAQMLSISMYSHRFFPYFVSNIVAGIDRNGKG 141
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
V++YD +G +ER Y + G+G L++P +D +K+ PL+ A ++
Sbjct: 142 AVFSYDPIGHHERKAYDAAGTGFELMIPAMDYFIKNLK----------EPLTIEIAAEIT 191
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ A +D+YT + + ++ K+G+ + M LRKD
Sbjct: 192 RKVMIVADNKDVYTGDSAIMYIITKNGVEAKKMPLRKD 229
>gi|10121721|gb|AAG13340.1|AF266220_1 proteasome subunit beta type 1 [Gillichthys mirabilis]
Length = 181
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +A+AG D+ + A+DTR+S GYSI SRD K KL D V+ SGF D
Sbjct: 14 FSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDC 73
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K++ AR +Y+H +NK M+C A+ +LS LY +RFFPYY +N++GGLD EGKG
Sbjct: 74 LTLTKIIDARLKMYKHSNNKMMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKG-A 132
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 161
T VGSY+R + S ++ P LD +L S
Sbjct: 133 STALPVGSYQRDPTGWKIS-HCMLPPLLDTRLVS 165
>gi|344249385|gb|EGW05489.1| Proteasome subunit beta type-1 [Cricetulus griseus]
Length = 140
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 94/145 (64%), Gaps = 6/145 (4%)
Query: 80 IYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 139
+Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R
Sbjct: 1 MYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRD 60
Query: 140 GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIY 198
+ + GS S ++ P LDNQ+ + Q+ PLS A+ LVK F SA ERD+Y
Sbjct: 61 SFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVY 115
Query: 199 TANKLEIVVLNKDGIHREYMELRKD 223
T + L I ++ K+GI E + LRKD
Sbjct: 116 TGDALRICIVTKEGIREETVPLRKD 140
>gi|149047100|gb|EDL99820.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
[Rattus norvegicus]
gi|149047101|gb|EDL99821.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
[Rattus norvegicus]
Length = 140
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 94/145 (64%), Gaps = 6/145 (4%)
Query: 80 IYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 139
+Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R
Sbjct: 1 MYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRD 60
Query: 140 GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIY 198
+ + GS S ++ P LDNQ+ + Q+ PL+ A+ LVK F SA ERD+Y
Sbjct: 61 SFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLTLDRAMRLVKDVFISAAERDVY 115
Query: 199 TANKLEIVVLNKDGIHREYMELRKD 223
T + L I ++ K+GI E + LRKD
Sbjct: 116 TGDALRICIVTKEGIREETVPLRKD 140
>gi|213401303|ref|XP_002171424.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
gi|211999471|gb|EEB05131.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
Length = 193
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 109/187 (58%), Gaps = 6/187 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY NGGT V IAG D+ + A DTR GY+I +R ++ ++ DK ++ ++GF+AD
Sbjct: 6 FDPYVQNGGTIVGIAGEDFSIIAGDTRNVNGYNINTRFSPRVHEVGDKLILGATGFEADA 65
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L K + R +Y H + MS + +++ LY KRFFPYY + ++ GLD +G G +
Sbjct: 66 LTLVKRIRQRIDLYHDNHKRIMSPSSCSRMVQTMLYGKRFFPYYVYTLVAGLDEKGVGAL 125
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-----LSEAEAV 182
Y++D VGSYER + GS + ++ FLDNQ+ + +P + L+ +AV
Sbjct: 126 YSFDPVGSYEREWCRAAGSAANFMLSFLDNQVNLHNQ-YVPTSNGTEKMPHRLLTLTQAV 184
Query: 183 DLVKTCF 189
+L++ CF
Sbjct: 185 NLLQDCF 191
>gi|323334738|gb|EGA76111.1| Pre7p [Saccharomyces cerevisiae AWRI796]
Length = 184
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 104/181 (57%), Gaps = 5/181 (2%)
Query: 48 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKR 106
+ D VM+++GF AD AL K Y HN K++S + + + + LY KR
Sbjct: 4 RFFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKR 63
Query: 107 FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL 166
FFPYY ++ GLD +GKG VY++D VGSYER + G+ ++LIMPFLDNQ+ +
Sbjct: 64 FFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYE 123
Query: 167 LPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRK 222
V LS E + LV+ F SATER I + LEI+++ KDG+ +E+ EL++
Sbjct: 124 PGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKR 183
Query: 223 D 223
D
Sbjct: 184 D 184
>gi|160331789|ref|XP_001712601.1| prsB6 [Hemiselmis andersenii]
gi|159766050|gb|ABW98276.1| prsB6 [Hemiselmis andersenii]
Length = 251
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 127/223 (56%), Gaps = 5/223 (2%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMAS 60
+ K++ ++ Y NNGGT + I+ ++ + A+DTR S G ++ +R ++IIK++ ++AS
Sbjct: 34 ILKKNSDFNFYQNNGGTVLGISTKNFSLIASDTRFSFGMALPTRTTTRIIKISSNIILAS 93
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+G +D+ LQ L+ ++ ++ ++ + LS LY KRFFPYYSFN+L GL+
Sbjct: 94 AGMYSDIFFLQNLIQIGIKKFKTENLEKCLISSCAFYLSYILYSKRFFPYYSFNLLAGLE 153
Query: 121 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 180
+G ++ +DA+GS+E+ S G+G + I P LD + S LL +D T LS
Sbjct: 154 KNREGSIFCFDAIGSFEKTSISCVGNGQSQIQPILDGIFQKKS--LLVKKDFQTLLS--- 208
Query: 181 AVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ +K F +R+I + L++ ++ K GI E L+ D
Sbjct: 209 VKNCIKGIFLKVAQRNISIGDGLQMFIVTKKGIFIENHFLKLD 251
>gi|226471338|emb|CAX70750.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 178
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 111/178 (62%), Gaps = 7/178 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
++PY +NGGT + I+G D+ + A+DTR+ G + ILSR+ ++ KL V+ +GF D
Sbjct: 2 FNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGCGNVLGCAGFHGD 61
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 126
V L KLL + Y++ H K +S A+ LLS +LY +RFFP+Y N+L GLD + +G
Sbjct: 62 VLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD-RGV 120
Query: 127 VYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDL 184
+Y+YD VGSYE GY + GS + ++ PFLD+ + + P + V+ L++ AV L
Sbjct: 121 LYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNK-----PPKYHVSRLNKEAAVKL 173
>gi|401827105|ref|XP_003887645.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
gi|392998651|gb|AFM98664.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
Length = 290
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 123/221 (55%), Gaps = 8/221 (3%)
Query: 3 KQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSG 62
K ++PY++N GT V + D+ V + DTR S+ I SR+ SKI ++ + + +G
Sbjct: 78 KDGERFNPYEDNSGTVVCLKQDDFVVVSGDTRHSSEMVINSREMSKIFRIGN-FFLTGTG 136
Query: 63 FQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE 122
F AD + + + + I Q++ + ++ + LLS LY +RFFPYYS+ L G DN
Sbjct: 137 FYAD--SHEVYVKMEYEIRQYEVDGPINIHSAANLLSKILYSRRFFPYYSYCTLSGFDN- 193
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
GK +Y YD VGS+E V GSG ++I P LD+ + + T LS+ + V
Sbjct: 194 GKPYIYAYDPVGSFESVTCECNGSGRSMIQPLLDSFIDKKNW----HNAEQTQLSQEDCV 249
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
L+ FASA ERDI T + LEI VL ++ + + + LR+D
Sbjct: 250 RLIAKAFASAAERDIKTKDNLEIYVLRENKVVHKVLPLRRD 290
>gi|378754633|gb|EHY64663.1| hypothetical protein NERG_02282 [Nematocida sp. 1 ERTm2]
Length = 242
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 117/213 (54%), Gaps = 2/213 (0%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y +N GT ++I GAD+CV A+DTR S Y+I +R +K L + +++++GF AD + +
Sbjct: 32 YGDNSGTSLSIVGADFCVVASDTRHSAMYNINTRQATKSFCLDGRFILSTTGFYADSRYI 91
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
LA YQ ++NK+M+ LL LY RFFP +++ L G + + +++Y
Sbjct: 92 FSKLAYEIDKYQFKYNKKMAIEQAAALLHVLLYTHRFFPKFTYCCLVGFNENNEPKIFSY 151
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
D VGSY+ GSG+ L+ P LD+ + + ++ V +E E + LVK F
Sbjct: 152 DPVGSYQETPCRCNGSGTALLQPMLDSWITRKNWYCEEGKNYVC--TEEEVISLVKDVFN 209
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
S E D+ T + LE+ V+ KD I R LR D
Sbjct: 210 SVAETDVKTGDGLEVYVIKKDQIVRSEYPLRSD 242
>gi|167538768|ref|XP_001751043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770452|gb|EDQ84148.1| predicted protein [Monosiga brevicollis MX1]
Length = 120
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 3/122 (2%)
Query: 102 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 161
LY KRFFPYY+ N+L GLD EGKGCVY+YD VGSYER + + G+ S+L+ P LDNQ+
Sbjct: 2 LYRKRFFPYYTNNILAGLDAEGKGCVYSYDPVGSYEREVFRAAGTASSLLQPLLDNQIGG 61
Query: 162 PSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELR 221
+ L QD PL + AV LVK F +A ERDIYT + + I ++ KDG+ E M LR
Sbjct: 62 KN---LANQDGPLPLDKERAVRLVKDIFVAAAERDIYTGDAVHIAIITKDGVTHEEMPLR 118
Query: 222 KD 223
+D
Sbjct: 119 RD 120
>gi|19074564|ref|NP_586070.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
gi|74630117|sp|Q8SRH6.1|PSB6_ENCCU RecName: Full=Probable proteasome subunit beta type-6; AltName:
Full=26S proteasome beta-type subunit PRE7; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE7
gi|19069206|emb|CAD25674.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
Length = 290
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 124/216 (57%), Gaps = 8/216 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY++N GT + + D+ V A DTR S+ I SR+ SKI ++ D ++ +GF AD
Sbjct: 83 FDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGD-FLLTGTGFYADT 141
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+ + + I Q++ + ++ + LLS LY KRFFPYYSF VL G + +GK V
Sbjct: 142 HEVYVKMV--YEIRQYEVDDSINIHSAANLLSKILYSKRFFPYYSFCVLSGFE-KGKPYV 198
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YD +GS+ V GSG ++I P LD+ + + A++ T LS+ + + LV
Sbjct: 199 YSYDPIGSFGSVTCVCSGSGRSMIQPLLDSFIDKKN--WNNAEE--TQLSQEDCIRLVVK 254
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+ T + LE+ V+ ++ + RE LR+D
Sbjct: 255 AFNSAAERDVKTKDNLEVCVMRENQVMRETFPLRRD 290
>gi|449329565|gb|AGE95836.1| 20S proteasome alpha-type subunit [Encephalitozoon cuniculi]
Length = 290
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 124/216 (57%), Gaps = 8/216 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY++N GT + + D+ V A DTR S+ I SR+ SKI ++ D ++ +GF AD
Sbjct: 83 FDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGD-FLLTGTGFYADT 141
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+ + + I Q++ + ++ + LLS LY KRFFPYYSF VL G + +GK V
Sbjct: 142 HEVYVKMV--YEIRQYEVDDSINIHSAASLLSKILYSKRFFPYYSFCVLSGFE-KGKPYV 198
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YD +GS+ V GSG ++I P LD+ + + A++ T LS+ + + LV
Sbjct: 199 YSYDPIGSFGSVTCVCSGSGRSMIQPLLDSFIDKKN--WNNAEE--TQLSQEDCIRLVVK 254
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F SA ERD+ T + LE+ V+ ++ + RE LR+D
Sbjct: 255 AFNSAAERDVKTKDNLEVCVMRENQVMRETFPLRRD 290
>gi|162606130|ref|XP_001713580.1| 26S proteasome SU B6 [Guillardia theta]
gi|13794500|gb|AAK39875.1|AF165818_83 26S proteasome SU B6 [Guillardia theta]
Length = 239
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 128/219 (58%), Gaps = 12/219 (5%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY NNGG +AI G +CV A+DTR+S GYSI SR +I+K+++ C++ SSG +D+
Sbjct: 30 FDPYQNNGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRILKISNLCLLGSSGMISDI 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L + L ++ +N +++ + L S+ LY +RFFP+Y+FN+L G++ GK
Sbjct: 90 NILHQKLRNEIFRLKYLNNTELNLNGIVYLTSSLLYSRRFFPFYTFNILTGINELGKASN 149
Query: 128 YTYDAVGSYERVGYSSQG---SGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDL 184
YTYDA+GS++ S+ G S + IM +++ + K P+ ++ T L + V L
Sbjct: 150 YTYDAIGSFDCNHASTVGNCQSSAQCIMDYIEER-KIPND-----RNYKTIL---QVVSL 200
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+K F++ + + + L++ +++K GI E LR D
Sbjct: 201 IKIIFSTLCNKQVDMGDILQLFIVSKKGILVENSILRLD 239
>gi|429962010|gb|ELA41554.1| hypothetical protein VICG_01418 [Vittaforma corneae ATCC 50505]
Length = 275
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 10/213 (4%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y+NNGGT + + + + A+DTR S+ Y+I SR +KI K+ + +A++GF AD +
Sbjct: 73 YENNGGTSLVVTTDNKIIIASDTRHSSDYTINSRKMTKIFKIGE-FYLATTGFFAD--SF 129
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
+ + + Q++ +++ A+ LL N LY KRFFPYYS+ +L G DN G VY+Y
Sbjct: 130 EVYTNLMYQVKQYETYSRITLKALAHLLHNLLYSKRFFPYYSYAILCGFDN-GTATVYSY 188
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
D VGSY++ GS S +I P LD+ + + +D P S +E ++LVK F
Sbjct: 189 DPVGSYDKTRCRCNGSSSVMIQPLLDSWIMGKN-----FKDFKEP-SFSETLELVKKAFD 242
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A+ERD+ T + LEI V+ KD + E + LRKD
Sbjct: 243 AASERDVKTKDYLEIYVIEKDSMSHELIPLRKD 275
>gi|396081771|gb|AFN83386.1| 20S proteasome subunit beta type-1 [Encephalitozoon romaleae
SJ-2008]
Length = 289
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 120/216 (55%), Gaps = 8/216 (3%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY++N GT V + D+ V DTR S+ I SR+ +KI ++ D + +GF AD
Sbjct: 82 FNPYEDNSGTVVCLRQDDFIVIGGDTRHSSDMIINSREMTKIFQIGD-LFLTGTGFYADS 140
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+ +A + I Q++ ++ + LLS LY KRFFPYYS+ VL G +N G+ V
Sbjct: 141 HEVYVKMA--YEIRQYEVEGSINVHSAANLLSKILYSKRFFPYYSYCVLSGFEN-GRPYV 197
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+YD VGS+E V GSG ++I P LD+ + + LS+ + V L+
Sbjct: 198 YSYDPVGSFESVTCICNGSGRSMIQPLLDSFVSKKN----WNNAGQAQLSQEDCVRLITK 253
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F +A ERD+ T + LE+ V+ ++ + R+ LR+D
Sbjct: 254 AFNAAAERDVKTKDNLEVYVVRENEVERKVFPLRRD 289
>gi|303390057|ref|XP_003073260.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
ATCC 50506]
gi|303302405|gb|ADM11900.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
ATCC 50506]
Length = 287
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 8/222 (3%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASS 61
K+ ++PY++N GT V + D+ + A DTR S+ I SR+ SKI ++ + ++ +
Sbjct: 74 VKEEEKFNPYEDNSGTTVCLKQDDFIIVAGDTRHSSDMVINSREMSKIFRMGN-FLLTGT 132
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
GF AD + + + I Q++ + MS + LLS LY +RFFPYYSF L G +
Sbjct: 133 GFYADTYEVYRKMTDE--ILQYEVDGPMSIHSSANLLSKILYSRRFFPYYSFCTLSGFE- 189
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181
+GK +Y YD +GSY+ +GSG ++I P LD+ + + A DA +S+ +
Sbjct: 190 KGKAYLYQYDPLGSYDLTTCVCKGSGRSMIQPLLDSFIDKKN--WNNASDA--QISQEDC 245
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ LV F S ERDI T + LEI V+ + + + + LR+D
Sbjct: 246 IRLVVKAFNSVAERDIKTKDNLEIYVVREHELTHQILPLRRD 287
>gi|426355245|ref|XP_004045039.1| PREDICTED: proteasome subunit beta type-1 [Gorilla gorilla gorilla]
Length = 245
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 80/116 (68%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 102 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 161
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG
Sbjct: 162 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 217
>gi|119567807|gb|EAW47422.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_c [Homo sapiens]
Length = 147
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 80/116 (68%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 145
>gi|336272341|ref|XP_003350927.1| hypothetical protein SMAC_04232 [Sordaria macrospora k-hell]
gi|380090694|emb|CCC04864.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 151
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 80 IYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 139
+Y+++H K MS A Q LS LY KRFFPYY + +LGGLD EGKG VY+YD VGSYER
Sbjct: 1 MYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILGGLDEEGKGAVYSYDPVGSYERE 60
Query: 140 GYSSQGSGSTLIMPFLDNQLK-----SPSPLLLPA--QDAVTPLSEAEAVDLVKTCFASA 192
+ G+ ++LIMPFLDNQ+ P + A + PL+ +E LVK F A
Sbjct: 61 QCRAGGAAASLIMPFLDNQVNFKNQYEPGSGVGHALQERERKPLTRSEGEILVKDAFDGA 120
Query: 193 TERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ER I + L+++V+ +DGI + L+KD
Sbjct: 121 VERHIEVGDGLQMMVITRDGIEEVLLPLKKD 151
>gi|37778970|gb|AAP20145.1| 20S proteasome beta 6 subunit [Pagrus major]
Length = 135
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 87/133 (65%), Gaps = 8/133 (6%)
Query: 93 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 152
A+ +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++
Sbjct: 9 AIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQ 68
Query: 153 PFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNK 210
P LDNQ+ + V PL++ +AV LVK F SA ERD+YT + L + V+ K
Sbjct: 69 PLLDNQIG------FKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYTGDALRVCVITK 122
Query: 211 DGIHREYMELRKD 223
+GI+ + + LRKD
Sbjct: 123 EGINEQTIPLRKD 135
>gi|119567806|gb|EAW47421.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_b [Homo sapiens]
Length = 166
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 80/116 (68%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S G+SI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG 123
L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EG
Sbjct: 90 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 145
>gi|440491899|gb|ELQ74504.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Trachipleistophora hominis]
Length = 243
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 119/216 (55%), Gaps = 10/216 (4%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y NN GT +A DY + AADTR S+ I SR +KI + D + + +GF AD+ +
Sbjct: 35 YANNSGTVLAFKQQDYVIIAADTRHSSEMGINSRKMTKIFEF-DGFIFSGTGFYADLNEV 93
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF-FPYYSFNVLGGLDNEGKGCVYT 129
L Y+++ K++ A+ L N LY +R YY F+VL G D G+ +Y+
Sbjct: 94 YFRLRYEVERYENEVEKRIGISALAHKLLNILYSRRGGLIYYVFSVLVGKDETGEPVLYS 153
Query: 130 YDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKT 187
+D +GSYE+V GS S +I P LD S ++ Q+ + L E+V+L K
Sbjct: 154 FDPIGSYEQVMCKCYGSASPMIQPLLD------STIMKYNQENASYQSLCMEESVELTKK 207
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F +A ERD+ T + L+IVV +DG++ E ++LRKD
Sbjct: 208 AFFAAAERDVNTGDYLQIVVYKRDGVNEELVDLRKD 243
>gi|169806330|ref|XP_001827910.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
bieneusi H348]
gi|161779358|gb|EDQ31381.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
bieneusi H348]
Length = 276
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 121/213 (56%), Gaps = 10/213 (4%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y++NGGT + I + + AADTR++ Y+I +R +KI K+ D + + GF AD +
Sbjct: 74 YEDNGGTTLTIKLQNKLIIAADTRLNAQYNIYTRYSTKIHKIKDY-FLTTVGFHADSHKI 132
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
L + + Q++ +M+ A+ + L + LY RFFP YS+ L G +N G+ +Y+Y
Sbjct: 133 A--LTLDYQLKQYEQYDKMTLSALAEFLHHVLYNNRFFPLYSYCCLCGFEN-GEATIYSY 189
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
D +GSY++ GSG+ +I P D+ + + + + +S +A+ LVK F
Sbjct: 190 DCIGSYQKTECRVNGSGTAMIQPLFDSWISGKNF------ENYSQISFEDALCLVKKAFH 243
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA E D+ T + LEI +L+ + + +E ++LRKD
Sbjct: 244 SAAEADVKTGDYLEIYILDNNKVEKEVIDLRKD 276
>gi|429965201|gb|ELA47198.1| hypothetical protein VCUG_01298 [Vavraia culicis 'floridensis']
Length = 242
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 118/216 (54%), Gaps = 10/216 (4%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
Y NN GT +A DY + AADTR S+ I SR +KI + D V + +GF AD+ +
Sbjct: 34 YANNSGTVLAFKQQDYVMIAADTRHSSVMGINSRKMTKIFEF-DGFVFSGTGFYADLNEV 92
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF-FPYYSFNVLGGLDNEGKGCVYT 129
L Y+++ +++S A+ L N LY +R YY F VL G D G +Y+
Sbjct: 93 YFRLRYEVEKYENEIERRISIRALAHKLLNILYSRRRGLIYYVFCVLIGKDETGDPVLYS 152
Query: 130 YDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKT 187
+D +GSYE+ GS S +I P LD S ++ Q+ V+ LS E+V+L K
Sbjct: 153 FDPIGSYEQTMCRCYGSASPMIQPLLD------STIMKHNQENVSYQSLSVEESVELTKK 206
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
F +A ERD+ T + L+IVV KDG+ E ++LRKD
Sbjct: 207 AFFAAAERDVNTGDYLQIVVYKKDGMTEELVDLRKD 242
>gi|255965748|gb|ACU45169.1| proteasome subunit beta type 1 [Prorocentrum minimum]
Length = 123
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 87/129 (67%), Gaps = 7/129 (5%)
Query: 96 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 155
QLLS LY KRFFPYY+FNVL G+D+EGKG VY YDA+GS+ERV Y++ GSGS+L+M L
Sbjct: 1 QLLSTMLYGKRFFPYYTFNVLVGIDDEGKGAVYHYDAIGSFERVPYTTSGSGSSLVMSVL 60
Query: 156 DNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIH 214
D Q++ + Q TP L++ + VDL +S ERDI+T + EI V++ G+H
Sbjct: 61 DAQIQKGN------QTIETPVLTKDKIVDLSMDVLSSVGERDIHTGDAGEIFVIDAAGVH 114
Query: 215 REYMELRKD 223
+ EL+ D
Sbjct: 115 KTKFELKLD 123
>gi|219123814|ref|XP_002182212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406173|gb|EEC46113.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 231
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 119/226 (52%), Gaps = 33/226 (14%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRM--STGYSILSRDYSKI---------IKLADKC 56
+ PY NGG A+AG D+ V + DTR+ +GY IL R++ KI + + K
Sbjct: 9 FEPYQLNGGLVAAVAGRDFVVLSTDTRLMGPSGYDILERNHVKIETTNSGELIVHASTKL 68
Query: 57 VMA-----SSGFQADVKALQKLLAA--RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFP 109
V A SSG AD + L++ + A R Y + + Q + A+ LL LY +R FP
Sbjct: 69 VYAPTFVGSSGCNADCEMLKRTVRADTRAAFYHGESDIQTA--AVATLLGQMLYSRRGFP 126
Query: 110 YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS-------- 161
+YSF V+GG++N G G VY YDA+GSYE+VG ++ G+G L+ P LD +S
Sbjct: 127 FYSFCVVGGMEN-GAGKVYVYDAIGSYEQVGVATSGTGRELLQPILDRSFRSREVFRSTI 185
Query: 162 ----PSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKL 203
P ++LP S+ EA+ + + S +ERDI +++
Sbjct: 186 ESELPKQVMLPVAPRQVDCSKDEAISKLVDGYRSVSERDIGVGDRV 231
>gi|300702270|ref|XP_002995154.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
gi|239604000|gb|EEQ81483.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
Length = 282
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 127/225 (56%), Gaps = 12/225 (5%)
Query: 1 MTKQ-HPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMA 59
+TKQ P ++PY++N GT VAI D + AADTR + I SR+ KI + D V
Sbjct: 68 VTKQKEPQFNPYEDNSGTAVAIKLNDLIIVAADTRHCSEMGIYSRNTPKIYYIGDYLVTI 127
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
+GF AD L +L + L+Y+ + ++S ++ L S +Y KR FPYYS+ L G
Sbjct: 128 -TGFYADGIELINILKYQVLLYESFN--KISIHSLANLASKVMYSKRLFPYYSYVTLSGF 184
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 179
+G+ VY++D +G +E+V GSG++ I P LD+ ++ + + +P+ +
Sbjct: 185 -CDGEPFVYSFDCLGHFEKVSTVCNGSGASFIQPLLDSLIEKKNWI------GESPVVDE 237
Query: 180 EAV-DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
E +V+ F +A+ERD+ T + LE+ V+ ++G + +LR+D
Sbjct: 238 EYTKSVVRKAFDAASERDVKTGDYLEMYVVRENGAVKSVEKLRQD 282
>gi|405946999|gb|EKC17751.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 128
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 85/135 (62%), Gaps = 15/135 (11%)
Query: 97 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 156
+L+NTLY +RFFPYY++N+L GLD G GCVY+YD VG+YERV + GSG +LI P LD
Sbjct: 1 MLANTLYGRRFFPYYTWNILAGLDENGVGCVYSYDPVGNYERVRVNVTGSGESLIQPLLD 60
Query: 157 NQLK--------SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVL 208
NQ + P PL + LS A+ ++VK F SA ERDIYT + +E++V+
Sbjct: 61 NQFERQHQQFAAKPPPLNV-------DLSLADTEEIVKDAFYSAGERDIYTGDTVEVMVI 113
Query: 209 NKDGIHREYMELRKD 223
+G+ E EL D
Sbjct: 114 TGEGVRIETHELNID 128
>gi|224007805|ref|XP_002292862.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
pseudonana CCMP1335]
gi|220971724|gb|EED90058.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
pseudonana CCMP1335]
Length = 219
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 117/219 (53%), Gaps = 19/219 (8%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQAD 66
+ PY NGG A+AG DY + A+DTR++ G Y I SR ++ + ++ S+G +D
Sbjct: 2 FDPYQLNGGLVAAVAGKDYVIIASDTRLTDGGYGINSRRNIQLQQTNLPVMIGSAGCASD 61
Query: 67 VKALQKLLAARHLIYQHQHN---KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE- 122
++L++ + R + + N +M ++ LL LY +R FP+YSF V+ G+D +
Sbjct: 62 CESLKRRV--RLELDSLECNFPSGKMGVQSVANLLQQVLYGRRGFPFYSFCVVAGIDRDE 119
Query: 123 -------GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD--NQLKSPSPLLLPAQDAV 173
G G VY YDA+GS+ERV S G+G L+ P LD +K + ++ QD +
Sbjct: 120 QTGDSKCGMGAVYVYDAIGSFERVAVGSAGTGRELLQPILDRMGSIKQNNNVI---QDGL 176
Query: 174 TPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDG 212
+ EAV+ V + S ER+I +++ I V+ G
Sbjct: 177 AQCTWEEAVNNVARAYQSVAEREISVGDEVVICVVKASG 215
>gi|358253687|dbj|GAA53599.1| 20S proteasome subunit beta 6, partial [Clonorchis sinensis]
Length = 156
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 71/103 (68%)
Query: 57 VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL 116
V+A++GF DV L KLL R Y++ H K++S A LLS TLY +RFFP+Y ++L
Sbjct: 5 VLATTGFHGDVLTLTKLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSIL 64
Query: 117 GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 159
GGLD EG+G VY YD VGS+ERV ++ GS ++ PFLD++L
Sbjct: 65 GGLDEEGRGAVYRYDPVGSFERVKCAAAGSSGVILQPFLDHRL 107
>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
Length = 212
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 107/210 (50%), Gaps = 16/210 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D+ V AAD R + GY + + KIIK+ D M ++G AD + L +
Sbjct: 14 KGTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQMLAEW 73
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
LA Y+ + ++MS A Q LS L+ +F+PY +LGG D + + +Y D
Sbjct: 74 LANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGGYDTQPR--LYNIDWF 131
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS Y + GSGS + +++Q SP+ LS EAV+L K AS+
Sbjct: 132 GSVTEEKYVATGSGSPTAIGVIEDQY-SPN------------LSMEEAVELAKRAVASSI 178
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
RD +T N +++VV+ KD +REY KD
Sbjct: 179 RRDTFTGNGVDVVVIGKD-FYREYSFELKD 207
>gi|357016905|gb|AET50481.1| hypothetical protein [Eimeria tenella]
Length = 236
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%)
Query: 7 AWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD 66
++PY NNGGT V +AG D+ + DTR+S GYSI SR +SKI +L +C +ASSG QAD
Sbjct: 28 GFNPYVNNGGTVVCVAGEDFVIGVGDTRLSVGYSIHSRHHSKITQLTSRCCIASSGMQAD 87
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 113
+ L KLL AR +Y+H H + S PA+ QLLS+ LY +RFFP F
Sbjct: 88 INTLHKLLKARVAVYRHLHRAEPSGPALSQLLSSLLYSRRFFPLLHF 134
>gi|195046971|ref|XP_001992246.1| GH24307 [Drosophila grimshawi]
gi|193893087|gb|EDV91953.1| GH24307 [Drosophila grimshawi]
Length = 285
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Query: 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLA 75
G+ + I G D+ V A+D R+ T IL R + K+ + + ++ S G DV A+ L+
Sbjct: 82 GSIIFIEGRDFVVIASDNRLITKLDIL-RKHFKLFPMTPQSIIGSIGNWGDVVAMTALIR 140
Query: 76 ARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
R +Y+ + K +S A+ ++S +Y +R FP +L GLDNEGKG V+ +D +G+
Sbjct: 141 RRVQVYEQDNKKTISTEALASMISTLMYNRRLFPCLMITILAGLDNEGKGAVFHFDEIGN 200
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
ER Y G +++ L + + ++P+ D L++ A + + CF A+
Sbjct: 201 RERCRYLIIGGARDIMLAKLRHSIGEIDSGIIPS-DQYQQLTKERAFGIARDCFIHASHL 259
Query: 196 DIYTANKLEIVVLNKDGIHREYMELR 221
N + I + G ++LR
Sbjct: 260 RADIGNTVMIKTIYTKGSQETILKLR 285
>gi|302348749|ref|YP_003816387.1| proteasome beta subunit [Acidilobus saccharovorans 345-15]
gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
Length = 207
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
S Y+ GT V + D V A D RM+ G ++SR+ K+ + ++ +A SG ADV
Sbjct: 1 MSAYEIEQGTAVGVKAKDGVVLATDKRMAYGSFVMSRNAKKVFLINNRAAIAMSGLYADV 60
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
A+ + L A Y+ + MS A+ +LLS LY + P+ ++GG+D +G+ +
Sbjct: 61 GAILRYLTAESKYYELTEERTMSLYAISKLLSGILYSYKMLPFIIEALVGGIDRDGQPKI 120
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
YT D++GS Y + GSG+T + FL++Q DA++ L +AE V +
Sbjct: 121 YTLDSLGSVSEDKYMAVGSGATTALGFLEDQY----------NDALS-LDQAEQVAV--G 167
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHRE 216
+ ERD T + ++++ ++ G +E
Sbjct: 168 ALRISMERDASTGDGIDVISISTSGAVKE 196
>gi|341582772|ref|YP_004763264.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
gi|340810430|gb|AEK73587.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
Length = 200
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 21 IAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI 80
I D V AADT+ S + + + + KI+ + D+ + ++G DV+AL ++L A
Sbjct: 13 IKARDGVVLAADTQASLDHMVETLNIRKIVPITDRIAITTAGSVGDVQALARMLEAEARY 72
Query: 81 YQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVG 140
YQ N+ M+ AM LLSN L ++FPY ++GG +E + DA+G
Sbjct: 73 YQFTWNRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTLANLDAMGGLVFDD 130
Query: 141 YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTA 200
Y++ GSGS + L++ K +S EA +L +A +RD+YT
Sbjct: 131 YTATGSGSPFAIAVLEDGFKK-------------DMSVEEAKELAVRAVRTAGKRDVYTG 177
Query: 201 N-KLEIVVLNKDGIHREYMELRK 222
+ K+++VV+ KDG+ E++E ++
Sbjct: 178 DRKVQVVVITKDGMKEEFVEFKE 200
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V AAD R S G +LS+ SKI ++ D +A +G D+ +L +L
Sbjct: 5 KGTTTVGIVCKDGVVLAADMRASLGNMVLSKGVSKIFQIDDHLALAGAGSVGDILSLVRL 64
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + ++MS A+ L SN L +R+FPY+ + ++ G D K +Y+ D
Sbjct: 65 LRAEAKLYRARVGREMSTKALATLTSNILSGRRYFPYFGWFLVAGYDE--KPGLYSIDMA 122
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y S GSG LDN+ ++ + V L +A
Sbjct: 123 GGITEDKYVSAGSGMEFAYSVLDNEYDE-------------KMNVKKGVKLAIKAINTAI 169
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+RD++T + + +VV+ K+G Y EL K+
Sbjct: 170 KRDVFTGDGIMVVVITKEG----YSELSKE 195
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 14/197 (7%)
Query: 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLA 75
GT V I +D V AA+ R+S G ++S+ K+ ++ DK MAS+G AD++ L +++
Sbjct: 6 GTTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVE 65
Query: 76 ARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
A +Y+ N + +LLS LY +R FPYY+ V+GGLD EG +Y+ D +G+
Sbjct: 66 AEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGS-HLYSLDPIGA 124
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
Y + GSG+ L + +++ K +S EA+ L +A +R
Sbjct: 125 IIEDDYVALGSGTQLAISIVESNYKK-------------DMSLDEALSLALKSVYAAMKR 171
Query: 196 DIYTANKLEIVVLNKDG 212
D + + ++++V+ K G
Sbjct: 172 DAASGDGVDVLVIGKSG 188
>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 194
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D V AAD R + G + S++ +K+ ++ D +A +G D+ +L +L
Sbjct: 2 KGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQVDDHLAIAGAGLVGDILSLVRL 61
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + ++MS AM L+SN L+ R+ PY+++ ++GG D + +Y+ DA
Sbjct: 62 LRAEAKLYRARVGREMSVKAMATLVSNVLHGSRYLPYFAWFLIGGYDVRPR--LYSIDAA 119
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G + + GSG + L+ L E VDL +A
Sbjct: 120 GGVTEERFIAAGSGMEFALALLEENFSDGMDL-------------EEGVDLAVRAVKAAM 166
Query: 194 ERDIYTANKLEIVVLNKDGIHRE 216
RD+YT + +V + K+G +RE
Sbjct: 167 RRDVYTGEGVTVVTITKEG-YRE 188
>gi|223477879|ref|YP_002582184.1| proteasome subunit beta [Thermococcus sp. AM4]
gi|214033105|gb|EEB73933.1| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 200
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I D V AADT+ S G + + + KI+ + D+ + ++G DV+AL +
Sbjct: 5 KTGTTTVGIKVKDGVVLAADTQASLGNMVETLNIRKILPITDRIAITTAGSVGDVQALAR 64
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L A+ YQ + M+ AM LLSN L ++FPY ++GG + K + + DA
Sbjct: 65 MLEAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQILIGGYVD--KPELASVDA 122
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G Y++ GSGS + +++ + +S EA +L +A
Sbjct: 123 LGGLVFEKYTATGSGSPFAIAIIEDGYRE-------------DMSIEEAKELAVRAVRTA 169
Query: 193 TERDIYTAN-KLEIVVLNKDGIHREYMELRK 222
+RD+YT K+++VV+ KDG+ E++E ++
Sbjct: 170 GKRDVYTGERKVQVVVITKDGMKEEFVEFKE 200
>gi|429216737|ref|YP_007174727.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429133266|gb|AFZ70278.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 207
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLA 75
GT + I D V A D RMS G I+SR+ K+ L D+ +A +G ADV L +++
Sbjct: 8 GTALGIKAKDGVVLATDKRMSYGSFIMSRNAKKVYLLNDRVGIALTGLYADVSGLVRIMN 67
Query: 76 ARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
A Y+ + MS A+ +L SN LY + P+ +++GGLD +GK +YT DA+GS
Sbjct: 68 AEISYYETTNETTMSLYAISKLFSNILYSYKMLPFLIESIIGGLDRDGKPKIYTLDALGS 127
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
Y + GSG T + L+ D +T + EAE + + T + ER
Sbjct: 128 VTEDKYMAVGSGGTTALGVLE----------YSYNDNLT-IDEAEKIAI--TALKTTMER 174
Query: 196 DIYTANKLEIVVLNKDG 212
D + + ++++++ +G
Sbjct: 175 DSSSGDGIDLLIIKSEG 191
>gi|195064491|ref|XP_001996575.1| GH21877 [Drosophila grimshawi]
gi|193895395|gb|EDV94261.1| GH21877 [Drosophila grimshawi]
Length = 223
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
N GT +AI G D+ V A+D M++ D + + + VM G DV ++ L
Sbjct: 31 NFGTILAIGGVDFAVIASDYCMTS-------DLDNLFPMTRQSVMGCIGSWVDVASMNAL 83
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ R + + + ++ + ++S+T+ +R FP+ + +L GLD GKG VY Y+ V
Sbjct: 84 IKRRGQMRELDNRSKLPTEILASIISSTINSRRLFPWRTSTILAGLDVMGKGAVYQYNDV 143
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPS--PLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G R YS GS ++ P L++ + P PL L++ A DLV+ CF
Sbjct: 144 GQRGRFLYSVLGSARNIMWPQLNHVIGKPQHYPL----------LTKERAFDLVRDCFMD 193
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELR 221
A+ + I ++ KD I + ++LR
Sbjct: 194 ASRVHTVIGDTALIKIITKDLIEEQSLKLR 223
>gi|240104109|ref|YP_002960418.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595730|sp|C5A2D5.1|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 200
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I + V AADT+ S G + + + KI+ + D+ + ++G DV+AL +
Sbjct: 5 KTGTTTVGIKVKEGVVLAADTQASLGNMVETLNIRKILPITDRIAITTAGSVGDVQALAR 64
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L A+ YQ + M+ AM LLSN L ++FPY ++GG + K + + DA
Sbjct: 65 MLEAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQIIIGGYVD--KPELASVDA 122
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G Y++ GSGS + +++ + +S EA +L +A
Sbjct: 123 LGGLVFEKYTATGSGSPFAIAIIEDGYRE-------------DMSIEEAKELAVRAVKTA 169
Query: 193 TERDIYTAN-KLEIVVLNKDGIHREYMELRK 222
+RD+YT K+++VV+ KDG+ E++E ++
Sbjct: 170 GKRDVYTGERKVQVVVITKDGMKEEFVEFKE 200
>gi|390961463|ref|YP_006425297.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
gi|390519771|gb|AFL95503.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
Length = 200
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 21 IAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI 80
I D V AADT+ S + + + + KI+ + D+ + ++G DV+AL ++L A
Sbjct: 13 IKARDGVVLAADTQASLDHMVETLNIRKIVPITDRIAITTAGSVGDVQALARMLEAEARY 72
Query: 81 YQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVG 140
YQ N+ MS AM LLSN L ++FPY ++GG E + D +G
Sbjct: 73 YQFTWNRPMSTKAMANLLSNILNENKWFPYLVQIIIGGYVEE--PTLANLDPMGGLIFDD 130
Query: 141 YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT- 199
Y++ GSGS + L++ K +S EA +L +A +RD+YT
Sbjct: 131 YTATGSGSPFAIAVLEDGFKK-------------DMSVKEARELAIRAVRTAGKRDVYTG 177
Query: 200 ANKLEIVVLNKDGIHREYMELRK 222
+ K+++VV+ KDG+ E++E ++
Sbjct: 178 SRKVQVVVITKDGMKEEFVEFKE 200
>gi|240103778|ref|YP_002960087.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595756|sp|C5A7L1.1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 201
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP G T V + D V AAD R + G + S++ +K+ ++ D +A +G D+
Sbjct: 4 SPSAMKGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQIDDHLAIAGAGLVGDIL 63
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
+L +LL A +Y+ + ++MS A+ L+SN L+ R PY+++ ++GG D + + +Y
Sbjct: 64 SLVRLLRAEAKLYRAKVGREMSVKALATLVSNVLHGSRHLPYFAWFLIGGYDVKPR--LY 121
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+ DA G + + GSG + L+ L E +DL
Sbjct: 122 SIDAAGGVTEERFIAAGSGMEFALALLEENFSDGMGL-------------DEGIDLAVRA 168
Query: 189 FASATERDIYTANKLEIVVLNKDGIHRE 216
+A RD+YT + +V + K+G +RE
Sbjct: 169 VKAAIRRDVYTGEGVTVVAITKEG-YRE 195
>gi|195421055|ref|XP_002060834.1| GK20619 [Drosophila willistoni]
gi|194156919|gb|EDW71820.1| GK20619 [Drosophila willistoni]
Length = 229
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 117/222 (52%), Gaps = 23/222 (10%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILS-RDYSKIIKLADKCVMASSGFQAD 66
++P++ GGT VAIAG D+ A DTR++ ++I R SK+ ++ + V+ S G D
Sbjct: 21 FNPHEYIGGTLVAIAGNDFATIACDTRLTNDFNIRKMRSQSKLFDVSPQTVLGSVGCWCD 80
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCP-AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
AL L+ + L Y+ N CP ++ +L+ T + ++ Y+ +V+ G+D+ G G
Sbjct: 81 TLALLSLVRSYSLKYELD-NLMPVCPDSLASMLTRTKFTRQ---YFVSSVVAGIDSNGLG 136
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLD-------NQLKSPSPLLLPAQDAVTPLSE 178
VY D G+Y R+ Y G+G +I+P LD +Q+ + T L+
Sbjct: 137 AVYFNDPSGNYLRLPYHISGTGGRIILPTLDWFEGNEEDQMNA----------ITTSLTV 186
Query: 179 AEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMEL 220
+AV++ F +A +RDI+ N + I ++ ++G+ + + L
Sbjct: 187 DKAVEISMEAFRTARDRDIFIGNCMFINIITREGVQFKQLPL 228
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 14/207 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I A V AA+ R+S G+ LS K+ + DK +AS+G AD++AL K+L
Sbjct: 8 GATAVGIKTAGGVVLAAEKRVSYGFYTLSSSGKKVFVVDDKLAIASAGIIADMQALAKIL 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
Y+ + K+ S AM +LLS ++ +RF P+++ ++GG+D EG + D +G
Sbjct: 68 KLNAKSYELEMKKKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGVDEEGPHLI-VMDPLG 126
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ L LD ++ +S EA L +A E
Sbjct: 127 SLIEDNYAALGTGAKLAAAVLDGNYRN-------------DMSIEEAKKLAVQALKAAIE 173
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELR 221
RD + +++VV+++ G E + ++
Sbjct: 174 RDPVSGGGIDLVVVDEKGAREEEVRVQ 200
>gi|57642142|ref|YP_184620.1| proteasome subunit beta 2 [Thermococcus kodakarensis KOD1]
gi|74505318|sp|Q5JHL8.1|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
Length = 199
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 16/211 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I + V AADT+ S + + + + KI+ + D+ + ++G DV+AL +
Sbjct: 4 KTGTTTVGIRTKEGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQALAR 63
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L A YQ + M+ AM LLSN L ++FPY ++GG E + D
Sbjct: 64 MLEAEARYYQFTWGRPMTAKAMAHLLSNILNENKWFPYMVQIIIGGYVEE--PTLANLDP 121
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G Y++ GSGS + L++ + +S EA +L +A
Sbjct: 122 LGGLIFDDYTATGSGSPFAIAVLEDGFRK-------------DMSLEEAKELAVRAVRTA 168
Query: 193 TERDIYTAN-KLEIVVLNKDGIHREYMELRK 222
+RD+YT + K+++VV++KDG+ E++E ++
Sbjct: 169 GKRDVYTGDRKVQVVVISKDGMKEEFVEFKE 199
>gi|212224577|ref|YP_002307813.1| proteasome subunit beta 2 [Thermococcus onnurineus NA1]
gi|302595811|sp|B6YXV3.1|PSB2_THEON RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|212009534|gb|ACJ16916.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
Length = 200
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 21 IAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI 80
I D V AADT+ S G+ + + + KII + D+ + ++G DV+AL ++L A
Sbjct: 13 IKAKDGIVLAADTQASLGHMVETLNIRKIIPITDRIAITTAGSVGDVQALARMLEAEARY 72
Query: 81 YQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVG 140
YQ K MS AM LLSN L ++FPY +LGG E + D +G
Sbjct: 73 YQFTWGKPMSTKAMANLLSNILNGNKWFPYLVQIILGGYVEE--PTLANLDPLGGLIFDD 130
Query: 141 YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTA 200
Y++ GSGS + L++ K +S EA +L +A +RD+YT
Sbjct: 131 YTATGSGSPFAIAVLEDGYKK-------------DMSIEEAKELAVRAVRTAGKRDVYTG 177
Query: 201 N-KLEIVVLNKDGIHREYMEL 220
+ K++IV + K+GI E++E
Sbjct: 178 SRKIQIVAITKEGITEEFVEF 198
>gi|375082621|ref|ZP_09729674.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
gi|374742699|gb|EHR79084.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
Length = 199
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I D V AADT+ S + + + + KI+ + DK + ++G D++AL +
Sbjct: 4 KTGTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPITDKIAITTAGSVGDLQALAR 63
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L A YQ K M+ AM LLSN L ++FPY ++GG E + + D
Sbjct: 64 MLEAEARYYQFTWGKPMTAKAMANLLSNILNESKWFPYMVQIIIGGYVEE--PTLASLDP 121
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G Y++ GSGS + L++ K ++ EA +L +A
Sbjct: 122 LGGLIFDNYTATGSGSPFAIAILEDGYKE-------------DMTIEEARELAIRAVRTA 168
Query: 193 TERDIYTAN-KLEIVVLNKDGIHREYMELRK 222
+RD+YT K+++V + KDG+ E++E ++
Sbjct: 169 GKRDVYTGERKIQVVTITKDGMKEEFVEFKE 199
>gi|195022115|ref|XP_001985520.1| GH17107 [Drosophila grimshawi]
gi|193899002|gb|EDV97868.1| GH17107 [Drosophila grimshawi]
Length = 254
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
N GT +AI GAD+ + A+D M++ + + + + VM G DV ++ L
Sbjct: 62 NFGTILAIGGADFALIASDYCMTS-------ELDNLFPMTRQSVMGCIGSWVDVASMNAL 114
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ R + + + ++ + ++S T+ +R FP+ + +L GLD GKG VY Y+ V
Sbjct: 115 IKRRGQMRELDNRSKLPTEILASIISGTINSRRLFPWRTSTILAGLDVMGKGAVYQYNDV 174
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPS--PLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G R YS GS ++ P L++ + P PL L++ A DLV+ CF
Sbjct: 175 GQRGRFLYSVLGSARNIMWPQLNHVIGKPQHYPL----------LTKERAFDLVRDCFMD 224
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELR 221
A+ + I ++ KD I + ++LR
Sbjct: 225 ASRVHTVIGDTALIKIITKDLIEEQSLKLR 254
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 14/207 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I + V AA+ R+S G+ LS K+ + D+ +AS+G AD++ L K+L
Sbjct: 8 GATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKVFIVNDRLAIASAGIIADMQTLAKIL 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
Y+ + ++ S AM +LLS ++ +RF P+++ ++GG+D+EG + D +G
Sbjct: 68 KLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGIDDEGPHLI-VMDPLG 126
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ L + +D K L QDA L +A E
Sbjct: 127 SLIEDNYAALGTGAKLAIAIIDASYKPDMSL----QDAKK---------LAVQALKAALE 173
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELR 221
RD + +++VV++K+G E ++L+
Sbjct: 174 RDPVSGGGIDLVVIDKNGAREEEVKLQ 200
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 14/207 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AA+ R+S G+ LS K+ + DK +AS+G AD++AL K+L
Sbjct: 8 GATAVGIRAKDGVVLAAEKRVSYGFYTLSTAGKKVFIVNDKLAIASAGIIADMQALAKIL 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
Y+ + K+ + AM +LLS ++ +RF P+Y+ ++GG+D EG + D +G
Sbjct: 68 KLNARSYELEVKKKPTVKAMAKLLSVVMFSRRFMPFYAEVLVGGVDEEGPHLI-VMDPLG 126
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ L + LD + ++ EA L +A E
Sbjct: 127 SLIEDNYAALGTGAKLAVSLLDASYRP-------------DMTVEEAKKLAVQAVKAAIE 173
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELR 221
RD + +++VV++ G E ++++
Sbjct: 174 RDPVSGGGIDLVVVDGGGAREEEVKVQ 200
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V AAD R S G +LS + +K+ + D +A +G D+ +L +L
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + K+MS A+ L SN L+ RF PY+ + ++ G D K +Y+ D
Sbjct: 66 LRAEAKLYRARVGKEMSVKALATLTSNVLHGNRFMPYFGWFLIAGHDE--KPGLYSIDMA 123
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G +++ GSG L+ + PL V L +AT
Sbjct: 124 GGVTEDKFTAAGSGMEFAFSILEENYREDMPL-------------EGGVKLALRAIKAAT 170
Query: 194 ERDIYTANKLEIVVLNKDGIHREY 217
RD++T + +V + ++G +RE+
Sbjct: 171 RRDVFTGGGVTLVTVTREG-YREW 193
>gi|57641364|ref|YP_183842.1| proteasome subunit beta [Thermococcus kodakarensis KOD1]
gi|74502448|sp|Q5JDJ9.1|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
Length = 203
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 16/206 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V AAD R S G +LS +K+ ++ D +A +G D+ +L +L
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSERVTKVFQIDDHLAIAGAGTVGDILSLVRL 65
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + +++MS A+ L SN L+ R F Y ++ ++GG D+ + +Y+ DA
Sbjct: 66 LRAEAKLYRAKVSREMSVKALATLTSNILHSGRGFAYMAWFLVGGYDSAPR--LYSIDAA 123
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G +++ GSG L+ + PL E V L +AT
Sbjct: 124 GGVTEDRFTAAGSGMEFAFSVLEENYRDGIPL-------------EEGVKLALRAIKAAT 170
Query: 194 ERDIYTANKLEIVVLNKDGIHREYME 219
+RD++T + +V + ++G +RE+ E
Sbjct: 171 KRDVFTGGGVTLVTITEEG-YREWSE 195
>gi|449522153|ref|XP_004168092.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
Length = 66
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 1 MTKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKL 52
MTKQ WSPYDNNGG+CVAIAGADYCV AADTR+STGY+IL+RDYSKI KL
Sbjct: 1 MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKL 52
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V AAD R S G +LS++ +K+ ++ D +A +G D+ +L +L
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSKEVTKVFQIDDHLALAGAGSVGDILSLVRL 65
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + +++S A+ L SN L+ RF PY+ + ++ G D K +Y+ D
Sbjct: 66 LRAEVKLYRAKVGREISVKALATLTSNILHGSRFMPYFGWFLIAGYDE--KPALYSLDMA 123
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G +++ GSG L L++ K ++ E V L AT
Sbjct: 124 GGVTEDKFTAAGSGMELAFAVLEDGYKD-------------DINVEEGVKLALKAIKIAT 170
Query: 194 ERDIYTANKLEIVVLNKDG---IHREYME 219
RD++T + + +V + ++G ++RE +E
Sbjct: 171 RRDVFTGDGITLVTVTEEGYRELNREEIE 199
>gi|409096228|ref|ZP_11216252.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 201
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I D V AADT+ S + + + + KI+ + D+ + ++G DV+AL +
Sbjct: 6 KTGTTTVGIKVKDGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQALAR 65
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L A YQ + M AM LLSN L ++FPY ++GG +E + + + DA
Sbjct: 66 MLEAEARYYQFTWGRPMKTRAMANLLSNILNENKWFPYMVQILIGGYVDEPE--LASLDA 123
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G Y++ GSGS + +++ + +S EA +L +A
Sbjct: 124 LGGLVFDEYTATGSGSPFAIAIIEDGYRE-------------DMSVEEAKELAVRAVRTA 170
Query: 193 TERDIYTAN-KLEIVVLNKDGIHREYMELRK 222
+RD+YT + K+++V + +DG+ E++E ++
Sbjct: 171 GKRDVYTGDRKVQVVTITRDGMKEEFVEFKE 201
>gi|312375789|gb|EFR23090.1| hypothetical protein AND_13702 [Anopheles darlingi]
Length = 219
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%)
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+ L ++ R +Y+ QH K+MS PA+ Q+LS +Y +RFFPYY NVL GLD GKG V
Sbjct: 24 RLLGSIVGVRMQMYKDQHQKEMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDLNGKGVV 83
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 159
Y+YD +G E Y + GS L+ P LDNQ+
Sbjct: 84 YSYDPIGHCEMTTYRAGGSAGPLLQPVLDNQI 115
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V AAD R S G +LS + +K+ + D +A +G D+ +L +L
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + K+MS A+ L SN L+ RF PY+ + ++ G + G+ +Y+ D
Sbjct: 66 LRAEAKLYRAKVGKEMSVKALATLTSNVLHGSRFMPYFGWFLIAG--HTGEPGLYSVDMA 123
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G +++ GSG L+ + K L E V L +AT
Sbjct: 124 GGVTEDRFTAAGSGMEFAFSILEAEFKENMTL-------------EEGVKLALRAIKAAT 170
Query: 194 ERDIYTANKLEIVVLNKDGIHREYME 219
RD++T + +V + +G ++E+ E
Sbjct: 171 RRDVFTGGGVTLVTVTDEG-YKEWSE 195
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
+G T V + +D+ + AAD R + G+ I SR KI+ L++ M SG AD + L
Sbjct: 23 RSGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSD 82
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L +Y+ + + S + LLSN L+ +FFPY ++GG D + + +YT D
Sbjct: 83 VLREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQPR--LYTLDL 140
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
GS Y++ GSGS + L+ + + LS EA+ + T SA
Sbjct: 141 FGSITEDKYTATGSGSPIAYGVLEERYRE-------------DLSVEEAIKVATTAIRSA 187
Query: 193 TERDIYTANKLEIVVLNKDGIHREYM 218
RD + + ++VV+ G +++
Sbjct: 188 VLRDAASGDGADVVVIGPQGYEEKFI 213
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AAD R S G I +R+ +KI K+ + +A +G D+ L +LL
Sbjct: 10 GTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y Q K+MS A+ LL+N + ++FPY ++ ++GG D + K +Y+ D VG
Sbjct: 70 RAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEKPK--LYSVDMVG 127
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y++ GSG LD++ K L+ E + L +A +
Sbjct: 128 GITEDKYATAGSGMEFAYSILDSEYKD-------------NLTLEEGIKLAVKAINTAIK 174
Query: 195 RDIYTANKLEIVVLNKDG 212
RD+++ + + +V + K+G
Sbjct: 175 RDVFSGDGILVVTITKEG 192
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
W+ G T V I D V AD R S G ++S+ +KI ++ D +A +G D+
Sbjct: 2 WALDKIKGTTTVGIVCKDGVVLTADRRASLGNMVISKGVTKIFQVDDHLALAGAGAVGDI 61
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+L + L A +Y+ + K+MS A+ L SN L +++ PY+ + ++GG D K +
Sbjct: 62 LSLVRALRAESKLYRAKVGKEMSTKALATLTSNILSGRKYLPYFGWFLIGGYDE--KPSL 119
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
Y+ D G Y S GSG LDN+ L V L
Sbjct: 120 YSIDMAGGITEDKYVSAGSGMEFAYSILDNEYSEKITL-------------NNGVKLAIK 166
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD++T + + +V ++++G Y EL K+
Sbjct: 167 AINAAIKRDVFTGDGIMVVTIDREG----YRELSKE 198
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 14/207 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AA+ R+S G+ LS K+ + DK +AS+G AD++ L K+L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
Y+ + ++ S +M +LLS ++ +RF P+++ ++GG+D EG + D +G
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGIDEEGPHLI-VMDPLG 126
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ L + LD + ++ EA L +A E
Sbjct: 127 SLIEDNYAALGTGAKLAVAVLDTGYRP-------------DITVEEAKKLAVQALKAAIE 173
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELR 221
RD + +++ +++K+G E + ++
Sbjct: 174 RDPVSGGGIDLAIVDKNGAREEEVRVQ 200
>gi|409095355|ref|ZP_11215379.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 206
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D + AAD R + G I S++ +KI ++ D +A +G D+ ++ +L
Sbjct: 9 KGTTTVGLICRDGVILAADKRATMGNMITSKEVTKIFQIDDHLAIAGAGLVGDILSMVRL 68
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + ++MS + L++N L+ R + Y+++ ++GG D E + +Y+ DA
Sbjct: 69 LRAEARLYRARVGREMSVKVLTTLIANILHGGRGYGYFAWFLVGGYDTEPR--LYSIDAA 126
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y + GSG + L+N+ LS + + L +A
Sbjct: 127 GGVTEEKYVAAGSGMEFALAILENEFSE-------------GLSLEDGMRLAAKAVNAAI 173
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+RD+YT + +VV+ K+G Y EL D
Sbjct: 174 KRDVYTGEGITLVVVTKEG----YRELGDD 199
>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
gi|302595717|sp|A2BN24.1|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
Length = 204
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I GA Y V AA+ R+S G I+S+ K+ K+ D +A +G AD++A+ K
Sbjct: 6 GTGATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADLQAISK 65
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L A Y +++S A+ +LL+ LY +++P+ S ++GGL+ +G +Y D
Sbjct: 66 ILRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVMDP 125
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+GS Y++ GSG+ + + L+N +S +A L +A
Sbjct: 126 LGSLIEDDYAAIGSGAPIAIGILENGYSK-------------DMSVDDAKKLAIAAVRAA 172
Query: 193 TERDIYTANKLEIVVLNKD 211
ERD + + ++++V+ ++
Sbjct: 173 IERDAMSGDGIDLLVIRRE 191
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AAD R S G + +++ +KI ++ ++ +A +G D+ +L +LL
Sbjct: 7 GTTTVGIVCRDGVVLAADRRASLGNMVYAKNVTKIYQIDERLAIAGAGNVGDILSLVRLL 66
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ LL+N L R+FPY + ++GG D+ + +Y+ D G
Sbjct: 67 RAEVRLYRSRVGRSMSAKALATLLANILNGTRYFPYLVWFLVGGYDDAPR--LYSVDMAG 124
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y + GSG LD+Q K +S E V L SA +
Sbjct: 125 GITEDKYVAAGSGMEFAFSILDSQYKP-------------EMSVEEGVKLAVRAINSAIK 171
Query: 195 RDIYTANKLEIVVLNKDGIHREYME 219
RD++T + +V + + G +RE E
Sbjct: 172 RDVFTGEGITVVTITEKG-YRELSE 195
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 14/207 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AA+ R+S G+ LS K+ + DK +AS+G AD++ L ++L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFIINDKLAIASAGIIADMQTLARIL 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+ Y+ + K+ + AM +LLS ++ +R P+Y+ ++GG+D EG + D +G
Sbjct: 68 KLNVMSYELEVRKKPTVRAMAKLLSIIMFSRRLLPFYAEVLVGGVDEEGPHLI-VMDPLG 126
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ L + LD + +S EA L +A E
Sbjct: 127 SLIEDNYAALGTGAKLAVSLLDATYRP-------------DISLQEAKKLAVQAIKAAIE 173
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELR 221
RD + +++ V++ +G E ++++
Sbjct: 174 RDPVSGGGIDLAVVDNNGAREEEVKIQ 200
>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
gi|302595734|sp|C6A3R1.1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
Length = 199
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I D V AADT+ S + + + + KI+ + D+ + ++G D++AL +
Sbjct: 4 KTGTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPITDRIAITTAGSVGDLQALAR 63
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L A YQ K M+ AM LLSN L ++FPY ++GG E + + D
Sbjct: 64 MLEAEAKYYQFTWGKPMTAKAMANLLSNILNESKWFPYMVQIIIGGYVEE--PTLASLDP 121
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G Y++ GSGS + L++ K +S +A +L +A
Sbjct: 122 LGGLIFDNYTTTGSGSPFAIAILEDGYKE-------------DMSIEDARELAIKAVRTA 168
Query: 193 TERDIYTAN-KLEIVVLNKDGIHREYMELRK 222
+RD+YT K++++ + K+G+ E++E ++
Sbjct: 169 GKRDVYTGERKIQVITITKEGMKEEFVEFKE 199
>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 199
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I + V AADT+ S + + + + KI+ + D+ + ++G DV+ L +
Sbjct: 4 KTGTTTVGIKVKEGVVLAADTQASLDHMVETLNIKKILPITDRIAITTAGSVGDVQMLAR 63
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L A YQ K M+ AM LLSN L ++FPY ++GG E + D
Sbjct: 64 MLEAEARYYQFTWGKPMTAKAMANLLSNILNENKWFPYLVQIIIGGYVEE--PTLANLDP 121
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G Y++ GSGS + L+ + +S EA +L +A
Sbjct: 122 LGGLIFDDYTATGSGSPFAIAILEEGYRK-------------DMSIEEARELAIRAVRTA 168
Query: 193 TERDIYTAN-KLEIVVLNKDGIHREYMELRK 222
+RD+YT + K+++VV+ K+G+ E++E ++
Sbjct: 169 GKRDVYTGDRKIQVVVITKEGMKEEFVEFKE 199
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + + V AADTR S G I +++ +KI K+ + +A +G D+ L +LL
Sbjct: 7 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 66
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ K+MS A+ LL+N L ++FPY + ++GG D + + +++ D VG
Sbjct: 67 KAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEKPR--LFSVDMVG 124
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y++ GSG LD++ + +S + + L A +
Sbjct: 125 GITEDNYAAAGSGMEFAYSILDSEYRE-------------EMSVNDGIKLAVKAINVAIK 171
Query: 195 RDIYTANKLEIVVLNKDGIHREY 217
RD++T + L +V + KDG ++EY
Sbjct: 172 RDVFTGDGLLVVTITKDG-YKEY 193
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + + V AADTR S G I +++ +KI K+ + +A +G D+ L +LL
Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ K+MS A+ LL+N L ++FPY + ++GG D + + +++ D VG
Sbjct: 70 KAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEKPR--LFSVDMVG 127
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y++ GSG LD++ + +S + + L A +
Sbjct: 128 GITEDNYAAAGSGMEFAYSILDSEYRE-------------EMSVNDGIKLAVKAINVAIK 174
Query: 195 RDIYTANKLEIVVLNKDGIHREY 217
RD++T + L +V + KDG ++EY
Sbjct: 175 RDVFTGDGLLVVTITKDG-YKEY 196
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLA 75
GT V I +D V AA+ R++ G+++ SR K+ K+ D MAS G AD++ L K+
Sbjct: 10 GTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGMASIGILADMQVLTKIAK 69
Query: 76 ARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
A +Y + S + +LLS L+ R PY+ ++GG+D+EG ++ DA+GS
Sbjct: 70 AYMSLYSLDTKTRPSIRSAAKLLSYVLFSNRILPYFVEVLVGGIDDEGP-HLFIMDALGS 128
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
Y++ G+G+ L + L++ K P +S EA DL + R
Sbjct: 129 LIEDDYAAVGTGTKLAIAILESNYK-------PG------MSIKEARDLAIKAINQSISR 175
Query: 196 DIYTANKLEIVVLNKDGIHREYMELR 221
D + + ++I+ + +G E + L+
Sbjct: 176 DPVSGDGIDILTITGNGSTEETIPLQ 201
>gi|393228712|gb|EJD36350.1| N-terminal nucleophile aminohydrolase [Auricularia delicata
TFB-10046 SS5]
Length = 193
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 52 LADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYY 111
L DK V+A +G AD K + R Y+H H+K M ++ +++ LY
Sbjct: 9 LTDKAVLAVNGLAADGNMFVKKVKQRLEWYRHAHSKDMPLQSIARMIQTMLYV------- 61
Query: 112 SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL-----KSPSPLL 166
+N+LGG+D +G G VY++D VGSYER + G+ +L+ PFLDNQ+ + P
Sbjct: 62 -YNILGGIDEQGVGAVYSFDPVGSYERETCRAAGAAQSLVQPFLDNQIYFKNQQGDHPAH 120
Query: 167 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVL 208
LP ++ LV F TER I + L++ V+
Sbjct: 121 LPLDHVLS---------LVTDAFTGTTERHIEVGDGLQMFVI 153
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AAD R S G + +R+ +KI K+ + +A +G D+ L +LL
Sbjct: 7 GTTTVGIVCKDGVVLAADRRASLGNIVYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 66
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y Q ++MS A+ LL+N L ++FPY ++ ++GG D + + +Y+ DAVG
Sbjct: 67 RAEAKLYYAQFGREMSARALATLLANILNGYKYFPYMAWFLVGGYDEKAR--LYSVDAVG 124
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y + GSG LD + D +T E V L +A +
Sbjct: 125 GITEDKYMAAGSGMEFAYSILDAEY----------SDDITV---KEGVKLAVKAINTAIK 171
Query: 195 RDIYTANKLEIVVLNKDG 212
RD+++ + + +V + K+G
Sbjct: 172 RDVFSGDGILVVTITKEG 189
>gi|332158405|ref|YP_004423684.1| proteasome subunit beta [Pyrococcus sp. NA2]
gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
Length = 216
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D + AADT+ S + + + + KII + D+ + ++G DV+ + ++L
Sbjct: 25 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 84
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A YQ + MS AM LLSN L R+FPY ++GG E + D +G
Sbjct: 85 EAEARYYQFTWGRPMSTKAMANLLSNILNENRWFPYLVQIIIGGYVEE--PTIANLDPLG 142
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y++ GSG+ + L+ + L +A DL +A
Sbjct: 143 GLIFEDYTATGSGTPFALAILEEGYRK-------------NLGIEKAKDLAIKAIKAAGS 189
Query: 195 RDIYTAN-KLEIVVLNKDGIHREYMEL 220
RD+YT + K++++ + KDG+ E+++L
Sbjct: 190 RDVYTGSKKVQVMTITKDGMREEFVKL 216
>gi|397628563|gb|EJK68962.1| hypothetical protein THAOC_09830 [Thalassiosira oceanica]
Length = 204
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 72/127 (56%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S + NG +A+AG D A+D R+ Y ++ D+ K+ K+ D+ ++ +G DV+
Sbjct: 2 SILEYNGAAIIAMAGKDCVAIASDNRLGISYQTVAMDFKKVFKMNDRLMVGLAGLATDVQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L +LL R +Y+ + ++M+ L+SN LY KRF PY+ V+ GLD +GK +
Sbjct: 62 TLDQLLRFRMNLYELREEREMTPEVFTNLMSNMLYEKRFGPYFCEPVIAGLDPKGKPFLG 121
Query: 129 TYDAVGS 135
T D +G+
Sbjct: 122 TMDLIGA 128
>gi|329764912|ref|ZP_08256501.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795409|ref|ZP_10378773.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
gi|329138581|gb|EGG42828.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 195
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 107/205 (52%), Gaps = 16/205 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A++ R++ G ++S+ K + K +G AD++ L +
Sbjct: 5 GATAVGITFQDGIVLASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILTLQI 64
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
AA I + + + + + +++SN +Y +R+FP + ++GG+ + K ++T D +G
Sbjct: 65 AALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGIID--KPILFTLDPLG 122
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ + + LD Q K P+ +++ EA+DL K SA
Sbjct: 123 SVLPDEYAAVGTGAEMALGVLDPQFK-PN------------MTQEEAIDLAKRAVRSAAL 169
Query: 195 RDIYTANKLEIVVLNKDGIHREYME 219
RD + + L+++V+ KDGI +EY E
Sbjct: 170 RDSASGDGLDVLVITKDGI-KEYTE 193
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + A + A + R + GY I S+ K+ ++AD+ M +G D + L ++
Sbjct: 10 TGTTTVGLVFAGGVILATEKRATMGYMIASKRAKKVYQIADRIGMTIAGGVGDAQQLARI 69
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +YQ + +++++ A LLSN L R+FPYY ++GG+D+ G VY+ DA+
Sbjct: 70 ITVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPYYVQLLVGGIDDHGP-SVYSVDAM 128
Query: 134 -GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G+ + S GSGS + L+++ + P ++E EAV+L SA
Sbjct: 129 GGATKEEDIVSTGSGSPMAYGVLEDRYR-------PG------MNEDEAVELAVRALRSA 175
Query: 193 TERDIYTANKLEIVVLNKD 211
+RD + + +VV+ KD
Sbjct: 176 MKRDAGSGEGIHVVVITKD 194
>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
Length = 203
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 14/207 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AA+ R+S G+ LS K+ + DK +AS+G AD+++L +++
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
Y+ + K+ + +M +LLS ++ +R+ P+++ ++GG+D EG + D +G
Sbjct: 68 KINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGVDEEGNHLI-VMDPLG 126
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ L + LD + L QDA L +A E
Sbjct: 127 SLIEDNYAALGTGAKLAISVLDTGYREDITL----QDAKK---------LAVKALKAAIE 173
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELR 221
RD + +++V++++ G E ++++
Sbjct: 174 RDPVSGGGIDLVLIDQTGAKEEEVKVQ 200
>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
Length = 212
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 15/199 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + + V A + R + G I S+ K+ ++AD+ M ++G D ++L +L
Sbjct: 10 KGTTTVGLVFDEGIVLATEKRATMGTLIASKTAKKVYQIADRIGMTTAGGVGDAQSLARL 69
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ +H K +S A LLSN L R++PYY ++GG+D G VY+ DA+
Sbjct: 70 MQVECSLYKVRHGKPISVGAAATLLSNYLQQNRYYPYYVQLLVGGVDRNGP-SVYSVDAM 128
Query: 134 -GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G+ + S GSGS + L+++ + ++E EAVDL +A
Sbjct: 129 GGASKETDIVSTGSGSPMAYGVLEDRYHA-------------DMNEPEAVDLATRSLKAA 175
Query: 193 TERDIYTANKLEIVVLNKD 211
RD + + IVV+ +D
Sbjct: 176 MRRDSASGENISIVVITRD 194
>gi|195440110|ref|XP_002067892.1| GK22295 [Drosophila willistoni]
gi|194163977|gb|EDW78878.1| GK22295 [Drosophila willistoni]
Length = 212
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 9/215 (4%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILS-RDYSKIIKLADKCVMASSGFQAD 66
++P++ GGT VAIAG D+ A DTR++ ++I R SK+ ++ + V+ S G D
Sbjct: 4 FNPHEYIGGTLVAIAGNDFATIACDTRLTNDFNIRKMRSQSKLFDVSPQTVLGSVGCWCD 63
Query: 67 VKALQKLLAARHLIYQHQHNKQMSCP-AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
AL L+ + L Y+ N CP ++ +L+ T ++ Y+ V+ G+D+ G G
Sbjct: 64 TLALLSLVRSFSLKYELD-NLMPVCPDSLASMLTRTKLTRQ---YFVSTVVTGIDSNGLG 119
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
VY D +G+Y R+ Y G+G +I+P L N + + A T L+ + V +
Sbjct: 120 AVYFNDPIGNYLRLPYHISGTGGRIILPTL-NWFEGNEEDHMNA--ITTSLTVDKTVQIS 176
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMEL 220
F +A + D +T N + I ++ ++G+ + + L
Sbjct: 177 MEAFRAARDCDSFTGNCMFINIITREGVQFKQLPL 211
>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 203
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 14/207 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AA+ R+S G+ LS K+ + DK +AS+G AD+++L +++
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGRKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
Y+ + K+ + +M +LLS ++ +R+ P+++ ++GG+D EG + D +G
Sbjct: 68 KINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGVDEEGSHLI-VMDPLG 126
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ L + LD + L QDA L +A E
Sbjct: 127 SLIEDNYAALGTGAKLAISVLDTGYREDITL----QDAKK---------LAVKALKAAIE 173
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELR 221
RD + +++V++++ G E ++++
Sbjct: 174 RDPVSGGGIDLVLIDQTGAKEEEVKVQ 200
>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
Length = 213
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D V A++ R + GY I S+ KI ++AD+ M ++G D + + +L
Sbjct: 10 TGTTTVGLVLRDAVVLASEMRATMGYLIASKKAKKIYQIADRIGMTTAGGVGDAQQIARL 69
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +YQ + + ++ A+ LLSN L R++P+Y ++GG+D EG +Y DA+
Sbjct: 70 MTVECSLYQIRRGRPITIGAVATLLSNILNANRYYPFYVQLLVGGVD-EGGPKLYAVDAL 128
Query: 134 GSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G R + GSGS + L+++ LSE EAV L SA
Sbjct: 129 GGASREEEMVATGSGSPMAFGVLEDRYSK-------------DLSEDEAVALAVRAIRSA 175
Query: 193 TERDIYTANKLEIVVLNKDGIHREYME 219
+RD + + +VV+ K+ +RE E
Sbjct: 176 MKRDAGSGEGIHVVVITKEA-YRELTE 201
>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
Length = 200
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 14/207 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V AA+ R+S G I+SR K+ ++AD V+A++G AD+++L ++
Sbjct: 8 TGATAVGIKVNDGVVVAAEKRISYGGYIVSRAGKKVFRIADHMVIAAAGLFADMQSLSRI 67
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
++A + + + +M A +LLS LY + P+ S + G D EG +Y D V
Sbjct: 68 ISAEIMYRELLSSSKMRVRAAAKLLSAILYSYKLMPFLSEIIFAGFDEEGY-HLYVLDPV 126
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS Y++ G+G+++ + ++++ K+ L+ +A +L +A
Sbjct: 127 GSIIEDDYAAIGTGASIAIGVIESEYKN-------------TLTIDQATELAIKSVKAAI 173
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMEL 220
RD + + ++I V+ +GI+ + L
Sbjct: 174 SRDAVSGDGIDIAVVTNNGINERSILL 200
>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 204
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
N G T V I D V AA+ R++ G+ LS K+ + D+ +AS+G AD++ L K
Sbjct: 6 NVGATAVGIRAKDGVVLAAEKRITYGFYSLSSSGKKVFIVNDRMAIASAGVIADMQTLAK 65
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L +Y+ ++ S AM +LLS ++ +R+ P+ + ++GG D EG V+ D
Sbjct: 66 ILRVNAKMYELDAKRKPSVAAMAKLLSIIMFNRRWMPFIAEVLVGGYDEEGP-HVFVLDP 124
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
VGS Y++ G+G+ + + LD+ K + EA L +A
Sbjct: 125 VGSLIEDDYAALGTGAKMAIGILDSGYKK-------------DIDVVEARKLAINAIRAA 171
Query: 193 TERDIYTANKLEIVVLN 209
ERD + +++V++
Sbjct: 172 LERDPVSGGGIDLVIIT 188
>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595692|sp|A8AA46.1|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 198
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 15/194 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AA+ RMS G I+S+ K+ K+ D+ MA +G AD++A+ + L
Sbjct: 5 GATAVGIKVKDGVVLAAERRMSYGGFIMSKAARKVFKVGDRMGMACAGLYADMQAIARAL 64
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
Y+ + ++M + +LL LY + FP + V GG D+E + ++ D VG
Sbjct: 65 ENEIRYYEISNKRKMKVRSAARLLGLILYSNKLFPLMTETVFGGYDDEPR--IFVLDPVG 122
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S YS+ G+G+ L M LD + + +S EA +L A+
Sbjct: 123 SVIEEKYSAVGTGAPLAMALLDKEYRE-------------DMSLEEAQNLAIESVKVASG 169
Query: 195 RDIYTANKLEIVVL 208
RD + + ++++V+
Sbjct: 170 RDSLSGDGIDVLVI 183
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A++ R + G I S+ K+ ++ D M ++G D + L +L+
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGNFIASKTAKKVYQIDDLVAMTTAGSVGDAQQLVRLV 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV- 133
+Y+ + N+ M+ + L+SN L R++P ++GG+D G G +Y+ DA+
Sbjct: 69 NVESQLYKMRRNESMTIKGIATLMSNFLNSNRYYPMMVQLLIGGVDKNGPG-IYSLDALG 127
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E S+ GSGS + L++Q + ++ E +DL +AT
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQYRE-------------DMTVKEGLDLAIRAIHNAT 174
Query: 194 ERDIYTANKLEIVVLNKDGIHR 215
+RD + +++VV+ K+ R
Sbjct: 175 KRDSASGENIDVVVITKEAFRR 196
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V + + AAD R + G I SR KI+K+ D M +G AD + L
Sbjct: 14 HGTTTVGFITKNAVILAADKRATAGTLIASRTVKKIVKITDYAAMTIAGLVADAQMLADA 73
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ + ++++ M LL+N L+ +++PY ++GG D E + +Y D
Sbjct: 74 IREEARLYETMNKRKLTVKGMATLLANVLFSTKYYPYLVQLIVGGYDTEPR--LYNLDYF 131
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS +S GSG SP L + +D LS EA++L A
Sbjct: 132 GSITEEKMTSTGSG-------------SPVALGVLEKDYRPDLSLEEAMNLAAKAIKVAI 178
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRK 222
RD T + ++++ ++ GI ++ L++
Sbjct: 179 MRDSATGDGVDVIAISSGGIRESFIPLQQ 207
>gi|224014869|ref|XP_002297096.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968215|gb|EED86564.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 204
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S + NG +A++G D A+D RM Y +S D+ KI ++ +K + +G +DV+
Sbjct: 2 SILEYNGAAIIAMSGKDCVGIASDNRMGISYQTVSMDFKKIFQMNEKLFVGLAGLASDVQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L +LL R +Y+ + ++M+ LLSN LY KRF PY++ V+ GLD K +
Sbjct: 62 TLDQLLRFRMNLYELREEREMTPKVFTNLLSNMLYEKRFGPYFAEPVVAGLDENDKPYLA 121
Query: 129 TYDAVGS 135
T D +G+
Sbjct: 122 TMDLIGA 128
>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066683|ref|YP_007433765.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449068957|ref|YP_007436038.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
gi|121697373|sp|Q4JAY3.1|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449035191|gb|AGE70617.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449037465|gb|AGE72890.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
Length = 195
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 105/204 (51%), Gaps = 15/204 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T + I D V AA+ R+S G +LS+ K+ KL + +A +G D++ L +++
Sbjct: 7 TAIGIKTKDGVVLAAERRLSYGDFVLSKSARKVFKLG-RFGIAGAGIVGDIQTLTRIMNV 65
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
Y+ +++++S A +LLS LY + PY S + GG+D +G ++ D +GS
Sbjct: 66 EIKYYEMYNSRKISARAAAKLLSVILYQNKVLPYISELLFGGVDEDGP-KLFILDPIGSL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
Y++ GSG+ + + L+ + L+ A +L SA ERD
Sbjct: 125 IEDSYAAVGSGARVAIGVLEAEYNE-------------SLTSEAAKELAIKSMKSAVERD 171
Query: 197 IYTANKLEIVVLNKDGIHREYMEL 220
+ + + ++I+++NK+ I+ +++++
Sbjct: 172 VMSGDGIDILIINKNNIYEDFIKI 195
>gi|302829446|ref|XP_002946290.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
gi|300269105|gb|EFJ53285.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
Length = 204
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S + NG VA+AG + +D R Y +S D K+ K+ DK + SG D +
Sbjct: 2 SIFSYNGSAIVAMAGKECVAIGSDLRFGVQYQTISCDTPKVFKIHDKLYLGLSGLLTDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +Y+ + + M G +LSN LY +RF PY++ V+ GL+ +G +
Sbjct: 62 TLHQKLLFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPDGTPYLS 121
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV-DLVKT 187
D +G+ E G SP L + P E E + + V
Sbjct: 122 GMDTIGAIETAKDFMIGG-------------TSPESLYGMCESMWRPDMEPEELFETVAQ 168
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
C S +RD I V+ KD + ++ R D
Sbjct: 169 CLMSGFDRDALAGWGAVIHVITKDKVITRTLKTRMD 204
>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
Length = 213
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 6 PAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQA 65
P P G T + I AD + A + R + G I S+ K+ ++AD+ M ++G
Sbjct: 2 PEQLPESMKGTTTIGIVFADGVILATEKRATMGLMIASKKAKKVYQVADRIGMTTAGGVG 61
Query: 66 DVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
D + L ++L +YQ + ++ ++ A LLSN L R+FPYY ++GG+D +G
Sbjct: 62 DAQQLARILNVECNLYQIRRSRPITVGATATLLSNYLNQNRYFPYYVQLLVGGVDEKGP- 120
Query: 126 CVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDL 184
VY+ DA+ G+ + + GSGS + L+++ K P ++E A+++
Sbjct: 121 SVYSVDAMGGATKEEEIVATGSGSPMAYGVLEDRYK-------PG------MTEEMAIEI 167
Query: 185 VKTCFASATERDIYTANKLEIVVLNKD 211
SA +RD + + +V + KD
Sbjct: 168 AVRGLKSAMKRDAGSGEGIHVVAITKD 194
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I +D V AAD R S G + +++ +KI K+ + +A +G D+ L +LL
Sbjct: 10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y Q K+MS A+ LL+N L R PY ++ ++GG D + + +Y+ D +G
Sbjct: 70 RAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEKPR--LYSVDMMG 127
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y + GSG LD++ + L E + + SA +
Sbjct: 128 GITEDKYVAAGSGMEFAYSVLDSEYRE-------------DLKVREGIKIAVEAINSAIK 174
Query: 195 RDIYTANKLEIVVLNKDGIHRE 216
RD+++ + + +V + ++G +RE
Sbjct: 175 RDVFSGDGIMVVTITEEG-YRE 195
>gi|403374952|gb|EJY87444.1| Proteasome subunit beta type-3 [Oxytricha trifallax]
Length = 208
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S +D NG + VA++G + A DTR+ST + + ++ K+ D+C+M SG DV+
Sbjct: 2 SIFDYNGNSMVAMSGKNCVAIATDTRLSTQLMTVDTSFQRVFKVTDQCLMGVSGLGTDVQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL----DNEGK 124
L+ + +Y+ + ++M +L++ +LY KRF PY+ V+ GL D E K
Sbjct: 62 TFNSLMKFKLNMYRLKEGREMKSETFSKLVATSLYEKRFGPYFVSPVVAGLDKISDTEYK 121
Query: 125 GCVYTYDAVGSYERVG-YSSQGSGSTLI 151
+ TYD++G G + G+G+ L+
Sbjct: 122 PVICTYDSIGYRSNNGEFEVAGTGAELL 149
>gi|389860550|ref|YP_006362789.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525453|gb|AFK50651.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 205
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLA 75
GT + I + V A + RM+ ILS+ K+ + + + +G D+ L ++L
Sbjct: 10 GTVIGIKTSSGVVLAGEKRMTYDGFILSKSVRKLFPITEHTAVGFAGLTGDMNFLYRVLK 69
Query: 76 ARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
Y+ +H +++ ++ +LLS LY + FP + V+GG D ++ DAVGS
Sbjct: 70 TEAKNYELEHGREIKTRSLAKLLSIILYSYKLFPMLTEAVVGGFDE--APSLFVLDAVGS 127
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
Y++ GSGS L + ++ + PL EA +L +A ER
Sbjct: 128 LLEERYTALGSGSQLALSIIEQSYREDMPL-------------EEAKNLAVKAVLAAIER 174
Query: 196 DIYTANKLEIVVLNKDGIHRE 216
D+ + + ++++V+ ++GI E
Sbjct: 175 DVLSGDGVDVLVITREGIKSE 195
>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|74558522|sp|Q9V247.1|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380740969|tpe|CCE69603.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 197
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D + AADT+ S + + + + KII + D+ + ++G DV+ + ++L
Sbjct: 6 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 65
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A YQ + M+ AM LLSN L ++FPY ++GG +E + D +G
Sbjct: 66 EAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTIANLDPLG 123
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y++ GSG+ + L+ + L +A +L +A
Sbjct: 124 GLIFDDYTATGSGTPFAIAILEEGYRK-------------NLGIEKAKELAIKAVKAAGA 170
Query: 195 RDIYT-ANKLEIVVLNKDGIHREYMEL 220
RD+YT + K+++V + KDG+ E++ L
Sbjct: 171 RDVYTGSKKIQVVTITKDGMKEEFVTL 197
>gi|62318933|dbj|BAD94023.1| proteasome component C5 [Arabidopsis thaliana]
Length = 56
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/56 (75%), Positives = 47/56 (83%)
Query: 168 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
P QD+ TPLSEAEAVDLVKT FASATERDIYT +KLEI++L DGI E M+LRKD
Sbjct: 1 PKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 56
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 105/206 (50%), Gaps = 14/206 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AA+ R++ G+ LS K+ + D+ +AS+G AD++ + K+L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRITYGFYSLSSSGKKVYVVNDRMALASAGVIADMQTIAKIL 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+Y+ + ++ S AM +LLS ++ +R P+ + ++GG D EG ++ D VG
Sbjct: 68 RVNAKMYELESRRKPSIAAMAKLLSVIMFNRRIMPFIAEVLVGGYDEEGP-HIFVLDPVG 126
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ + + LD ++D + A++ ++ +A E
Sbjct: 127 SLIEDDYAALGTGAKMAISILDANY---------SKDVDVSGARKLAINAIR----AALE 173
Query: 195 RDIYTANKLEIVVLNKDGIHREYMEL 220
RD + +++V + DG+ E +++
Sbjct: 174 RDPVSGGGIDLVTVTADGVSEEEIKV 199
>gi|328875472|gb|EGG23836.1| proteasome subunit beta type 3 [Dictyostelium fasciculatum]
Length = 201
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG + + G + A D R + +S ++ K+ ++ DKC + SG D + L +
Sbjct: 4 NGGAVIVMTGKNCVAIATDLRFGIQHQTVSNNHPKVYRINDKCFIGISGLVTDAQTLYQK 63
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L RH +Y+ + + M+ + L+ N LY KRF PY++ V+ GLD + K + D +
Sbjct: 64 LVFRHNLYKLREERDMTPQVLSNLVGNMLYEKRFGPYFTEPVICGLDTQDKPFISGMDLI 123
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G+ S FL +P+ L ++E E + V C S+
Sbjct: 124 GA------------SVYTEDFLLVGTMTPAMYGLCETLYKKDMNEDELFETVSQCMLSSI 171
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ERD + E+ ++ +++ + R+D
Sbjct: 172 ERDAMSGWGAEVTIITPAKTYKKKLLARQD 201
>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 205
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 14/206 (6%)
Query: 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLA 75
GT V I +D V AA+ R++ G+++ SR K+ K+ D +AS G AD++ L K+
Sbjct: 10 GTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGIASIGILADMQVLTKIAK 69
Query: 76 ARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
A +Y + S + +LLS L+ R PY+ ++GG+D+EG ++ D++GS
Sbjct: 70 AYMSLYALDTKTRPSIRSAAKLLSYVLFANRVLPYFVEVLVGGVDDEGP-HLFIMDSLGS 128
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
Y++ G+G+ L + L++ K PS ++ EA +L + R
Sbjct: 129 LIEDDYAAVGTGTKLAIAILESNYK-PS------------MTVKEARELAIKAINQSISR 175
Query: 196 DIYTANKLEIVVLNKDGIHREYMELR 221
D + + ++I+ + +G E + L+
Sbjct: 176 DPVSGDGIDILTITGNGSAEETIPLQ 201
>gi|302348116|ref|YP_003815754.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
gi|302328528|gb|ADL18723.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
Length = 212
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V + DY V AAD R + G I SR KI+KL D M SG AD +AL
Sbjct: 18 HGTTTVGLIAGDYVVLAADKRATAGTLIASRTVKKIVKLTDYAAMTISGLVADAQALADA 77
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ Y+ K++S M LL+N L ++FPY ++GG D +Y D
Sbjct: 78 VREEARYYELDRGKRLSVYGMATLLANILSSSKYFPYLVQLIVGGYDTAPH--LYAIDPY 135
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G +S GSGS + + L+ K +S +AV+L SA
Sbjct: 136 GGVTEEKVTSTGSGSPVALGVLERGYKE-------------GISLDDAVNLAAEAIRSAI 182
Query: 194 ERDIYTANKLEIVVLNKDGIHREYM 218
RD T + +++ ++ + +++
Sbjct: 183 LRDSATGDGIDVTIIGRSTYQEKFI 207
>gi|17380265|sp|Q9P992.1|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
Length = 210
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A++ R + G+ I S+ K+ ++ D M ++G D + L +L+
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV- 133
+ +Y+ + ++ M+ + L+SN L R++P ++GG+D G G +Y+ DA+
Sbjct: 69 SVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPG-IYSLDAMG 127
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E S+ GSGS + L++Q + ++ E +DL +AT
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQYRE-------------NMTVKEGLDLAIRAIHNAT 174
Query: 194 ERDIYTANKLEIVVLNKDGIHR 215
+RD + +++VV+ K+ R
Sbjct: 175 KRDSASGENIDVVVITKEAFKR 196
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
Length = 210
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A++ R + G+ I S+ K+ ++ D M ++G D + L +L+
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV- 133
+ +Y+ + N+ M+ + L+SN L R++P ++GG+D G +Y+ DA+
Sbjct: 69 SVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDKNGP-AIYSLDAMG 127
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E S+ GSGS + L++Q K ++ E +DL +A
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQYKE-------------DIAVKEGLDLAIRAIHNAM 174
Query: 194 ERDIYTANKLEIVVLNKDGIHR---EYMELRKD 223
+RD + +++VV+ K+ R E ++ R+D
Sbjct: 175 KRDSASGENIDVVVITKEAFKRLDPEEVKSRRD 207
>gi|340344597|ref|ZP_08667729.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519738|gb|EGP93461.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 197
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I V A++ R++ G ++S+ K + K A +G AD++ L +
Sbjct: 7 GATAVGITFNGGIVLASEKRIAFGNFLVSKSSKKTFSITSKVGAACAGLVADMQILTLQI 66
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
AA I + + + + + +++SN +Y +R+FP + ++GG+ + K +YT D +G
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVD--KPILYTLDPLG 124
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ + + LD Q K P+ +++ EA+DL K SA
Sbjct: 125 SVLPDEYAAVGTGAEMALGVLDPQFK-PN------------MTQEEAIDLAKRAVRSAAL 171
Query: 195 RDIYTANKLEIVVLNKDGIHREYME 219
RD + + L+I+V+ KDG +E+ E
Sbjct: 172 RDSASGDGLDILVVTKDG-TKEFTE 195
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 196
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I D V AADT+ S + + + + KII + D+ + ++G DV+ L +
Sbjct: 4 KTGTTTVGIKVKDGVVLAADTQASLDHMVETLNIKKIIPITDRIAITTAGSVGDVQMLAR 63
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
L A Y + M+ AM LLSN L R+FPY ++GG +E + D
Sbjct: 64 YLEAEARYYYFTWGRPMTTKAMANLLSNILNENRWFPYLVQIIIGGYVDE--PTIANLDP 121
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G Y++ GSG+ + L+ + L+ EA +L +A
Sbjct: 122 FGGLIFDDYTATGSGTPFAIAVLEEGYRE-------------DLTIEEAKELAIRAVRAA 168
Query: 193 TERDIYT-ANKLEIVVLNKDGIHREYM 218
RD+YT + K+++V + KDG+ E++
Sbjct: 169 GRRDVYTGSKKVQVVTITKDGMKEEFV 195
>gi|14590176|ref|NP_142241.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|74570532|sp|O57983.1|PSB1_PYRHO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|3256634|dbj|BAA29317.1| 197aa long hypothetical proteasome beta subunit [Pyrococcus
horikoshii OT3]
Length = 197
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D + AADT+ S + + + + KII + D+ + ++G DV+ + ++L
Sbjct: 6 GTTTVGIKVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 65
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A Y + M+ AM LLSN L ++FPY ++GG +E + D G
Sbjct: 66 EAEARYYYFAWGRPMTTKAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTIANLDPYG 123
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y++ GSG+ + L+ K L EA +L +A
Sbjct: 124 GLIFDNYTATGSGTPFAIAILEEGYKE-------------NLGIEEAKELAIKAIKAAGS 170
Query: 195 RDIYT-ANKLEIVVLNKDGIHREYMEL 220
RD+YT + K+++V + K+G+ E+++L
Sbjct: 171 RDVYTGSKKVQVVTITKEGMQEEFIKL 197
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I V AAD R + G I+ + KI+K++D M ++G AD + L +L
Sbjct: 13 GTTTVGIRSEKAVVLAADKRATAGNFIVHKRVEKIVKISDYMAMTTAGLVADAQVLADVL 72
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
Y+ H K+MS A LSN L+ RF+PY ++GG D + +Y+ D G
Sbjct: 73 RMEVKNYELFHKKRMSVKAAATFLSNVLHSARFYPYIVQLLVGGFDTAPR--LYSLDWFG 130
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
+ + GSGS + + ++ + P D E V+L +AT
Sbjct: 131 TVAEEEFLVTGSGSPMAVGVIEAEYN-------PNMDL------EELVNLAVRAVFAATR 177
Query: 195 RDIYTANKLEIVVLNKDGIHREYMEL 220
RD + +++ V++++GI + L
Sbjct: 178 RDTASGEGIDVAVIDRNGITMRHYRL 203
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D V A + R + G I SR KI ++AD+ M ++G D + L +L
Sbjct: 11 KGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYRIADRVAMTTAGAVGDAQFLARL 70
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
++ +Y+ + ++ + A+ LLSN L R+FPY+ ++GG+D G +Y+ D +
Sbjct: 71 ISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRWFPYFVQLLVGGVDKRGP-SIYSIDLL 129
Query: 134 -GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFAS 191
G+ E + + GSGS L +D TP ++ + V+L S
Sbjct: 130 GGAIEEIDIVATGSGSPTAYGVL--------------EDRYTPEITVDDGVELAVRAIYS 175
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A RD + + +++V + KDG Y EL K+
Sbjct: 176 AMRRDSASGDGIDVVKITKDG----YFELSKE 203
>gi|17380218|sp|Q9N9W8.1|PSB3_GIALA RecName: Full=Proteasome subunit beta type-3
gi|9367751|emb|CAB97490.1| 20S proteasome subunit [Giardia intestinalis]
Length = 207
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILS-RDYSKIIKLADKCVMASSGFQADVKA 69
++ NG + I G D AAD R+ Y L+ + +I +L+ C++ +G Q DV
Sbjct: 5 WEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLT 64
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
+ + + +Y Q ++++ A +++S+ LY RF PY+ ++ G + +GK +
Sbjct: 65 TYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGA 124
Query: 130 YDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
D +G + + G+ S ++ + +K +SE E + L++
Sbjct: 125 MDTIGCLDDCTNFQIAGTASDFLLGLCETHVKP-------------DMSEDEILPLMEQI 171
Query: 189 FASATERDIYTANKLEIVVLNKDG 212
SAT RD Y+ +VVL +DG
Sbjct: 172 IRSATNRDAYSGWGAHVVVLRRDG 195
>gi|159110825|ref|XP_001705654.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
gi|157433742|gb|EDO77980.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
Length = 207
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILS-RDYSKIIKLADKCVMASSGFQADVKA 69
++ NG + I G D AAD R+ Y L+ + +I +L+ C++ +G Q DV
Sbjct: 5 WEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLT 64
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
+ + + +Y Q ++++ A +++S+ LY RF PY+ ++ G + +GK +
Sbjct: 65 TYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGA 124
Query: 130 YDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
D +G + + G+ S ++ + +K +SE E + L++
Sbjct: 125 MDTIGCLDDCTNFQIAGTASDFLLGLCETHVKP-------------DMSEDEILPLMEQI 171
Query: 189 FASATERDIYTANKLEIVVLNKDG 212
SAT RD Y+ +VVL +DG
Sbjct: 172 IRSATNRDAYSGWGAHVVVLRRDG 195
>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 209
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLA 75
GT + + ++ V AA+ R+S +LSR+ KI + D + +G DV L K+L
Sbjct: 8 GTAIGLKTSEGVVLAAEKRLSYDGFVLSRNARKIHMVTDHVGVGFAGLMGDVGFLVKVLR 67
Query: 76 ARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
Y+ QH +++ +M +LLS LY + P + V+GG D+EG +Y D VGS
Sbjct: 68 LEAKNYELQHGREIRARSMAKLLSLILYNYKLAPMLTEVVVGGFDDEGP-SLYILDPVGS 126
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
Y + GSG+ L + +++ + SPS L AEA +L + ER
Sbjct: 127 LIEEKYVAVGSGAQLALGYIEPRY-SPSITL------------AEAEELAVNAIRTVVER 173
Query: 196 DIYTANKLEIVVLNKDG 212
D+ + + +++ + + G
Sbjct: 174 DVLSGDGIDLATITRSG 190
>gi|253744760|gb|EET00912.1| Proteasome subunit beta type 3 [Giardia intestinalis ATCC 50581]
Length = 207
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILS-RDYSKIIKLADKCVMASSGFQADVKA 69
++ NG + I G D AAD R+ Y L+ +I +L+ C++ +G Q DV
Sbjct: 5 WEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDVLT 64
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
+ + + +Y Q ++++ A +++S+ LY RF PY+ ++ G + +GK +
Sbjct: 65 TYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGA 124
Query: 130 YDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
D +G + + G+ S ++ + +K +SE E + L++
Sbjct: 125 MDTIGCLDDCTNFQIAGTASDFLLGLCEAHIKP-------------DMSEEEILPLMEQI 171
Query: 189 FASATERDIYTANKLEIVVLNKDG 212
SAT RD Y+ +VVL +DG
Sbjct: 172 IRSATNRDAYSGWGAHVVVLRRDG 195
>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 211
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A++ R+S G I+S+ K+ K+ D+ +A +G AD++AL ++L
Sbjct: 9 GATTVGIRVKDGVVLASEKRVSYGGFIVSKAGKKVFKVTDRIGIAFAGLYADMQALARIL 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A Y+ K A +LLSN LY + P+ + ++GG+D G +Y D VG
Sbjct: 69 SAEIQYYEVSTGKPARVYAAAKLLSNILYASKLIPFITEVLVGGVDETGS-HLYVMDPVG 127
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ GSG+ + + L+ + +S EA +L + A E
Sbjct: 128 SVIEDDYAALGSGAAIAIGILEANYRK-------------DMSIDEAKELAEKAVRIAIE 174
Query: 195 RDIYTANKLEIVVLNK-DG 212
RD + + ++I+V+ + DG
Sbjct: 175 RDAISGDGIDILVIKRVDG 193
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A++ R + G+ I S+ K+ ++ D M ++G D + L +L+
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV- 133
+ +Y+ + N+ M+ + L+SN L R++P ++GG+D G +Y+ D +
Sbjct: 69 SVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDKNGP-AIYSLDPMG 127
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E S+ GSGS + L++Q + ++ E +DL +AT
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQYRE-------------DIAVKEGLDLAIRAIHNAT 174
Query: 194 ERDIYTANKLEIVVLNKDGIHR 215
+RD + +++VV+ K+ R
Sbjct: 175 KRDSASGENIDVVVITKEAFKR 196
>gi|407464585|ref|YP_006775467.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407047773|gb|AFS82525.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 194
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I V A++ R++ G ++S+ K + +K +G AD++ L +
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKSTKKTFPITNKVGATCAGLVADMQILTLQI 62
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
AA I + + + + + +++SN +Y +R+FP + ++GG+ + K +YT D +G
Sbjct: 63 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLG 120
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ + + LD Q K P+ +++ EAVDL K +A
Sbjct: 121 SVLPDEYAAVGTGAEMALGVLDPQFK-PN------------MTKDEAVDLAKRAVRAAAL 167
Query: 195 RDIYTANKLEIVVLNKDGIHREYME 219
RD + + L+I+V+ KDG EY E
Sbjct: 168 RDSASGDGLDILVITKDGTE-EYSE 191
>gi|308160496|gb|EFO62983.1| Proteasome subunit beta type 3 [Giardia lamblia P15]
Length = 207
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILS-RDYSKIIKLADKCVMASSGFQADVKA 69
++ NG + I G D AAD R+ Y L+ +I +L+ C++ +G Q DV
Sbjct: 5 WEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDVLT 64
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
+ + + +Y Q ++++ A +++S+ LY RF PY+ ++ G + +GK +
Sbjct: 65 TYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGA 124
Query: 130 YDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
D +G + + G+ S ++ + +K +SE E + L++
Sbjct: 125 MDTIGCLDDCTNFQIAGTASDFLLGLCETHVKP-------------DMSEDEILPLMEQI 171
Query: 189 FASATERDIYTANKLEIVVLNKDG 212
SAT RD Y+ +V+L +DG
Sbjct: 172 IRSATNRDAYSGWGAHVVILRRDG 195
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
fermentans DSM 16532]
gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
fermentans DSM 16532]
Length = 202
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 18/199 (9%)
Query: 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLA 75
GT + + ++ V A++ R++ +LSR+ KI + + + +G DV L K+L
Sbjct: 8 GTAIGLKTSEGVVLASEKRLTYDGFVLSRNARKIHMITNHIGVGFAGLMGDVNFLVKVLR 67
Query: 76 ARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
Y+ QH +++ ++ +LLS LY + P + V+GG D EG +Y D VGS
Sbjct: 68 LEAKNYELQHGREIKTRSLAKLLSVILYSYKLAPMLTEVVVGGYDEEGP-SLYILDPVGS 126
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE--AVDLVKTCFASAT 193
Y + GSG+ L + +++ P + L EAE AV+ VKT
Sbjct: 127 VIEEKYVAVGSGAQLALGYIE-----------PRYNPGLGLKEAEELAVNAVKTVI---- 171
Query: 194 ERDIYTANKLEIVVLNKDG 212
ERD+ + + +++VV++K+G
Sbjct: 172 ERDVLSGDGIDLVVIDKNG 190
>gi|352683092|ref|YP_004893616.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275891|emb|CCC82538.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 199
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V I D V AAD R++ GY I + KI K+ + SG AD++ L +L+
Sbjct: 3 TTVGIKARDGVVLAADKRVTAGYYIAHKRGEKIWKIDEHVAATMSGGVADLQGLLNILSI 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
+ Y+ +H + + + S L+Y R F Y +++GG D+EG +Y D +GSY
Sbjct: 63 QAREYRSEHGRPIPIKTLVNYASLVLFYSRPFIYLVHSIIGGYDDEGP-QLYMLDWLGSY 121
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
Y + GSGS M L+ + +S EA+ + + +A D
Sbjct: 122 SSERYIATGSGSPYAMGVLEVNYRD-------------DISIDEAIKVAENAVKAAMRND 168
Query: 197 IYTANKLEIVVLNKDGIHR 215
+ ++IVV+ K+G R
Sbjct: 169 PGSGEGIDIVVITKEGFRR 187
>gi|281209309|gb|EFA83482.1| p21-activated protein kinase [Polysphondylium pallidum PN500]
Length = 1404
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG + + G D A D R ++ +S + K+ +++DKC + SG D + L +
Sbjct: 7 NGGAVIVMTGKDCVAIATDLRFGIQHTTVSTNNPKVYRISDKCFIGISGLVTDAQTLYQK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L RH +Y+ + + MS + L+SN LY KRF PY++ V+ GLD+ K + D +
Sbjct: 67 LVFRHNLYKLKEERDMSPQVLTNLVSNMLYEKRFGPYFTEPVICGLDSNNKPFISGMDLI 126
Query: 134 GS 135
G+
Sbjct: 127 GA 128
>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
Length = 207
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I + V A + R + G I SRD KI KL D M +G D + L ++L
Sbjct: 8 GTTTVGIICNNGVVFATERRATMGTFIASRDAQKIYKLTDNIAMTIAGSVGDGQRLARIL 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+++ + + MS A+ LLSN L ++ P+Y ++GG+D G +Y+ D +G
Sbjct: 68 QVEAKLFELRRHGPMSINALSMLLSNILAETKYMPFYVQVLIGGVDKSGP-RIYSLDPLG 126
Query: 135 S-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E V +SS GSGS + L+++ K +S + V+L SA
Sbjct: 127 GRIEEVKFSSTGSGSPIAYGVLEDRYKP-------------DISVEQGVELAAKALESAM 173
Query: 194 ERDIYTANKLEIVVLNKD 211
+RD + N ++ V+ +
Sbjct: 174 KRDSASGNGMQFAVITHE 191
>gi|19075485|ref|NP_587985.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380272|sp|Q9Y7T8.1|PSB3_SCHPO RecName: Full=Probable proteasome subunit beta type-3
gi|4539605|emb|CAB40016.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe]
Length = 204
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+CVA+AG + A+D R+ L+ ++ K+ + DK + +G DV+ L +L
Sbjct: 7 NGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDVQTLYEL 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ + +Q+ L+S+TLY KRF PY+SF V+ G+ N+ + +D++
Sbjct: 67 FRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFICGFDSI 126
Query: 134 G 134
G
Sbjct: 127 G 127
>gi|159476310|ref|XP_001696254.1| hypothetical protein CHLREDRAFT_187099 [Chlamydomonas reinhardtii]
gi|158282479|gb|EDP08231.1| predicted protein [Chlamydomonas reinhardtii]
Length = 204
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S + NG VA+AG + +D R ++ D K+ K+ DK + SG Q D
Sbjct: 2 SIFSYNGAAIVAMAGKECVAIGSDLRFGVQLQTMTCDTPKVYKIHDKLYLGLSGLQTDAT 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +Y+ + + M G +LSN LY +RF PY++ V+ GL+ +G +
Sbjct: 62 TLHQKLQFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPDGTPYLC 121
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA-EAVDLVK 186
D +G+ E + G+ SP L + P E E + V
Sbjct: 122 GMDTIGAIESAKDFMITGT--------------SPESLYGMCESMWRPDMEPDELFETVA 167
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
C S +RD + V+ KD + ++ R D
Sbjct: 168 QCLMSGCDRDALAGWGAVVHVITKDKVVSRTLKTRMD 204
>gi|118575464|ref|YP_875207.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|302595701|sp|A0RU86.1|PSB1_CENSY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|118193985|gb|ABK76903.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 193
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 103/198 (52%), Gaps = 15/198 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I A + A++ R++ G ++S++ K ++ A +G AD++ L +
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A I + + + ++ +++SN +Y +RFFP + ++GG+ G+ +YT D++G
Sbjct: 63 SALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGV--VGEPAIYTLDSLG 120
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ + + LD Q KS +SE +AVDL SA
Sbjct: 121 SVLPDEYAAVGTGAEMALGVLDPQFKS-------------GMSEKDAVDLAVRGIRSAAL 167
Query: 195 RDIYTANKLEIVVLNKDG 212
RD ++ + L+I+ L+ +G
Sbjct: 168 RDSFSGDGLDILALDANG 185
>gi|337285369|ref|YP_004624843.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334901303|gb|AEH25571.1| proteasome, subunit beta [Pyrococcus yayanosii CH1]
Length = 197
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I + V AADT+ S + + + + KII + D+ + ++G DV+ L +
Sbjct: 4 KTGTTTVGIRVDEGVVLAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMLAR 63
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L YQ + MS AM LLSN L ++FPY V+GG E + D
Sbjct: 64 ILEVEARYYQFTWGRPMSTRAMANLLSNILNENKWFPYLVQIVIGGYVEE--PVIANLDP 121
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G Y++ GSGS + L++ + + EA +L A
Sbjct: 122 LGGLIFDDYTATGSGSPFAIAVLEDGYRKDMGI-------------EEAKELAVKAVKVA 168
Query: 193 TERDIYT-ANKLEIVVLNKDGIHREY 217
+RD+YT + K+++V + K+G+ REY
Sbjct: 169 GKRDVYTGSRKVQVVTITKEGM-REY 193
>gi|347522768|ref|YP_004780338.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459650|gb|AEM38086.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 209
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V + +Y V AAD R + GY I + KI+K+ D M +SG AD + L +
Sbjct: 16 ETGTTTVGLKLREYVVLAADRRATAGYYIAHKKTRKIVKITDYMAMTTSGLVADAQVLAE 75
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L Y+ ++ S A +L+ ++ R +PY +LGG D + ++ D
Sbjct: 76 ILREELRYYELTTKRKPSVAAAANMLAAIIFSARMYPYIVQLLLGGYDTAPR--LFNIDW 133
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G+ Y++ GSGS + + +++ + + EAV+L +A
Sbjct: 134 LGTVTEEKYTATGSGSPIAIGVIESGYRE-------------DMKVDEAVELAVKAVRAA 180
Query: 193 TERDIYTANKLEIVVLNKDG-IHREY 217
ERD+ T N +++V++ K I REY
Sbjct: 181 MERDVATGNGIDVVIIGKGTFITREY 206
>gi|344232930|gb|EGV64803.1| proteasome-domain-containing protein [Candida tenuis ATCC 10573]
gi|344232931|gb|EGV64804.1| hypothetical protein CANTEDRAFT_113576 [Candida tenuis ATCC 10573]
Length = 205
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG+ VA+ G D A D R+ + L+ ++ KI + DK ++ +G DV
Sbjct: 4 PSSINGGSAVAMVGKDCVAIACDLRLGSQSLGLANNFEKIFTINDKVMLGLTGLATDVTT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
L ++ ++ +Y+ + +++ L+S+TLY KRF PY+ V+ GL+ E K +
Sbjct: 64 LNEVFRFKNNLYELREERKIEPQTFANLVSSTLYEKRFGPYFCGPVVAGLNKENKPFICG 123
Query: 130 YDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+D +G + + G+ S + ++ L P+ L A D +S+A
Sbjct: 124 FDLIGCIDFAKDFIVSGTASEQLYGMCES-LYEPN---LEADDLFETISQA--------- 170
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + V+ KD + + ++ R+D
Sbjct: 171 LLNAADRDTMSGWGAVVYVVTKDSVTKRVLKTRQD 205
>gi|386876203|ref|ZP_10118332.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386805984|gb|EIJ65474.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 194
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I V A++ R++ G ++S+ K + + +G AD++ L +
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKSTKKTFPITSQVGATCAGLVADMQILTLQI 62
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
AA I + + + + + +++SN +Y +R+FP + ++GG+ + K +YT D +G
Sbjct: 63 AALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLG 120
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ + + LD Q K P+ +S+ EA+DL K SA
Sbjct: 121 SVLPDEYAAVGTGAEMALGVLDPQYK-PN------------MSKDEAIDLAKRAVRSAAL 167
Query: 195 RDIYTANKLEIVVLNKDGIHREYME 219
RD + + ++I+V+ KDGI E+ E
Sbjct: 168 RDSASGDGIDILVITKDGIE-EFTE 191
>gi|219851431|ref|YP_002465863.1| proteasome beta-type subunit [Methanosphaerula palustris E1-9c]
gi|302595895|sp|B8GG66.1|PSB_METPE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|219545690|gb|ACL16140.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
palustris E1-9c]
Length = 211
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T + I D + A + R + G I S+ K+ ++AD+ M ++G D + L ++
Sbjct: 8 KGTTTIGIVFKDGIILATEKRATMGSMIASKRAKKVYQVADRIGMTTAGGVGDAQQLARI 67
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
++ +YQ + + +S A LLSN L R +PYY ++GG+D G VY+ DA+
Sbjct: 68 MSVECNLYQIRRGRSISVGASSTLLSNYLNQNRGYPYYVQLLVGGVDATGP-SVYSVDAM 126
Query: 134 GSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G R + GSGS + L+++ K L+E EA++L +A
Sbjct: 127 GGATRESDIVATGSGSPMAYGVLEDRYKK-------------DLTEDEAIELAIRALRAA 173
Query: 193 TERDIYTANKLEIVVLNKDGIHREYMELRKD 223
RD + + +V++ KD Y EL ++
Sbjct: 174 MRRDSASGEGIHVVIITKDA----YSELSEE 200
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D + A D R S G + ++ K+ K+ D + +G D +A+ +LL
Sbjct: 6 GTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAIVRLL 65
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + K +S A LLSN L+ R+FP+ + ++GG D +++ D +G
Sbjct: 66 TAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGAKLFSLDPLG 125
Query: 135 SY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E +++ GSGS + L+ P+ E + L SA
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEAGYDRDMPV-------------EEGIKLALKALKSAM 172
Query: 194 ERDIYTANKLEIVVLNKDGIH 214
ERD Y+ N + + V+ K+G+
Sbjct: 173 ERDTYSGNGISLAVITKEGVK 193
>gi|67481017|ref|XP_655858.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56473029|gb|EAL50477.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407034951|gb|EKE37462.1| proteasome subunit beta type 3, putative [Entamoeba nuttalli P19]
gi|449704564|gb|EMD44784.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 205
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+GG V +AG AAD R Y S ++ K+ ++ C+ +G +DV+ + +
Sbjct: 9 SGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEK 68
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ + + + ++ LY KRF PYY ++ G+D+ G V +YD +
Sbjct: 69 VKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYI 128
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E G+GS +M D+ K + + P E V+ V C +A
Sbjct: 129 GSPEISQVGCVGTGSNELMGMCDSFYK----------EGMEP---EELVEAVGQCLLAAE 175
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
RD ++ +E+ +L +D + M+ R+D
Sbjct: 176 NRDAFSGWGVEVYLLTRDNLTIYNMKPRQD 205
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T + + D + AAD R S G I ++ KI K+ D + +G D ++L +
Sbjct: 4 KGTTTIGLICKDAVILAADKRASLGNLIADKNAKKIYKIDDNLALTIAGSVGDAQSLVRY 63
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + K MS A LLSN L+ R+FP+ ++GG D +G +Y+ D +
Sbjct: 64 LTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQMIVGGFDEKGFK-LYSLDPL 122
Query: 134 GSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G E +++ GSGS + L+ K + + V LV +A
Sbjct: 123 GGVNEEKDFTATGSGSPIAYGVLEAGYKK-------------DMDYKKGVSLVLKALQAA 169
Query: 193 TERDIYTANKLEIVVLNKDGIH 214
ERD ++ N + + ++ KDG+
Sbjct: 170 MERDTFSGNGVSLALITKDGVK 191
>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 210
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V AAD+R + I S + K+ K+ + M +G D + L ++L
Sbjct: 12 GTTTVGLVCTDGVVIAADSRATMDTFIASTEARKVWKIDENLGMTIAGLVGDAQELIRIL 71
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
++ IY+ KQMS + LLS L + P+Y ++GG+++ GKG VY DA G
Sbjct: 72 KIQNEIYKMNERKQMSPRSAATLLSIILQENKMMPFYVQLIVGGVED-GKGYVYNLDAAG 130
Query: 135 SY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
Y + +++ GSGS + +L++ K P L+ +A+ + A
Sbjct: 131 GYTQESRFTATGSGSLTALGYLEDSYK-------PG------LTTKDAIKIAAKALLIAM 177
Query: 194 ERDIYTANKLEIVVLNKDGIHREYME 219
+RD T N + I + G + EY +
Sbjct: 178 QRDSATGNNMTIAAITSRG-YEEYTQ 202
>gi|388491852|gb|AFK33992.1| unknown [Lotus japonicus]
Length = 204
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK +A SG D +
Sbjct: 2 SIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL +E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|389851755|ref|YP_006353989.1| proteasome subunit beta [Pyrococcus sp. ST04]
gi|388249061|gb|AFK21914.1| proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 197
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I D V AADT+ S + + + + KII + D+ + ++G DV+ L +
Sbjct: 4 KTGTTTVGIKVKDGVVLAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQVLAR 63
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+L A Y + MS AM LLSN L ++FPY ++GG +E + D
Sbjct: 64 ILEAEARYYYFTWGRPMSTKAMANLLSNILNEHKWFPYLVQIIIGGYVDE--PTIANLDP 121
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G Y++ GSG+ + L+ + L +A +L +A
Sbjct: 122 FGGLIFDDYTATGSGTPFAIAVLEEGYRK-------------NLGIEKAKELAIKAVRAA 168
Query: 193 TERDIYT-ANKLEIVVLNKDGIHREYM 218
+RD+YT + K+++V + K+G+ E++
Sbjct: 169 GKRDVYTGSKKVQVVTITKEGMKEEFV 195
>gi|167393450|ref|XP_001740580.1| proteasome subunit beta type-3 [Entamoeba dispar SAW760]
gi|165895272|gb|EDR23004.1| proteasome subunit beta type-3, putative [Entamoeba dispar SAW760]
Length = 205
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+GG V +AG AAD R Y S ++ K+ ++ C+ +G +DV+ + +
Sbjct: 9 SGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEK 68
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ + + + ++ LY KRF PYY ++ G+D+ G V +YD +
Sbjct: 69 VKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYI 128
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E G+GS +M D+ K + + P E V+ V C +A
Sbjct: 129 GSPEISRVGCVGTGSNELMGMCDSFYK----------EGMEP---EELVEAVGQCLLAAE 175
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
RD ++ +E+ +L +D + M+ R+D
Sbjct: 176 NRDAFSGWGVEVYLLTRDNLTIYNMKPRQD 205
>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485700|dbj|BAJ51354.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 201
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + I G D V AA+ R + GY ++S+ K+ K+++ A +G AD++ + K +
Sbjct: 9 GATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMIKEV 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + S + ++LS L+ R+FPY+ ++GG+D++G V D +G
Sbjct: 69 TAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGP-HVIVLDPLG 127
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ G+G+ + + ++N + +S E DL ++
Sbjct: 128 SMIEDDYAVVGTGAEVAVGVIENLYRK-------------DMSATEIRDLATKAIKASIA 174
Query: 195 RDIYTANKLEIVVLNKDGIHRE 216
RD + N +++++ + G+ E
Sbjct: 175 RDAGSGNGIDLLLYTQKGLEAE 196
>gi|407462234|ref|YP_006773551.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045856|gb|AFS80609.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 194
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 16/208 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I V A++ R++ G ++S+ K + K +G AD++ L +
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 62
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
AA I + + + + + +++SN +Y +R+FP + ++GG+ + K +YT D +G
Sbjct: 63 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLG 120
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ + + LD Q K P+ +++ EA+DL K +A+
Sbjct: 121 SVLPDEYAAVGTGAEMALGVLDPQFK-PN------------MTKDEAIDLAKRAVRAASL 167
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELRK 222
RD + + L+I+V+ KDG E+ E K
Sbjct: 168 RDSASGDGLDILVITKDGTE-EFTEAIK 194
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D V A + R + G I S+ KI K+ + M ++G D + L ++
Sbjct: 10 KGTTTVGLIFKDGVVLATEMRATMGNLIASKRAKKIYKITPRIGMTTAGGVGDAQQLVRI 69
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ + + MS A LLSN L R++PYY ++GG D EG VY+ DA+
Sbjct: 70 IQVECSLYEMRRGRTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFD-EGGPSVYSVDAM 128
Query: 134 GSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G R + GSGS L++Q + ++E EA DL SA
Sbjct: 129 GGATREEEIVATGSGSPFAYGVLEDQYRP-------------DMTEEEAKDLAIRAVRSA 175
Query: 193 TERDIYTANKLEIVVLNKD 211
RD + + +VV+ KD
Sbjct: 176 MRRDAGSGENIMVVVIMKD 194
>gi|449464176|ref|XP_004149805.1| PREDICTED: proteasome subunit beta type-3-A-like [Cucumis sativus]
Length = 204
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ KI ++ DK + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL +E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLSDEDKPFIC 121
Query: 129 TYDAVGSYE 137
T D++G+ E
Sbjct: 122 TMDSIGAKE 130
>gi|302774543|ref|XP_002970688.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
gi|300161399|gb|EFJ28014.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
Length = 239
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + AD V AD+R +TG + +R KI KL D + SG AD + + +
Sbjct: 17 GTTIIGVEYADGVVLGADSRTTTGIYVANRASDKISKLTDNVYICRSGSAADTQVISDYV 76
Query: 75 AARHLIYQHQ--HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
R+L++QH +Q + A +L+ Y + F ++GG D KG ++
Sbjct: 77 --RYLLHQHTIVLGEQATVKAAAKLVREIAYSNKSFLEAGM-IVGGWDKHEKGSIFGVPI 133
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G+ RV ++ GSGST I FLD + P +S+ EA DLV + A
Sbjct: 134 GGTLLRVPFTIGGSGSTYIFGFLDQAWR-------PG------MSKQEAQDLVVKAVSLA 180
Query: 193 TERDIYTANKLEIVVLNKDGIHREYM 218
RD + + V ++ +G+ R+Y
Sbjct: 181 MARDGGSGGVVRTVTISSEGVTRDYF 206
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + D V A D R + G I ++ K+ K+ D M +G D ++L +++
Sbjct: 13 GTTTIGMVCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLVRMI 72
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A IY+ + M + LLSN L+ R FP+ + ++GG DN +++ D VG
Sbjct: 73 SAETKIYKMRTGNNMPPHSCATLLSNILHGNRHFPFLTQLIIGGYDNLHGPKLFSLDPVG 132
Query: 135 SY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E ++S GSGS + L+ + K ++ + +L SA
Sbjct: 133 GLNEETSFTSTGSGSPTALGVLEAEYKK-------------DMTINKGKELAVKALISAM 179
Query: 194 ERDIYTANKLEIVVLNKDGI 213
ERD Y+ N + + V++++G+
Sbjct: 180 ERDAYSGNGISLAVIDENGV 199
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I V A++ R + GY I ++ KI ++A + + ++G D + L +L+
Sbjct: 10 GTTTVGIVFETGVVLASEKRATMGYLISNKTAKKIYQIAPRIGLTTAGGVGDAQQLARLM 69
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+Y+ + K++S A LLSN L+ R FP+Y ++GG+D G +++ DAVG
Sbjct: 70 TVEANLYEIRRGKRISVQAASTLLSNILHGNRMFPFYVQLLIGGVDETGP-VLFSVDAVG 128
Query: 135 SYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
+ G + GSGS + L+++ + E A++L SA
Sbjct: 129 GTGKEDGIVATGSGSPMAYGVLEDRY-------------TLGMDERSAIELAIRALRSAI 175
Query: 194 ERDIYTANKLEIVVLNKDGIH 214
+RD + + +VV+ +D H
Sbjct: 176 KRDAGSGEGVAVVVITEDSYH 196
>gi|213409155|ref|XP_002175348.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
gi|212003395|gb|EEB09055.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
Length = 204
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%), Gaps = 14/211 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+C+A+ G + A+D R+ L+ ++ KI + +K + +G DV+ L +L
Sbjct: 7 NGGSCIAMVGKECVAIASDLRLGAQSVSLTNNFPKIFSMTEKTYLGLTGLATDVQTLHEL 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ + +Q+ L+S+TLY KRF PY++F ++ GL + + +D++
Sbjct: 67 FRYKINMYKLREERQIEPKTFANLVSSTLYEKRFAPYFTFPIVAGLSKTNEPFICGFDSI 126
Query: 134 GSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G + ++ G+ S + ++ L P L +D +S+A +A
Sbjct: 127 GCIDFAKDFAVSGTASDHLYGICED-LYEPD---LEPEDLFETISQA---------LLNA 173
Query: 193 TERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+RD + + V++KD + ++ R+D
Sbjct: 174 IDRDCISGWGCVVYVISKDKCMKRLVKGRQD 204
>gi|388521659|gb|AFK48891.1| unknown [Lotus japonicus]
Length = 204
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK + SG D +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAVASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S+ LY KRF PY+ V+ GL +E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSSILYEKRFGPYFCQPVIAGLGDEDKPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D + A D R S G I ++ K+ K+ D M +G D +A+ + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRAL 65
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + K +S A LLSN L+ R FP+ + ++GG D +++ D +G
Sbjct: 66 IAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDLTDGPKLFSLDPLG 125
Query: 135 SY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E ++S GSGS + L+ + +S E + L SA
Sbjct: 126 GMNEEKTFTSTGSGSPIAYGVLEAEYDR-------------DMSIEEGLKLALKALKSAM 172
Query: 194 ERDIYTANKLEIVVLNKDGIH 214
ERD Y+ N + + V+ K+G+
Sbjct: 173 ERDTYSGNGVSVAVITKEGVK 193
>gi|335345796|gb|AEH41478.1| proteasome component Pup3 [Endocarpon pusillum]
Length = 206
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+D NGG CVA+ G A D R+ +S ++ KI + A C + +G DV
Sbjct: 3 SPFDINGGACVAMVGKGCVAIACDLRLGLQSLTVSNNFPKIFQYAPSCYLGLTGLATDVS 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
+ L R +Y+ + + +S + L+S++LY +RF PY+ VL G+++ GK +
Sbjct: 63 TVSDLFRYRVNMYRLREERNISPQTLANLVSSSLYERRFGPYFVSPVLAGINHTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S D + L P L E + V
Sbjct: 123 CGFDSIGCIDFAKDFIVGGTAS-------DQLFGTCEGLWEP------DLEPDELFETVS 169
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 170 QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|66358224|ref|XP_626290.1| possible proteasome component [Cryptosporidium parvum Iowa II]
gi|46228012|gb|EAK88932.1| possible proteasome component [Cryptosporidium parvum Iowa II]
Length = 204
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRM-STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
NGG +A+ G + A D R+ S GY +S D+ K+I+ + K +M SG D+ L
Sbjct: 6 NGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDIHTLTN 65
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
L+ + +Y + +++ A+ + ++ LY KRF PY+ ++ GLDN + YD
Sbjct: 66 LIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGYDL 125
Query: 133 VGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFA 190
+G ++ G+ DNQL + P L E +++V C
Sbjct: 126 IGCLSVCSEFAISGTA--------DNQLFG------ICESYYRPDLEPDELMEIVSQCML 171
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
S +RD ++ ++ +L + + + ++ R D
Sbjct: 172 SGIDRDAFSGWGCKVYLLTPEKLVTKTLKSRMD 204
>gi|119175342|ref|XP_001239915.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303314835|ref|XP_003067426.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107094|gb|EER25281.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320037775|gb|EFW19712.1| proteasome component PUP3 [Coccidioides posadasii str. Silveira]
gi|392870109|gb|EAS27268.2| proteasome component PUP3 [Coccidioides immitis RS]
Length = 206
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+D NGG CVA+ G D A D R+ +S ++ KI A + +G DV
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVA 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
++ LL + +Y+ + +Q++ + L+S++LY KRF P++ VL G+++ GK +
Sbjct: 63 SVSDLLRYKVNLYRLREERQIAPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + L P L +D +S+A
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGMCEG-LWEPD---LGPEDLFETISQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 --LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|167044620|gb|ABZ09292.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG7F19]
Length = 199
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I + V A++ R++ G ++S+ K + + A +G AD++ L +
Sbjct: 8 GATAVGITYDEGVVFASERRIAYGNFVVSKTTKKTFVITPQVGAACAGLVADMQILSLQI 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A I + + +++ + +++SN +Y +RFFP + ++GGL + K +YT D +G
Sbjct: 68 SALAKIRKMEIKREVPPNTIAKMMSNMMYERRFFPLLTQVIVGGLVD--KPVIYTLDPLG 125
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ + + LD Q K L+E EA DL +A
Sbjct: 126 SVLPDDYAAVGTGAEMALGILDQQYKK-------------ELNETEATDLAVKSIRAAIL 172
Query: 195 RDIYTANKLEIVVLNKDG 212
RD + + ++++V+NK G
Sbjct: 173 RDSASGDNIDVLVINKYG 190
>gi|224063046|ref|XP_002300970.1| predicted protein [Populus trichocarpa]
gi|118487526|gb|ABK95590.1| unknown [Populus trichocarpa]
gi|222842696|gb|EEE80243.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK + SG D +
Sbjct: 2 SIFEYNGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHDKLFVGLSGLGTDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GLD++ K +
Sbjct: 62 TLYQRLVFRHKMYQLREERDMKPETFANLVSAVLYEKRFGPYFCQPVIAGLDDDDKPFIC 121
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
T D +G+ E + GS S + + K P + P E ++V
Sbjct: 122 TMDFIGAKELAKDFVVAGSASESLYGACEAFFK---PDMEP----------DELFEVVSQ 168
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++ +RD + I ++ D I + ++ R D
Sbjct: 169 ALLASVDRDCLSGWGGHIYIVTPDDIKEKILKGRMD 204
>gi|351721818|ref|NP_001237990.1| uncharacterized protein LOC100499664 [Glycine max]
gi|255625639|gb|ACU13164.1| unknown [Glycine max]
Length = 204
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK +A SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL +E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCLGAKE 130
>gi|302764110|ref|XP_002965476.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
gi|302823097|ref|XP_002993203.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300138973|gb|EFJ05723.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300166290|gb|EFJ32896.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
Length = 204
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S + NG VA+ G D A+D R+ + ++ D+ +I K+ DK + +G +DV+
Sbjct: 2 SIFTYNGSALVAMVGKDCFAIASDRRLGVNFQTIATDFQRIFKIHDKLYVGLAGLASDVQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH ++Q Q + M +S TLY KRF PY+ ++ GL + K +
Sbjct: 62 TLYQRLKYRHNLFQLQEERDMRPETFSNFVSATLYEKRFGPYFVQPLIAGLGADNKPYIC 121
Query: 129 TYDAVGSYE 137
T D++G+ E
Sbjct: 122 TMDSIGAIE 130
>gi|448107066|ref|XP_004200900.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|448110074|ref|XP_004201531.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359382322|emb|CCE81159.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359383087|emb|CCE80394.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
Length = 206
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P+ NGG+ VA+ G D A+D R+ LS ++ KI + DK + +G DV
Sbjct: 4 PFSLNGGSAVAMVGKDCVAIASDLRLGNQSLGLSNNFEKIFQFGDKTFLGLTGLATDVIT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGK-GCVY 128
L ++ +H +Y+ + + + + L+S+TLY KRF PY+ ++ GLD + +
Sbjct: 64 LSEVFRFKHNLYKLREERDIEPKTLANLVSSTLYEKRFGPYFVSPLVAGLDPKSNVPFIC 123
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+D++G + G ++ + L L PS L +D +S+
Sbjct: 124 GFDSIGCIDFAKDFIVGGTASDQLYGLCESLYEPS---LEPEDLFETISQV--------- 171
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD I R ++ R+D
Sbjct: 172 LLNAVDRDALSGWGAVVYIVTKDKIIRRVLKTRQD 206
>gi|255558626|ref|XP_002520338.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223540557|gb|EEF42124.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 204
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG +A+ G + A+D R+ ++ D+ +I K+ D+ + SG D +
Sbjct: 2 SIFEYNGSALIAMVGKNCFAIASDRRLGVQLQTIATDFQRIYKIHDRLFLGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M+ L+S LY KRF PY+ V+ GL +E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMNPETFASLVSALLYEKRFGPYFCQPVIAGLSDENKPFIC 121
Query: 129 TYDAVGSYE 137
T D++G+ E
Sbjct: 122 TMDSIGAKE 130
>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 181
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 34 RMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPA 93
R + G ++S++ +KI ++ + +A +G D+ +L ++L A +Y+ + ++MS A
Sbjct: 2 RATIGNMVMSKNVTKIFQIDEHLALAGAGNVGDILSLVRMLRAETKLYRARVGREMSVKA 61
Query: 94 MGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 153
+ L +N L ++FPY+ + ++GG D K +Y+ D G Y S GSG
Sbjct: 62 LATLTANILNGTKYFPYFGWFLIGGYDE--KPNLYSVDMAGGMTEDKYVSAGSGMEFAYA 119
Query: 154 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGI 213
L+N+ K +S E V L +A +RD++T + + +V + K+G
Sbjct: 120 VLENEYKE-------------DMSVDEGVKLAVKAINTAIKRDVFTGDGILVVKITKEG- 165
Query: 214 HREYMELRK 222
Y EL K
Sbjct: 166 ---YRELDK 171
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 2 TKQHPAWSPYDN--NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMA 59
T++ SP + G T V + ++ V A D R S GY + S+D K+ ++ +
Sbjct: 32 TERRAQASPDEEMKTGTTTVGLKTSEGVVLATDMRASMGYMVSSKDVQKVEQIHPTAALT 91
Query: 60 SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119
+G + ++L + L A +Y+ + + MS A+ LL+N L FF +LGG+
Sbjct: 92 IAGSVSAAQSLIRSLKAETSLYETRRGQDMSMQALATLLANFLRSGAFFVVQP--ILGGV 149
Query: 120 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 179
D EG VY+ DA+G Y+ GSGS + L+ + LS
Sbjct: 150 DEEGP-HVYSMDALGGMSEENYTVTGSGSQYALGVLEQHYEE-------------DLSIE 195
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDGI 213
EA + SA ERD+ + N + + V+ +G+
Sbjct: 196 EAKTVAAKAIQSAVERDLASGNGINVAVVTDEGV 229
>gi|17380183|sp|O65084.1|PSB3_PICMA RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|2982322|gb|AAC32146.1| probable proteasome subunit [Picea mariana]
gi|116784298|gb|ABK23292.1| unknown [Picea sitchensis]
Length = 204
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK + SG DV+
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDVQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + A RH +YQ + + M L+S LY KRF PY+ V+ GL + K +
Sbjct: 62 TLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFIC 121
Query: 129 TYDAVGSYE 137
T D++G+ E
Sbjct: 122 TMDSIGAKE 130
>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121727671|sp|Q9YES4.2|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 203
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + I D V AAD RMS G ILSR++ KI + D+ +A +G D+ L +++
Sbjct: 5 GATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGLVRIV 64
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+ + + K + + + LS+ LY +FFP+ ++GG+D G+ +Y D +G
Sbjct: 65 EGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYVLDPLG 124
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y + G+G+T L++ K L + AV L + A
Sbjct: 125 SIIEEDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEALRASMA------------- 171
Query: 195 RDIYTANKLEIVVLNKDG 212
RD T + ++++VL G
Sbjct: 172 RDAGTGDGIDVLVLPVSG 189
>gi|15920523|ref|NP_376192.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574822|sp|Q975U8.1|PSB1_SULTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|15621306|dbj|BAB65301.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 197
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T + I D + AA+ R+S G +LSR K+ K+ + +A +G D++ L +L+
Sbjct: 7 TALGIKLNDGIILAAERRLSYGGFVLSRSAKKVFKIG-RFGIAGAGIMGDIQTLTRLMNV 65
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
Y+ +NK +S A +LLS LY ++ P+ S + GG+D+EG ++ D +GS
Sbjct: 66 EIKYYEMYNNKPISVKAAAKLLSVILYQYKWTPFISELLFGGVDDEGP-KLFVLDPIGSL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
Y++ GSG+ + + L+++ PS ++ + ++V +A ERD
Sbjct: 125 IEDNYAAVGSGARVAIGVLESEY-DPS------------MNLDKGKEIVLKALKAAIERD 171
Query: 197 IYTANKLEIVVLNKDGIHRE 216
+ + + ++I+ + +D E
Sbjct: 172 VTSGDGIDILTIKRDNTSSE 191
>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595721|sp|A1RTI7.1|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119674013|gb|ABL88269.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum islandicum
DSM 4184]
Length = 200
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V IA + V A D R++ GY I + KI K+ D SG AD+++L L
Sbjct: 3 TTVGIAVKEGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSLLSFLTL 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R Y+ ++ + + A+ +S L+Y R + Y +++GG+D E +Y D +G+
Sbjct: 63 RAREYKIEYKRPIPIRALVNYVSLILFYSRPYIYLVHSIIGGVDREEGAVLYMVDWLGTV 122
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
R Y + GSGS P+ L+ + +D AVDL +A D
Sbjct: 123 TRERYIATGSGS----PYAKGALEVGYREDMSLED---------AVDLAIRSVKAAIRND 169
Query: 197 IYTANKLEIVVLNKDGIHREYMELRK 222
+ +++VV+ K+G R + +K
Sbjct: 170 PGSGEGIDVVVITKEGFRRVFTAQQK 195
>gi|302771876|ref|XP_002969356.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
gi|300162832|gb|EFJ29444.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
Length = 239
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + AD V AD+R +TG + +R KI KL D + SG AD + + +
Sbjct: 17 GTTIIGVEYADGVVLGADSRTTTGIYVANRASDKISKLTDNVYICRSGSAADTQVISDYV 76
Query: 75 AARHLIYQHQ--HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
R+L++QH +Q + A +L+ Y + F ++GG D KG ++
Sbjct: 77 --RYLLHQHTIVLGEQATVKAAAKLVREIAYSNKSFLEAGM-IVGGWDKHEKGSIFGVPI 133
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G+ RV ++ GSGST I FLD + P +S+ EA DLV + A
Sbjct: 134 GGTLLRVPFTIGGSGSTYIFGFLDQAWR-------PG------MSKQEAQDLVVKAVSLA 180
Query: 193 TERDIYTANKLEIVVLNKDGIHREYM 218
RD + + V ++ G+ R+Y
Sbjct: 181 MARDGGSGGVVRTVTISSAGVTRDYF 206
>gi|161528202|ref|YP_001582028.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595718|sp|A9A4A1.1|PSB1_NITMS RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|160339503|gb|ABX12590.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 198
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I V A++ R++ G ++S+ K + K +G AD++ L +
Sbjct: 7 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 66
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
AA I + + + + + +++SN +Y +R+FP + ++GG+ + K +YT D +G
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLG 124
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ + + LD Q K P+ +++ EA+DL K +A+
Sbjct: 125 SVLPDEYAAVGTGAEMALGVLDPQFK-PN------------MTKDEAIDLAKRAVRAASL 171
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELR 221
RD + + ++++V+ KDG E++
Sbjct: 172 RDSASGDGVDVLVITKDGTEEFTEEIK 198
>gi|351723417|ref|NP_001237278.1| uncharacterized protein LOC100306084 [Glycine max]
gi|255627485|gb|ACU14087.1| unknown [Glycine max]
Length = 204
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK + SG D +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL ++ K +
Sbjct: 62 TLYQRLLFRHKLYQLREERDMKPQTFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 129 TYDAVGSYE 137
T DA+G+ E
Sbjct: 122 TMDAIGAKE 130
>gi|68470996|ref|XP_720505.1| hypothetical protein CaO19.2755 [Candida albicans SC5314]
gi|68471452|ref|XP_720274.1| hypothetical protein CaO19.10269 [Candida albicans SC5314]
gi|46442133|gb|EAL01425.1| hypothetical protein CaO19.10269 [Candida albicans SC5314]
gi|46442375|gb|EAL01665.1| hypothetical protein CaO19.2755 [Candida albicans SC5314]
Length = 127
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY +NGGT + IAG D+ V A DTR GYSI SR SKI + D +M ++GF AD
Sbjct: 25 FNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILMTANGFAADG 84
Query: 68 KALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKRFFP 109
AL + Y+ +N K+++ + + + LY KRFFP
Sbjct: 85 VALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFP 127
>gi|67623727|ref|XP_668146.1| proteasome subunit beta type 1 (20S proteasome alpha subunit F)
(20S proteasome subunit beta-6) [Cryptosporidium hominis
TU502]
gi|54659317|gb|EAL37899.1| proteasome subunit beta type 1 (20S proteasome alpha subunit F)
(20S proteasome subunit beta-6) [Cryptosporidium
hominis]
Length = 107
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
++PY NNGG+CVA+AG D+ V AADTR+S Y I SR SK +L +KC++A SG AD+
Sbjct: 37 FNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLADI 96
Query: 68 KALQKLL 74
AL+K L
Sbjct: 97 NALRKTL 103
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V +A D+ V AAD + + G + ++ KI++L + + +G AD + L
Sbjct: 30 RGTTTVGMALKDFVVLAADKKATAGLYVAHKNVKKIVRLTENSAITIAGLVADAQTLADY 89
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ A Y + +N+ MS +M LL L ++FP+ +LGG D +++ D
Sbjct: 90 IRAEAYYYYYINNRPMSIRSMASLLGLILNEYKYFPFIVQLILGGYDYYEGAKLFSIDYF 149
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y++ GSGS + + +++ + +S +AV LV A+A+
Sbjct: 150 GDVTEERYTATGSGSPIAIGVIESGYRP-------------EMSIDDAVSLVVKAVATAS 196
Query: 194 ERDIYTAN-KLEIVVLNKDGIHREYM----ELRK 222
RD+++ +++VV+ KD +RE E+RK
Sbjct: 197 MRDVFSGGIGVDVVVIGKD-FYREMTFQGEEIRK 229
>gi|67606993|ref|XP_666789.1| proteasome component [Cryptosporidium hominis TU502]
gi|54657844|gb|EAL36555.1| proteasome component [Cryptosporidium hominis]
Length = 202
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRM-STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
NGG +A+ G + A D R+ S GY + D+ K+I+ + K +M SG D+ L
Sbjct: 4 NGGAILAMKGKECVAFATDMRLGSNGYRTIGTDFDKVIRPSSKTLMGFSGLATDIHTLTN 63
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
L+ + +Y + +++ A+ + ++ LY KRF PY+ ++ GLDN + YD
Sbjct: 64 LIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGYDL 123
Query: 133 VGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFA 190
+G ++ G+ DNQL + P L E +++V C
Sbjct: 124 IGCLSVCSEFAISGTA--------DNQLFG------ICESYYRPDLEPDELMEIVSQCML 169
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
S +RD ++ ++ +L + + + ++ R D
Sbjct: 170 SGIDRDAFSGWGCKVYLLTPEKLVTKTLKSRMD 202
>gi|14594927|emb|CAC43324.1| putative beta 3 proteasome subunit [Nicotiana tabacum]
Length = 178
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
S ++ NG VA+ G + A+D R+ ++ D+ +I ++ DK + SG DV
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFRIHDKVFIGLSGLGTDV 60
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL ++ K +
Sbjct: 61 LTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 128 YTYDAVGSYE 137
T D++G+ E
Sbjct: 121 CTMDSIGAKE 130
>gi|448468124|ref|ZP_21599755.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
gi|445810867|gb|EMA60881.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
Length = 243
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I AD V A D R S G + S+D K+ ++ + + +G + ++L
Sbjct: 47 KTGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQSLIS 106
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
L A +Y+ + K M+ A+ L N L F Y +LGG+D+EG +Y+ DA
Sbjct: 107 TLKAETSLYETRRGKDMTMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDA 163
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G Y+ GSGS + L+ + D VT EA ++ SA
Sbjct: 164 LGGTTEEEYTVTGSGSQYALGVLEQEY----------HDDVTV---DEATEIAAKAIQSA 210
Query: 193 TERDIYTANKLEIVVLNKDGI 213
ERD+ + N + + V+ +DG+
Sbjct: 211 VERDLASGNGINVAVVTEDGV 231
>gi|448456459|ref|ZP_21595228.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
gi|445811935|gb|EMA61932.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
Length = 243
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I AD V A D R S G + S+D K+ ++ + + +G + + L
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLIST 107
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + K MS A+ L N L F Y +LGG+D+EG +Y+ DA+
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDAL 164
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y+ GSGS + L+ + D VT EA ++ SA
Sbjct: 165 GGTTEEEYTVTGSGSQYALGVLEQEY----------HDEVTV---DEATEIAAKAIQSAV 211
Query: 194 ERDIYTANKLEIVVLNKDGI 213
ERD+ + N + + V+ DG+
Sbjct: 212 ERDLASGNGINVAVVTDDGV 231
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 19/208 (9%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D V A + R + G I SR KI ++AD+ M ++G D + L +L
Sbjct: 10 KGTTTVGLICKDGIVLATEKRATIGNYIASRRAKKIYQVADRVAMTTAGSVGDAQFLARL 69
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ + ++ + A+ +LSN L R+FPY+ ++GG+D G +++ D +
Sbjct: 70 VKVEASLYETRKEEKPTVKAIATMLSNLLNSSRYFPYFVQLLIGGVDKRGP-SMFSIDPI 128
Query: 134 -GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G+ E + GSGS L+++ ++ E V+L SA
Sbjct: 129 GGAIEETDIVATGSGSPTAYGVLEDRY-------------YPEITTQEGVELAIRAITSA 175
Query: 193 TERDIYTANKLEIVVLNKDGIHREYMEL 220
+RD + + +++V + KD EY++L
Sbjct: 176 MKRDSASGDGIDVVKITKD----EYVQL 199
>gi|18395025|ref|NP_564149.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
gi|288558823|sp|Q9XI05.2|PSB3A_ARATH RecName: Full=Proteasome subunit beta type-3-A; AltName: Full=20S
proteasome beta subunit C-1; AltName: Full=Proteasome
component T
gi|17473525|gb|AAL38246.1| proteasome subunit [Arabidopsis thaliana]
gi|21387087|gb|AAM47947.1| proteasome subunit [Arabidopsis thaliana]
gi|110740894|dbj|BAE98543.1| 20S proteasome beta subunit PBC2 like protein [Arabidopsis
thaliana]
gi|332192025|gb|AEE30146.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
Length = 204
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ D+ + SG DV+
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY V+ GL ++ K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFIC 121
Query: 129 TYDAVGSYE 137
T D++G+ E
Sbjct: 122 TMDSIGAKE 130
>gi|224084924|ref|XP_002307450.1| predicted protein [Populus trichocarpa]
gi|222856899|gb|EEE94446.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 14/216 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK + SG D +
Sbjct: 2 SIFEYNGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHDKVFVGLSGLGTDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL ++ K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
T D +G+ E + GS S + + K P + P E ++V
Sbjct: 122 TMDFIGAKELAKDFVVAGSASESLYGACEALFK---PDMEP----------EELFEVVSQ 168
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++ +RD + I ++ D I + ++ R D
Sbjct: 169 ALLASVDRDCLSGWGGHIYIVTPDEIREKILKGRMD 204
>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
Length = 208
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A +TR + G + + KI K+ D +G +D ++L K +
Sbjct: 9 GTTTVGLTCKDGVVFATETRATMGNLVAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKYI 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +++ ++ K+++ A L SN L+ R +P+Y +LGG+D++G +Y+ D G
Sbjct: 69 RAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGVDDKGP-ALYSLDPTG 127
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
+ S GSGS + L+++ +QD L E +D+ SA E
Sbjct: 128 GVIKDLVISTGSGSPVAYGVLEDRY---------SQD----LYVEEGIDVAIRAIKSAME 174
Query: 195 RDIYTANKLEIVVLNKDGIHR 215
RD Y+ N + + + ++G R
Sbjct: 175 RDTYSGNSILVATITEEGFKR 195
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T + I V A + R + G I SRD KI ++ D M +G D + L ++
Sbjct: 8 KGTTTIGIICDQGVVLATERRATMGNFIASRDAQKIYRITDNAAMTIAGSVGDGQRLARI 67
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L +++ + + MS A+ LLSN L R+ PYY ++GGLD G +Y+ D +
Sbjct: 68 LQVEAKLFELRRHGSMSINALSMLLSNILAEMRYAPYYVQVLIGGLDKAGP-KIYSLDPL 126
Query: 134 GS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G E + S GSGS + L+++ K P +S E V+L SA
Sbjct: 127 GGRIEEEKFVSTGSGSPIAYGVLEDRYK-------PG------MSVEEGVELAARALESA 173
Query: 193 TERDIYTANKLEIVVLNKD 211
+RD + N ++ V+ +
Sbjct: 174 MKRDSASGNGMQFCVITAE 192
>gi|225459609|ref|XP_002285871.1| PREDICTED: proteasome subunit beta type-3-A isoform 1 [Vitis
vinifera]
gi|302141789|emb|CBI18992.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG +A+ G + A+D R ++ D+ KI ++ D+ + SG D +
Sbjct: 2 SIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL +E K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFIC 121
Query: 129 TYDAVGSYE 137
T D++G+ E
Sbjct: 122 TMDSIGAKE 130
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + + A + R + G I S+ K+ ++AD+ M ++G D + L + +
Sbjct: 14 GTTTVGLVFDGGVILATERRATMGNMIASKKAKKVYQIADRIGMTTAGGVGDAQQLARWV 73
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+Y + ++MS A LLSN L R PYY ++GG+D+ G +Y+ DA+G
Sbjct: 74 QVECSLYNIRRGREMSVGASASLLSNILNNNRMMPYYVQLLVGGVDSGGP-SIYSVDALG 132
Query: 135 SYE-RVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
+ GSGS L+++ + P E + VDL SA
Sbjct: 133 GASPEDDIVATGSGSPFAYGVLEDRFEKGMP-------------EKDCVDLAIRALRSAM 179
Query: 194 ERDIYTANKLEIVVLNKDGIHREYME 219
RD + + +VV+ KD + E+ME
Sbjct: 180 RRDSASGEDISVVVITKDK-YEEFME 204
>gi|168036644|ref|XP_001770816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677875|gb|EDQ64340.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NG +A+ G + A+D R+ + ++ D+ +I K+ DK + SG DV+ + +
Sbjct: 7 NGSALIAMVGKNCFAIASDRRLGVNFQTIACDFQRIFKIHDKLYIGLSGLATDVQTMHQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L RH +YQ + + M L+S LY KRF PY+ ++ GL+++G + T D +
Sbjct: 67 LQFRHKLYQLREERNMRPETFASLVSAILYEKRFGPYFCEPIIAGLNDDGTPFICTTDLI 126
Query: 134 GSYE 137
G+ +
Sbjct: 127 GAKQ 130
>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485300|dbj|BAJ50954.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 25 DYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ 84
D V A DTR+++G+ + R K++ LA + +G AD + L L+ A YQ
Sbjct: 23 DAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQIM 82
Query: 85 HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQ 144
+ MS PA+ +L S+ ++ R+FP+Y+ +L G+DNEG +Y D GS +
Sbjct: 83 RGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIAT 141
Query: 145 GSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLE 204
GSGS + L+ + +D + AV+L ++A RD + + ++
Sbjct: 142 GSGSPVAYGVLEPNYR---------ED----MDFNSAVELAFQAVSAAIRRDAGSGDSVD 188
Query: 205 IVVLNKDGIHREYMELRKD 223
+ + KD + Y EL D
Sbjct: 189 VAYVLKD---KGYGELSLD 204
>gi|307109788|gb|EFN58025.1| hypothetical protein CHLNCDRAFT_48590 [Chlorella variabilis]
Length = 204
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+AG + +D R L+ DY K+ K+ D+ + +G D +
Sbjct: 2 SIFEYNGSAIVAMAGKECVAIGSDLRFGVQLQTLATDYKKVYKIHDQLFIGLAGLGTDAE 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + A +H +Y+ + + + A GQL+S TLY +RF PY+ V+ GL+ +G +
Sbjct: 62 TLSQRFAFKHNLYKLREERDIKPSAFGQLVSATLYERRFGPYFCQPVIAGLEPDGSPYLC 121
Query: 129 TYDAVGSYE 137
D++G+ E
Sbjct: 122 GMDSIGAQE 130
>gi|384248553|gb|EIE22037.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 205
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+AG + +D R + L+ DY K+ K+ DK + +G D +
Sbjct: 2 SIFEYNGAAIVAMAGKECVAIGSDLRFGVQFQTLATDYKKVYKIHDKLFIGLAGLGTDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL-DNEGKGCV 127
+ + L RH +Y+ + + + G+L+S+ LY KRF PY+ V+ GL D +
Sbjct: 62 TMHQKLKFRHNLYKLREERNIKPSTFGELVSSMLYEKRFGPYFVSPVIAGLEDKTNVPYI 121
Query: 128 YTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV-DLV 185
D +G+ E + G+ +P L + P E E + + V
Sbjct: 122 CGMDTIGAIETANDFMVAGT--------------APDSLYGMCESMFRPDMEPEELFETV 167
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
C S +RD + + V+ KD + ++ R D
Sbjct: 168 TQCLMSGADRDALSGWGAIVYVITKDAVVARTLKGRMD 205
>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
A3]
gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
voltae A3]
Length = 215
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V IA AD V A D R + G I ++ K+ + + M +G D ++L +++
Sbjct: 10 GTTTVGIACADGVVLATDKRATMGNLIADKEAKKLYPIDEYIAMTIAGSVGDAQSLVRII 69
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD--NEGKGCVYTYDA 132
+A IY+ + MS A L+SN L+ R FP + ++GG D N+ + +Y+ DA
Sbjct: 70 SAETKIYKMRTGNNMSPLACTTLMSNVLHGNRHFPLMNQLIVGGYDVCND-EPQLYSLDA 128
Query: 133 VGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
VG E ++S GSG SP+ + + V L + A+ L +S
Sbjct: 129 VGGINEETTFTSTGSG-------------SPTAYGVLEAEYVNKLKTSAALKLAVKAISS 175
Query: 192 ATERDIYTANKLEIVVLNKDGI 213
A +RD Y+ N + + ++K+G+
Sbjct: 176 AMKRDAYSGNGISLAKIDKNGV 197
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V D V A +TR + G + +++ K+ ++ DK +G + ++L +L
Sbjct: 9 GTTTVGFVCTDGVVLATETRATMGSLVANKNADKLFQIDDKIGATIAGTVSHAQSLMDIL 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ ++ K MS A+ L SN L + PYY +L G+D +G +YT D G
Sbjct: 69 KAEISLYKLRNEKDMSIDALAVLTSNILKSR---PYYVQTILAGVDKDG-AKLYTLDPSG 124
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
SY ++S GSGS L+++ ++ E + SA E
Sbjct: 125 SYIPDTFTSTGSGSPYAFGVLEDRYNED-------------ITTEEGKKIAIKAITSAME 171
Query: 195 RDIYTANKLEIVVLNKDGIH 214
RD+Y+ N + V+ KDG+
Sbjct: 172 RDVYSGNNYRLGVITKDGMK 191
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D + A D R S G + ++ K+ K+ D M +G D +A+ +L
Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRL 64
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + + + A LLSN L+ R FP+ + ++GG D +++ D +
Sbjct: 65 LIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPL 124
Query: 134 GSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G E +++ GSGS + L+ +S E + L SA
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEAGYDR-------------DMSVEEGIKLALNALKSA 171
Query: 193 TERDIYTANKLEIVVLNKDGIH 214
ERD ++ N + + V+ KDG+
Sbjct: 172 MERDTFSGNGISLAVITKDGVK 193
>gi|326472712|gb|EGD96721.1| proteasome subunit beta type-3 [Trichophyton tonsurans CBS 112818]
gi|326482041|gb|EGE06051.1| proteasome component PUP3 [Trichophyton equinum CBS 127.97]
Length = 206
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+D NGG CVA+ G D A D R+ +S ++ KI A + +G DV
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVN 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
+ +LL + +Y+ + + +S + L+S++LY KRF P++ VL G+++ GK +
Sbjct: 63 TVSQLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + ++ L P L +D +S+A
Sbjct: 123 CGFDSIGCIDFAKNFIVSGTASDQLYGTCES-LWEPD---LEPEDLFETISQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 --LLNAVDRDALSGWGAYVYIIEKDKVTKRKLKGRQD 206
>gi|327304369|ref|XP_003236876.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459874|gb|EGD85327.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 214
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+D NGG CVA+ G D A D R+ +S ++ KI A + +G DV
Sbjct: 11 SPFDINGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVN 70
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
+ +LL + +Y+ + + +S + L+S++LY KRF P++ VL G+++ GK +
Sbjct: 71 TVSQLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFI 130
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + ++ L P L +D +S+A
Sbjct: 131 CGFDSIGCIDFAKNFIVSGTASDQLYGTCES-LWEPD---LEPEDLFETISQA------- 179
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 180 --LLNAVDRDALSGWGAYVYIIEKDKVTKRKLKGRQD 214
>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 223
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 25 DYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ 84
D V A DTR+++G+ + R K++ LA + +G AD + L L+ A YQ
Sbjct: 26 DAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQIM 85
Query: 85 HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQ 144
+ MS PA+ +L S+ ++ R+FP+Y+ +L G+DNEG +Y D GS +
Sbjct: 86 RGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIAT 144
Query: 145 GSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLE 204
GSGS + L+ + +D + AV+L ++A RD + + ++
Sbjct: 145 GSGSPVAYGVLEPNYR---------ED----MDFNSAVELAFQAVSAAIRRDAGSGDSVD 191
Query: 205 IVVLNKDGIHREYMELRKD 223
+ + KD + Y EL D
Sbjct: 192 VAYVLKD---KGYGELSLD 207
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D V A + R + G I SR KI K+ D+ M ++G D + L +L
Sbjct: 8 KGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFLARL 67
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y + ++ + A+ L+SN L R+FPY ++GG+D G +Y+ D +
Sbjct: 68 IKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGVDKTG-AKIYSIDPI 126
Query: 134 -GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G+ E + + GSGS + L++ + ++ EAV+L SA
Sbjct: 127 GGAIEEIDIVATGSGSPMAYGVLEDNYRK-------------DINVDEAVELAIRAIYSA 173
Query: 193 TERDIYTANKLEIVVLNKDGIHREYMEL 220
+RD + + +++V + +EY+EL
Sbjct: 174 MKRDSASGDGIDVVKIT----EKEYVEL 197
>gi|425781832|gb|EKV19776.1| hypothetical protein PDIG_01170 [Penicillium digitatum PHI26]
gi|425782962|gb|EKV20840.1| hypothetical protein PDIP_12490 [Penicillium digitatum Pd1]
Length = 206
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
+P+D NGG CVA+ G D A D R+ +S ++ KI A + +G DV
Sbjct: 3 NPFDINGGACVAMVGKDCVAIACDLRLGMQALTISNNFPKIFNYAPSTYLGLTGLATDVN 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ + L+S++LY KRF PY+ VL G++ GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVLAGINPTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + + P L P +D +S+A
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWE---PDLAP-EDLFETISQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA +RD + ++ ++ KD + + ++ R+D
Sbjct: 172 --LLSAVDRDALSGWGAQVYIIEKDKVTQRLLKGRQD 206
>gi|297845150|ref|XP_002890456.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|5263324|gb|AAD41426.1|AC007727_15 Identical to gb|Y13173 Arabidopsis thaliana mRNA for proteasome
subunit. EST gb|T76747 comes from this gene [Arabidopsis
thaliana]
gi|12744997|gb|AAK06878.1|AF344327_1 putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|297336298|gb|EFH66715.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
++ NG VA+ G + A+D R+ ++ D+ +I K+ D+ + SG DV+ L
Sbjct: 4 FEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQTL 63
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
+ L RH +YQ + + M L+S LY KRF PY V+ GL ++ K + T
Sbjct: 64 YQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFICTM 123
Query: 131 DAVGSYE 137
D++G+ E
Sbjct: 124 DSIGAKE 130
>gi|323448836|gb|EGB04730.1| hypothetical protein AURANDRAFT_32152 [Aureococcus anophagefferens]
Length = 219
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+ PY NNGG+ A +G D+ + AAD+++ G +I S + + L + + +SG AD
Sbjct: 12 FRPYTNNGGSLAAASGHDFTLLAADSQLVHGMTIASTVFERTSALGNLAALGTSGCVADC 71
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 127
+L L Y M Q+ S +Y +R FPYY+ +L GLD G G V
Sbjct: 72 DSLSHDLRMEAERYFWGAEMSMEASVAAQVCSQMMYARRAFPYYASLLLCGLDRFGTGRV 131
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D+ GS + GS ++ LD +P P + +A +++ +
Sbjct: 132 CVFDSFGSITEGQMVAVGSAQGVLQAVLDR----FAPRYFPRFRCID-----DAKEVLLS 182
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELR 221
F A RD+ + +++ ++++ I + + +R
Sbjct: 183 AFKVAARRDVSVGHFVDLTLVSRTEILCDTVLIR 216
>gi|374327726|ref|YP_005085926.1| proteasome beta subunit [Pyrobaculum sp. 1860]
gi|356642995|gb|AET33674.1| proteasome beta subunit [Pyrobaculum sp. 1860]
Length = 201
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V I D + A D R++ GY I + KI K+ D SG AD++++ L
Sbjct: 3 TTVGIVVRDGVILATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLTL 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R Y+ +H K + A+ +S L+Y R + Y +++GG+D EG +Y D +G+
Sbjct: 63 RAREYRMEHKKPIPISALVNYMSLILFYSRPYVYIVHSIIGGVD-EGGAALYMIDWLGTV 121
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
R Y + GSGS P+ L+ +D +S EA+DL +A D
Sbjct: 122 TRERYIATGSGS----PYAKGALEVGY-----RED----MSLEEAIDLAIKSVKAAIRND 168
Query: 197 IYTANKLEIVVLN-KDGIHREYMELRK 222
+ +++VV+ K+G R + +K
Sbjct: 169 PGSGEGIDVVVITKKEGFRRVFTTQQK 195
>gi|168037918|ref|XP_001771449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677176|gb|EDQ63649.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NG +A+ G D A+D R+ + ++ D+ +I K+ D + SG DV+ + +
Sbjct: 7 NGSALIAMVGKDCFAIASDRRLGVNFQTIACDFQRIFKIHDHLYIGLSGLATDVQTMHQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L RH +YQ + + M L+S LY KRF PY+ ++ GL+++G + T D +
Sbjct: 67 LNFRHKLYQLREERNMRPETFASLVSAMLYEKRFGPYFCEPIIAGLNDDGTPFICTTDLI 126
Query: 134 GS 135
G+
Sbjct: 127 GA 128
>gi|323448817|gb|EGB04711.1| hypothetical protein AURANDRAFT_55099 [Aureococcus anophagefferens]
Length = 274
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%)
Query: 5 HPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQ 64
H + PY NNGG+ A G + + AAD++ G I S + +++ L+D +M +SG
Sbjct: 48 HGKFRPYANNGGSLAAACGHGFALIAADSQFLHGMMITSSVFDRVVPLSDVVLMGTSGCA 107
Query: 65 ADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 124
AD +++ + Y M QL S +Y +R FP++ V+ GLD+ G
Sbjct: 108 ADCESMTHDVRTEAERYIVGAKLSMDASVAAQLCSGAMYARRGFPHHMSLVVCGLDSVGF 167
Query: 125 GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 157
G V+ +D++GS + GS ++ LD
Sbjct: 168 GRVFVFDSIGSLMEGPTVTAGSAREVLQSVLDG 200
>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 25 DYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ 84
D V A DTR+++G+ + R K+ LA + +G AD + L L+ A YQ
Sbjct: 23 DAVVVATDTRVTSGFFVAHRRGKKVFPLAPHVAITIAGRVADAQTLIDLIKANINYYQIM 82
Query: 85 HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQ 144
+ MS PA+ +L S+ ++ R+FP+Y+ +L G+DNEG +Y D GS +
Sbjct: 83 RGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIAT 141
Query: 145 GSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLE 204
GSGS + L+ + +D + AV+L ++A RD + + ++
Sbjct: 142 GSGSPVAYGVLEPNYR---------ED----MDFNSAVELAFQAVSAAIRRDAGSGDSVD 188
Query: 205 IVVLNKDGIHREYMELRKD 223
+ + KD + Y EL D
Sbjct: 189 VAYVLKD---KGYGELSLD 204
>gi|357509159|ref|XP_003624868.1| Proteasome subunit beta type [Medicago truncatula]
gi|355499883|gb|AES81086.1| Proteasome subunit beta type [Medicago truncatula]
Length = 204
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK + SG D +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDSQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S+ Y KRF PY+ V+ GL ++ K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 129 TYDAVGSYE 137
T DA+G+ E
Sbjct: 122 TMDAIGAKE 130
>gi|388491594|gb|AFK33863.1| unknown [Medicago truncatula]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK + SG D +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDSQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S+ Y KRF PY+ V+ GL ++ K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 129 TYDAVGSYE 137
T DA+G+ E
Sbjct: 122 TMDAIGAKE 130
>gi|347826593|emb|CCD42290.1| similar to proteasome subunit beta type-3 [Botryotinia fuckeliana]
Length = 212
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVS 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCV 127
+ L + +Y+ + + +S M L+S++LY +RF P++ V+ GLD + GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFI 122
Query: 128 YTYDAVGSYERV------GYSSQ---GSGSTLIMP-FLDNQLKSPSPLLLPAQDAVTPLS 177
+D++G + G +S G+ L P L++Q++ P +D +S
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLLNSQIQGP-------EDLFETIS 175
Query: 178 EAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +A +RD + + ++ KD + + ++ R+D
Sbjct: 176 QA---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 212
>gi|388513745|gb|AFK44934.1| unknown [Medicago truncatula]
Length = 204
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK + SG D +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDSQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S+ Y KRF PY+ V+ GL ++ K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMRPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 129 TYDAVGSYE 137
T DA+G+ E
Sbjct: 122 TMDAIGAKE 130
>gi|408404298|ref|YP_006862281.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364894|gb|AFU58624.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 201
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 108/202 (53%), Gaps = 16/202 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I+ + + AA+ R+S G +++++ K + D A +G AD++ L + +
Sbjct: 8 GATVVGISYNNGVILAAEKRVSFGNFVVNKNIKKTFSVTDHVGAACAGMVADMQVLVRQV 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A I + + + ++ ++ +L+S ++ +R+FP + ++GG++ K +YT D +G
Sbjct: 68 EALAKIRKLETRRDVAPNSIAKLMSVIMFERRYFPLLTQVIVGGINT--KPEIYTLDPLG 125
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y++ G+G+ + + +D + K P+ ++E +A +L SA +
Sbjct: 126 SVLPDDYAAVGTGAEMALGIMDAEFK-PN------------MTEEKAKELAVRAIRSAIQ 172
Query: 195 RDIYTANKLEIVVLNKDGIHRE 216
RD + + ++++V+++ G HRE
Sbjct: 173 RDAASGDGIDVLVVSRTG-HRE 193
>gi|330801313|ref|XP_003288673.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
gi|325081295|gb|EGC34816.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
Length = 205
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG C+ + G + A+D R +S DY K+ ++ DKC + SG D + L +
Sbjct: 7 NGGACIVMTGKNCVAIASDLRFGIQQQTISNDYPKVYRVNDKCFIGISGLVTDAQTLHQK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
+ RH +Y+ + + MS + L++N LY KRF PY++ ++ GL+
Sbjct: 67 IVFRHNLYKLREERDMSPKVVTNLIANMLYEKRFGPYFTEPLICGLE 113
>gi|66825821|ref|XP_646265.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
gi|74858609|sp|Q55D66.1|PSB3_DICDI RecName: Full=Proteasome subunit beta type-3
gi|60474299|gb|EAL72236.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
Length = 205
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG C+ + G + A+D R +S D+ K+ ++ DKC + SG D + L +
Sbjct: 7 NGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRINDKCFVGISGLVTDAQTLYQK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L RH +Y+ + + MS + LL+N LY KRF PY++ ++ GL+
Sbjct: 67 LVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTEPLICGLE 113
>gi|255950036|ref|XP_002565785.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592802|emb|CAP99170.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 206
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
+P+D NGG CVA+ G D A D R+ +S ++ KI A + +G DV
Sbjct: 3 NPFDINGGACVAMVGKDCVAIACDLRLGMQSLTISNNFPKIFNYAPSTYLGLTGLATDVN 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ + L+S++LY KRF PY+ V+ G++ GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVIAGINPTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + + P L P +D +S+A
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWE---PDLAP-EDLFETISQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA +RD + ++ ++ KD + + ++ R+D
Sbjct: 172 --LLSAVDRDALSGWGAQVYIIEKDKVTQRLLKGRQD 206
>gi|145341760|ref|XP_001415971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576194|gb|ABO94263.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYS-ILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
NG +A+ G D A+D R+ + + DYSK+ K+ D+ + +G AD L +
Sbjct: 7 NGAAVIAMTGKDCVAIASDLRLGINQNQTAAVDYSKLHKIHDRLYLGLTGLIADQLTLAQ 66
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
L +H +Y+ + N+ MS G ++S TLY KRF PYY+ V+ GLD +GK + + D
Sbjct: 67 KLKFKHDMYELRENRVMSPKVFGAVVSATLYEKRFSPYYTEPVVAGLDADGKPYITSMDL 126
Query: 133 VGS 135
+G+
Sbjct: 127 IGA 129
>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D V A + R + G I S+ KI ++AD+ M ++G D + L ++
Sbjct: 10 KGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARI 69
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ + ++ + A+ L SN L R+FPY ++GG+D+EGK +Y+ D +
Sbjct: 70 IKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGK-SIYSIDPI 128
Query: 134 -GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFAS 191
G+ E + GSGS L +D TP + EAV+L S
Sbjct: 129 GGAIEEKDIVATGSGSLTAYGVL--------------EDRFTPEIGVDEAVELAVRAIYS 174
Query: 192 ATERDIYTANKLEIVVLNKDGIHR 215
A +RD + + +++V + +D ++
Sbjct: 175 AMKRDSASGDGIDVVKITEDEFYQ 198
>gi|374628281|ref|ZP_09700666.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906394|gb|EHQ34498.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + V A + R + G I S+ K+ ++AD+ M +G D + L +L
Sbjct: 10 KGTTTVGLLFDGGVVLATERRATMGNMIASKKAKKVYQIADRIGMTIAGGVGDAQQLARL 69
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ ++ + + ++ A LLSN L R FPYY ++GG+D G +Y+ DA+
Sbjct: 70 MQVECSLFNIRRGRPIAVGAAATLLSNVLNQNRMFPYYVQLLVGGIDRYGP-SIYSVDAL 128
Query: 134 GS---YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
G +R+ + GSGS L+++ + +SE E +DL
Sbjct: 129 GGASPEDRI--VATGSGSPFAYGVLEDRFEE-------------GMSEKECLDLAIRALR 173
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYME 219
SA +RD + + IVV+ KD + E ME
Sbjct: 174 SAMKRDSASGEDISIVVITKDK-YEELME 201
>gi|118376326|ref|XP_001021345.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89303112|gb|EAS01100.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 209
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 18/218 (8%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P+ NGG+ +A+ G AD R+ + ++ ++ K+ ++ D ++ +G DV+
Sbjct: 4 PFSYNGGSMLAMKGEQCVAIGADRRLGAQFQTVATNFQKVFRIQDNILLGLTGLATDVQT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV- 127
+L+ + +Y+ + NK M L+S TLY KR+ PY+ ++ GL+ +E KG +
Sbjct: 64 FHRLIQYKVNLYRLRENKDMKVNTFVNLISATLYEKRWGPYFVSPIVAGLEYDEVKGVIP 123
Query: 128 --YTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDL 184
TYD++G G + G+G+ D + S L E D+
Sbjct: 124 ITATYDSIGCTSIEGEFQVGGTGA-------DGLIGSCESFWRKG------LKPDELEDI 170
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRK 222
V ++ +RDI + + L KD + + ++ ++
Sbjct: 171 VAQSLSAGCDRDILSGWGGVVYTLTKDNLSVKVLKTKQ 208
>gi|327311458|ref|YP_004338355.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326947937|gb|AEA13043.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 199
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V I D V A D R++ GY I + KI K+ + SG AD++ L L
Sbjct: 3 TTVGIKARDGVVLATDKRVTAGYYIAHKRGEKIWKIDEHVAATMSGGVADLQGLLSTLTI 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
Y+ +H + + + S L+Y R Y ++ GG D+EG +Y D +GSY
Sbjct: 63 LARDYKTEHRRPIPVKTLVNYASLLLFYSRPVIYIVHSIFGGFDDEGP-QLYMLDWLGSY 121
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
Y S GSGS M L+ + ++ EAV L + +A D
Sbjct: 122 SEERYISTGSGSPYAMGVLEVGYRE-------------DMTVDEAVKLAENAVKAAMRND 168
Query: 197 IYTANKLEIVVLNKDGIHREY 217
+ ++IV + KDG R +
Sbjct: 169 PGSGEGIDIVTITKDGFRRVF 189
>gi|121706806|ref|XP_001271634.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
gi|119399782|gb|EAW10208.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+D NGG CVA+ G D A D R+ +S ++ KI + +G DV
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVN 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
+ L + +Y+ + + ++ + L+S++LY +RF P++ V+ G+++ GK +
Sbjct: 63 TVSDLFRFKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S D + L P LS + + +
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTAS-------DQLFGTCEGLWEP------DLSPEDLFETIS 169
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA +RD + ++ ++ KD + + ++ R+D
Sbjct: 170 QALLSAVDRDALSGWGAQVYIIEKDKVTKRLLKGRQD 206
>gi|295672716|ref|XP_002796904.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282276|gb|EEH37842.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S +D NGG CVA+ G D A D R+ +S ++ KI A + +G DV
Sbjct: 3 SVFDINGGACVAMIGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVS 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
+ +L + +Y+ + +Q+S + L+S++LY KRF PY+ VL G++N G+ +
Sbjct: 63 TVSDVLRFKVNMYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + L P L +D +S+A
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASEQLFGTCEG-LWEPD---LGPEDLFETISQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 --LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D + A D R S G + ++ K+ K+ D M +G D +A+ +L
Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRL 64
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + + + A LLSN L+ R FP+ + ++GG D +++ D +
Sbjct: 65 LTAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQIIIGGYDLLEGAKLFSLDPL 124
Query: 134 GSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G E +++ GSGS + L+ +S E + L SA
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEAGYDR-------------EMSVEEGIKLAINALKSA 171
Query: 193 TERDIYTANKLEIVVLNKDGIH 214
ERD ++ N + + V+ K+G+
Sbjct: 172 MERDTFSGNGISLAVITKEGVK 193
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V + D + A D R S G + ++ K+ K+ D M +G D +A+ +LL A
Sbjct: 3 TTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIA 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
+Y+ + + + A LLSN L+ R FP+ + ++GG D +++ D +G
Sbjct: 63 EAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGM 122
Query: 137 -ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
E +++ GSGS + L+ +S E + L SA ER
Sbjct: 123 NEEKTFTATGSGSPIAYGVLEAGYDR-------------DMSVEEGIKLALNALKSAMER 169
Query: 196 DIYTANKLEIVVLNKDGIH 214
D ++ N + + V+ KDG+
Sbjct: 170 DTFSGNGISLAVITKDGVK 188
>gi|49388033|dbj|BAD25149.1| Proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|215768995|dbj|BAH01224.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M A L+S LY KRF PY+ V+ GL + + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|145256886|ref|XP_001401548.1| proteasome component PUP3 [Aspergillus niger CBS 513.88]
gi|134058458|emb|CAL00667.1| unnamed protein product [Aspergillus niger]
gi|358366039|dbj|GAA82660.1| proteasome component Pup3 [Aspergillus kawachii IFO 4308]
Length = 206
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+D NGG CVA+ G D A D R+ +S ++ KI + +G DV
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVS 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
+ L + +Y+ + + ++ + L+S++LY KRF P++ V+ G+++ GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERNIAPQTLANLVSSSLYEKRFGPFFVSPVIAGINSTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + L P LS + + +
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASEQLFGTCEG-LWEPD------------LSPEDLFETIS 169
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA +RD + ++ ++ KD + + ++ R+D
Sbjct: 170 QALLSAVDRDALSGWGAQVYIIEKDKVTKRLLKGRQD 206
>gi|448445494|ref|ZP_21590392.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
gi|445685018|gb|ELZ37380.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
Length = 243
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I AD V A D R S G + S+D K+ ++ + + +G + + L
Sbjct: 47 KTGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQHLIS 106
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
L A +Y+ + K MS A+ L N L F Y +LGG+D+EG +Y+ DA
Sbjct: 107 TLKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDA 163
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G Y+ GSGS + L+ + D VT EA ++ SA
Sbjct: 164 LGGTTEEEYTVTGSGSQYALGVLEQEY----------HDDVTV---DEATEIAAKAIQSA 210
Query: 193 TERDIYTANKLEIVVLNKDGI 213
ERD+ + N + + V+ +G+
Sbjct: 211 VERDLASGNGINVAVVTDEGV 231
>gi|18411547|ref|NP_565156.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|79321410|ref|NP_001031294.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|17380184|sp|O81153.1|PSB3B_ARATH RecName: Full=Proteasome subunit beta type-3-B; AltName: Full=20S
proteasome beta subunit C-2
gi|14326552|gb|AAK60320.1|AF385730_1 At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|3421109|gb|AAC32069.1| 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|19548049|gb|AAL87388.1| At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|332197856|gb|AEE35977.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|332197857|gb|AEE35978.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
Length = 204
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ D + SG DV+
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF P+ V+ GL ++ K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFIC 121
Query: 129 TYDAVGSYE 137
T D++G+ E
Sbjct: 122 TMDSIGAKE 130
>gi|453082236|gb|EMF10284.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 206
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFPFGSSTYLGLTGLATDVS 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCV 127
+ +L + +Y+ + + +S L+S++LY KRF P++ V+ GLD++ GK +
Sbjct: 63 TVSELFRYKVNMYRLREERDISPRTFANLVSSSLYEKRFGPWFISPVVAGLDSKTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + + P L P +D +S+A
Sbjct: 123 CGFDSIGCIDFAKDFIVAGTASDQLFGTCEGLWE---PDLGP-EDLFETMSQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA +RD + + ++ KD + + ++ R+D
Sbjct: 172 --LLSAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V IA +D V A + R + G I S+ KI ++ D+ M ++G D + + +++
Sbjct: 10 GTTTVGIACSDAVVLATERRATMGNFIASKTAKKIYQIDDRIGMTTAGSVGDAQQIVRII 69
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+ +++ + N+ ++ + LLSN L +R+FP ++GG+D G +Y+ D +G
Sbjct: 70 SVESKLFKMRRNEPITIKGITTLLSNLLSGQRYFPLMVQLIVGGVDKTGPN-MYSLDPLG 128
Query: 135 S-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E + GSGS + L+++ ++ E +L +A
Sbjct: 129 GRIEETNIVATGSGSPITYGLLEDRYHK-------------DMTSDEGAELAIRALHNAM 175
Query: 194 ERDIYTANKLEIVVLNKDG 212
+RD + + +++VV+ KDG
Sbjct: 176 KRDSASGDGIDVVVITKDG 194
>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
Length = 243
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A D R S GY + S+D K+ ++ + +G + ++L + +
Sbjct: 49 GTTTVGLKTEDGVVLATDMRASLGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLIRSI 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ LL N L F Y +LGG+D +G +Y+ D G
Sbjct: 109 RAEVRLYESRRGENMSMTALSTLLGNFLRSGAF--YVVQPILGGVDEDGP-HIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ + DA LS EA + SA E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLEQEYN----------DA---LSIDEAKTVAARAVKSAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI----HREYMEL 220
RD+ + N + I V+ +DG+ H+++ E+
Sbjct: 213 RDLASGNGINICVVTEDGVEITQHKDFEEV 242
>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
gi|302595840|sp|A3CUS9.1|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanoculleus marisnigri
JR1]
Length = 214
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + V A + R + G I S+ KI ++ + + ++G D + L ++
Sbjct: 10 KGTTTVGLIFDGGVVLATEMRATMGNMIASKRAKKIYQITPRIGLTTAGGVGDAQQLVRI 69
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L +++ + K MS A LLSN L R++PYY ++GG D+EG VY+ DA+
Sbjct: 70 LQVECNLFEMRRGKTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFDDEGP-SVYSVDAM 128
Query: 134 -GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G+ + + GSGS L++Q ++ + E +A DL SA
Sbjct: 129 GGATKEEDIVATGSGSPFAYGVLEDQYRA-------------GMKEDDAKDLAVRAVRSA 175
Query: 193 TERDIYTANKLEIVVLNKDGIHREYME 219
RD + + +VV+ KD + E++E
Sbjct: 176 MRRDSASGEDIMVVVITKDK-YEEHIE 201
>gi|242808757|ref|XP_002485230.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
gi|218715855|gb|EED15277.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+D NGG CVA+ G D A D R+ +S ++ KI A + +G DV
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVT 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
+ L + +Y+ + + +S + L+S++LY +RF PY+ V+ G+++ GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S D + L P L + + +
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTAS-------DQLFGTCEGLWEP------DLGPEDLFETIS 169
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 170 QALLNAVDRDALSGWGANVYIIEKDKVTKRLLKGRQD 206
>gi|238491746|ref|XP_002377110.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|317146166|ref|XP_001821334.2| proteasome component PUP3 [Aspergillus oryzae RIB40]
gi|220697523|gb|EED53864.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|391869220|gb|EIT78422.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Aspergillus oryzae 3.042]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 104/217 (47%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+D NGG CVA+ G D A D R+ +S ++ KI + + +G DV
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFLGLTGLATDVS 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
+ L + +Y+ + + ++ + L+S++LY +RF P++ V+ G+++ GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + ++ + P L P +D +S+A
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGTCESLWE---PDLAP-EDLFETISQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA +RD + ++ ++ KD + + ++ R+D
Sbjct: 172 --LLSAVDRDALSGWGAQVYIIEKDKVTKRLLKGRQD 206
>gi|448503545|ref|ZP_21613174.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
gi|445691746|gb|ELZ43929.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
Length = 243
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V A D R S G + S+D K+ ++ + + +G + + L
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + +K MS A+ L N L FF +LGG+D+EG +Y+ DA+
Sbjct: 108 LRAETSLYEARRSKDMSMEALSTLTGNLLRSGAFFVVQP--ILGGVDDEGA-HIYSIDAL 164
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y+ GSGS + L+ + +S EA + SA
Sbjct: 165 GGTTEEEYTVTGSGSQYALGVLEQEYDD-------------EVSIDEAKTIAAKAIQSAV 211
Query: 194 ERDIYTANKLEIVVLNKDGI 213
ERD+ + N + + V+ DG+
Sbjct: 212 ERDLASGNGINVAVVTDDGV 231
>gi|297839603|ref|XP_002887683.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
gi|297333524|gb|EFH63942.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ D + SG DV+
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF P+ V+ GL ++ K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFIC 121
Query: 129 TYDAVGSYE 137
T D++G+ E
Sbjct: 122 TMDSIGAKE 130
>gi|448472548|ref|ZP_21601172.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
gi|445819852|gb|EMA69686.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
Length = 243
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V A D R S G + S+D K+ ++ + + +G + + L
Sbjct: 48 TGTTTVGIRTEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + K MS A+ L N L FF +LGG+D++G +Y+ DA+
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRTGAFFIVQP--ILGGVDDDGA-HIYSIDAL 164
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y+ GSGS + L+ + D VT + EAE + SA
Sbjct: 165 GGTTEEEYTVTGSGSQYALGVLEQEY----------HDDVT-IEEAETI--AAKAIQSAV 211
Query: 194 ERDIYTANKLEIVVLNKDGI 213
ERD+ + N + + V+ DG+
Sbjct: 212 ERDLASGNGINVAVVTDDGV 231
>gi|448428541|ref|ZP_21584273.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|448450269|ref|ZP_21592168.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|448481610|ref|ZP_21604961.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
gi|448507503|ref|ZP_21615014.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|448523281|ref|ZP_21618634.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|155212701|gb|ABT17422.1| proteasome beta subunit [Halorubrum sp. TP009]
gi|445676010|gb|ELZ28535.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|445698458|gb|ELZ50502.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|445701680|gb|ELZ53656.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|445812121|gb|EMA62117.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|445821863|gb|EMA71647.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
Length = 243
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V A D R S G + S+D K+ ++ + + +G + + L
Sbjct: 48 TGTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + K MS A+ L N L FF +LGG+D+EG +Y+ DA+
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLLRSGAFFVVQP--ILGGVDDEGA-HIYSIDAL 164
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y+ GSGS + L+ + D VT + EA+ + SA
Sbjct: 165 GGTTEEEYTVTGSGSQYALGVLEQEY----------DDDVT-IDEAKTI--AAKAIQSAV 211
Query: 194 ERDIYTANKLEIVVLNKDGIH 214
ERD+ + N + + V+ DG+
Sbjct: 212 ERDLASGNGINVAVVTDDGVE 232
>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 217
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V AAD R S G+ + ++ KI+ + D+ M ++G AD++ + +
Sbjct: 23 GTTTVGLVAKDSVVLAADRRASAGFFVANKMVRKIVYIDDRIGMTTAGSVADLQFIYNYM 82
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+ N+ ++ ++ L+N L ++FPY ++GG D + + ++ D +G
Sbjct: 83 KNIYHYNVISGNRPVTVKSLATYLTNVLSQSKYFPYLVQILIGGYDTQPR--LFNLDYLG 140
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASAT 193
Y + GSGS + M L +D P LS EA+DL SA
Sbjct: 141 DMTEETYVATGSGSPVAMGVL--------------EDGYRPDLSGEEAMDLGARAVLSAI 186
Query: 194 ERDIYTANKLEIVVLNKDG-IHREYMELRK 222
+RD +T + + L+KDG + RE RK
Sbjct: 187 KRDSFTGTGVIVTKLSKDGHVEREIYPNRK 216
>gi|242064246|ref|XP_002453412.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
gi|241933243|gb|EES06388.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
Length = 204
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL + + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNNEPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|222479043|ref|YP_002565280.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
gi|302595813|sp|B9LTS6.1|PSB_HALLT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|222451945|gb|ACM56210.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
Length = 243
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I AD V A D R S G + S+D K+ ++ + + +G + + L
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLIST 107
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + K MS A+ L N L F Y +LGG+D+EG +Y+ DA+
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGS-HIYSIDAL 164
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y+ GSGS + L+ + D VT EA + SA
Sbjct: 165 GGTTEEEYTVTGSGSQYALGVLEQEY----------DDDVTV---DEAKTMAAKAIQSAV 211
Query: 194 ERDIYTANKLEIVVLNKDGI 213
ERD+ + N + + V+ DG+
Sbjct: 212 ERDLASGNGINVAVVTDDGV 231
>gi|384501018|gb|EIE91509.1| hypothetical protein RO3G_16220 [Rhizopus delemar RA 99-880]
Length = 204
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+ VA+ G D AAD R+ + +S ++ KI K +K ++ G DV L
Sbjct: 7 NGGSVVAMVGKDCVAIAADKRLGAQFMTVSTEFQKIFKATEKTLIGLPGLATDVITLADR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ + +++ A+ ++S+TLY +RF PY+ V+ GLD K + + D +
Sbjct: 67 FRFKTNMYKMREEREIEPKALAHMVSSTLYERRFGPYFVEPVIAGLDKHNKPFICSMDLI 126
Query: 134 G 134
G
Sbjct: 127 G 127
>gi|212537585|ref|XP_002148948.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068690|gb|EEA22781.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+D NGG CVA+ G D A D R+ +S ++ KI A + +G DV
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVT 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
+ L + +Y+ + + +S + L+S++LY +RF PY+ V+ G+++ GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S D + L P L + + +
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTAS-------DQLFGTCEGLWEP------DLGPDDLFETIS 169
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 170 QALLNAVDRDALSGWGANVYIIEKDKVTKRLLKGRQD 206
>gi|125538349|gb|EAY84744.1| hypothetical protein OsI_06114 [Oryza sativa Indica Group]
gi|125581051|gb|EAZ21982.1| hypothetical protein OsJ_05637 [Oryza sativa Japonica Group]
Length = 213
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D + L
Sbjct: 13 FEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTL 72
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL + + + T
Sbjct: 73 YQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFICTM 132
Query: 131 DAVGSYE 137
D +G+ E
Sbjct: 133 DCIGAKE 139
>gi|448530967|ref|ZP_21620801.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
gi|445707407|gb|ELZ59261.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
Length = 243
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V A D R S G + S+D K+ ++ + + +G + + L
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + K MS A+ L N L F Y +LGG+D+EG +Y+ DA+
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDAL 164
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y+ GSGS + L+ + D VT + EA+ + SA
Sbjct: 165 GGTTEEEYTVTGSGSQYALGVLEQEY----------DDGVT-IDEAKTI--AAKAIQSAV 211
Query: 194 ERDIYTANKLEIVVLNKDGI----HREYMEL 220
ERD+ + N + + V+ DG+ ++E+ +L
Sbjct: 212 ERDLASGNGINVAVVTDDGVDITRYKEFDDL 242
>gi|448435232|ref|ZP_21586709.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
gi|445684056|gb|ELZ36442.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
Length = 243
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V A D R S G + S+D K+ ++ + + +G + + L
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + K MS A+ L N L F Y +LGG+D+EG +Y+ DA+
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDAL 164
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y+ GSGS + L+ + D VT + EA+ + SA
Sbjct: 165 GGTTEEEYTVTGSGSQYALGVLEQEY----------DDGVT-IDEAKTI--AAKAIQSAV 211
Query: 194 ERDIYTANKLEIVVLNKDGI 213
ERD+ + N + + V+ DG+
Sbjct: 212 ERDLASGNGINVAVVTDDGV 231
>gi|50419453|ref|XP_458253.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
gi|49653919|emb|CAG86329.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
Length = 206
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG+ VA+ G D A D R+ LS ++ KI +L DK + +G DV
Sbjct: 4 PSSINGGSAVAMVGKDCIAIACDLRLGNQSLGLSNNFEKIFQLGDKTFLGLTGLATDVIT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L + ++ +Y+ + +++ + L+S+TLY KRF PY+ ++ GLD++ K +
Sbjct: 64 LSETFRFKNNLYKLREEREIEPTTLANLVSSTLYEKRFGPYFVGPIVAGLDSKTNKPFIC 123
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G + + G+ S + ++ L P+ L +D +S++
Sbjct: 124 GFDLIGCIDFAKDFIVSGTASDQLYGMCES-LYEPN---LEPEDLFETISQS-------- 171
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 -LLNAVDRDALSGWGAVVYIVTKDNVTKRVLKTRQD 206
>gi|115469154|ref|NP_001058176.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|17380214|sp|Q9LST7.1|PSB3_ORYSJ RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|8671506|dbj|BAA96836.1| beta 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|51535468|dbj|BAD37365.1| 20S proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|113596216|dbj|BAF20090.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|218198634|gb|EEC81061.1| hypothetical protein OsI_23870 [Oryza sativa Indica Group]
gi|222635966|gb|EEE66098.1| hypothetical protein OsJ_22127 [Oryza sativa Japonica Group]
Length = 204
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL + + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|156036470|ref|XP_001586346.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980]
gi|154698329|gb|EDN98067.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 206
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVS 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCV 127
+ L + +Y+ + + +S M L+S++LY +RF P++ V+ GLD + GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVIAGLDQKTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + L P L +D +S+A
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEG-LWEPD---LGPEDLFETISQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 --LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
Length = 219
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A D R + G I ++ K+ K+ D M +G D ++L +L+
Sbjct: 14 GTTTVGLLCNDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLI 73
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A IY+ + M+ + L+SN L+ R +P + +LGG D +++ D VG
Sbjct: 74 SAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSLDPVG 133
Query: 135 SY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E +++ GSGS L+++ KS + AV LS SA
Sbjct: 134 GINEESSFTATGSGSPTAYGVLESEYKSDIAIEKGLLIAVKALS-------------SAM 180
Query: 194 ERDIYTANKLEIVVLNKDGI 213
+RD Y+ N + + +NKDG+
Sbjct: 181 QRDAYSGNGISLAHINKDGV 200
>gi|389847077|ref|YP_006349316.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|448614975|ref|ZP_21664003.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|388244383|gb|AFK19329.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|445753062|gb|EMA04481.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
Length = 245
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I + V A D R S G+ + S+D K+ ++ + + +G + ++L L
Sbjct: 49 GTTTVGIKTDEGVVLATDMRASLGHMVSSKDVQKVEEIHPRGALTIAGSVSAAQSLISSL 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ L+ N L F Y +LGG+D+EG +Y+ D G
Sbjct: 109 RAEVRLYESRRGEDMSMQALSTLVGNFLRSGGF--YIVQPILGGVDDEG-AHIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ + LS EA ++ SA E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLEQEFSE-------------DLSIDEAREVATKAIRSAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI 213
RD+ + N + I V+ +DG+
Sbjct: 213 RDLASGNGINIAVVTEDGV 231
>gi|126138200|ref|XP_001385623.1| hypothetical protein PICST_62487 [Scheffersomyces stipitis CBS
6054]
gi|126092901|gb|ABN67594.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 206
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG+ VA+ G D A D R+ L+ ++ KI + DK + +G +DV
Sbjct: 4 PSSINGGSAVAMVGKDCIAIACDLRLGNQSLGLANNFEKIFQFGDKTFLGLTGLASDVTT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L ++ ++ +Y+ + +Q+ + L+S+TLY KRF PY+ ++ GLD++ K +
Sbjct: 64 LSEVFRFKNNLYKLREERQIEPKTLANLVSSTLYEKRFGPYFIGPIVAGLDSKTSKPFIC 123
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G + + G+ + + ++ L P+ L +D +S+A
Sbjct: 124 GFDLIGCIDFAKDFIVSGTATDQLYGMCES-LYEPN---LEPEDLFETISQA-------- 171
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + V+ KD + + + R+D
Sbjct: 172 -LLNAVDRDALSGWGAIVYVVTKDKVVKRVLRTRQD 206
>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 202
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V + D V A + R + G I S+ KI ++AD+ M ++G D + L +++
Sbjct: 2 TTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKI 61
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GS 135
+Y+ + ++ + A+ L SN L R+FPY ++GG+D+EGK +Y+ D + G+
Sbjct: 62 EANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGK-SIYSIDPIGGA 120
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATE 194
E + GSGS L +D TP + EAV+L SA +
Sbjct: 121 IEEKDIVATGSGSLTAYGVL--------------EDRFTPEIGVDEAVELAVRAIYSAMK 166
Query: 195 RDIYTANKLEIVVLNKD 211
RD + + +++V + +D
Sbjct: 167 RDSASGDGIDVVKITED 183
>gi|21553663|gb|AAM62756.1| putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
Length = 204
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ N VA+ G + A+D R+ ++ D+ +I K+ D+ + SG DV+
Sbjct: 2 SIFEYNVSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY V+ GL ++ K +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFIC 121
Query: 129 TYDAVGSYE 137
T D++G+ E
Sbjct: 122 TMDSIGAKE 130
>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 196
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T + + D V A++ R+S G +LS+ K+ K+ K +MA +G D++ L +++
Sbjct: 7 TAIGLKVNDGIVLASERRLSYGGYVLSKQAKKVHKIG-KFLMAGAGIYGDLQTLTRIMNV 65
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
Y+ K +S A +LLS LY + P+ S + GG+D +G +Y D +GS
Sbjct: 66 EIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGP-QLYVLDPIGSL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
Y++ GSG+ + + L+++ L + AQ L+ ++ ERD
Sbjct: 125 IEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQ-------------LITKAIKASIERD 171
Query: 197 IYTANKLEIVVLNKDG 212
I + + +++ +++K G
Sbjct: 172 ITSGDGIDLAIMDKKG 187
>gi|91772427|ref|YP_565119.1| proteasome endopeptidase complex [Methanococcoides burtonii DSM
6242]
gi|121689381|sp|Q12YV7.1|PSB_METBU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|91711442|gb|ABE51369.1| Proteasome subunit beta precursor [Methanococcoides burtonii DSM
6242]
Length = 210
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A + R + G+ I S+ KI ++ D M ++G D + + +++
Sbjct: 9 GTTTVGIVCTDGVVLATEQRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVRII 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV- 133
+ +++ + + ++ + LLSN L +R++P ++GG+D G +Y+ DA+
Sbjct: 69 SVESKLFKMRRQESITIKGITTLLSNMLSGQRYYPLMVQLLIGGVDKNGP-AIYSLDALG 127
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G+ E S GSGS + L+++ ++ E VDL +A
Sbjct: 128 GNIEETRAVSTGSGSPMAYGVLEDRYTE-------------DMTVVEGVDLAIRALHNAM 174
Query: 194 ERDIYTANKLEIVVLNKDGIHR 215
+RD + +++VV+ KD R
Sbjct: 175 KRDSASGENIDVVVITKDKYER 196
>gi|242096488|ref|XP_002438734.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
gi|241916957|gb|EER90101.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
Length = 204
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL ++ +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDVPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|145514570|ref|XP_001443190.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410568|emb|CAK75793.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
++ NGG+ V + G + A D R S ++ +Y K+ K+ D ++A SG +D+
Sbjct: 5 FEYNGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLALSGLNSDIHTF 64
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
L+ +Y + N++M L++++LY +RF P++ ++ GL+N GK + TY
Sbjct: 65 YALMEKEINLYNLKENRKMKPSTFANLVASSLYERRFGPFFVTPIVAGLEN-GKPILATY 123
Query: 131 DAVG 134
D++G
Sbjct: 124 DSIG 127
>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
gi|302595754|sp|D1Z199.1|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
Length = 205
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I + V A + R + G I SRD KI +L D M +G D + L ++L
Sbjct: 8 GTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDNIAMTIAGSVGDGQRLARML 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +++ + + MS A+ LLSN L+ R F Y ++GG+D G A G
Sbjct: 68 QAESKLFELRRHGPMSINALSMLLSNLLWEYRIF--YIQVLVGGVDKSGPKLFSLDPAGG 125
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
V +SS GSGS L L+++ K QD +S + V+L SA +
Sbjct: 126 RITEVKFSSTGSGSPLAYGVLEDRYK---------QD----MSVEQGVELAAKALESAMK 172
Query: 195 RDIYTANKLEIVVL 208
RD + N ++ V+
Sbjct: 173 RDSASGNGMQFCVI 186
>gi|448576104|ref|ZP_21642147.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
gi|445729784|gb|ELZ81378.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
Length = 243
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A D R S GY + S+D K+ ++ + +G + ++L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISNL 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ L+ N L FF +LGG+D +G G +Y+ D G
Sbjct: 109 KAEVRLYEARRGEDMSMQALSTLVGNFLRSGAFFVVQP--ILGGVDEDG-GHIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ + LS EA + +A E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLEREYSD-------------DLSVDEAKQVATNAIRAAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI 213
RD+ + N + I V+ +G+
Sbjct: 213 RDLASGNGINIAVVTDEGV 231
>gi|145590322|ref|YP_001152324.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595706|sp|A4WH05.1|PSB1_PYRAR RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145282090|gb|ABP49672.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum arsenaticum
DSM 13514]
Length = 202
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 14/207 (6%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V I D V A D R++ GY I + K+ K+ D SG AD++ + L
Sbjct: 3 TTVGIVVKDGVVLATDKRVTAGYYIAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLTV 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R Y+ Q + + A+ +S L+Y R + Y +++GG+D E +Y D +G+
Sbjct: 63 RAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMVDWLGTV 122
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+ Y + GSGS L+ + L+ EAVDL +A D
Sbjct: 123 TKEKYVATGSGSPYAKGVLEVGYRG-------------DLTVEEAVDLAINAIKAAIRND 169
Query: 197 IYTANKLEIVVLNK-DGIHREYMELRK 222
+ +++V + K DG R + +K
Sbjct: 170 PGSGEGIDVVTITKRDGFKRIFTTQQK 196
>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
Length = 210
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T + + + V A++ R + G I S+ KI + D+ M ++G D +AL +
Sbjct: 8 KKGTTTIGLICGESVVLASEKRATMGSFIASKTAKKIYLVDDRIAMTTAGIVGDAQALVR 67
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
++ +Y+ + N+ M+ + LLSN + +R++PY ++GG+D +G +YT D
Sbjct: 68 IMTVELQLYKIRRNEPMTVKGISTLLSNVMNGQRYYPYIVQLLIGGIDRDG-AHLYTIDP 126
Query: 133 V-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G+ E ++ GSGS + L+N+ +S + L S
Sbjct: 127 FGGNTEESEIAATGSGSPIAYGVLENKYTK-------------DISLEKGTALAIQALYS 173
Query: 192 ATERDIYTANKLEIVVLNKD 211
A +RD + +E+V + KD
Sbjct: 174 AIKRDSASGEAIEVVTITKD 193
>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 196
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 15/196 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V + D V A++ R+S G +LS+ K+ K+ +K +MA +G D++ L +++
Sbjct: 7 TAVGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKI-NKFLMAGAGIYGDLQTLTRIMNV 65
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
Y+ K +S A +LLS LY + P+ S + GG+D +G +Y D +GS
Sbjct: 66 EIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGP-QLYVLDPIGSL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
Y++ GSG+ + + L+++ P+ +S A L+ ++ ERD
Sbjct: 125 IEDNYAAVGSGARIAIGVLESEY-DPN------------MSLDVATQLITKAIKASIERD 171
Query: 197 IYTANKLEIVVLNKDG 212
I + + +++ +++K G
Sbjct: 172 ITSGDGIDLAIIDKKG 187
>gi|217075224|gb|ACJ85972.1| unknown [Medicago truncatula]
Length = 204
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I K+ DK + SG D +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDSQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + M L+S+ Y KRF PY+ V+ GL ++ K +
Sbjct: 62 TLYQRLVFRHKLYQLREECDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 129 TYDAVGSYE 137
T DA+G+ E
Sbjct: 122 TMDAIGAKE 130
>gi|448488453|ref|ZP_21607289.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
gi|445696143|gb|ELZ48236.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
Length = 243
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A D R S G + S+D K+ ++ + + +G + + L L
Sbjct: 49 GTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + K MS A+ L N L F Y +LGG+D+EG +Y+ DA+G
Sbjct: 109 RAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDALG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y+ GSGS + L+ + D VT EA ++ SA E
Sbjct: 166 GTTEEEYTVTGSGSQYALGVLEQEY----------DDDVTI---DEAKNIAAKAIQSAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI 213
RD+ + N + + V+ DG+
Sbjct: 213 RDLASGNGINVAVVTDDGV 231
>gi|406868327|gb|EKD21364.1| proteasome subunit beta type-3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 212
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI D + +G DV
Sbjct: 10 SPFSINGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKIFSYGD-VYLGLTGLATDVS 68
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCV 127
+ L + +Y+ + + +S M L+S++LY KRF PY+ V+ G+D + GK +
Sbjct: 69 TVSDLFRYKVNMYRLREERNISPSTMANLVSSSLYEKRFGPYFVSPVVAGIDQKSGKPFI 128
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + + P L P +D +S+A
Sbjct: 129 CGFDSIGCIDFAKDFIVGGTASDQLFGTCEGLWE---PDLAP-EDLFETISQA------- 177
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 178 --LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 212
>gi|413943569|gb|AFW76218.1| hypothetical protein ZEAMMB73_756098 [Zea mays]
Length = 204
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL ++ +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCLGAKE 130
>gi|413935900|gb|AFW70451.1| proteasome subunit beta type [Zea mays]
Length = 305
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D +
Sbjct: 103 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDAQ 162
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + M L+S LY KRF PY+ V+ GL + + +
Sbjct: 163 TLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFIC 222
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 223 TMDCIGAKE 231
>gi|315428112|dbj|BAJ49699.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 168
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 79/143 (55%), Gaps = 1/143 (0%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + I G D V AA+ R + GY ++S+ K+ K+++ A +G AD++ + K +
Sbjct: 17 GATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMIKEV 76
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + S + ++LS L+ R+FPY+ ++GG+D++G V D +G
Sbjct: 77 TAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGP-HVIVLDPLG 135
Query: 135 SYERVGYSSQGSGSTLIMPFLDN 157
S Y+ G+G+ + + ++N
Sbjct: 136 SMIEDDYAVVGTGAEVAVGVIEN 158
>gi|403223804|dbj|BAM41934.1| proteasome subunit beta type [Theileria orientalis strain Shintoku]
Length = 206
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSI-LSRDYSKIIKLADKCVMASSGFQADVKALQK 72
NGG VA+ G A D R+ I + ++ K K+ D C A+SG D++ L+
Sbjct: 8 NGGAVVAMMGEGCVAIACDKRLGFNQQITVGSNFPKAFKVTDNCFFAASGLATDIQTLKD 67
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+ + +YQ + KQM+ + ++ LY KRF P++ +V+ GLD++ + + +D
Sbjct: 68 EIMFKVNMYQMRGEKQMNVKTLSNMVGTMLYSKRFGPWFVDSVIAGLDSKNEPYITCFDL 127
Query: 133 VGS------YERVGYSSQ---GSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
VG+ + VG S+ G L P L+ E +
Sbjct: 128 VGAPCTPTDFVVVGTCSEQLYGVCEALFRP---------------------GLNADELFE 166
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ C + +RD + E+ V+ D + ++ R D
Sbjct: 167 TISQCLMAGIDRDCLSGWGAEVHVITPDKVVSRSLKTRMD 206
>gi|307106214|gb|EFN54460.1| hypothetical protein CHLNCDRAFT_31571 [Chlorella variabilis]
Length = 225
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
+ G T VA+ V AD+R+STG I +R KI LAD + SG AD +A+
Sbjct: 15 HTGTTVVAVCFDGGVVVGADSRVSTGTYISNRASDKITPLADNVYLLRSGSAADTQAVAD 74
Query: 73 LLAARHLIYQHQHNKQMS--CPAMGQLLSNTLY-YKRFFPYYSFNVLGGLDNEGKGCVYT 129
+ R+ QH+ Q + + QL+ Y YK ++ G D + G VY
Sbjct: 75 YV--RYFTEQHEMQLQRTPGVRTVAQLVREMNYQYKHLV---GAMIVAGWDEDEGGQVYG 129
Query: 130 YDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCF 189
G+ R +++ GSGST I FLD++ K + +A DLV
Sbjct: 130 CPIGGTISREPWTTDGSGSTFIWGFLDSEFKD-------------GMGRQDAEDLVAMAL 176
Query: 190 ASATERDIYTANKLEIVVLNKDGIHREYM 218
A A RD + + +V ++K+G R +
Sbjct: 177 ALAMSRDGSSGGVIRLVTVSKEGATRRLI 205
>gi|355714007|gb|AES04858.1| proteasome subunit, beta type, 1 [Mustela putorius furo]
Length = 100
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADV 67
+SPY NGGT +AIAG D+ + A+DTR+S GYSI +RD K KL DK V+ SGF D
Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKLTDKTVIGCSGFHGDC 89
Query: 68 KALQKLLAAR 77
L K++ AR
Sbjct: 90 LTLTKIIEAR 99
>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595741|sp|A3MS44.1|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126248370|gb|ABO07461.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum calidifontis
JCM 11548]
Length = 201
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V I D V A D R++ GY I + KI K+ D SG AD++++ L+
Sbjct: 3 TTVGIVAKDGVVLATDKRVTAGYYIAHKAGEKIWKIDDHVAATMSGGVADLQSVLSFLSL 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R Y+ +H + + A+ +S L+Y R + Y +++GG+D E +Y D +G+
Sbjct: 63 RAREYRVEHKRPIPIRALVNYVSLLLFYSRPYIYLVHSIVGGVDAEEGPVLYMVDWLGTV 122
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+ Y + GSGS P+ L+ + +D L+ EAV+L +A D
Sbjct: 123 TKEKYIATGSGS----PYAKGALE-----VAYRED----LTIDEAVELAIRAVKAAIRND 169
Query: 197 IYTANKLEIVVLNK-DGIHREYMELRK 222
+ +++V + K DG R + +K
Sbjct: 170 PGSGEGIDVVTITKSDGFRRVFTTQQK 196
>gi|385806007|ref|YP_005842405.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
gi|383795870|gb|AFH42953.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
Length = 211
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V + D + AAD R + G I R KI+K+ DK + ++G AD + L
Sbjct: 18 HGTTTVGLIAKDAVILAADRRATAGTFIAHRKTRKILKITDKMALTTAGLVADAQVLADW 77
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L + + ++ LLS LY + FP+Y +LGG D + +++ D
Sbjct: 78 LNTQMNYLTITKKQPVTVREAAHLLSLLLYRYKLFPFYVQLILGGYDTAPR--LFSLDLY 135
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS Y+S GSGS + + L++ + +S EA L A
Sbjct: 136 GSLVEEKYTSTGSGSPIAIGVLEDGYRE-------------NMSPEEARKLAVKAVQMAL 182
Query: 194 ERDIYTANKLEIVVLNKDGI 213
+RD T + ++ V++ +GI
Sbjct: 183 KRDSATGDGVDSVIITSEGI 202
>gi|18312192|ref|NP_558859.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74565305|sp|Q8ZYF2.1|PSB1_PYRAE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18159629|gb|AAL63041.1| proteasome beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 202
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V IA D V A D R++ GY I + KI K+ D SG AD++++ L
Sbjct: 3 TTVGIAVKDGVVLATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLTL 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R Y+ ++ + + A+ +S L+Y R + Y +++GG+D E +Y D +G+
Sbjct: 63 RAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWLGTV 122
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+ Y + GSGS P+ L+ + +D AVDL +A D
Sbjct: 123 TKEKYIATGSGS----PYAKGALEVGYREDMTLED---------AVDLAIKAVKAAIRND 169
Query: 197 IYTANKLEIVVLN-KDGIHREYMELRK 222
+ +++VV+ K+G R + +K
Sbjct: 170 PGSGEGIDVVVITRKEGFKRVFTTQQK 196
>gi|300711728|ref|YP_003737542.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|448296163|ref|ZP_21486224.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
gi|445582886|gb|ELY37226.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
Length = 247
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A D R S G + S+ K+ + + +G + ++L + L
Sbjct: 47 GTTTVGLRAEDGVVLATDMRASLGNMVSSKTVQKVEDVHPTGALTIAGSVSAAQSLIRTL 106
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y + + MS A+ L SN L FF VLGG+D+EG +Y+ DA+G
Sbjct: 107 RAEVNLYDARQGEDMSMTALSTLTSNLLRSGGFF--IVVPVLGGVDDEGP-HIYSMDALG 163
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y+ GSGS + L+ + LS EA D+ SA E
Sbjct: 164 GTTEETYAVSGSGSQFALGVLEQHYEEG-------------LSVEEARDVAIRSVGSAVE 210
Query: 195 RDIYTANKLEIVVLNKDGIHREYME 219
RD + N + I + ++G+ E E
Sbjct: 211 RDTASGNGINIATVTEEGVDIERFE 235
>gi|145514243|ref|XP_001443032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410393|emb|CAK75635.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
++ NGG+ V + G + A D R S ++ +Y K+ K+ D ++A SG +D+
Sbjct: 5 FEYNGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLALSGLNSDIHTF 64
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
L+ +Y + N++M L+++ LY +RF P++ ++ GL+N GK + TY
Sbjct: 65 YALMEKEINLYNLKENRKMKPTTFANLVASALYERRFGPFFVTPIVAGLEN-GKPILATY 123
Query: 131 DAVG 134
D++G
Sbjct: 124 DSIG 127
>gi|159041872|ref|YP_001541124.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
IC-167]
gi|302595705|sp|A8M8R5.1|PSB2_CALMQ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|157920707|gb|ABW02134.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
Length = 200
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLA 75
GT V I D V AA+ R+S G+ ++S+ K+ + ++ +ASSG AD++ + K++
Sbjct: 10 GTTVGIKAKDGVVLAAEKRVSYGFYLMSKSGKKVYPITNRIGLASSGILADIQTITKVIR 69
Query: 76 ARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
A + + + +S A +LLS L+ ++ PY + ++GG+D EG ++ D+ GS
Sbjct: 70 ANIANMEIEMKRPVSVRAAAKLLSIMLFQNKYMPYIAETMVGGIDEEGP-KLFILDSWGS 128
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
+++ G+G+ + ++ S ++ EA +L A R
Sbjct: 129 LIEDDFAALGNGARTAIGLIETGYSS-------------SITVKEAKELAIKAIKEAIAR 175
Query: 196 DIYTANKLEIVVLNKDGIHREYMEL 220
D + + ++ +V+ +G + ++L
Sbjct: 176 DPTSGDGIDTLVITGNGYLEDSIKL 200
>gi|226505280|ref|NP_001141963.1| uncharacterized protein LOC100274112 [Zea mays]
gi|194706600|gb|ACF87384.1| unknown [Zea mays]
Length = 204
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL ++ +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCLGAKE 130
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A D R + G I ++ K+ K+ D M +G D ++L +L+
Sbjct: 14 GTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLI 73
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A IY+ + M+ + L+SN L+ R +P + +LGG D +++ D VG
Sbjct: 74 SAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSLDPVG 133
Query: 135 SY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E +++ GSGS L+ + +S + AV LS SA
Sbjct: 134 GINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALS-------------SAM 180
Query: 194 ERDIYTANKLEIVVLNKDGIH 214
+RD Y+ N + + +NKDG++
Sbjct: 181 QRDAYSGNGISLAHINKDGVN 201
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I + V A D R S GY + S+D K+ ++ + +G + ++L L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ L+ N L F Y +LGG+D G +Y+ D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ + K LS EA + SA E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLEQEFKD-------------GLSIEEAKQVATKAIRSAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI 213
RD+ + N + I V+ +DG+
Sbjct: 213 RDLASGNGINIAVVTEDGV 231
>gi|226504734|ref|NP_001140276.1| uncharacterized protein LOC100272320 [Zea mays]
gi|194698808|gb|ACF83488.1| unknown [Zea mays]
Length = 204
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + M L+S LY KRF PY+ V+ GL + + +
Sbjct: 62 TLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|413954658|gb|AFW87307.1| proteasome subunit beta type [Zea mays]
Length = 204
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M L+S LY KRF PY+ V+ GL ++ +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCLGAKE 130
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A D R S G + S+D K+ ++ + +G + ++L +
Sbjct: 49 GTTTVGLKTQDGTVLATDMRASLGRMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSI 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ LL N L FF +LGG+D++G +Y+ D G
Sbjct: 109 RAEVRLYEARRGEDMSMEALSTLLGNFLRSGGFFIVQP--ILGGVDDDGP-HIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ Q LS EA + SA E
Sbjct: 166 SIIEEEYTVTGSGSQYALGVLEQQYNE-------------DLSIEEAKTVAARSIESAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI----HREYMEL 220
RD+ + N + + V+ +DG+ H ++ EL
Sbjct: 213 RDLASGNGINVCVVTEDGVEITQHEDFEEL 242
>gi|156095029|ref|XP_001613550.1| 20S proteasome subunit beta-3 [Plasmodium vivax Sal-1]
gi|148802424|gb|EDL43823.1| 20S proteasome subunit beta-3, putative [Plasmodium vivax]
Length = 218
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 13/222 (5%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRM-STGYSILSRDYSKIIKLADKCVMASSGFQADV 67
S ++ NGG + ++GA A D R+ + ++ +S +++KI K+ D + SG D+
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDI 62
Query: 68 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYY------SFNVLGGLDN 121
+ L +LL R +Y+ + M +LS+ LY RF PY+ F V LD+
Sbjct: 63 QTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDD 122
Query: 122 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA 181
EGK + +Y+ +G + F+ N + S + + +
Sbjct: 123 EGKKVCSFEPYLTAYDLIGAKCETK------DFVVNGVTSEQLYGMCESLYIKDQDKDGL 176
Query: 182 VDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ + C SA +RD + E+ VL D I ++ ++ R D
Sbjct: 177 FETISQCLLSALDRDCLSGWGAEVYVLTPDTIMKKKLKARMD 218
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A D R S GY + S+D K+ ++ + +G + ++L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ L+ N L F Y +LGG+D G +Y+ D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ + + LS EA + SA E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLEQEFED-------------GLSIDEAKQVATKAIRSAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI 213
RD+ + N + I V+ +DG+
Sbjct: 213 RDLASGNGINIAVVTEDGV 231
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A D R S GY + S+D K+ ++ + +G + ++L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ L+ N L F Y +LGG+D G +Y+ D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ + + LS EA + SA E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLEQEFED-------------GLSIDEAKQVATKAIRSAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI 213
RD+ + N + I V+ +DG+
Sbjct: 213 RDLASGNGINIAVVTEDGV 231
>gi|167043167|gb|ABZ07876.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_ANIW141J13]
Length = 208
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V I +D V AD R S GY I + + KI K+ D + +G AD + L +
Sbjct: 9 HGTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGLTLAGGVADAQNLTDI 68
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L ++ Q N+ + ++ +L S + R +P+ + +LGG D +G ++ D
Sbjct: 69 LRYHANVHAVQKNENIPIKSLARLCSLVFHQNRGYPFIADILLGGYDRDGP-ALFNIDMF 127
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E+ Y + GSGS + L+++ + D +T L +A+ + L +A
Sbjct: 128 GSVEKKSYVTTGSGSPVAYGVLEDEYR----------DDLT-LEDAKLIAL--RAVKAAI 174
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRK 222
R+I T + + I +NK+G E +K
Sbjct: 175 VRNIGTGDGINIAAINKNGFQLLTKEQKK 203
>gi|296805183|ref|XP_002843416.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
gi|238844718|gb|EEQ34380.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
Length = 223
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASS 61
T P ++P D GG CVA+ G D A D R+ +S ++ KI A + +
Sbjct: 15 TNSSPDYAPLD--GGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLT 72
Query: 62 GFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN 121
G DV + +LL + +Y+ + + +S + L+S++LY KRF P++ VL G+++
Sbjct: 73 GLATDVNTVSQLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINH 132
Query: 122 -EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 179
GK V +D++G + + G+ S + ++ L P L +D +S+A
Sbjct: 133 TTGKPFVCGFDSIGCIDFAKNFIVSGTASDQLYGTCES-LWEPD---LEPEDLFETISQA 188
Query: 180 EAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 189 ---------LLNAVDRDALSGWGAYVYIIEKDKVTKRKLKGRQD 223
>gi|448591212|ref|ZP_21650891.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
gi|445733768|gb|ELZ85333.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
Length = 243
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A D R S GY + S+D K+ ++ + +G + ++L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISNL 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ L+ N L FF +LGG+D +G G +Y+ D G
Sbjct: 109 KAEVRLYEARRGEDMSMQALSTLVGNFLRSGAFFVVQP--ILGGVDEDG-GHIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ + L+ EA + +A E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLEREYSD-------------DLTVDEAKQVATNAIRAAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI 213
RD+ + N + I V+ +G+
Sbjct: 213 RDLASGNGINIAVVTDEGV 231
>gi|357475641|ref|XP_003608106.1| Proteasome subunit beta type [Medicago truncatula]
gi|355509161|gb|AES90303.1| Proteasome subunit beta type [Medicago truncatula]
gi|388497742|gb|AFK36937.1| unknown [Medicago truncatula]
Length = 204
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%)
Query: 11 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKAL 70
+ +NG VA+ G + A+D R+ ++ D+ +I K+ DK + SG D + L
Sbjct: 4 FKHNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLYIGLSGLATDSQTL 63
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
+ L RH +YQ + M L+S Y KRF PY+ V+ GL ++ K + T
Sbjct: 64 YQRLVFRHKLYQLREELDMKPETFASLVSAMQYEKRFGPYFCQPVIAGLGDDDKPFICTM 123
Query: 131 DAVGSYE 137
DA+G+ E
Sbjct: 124 DAIGAKE 130
>gi|308799609|ref|XP_003074585.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
gi|116000756|emb|CAL50436.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
Length = 203
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 19 VAIAGADYCVTAADTRMSTGYS-ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAAR 77
VA+ G D A+D R+ + + DYSK+ K+ DK + +G AD L + L +
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 78 HLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
H +Y+ + N+ MS ++S TLY KRF PYY+ V+ GLD +GK + + D +G+
Sbjct: 70 HDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDKDGKPYITSMDLIGA 127
>gi|294929626|ref|XP_002779296.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239888359|gb|EER11091.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMAS 60
+ +H + + + NGG+ +A+ G A D R +S + K+ + +C++
Sbjct: 234 SNKHSSGNIMEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGF 293
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
G D + L +LL R +Y+ + +++M C + L++ LY KRF PY+ V+ GL
Sbjct: 294 QGLATDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLK 353
Query: 121 NEGKGCVYTYDAVGS 135
N+G+ + ++D +G+
Sbjct: 354 NDGEPFISSFDLIGT 368
>gi|344299526|gb|EGW29879.1| hypothetical protein SPAPADRAFT_63501 [Spathaspora passalidarum
NRRL Y-27907]
Length = 206
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P+ NGG+ VA+ G D A+D R+ +S ++ KI DKC + +G DV
Sbjct: 4 PFSINGGSAVAMVGKDCIAIASDLRLGNQSLGVSNNFEKIFGFGDKCFLGLTGLATDVLT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCVY 128
L++ + +Y+ + + + + L+S+TLY +RF PY+ ++ GL + + K +
Sbjct: 64 LKETFRFKTNLYKLREERSIEPETLANLVSSTLYERRFGPYFVSPIVAGLGHKDNKPFIC 123
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D++G + + G+ S + ++ + P L P Q + +
Sbjct: 124 GFDSIGCIDFAKDFIVSGTASDQLYGMCESLYE---PDLEPEQ----------LFETISQ 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 171 ALLNAVDRDALSGWGAVVYIVTKDKVVKRVLKTRQD 206
>gi|294879946|ref|XP_002768837.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239871775|gb|EER01555.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 2 TKQHPAWSPYDNNGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMAS 60
+ +H + + + NGG+ +A+ G A D R +S + K+ + +C++
Sbjct: 234 SNKHSSGNIMEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGF 293
Query: 61 SGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
G D + L +LL R +Y+ + +++M C + L++ LY KRF PY+ V+ GL
Sbjct: 294 QGLATDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLK 353
Query: 121 NEGKGCVYTYDAVGS 135
N+G+ + ++D +G+
Sbjct: 354 NDGEPFISSFDLIGT 368
>gi|332796202|ref|YP_004457702.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332693937|gb|AEE93404.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 209
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AAD R S G+ + ++ KI+ + D + ++G AD++ L +L
Sbjct: 11 GTTTVGILAKDGVVLAADRRASEGFFVANKMVRKILYITDNIGITTAGSVADLQFLYYVL 70
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+ N+ + A+ L+NTL ++FPY ++GG D + + +Y D G
Sbjct: 71 KNLYHYNYISGNRPTTVKALATYLANTLSQNKYFPYLVQILIGGYDTQPR--LYNLDYFG 128
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y + GSGS + M L+++ + L+ +A+D+ SA +
Sbjct: 129 DMTEEKYVATGSGSPVAMGVLEDEYRE-------------DLTADQAMDIAARAVLSAIK 175
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELRK 222
RD YT + + + K G + + LRK
Sbjct: 176 RDSYTGTGVIVSKITKTGHVEKEVYLRK 203
>gi|190348459|gb|EDK40915.2| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 14/215 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P+ NGG VA+ G D A DTR+ + L+ ++ K+ ++ + +G DV
Sbjct: 4 PFSINGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFLGLTGLATDVIT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
L++ ++ +Y+ + ++M + L+S +LY +RF PY+ ++ GL G+ +
Sbjct: 64 LREDFRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLGKGGQPFICG 123
Query: 130 YDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+D++G + + G+ S + ++ L P+ L +D +S+A
Sbjct: 124 FDSIGCIDFAKDFIVSGTASDQLYGTCES-LYEPN---LEPEDLFETISQA--------- 170
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + V+ K+ + R + R+D
Sbjct: 171 LLNAVDRDALSGWGAVVYVVTKEKVVRRVLRTRQD 205
>gi|189205423|ref|XP_001939046.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975139|gb|EDU41765.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 205
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + D + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVS 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + +S M L+S++LY KRF PY+ V+ G++ GK +
Sbjct: 62 TVSDLFRYKVNMYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S D + L P L + + +
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTAS-------DQLFGTCEGLWEP------DLGPEDLFETIS 168
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 169 QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|389852762|ref|YP_006354996.1| proteasome, subunit beta [Pyrococcus sp. ST04]
gi|388250068|gb|AFK22921.1| putative proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 173
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 41 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 100
+ +R+ +KI K+ + +A +G D+ +L +LL A +Y+ K MS A+ LL+N
Sbjct: 2 VYARNVTKIHKVDEHLAIAGAGDVGDILSLVRLLRAEARLYKANVGKPMSVKALATLLAN 61
Query: 101 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 160
L ++FPY+ + ++GG D E + +++ D G Y + GSG LD++ K
Sbjct: 62 ILNGTKYFPYFVWFLVGGYDEEPR--MFSVDMAGGVTEDKYVAAGSGMEFAYSVLDSEYK 119
Query: 161 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREY 217
LS E + L A +RD+++ + + +V + ++G ++EY
Sbjct: 120 E-------------DLSVKEGIKLAVKAINVAIKRDVFSGDGILVVTITREG-YQEY 162
>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 206
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V + +Y V AAD R + G + + KI+++ M SG AD + L + A
Sbjct: 9 TTVGLVAGEYVVLAADKRATAGPMVYHKRVRKIMEITPYAAMTISGLVADAQFLVE--NA 66
Query: 77 RHLI--YQHQHNKQMSCPAMGQLLSNTL-YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+++ Y+ + K++S A+ +S L Y RF P+ +LGG+D+EG +Y D
Sbjct: 67 KYIAKDYELKMGKRISIDALASRISLILSAYLRFSPFIVQLLLGGVDHEGP-KLYYMDLY 125
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS R + S GSGS + L+ + L+ EA +L +SA
Sbjct: 126 GSVSRERFMSTGSGSPVAFGVLEQGYREG-------------LTLEEAKELAFKAVSSAI 172
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRK 222
RD +T ++IVV+ +GI E +K
Sbjct: 173 MRDSFTGEGVDIVVIGPEGISEETRLFKK 201
>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595814|sp|B1L6X8.1|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 198
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 15/196 (7%)
Query: 27 CVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN 86
V AAD R+S ILS+ K+ + ++ ++++G D + L +L +Y+ ++
Sbjct: 15 VVLAADRRVSYNGFILSKSARKVFLINERVGVSTAGLPGDFQELVDVLKYNITMYELENE 74
Query: 87 KQMSCPAMGQLLSNTLYYKRFFP-YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQG 145
K + + +LLS LY RF YY+ V+GG+DN G ++ D G +S+ G
Sbjct: 75 KAATPTNVAKLLSILLYQGRFSGIYYAELVVGGIDNSGP-KIFVLDPAGGLMEENFSAVG 133
Query: 146 SGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEI 205
SG+ + L+ K +SE EAV+L + A RD + + +++
Sbjct: 134 SGAQIATGILERFFKE-------------GMSEKEAVELAERAMREAISRDALSGDGIDL 180
Query: 206 VVLNKDGIHREYMELR 221
+++ G E++ +R
Sbjct: 181 LIITSKGSRMEFIPVR 196
>gi|448536903|ref|XP_003871223.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis Co
90-125]
gi|380355579|emb|CCG25098.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis]
Length = 245
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 108/228 (47%), Gaps = 18/228 (7%)
Query: 1 MTKQH---PAWSPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCV 57
+ QH P P+ NGG VA+ G D A+D R+ + +S ++ K+ + DK
Sbjct: 31 LPTQHNYVPMSDPFSINGGAAVAMIGKDCVAIASDLRLGSQSLGVSNNFEKVFEFGDKTY 90
Query: 58 MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLG 117
MA +G DV L++L + +Y+ + + + + L+S++LY +RF P++ ++
Sbjct: 91 MALTGLATDVITLRELFKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFVGPIVA 150
Query: 118 GLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 175
GL + + K + +D++G + + G+ + + + L P+ L +D
Sbjct: 151 GLSSKDNKPFICGFDSIGCIDYSHDFIVSGTATDQLYGMCEG-LYEPN---LEPEDLFET 206
Query: 176 LSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+S+A +A +RD + + ++ KD + + ++ R+D
Sbjct: 207 ISQA---------LLNAVDRDALSGWGAVVYIITKDKVVKRVLKTRQD 245
>gi|379005397|ref|YP_005261069.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
gi|375160850|gb|AFA40462.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
Length = 202
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 14/207 (6%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V I D V A D R++ GY I + K+ K+ D SG AD++ + L
Sbjct: 3 TTVGIVVKDGVVLATDKRVTAGYYIAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLTV 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R Y+ Q + + A+ +S L+Y R + Y +++GG+D E +Y D +G+
Sbjct: 63 RAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMVDWLGTV 122
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+ Y + GSGS L+ + L+ EAVDL +A D
Sbjct: 123 TKEKYVATGSGSPYAKGVLEVGYRG-------------DLTVEEAVDLAINAIKAAIRND 169
Query: 197 IYTANKLEIVVLNK-DGIHREYMELRK 222
+ +++V + K +G R + +K
Sbjct: 170 PGSGEGIDVVTITKREGFKRIFTTQQK 196
>gi|71029220|ref|XP_764253.1| proteasome subunit beta type 3 [Theileria parva strain Muguga]
gi|68351207|gb|EAN31970.1| proteasome subunit beta type 3, putative [Theileria parva]
Length = 206
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSI-LSRDYSKIIKLADKCVMASSGFQADVKALQK 72
NGG VA+ G A D R+ + +S ++ K K+ + C A+SG DV+ L++
Sbjct: 8 NGGAVVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQTLKE 67
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+ + +Y+ + +K+MS + ++ LY +RF P++ +V+ GLDN+ + +D
Sbjct: 68 EIMFKVNMYKLRGDKEMSVKTLSNMVGAMLYSRRFGPWFVDSVIAGLDNDSSPYITCFDL 127
Query: 133 VGS------YERVGYSSQ---GSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 183
VG+ + G S+ G L P +D P L +
Sbjct: 128 VGAPCTPSDFVVAGTCSEQLYGVCEALFKPGMD-----PEQLF----------------E 166
Query: 184 LVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
V C + +RD + E+ V+ D + ++ R D
Sbjct: 167 TVSQCLMAGIDRDCLSGWGAEVHVITPDRVISRSLKTRMD 206
>gi|407463311|ref|YP_006774628.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046933|gb|AFS81686.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 210
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V I D V AD R S GY I + + KI K+ D + +G AD + + +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDI 70
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L +++ + + +S ++ +L S + R +P+ + ++GG D EG ++ D
Sbjct: 71 LRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDTEGP-ALFNIDMF 129
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E+ Y + GSGS + L+ + K L+ EA + +A
Sbjct: 130 GSVEKKSYVTTGSGSPVAYGLLEEEYKE-------------DLTVEEAKKIALRAVKAAI 176
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRK 222
R+I T + + I V++KDG E +K
Sbjct: 177 VRNIGTGDGINIAVMDKDGFRLLTEEQKK 205
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A++ R S G + + KI K+ + +G AD + L K++
Sbjct: 9 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKIDNHIAATIAGSVADAQTLMKVI 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A +Y+ ++ K +S A + SN L+ P Y ++GG+D+ G +Y+ DA G
Sbjct: 69 SAETSLYRLRNGKDISLEAAAAVSSNILHSS---PAYVQTLIGGVDDTG-ASIYSLDAAG 124
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
+ + S GSGST L+++ ++ EA ++ +ATE
Sbjct: 125 GMIKDTFISTGSGSTFAYGVLEDRFYED-------------ITVEEATEVAIRAIKAATE 171
Query: 195 RDIYTANKLEIVVLNKDG 212
RD ++ N + + KDG
Sbjct: 172 RDTFSGNGFLVANVTKDG 189
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A++ R S G + + KI K+ D V +G D + L K++
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +YQ ++N +MS A + +N L R P Y +LGG+D + K +Y+ D G
Sbjct: 68 EAEVSLYQMRNNDKMSVKAAASVTANIL---RSGPMYVQTLLGGMDGD-KPSLYSLDPAG 123
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y S GSGS + L+++ ++ E +++ +A+E
Sbjct: 124 GMIEDTYISTGSGSIVAYGVLEDRYHEE-------------ITTDEGLEIAVRAIKAASE 170
Query: 195 RDIYTANKLEIVVLNKDG 212
RD ++ N + + KDG
Sbjct: 171 RDTFSGNGYLVAKVTKDG 188
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A + R S G I + KI K+ D +G +D + L +
Sbjct: 9 GTTTVGVTCKDGIVFATERRASMGNLIAHKVADKIFKIDDHIGATIAGSVSDAQKLMGYI 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A +Y+ ++ MS A + SN L+ RF+PYY +LGG+D +G +++ D G
Sbjct: 69 SAEVALYRLRNGAPMSVEAAANMTSNILHASRFYPYYVQTLLGGVDEKGP-ALFSLDPSG 127
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
+ S GSGS + L+++ + E +V +A E
Sbjct: 128 GVIKDLMISTGSGSPVAYGVLEDRYNQEMDI-------------EEGTSVVIRAIKAAME 174
Query: 195 RDIYTANKLEIVVLNKD 211
RD Y+ N +++ + K+
Sbjct: 175 RDTYSGNGIKVATITKE 191
>gi|435851174|ref|YP_007312760.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661804|gb|AGB49230.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 210
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I V A + R + G+ I S+ KI ++ D M ++G D + + ++
Sbjct: 8 KGTTTVGIVCDKGVVLATERRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVRV 67
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
++ +Y+ + + M+ + LLSN L +R++P ++GG+D G +++ DA+
Sbjct: 68 MSVESHLYKMRRKEPMTIKGITTLLSNILSGQRYYPLMVQLLVGGVDKNGP-AIFSLDAL 126
Query: 134 -GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G+ E + GSGS + L+++ V LS E V+L +A
Sbjct: 127 GGTIEETKAVATGSGSPMAYGVLEDRF-------------VDGLSIEEGVELAIRALHNA 173
Query: 193 TERDIYTANKLEIVVLNKDGIHR 215
+RD + N +++VV+ D R
Sbjct: 174 MKRDSASGNGIDVVVITADKFDR 196
>gi|310793894|gb|EFQ29355.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 205
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + D + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVT 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ L+S++LY +RF PY+ V+ GLD GK +
Sbjct: 62 TVGDLFRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + ++ L P L E + +
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCES-LWEPD------------LGPEELFETIS 168
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 169 QSLLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|171184537|ref|YP_001793456.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595728|sp|B1YA36.1|PSB1_THENV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170933749|gb|ACB39010.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 201
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V IA + V A D R++ GY I + KI K+ D SG AD++++ L
Sbjct: 3 TTVGIAVREGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSVLSFLTL 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
R Y+ ++ + + A+ +S L+Y R + Y +++GG+D+E +Y D +G+
Sbjct: 63 RAREYKMEYKRPIPIRALVNYVSLILFYSRPYIYIVHSIIGGVDDEEGAVLYMADWLGTV 122
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+ Y + GSGS P+ L+ + +D AVDL +A D
Sbjct: 123 TKERYIATGSGS----PYAKGALEVGYREDMSLED---------AVDLAIKAVKAAIRND 169
Query: 197 IYTANKLEIVVLNK-DGIHREYMELRK 222
+ +++VV+ K +G R + +K
Sbjct: 170 PGSGEGIDVVVITKREGFRRVFTAQQK 196
>gi|378754521|gb|EHY64552.1| hypothetical protein NERG_02362 [Nematocida sp. 1 ERTm2]
Length = 204
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
GG+ +A+ G D V AD R S L +++++ K+ D+ +++ +GF D + L K L
Sbjct: 8 GGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRLYKITDRIILSLTGFVPDCQVLYKTL 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+++ +++ LLS LY KRF P+ ++ G D E VYT D +G
Sbjct: 68 RKHVTMFKLSQQREIEPKEFSSLLSYILYSKRFSPFLISPLIAGFDRENNPHVYTMDLIG 127
>gi|50556674|ref|XP_505745.1| YALI0F22341p [Yarrowia lipolytica]
gi|49651615|emb|CAG78556.1| YALI0F22341p [Yarrowia lipolytica CLIB122]
Length = 206
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
+P + NGG+CVA+ G D A D RM + +S D+ K+ D + +G DV+
Sbjct: 3 NPQEINGGSCVAMVGKDCVAIACDLRMGSQGLGVSNDFEKVFNYGDNVYLGLTGLATDVQ 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCV 127
L ++ + +Y+ +Q+ L+S+TLY KRF PY+ ++ G++++ K +
Sbjct: 63 TLHEVFREKTNLYKMAEERQIEPETFANLVSSTLYEKRFGPYFVGPIVAGINSKTEKPFI 122
Query: 128 YTYDAVGSYE 137
+D +G +
Sbjct: 123 CGFDLIGCID 132
>gi|451848501|gb|EMD61806.1| hypothetical protein COCSADRAFT_38618 [Cochliobolus sativus ND90Pr]
Length = 205
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + D + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVS 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + +S M L+S++LY +RF PY+ V+ G++ GK +
Sbjct: 62 TVSDLFRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S D + L P L + + +
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTAS-------DQLFGTCEGLWEP------DLGPEDLFETIS 168
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 169 QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|15679213|ref|NP_276330.1| proteasome subunit beta [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6685781|sp|O27270.1|PSB_METTH RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2622311|gb|AAB85691.1| proteasome, beta subunit [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 210
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A + R S G I + KI K+ + +G AD ++L K L
Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYL 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ ++++++S A L +N L+ RF+P+ +LGG+D G +Y+ D G
Sbjct: 69 KAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENG-AKIYSLDPSG 127
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
+ S GSGS + L+++ L EAVD+ SA E
Sbjct: 128 GMIPDKFVSTGSGSPVAYGVLEDRYSD-------------ELYVDEAVDVAIRAIKSAME 174
Query: 195 RDIYTANKLEIVVLNKD 211
RD Y+ N + + + ++
Sbjct: 175 RDTYSGNGILVATVTEE 191
>gi|146414175|ref|XP_001483058.1| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P+ NGG VA+ G D A DTR+ + L+ ++ K+ ++ + +G DV
Sbjct: 4 PFSINGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFLGLTGLATDVIT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 129
L++ ++ +Y+ + ++M + L+S +LY +RF PY+ ++ GL G+ +
Sbjct: 64 LREDFRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLGKGGQPFICG 123
Query: 130 YDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+D +G + + G+ S + ++ L P+ L +D +S+A
Sbjct: 124 FDLIGCIDFAKDFIVSGTASDQLYGTCES-LYEPN---LEPEDLFETISQA--------- 170
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + V+ K+ + R + R+D
Sbjct: 171 LLNAVDRDALSGWGAVVYVVTKEKVVRRVLRTRQD 205
>gi|118345684|ref|XP_976672.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89288089|gb|EAR86077.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 289
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G + + IA + A+DT +S G ++ K+ D C ASSG +D + L +L+
Sbjct: 74 GSSVIGIAFNGGVIIASDTSISYGGMSRYNHIQRVHKITDNCAFASSGEFSDFQELSRLI 133
Query: 75 -AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYD 131
+ Y + + G +S Y+ R P Y +NV+GG+DN GK + D
Sbjct: 134 DEMTNQTYLNDDKINYTPRDYGNYISQLQYHHRNKMNPLYLWNVIGGVDN-GKPYLAHID 192
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G+Y + S G G+ L P + ++ +SE EA LV TCF +
Sbjct: 193 LYGTYIETNHVSTGFGNYLCGPLFEKGWRAD-------------MSEQEAKQLVNTCFQA 239
Query: 192 ATERDIYTANKLEIVVLNKDGIHRE 216
RD +++ V++K+G+ E
Sbjct: 240 LFYRDARAHETIQVTVIDKNGVRIE 264
>gi|340923906|gb|EGS18809.1| hypothetical protein CTHT_0054190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 206
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G + A D R+ +S ++ KI + D + +G DV+
Sbjct: 3 SPFSINGGACVAMVGKNCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVQ 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ + + +Y+ + + ++ L+S++LY +RF P++ V+ GLD G+ +
Sbjct: 63 TVADIFRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGEPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ + + ++ L P L E + +
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTATEQLFGMCES-LWEPD------------LGPEELFETIS 169
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 170 QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
Length = 210
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 15/195 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + I DY + D+R + G I +++ K+ K+ M +G D + L + +
Sbjct: 7 GTTTLGITAGDYVIMGTDSRATMGNFISNKNAQKLYKIDTYAGMTIAGLVGDAQVLVRYM 66
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ Q M A LLSN L +++PY ++GG D K +++ DA G
Sbjct: 67 RAEMELYRVQRKINMPIEAAATLLSNMLNQSKYYPYMVQLLVGGFDK--KPHIFSIDAAG 124
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y+S GSGS + L+ + + L +A++L + A +
Sbjct: 125 GSVEDEYASTGSGSPFVYGVLEAEYQPNMKL-------------DDAINLAIKAISVAKQ 171
Query: 195 RDIYTANKLEIVVLN 209
RD + N L+I V++
Sbjct: 172 RDSASGNMLQIGVID 186
>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG8G15]
Length = 210
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V I +D V AD R S GY I + + KI K+ D + +G AD + L +
Sbjct: 11 HGTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGLTLAGGVADAQNLTDI 70
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L I+ Q N+ + ++ +L S + R +P+ + +LGG D +G ++ D
Sbjct: 71 LRYHANIHAVQKNENIPIRSLARLCSLVFHQNRGYPFIADILLGGYDQDGP-QLFNIDMF 129
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E+ Y + GSGS + L+++ + D +T L +A+ + L +A
Sbjct: 130 GSVEKKSYVTTGSGSPVAYGVLEDEYR----------DDLT-LEDAKGIAL--RAVKAAI 176
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRK 222
R+I T + + I ++K+G E +K
Sbjct: 177 VRNIGTGDGINIAAIDKNGFQLLTKEQKK 205
>gi|346469773|gb|AEO34731.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ +I ++ DK + SG D
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVNLQTIATDFKRIFRIHDKLYVGLSGLATDAL 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L RH +YQ + + M ++S LY KRF PY+ V+ GL + +
Sbjct: 62 TLYQRLVFRHKLYQLREERDMKPETFASVVSAILYEKRFGPYFCQPVIAGLGEDDVPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 209
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 14/196 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A +TR + G I + KI K+ D +G +D ++L K +
Sbjct: 9 GTTTVGLTCKDGVVFATETRATMGNLIAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKYI 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +++ ++ K+++ A L SN L+ R +P+Y +LGG+D++G +Y+ D G
Sbjct: 69 RAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGVDDKGP-ALYSLDPTG 127
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
+ S GSGS + L+++ ++D L E +D+ SA E
Sbjct: 128 GVIKDLMISTGSGSPVAYGVLEDRY---------SED----LYVEEGIDVAIRAIKSAME 174
Query: 195 RDIYTANKLEIVVLNK 210
RD Y+ N + + + +
Sbjct: 175 RDAYSGNSILVATITE 190
>gi|212537589|ref|XP_002148950.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068692|gb|EEA22783.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 171
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+D NGG CVA+ G D A D R+ +S ++ KI A + +G DV
Sbjct: 3 SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVT 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
+ L + +Y+ + + +S + L+S++LY +RF PY+ V+ G+++ GK +
Sbjct: 63 TVSDLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFI 122
Query: 128 YTYDAVG 134
+D++G
Sbjct: 123 CGFDSIG 129
>gi|380481881|emb|CCF41580.1| proteasome component PUP3 [Colletotrichum higginsianum]
Length = 205
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + D + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVT 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ L+S++LY +RF PY+ V+ GLD GK +
Sbjct: 62 TVGDLFRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + ++ L P L E + +
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCES-LWEPD------------LGPDELFETIS 168
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 169 QSLLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
gi|121694316|sp|A0B5B1.1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosaeta thermophila
PT]
Length = 207
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I V A+++R + G I SR KI ++ D + ++G D +AL ++
Sbjct: 6 KGTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQIDDLVGLTTAGVVGDAQALVRM 65
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ A +Y+ Q + ++ A+ LLSN L +R+FP+ V+GG+D G +++ DA+
Sbjct: 66 IQAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGVDKMGPK-IFSLDAL 124
Query: 134 GS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G E S GSGS + L++ L P L QD L +A
Sbjct: 125 GGQIEEHDIVSTGSGSPIAYGVLES-LYKPG---LSIQDGSV---------LCVRAVHTA 171
Query: 193 TERDIYTANKLEIVVLNKD 211
+RD + N + +V + KD
Sbjct: 172 MKRDSASGNGIALVRITKD 190
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I + V A D R S GY + S+D K+ ++ + +G + ++L L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ L+ N L F Y +LGG+D G +Y+ D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ + + LS EA + SA E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLEQEFED-------------GLSIEEAKGVATKAIRSAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI 213
RD+ + N + I V+ +DG+
Sbjct: 213 RDLASGNGINIAVVTEDGV 231
>gi|398394287|ref|XP_003850602.1| proteasome core particle subunit beta 3 [Zymoseptoria tritici
IPO323]
gi|339470481|gb|EGP85578.1| hypothetical protein MYCGRDRAFT_105064 [Zymoseptoria tritici
IPO323]
Length = 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + +G DV
Sbjct: 3 SPFAINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGSSVYLGLTGLATDVS 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
++ +L + +Y+ + + +S L+S++LY +RF P++ V+ G+D GK +
Sbjct: 63 SVSELFRYKVNMYRLREERDISPKTFSNLVSSSLYERRFGPWFVSPVVAGIDGTSGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + + P L P +D +S+A
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWE---PDLGP-EDLFETISQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 --LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|301110580|ref|XP_002904370.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
gi|262096496|gb|EEY54548.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
Length = 204
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NG +A+AG D A DTR+ ++ D+ K+ ++ DK + +G DV+++ +L
Sbjct: 7 NGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDVQSVSQL 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L + +Y+ + + + LLSN +Y KRF P++ V+ GL + K + + D +
Sbjct: 67 LKFKINMYKMNEERDIKPKTLSALLSNMMYEKRFGPWFVEPVIAGLTEDNKPFLSSMDCL 126
Query: 134 GSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G + G+ + ++ K + E + + + C SA
Sbjct: 127 GCEMMTKDFVVAGTMEEALYGMCESMYKP-------------DMEEEDLFETLSQCLLSA 173
Query: 193 TERDIYTANKLEIVVLNKDGIHREYMELRKD 223
RD + + ++ GI + ++ R+D
Sbjct: 174 CNRDALSGWGAVVHIITPKGITSKKLQSRQD 204
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I + V A D R S GY + S+D K+ ++ + +G + ++L L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ L+ N L F Y +LGG+D G +Y+ D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ + + LS EA + SA E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLEQEFED-------------GLSIEEAKGVATKAIRSAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI 213
RD+ + N + I V+ +DG+
Sbjct: 213 RDLASGNGINIAVVTEDGV 231
>gi|410672077|ref|YP_006924448.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
gi|409171205|gb|AFV25080.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
Length = 210
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I +D V A + R + G+ I S+ KI ++ D M ++G D + + ++
Sbjct: 8 KGTTTVGIVCSDGVVMATEQRATMGHLIASKTAKKIYQIDDFAAMTTAGSVGDAQQIVRI 67
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
++ +Y+ + + M+ + +LSN L +R++P ++GG D G +Y+ DA+
Sbjct: 68 ISVESKLYKMRRKESMTIKGLTTMLSNLLSGQRYYPLMVQLLVGGYDKHGP-ELYSIDAL 126
Query: 134 -GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G+ + + GSGS + L+++ K ++ E V+L +A
Sbjct: 127 GGNIDEKRVVATGSGSPIAYGVLEDRYKE-------------NMTTQEGVELAVRALHNA 173
Query: 193 TERDIYTANKLEIVVLNKDGIHREYME 219
+RD + + +++V++ KD R +E
Sbjct: 174 MKRDSASGDGIDVVIITKDQFTRLELE 200
>gi|116780859|gb|ABK21850.1| unknown [Picea sitchensis]
Length = 233
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 13 GTTIIGVTYNGGTVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAADSQVVSDYV 72
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N ++GG D G +Y
Sbjct: 73 --RYFL--HQHIIQLGQPATVKVTANLI---RLLSYNNKNTLETGLIVGGWDKYEGGSIY 125
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+ G+ ++ ++ GSGS+ + FLD K +S+ EA LV C
Sbjct: 126 SVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKD-------------GMSKEEAEALVVKC 172
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + VV+N +G+ R +
Sbjct: 173 VSLAIARDGASGGVVRTVVINSEGVTRNF 201
>gi|354548652|emb|CCE45389.1| hypothetical protein CPAR2_704030 [Candida parapsilosis]
Length = 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P+ NGG VA+ G D A+D R+ + +S ++ KI + DK MA +G DV
Sbjct: 4 PFSINGGAAVAMIGKDCVAIASDLRLGSQSLGVSNNFEKIFEFGDKTYMALTGLATDVIT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCVY 128
L +L + +Y+ + + + + L+S++LY +RF P++ ++ GL + + K +
Sbjct: 64 LHELFKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFVGPIVAGLSSKDNKPFIC 123
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D++G + + G+ + + + L P+ L +D +S+A
Sbjct: 124 GFDSIGCIDFSHDFIVSGTATDQLYGMCEG-LYEPN---LEPEDLFETISQA-------- 171
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 -LLNAVDRDALSGWGAVVYIITKDKVVKRVLKTRQD 206
>gi|384249780|gb|EIE23261.1| proteasome subunit [Coccomyxa subellipsoidea C-169]
Length = 227
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
+ G T VA++ V AD+R+STG + +R KI L+D M SG AD +A+
Sbjct: 11 HTGTTIVAVSFDGGVVLGADSRVSTGNYVSNRASDKITSLSDNAYMLRSGSAADTQAIAD 70
Query: 73 LLAARHLIYQH--QHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
+ RH H + + ++ +L++ Y + + ++GG D EG G ++
Sbjct: 71 YV--RHYTAMHSMELGRDPKIKSVAKLVAQINYSNKNLLMGAM-IVGGWDPEGGGQIFGV 127
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
G+ + +++ GSGST I +LD+ + +S EA +LVKT A
Sbjct: 128 PISGTLVQQDWTTDGSGSTYIWGYLDSAYRD-------------GMSREEAEELVKTALA 174
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYME 219
A RD + ++ + K G R ++
Sbjct: 175 LAMSRDGSSGGLARLITITKAGAERRMIK 203
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I V AAD R G I + KI ++ D + ++G AD + +
Sbjct: 8 TKGTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVD 67
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLY--YKRFFPYYSFNVLGGLDNEGKGCVYTY 130
L+ A +Y+ +HN+ +S A+ ++S+ L+ K F PY ++GG N+ +Y
Sbjct: 68 LMRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGF-NDDDPALYNL 126
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
D GS Y++ GSGS L+ + + +S +A+++
Sbjct: 127 DPSGSIIEEDYTATGSGSPTAYGVLEAEYEE-------------GMSLDDAIEVAVRAVK 173
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYME 219
SA ERD T + +V + ++ +RE E
Sbjct: 174 SALERDTGTGEGVTVVTITREEGYRELPE 202
>gi|387593397|gb|EIJ88421.1| hypothetical protein NEQG_01111 [Nematocida parisii ERTm3]
gi|387597054|gb|EIJ94674.1| hypothetical protein NEPG_00197 [Nematocida parisii ERTm1]
Length = 204
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
GG+ +A+ G D V AD R S L +++++ K+ D+ +++ +GF D + L K L
Sbjct: 8 GGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRLYKMTDRLILSLTGFVPDCQILYKTL 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+++ +++ LLS LY KRF P+ ++ G D E VYT D +G
Sbjct: 68 RKHVNMFKLNEQREIEPKEFACLLSYILYSKRFSPFLISPLIVGFDRENNPHVYTMDLIG 127
Query: 135 SYE-RVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
++S G+ ST + D L +D T +A F +A
Sbjct: 128 CMSAHKDFASTGTASTNLTGIADVLFTEG----LEEEDLFTTAVQA---------FLNAI 174
Query: 194 ERDIYTANKLEIVVLN-KDGIHREYMELRKD 223
+R+ + ++++L +HRE ++ R+D
Sbjct: 175 DRNALSGWGSDVIILTPSKRVHRE-VKTRQD 204
>gi|146305014|ref|YP_001192330.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595851|sp|A4YJ04.1|PSB2_METS5 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145703264|gb|ABP96406.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 196
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V I D + A R+S G +LS+ K+ ++ + + +G D++AL +++ A
Sbjct: 7 TAVGIRLQDGVILGAVRRLSYGGYVLSKSAKKVFPIS-RFGIGGAGLFGDLQALTRIMNA 65
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
Y+ +N+ +S A +LLS LY ++ P+ S + GG+DN G+ +Y D +GS
Sbjct: 66 NIKYYELYNNRPISTRAAAKLLSIILYQYKYMPFISEVLFGGVDN-GEPQLYVLDPLGSL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
Y++ GSG+ + + L+ + L+ + +L ++ ERD
Sbjct: 125 LDDIYAAVGSGARVAIGVLEAEYSE-------------KLTLTQGRELTIKSLRASAERD 171
Query: 197 IYTANKLEIVVLNKDG-IHREYM 218
+ + + ++I+ ++KDG I+ E++
Sbjct: 172 VTSGDGIDILTISKDGKINTEFL 194
>gi|359415410|ref|ZP_09207873.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
gi|358034267|gb|EHK02709.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
Length = 215
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 16/189 (8%)
Query: 25 DYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ 84
D V AAD R S G+ S+ KI +L + + +G D + + +++ ++ +++ +
Sbjct: 28 DGVVLAADRRASMGHLTASKYAQKIYRLDENLGLTIAGSVGDAQRIVRMMRSQLKLHKLE 87
Query: 85 HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD-AVGSYERVGYSS 143
K++S G LLSN L+ + PY + +LGGL++ G G ++ D A G E +++
Sbjct: 88 -TKELSVRGAGTLLSNILHSSKMMPYMNQFILGGLED-GNGKLFDLDPAGGLMEHNYFTA 145
Query: 144 QGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKL 203
GSGS + L++ + + +E ++L K SA ERD + N +
Sbjct: 146 TGSGSQMAYGVLEDHYEE-------------DMGHSEGLELAKKAIKSAMERDTASGNGI 192
Query: 204 EIVVLNKDG 212
+V + +DG
Sbjct: 193 MVVEITEDG 201
>gi|389626557|ref|XP_003710932.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
gi|351650461|gb|EHA58320.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
Length = 206
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYSSSVFLGLTGLATDVA 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ L+S++LY +RF PY+ V+ GL+ G +
Sbjct: 63 TVSDLFRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLEPKTGAPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + ++ + P L P +D +S+A
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASEQLFGMCESLWE---PDLGP-EDLFETISQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA +RD + + ++ KD + + ++ R+D
Sbjct: 172 --LLSAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|326509597|dbj|BAJ87014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ K + SG +D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYIGLSGLASDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L +H +YQ + + M L+S+ LY KRF PY+ ++ GL + + +
Sbjct: 62 TLYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|313126409|ref|YP_004036679.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|448286253|ref|ZP_21477487.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
gi|445575086|gb|ELY29568.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
Length = 243
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A D R S G+ + S++ K+ ++ + +G + ++L + +
Sbjct: 49 GTTTVGLKTEDGVVLATDMRASLGHMVSSKNVQKVEEIHPTGALTIAGSVSAAQSLIRSI 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ LL N L F Y +LGG D+EG +Y+ D G
Sbjct: 109 RAEVRLYESRRGEDMSMQALSTLLGNFLRSGAF--YIVQPILGGFDDEG-AHIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ Q+ LS EA SA E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLE-------------QEYSNDLSIEEAKTTAARAIKSAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI----HREYMEL 220
RD+ + N + + V+ +DG+ H+++ ++
Sbjct: 213 RDLASGNGINVCVVTEDGVEITQHKDFEDV 242
>gi|407921624|gb|EKG14765.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 205
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI D + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYGD-VYLGLTGLATDVS 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + +S M L+S++LY +RF PY+ V+ G++ GK +
Sbjct: 62 TVADLFRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFVSPVIAGINQTTGKPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S D + L P L + + V
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTAS-------DQLFGTCEGLWEP------DLGPEDLFETVS 168
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 169 QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 217
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A D R + G I ++ K+ K+ D M +G D ++L +++
Sbjct: 14 GTTTVGIVCNDGIVLATDKRATMGNLIADKEAKKLYKIDDYMAMTIAGSVGDAQSLVRII 73
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A +Y+ + + + LLSN L+ R FP+ ++GG D +++ DAVG
Sbjct: 74 SAEANLYKLRTGNNIPPHSCAMLLSNVLHGSRHFPFLIQLIIGGYDTIHGAKLFSLDAVG 133
Query: 135 SY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E +++ GSGS L+ + K + A+ L+ +A
Sbjct: 134 GLNEETSFTATGSGSPTAFGVLEEEYKKDMTINKGKLLAIKSLT-------------AAM 180
Query: 194 ERDIYTANKLEIVVLNKDGI 213
+RD ++ N + + V++K+G+
Sbjct: 181 KRDAFSGNGISLAVIDKNGV 200
>gi|345567463|gb|EGX50395.1| hypothetical protein AOL_s00076g159 [Arthrobotrys oligospora ATCC
24927]
Length = 205
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
+P+ NGG C+A+AG D A D R+ LS ++ KI D + +G DV+
Sbjct: 3 NPFTLNGGACLAMAGKDCVAIACDLRLGQQALTLSNNFPKIFNYGD-VFLGLTGLATDVQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCV 127
+ L + +Y+ + +++ M L+S++LY +RF PY+ V+ G++ GK +
Sbjct: 62 TMHSLFRYKVNLYRLREEREIEPETMANLVSSSLYERRFGPYFVSPVVAGINQRTGKPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S D L P L + + V
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTAS-------DQLFGVAEGLWEP------DLEPEDLFETVS 168
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
++ +RD + ++ KD + + + R+D
Sbjct: 169 QTLLNSLDRDALAGWGAHVYIITKDKVTKRLLRTRQD 205
>gi|391339684|ref|XP_003744177.1| PREDICTED: proteasome subunit beta type-3-like [Metaseiulus
occidentalis]
Length = 205
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G A D R+ +S D+ ++ ++ + + G D + +
Sbjct: 7 NGGIVIAMKGDGCVAIATDRRLGVEGRTVSIDFERVFEMGPRLFVGLPGLATDTITVSQK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCVYTYDA 132
L +Y+ Q N+QM+ LLS TLY KRF PY+ V+ G+D + V D
Sbjct: 67 LRFDMNLYELQENRQMTPKTFATLLSGTLYEKRFGPYFIEPVVAGMDPKTNEPYVACMDL 126
Query: 133 VGS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+GS E V + G+ + L P + E + + C +
Sbjct: 127 IGSTTETVDFVVSGTAE-------EEAYGMCETLWRPG------MKPDELFECISQCVLN 173
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + +++ V+ KD + Y++ R D
Sbjct: 174 AMDRDAISGWGVKVHVMEKDKVTTRYLKTRMD 205
>gi|320590790|gb|EFX03233.1| proteasome component [Grosmannia clavigera kw1407]
Length = 206
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ K+ + D + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKVFQYGDNVFLGLTGLATDVN 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ L+S++LY +RF P++ V+ GL+ G+ +
Sbjct: 63 TVSDLFRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLEPKTGQPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + ++ + P L P DA+ + +
Sbjct: 123 CGFDSIGCIDFARDFIVSGTASEQLFGMCESLWE---PDLGP--DAL--------FETIS 169
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 170 QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|358391261|gb|EHK40665.1| beta subunit Pup3 of the 20S proteasome [Trichoderma atroviride IMI
206040]
Length = 205
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + D + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQYGD-VFLGLTGLATDVS 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ L+S++LY +RF PY+ V+ GLD GK +
Sbjct: 62 TVSDLFRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + + P L P DA+ + +
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCEGLWE---PDLEP--DAL--------FETIS 168
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 169 QALLTAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|294948700|ref|XP_002785851.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239899959|gb|EER17647.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 202
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
NGG+ +A+ G A D R +S + K+ + +C++ G D + L +
Sbjct: 4 NGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDSQTLSQ 63
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
LL R +Y+ + +++M C + L++ LY KRF PY+ V+ GL N+G+ + ++D
Sbjct: 64 LLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFISSFDL 123
Query: 133 VGS 135
+G+
Sbjct: 124 IGT 126
>gi|50290063|ref|XP_447463.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526773|emb|CAG60400.1| unnamed protein product [Candida glabrata]
Length = 205
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+AG D A D R+ +S ++ K+ +G DV
Sbjct: 4 PSSINGGIVVAMAGKDCVAIACDLRLGNQSLGVSNNFEKVFNYG-HVFFGITGLATDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L +L + +Y+ + ++ + QL+S+TLY +RF PY+ V+ G++++ GK +
Sbjct: 63 LNELFRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIA 122
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L A+D +S+A
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEAEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + Y+++R+D
Sbjct: 171 -LLNAADRDALSGWGAVVYIIKKDKVVKRYLKMRQD 205
>gi|332796484|ref|YP_004457984.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332694219|gb|AEE93686.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 196
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V I D + AA+ R+S G +LS+ +K + + + +A +G D++AL +++ A
Sbjct: 7 TAVGIKLNDGVILAAERRLSYGGYVLSKS-AKKVHIIGRFGIAGAGLFGDLQALTRIMNA 65
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
Y+ + K +S A +LLS LY ++ P+ S + G+DN G +Y D +GS
Sbjct: 66 EIKYYELYNEKPISTKAAAKLLSIILYQYKYMPFISEILFAGVDN-GIPQLYVLDPLGSL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
Y++ GSG+ + + L+ + D PL + + + +K+ AS ERD
Sbjct: 125 LDDVYAAVGSGARVAIGVLEAE-----------YDQNMPLDKGKEIA-IKSIKAS-IERD 171
Query: 197 IYTANKLEIVVLNKDG-IHREYM 218
+ + + ++I++L+K G + EY+
Sbjct: 172 VTSGDGIDILILDKTGKTYTEYI 194
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V I D V AD R S GY I + + KI K+ D + +G AD + + +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDI 70
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L +++ + + +S ++ +L S + R +P+ + ++GG D EG ++ D
Sbjct: 71 LRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDAEGP-ALFNIDMF 129
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E+ Y + GSGS + L+ + + L+ EA + +A
Sbjct: 130 GSVEKKAYVTTGSGSPVAYGLLEEEYRE-------------DLTVEEAKKIALRAVKAAI 176
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRK 222
R+I T + + I +++KDG E +K
Sbjct: 177 VRNIGTGDGINIAIMDKDGFRLLTEEQKK 205
>gi|357138383|ref|XP_003570772.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ +K + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKVHEKLYIGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L +H +YQ + + M L+S LY KRF PY+ ++ GL + + +
Sbjct: 62 TLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGDNDQPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
gi|74567841|sp|Q6L181.1|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
Length = 210
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I DY + D+R + I +++ K+ ++ + M +G D + L + +
Sbjct: 7 GTTTVGITAGDYVIMGTDSRATMENFISNKNAQKLYQIDNYAAMTIAGLVGDAQVLVRYM 66
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ Q M A LLSN L +F+PY ++GG D K +++ DA G
Sbjct: 67 KAEMELYRVQRKVSMPIDAAATLLSNMLNQTKFYPYMVQLLVGGYDT--KPHIFSIDAAG 124
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y+S GSGS + L+ + + +S + ++LV ++A +
Sbjct: 125 GSVEDIYASTGSGSPFVYGVLEAEYQK-------------NMSLDDGINLVIKAISAAKQ 171
Query: 195 RDIYTANKLEIVVLN 209
RD + N L++ V++
Sbjct: 172 RDSASGNMLQLGVVD 186
>gi|357123202|ref|XP_003563301.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ K + SG D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYLGLSGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L +H +YQ + + M L+S LY KRF PY+ ++ GL + + +
Sbjct: 62 TLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGEDNEPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A++ R S G + + KI K+ D V +G D + L K++
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +YQ ++N ++S A + +N L R P Y +LGG+D + K +Y+ D G
Sbjct: 68 EAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMDGD-KPSLYSLDPAG 123
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y S GSGS + L+++ ++ E +++ +A+E
Sbjct: 124 GMIEDTYISTGSGSIVAYGVLEDRYHEE-------------ITTDEGLEIAVRAIKAASE 170
Query: 195 RDIYTANKLEIVVLNKDG 212
RD ++ N + + KDG
Sbjct: 171 RDTFSGNGYLVAKVTKDG 188
>gi|358378900|gb|EHK16581.1| hypothetical protein TRIVIDRAFT_183933 [Trichoderma virens Gv29-8]
Length = 205
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + D + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQYGD-VFLGLTGLATDVS 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ L+S++LY +RF PY+ V+ GLD GK +
Sbjct: 62 TVSDLFRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + + P L P DA+ + +
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCEGLWE---PDLEP--DAL--------FETIS 168
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 169 QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
gi|302595749|sp|A4FYA5.1|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanococcus maripaludis
C5]
Length = 219
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A D R + G I ++ K+ K+ D M +G D ++L +++
Sbjct: 14 GTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRII 73
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A I++ + M+ + L+SN L+ R +P + +LGG D +++ D VG
Sbjct: 74 SAEAKIHKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSLDPVG 133
Query: 135 SY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E +++ GSGS L+ + +S + AV LS SA
Sbjct: 134 GINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALS-------------SAM 180
Query: 194 ERDIYTANKLEIVVLNKDGI 213
+RD Y+ N + + +NKDG+
Sbjct: 181 QRDAYSGNGISLAHINKDGV 200
>gi|428162279|gb|EKX31444.1| proteasome subunit beta type 3 [Guillardia theta CCMP2712]
Length = 208
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG + +AG + A D R Y L+ D +K+ K+ D+ + +G D + +
Sbjct: 7 NGGCVIGMAGKNCVAIACDKRYGAQYQTLATDKTKVYKMHDQLFIGLAGLATDQQTFYER 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L R +Y + + + + G+++S LY KRF PY+ V+ GLD E K +++ D +
Sbjct: 67 LKFRLAMYSLREERLIKPASFGKMVSTLLYEKRFGPYFIEPVIAGLDKENKPYLFSSDFI 126
Query: 134 GS-----YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
G+ + G+ G+ + +M ++ + L E + V C
Sbjct: 127 GAPLLPDMDTNGFVVAGTCTEQLMGMCESMWRK-------------DLEPEELFETVSQC 173
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+ +RD + + ++ D + + R D
Sbjct: 174 LLAGQDRDCLSGWGAVVHIICPDRVITRTLRGRMD 208
>gi|348667371|gb|EGZ07196.1| hypothetical protein PHYSODRAFT_288866 [Phytophthora sojae]
Length = 204
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NG +A+AG D A DTR+ ++ D+ K+ ++ DK + +G DV+++ +L
Sbjct: 7 NGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDVQSVSQL 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L + +Y+ +++ + LLS+ +Y KRF P++ V+ GL + K + + D +
Sbjct: 67 LKFKLNMYKMNEEREIKPKTLSALLSSMMYEKRFGPWFVEPVIAGLTEDNKPFLSSMDCL 126
Query: 134 GSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G + G+ + ++ K + E + + + C SA
Sbjct: 127 GCEMMTKDFVVAGTMEEALYGMCESMYKP-------------DMEEEDLFETLSQCLLSA 173
Query: 193 TERDIYTANKLEIVVLNKDGIHREYMELRKD 223
RD + + ++ GI + ++ R+D
Sbjct: 174 CNRDALSGWGAVVHIITPKGITSKKLQSRQD 204
>gi|302925511|ref|XP_003054110.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735051|gb|EEU48397.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 205
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ KI + D + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVN 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ L+S++LY +RF PY+ V+ GLD GK +
Sbjct: 62 TVSDLFRYKTNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV-DLV 185
+D++G + + G+ S + + + P E +A+ + +
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCEGLWE--------------PDMEPDALFETI 167
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 168 SQSLLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|392562504|gb|EIW55684.1| N-terminal nucleophile aminohydrolase [Trametes versicolor
FP-101664 SS1]
Length = 208
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+ +A+ G + A+D R+ +S ++ KI ++D+ + G DV L+++
Sbjct: 7 NGGSVIAMVGKECVAIASDLRLGNQALGISSNFQKIFPMSDRIYLGLPGLATDVTTLKEV 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC----VYT 129
R +Y + +++ L+S+TLY KRF PY+ V+ GL+ G +
Sbjct: 67 FRYRVNMYTIKEEREIEPETFAHLVSSTLYEKRFGPYFIEPVMAGLEKTPSGAYKPFIAA 126
Query: 130 YDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
D +G + G+ ST L A+ P E E DL +TC
Sbjct: 127 TDLIGCLNFAKDFVVAGTAST--------------KLYGVAEGLWEPDLEPE--DLFETC 170
Query: 189 ---FASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD Y+ E+ ++ KD + + ++ R D
Sbjct: 171 AQTLLNAVDRDAYSGWGAEVHLITKDKVIKRTLKGRMD 208
>gi|451992642|gb|EMD85122.1| hypothetical protein COCHEDRAFT_1149474 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ +GG CVA+ G D A D R+ +S ++ KI + D + +G DV
Sbjct: 3 SPFSIDGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVS 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + +S M L+S++LY +RF PY+ V+ G++ GK +
Sbjct: 62 TVSDLFRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S D + L P L + + +
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTAS-------DQLFGTCEGLWEP------DLGPEDLFETIS 168
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 169 QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|330835873|ref|YP_004410601.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329568012|gb|AEB96117.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 196
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V + D + A R+S G +LS+ K+ +A + + +G D++AL +++ A
Sbjct: 7 TAVGVKVQDGIILGAVRRLSYGGYVLSKSAKKVFPIA-RFGIGGAGLFGDLQALTRIMNA 65
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
Y+ +N+ +S A +LLS LY ++ P+ S + GG+D +G+ +Y D +GS
Sbjct: 66 NIKYYELYNNRPISTKAAAKLLSIILYQYKYMPFISEVLFGGVD-DGQPQLYVLDPLGSL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
Y++ GSG+ + + L+ + L+ + +L ++ ERD
Sbjct: 125 LDDVYAAVGSGARVSIGVLEAEYNESMTLM-------------QGKELTIKSLRASAERD 171
Query: 197 IYTANKLEIVVLNKDG-IHREYM 218
+ + + ++I+ +++DG I+ E++
Sbjct: 172 VTSGDGIDILTISRDGKINTEFL 194
>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595852|sp|A4YIE0.1|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 217
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D + AAD R S G+ + ++ KI+ + D+ M ++G AD++ + +
Sbjct: 21 GTTTVGLVVKDAVILAADRRASAGFFVANKMVRKIVYIDDRIGMTTAGSVADLQFIYNYM 80
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+ N+ ++ ++ L+N L ++FPY ++GG D + + ++ D +G
Sbjct: 81 KNIYHYNLISGNRPVTVKSLATYLTNILSQNKYFPYLVQILMGGYDTQPR--LFNLDYLG 138
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASAT 193
Y + GSGS + M L +D +P L+ +A+DL SA
Sbjct: 139 DMTEETYVATGSGSPVAMGVL--------------EDGYSPDLTGDQAMDLAARAVMSAI 184
Query: 194 ERDIYTANKLEIVVLNKDG-IHREYMELRKD 223
+RD +T + + + K+G + RE RK+
Sbjct: 185 KRDSFTGTGVIVTKITKEGHVEREIYPNRKE 215
>gi|320101460|ref|YP_004177052.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753812|gb|ADV65570.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 208
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V + DY V AAD R + G + + KI ++ D + SG AD + + + A
Sbjct: 9 TTVGLVVGDYVVLAADKRATAGPMVYHKAVKKISRITDYAALTISGLVADAQYIVEY--A 66
Query: 77 RHLI--YQHQHNKQMSCPAMGQLLSNTL-YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
R L Y+ + K +S A+ +S L Y R+ P+ +LGG D+ G +Y D
Sbjct: 67 RFLARDYEAETGKPISVGALASRISLVLSVYLRYVPFIVQLLLGGRDHTG-ASLYYMDLY 125
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS R Y + GSGS + L+ +S LS EA L +SA
Sbjct: 126 GSVTREKYMATGSGSPVAFGVLEQGYRS-------------DLSLEEAKALAFKAVSSAI 172
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRK 222
RD +T +++VV+ G E + L++
Sbjct: 173 MRDGFTGEGVDVVVIGPQGYMEETIPLKR 201
>gi|336477060|ref|YP_004616201.1| proteasome endopeptidase complex subunit beta [Methanosalsum
zhilinae DSM 4017]
gi|335930441|gb|AEH60982.1| proteasome endopeptidase complex, beta subunit [Methanosalsum
zhilinae DSM 4017]
Length = 210
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V A + R + G I S+ KI ++ D + ++G D + + +L+
Sbjct: 9 GTTTVGIVCRDGVVLATEKRATMGNLIASKTAKKIYQIDDLVGLTTAGSVGDAQQIVRLI 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+ +Y+ + + M+ + LLSN L +R++P ++GG+D +G +Y+ DA+G
Sbjct: 69 SVESRLYKMRRQETMTIKGITTLLSNLLSGQRYYPLMVQLLIGGVDKKGPN-LYSLDALG 127
Query: 135 S-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E + GSGS + L+++ T +S E DL +A
Sbjct: 128 GMIEETNAVATGSGSPIAYGVLEDRYH-------------TDMSIEEGADLAIRALHNAM 174
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+RD + N +++V + + YM + +D
Sbjct: 175 KRDSASGNGIDVVCITDE----NYMHMEED 200
>gi|449295365|gb|EMC91387.1| hypothetical protein BAUCODRAFT_39558 [Baudoinia compniacensis UAMH
10762]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G + A D R+ +S ++ KI + + + +G DV
Sbjct: 3 SPFSINGGACVAMRGKNCVAIACDLRLGLQSLTVSNNFPKIFQYSPTAFLGLTGLATDVS 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCV 127
+ +L + +Y+ + + ++ QL+S++LY +RF P++ V+ G+D + G +
Sbjct: 63 TVSELFRYKVNMYRLREERDIAPKTFAQLVSSSLYERRFGPWFVSPVVAGIDGKSGAPFI 122
Query: 128 YTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S D + L P L + + +
Sbjct: 123 CGFDSIGCIDYAADFIVSGTAS-------DQLFGTCEGLWEP------DLEPDDLFETIS 169
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 170 QALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|15790018|ref|NP_279842.1| proteasome subunit alpha [Halobacterium sp. NRC-1]
gi|10580444|gb|AAG19322.1| proteasome, subunit alpha [Halobacterium sp. NRC-1]
Length = 255
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 12 DNNGGTCVAIAGADYCVTAADTRMSTGYSILS-RDYSKIIKLADKCVMASSGFQADVKAL 70
+ G T V + D + A+D R S G ++S ++ K+ ++ ++ SG ++
Sbjct: 57 NKTGTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSF 116
Query: 71 QKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 130
+ L A +Y+ + + MS A+ + SN L FF +LGG+D++G G V++
Sbjct: 117 IRSLRAEANLYEARRGEYMSIDALSTMASNLLRGGPFFRVVP--ILGGVDDDG-GHVFSL 173
Query: 131 DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
D GS Y++QGSG MP+ L+ Q+ L+ A+A +
Sbjct: 174 DPAGSSMSDTYTAQGSG----MPYALGVLE---------QEYSEDLTMADAEQVAAHAVK 220
Query: 191 SATERDIYTANKLEIVVLNKDGI----HREY 217
SA+ERD + N + I + DG+ H+E+
Sbjct: 221 SASERDTASGNGIHITKITHDGLTTVGHKEF 251
>gi|13541494|ref|NP_111182.1| proteasome protease subunit beta [Thermoplasma volcanium GSS1]
gi|74575802|sp|Q97AZ7.1|PSB_THEVO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|14324878|dbj|BAB59804.1| proteasome beta subunit [Thermoplasma volcanium GSS1]
gi|239061209|emb|CAZ48528.1| 20S proteasome beta subunit [Thermoplasma volcanium GSS1]
Length = 211
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I D + A + R++ I+ ++ K+ ++ M +G D + L +
Sbjct: 6 ETGTTTVGITLTDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVR 65
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+ A +Y+ Q M A+ LLSN L ++ PY ++GG+D V++ DA
Sbjct: 66 YMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTSPH--VFSIDA 123
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G Y+S GSGS + L++Q LS E VDLV ++A
Sbjct: 124 AGGSVEDIYASTGSGSPFVYGVLESQYNE-------------KLSIDEGVDLVIRAISAA 170
Query: 193 TERDIYTANKLEI-VVLNKDG 212
+RD + +++ V+ KDG
Sbjct: 171 KQRDSASGGMIDVAVITKKDG 191
>gi|84997075|ref|XP_953259.1| proteasome beta 3 subunit [Theileria annulata strain Ankara]
gi|65304255|emb|CAI76634.1| proteasome beta 3 subunit, putative [Theileria annulata]
Length = 220
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSI-LSRDYSKIIKLADKCVMASSGFQADVKALQK 72
NGG VA+ G A D R+ + +S ++ K K+ + C A+SG DV+ L+
Sbjct: 22 NGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQTLKD 81
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+ + +Y+ + +K+MS + ++ + LY +RF P++ +V+ GLD + + +D
Sbjct: 82 EIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSSPYITCFDL 141
Query: 133 VGS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
VG+ + G+ S + + K P + P Q + V C +
Sbjct: 142 VGAPCTPTDFVVAGTCSEQLYGVCEALFK---PGMDPEQ----------LFETVSQCLMA 188
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+RD + E+ V+ D + ++ R D
Sbjct: 189 GIDRDCLSGWGAEVHVITPDRVISRSLKTRMD 220
>gi|269986877|gb|EEZ93154.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + D + AAD R + + + +++ K++ ++ + ++G AD++A+ +L+
Sbjct: 7 GTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMAISGSIGITTAGMVADLQAMVRLM 66
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF---FPYYSFNVLGGLDNEGKGCVYTYD 131
+ +Y+ + ++ LLS L+ KR Y F ++GG D K +++ D
Sbjct: 67 RSELTLYEIRSGSKLDTDGAVSLLSAVLFNKRLSLNLIYGEF-IVGGYDTAPK--LFSID 123
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G + ++ GSG + L+ K +SE EAV L +S
Sbjct: 124 EAGGQGKDKFTVTGSGGVFALGVLEGDYKD-------------NMSEEEAVKLAYKAISS 170
Query: 192 ATERDIYTANKLEIVVLNKDG 212
+ RD+YT ++I V+NK G
Sbjct: 171 SIRRDVYTGEGIDIAVINKKG 191
>gi|115466298|ref|NP_001056748.1| Os06g0139900 [Oryza sativa Japonica Group]
gi|55296478|dbj|BAD68674.1| putative beta 1 subunit of 20S proteasome [Oryza sativa Japonica
Group]
gi|113594788|dbj|BAF18662.1| Os06g0139900 [Oryza sativa Japonica Group]
gi|125553981|gb|EAY99586.1| hypothetical protein OsI_21564 [Oryza sativa Indica Group]
gi|125595991|gb|EAZ35771.1| hypothetical protein OsJ_20062 [Oryza sativa Japonica Group]
gi|215679027|dbj|BAG96457.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + V AAD+R STG + +R KI +L D + SG AD + + + +
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISEYV 84
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N+L GG D G ++
Sbjct: 85 --RYFL--HQHTIQLGQPATVKVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIF 137
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+ G+ R ++ GSGS+ + LD++ K +S+ EA V
Sbjct: 138 SVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKE-------------GMSQEEAEKFVVKV 184
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N DG+ R++
Sbjct: 185 VSLAIARDGASGGVVRTVTINADGVSRKF 213
>gi|68488966|ref|XP_711676.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|77023006|ref|XP_888947.1| hypothetical protein CaO19_1336 [Candida albicans SC5314]
gi|46432996|gb|EAK92454.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|76573760|dbj|BAE44844.1| hypothetical protein [Candida albicans]
gi|238883475|gb|EEQ47113.1| proteasome component PUP3 [Candida albicans WO-1]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 104/216 (48%), Gaps = 15/216 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P+ NGG VA+ G D A+D R+ +S ++ KI + DK + +G DV +
Sbjct: 4 PFSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVIS 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCVY 128
L++L + +Y+ + + + + L+S++LY +RF P++ ++ GL + + K +
Sbjct: 64 LKELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFIC 123
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D++G + + G+ S + ++ L P+ L +D +S+A
Sbjct: 124 GFDSIGCIDFSHDFIVSGTASDQLYGMCES-LYEPN---LEPEDLFETISQA-------- 171
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 -LLNAVDRDALSGWGAVVYIVTKDKVIKRVLKTRQD 206
>gi|363756318|ref|XP_003648375.1| hypothetical protein Ecym_8276 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891575|gb|AET41558.1| Hypothetical protein Ecym_8276 [Eremothecium cymbalariae
DBVPG#7215]
Length = 215
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
N G + +A+ D + AD+R +TG I +R K+ ++ DK SG AD +A+
Sbjct: 17 NLGTSIMAVTYKDGVILGADSRTTTGTYIANRVTDKLTRVHDKIWCCRSGSAADTQAVAD 76
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
++ +Y Q+ + S L S Y + F ++ G D++ KG VYT
Sbjct: 77 IVQHHLDLYAAQYG-EPSVNTAASLFSTICYENKDFLTAGI-IVAGYDDKNKGEVYTIPL 134
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
GS + Y+ GSGST I + D K +S+ E + +K + A
Sbjct: 135 GGSVHKAPYAIAGSGSTFIYGYCDKNFKE-------------NMSKEETIRFMKHSLSQA 181
Query: 193 TERDIYTANKLEIVVLNKDGIHR 215
+ D + + +VVL K+G+ R
Sbjct: 182 IKWDGSSGGVIRMVVLTKEGVER 204
>gi|308493735|ref|XP_003109057.1| CRE-PBS-3 protein [Caenorhabditis remanei]
gi|308247614|gb|EFO91566.1| CRE-PBS-3 protein [Caenorhabditis remanei]
Length = 204
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 16/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
GGT VA+AG + A+D R+ + ++ D K+ K+ DK + +GFQ+D + + +
Sbjct: 7 TGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ R +Y+ + N+++ + +++SN Y RF Y++ ++ GLD+ K + D +
Sbjct: 67 IMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDSNKPYICCMDTI 126
Query: 134 G--SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G S R + + G+G ++ +N + + P + L EA A ++ S
Sbjct: 127 GCVSAPR-DFVAVGTGQEYLLGVCENFWREN---MKPDE-----LFEATAQSIL-----S 172
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ERD + + + KD ++ ++ R D
Sbjct: 173 CLERDAASGWGAVVYTITKDKVNVSTIKARMD 204
>gi|19113087|ref|NP_596295.1| 20S proteasome component beta 1 Pre3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380244|sp|O43063.1|PSB1_SCHPO RecName: Full=Probable proteasome subunit beta type-1; Flags:
Precursor
gi|2832891|emb|CAA16832.1| 20S proteasome component beta 1 Pre3 (predicted)
[Schizosaccharomyces pombe]
Length = 226
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 14/206 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T A+ D + AAD+R + G I +R K+ +L D SG AD + + LL
Sbjct: 24 GTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLL 83
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+Y+ Q S L S Y + ++ G D + G VY+ G
Sbjct: 84 KYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGL-IVAGYDEKTGGDVYSIPLGG 142
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S + + GSGS I F D + +++ EAV+ +K A A E
Sbjct: 143 SLHKQPLAIGGSGSAFIYGFCDANFREN-------------MTQEEAVEFLKNAVALAME 189
Query: 195 RDIYTANKLEIVVLNKDGIHREYMEL 220
RD + + +V+LNKDG+ R++ +
Sbjct: 190 RDGSSGGTIRMVILNKDGMERKFFAI 215
>gi|341897730|gb|EGT53665.1| hypothetical protein CAEBREN_01834 [Caenorhabditis brenneri]
Length = 204
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 16/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
GGT VA+AG + A+D R+ + ++ D K+ K+ DK + +GFQ+D + + +
Sbjct: 7 TGGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ R +Y+ + N+++ + +++SN Y RF Y++ ++ GLD+ K + D +
Sbjct: 67 IMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTI 126
Query: 134 G--SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G S R + + G+G ++ +N + + P + L EA A ++ S
Sbjct: 127 GCVSAPR-DFVAVGTGQEYLLGVCENFWREN---MKPEE-----LFEATAQSIL-----S 172
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ERD + + + KD ++ ++ R D
Sbjct: 173 CLERDAASGWGAVVYTITKDKVNVSTIKARMD 204
>gi|194744578|ref|XP_001954770.1| GF18436 [Drosophila ananassae]
gi|190627807|gb|EDV43331.1| GF18436 [Drosophila ananassae]
Length = 205
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG VA+ G D A D R +S D+ K+ +A + + +G Q D+ ++
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + N++M+ +LS+ LY RF PY+ V+ GLD K + D
Sbjct: 67 LMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPFICNMDL 126
Query: 133 VG-SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G E V + G+ + + + + P L P Q +++ +
Sbjct: 127 IGCPNEPVDFVVAGTCAEQLYGMCETLWR---PDLEPDQ----------LFEVIAQSMMN 173
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + ++ KD I ++ R D
Sbjct: 174 AFDRDAMSGWGATVYIIEKDKITERSLKTRMD 205
>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 202
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 16 GTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLA 75
GT + + + V A++ R++ +LS K+ + + +G DV L+++L
Sbjct: 6 GTAIGVKTREGVVLASEKRLTYDGFVLSSSVKKVYAITPHVGVGFAGLMGDVNILKRMLE 65
Query: 76 ARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
Y+ QH +++ + ++LS LY + P + V+GG D+ G +Y D VGS
Sbjct: 66 MEAKYYELQHGREIRVRGLAKMLSVILYSYKLAPMLTEIVVGGYDDNGP-QLYILDPVGS 124
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
Y++ GSG+ L + +++ P + L EAE LV + ER
Sbjct: 125 LIEEKYAALGSGAQLALGYIE-----------PRYNPDISLEEAE--KLVVEAVKTVIER 171
Query: 196 DIYTANKLEIVVLNKDG 212
D+ + + ++I+ + G
Sbjct: 172 DVLSGDGVDILKITAKG 188
>gi|290559800|gb|EFD93124.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + D + AAD R + + + +++ K++ ++ + ++G AD++A+ +L+
Sbjct: 7 GTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMSISSNIGVTTAGMVADLQAMVRLM 66
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF---FPYYSFNVLGGLDNEGKGCVYTYD 131
+ +Y+ + ++ LLS L+ KR Y F ++GG D E K +++ D
Sbjct: 67 RSELTLYEIRAGSKLDTDGAVSLLSAVLFNKRLSLNLIYGEF-IIGGYDTEPK--LFSID 123
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G + ++ GSG + L+ K ++E E + L +S
Sbjct: 124 EAGGQGKDKFTVTGSGGVFALGVLEGDYKD-------------NMTEEEGIKLAYKAISS 170
Query: 192 ATERDIYTANKLEIVVLNKDG 212
+ RD+YT ++I V+NK G
Sbjct: 171 SIRRDVYTGEGVDIAVINKKG 191
>gi|326488821|dbj|BAJ98022.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512002|dbj|BAJ95982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ K + SG +D +
Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYIGLSGLASDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L +H +YQ + + M L+S LY KRF PY+ ++ GL + +
Sbjct: 62 TLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGENDQPFIC 121
Query: 129 TYDAVGSYE 137
T D +G+ E
Sbjct: 122 TMDCIGAKE 130
>gi|304315325|ref|YP_003850472.1| proteasome, subunit beta [Methanothermobacter marburgensis str.
Marburg]
gi|302588784|gb|ADL59159.1| predicted proteasome, subunit beta [Methanothermobacter
marburgensis str. Marburg]
Length = 210
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V A + R S G I + KI K+ + +G AD ++L K
Sbjct: 8 KGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKY 67
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ ++++++S A L +N L+ RF+P+ +LGG+D G +Y+ D
Sbjct: 68 LKAEAALYRMRNSERISIEAAAALAANILHSSRFYPFIVQTLLGGVDETG-AKIYSLDPS 126
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G + S GSGS + L+++ L +A+D+ SA
Sbjct: 127 GGMIPDRFVSTGSGSPVAYGVLEDRYAD-------------ELYVDDAIDIAIRAIKSAM 173
Query: 194 ERDIYTANKLEIVVLNKD 211
ERD Y+ N + + + ++
Sbjct: 174 ERDTYSGNGILVATVTEE 191
>gi|169235741|ref|YP_001688941.1| proteasome beta subunit [Halobacterium salinarum R1]
gi|302595858|sp|B0R4C8.1|PSB_HALS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595910|sp|Q9HR36.2|PSB_HALSA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|167726807|emb|CAP13593.1| proteasome beta subunit [Halobacterium salinarum R1]
Length = 243
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILS-RDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + D + A+D R S G ++S ++ K+ ++ ++ SG ++ +
Sbjct: 48 GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRS 107
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + + MS A+ + SN L FF +LGG+D++G G V++ D
Sbjct: 108 LRAEANLYEARRGEYMSIDALSTMASNLLRGGPFFRVVP--ILGGVDDDG-GHVFSLDPA 164
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS Y++QGSG MP+ L+ Q+ L+ A+A + SA+
Sbjct: 165 GSSMSDTYTAQGSG----MPYALGVLE---------QEYSEDLTMADAEQVAAHAVKSAS 211
Query: 194 ERDIYTANKLEIVVLNKDGI----HREY 217
ERD + N + I + DG+ H+E+
Sbjct: 212 ERDTASGNGIHITKITHDGLTTVGHKEF 239
>gi|195038067|ref|XP_001990482.1| GH18224 [Drosophila grimshawi]
gi|193894678|gb|EDV93544.1| GH18224 [Drosophila grimshawi]
Length = 205
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG VA+ G D A D R +S D+ K+ +A + + +G Q D+ ++
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R IY+ + N++M+ +LS+ LY RF PY+ V+ GLD + K + D
Sbjct: 67 LMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPFICNMDL 126
Query: 133 VG-SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G E + G+ + + + + P L P Q L E A +V +
Sbjct: 127 IGCPNEPDDFVVAGTCAEQLYGMCETLWR---PDLEPDQ-----LFEVIAQSMV-----N 173
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + ++ KD I ++ R D
Sbjct: 174 AFDRDAMSGWGATVFIIEKDKITERSLKTRMD 205
>gi|345004933|ref|YP_004807786.1| proteasome endopeptidase complex subunit beta [halophilic archaeon
DL31]
gi|344320559|gb|AEN05413.1| proteasome endopeptidase complex, beta subunit [halophilic archaeon
DL31]
Length = 242
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + I D V A D R S G+ + S+D K+ ++ + +G + + L + L
Sbjct: 48 GTTTLGIDTGDAVVLATDMRASLGHMVSSKDVQKVEQVHPHGALTIAGSVSAAQNLIETL 107
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +++ + K+MS A+ L N L F Y +LGG+D+EG VY+ DA+G
Sbjct: 108 RAESNLFEVRRGKEMSMQALSTLTGNLLRSGAF--YIVSPILGGVDSEGS-HVYSIDALG 164
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
Y+ GSGS + L+ + L + A T ++A SA E
Sbjct: 165 GTTEEDYAVSGSGSQFALGVLEQEYDDD----LDIEGAKTVATKA---------IKSAME 211
Query: 195 RDIYTANKLEIVVLNKDGIH 214
RD + N + I V+ +G+
Sbjct: 212 RDTASGNGINIAVVTDEGVE 231
>gi|268530996|ref|XP_002630624.1| C. briggsae CBR-PBS-3 protein [Caenorhabditis briggsae]
Length = 204
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 16/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
GGT VA+AG + A+D R+ + ++ D K+ K+ DK + +GFQ+D + + +
Sbjct: 7 TGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ R +Y+ + N+++ + +++SN Y RF Y++ ++ GLD+ K + D +
Sbjct: 67 IMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTI 126
Query: 134 G--SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G S R + + G+G ++ +N + + P + L EA A ++ S
Sbjct: 127 GCVSAPR-DFVAVGTGQEYLLGVCENFWREN---MKPDE-----LFEATAQSIL-----S 172
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ERD + + + KD ++ ++ R D
Sbjct: 173 CLERDAASGWGAVVYTITKDKVNISTIKARMD 204
>gi|397613757|gb|EJK62406.1| hypothetical protein THAOC_16986 [Thalassiosira oceanica]
Length = 363
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 45/205 (21%)
Query: 57 VMASSGFQADVKALQKLLAAR-HLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV 115
++ S+G AD +AL++ + + + M ++ LL LY +R FP+YSF V
Sbjct: 153 MVGSAGCAADCEALKRQMRLEVSALECSLRSGPMHVQSIANLLQQVLYSRRSFPFYSFCV 212
Query: 116 LGGLDNEG-----KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP-------- 162
+ G+ + G Y YDA+GSYERV +S G+G L+ P LD P
Sbjct: 213 VAGIGRDAHGDALSGYAYVYDAIGSYERVAVASSGTGRELMQPVLDRLFSEPCDGSDNSC 272
Query: 163 ---------------SPLLL---------------PAQDAVTPLSEAEAVDLVKTCFASA 192
P+ + P Q V+ S AV V T F S
Sbjct: 273 EQVRDGVSLVEGVGRDPMAISAGEQRVGAAGGLRPPVQTTVS-CSWQTAVKHVATAFQSV 331
Query: 193 TERDIYTANKLEIVVLNKDGIHREY 217
ER+I + + + V+ +G + Y
Sbjct: 332 AEREISVGDDVVVCVMRSNGSTQTY 356
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 8 WSPYDNNGGTCVAIAGADYCVTAADTRMST-GYSILSRDY 46
+ PY NGG A+AG D+ V A+DTR++ GY I SR Y
Sbjct: 27 FDPYQLNGGLVAAVAGKDFVVIASDTRLTDGGYGINSRKY 66
>gi|41614998|ref|NP_963496.1| hypothetical protein NEQ203 [Nanoarchaeum equitans Kin4-M]
gi|74579825|sp|Q74MP5.1|PSB_NANEQ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|40068722|gb|AAR39057.1| NEQ203 [Nanoarchaeum equitans Kin4-M]
Length = 196
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T + I D V A+D + S G + + KII + D ++A SG AD++ + K+L
Sbjct: 3 TIIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKT 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
+ + + M+ LLS+ LY RF+ ++ G N + +Y+ D +G+
Sbjct: 63 ELKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAGPINSKEFGIYSLDGIGAI 122
Query: 137 ERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
+ Y ++GSG + + L+ + +P ++ +A+ L + S+ R
Sbjct: 123 SEIKDYFAEGSGGVIALGTLEAEY-NPD------------ITVRDAIKLAEKALKSSIAR 169
Query: 196 DIYTANKLEIVVLNKDGIHREYMELRK 222
D+++ +EI + K G+ + ++E +K
Sbjct: 170 DVFSGYGIEIYTITKKGVEKLFLEAQK 196
>gi|374633938|ref|ZP_09706303.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373523726|gb|EHP68646.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 212
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V AAD R S G+ + ++ KI+ + ++ + ++G AD++ + L
Sbjct: 18 GTTTVGLVVKDAVVLAADRRASAGFFVANKMVRKILYIDERIGITTAGSVADLQFIYNYL 77
Query: 75 AARHLIYQHQH---NKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
IY + + N+ ++ A+ L+N L ++FPY ++GG D + + ++ D
Sbjct: 78 KN---IYHYNYISGNRPVTVKALATYLTNILSQSKYFPYLVQILIGGYDVQPR--LFNLD 132
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G Y + GSGS + M L++ + PS ++ EAV+L S
Sbjct: 133 YLGDMTEETYVATGSGSPVAMGVLEDGYR-PS------------MTPDEAVELATRAVLS 179
Query: 192 ATERDIYTANKLEIVVLNKDGIHRE 216
A +RD +T + + + KDG H+E
Sbjct: 180 AIKRDSFTGTGVIVTKITKDG-HQE 203
>gi|241957591|ref|XP_002421515.1| macropain subunit, putative; multicatalytic endopeptidase complex
subunit, putative; proteasome component, putative
[Candida dubliniensis CD36]
gi|223644859|emb|CAX40854.1| macropain subunit, putative [Candida dubliniensis CD36]
Length = 206
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P+ NGG VA+ G D A+D R+ +S ++ KI + DK + +G DV
Sbjct: 4 PFSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVIT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCVY 128
L++L + +Y+ + + + + L+S++LY +RF P++ ++ GL + + K +
Sbjct: 64 LKELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFIC 123
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D++G + + G+ S + ++ L P+ L +D +S+A
Sbjct: 124 GFDSIGCIDFSHDFIVSGTASDQLYGMCES-LYEPN---LEPEDLFETISQA-------- 171
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 -LLNAVDRDALSGWGAVVYIVTKDKVIKRVLKTRQD 206
>gi|356515898|ref|XP_003526634.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
type-3-A-like [Glycine max]
Length = 204
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 14/216 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
S ++ NG VA+ G + A+D R+ + D+ +I K+ DK + G D +
Sbjct: 2 SIFEYNGSALVAMVGKNCFAIASDRRLGVQPQTTATDFQRISKIHDKLFIGLXGLATDAQ 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 128
L + L H +YQ + + M L+S LY RF PY+ V+ GL ++ K +
Sbjct: 62 TLYQRLLFGHKLYQLREERDMKPQTFASLVSAILYENRFGPYFCQPVIAGLGDDDKPFIC 121
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
T DA+G+ E ++ G+ S + ++ K P + P E +++
Sbjct: 122 TMDAIGAKELAKDFAVAGTASESLYGACESMFK---PDMEP----------EELFEMISQ 168
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
S+ +RD + I V+ + ++ R D
Sbjct: 169 ALLSSVDRDCLSGWGGHIYVVTPTEVKERILKGRMD 204
>gi|115448935|ref|NP_001048247.1| Os02g0770000 [Oryza sativa Japonica Group]
gi|8671502|dbj|BAA96834.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|46805414|dbj|BAD16916.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113537778|dbj|BAF10161.1| Os02g0770000 [Oryza sativa Japonica Group]
gi|125541285|gb|EAY87680.1| hypothetical protein OsI_09094 [Oryza sativa Indica Group]
gi|125583826|gb|EAZ24757.1| hypothetical protein OsJ_08530 [Oryza sativa Japonica Group]
gi|215737147|dbj|BAG96076.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737608|dbj|BAG96738.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765462|dbj|BAG87159.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + V AAD+R STG + +R KI +L D + SG AD + + +
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADTQVISDYV 84
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N+L GG D G ++
Sbjct: 85 --RYFL--HQHTIQLGQPATVKVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIF 137
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+ G+ R ++ GSGS+ + LD++ K +S+ EA V
Sbjct: 138 SVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKE-------------GMSQEEAEKFVVKV 184
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N DG+ R++
Sbjct: 185 VSLAIARDGASGGVVRTVTINADGVSRKF 213
>gi|294495429|ref|YP_003541922.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
gi|302595753|sp|D5EAS6.1|PSB_METMS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|292666428|gb|ADE36277.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
Length = 210
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I +D V A + R + G I S+ KI ++ D M ++G D + L +++
Sbjct: 9 GTTTVGIVCSDGVVLATEKRATMGNFIASKTAKKIYQIDDLVGMTTAGSVGDAQQLVRMI 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV- 133
+ +Y+ + + ++ + LLSN L +R+FP ++GG+D G +++ DA+
Sbjct: 69 SVESKLYKMRRQESITIKGLTTLLSNILGGQRYFPLMVQLLVGGVDKNGP-AIFSLDAMG 127
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G+ E + GSGS + L+++ ++ E ++L +A
Sbjct: 128 GNIEETKAVATGSGSPMAYGVLEDRYHE-------------GINVDEGMELAVRALYNAM 174
Query: 194 ERDIYTANKLEIVVLNKDGIHR 215
+RD + N +++V + DG R
Sbjct: 175 KRDSASGNGIDVVKITADGYKR 196
>gi|444323175|ref|XP_004182228.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
gi|387515275|emb|CCH62709.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
Length = 205
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+ G D A D R+ + +S ++ KI +G DV
Sbjct: 4 PSSINGGVVVAMTGKDCVAIACDLRLGSQSLGVSNNFEKIFHYG-HVFFGITGLATDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L +L + +Y+ + N+ + L+S+TLY KRF PY+ V+ GL+++ GK +
Sbjct: 63 LNELFRYKTNMYKLKENRSIEPETFTNLVSSTLYSKRFGPYFVGPVVAGLNSKTGKPYIA 122
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L ++D +S+A
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LESEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + Y++ R+D
Sbjct: 171 -LLNAVDRDALSGWGAVVYIIKKDKVIKRYLKTRQD 205
>gi|328862302|gb|EGG11403.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 201
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+ +A+ G D A D R+ ++ ++ K+ + DK + G +D L++
Sbjct: 4 NGGSVIAMVGKDCVAIACDLRLGNQALTVACNFEKVFPVTDKVYIGLPGLASDTVTLRQQ 63
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
R +Y+ + + + M L+S+TLY KRF PY+ V+ GL+++ + + D +
Sbjct: 64 FRHRVNMYKMKEERTIEPETMAHLVSSTLYQKRFGPYFVEPVIAGLNSKNEPFIAATDLI 123
Query: 134 GSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G + G+ S + + L P+ L +D +S++ +A
Sbjct: 124 GCINFAKDFVVSGTASDKLFG-MAEALWEPN---LEPEDLFETISQS---------LMNA 170
Query: 193 TERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+RD Y+ + ++ KD I + ++ R D
Sbjct: 171 MDRDAYSGWGAVVWIIQKDQIIKRVLKSRMD 201
>gi|17535357|ref|NP_494913.1| Protein PBS-3 [Caenorhabditis elegans]
gi|17380195|sp|Q23237.1|PSB3_CAEEL RecName: Full=Proteasome subunit beta type-3; Short=Proteasome
subunit beta 3
gi|351050990|emb|CCD73694.1| Protein PBS-3 [Caenorhabditis elegans]
Length = 204
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
GGT VA+AG + A+D R+ + ++ D K+ K+ DK + +GFQ+D + + + +
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
R +Y+ + N+ + + +++SN Y RF Y++ ++ GLD+ K + D +G
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIG 127
Query: 135 SYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
+ + G+G ++ +N + + P + L EA A ++ S
Sbjct: 128 CVSAPRDFVAVGTGQEYLLGVCENFWREN---MKPDE-----LFEATAQSIL-----SCL 174
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
ERD + + + KD ++ ++ R D
Sbjct: 175 ERDAASGWGAVVYTITKDKVNVSTIKARMD 204
>gi|367001775|ref|XP_003685622.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
gi|357523921|emb|CCE63188.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
Length = 205
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+AG D A D R+ + +S ++ KI +G DV
Sbjct: 4 PSSINGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFNYG-HVFFGITGLATDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L ++ + +Y+ + + + QL+S+TLY KRF PY+ V+ G++++ GK +
Sbjct: 63 LNEVFRYKTNLYKLKEERPIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIA 122
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L A+D +S+A
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEAEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA +RD + + ++ KD + + ++ R+D
Sbjct: 171 -LLSAADRDALSGWGAVVYIIKKDKVIKRHLRTRQD 205
>gi|195395370|ref|XP_002056309.1| GJ10880 [Drosophila virilis]
gi|194143018|gb|EDW59421.1| GJ10880 [Drosophila virilis]
Length = 205
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG VA+ G D A D R +S D+ K+ +A + + +G Q D+ ++
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R IY+ + N++M+ +LS+ LY RF PY+ V+ GLD + K + D
Sbjct: 67 LMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPFICNMDL 126
Query: 133 VG-SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G E + G+ + + + + P L P Q L E A +V +
Sbjct: 127 IGCPNEPDDFVVAGTCAEQLYGMCETLWR---PDLEPDQ-----LFEVIAQSMV-----N 173
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + ++ KD I ++ R D
Sbjct: 174 AFDRDAMSGWGATVYIIEKDKITERTLKTRMD 205
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V I D V A++ R + G I + KI K+ + +G D + L +
Sbjct: 8 KGTTTVGIVCKDGIVFASEKRATLGNLIAHKAVDKIFKIDEHLATTVAGSVGDAQKLVEY 67
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L A +Y+ + K + A + SN L+ R FP+ ++GG+D G +Y+ D
Sbjct: 68 LKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGIDETGPK-IYSVDPA 126
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G Y S GSGS + L+++ K +S +A+++ S+T
Sbjct: 127 GGKIEDKYVSTGSGSPIAYGVLEDRYKK-------------DMSVEDAINIALRAIKSST 173
Query: 194 ERDIYTANKLEI-VVLNKDGIHR 215
+RD ++ + + + VV K+G R
Sbjct: 174 KRDTFSGDGISLAVVTEKEGFKR 196
>gi|195111548|ref|XP_002000340.1| GI10178 [Drosophila mojavensis]
gi|193916934|gb|EDW15801.1| GI10178 [Drosophila mojavensis]
Length = 205
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG VA+ G D A D R +S D+ K+ +A + + +G Q D+ ++
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R IY+ + N++M+ +LS+ LY RF PY+ V+ GLD + K + D
Sbjct: 67 LMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPFICNMDL 126
Query: 133 VG-SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G E + G+ + + + + P L P Q +++ +
Sbjct: 127 IGCPNEPDDFVVAGTCAEQLYGMCETLWR---PDLEPDQ----------LFEVISQSMVN 173
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + ++ KD I ++ R D
Sbjct: 174 AFDRDAMSGWGATVYIIEKDKITERSLKTRMD 205
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A D R + G I ++ K+ K+ D M +G D +AL + +
Sbjct: 10 GTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYV 69
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A +Y+ + K + + L+SN L+ R FP+ + ++GG D +++ D +G
Sbjct: 70 SAEAKLYKMRTGKNIPPLSCATLISNILHGNRMFPFLTQLIIGGYDLLYGPRLFSLDPIG 129
Query: 135 SY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E +++ GSG SP+ + + ++ + ++L SA
Sbjct: 130 GLNEESSFTATGSG-------------SPTAYGILELEYSKDMTLKDGLNLAIKALISAM 176
Query: 194 ERDIYTANKLEIVVLNKDGI 213
ERD ++ N + + +NK+G+
Sbjct: 177 ERDAFSGNGISLAYVNKEGV 196
>gi|290993280|ref|XP_002679261.1| predicted protein [Naegleria gruberi]
gi|284092877|gb|EFC46517.1| predicted protein [Naegleria gruberi]
Length = 205
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NG VA+ G + AADTR + D KI K+ DK + +G DV+ + +
Sbjct: 7 NGAGIVAMTGKNCVAIAADTRYGIRQQTVGTDMQKIFKIHDKLFIGLNGLATDVQTVNEK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDA 132
L R +Y + + + + L+SN LY KRF P++ V+ GL+ E K + D
Sbjct: 67 LKFRMNMYNLKEERDIKPSSFANLMSNILYEKRFGPWFIEPVIAGLEGPENKPFICAQDL 126
Query: 133 VGSYERVGYSSQGSGSTLIMP-FLDNQLKSPS---PLLLPAQDAVTPLSEAEAV-DLVKT 187
+G+ P F DN + S + L + P E E + +++
Sbjct: 127 IGA-----------------PCFTDNFVVSGTCSEALYGMCESLYKPDMEPEDLFEVISQ 169
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
C +A +RD + + V+ D I + +++R+D
Sbjct: 170 CLLAAVDRDCISGWGAVVHVITPDSITTKRLKVRQD 205
>gi|62858119|ref|NP_001016503.1| proteasome beta 3 subunit [Xenopus (Silurana) tropicalis]
gi|163916422|gb|AAI57195.1| proteasome (prosome, macropain) subunit, beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 205
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G D AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ +++N LY +RF PYY V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG-SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G E + G+ S + ++ L P + +D +S+A +
Sbjct: 127 IGCPMETEDFVVSGTCSEQMYGMCES-LWEPD---MEPEDLFETISQA---------MLN 173
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + + V+ KD I ++ R D
Sbjct: 174 AVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 205
>gi|365981473|ref|XP_003667570.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
gi|343766336|emb|CCD22327.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
Length = 205
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 103/216 (47%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+AG D A D R+ + +S ++ KI + +G DV
Sbjct: 4 PSSINGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFHYG-HVFLGITGLATDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L + + +Y+ + ++ + QL+S+TLY KRF PY+ V+ G++++ GK +
Sbjct: 63 LSETFRYKSNLYELKEDRAIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIA 122
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G + + G+ S + ++ L P+ L ++D +S+A
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LESEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++++R+D
Sbjct: 171 -LLNAADRDALSGWGAVVYIIKKDKVIKRHLKMRQD 205
>gi|171696000|ref|XP_001912924.1| hypothetical protein [Podospora anserina S mat+]
gi|170948242|emb|CAP60406.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+GG CVA+ G D A D R+ +S ++ KI + D + +G DV + L
Sbjct: 5 DGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDNVFLGLTGLATDVATVSDL 64
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDA 132
+ +Y+ + +Q++ L+S++LY +RF P++ V+ GLD + G+ + +D+
Sbjct: 65 FRYKVNMYRLREERQIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGQPFICGFDS 124
Query: 133 VGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G + + G+ + + ++ L P+ L + + + +
Sbjct: 125 IGCIDFAKDFIVSGTATEQLFGMCES-LWEPN------------LGPDQLFETISQSLLN 171
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + ++ KD + + ++ R+D
Sbjct: 172 AVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 203
>gi|70944654|ref|XP_742236.1| beta3 proteasome subunit [Plasmodium chabaudi chabaudi]
gi|56521097|emb|CAH75996.1| beta3 proteasome subunit, putative [Plasmodium chabaudi chabaudi]
Length = 204
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 21/216 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRM-STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G CVAIA D R+ S ++ +S +++KI K+ D + SG D+++L +L
Sbjct: 3 GSQCVAIA--------CDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYEL 54
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYY------SFNVLGGLDNEGKGCV 127
L R +YQ + +M+ +LSN LY RF PY+ F V +D G
Sbjct: 55 LRYRVNLYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTN 114
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+ +Y+ +G + + F+ N + + + + E + V
Sbjct: 115 VYEPYLNAYDLIGAKCETN------DFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQ 168
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
C SA +RD + E+ VL D I ++ ++ R D
Sbjct: 169 CLLSALDRDCLSGWGAEVYVLTPDKIIKKKLKARMD 204
>gi|125778116|ref|XP_001359838.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|195157484|ref|XP_002019626.1| GL12496 [Drosophila persimilis]
gi|54639588|gb|EAL28990.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|194116217|gb|EDW38260.1| GL12496 [Drosophila persimilis]
Length = 205
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG VA+ G D A D R +S D+ K+ +A + + +G Q D+ ++
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + N++M+ +LS+ LY RF PY+ V+ GLD + K V D
Sbjct: 67 LMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTLKPFVCNMDL 126
Query: 133 VG-SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G E + G+ + + + K P L P Q +++ +
Sbjct: 127 IGCPNEPDDFVVAGTCAEQLYGMCETLWK---PDLQPDQ----------LFEVIAQSMMN 173
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + ++ KD I ++ R D
Sbjct: 174 AFDRDAMSGWGATVYIIEKDKITERSLKTRMD 205
>gi|302501602|ref|XP_003012793.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
gi|291176353|gb|EFE32153.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
Length = 212
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+GG CVA+ G D A D R+ +S ++ KI A + +G DV + +L
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDA 132
L + +Y+ + + +S + L+S++LY KRF P++ VL G+++ GK + +D+
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 133 VGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G + + G+ S + ++ L P L +D +S+A +
Sbjct: 134 IGCIDFAKNFIVSGTASDQLYGTCES-LWEPD---LEPEDLFETISQA---------LLN 180
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + ++ KD + + ++ R+D
Sbjct: 181 AVDRDALSGWGAYVYIIEKDKVTKRKLKGRQD 212
>gi|313228966|emb|CBY18118.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+ V ++G + A+D R +S D+ KI K+ DK + SG D++ +
Sbjct: 6 NGGSIVGMSGDNCVCIASDNRYGQQLHTISTDFPKIFKITDKIFIGLSGLATDIQTVLNK 65
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ + +Y+ + N++MS ++SN LY +RF P+++ V+ L+++G + D +
Sbjct: 66 IKYKVNMYELRENRKMSPKCFKTMVSNLLYERRFGPFFAEPVIVALNDDGTTMLCGMDCL 125
Query: 134 GSYE 137
G+ E
Sbjct: 126 GAAE 129
>gi|315045460|ref|XP_003172105.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
gi|311342491|gb|EFR01694.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
Length = 212
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 15/213 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
++GG CVA+ G D A D R+ +S ++ KI A + +G DV + +
Sbjct: 13 SDGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQ 72
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCVYTYD 131
LL + +Y+ + + +S + L+S++LY KRF P++ VL G+++ GK + +D
Sbjct: 73 LLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFD 132
Query: 132 AVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
++G + + G+ S + ++ L P L +D +S+A
Sbjct: 133 SIGCIDFAKNFIVSGTASDQLYGTCES-LWEPD---LEPEDLFETISQA---------LL 179
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 180 NAVDRDALSGWGAYVYIIEKDKVTKRKLKGRQD 212
>gi|374636366|ref|ZP_09707939.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
gi|373559248|gb|EHP85553.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
Length = 220
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A D R + G I ++ K+ K+ D M +G D +AL + +
Sbjct: 10 GTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYV 69
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A +Y+ + K + + L+SN L+ R FP+ + ++GG D +++ D VG
Sbjct: 70 SAEAKLYKMRTGKNIPPLSCATLMSNILHGSRMFPFLTQLIIGGYDFLYGPRLFSLDPVG 129
Query: 135 SYERVGY-SSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
Y ++ GSGS L +L+ +LL + ++L SA
Sbjct: 130 GLNEESYFTATGSGSPTAYGVL--ELEYSRDMLLK-----------DGLNLSVKALMSAM 176
Query: 194 ERDIYTANKLEIVVLNKDGIH 214
ERD ++ N + + +NK+G+
Sbjct: 177 ERDAFSGNGISLAYVNKEGVK 197
>gi|302662910|ref|XP_003023105.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
gi|291187083|gb|EFE42487.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
Length = 212
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+GG CVA+ G D A D R+ +S ++ KI A + +G DV + +L
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDA 132
L + +Y+ + + +S + L+S++LY KRF P++ VL G+++ GK + +D+
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 133 VGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G + + G+ S + ++ L P L +D +S+A +
Sbjct: 134 IGCIDFAKNFIVSGTASDQLYGTCES-LWEPD---LEPEDLFETISQA---------LLN 180
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + ++ KD + + ++ R+D
Sbjct: 181 AVDRDALSGWGAYVYIIEKDKVTKRKLKGRQD 212
>gi|410084182|ref|XP_003959668.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
gi|372466260|emb|CCF60533.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
Length = 205
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+AG D A D R+ + +S ++ KI + +G DV
Sbjct: 4 PSSINGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFNY-EHVFFGITGLATDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L ++ + +Y+ + ++ + QL+S+TLY +RF PY+ V+ G++++ GK +
Sbjct: 63 LNEVFRYKTNLYKLKEDRAIEPETFAQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIA 122
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L A+D +S+A
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEAEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + + +R+D
Sbjct: 171 -LLNAADRDALSGWGAVVYIIKKDKVIKRNLRMRQD 205
>gi|68069127|ref|XP_676474.1| beta3 proteasome subunit [Plasmodium berghei strain ANKA]
gi|56496189|emb|CAH97578.1| beta3 proteasome subunit, putative [Plasmodium berghei]
Length = 204
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRM-STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G CVAIA D R+ S ++ +S +++KI K+ D + SG D+++L +L
Sbjct: 3 GSQCVAIA--------CDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYEL 54
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYY------SFNVLGGLDNEGKGCV 127
L R +YQ + M+ +LSN LY RF PY+ F V +D G
Sbjct: 55 LRYRVNLYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKTN 114
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+ +Y+ +G + S F+ N + + + + E + V
Sbjct: 115 VYEPYLNAYDLIGAKCETS------DFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQ 168
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
C SA +RD + E+ VL D I ++ ++ R D
Sbjct: 169 CLLSALDRDCLSGWGAEVYVLTPDKIIKKKLKARMD 204
>gi|448727796|ref|ZP_21710145.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
gi|445789782|gb|EMA40461.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
Length = 228
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 25 DYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ 84
D V A D R S G + S+ KI ++ + + SG + +AL L A +Y+ +
Sbjct: 44 DGVVLATDRRASAGNLVASKRAKKIAEIHPRGALTISGAVSAAQALISNLQAEVDLYEAR 103
Query: 85 HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQ 144
++MS A+ L SN L F Y +LGG+D+EG +Y+ D GS Y +
Sbjct: 104 RGEEMSMQALSTLTSNFLRSGAF--YIVQPILGGVDDEG-AHIYSIDPAGSVMEEEYDAT 160
Query: 145 GSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLE 204
GSGS L+ Q + LS EA + SA ERD + N +
Sbjct: 161 GSGSPFAYGVLEQQYED-------------GLSNDEARTVAARAVKSAVERDTASGNGII 207
Query: 205 IVVLNKDGIHRE 216
I + +DG+ E
Sbjct: 208 ISEITEDGVEIE 219
>gi|83769195|dbj|BAE59332.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 203
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 101/213 (47%), Gaps = 15/213 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
+NGG CVA+ G D A D R+ +S ++ KI + + +G DV +
Sbjct: 4 HNGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFLGLTGLATDVSTVSD 63
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCVYTYD 131
L + +Y+ + + ++ + L+S++LY +RF P++ V+ G+++ GK + +D
Sbjct: 64 LFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFICGFD 123
Query: 132 AVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 190
++G + + G+ S + ++ + P L P +D +S+A
Sbjct: 124 SIGCIDFAKDFIVSGTASDQLFGTCESLWE---PDLAP-EDLFETISQA---------LL 170
Query: 191 SATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA +RD + ++ ++ KD + + ++ R+D
Sbjct: 171 SAVDRDALSGWGAQVYIIEKDKVTKRLLKGRQD 203
>gi|254168241|ref|ZP_04875087.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|254168404|ref|ZP_04875249.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289595801|ref|YP_003482497.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
boonei T469]
gi|302595865|sp|B5IEE5.1|PSB_ACIB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|197622685|gb|EDY35255.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|197622750|gb|EDY35319.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289533588|gb|ADD07935.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
boonei T469]
Length = 210
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 25 DYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ 84
D V + R S I + K+ KL M ++G D++ L + + A +Y+ +
Sbjct: 17 DGVVMGTEHRASMETFIAHKTAQKLYKLDYNIGMTTAGLVGDLQVLVRYMRAEINLYRIR 76
Query: 85 HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQ 144
M A LLSN L ++FFPYY ++GG D++G V+ DA G Y+S
Sbjct: 77 RKMYMPVGAAATLLSNILNERKFFPYYVGLLVGGFDSKGY-HVFAIDAAGGAIEDKYASV 135
Query: 145 GSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLE 204
GSGS + L+++ K LS E ++LV +A RD + + +
Sbjct: 136 GSGSLFVYGVLEDRWKD-------------DLSLDEGINLVIRGINAAMRRDAASGDGIS 182
Query: 205 IVVLNKD 211
+ + KD
Sbjct: 183 VATITKD 189
>gi|341885035|gb|EGT40970.1| hypothetical protein CAEBREN_25310 [Caenorhabditis brenneri]
Length = 223
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 67/121 (55%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
GGT VA+AG + A+D R+ + ++ D K+ K+ DK + +GFQ+D + + +
Sbjct: 7 TGGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ R +Y+ + N+++ + +++SN Y RF Y++ ++ GLD+ K + D +
Sbjct: 67 IMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTI 126
Query: 134 G 134
G
Sbjct: 127 G 127
>gi|448738912|ref|ZP_21720932.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
gi|445800726|gb|EMA51074.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
Length = 228
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 25 DYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ 84
D V A D R S G + S+ KI ++ + + SG + +AL L A +Y+ +
Sbjct: 44 DGVVLATDRRASAGNMVASKRAQKIAEIHPRGALTISGAVSAAQALISNLRAEADLYEAR 103
Query: 85 HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQ 144
++MS A+ L SN L F Y +LGG+D+EG +Y+ D GS Y +
Sbjct: 104 RGEEMSMQALSTLTSNFLRSGAF--YIVQPILGGVDDEG-AHIYSIDPAGSVMEEEYDAT 160
Query: 145 GSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLE 204
GSGS L+ Q + LS EA + SA ERD + N +
Sbjct: 161 GSGSPFAYGVLEQQYED-------------GLSNDEARTVAARAVKSAVERDTASGNGII 207
Query: 205 IVVLNKDGIHRE 216
+ + +DG+ E
Sbjct: 208 LSEITEDGVEIE 219
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I + A + R + G I S+ K+ + DK M +G D + L +++
Sbjct: 11 GTTTVGIVFDGGVILATERRATMGNLIASKKAKKVHAITDKIGMTIAGGVGDAQQLVRII 70
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+Y+ + +++S A +LSN L RF PYY ++GG+D G VY+ DA G
Sbjct: 71 NVECNLYEIRRGQKISVGAAATILSNYLNQNRFSPYYVQLLVGGVDTSGP-SVYSVDAAG 129
Query: 135 SYE-RVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
+ S GSGS L+++ K P+ ++E EA++L +A
Sbjct: 130 GATLEENFVSTGSGSLTAYGVLEDRFK-PN------------MTEEEAIELAVRALRAAM 176
Query: 194 ERDIYTANKLEIVVLNKD 211
RD + +V++ ++
Sbjct: 177 LRDSASGEGYNVVIITQE 194
>gi|255731824|ref|XP_002550836.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
gi|240131845|gb|EER31404.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
Length = 206
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P+ NGG VA+ G + A+D R+ +S ++ KI +++ K + +G +DV
Sbjct: 4 PFSINGGAAVAMIGKECIAIASDLRLGQQSLGVSNNFEKIFEISPKTYLGLTGLASDVLT 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L++L + +Y+ + + + + L+S++LY +RF P++ ++ GLD++ K +
Sbjct: 64 LKELFRFKTNLYKLREDHSIEPSTLANLISSSLYERRFGPWFVSPIVAGLDSKTNKPFIC 123
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D++G + + G+ S + ++ L P+ L E + +
Sbjct: 124 GFDSIGCIDYSHDFIVSGTASDQLYGMCES-LYEPN------------LEPEELFETISQ 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 171 ALLNAVDRDALSGWGAVVYIITKDKVTKRVLKTRQD 206
>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
Length = 217
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I D + A + R++ I+ ++ K+ ++ M +G D + L +
Sbjct: 6 ETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVR 65
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+ A +Y+ Q M A+ LLSN L ++ PY ++GG+D V++ DA
Sbjct: 66 YMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPH--VFSIDA 123
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G Y+S GSGS + L++Q ++ E VDLV ++A
Sbjct: 124 AGGSVEDIYASTGSGSPFVYGVLESQYSE-------------KMTVDEGVDLVIRAISAA 170
Query: 193 TERDIYTANKLEIVVLN-KDGIHREYMELRKD 223
+RD + +++ V+ KDG Y++L D
Sbjct: 171 KQRDSASGGMIDVAVITRKDG----YVQLPTD 198
>gi|357466571|ref|XP_003603570.1| Proteasome subunit beta type [Medicago truncatula]
gi|217071334|gb|ACJ84027.1| unknown [Medicago truncatula]
gi|355492618|gb|AES73821.1| Proteasome subunit beta type [Medicago truncatula]
gi|388518779|gb|AFK47451.1| unknown [Medicago truncatula]
Length = 232
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 13 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 72
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N ++GG D G +Y
Sbjct: 73 --RYFL--HQHTIQLGQPATVKVAANLV---RLLAYNNKNNLQTGLIVGGWDKYEGGQIY 125
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
G+ + ++ GSGS+ + F D K +++ EA DLVK
Sbjct: 126 GVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKD-------------GMTKDEAEDLVKKA 172
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V++N +G+ R +
Sbjct: 173 VSLAIARDGASGGVVRTVIINSEGVTRNF 201
>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
gi|130867|sp|P28061.1|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
Length = 211
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
G T V I D + A + R++ I+ ++ K+ ++ M +G D + L +
Sbjct: 6 ETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVR 65
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDA 132
+ A +Y+ Q M A+ LLSN L ++ PY ++GG+D V++ DA
Sbjct: 66 YMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPH--VFSIDA 123
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
G Y+S GSGS + L++Q ++ E VDLV ++A
Sbjct: 124 AGGSVEDIYASTGSGSPFVYGVLESQYSE-------------KMTVDEGVDLVIRAISAA 170
Query: 193 TERDIYTANKLEIVVLN-KDGIHREYMELRKD 223
+RD + +++ V+ KDG Y++L D
Sbjct: 171 KQRDSASGGMIDVAVITRKDG----YVQLPTD 198
>gi|327275596|ref|XP_003222559.1| PREDICTED: proteasome subunit beta type-3-like [Anolis
carolinensis]
Length = 205
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLFIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ + ++SN LY +RF PYY+ V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLD 113
>gi|452837699|gb|EME39641.1| hypothetical protein DOTSEDRAFT_75329 [Dothistroma septosporum
NZE10]
Length = 206
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ K+ + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKVFNYGPSLYLGLTGLATDVS 62
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCV 127
++ +L + +Y+ + + ++ L+S++LY +RF P++ V+ G+++ GK +
Sbjct: 63 SVSELFRYKVNMYRLREERDIAPQTFANLVSSSLYERRFGPWFISPVVAGINHTTGKPFI 122
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + L P L +D +S+A
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASDQLFGTCEG-LWEPD---LGPEDLFETISQA------- 171
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 --LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|401626020|gb|EJS43988.1| pup3p [Saccharomyces arboricola H-6]
Length = 205
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+AG D A D R+ + +S + KI +G +DV
Sbjct: 4 PSSINGGVVVAMAGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFFGVTGLASDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L ++ + +Y+ + ++ + QL+S++LY +RF PY+ V+ G++++ GK +
Sbjct: 63 LNEMFRYKTNLYKLREDRAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIA 122
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L +D +S+A
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEPEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + Y+++R+D
Sbjct: 171 -LLNAVDRDALSGWGAVVYIIKKDKVVKRYLKMRQD 205
>gi|198450366|ref|XP_002137083.1| GA26779 [Drosophila pseudoobscura pseudoobscura]
gi|198131005|gb|EDY67641.1| GA26779 [Drosophila pseudoobscura pseudoobscura]
Length = 208
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T +AI G D+ + +ADT + G +L + SKI +L D V+A++G D + +A
Sbjct: 3 TILAIKGKDFVLISADTVVGKGLLVLGQGKSKIERLGDFAVIAAAGNGGDPQRFMSFIAR 62
Query: 77 RHLIYQHQHNKQM-SCPAMGQLLSNTLY--YKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+++ QHN Q S +M +Y + ++ G D G ++ D
Sbjct: 63 HMALHRVQHNGQSPSVRSMAHFAGKQIYSSVNANLNFKVSALIAGWDPRGGPQLHQIDEF 122
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G V YS QG G +P ++ + +D + E A ++K C A+
Sbjct: 123 GGLVSVPYSGQGLG----LPVFNSIFQ---------KDYSPDIDEPTAYHVLKKCVAAVH 169
Query: 194 ERDIYTANKLEIVVLNKDGI 213
ER + E+ V+ ++GI
Sbjct: 170 ERVVLNMRNFEVFVVKENGI 189
>gi|399218578|emb|CCF75465.1| unnamed protein product [Babesia microti strain RI]
Length = 192
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 27 CVT-AADTRMSTG-YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ 84
CV+ +D R+ ++ + D+ K+ K+ +KC SSG D++++ K L + I++ +
Sbjct: 6 CVSIGSDLRLGVNRFTTIGNDFPKVFKINNKCFFGSSGLATDIQSILKELKFKIKIFELE 65
Query: 85 HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
+ + ++G +++N LY +RF P++ ++ GLD++ + + +YD +G+
Sbjct: 66 QERDIGIQSLGHVVANMLYSRRFGPWFISPIVAGLDDKNRPFISSYDLIGA 116
>gi|126465836|ref|YP_001040945.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595723|sp|A3DN27.1|PSB2_STAMF RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126014659|gb|ABN70037.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 208
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD--VKALQKLL 74
T V I DY V AAD R + G + + KII++ D M SG AD + A Q
Sbjct: 11 TTVGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRIDDYIAMTISGLVADAEIIAEQARF 70
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTL-YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
AR Y+ + + + A+ LS L Y R PY +LGG D+ G Y D
Sbjct: 71 IARK--YKLELGRPIKVSALASNLSIILNAYLRMSPYIVQLLLGGYDDNGPHLFYI-DLF 127
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS Y + GSGS L+ + +S LS EA +L ++AT
Sbjct: 128 GSLSEEKYMATGSGSPTAFGVLEEEYRS-------------DLSLDEAKELAFKAVSAAT 174
Query: 194 ERDIYTANKLEIVVLN 209
+RD ++ ++IVV+
Sbjct: 175 KRDGFSGEGVDIVVIG 190
>gi|412992168|emb|CCO19881.1| predicted protein [Bathycoccus prasinos]
Length = 209
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 15/206 (7%)
Query: 20 AIAGADYCVTAADTRMSTGYS-ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARH 78
A+ G + A+D R+ + D+ KI ++ + +A SG +D+ L+ +H
Sbjct: 17 AMCGHECVAIASDNRLGINQQQTTAIDFQKIFQIHPRLFLAMSGLASDMHTLKATFEFKH 76
Query: 79 LIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER 138
+Y+ + N+ M ++S TLY KRF PYY V+ GLD K + D +G+
Sbjct: 77 KLYELRENRVMEPKTFASVVSTTLYEKRFGPYYVEPVIAGLDKASKPYITGMDLIGAAAP 136
Query: 139 V-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDI 197
+ G+ S + ++ K L E +++ C S + RD
Sbjct: 137 TENFVVAGNNSESLFGVCESMYKE-------------NLEPEELFEVISQCLLSGSGRDC 183
Query: 198 YTANKLEIVVLNKDGIHREYMELRKD 223
+ + V+ KDG+ + ++ R D
Sbjct: 184 LSGWGGTVYVITKDGVEVKSVKGRMD 209
>gi|356507848|ref|XP_003522675.1| PREDICTED: proteasome subunit beta type-6-like [Glycine max]
Length = 233
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 14 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYV 73
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N ++GG D G +Y
Sbjct: 74 --RYFL--HQHTIQLGQPATVKVAANLV---RLLSYNNKNFLETGLIVGGWDKYEGGQIY 126
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
G+ + ++ GSGS+ + F D K +++ EA DLVK
Sbjct: 127 GVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKE-------------GMTKDEAEDLVKKA 173
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V++N +G+ R +
Sbjct: 174 VSLAIARDGASGGVVRTVIINSEGVTRNF 202
>gi|66271073|gb|AAY43813.1| beta1 proteasome-7D [Aegilops tauschii]
gi|66271075|gb|AAY43814.1| beta1 proteasome-7D [Aegilops tauschii]
Length = 246
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + A V AAD+R STG + +R KI +L D + SG AD + + +
Sbjct: 25 GTTIVGVCYAGGVVLAADSRTSTGMYVANRASDKISQLTDNVYVCRSGSAADTQVISDYV 84
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSN---TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
R+ + HQH Q+ PA ++ SN L Y+ + ++GG D G +Y+
Sbjct: 85 --RYFL--HQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVP 140
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G+ R ++ GSGS+ + +D++ K +++ EA V +
Sbjct: 141 LGGTILRQPFAIGGSGSSYLYGLMDHEWKE-------------GMTQEEAEKFVVKVVSL 187
Query: 192 ATERDIYTANKLEIVVLNKDGIHREY 217
A RD + + V +N++G+ R +
Sbjct: 188 AIARDGASGGVVRTVTINEEGVKRSF 213
>gi|323454510|gb|EGB10380.1| hypothetical protein AURANDRAFT_71184 [Aureococcus anophagefferens]
Length = 535
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P +NG V +AG + A+DTR +S D+ K+ K +D+ + +G DV+
Sbjct: 191 PCSHNGAAIVCMAGKNCVAIASDTRFGLSQQTVSCDFQKVFKQSDRLFVGLAGLATDVQT 250
Query: 70 LQKLLAARH----LIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKG 125
L+ L + +Y+ + + M A LLS+ LY KRF PY+ V+ GL ++G
Sbjct: 251 LRNTLKFKREPALALYELREERVMKPEAFAALLSHMLYEKRFGPYFVEPVVAGLKDDGSP 310
Query: 126 CVYTYDAVGS 135
+ D +G+
Sbjct: 311 FLCGMDLIGA 320
>gi|269972971|emb|CBE67030.1| CG11981-PA [Drosophila atripex]
gi|269973424|emb|CBE66639.1| CG11981-PA [Drosophila ananassae]
gi|269973426|emb|CBE66640.1| CG11981-PA [Drosophila ananassae]
gi|269973428|emb|CBE66641.1| CG11981-PA [Drosophila ananassae]
gi|269973430|emb|CBE66642.1| CG11981-PA [Drosophila ananassae]
gi|269973432|emb|CBE66643.1| CG11981-PA [Drosophila ananassae]
gi|269973434|emb|CBE66644.1| CG11981-PA [Drosophila ananassae]
gi|269973436|emb|CBE66645.1| CG11981-PA [Drosophila ananassae]
gi|269973438|emb|CBE66646.1| CG11981-PA [Drosophila ananassae]
gi|269973440|emb|CBE66647.1| CG11981-PA [Drosophila ananassae]
gi|269973442|emb|CBE66648.1| CG11981-PA [Drosophila ananassae]
gi|269973444|emb|CBE66649.1| CG11981-PA [Drosophila ananassae]
gi|269973446|emb|CBE66650.1| CG11981-PA [Drosophila ananassae]
Length = 205
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG VA+ G D A D R +S D+ K+ +A + + +G Q D+ ++
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + N++M+ +LS+ LY RF PY+ V+ GLD
Sbjct: 67 LMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLD 113
>gi|338710899|ref|XP_001501618.2| PREDICTED: proteasome subunit beta type-3-like [Equus caballus]
Length = 205
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPQTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|224090541|ref|XP_002309021.1| predicted protein [Populus trichocarpa]
gi|222854997|gb|EEE92544.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 16 GTTIIGVTYNGGVVLGADSRTSTGIYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 75
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N ++GG D G +Y
Sbjct: 76 --RYFL--HQHTIQLGQPATVKVAANLV---RLLSYSNKNMLQTGMIIGGWDKYEGGKIY 128
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
G+ + ++ GSGST + F D K +++ EA LV
Sbjct: 129 GVPLGGTLLELPFTIGGSGSTYLYGFFDQAWKE-------------GMTQEEAEQLVVKA 175
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N +G+ R+Y
Sbjct: 176 VSLAIARDGASGGVVRTVTINSEGVTRKY 204
>gi|351721274|ref|NP_001236436.1| uncharacterized protein LOC100305513 [Glycine max]
gi|255625747|gb|ACU13218.1| unknown [Glycine max]
Length = 233
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 14 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYV 73
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N ++GG D G +Y
Sbjct: 74 --RYFL--HQHTIQLGQPATVKVAANLV---RLLAYNNKNFLQTGLIVGGWDKYEGGQIY 126
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
G+ + ++ GSGS+ + F D K +++ EA DLVK
Sbjct: 127 GVPLGGTTVQQPFAIGGSGSSYLYGFFDQAWKE-------------GMTKDEAEDLVKKA 173
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V++N +G+ R +
Sbjct: 174 VSLAIARDGASGGVVRTVIINSEGVTRNF 202
>gi|358388830|gb|EHK26423.1| hypothetical protein TRIVIDRAFT_86444 [Trichoderma virens Gv29-8]
Length = 261
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G + + I D V AAD S G D ++ AD ++ GF D+ +Q L
Sbjct: 40 GTSVIGIKFKDGVVMAADNLASYGSLARFTDVKRLRPFADSSIL---GFSGDISDMQYL- 95
Query: 75 AARHLI-------YQHQHNKQMSCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKG 125
RHLI Y+ +++ + + LS LY +R F P ++ ++GGLD+ G+
Sbjct: 96 -DRHLIDLSLSEAYESPDKPRLNAANLHRYLSKLLYNRRSKFDPLWNHLLVGGLDDNGEP 154
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
+ D +GS + G G+ L P + +P +++ LS EA+++V
Sbjct: 155 FLAAADLLGSTYSAPSLATGFGAMLAQPIMRR--------YVPDEESAKKLSREEAINIV 206
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K RD + + + V+ KDG+ EL++D
Sbjct: 207 KEAMKVLFYRDARSLDSYSLAVVTKDGV-----ELKED 239
>gi|297701417|ref|XP_002827712.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Pongo abelii]
Length = 218
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + L++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSLVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|47028283|gb|AAT09074.1| proteasome beta subunit [Bigelowiella natans]
Length = 204
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NG VA+ G D A+D R ++ D K+ ++ DK + SG DV+ L++
Sbjct: 7 NGSAIVAMVGKDCVAIASDMRYGIQQQTIACDMKKVFQMGDKLFIGLSGLLTDVQTLKQK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y + N+ M L+S+TLY KRF PY+ V+ GLD + + D +
Sbjct: 67 FDFKLKMYSLRENRPMRPKVFSSLVSSTLYEKRFGPYFVEPVVAGLDAKEGPFIAAMDLI 126
Query: 134 GS--YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G+ + + + G+ S + + K P + P E + + +
Sbjct: 127 GAPVFAK-DFVVSGTTSDELYGVCEAFWK---PNMGP----------DELFETISQSLLA 172
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + V+ KDG+ + ++ RKD
Sbjct: 173 AVDRDCLAGWGAIVHVITKDGVTTKQLKSRKD 204
>gi|82704967|ref|XP_726772.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482323|gb|EAA18337.1| 7006-8626 [Plasmodium yoelii yoelii]
Length = 204
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRM-STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G CVAIA D R+ S ++ +S +++KI K+ D + SG D+++L +L
Sbjct: 3 GSQCVAIA--------CDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYEL 54
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYY------SFNVLGGLDNEGKGCV 127
L R +YQ + M+ +LSN LY RF PY+ F V +D G
Sbjct: 55 LRYRVNLYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKIN 114
Query: 128 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+ +Y+ +G + + F+ N + + + + E + V
Sbjct: 115 VYEPYLNAYDLIGAKCETN------DFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQ 168
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
C SA +RD + E+ VL D I ++ ++ R D
Sbjct: 169 CLLSALDRDCLSGWGAEVYVLTPDKIIKKKLKARMD 204
>gi|297527490|ref|YP_003669514.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256406|gb|ADI32615.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 210
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQAD--VKALQKLL 74
T V I DY V AAD R + G + + KII++ D M SG AD + A Q
Sbjct: 13 TTVGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRIDDYIAMTISGLVADAEIIAEQARF 72
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTL-YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
AR Y+ + + + + LS L Y R PY +LGG DN G Y D
Sbjct: 73 IARK--YKLELGRPIKVSGLASNLSIILNTYLRASPYIVQLLLGGYDNNGPHLFYM-DLY 129
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS Y + GSGS L+ +S LS EA +L ++AT
Sbjct: 130 GSLSEEKYMATGSGSPTAFGVLEEGYRS-------------DLSLEEAKELAFKAVSAAT 176
Query: 194 ERDIYTANKLEIVVLNKD 211
RD ++ ++IVV+ D
Sbjct: 177 RRDGFSGEGVDIVVIGPD 194
>gi|195629028|gb|ACG36246.1| proteasome subunit beta type 6 precursor [Zea mays]
gi|413953290|gb|AFW85939.1| proteasome subunit beta type [Zea mays]
Length = 243
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 22 GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISDYI 81
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N+L GG D G ++
Sbjct: 82 --RYFL--HQHTIQLGQPATVKVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIF 134
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+ G+ + ++ GSGS+ + LD++ K +S+ EA V
Sbjct: 135 SVPLGGTILKQPFAIGGSGSSYLYALLDHEWKE-------------GMSQEEAEKFVVKV 181
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N DG+ R +
Sbjct: 182 VSLAMARDGASGGVVRTVTINADGVKRNF 210
>gi|448729804|ref|ZP_21712116.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
gi|445794125|gb|EMA44678.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
Length = 237
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 27 CVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN 86
V A D R S G + S+ KI ++ + + SG + +AL L A +Y+ + +
Sbjct: 55 VVLATDRRASFGNMVSSKQAKKIAEIHPRGALTISGAVSPAQALISNLRAEVDLYEARRS 114
Query: 87 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 146
++MS A+ L SN L FF + +LGG+D+EG +Y+ D GS Y++ GS
Sbjct: 115 EEMSMQALSTLTSNFLRSGAFFIVHP--ILGGVDDEGS-HIYSIDPSGSVMEEDYNATGS 171
Query: 147 GSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIV 206
GS L+ Q + LS EA + SA ERD + N + +
Sbjct: 172 GSPFAYGVLEQQYEE-------------GLSNDEAETVAAHAVKSAVERDTASGNGIIVS 218
Query: 207 VLNKDGIHREYME 219
+ +G+ E E
Sbjct: 219 TITDEGVTTEEYE 231
>gi|448727988|ref|ZP_21710328.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
gi|445788654|gb|EMA39360.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
Length = 225
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 19 VAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARH 78
V + A+ V AAD R S G + S++ KI+++ + SG + ++L + L A
Sbjct: 35 VGLTAAEGVVLAADMRASAGNMVASKNARKILQIHSSAALTISGSVSAAQSLVESLRAEV 94
Query: 79 LIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER 138
+Y+ + + MS A+ + +N L F VLGG+D+EG VY+ GS
Sbjct: 95 RLYETRRDTTMSLNALANVTANRLRSGNFQIVQP--VLGGVDDEGA-HVYSIGPGGSVME 151
Query: 139 VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIY 198
Y++ GSGS + L+ + + + DA T + A SATERD
Sbjct: 152 ETYAASGSGSPFALGVLEGEYDEEASV----DDARTTAARA---------VQSATERDTA 198
Query: 199 TANKLEIVVLNKDGI 213
+ N L + + ++G+
Sbjct: 199 SGNGLSLATITEEGV 213
>gi|452824734|gb|EME31735.1| 20S core proteasome subunit beta 4 [Galdieria sulphuraria]
Length = 193
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
+ +A+ G D+ ++AADT + ++ D KI++L +A G D + +
Sbjct: 3 SVIALVGKDFVLSAADTSNARSVIVMKDDVDKIMELDSHKTLAMGGEPGDFVQFTEYIQK 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTL-YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
+Y+ Q Q+S A+ + L R P + +LGG D C+Y D +G+
Sbjct: 63 NLHLYEFQTGLQLSTHAVANFIRGELARLIREAPVLANLLLGGFDEVSGPCLYYIDYLGT 122
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
E++ Y++QG S I+ LD + L + ++L+K C +R
Sbjct: 123 LEKLDYTAQGYASFFILGTLDRYYQKDITL-------------EQGIELMKRCIQQLGKR 169
Query: 196 DIYTANKLEIVVLNKDGIHR 215
+ + V++KDG+ +
Sbjct: 170 FVINQRNFIMKVVDKDGVRQ 189
>gi|331245973|ref|XP_003335621.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309314611|gb|EFP91202.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 204
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+ VA+ G A D R+ ++ ++ K+ ++ DK + G D L+ +
Sbjct: 7 NGGSVVAMVGKGCVAIACDLRLGNQALTVACNFEKVFQVTDKMFIGLPGLATDTFTLKNV 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
R +Y+ + + + M L+S+TLY KRF PY+ V+ GLD++ + + D +
Sbjct: 67 FRHRVNMYKMKEERVIEPQTMAHLISSTLYQKRFGPYFVEPVVAGLDSKNEPFIAATDLI 126
Query: 134 GSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFAS 191
G + G+ S S L A+ P L+ + + + +
Sbjct: 127 GCINFAKDFVVSGTAS--------------SKLFGMAEALWEPDLAPEDLFETISQTLLN 172
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD Y+ + ++ D + + ++ R D
Sbjct: 173 AVDRDAYSGWGAVVWIIEADQVTKRVLKSRMD 204
>gi|431890707|gb|ELK01586.1| Proteasome subunit beta type-3 [Pteropus alecto]
Length = 234
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 36 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 95
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 96 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 155
Query: 133 VG 134
+G
Sbjct: 156 IG 157
>gi|170030525|ref|XP_001843139.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
gi|167867380|gb|EDS30763.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
Length = 205
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG VA+ G + A D R ++ D+ KI ++ + G Q D+ + +
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKIFEINPHMYLGLVGLQTDILTVHQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + N+QM+ +LSN LY KRF PY+ V+ GLD
Sbjct: 67 LLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLD 113
>gi|296051291|gb|ADG86642.1| 20S proteasome subunit PBA1 [Populus tomentosa]
Length = 237
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 16 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 75
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N ++GG D G +Y
Sbjct: 76 --RYFL--HQHTIQLGQPATVKVAANLV---RLLSYNNKNFLQTGMIVGGWDKHEGGKIY 128
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
G+ + ++ GSGS+ + F D K D +T + EA LV
Sbjct: 129 GVPLGGTLLELPFTIGGSGSSYLYGFFDQAWK----------DGMT---QEEAEQLVVKA 175
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N +G+ R+Y
Sbjct: 176 VSLAIARDGASGGVVRTVTINSEGVSRKY 204
>gi|196003382|ref|XP_002111558.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
gi|190585457|gb|EDV25525.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
Length = 276
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T +A + + AAD+R S G I S+ K+I++ + +G AD +++
Sbjct: 72 HGTTTLAFKFKNGVIVAADSRASMGSYIGSQTVKKVIEINPYLLGTMAGGAADCSFWERV 131
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
LA R +Y+ ++ +++S A +LL+N +YY + ++ G D G G Y D+
Sbjct: 132 LAERCRVYELRNKERISVAAASKLLANMVYYYKGMGLSMGTMICGWDKRGPGLYYV-DSD 190
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G+ S GSGST LD+ K L + EA DL + AT
Sbjct: 191 GTRMTNYMFSVGSGSTYAYGILDSGFKH-------------DLEDEEAYDLARRAIFHAT 237
Query: 194 ERDIYTANKLEIVVLNKDG 212
RD Y+ + + + + G
Sbjct: 238 HRDAYSGGSVNLYHVKETG 256
>gi|298711226|emb|CBJ32446.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 204
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 63/122 (51%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NG +A+ G + +D+R+ ++ D+ KI K+ DK ++ G DV +++L
Sbjct: 7 NGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDKLMVGLPGLATDVITMKEL 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L R +Y+ + +++ L+S+ LY KRF PY+ ++ GL + + +D +
Sbjct: 67 LTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKEDNTPFISAFDLI 126
Query: 134 GS 135
G+
Sbjct: 127 GA 128
>gi|194701304|gb|ACF84736.1| unknown [Zea mays]
gi|194701404|gb|ACF84786.1| unknown [Zea mays]
gi|413942810|gb|AFW75459.1| proteasome subunit beta type [Zea mays]
Length = 244
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 23 GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISDYV 82
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N+L GG D G ++
Sbjct: 83 --RYFL--HQHTIQLGQPATVKVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIF 135
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+ G+ + ++ GSGS+ + LD++ K +S+ EA V
Sbjct: 136 SVPLGGTILKQPFAIGGSGSSYLYALLDHEWKE-------------GMSQEEAEKFVVKV 182
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N DG+ R +
Sbjct: 183 VSLAMARDGASGGVVRTVTINADGVKRNF 211
>gi|56541012|gb|AAH87457.1| Unknown (protein for MGC:99279) [Xenopus laevis]
Length = 205
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G D AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ +++N LY +RF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLD 113
>gi|346465029|gb|AEO32359.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 26/208 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 13 GTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 72
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N+L GG D G +Y
Sbjct: 73 --RYFL--HQHTIQLEQPATVKVAANLI---RLLSYQNKNMLQTGLIVGGWDKYEGGQIY 125
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+ G+ R ++ GSGS+ + F D K +S+ EA LV
Sbjct: 126 SVPLGGTILRQPFTIGGSGSSYLYGFFDQAWKE-------------GMSKDEAEKLVVKA 172
Query: 189 FASATERDIYTANKLEIVVLNKDGIHRE 216
+ A RD + + V++N DG+ R
Sbjct: 173 VSLAIARDGASGGVVRTVIINSDGVTRN 200
>gi|296425517|ref|XP_002842287.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638550|emb|CAZ86478.1| unnamed protein product [Tuber melanosporum]
Length = 593
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
+P+ NGG VA+ G D A D R+ +S D+ KI D + +G DV
Sbjct: 391 NPFSINGGAVVAMVGKDCVAIACDLRLGMQALTVSNDFPKIFNYGD-VYLGLTGLATDVT 449
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
++ +L + +Y+ + + + M L+S++LY KRF PY+ V+ G++ + GK +
Sbjct: 450 SVSELFRYKVNMYRLREERDIEPQTMANLVSSSLYEKRFGPYFVSPVIAGINQHSGKPFI 509
Query: 128 YTYDAVG 134
+D++G
Sbjct: 510 CGFDSIG 516
>gi|426348535|ref|XP_004041889.1| PREDICTED: proteasome subunit beta type-3 [Gorilla gorilla gorilla]
Length = 205
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPHTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|388508100|gb|AFK42116.1| unknown [Lotus japonicus]
Length = 233
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 14 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 73
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N ++GG D G ++
Sbjct: 74 --RYFL--HQHTIQLGQPATVKVAANLV---RLLSYNNKNFLETGLIVGGWDKYEGGQIF 126
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
G+ + ++ GSGS+ + F D K +++ EA DLVK
Sbjct: 127 GVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKD-------------GMTKDEAEDLVKKA 173
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V++N +G+ R +
Sbjct: 174 VSLAIARDGASGGVVRTVIINSEGVTRNF 202
>gi|116779982|gb|ABK21503.1| unknown [Picea sitchensis]
Length = 233
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 13 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAADSQVVSDYV 72
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N ++GG D G +Y
Sbjct: 73 --RYFL--HQHIIQLGQPATVKVTANLI---RLLSYNNKNTLETGLIVGGWDKYEGGSIY 125
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
G+ ++ ++ GSGS+ + FLD K +S+ EA LV
Sbjct: 126 GVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKE-------------GMSKDEAEALVVKS 172
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + VV+N +G+ R +
Sbjct: 173 VSLAIARDGASGGVVRTVVINSEGVTRNF 201
>gi|17541700|ref|NP_500125.1| Protein PBS-1 [Caenorhabditis elegans]
gi|351064427|emb|CCD72799.1| Protein PBS-1 [Caenorhabditis elegans]
Length = 239
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
+ G T +A+ V D+R S G I SR +KI + D V+ SG AD +A+
Sbjct: 21 STGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIAD 80
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL-GGLDNEGKGCVYTYD 131
+ +Y NK ++ Q+ LY R S +VL G D E G VY
Sbjct: 81 IAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR--EQLSASVLVAGWDEELGGQVYAIP 138
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G R ++ GSGST + FLD+Q + P L L E +A+ VK
Sbjct: 139 IGGFVSRQRSTASGSGSTFVQGFLDSQWR---PNLT--------LEECKAI--VKQAVGL 185
Query: 192 ATERDIYTANKLEIVVLNKDGIHRE 216
AT RD + + + V+NK G E
Sbjct: 186 ATFRDGSSGGVVRLAVINKAGSQFE 210
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T A+ D V AADTR S G I R KI K+ M +G AD + L +
Sbjct: 19 GTTTCALTCKDGVVLAADTRASAGLFIADRHVMKIQKVDQHLAMTIAGGVADAQNLVDTM 78
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+Y+ Q+ + M + +L SN L+ +R+FPYY ++ G ++ D G
Sbjct: 79 RYNANLYRFQNKELMPVKSAARLCSNILFNQRYFPYYVQIIMAGYTKNEGSQIHNIDLFG 138
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S + S GSGS + +L+++ + +S +A + A+A
Sbjct: 139 SMTTEKFISTGSGSPVAYGYLESEYRD-------------GMSVNDAYKVAMQAIAAAIR 185
Query: 195 RDIYTANKLEIVVLNKDGIHREYMELRKD 223
R+ T + + +V+++K+G Y EL K+
Sbjct: 186 RNAGTGDSINVVIIDKNG----YRELSKE 210
>gi|402077481|gb|EJT72830.1| proteasome component PUP3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG VA+ G D A D R+ +S ++ KI + D + +G DV
Sbjct: 3 SPFSINGGAAVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVS 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ L+S++LY +RF PY+ V+ GLD + +
Sbjct: 62 TVSDLFRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTSQPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + ++ L P+ L +D +S+A
Sbjct: 122 CGFDSIGCIDFAKDFIVSGTASEQLFGMCES-LWEPN---LEPEDLFETISQA------- 170
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
SA +RD + + ++ KD + + ++ R+D
Sbjct: 171 --LLSAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|164660346|ref|XP_001731296.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
gi|159105196|gb|EDP44082.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
Length = 201
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 64/121 (52%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+ +A+ G + A+D R+ +LS + K+ ++ D+ + G DV L++
Sbjct: 4 NGGSVIAMTGKNCVAIASDLRLGNQALLLSTQFDKVFRMTDRTYVGLPGLATDVATLREK 63
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
R +Y+ + ++ + +L+S+TLY +RF PY+ V+ G+++ + + D +
Sbjct: 64 FRYRLNMYRMKEDRDIEPETFAKLMSSTLYERRFGPYFIEPVVAGMNSNNEPFIAASDLI 123
Query: 134 G 134
G
Sbjct: 124 G 124
>gi|226507970|ref|NP_001140374.1| uncharacterized protein LOC100272427 [Zea mays]
gi|194699220|gb|ACF83694.1| unknown [Zea mays]
Length = 395
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 174 GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISDYI 233
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N+L GG D G ++
Sbjct: 234 --RYFL--HQHTIQLGQPATVKVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIF 286
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+ G+ + ++ GSGS+ + LD++ K +S+ EA V
Sbjct: 287 SVPLGGTILKQPFAIGGSGSSYLYALLDHEWKE-------------GMSQEEAEKFVVKV 333
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N DG+ R +
Sbjct: 334 VSLAMARDGASGGVVRTVTINADGVKRNF 362
>gi|365761090|gb|EHN02766.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841875|gb|EJT44194.1| PUP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 205
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+ G D A D R+ + +S + KI + +G DV
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L ++ + +Y+ + + + QL+S++LY +RF PY+ V+ G++++ GK +
Sbjct: 63 LNEMFRYKTNLYKLREERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIA 122
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L ++D +S+A
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LESEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + Y+++R+D
Sbjct: 171 -LLNAADRDALSGWGAAVYIIKKDKVVKRYLKMRQD 205
>gi|50540284|ref|NP_001002609.1| proteasome subunit beta type-2 [Danio rerio]
gi|49900459|gb|AAH75983.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Danio rerio]
Length = 199
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 18 CVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAAR 77
+ I G D+ + AAD ++ + DY K+ KL++K ++ G D + +
Sbjct: 4 LIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 78 HLIYQHQHNKQMSCPAMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
+Y+ ++ ++S A L Y + PY+ +L G D +Y D + +
Sbjct: 64 VQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSA 123
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
+ +++ G G+ L + LD + L+ EAVDL+K C +R
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYRP-------------DLTREEAVDLLKKCLEELNKR 170
Query: 196 DIYTANKLEIVVLNKDGIH 214
I + +++KDGIH
Sbjct: 171 FILNLPSFTVRLIDKDGIH 189
>gi|440636325|gb|ELR06244.1| proteasome component PUP3 [Geomyces destructans 20631-21]
Length = 205
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 16/217 (7%)
Query: 9 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVK 68
SP+ NGG CVA+ G D A D R+ +S ++ K+ D + +G DV
Sbjct: 3 SPFSINGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKVFNYGD-VYLGLTGLATDVA 61
Query: 69 ALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCV 127
+ L + +Y+ + + ++ L+S++LY KRF P++ V+ GLD G +
Sbjct: 62 TVSDLFRYKVNMYRLREERNIAPSTFANLVSSSLYEKRFGPFFVSPVVAGLDPKTGIPFI 121
Query: 128 YTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+D++G + + G+ S + + L P L +D +S+A
Sbjct: 122 CGFDSIGCIDFAKDFIVAGTASDQLFGTCEG-LWEPD---LEPEDLFETISQA------- 170
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 171 --LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 205
>gi|365759936|gb|EHN01692.1| Pre3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840755|gb|EJT43449.1| PRE3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 193
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 15/197 (7%)
Query: 19 VAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARH 78
+A+ D + AD+R +TG I +R K+ ++ DK SG AD +A+ ++
Sbjct: 1 MAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHL 60
Query: 79 LIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER 138
+Y Q+ + A L Y+ + ++ G D++ KG VYT GS +
Sbjct: 61 ELYTSQYGPPSTETAASVF--KELCYENKDNLTAGIIVAGYDDKNKGEVYTIPIGGSVHK 118
Query: 139 VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIY 198
+ Y+ GSGST I + D + +S+ E VD +K + A + D
Sbjct: 119 LPYAIAGSGSTFIYGYCDKNFRE-------------NMSKEETVDFIKHSLSQAIKWDGS 165
Query: 199 TANKLEIVVLNKDGIHR 215
+ + +VVL DG+ R
Sbjct: 166 SGGVIRMVVLTADGVER 182
>gi|195927408|pdb|3C91|H Chain H, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927409|pdb|3C91|I Chain I, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927410|pdb|3C91|J Chain J, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927411|pdb|3C91|K Chain K, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927412|pdb|3C91|L Chain L, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927413|pdb|3C91|M Chain M, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927414|pdb|3C91|N Chain N, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927422|pdb|3C91|V Chain V, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927423|pdb|3C91|W Chain W, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927424|pdb|3C91|X Chain X, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927425|pdb|3C91|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927426|pdb|3C91|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927427|pdb|3C91|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927428|pdb|3C91|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927436|pdb|3C92|H Chain H, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927437|pdb|3C92|I Chain I, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927438|pdb|3C92|J Chain J, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927439|pdb|3C92|K Chain K, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927440|pdb|3C92|L Chain L, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927441|pdb|3C92|M Chain M, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927442|pdb|3C92|N Chain N, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927450|pdb|3C92|V Chain V, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927451|pdb|3C92|W Chain W, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927452|pdb|3C92|X Chain X, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927453|pdb|3C92|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927454|pdb|3C92|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927455|pdb|3C92|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927456|pdb|3C92|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|262368054|pdb|3JRM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368055|pdb|3JRM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368056|pdb|3JRM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368057|pdb|3JRM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368058|pdb|3JRM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368059|pdb|3JRM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368060|pdb|3JRM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368080|pdb|3JSE|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368081|pdb|3JSE|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368082|pdb|3JSE|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368083|pdb|3JSE|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368084|pdb|3JSE|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368085|pdb|3JSE|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368086|pdb|3JSE|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368101|pdb|3JTL|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368102|pdb|3JTL|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368103|pdb|3JTL|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368104|pdb|3JTL|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368105|pdb|3JTL|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368106|pdb|3JTL|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368107|pdb|3JTL|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
Length = 203
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V I D + A + R++ I+ ++ K+ ++ M +G D + L + + A
Sbjct: 2 TTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKA 61
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
+Y+ Q M A+ LLSN L ++ PY ++GG+D V++ DA G
Sbjct: 62 ELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPH--VFSIDAAGGS 119
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
Y+S GSGS + L++Q ++ E VDLV ++A +RD
Sbjct: 120 VEDIYASTGSGSPFVYGVLESQYSE-------------KMTVDEGVDLVIRAISAAKQRD 166
Query: 197 IYTANKLEI-VVLNKDGIHREYMELRKD 223
+ +++ V+ KDG Y++L D
Sbjct: 167 SASGGMIDVAVITRKDG----YVQLPTD 190
>gi|452824977|gb|EME31976.1| proteasome beta subunit [Galdieria sulphuraria]
Length = 206
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+AG + AAD R + + D ++I K+ D+ ++ +G + DV L
Sbjct: 9 NGGCVLAMAGDNCVAIAADRRFGVQQTTIGTDTTRIFKINDRLMLGLTGLRTDVTTLYNR 68
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
R +Y+ + +++ + ++++TLY +RF PY+ V+ GL +G+ + D +
Sbjct: 69 FVQRLNLYRLREEREIKPASFANMVASTLYSRRFSPYFVEPVVAGLTEKGEPYLCAQDLL 128
Query: 134 GS 135
G+
Sbjct: 129 GA 130
>gi|12323391|gb|AAG51672.1|AC010704_16 putative 20S proteasome beta subunit PBC2; 7006-8626 [Arabidopsis
thaliana]
Length = 191
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G C AIA +D R+ ++ D+ +I K+ D + SG DV+ L + L
Sbjct: 3 GKNCFAIA--------SDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRL 54
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
RH +YQ + + M L+S LY KRF P+ V+ GL ++ K + T D++G
Sbjct: 55 VFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIG 114
Query: 135 SYE 137
+ E
Sbjct: 115 AKE 117
>gi|440904222|gb|ELR54761.1| Proteasome subunit beta type-3, partial [Bos grunniens mutus]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|21465651|pdb|1IRU|J Chain J, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465665|pdb|1IRU|X Chain X, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|565647|dbj|BAA05645.1| proteasome subunit HsC10-II [Homo sapiens]
gi|1091575|prf||2021261C proteasome:SUBUNIT=HsC10-II
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|225706352|gb|ACO09022.1| Proteasome subunit beta type 3 [Osmerus mordax]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMRGKQCVAVAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY KRF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYEKRFGPYYIEPVIAGLD 113
>gi|149054060|gb|EDM05877.1| rCG33987, isoform CRA_d [Rattus norvegicus]
Length = 202
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 4 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 64 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 123
Query: 133 VG 134
+G
Sbjct: 124 IG 125
>gi|395331331|gb|EJF63712.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 208
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+ +A+ G D A+D R+ +S ++ KI + ++ + G DV L++
Sbjct: 7 NGGSVIAMVGKDCVAIASDLRLGNQALGISSNFQKIFPMTNRIFLGLPGLATDVTTLKET 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
R ++ + +++ L+S+TLY +RF P++ V+ GL G Y +
Sbjct: 67 FRYRVNMFTIKEEREIEPETFAHLVSSTLYERRFGPWFIEPVMAGLQKTHDGSYKPY--I 124
Query: 134 GSYERVG-------YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVK 186
+ + +G + G+ ST + + L P L +D +S+
Sbjct: 125 AATDLIGCLNFAKDFVVAGTASTKLFGVAEG-LWEPD---LEPEDLFETISQ-------- 172
Query: 187 TCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD Y+ E+ VL KD + + ++ R D
Sbjct: 173 -TLLNAVDRDAYSGWGAEVYVLTKDKVIKRTLKGRMD 208
>gi|119719224|ref|YP_919719.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595702|sp|A1RWY6.1|PSB1_THEPD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119524344|gb|ABL77716.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 200
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G T V + G D+ V AAD R + GY I ++ KI+++ +G D + L
Sbjct: 11 KGTTTVGLVGKDFVVLAADRRATAGYFIANKQTWKIVEIDSHIAATIAGTVGDAQQLVDR 70
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL-GGLDNEGKGCVYTYDA 132
L Y+ M ++ L S L+ R P S +L GG+D++G +++ D
Sbjct: 71 LRVEARYYKTITGDSMPVKSVATLASLILFQYR--PILSVQMLIGGVDSDGP-SLFSVDW 127
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+G+ R Y++ GSGS + L+++ + LS EAV+L A
Sbjct: 128 LGTVTREKYTATGSGSPYAVSLLEHEYRE-------------DLSLEEAVNLAVKAVNIA 174
Query: 193 TERDIYTANKLEIVVLNKDGIH 214
RD + ++I + K+GI
Sbjct: 175 LARDPGSGEGVDIATITKEGIR 196
>gi|410917408|ref|XP_003972178.1| PREDICTED: proteasome subunit beta type-3-like [Takifugu rubripes]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD + + + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 133 VG-SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G E + G+ S + ++ L P + +D +S+A +
Sbjct: 127 IGCPMETEDFVVSGTCSEQMYGMCES-LWGPD---MEPEDLFETISQA---------MLN 173
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + + V+ KD I ++ R D
Sbjct: 174 AVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 205
>gi|393794893|ref|ZP_10378257.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 210
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V I D V AD R S GY I + + KI K+ + + +G AD + + +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDEHAGLTLAGGVADAQNIVDI 70
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L +++ + +S ++ +L S + R +P+ + ++GG D G ++ D
Sbjct: 71 LRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDANGP-ALFNIDMF 129
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E+ Y + GSGS + L+ + + L+ EA + +A
Sbjct: 130 GSVEKKSYVTTGSGSPVAYGLLEEEYRP-------------DLTVEEAKKIALRAVKAAI 176
Query: 194 ERDIYTANKLEIVVLNKDG 212
R+I T + + I V++KDG
Sbjct: 177 VRNIGTGDGINIAVMDKDG 195
>gi|308321183|gb|ADO27744.1| proteasome subunit beta type-3 [Ictalurus furcatus]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G D A+D R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>gi|147903930|ref|NP_001085540.1| proteasome (prosome, macropain) subunit, beta type, 2 [Xenopus
laevis]
gi|49119183|gb|AAH72908.1| MGC80364 protein [Xenopus laevis]
gi|77748113|gb|AAI06263.1| MGC80364 protein [Xenopus laevis]
Length = 199
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 19 VAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARH 78
+ I G D+ + AADT + + +D K+ K+++K ++ G D + +
Sbjct: 5 IGIQGNDFVLVAADTVCANSIIRMKQDVDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNV 64
Query: 79 LIYQHQHNKQMSCPAMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
+Y+ ++ ++S A L Y + PY+ +L G D +Y D + +
Sbjct: 65 QLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPSLYYMDYLAAL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+ +++ G G+ L + LD K L+ EAV+L+K C A +R
Sbjct: 125 AKTRFAAHGYGAYLTLSILDRYYKPD-------------LTREEAVELLKKCIAELQKRF 171
Query: 197 IYTANKLEIVVLNKDGIH 214
I + + V++KDGIH
Sbjct: 172 ILSLPSFTVRVIDKDGIH 189
>gi|410980899|ref|XP_003996811.1| PREDICTED: proteasome subunit beta type-3 [Felis catus]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|318102146|ref|NP_001188163.1| proteasome subunit beta type-3 [Ictalurus punctatus]
gi|308323613|gb|ADO28942.1| proteasome subunit beta type-3 [Ictalurus punctatus]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G D A+D R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>gi|224082072|ref|XP_002198635.1| PREDICTED: proteasome subunit beta type-2 [Taeniopygia guttata]
Length = 201
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 19 VAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARH 78
+ I G DY + AADT +T + D+ K+ K+++K ++ G D + +
Sbjct: 5 IGIQGPDYVLVAADTVAATSIIQMKHDHDKMFKMSEKILLLCVGEPGDTVQFAEYIQKNV 64
Query: 79 LIYQHQHNKQMSCPAMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
+Y+ ++ ++S A L Y + PY+ +L G D+ +Y D + +
Sbjct: 65 QLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDDHEGPALYYMDYLAAL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+ +++ G G+ L + LD K ++ EAVDL+K C +R
Sbjct: 125 AKTPFAAHGYGAFLTLSILDRYYKP-------------GITREEAVDLLKQCLEELKKRF 171
Query: 197 IYTANKLEIVVLNKDGIHR 215
I ++K+GIH
Sbjct: 172 ILNLTSFNARFIDKEGIHE 190
>gi|8394082|ref|NP_058981.1| proteasome subunit beta type-3 [Rattus norvegicus]
gi|730380|sp|P40112.1|PSB3_RAT RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|458731|dbj|BAA04824.1| proteasome subunit RC10-II [Rattus sp.]
gi|54261675|gb|AAH84723.1| Proteasome (prosome, macropain) subunit, beta type 3 [Rattus
norvegicus]
gi|149054057|gb|EDM05874.1| rCG33987, isoform CRA_a [Rattus norvegicus]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|77736139|ref|NP_001029768.1| proteasome subunit beta type-3 [Bos taurus]
gi|426237857|ref|XP_004012874.1| PREDICTED: proteasome subunit beta type-3 [Ovis aries]
gi|108935878|sp|P33672.3|PSB3_BOVIN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|74354224|gb|AAI02555.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|154426162|gb|AAI51436.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|296476492|tpg|DAA18607.1| TPA: proteasome subunit beta type-3 [Bos taurus]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|6755202|ref|NP_036101.1| proteasome subunit beta type-3 [Mus musculus]
gi|9910831|sp|Q9R1P1.1|PSB3_MOUSE RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|378792311|pdb|3UNB|I Chain I, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792325|pdb|3UNB|W Chain W, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792339|pdb|3UNB|KK Chain k, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792353|pdb|3UNB|YY Chain y, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792367|pdb|3UNE|I Chain I, Mouse Constitutive 20s Proteasome
gi|378792381|pdb|3UNE|W Chain W, Mouse Constitutive 20s Proteasome
gi|378792395|pdb|3UNE|KK Chain k, Mouse Constitutive 20s Proteasome
gi|378792409|pdb|3UNE|YY Chain y, Mouse Constitutive 20s Proteasome
gi|378792423|pdb|3UNF|I Chain I, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792437|pdb|3UNF|W Chain W, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792451|pdb|3UNH|I Chain I, Mouse 20s Immunoproteasome
gi|378792465|pdb|3UNH|W Chain W, Mouse 20s Immunoproteasome
gi|5757661|gb|AAD50537.1|AF060092_1 proteasome subunit C10-II [Mus musculus]
gi|12832232|dbj|BAB22017.1| unnamed protein product [Mus musculus]
gi|12845973|dbj|BAB26979.1| unnamed protein product [Mus musculus]
gi|15928628|gb|AAH14783.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|68085773|gb|AAH98233.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|74139857|dbj|BAE31772.1| unnamed protein product [Mus musculus]
gi|148684145|gb|EDL16092.1| mCG13231, isoform CRA_b [Mus musculus]
gi|444713978|gb|ELW54866.1| Proteasome subunit beta type-3 [Tupaia chinensis]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|291405921|ref|XP_002719377.1| PREDICTED: proteasome beta 3 subunit [Oryctolagus cuniculus]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTYKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|356461018|ref|NP_001239086.1| proteasome subunit beta type-3 [Canis lupus familiaris]
gi|354474809|ref|XP_003499622.1| PREDICTED: proteasome subunit beta type-3-like [Cricetulus griseus]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|22538465|ref|NP_002786.2| proteasome subunit beta type-3 [Homo sapiens]
gi|397477037|ref|XP_003809892.1| PREDICTED: proteasome subunit beta type-3 [Pan paniscus]
gi|20532411|sp|P49720.2|PSB3_HUMAN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|15278174|gb|AAH13008.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|119580935|gb|EAW60531.1| proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|261860656|dbj|BAI46850.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|410256642|gb|JAA16288.1| proteasome (prosome, macropain) subunit, beta type, 3 [Pan
troglodytes]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|355714019|gb|AES04862.1| proteasome subunit beta type 3 [Mustela putorius furo]
Length = 180
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|355568453|gb|EHH24734.1| Proteasome subunit beta type-3, partial [Macaca mulatta]
Length = 204
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 6 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 65
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 66 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 125
Query: 133 VG 134
+G
Sbjct: 126 IG 127
>gi|383873358|ref|NP_001244746.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|332258335|ref|XP_003278254.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Nomascus
leucogenys]
gi|402899980|ref|XP_003912961.1| PREDICTED: proteasome subunit beta type-3 [Papio anubis]
gi|403279415|ref|XP_003931246.1| PREDICTED: proteasome subunit beta type-3 [Saimiri boliviensis
boliviensis]
gi|355754088|gb|EHH58053.1| Proteasome subunit beta type-3 [Macaca fascicularis]
gi|380788351|gb|AFE66051.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|383414525|gb|AFH30476.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|384948330|gb|AFI37770.1| proteasome subunit beta type-3 [Macaca mulatta]
Length = 205
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|54696308|gb|AAV38526.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|60812279|gb|AAX36205.1| proteasome subunit beta type 3 [synthetic construct]
Length = 206
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|213407092|ref|XP_002174317.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
gi|212002364|gb|EEB08024.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T A+ + + AAD+R + G I +R K+ +L++K SG AD +A+ +L
Sbjct: 24 GTTITALRFQEGVILAADSRTTMGAYIANRVTDKLTQLSEKIWCCRSGSAADTQAVADIL 83
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
Y+ Q+ + + L S Y + + ++ G D E G VY+ G
Sbjct: 84 KYYLSQYRMQYGVEPTVQTAASLASEMCYQNKDYLTAGL-IIAGYDEETGGEVYSIPLGG 142
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S R + GSGS I F D K + + A+ +K A E
Sbjct: 143 SVHRQPLAIGGSGSAFIYGFCDANFKE-------------NMDKETAIQFLKNAVGLAME 189
Query: 195 RDIYTANKLEIVVLNKDGIHREYMEL 220
RD + + +V+L K GI R++ L
Sbjct: 190 RDRSSGGTIRMVILTKSGIERKFFAL 215
>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 210
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V I D V AD R S GY I + + KI K+ + +G AD + + +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDAHAGLTLAGGVADAQNIVDI 70
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L +++ + +S ++ +L S + R +P+ + ++GG D G ++ D
Sbjct: 71 LRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDANGP-ALFNIDMF 129
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E+ Y + GSGS + L+ + +S L+ EA + +A
Sbjct: 130 GSVEQKSYVTTGSGSPVAYGLLEEEYRS-------------DLTVEEAKKIALRAVKAAI 176
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRK 222
R+I T + + I V++KDG E +K
Sbjct: 177 VRNIGTGDGINIAVMDKDGFRLLTEEQKK 205
>gi|145513030|ref|XP_001442426.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409779|emb|CAK75029.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
+ + G D+ + A D ++ + KI+KL D + SG AD + +++
Sbjct: 3 SIFGLQGGDFVIVACDGSIAHSILKIKETEDKILKLDDHKIFGISGEGADRNSFGEIVHK 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYK----RFFPYYSFNVLGGLDNEGKGCVYTYDA 132
H + +++ M+ + ++Y + R P+ +LGG+D++G +Y D
Sbjct: 63 NHCLIRYKTGGYMNLQETAHFV-RSMYAQAIRSRDGPHQCNGLLGGVDSDGTPSLYWLDY 121
Query: 133 VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASA 192
+GS +++ +QG + ++ LDNQ K P+ L++ E ++++K C
Sbjct: 122 LGSLQKITRGAQGYANYFLLGLLDNQYK-PN------------LTKEEGIEIIKKCIKEL 168
Query: 193 TERDIYTANKLEIVVLNKDGI 213
R + NK + ++ K GI
Sbjct: 169 QTRFLIAQNKFIVKIVTKQGI 189
>gi|225705338|gb|ACO08515.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>gi|389860540|ref|YP_006362779.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525443|gb|AFK50641.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 206
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V + DY V AAD R + G + + KI K+ D M SG AD + L A
Sbjct: 8 TTVGLVVGDYVVLAADKRATGGPMVYHKRVKKIHKITDYAAMTISGLVADAQVLVD--EA 65
Query: 77 RHL--IYQHQHNKQMSCPAMGQLLSNTL-YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
R++ +Y+ + ++++ ++ +S L Y R+ P+ +LGG+D EG +Y D
Sbjct: 66 RYIARLYELDYGRRITLRSLSNYMSLILSAYLRYVPFIVQLLLGGVDEEGP-SLYYLDLY 124
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS + Y+S GSGS + L+ + + +S EA L +A
Sbjct: 125 GSISKEKYASTGSGSPVAYGVLEKEYRK-------------DMSLEEAKHLAFKAVEAAL 171
Query: 194 ERDIYTANKLEIVVLN 209
RD ++ +++VV+
Sbjct: 172 SRDGFSGEGVDVVVIG 187
>gi|387017850|gb|AFJ51043.1| Proteasome subunit beta type-3-like [Crotalus adamanteus]
Length = 205
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVATDFQKIFPMGDRLFIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ + ++SN LY +RF PYY+ V+ GL+
Sbjct: 67 LKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLN 113
>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
Length = 265
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+GG + + G + AAD R Y S ++ K+ +L + C++ G ADV+ + +
Sbjct: 9 SGGIAIGMCGKNCVALAADNRYGLRYQFASSNFHKVFQLNEHCLVGGCGVYADVQTVFEQ 68
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+ +Y+ + + + + ++ L+ KRF PYY ++ G D+ GK +YD +
Sbjct: 69 IKYDANLYKLREGRPIGPSQLVNATAHLLFSKRFNPYYMSPIIIGFDDNGKTYCSSYDYI 128
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G+ +++ G+G M D+ K + E V+ + C +
Sbjct: 129 GAPGDYRFAAVGTGCNEAMGVCDSFYKE-------------DMEPEELVETIGQCLLAGE 175
Query: 194 ERDIYTANKLEIVV 207
RD ++ +E+ +
Sbjct: 176 NRDAFSGWGVELPI 189
>gi|70606695|ref|YP_255565.1| proteasome beta subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066918|ref|YP_007434000.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449069190|ref|YP_007436271.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
gi|121725055|sp|Q4JAA8.1|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
639]
gi|449035426|gb|AGE70852.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449037698|gb|AGE73123.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
Length = 203
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AAD R S GY + + K++ + D + ++G AD LQ +
Sbjct: 10 GTTTVGIKVKDGVVLAADRRASAGYYVAHKYVRKVLYVTDNIGITTAGSVAD---LQFIY 66
Query: 75 AARHLIYQHQH---NKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
A IY ++ + L+N L ++FPY ++GG+D++ + +Y D
Sbjct: 67 EALKYIYHRNSITGEGPITVKGIATWLANVLSSSKYFPYLVQILIGGVDDQPR--LYNLD 124
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G Y++ GSGS + L++ K +S EA +L K S
Sbjct: 125 YLGDITEEEYTATGSGSPEALGVLEDNYKP-------------EMSLDEAAELAKRAIFS 171
Query: 192 ATERDIYTANKLEIVVLNKDGIHRE 216
+ +RD +T + + + K+G H E
Sbjct: 172 SIKRDSFTGTGVIVTKITKNG-HEE 195
>gi|351706755|gb|EHB09674.1| Proteasome subunit beta type-3 [Heterocephalus glaber]
Length = 217
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 19 NGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 78
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY +RF PYY+ V+ GLD + K + + D
Sbjct: 79 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLDL 138
Query: 133 VG 134
+G
Sbjct: 139 IG 140
>gi|300120261|emb|CBK19815.2| unnamed protein product [Blastocystis hominis]
Length = 205
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NG +A+ G + A+D R+ + + ++ KI K+ D+ + +G Q+D + +L
Sbjct: 8 NGAAVIAMKGKNCVAIASDLRLGAQFQTVDCNFQKIYKMTDQIFIGFNGLQSDAQTFAQL 67
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L Y+ + N+ +S A G L+ Y R+ PY+ V+ GLD G+ V D +
Sbjct: 68 LTYEVNSYKLRENRDISPEAFGSLVRTKQYQHRWGPYFVEPVIAGLDKNGEPYVNAMDTI 127
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G+ Y+ + + S L ++ +D + P E +++ C ++
Sbjct: 128 GAGI---YTPKFAISATCAESLYGTCEAFY------KDNMEP---EELFEVISQCLLASV 175
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+RD Y+ + ++ D I ++ R D
Sbjct: 176 DRDAYSGWGGIVYIITPDRIIERRLKTRMD 205
>gi|448609025|ref|ZP_21660304.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
gi|445747402|gb|ELZ98858.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
Length = 243
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I + V A D R S G + S+D K+ ++ + +G + ++L L
Sbjct: 49 GTTTVGIKTDEGVVLATDMRASLGPMVSSKDVQKVEEVHPTGALTIAGSVSAAQSLISSL 108
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
A +Y+ + + MS A+ L+ N L F Y +LGG+D++G +Y+ D G
Sbjct: 109 RAEVRLYESRRGEDMSMQALSTLVGNFLRTGGF--YIVQPILGGVDDDGA-HIYSIDPAG 165
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S Y+ GSGS + L+ + LS EA + SA E
Sbjct: 166 SILEEEYTVTGSGSQYALGVLEQEFSD-------------DLSIDEAKQVATKAIRSAVE 212
Query: 195 RDIYTANKLEIVVLNKDGI 213
RD+ + N + I V+ +G+
Sbjct: 213 RDLASGNGINIAVVTDEGV 231
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + D V A D R + G I ++ K+ K+ D M +G D ++L +LL
Sbjct: 14 GTTTVGLICEDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLL 73
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+A IY+ + M+ + L SN L+ R +P + ++GG D +++ D VG
Sbjct: 74 SAEAKIYKMRTGNNMTPLSCTTLTSNVLHGNRHYPLLTQLIIGGYDLINGPKLFSLDPVG 133
Query: 135 SY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
E +++ GSGS L+ + KS ++ + + + SA
Sbjct: 134 GINEESSFTATGSGSPTAYGVLEAEYKS-------------EINIEKGLLIAVKALISAM 180
Query: 194 ERDIYTANKLEIVVLNKDGI 213
+RD Y+ N + + ++K G+
Sbjct: 181 QRDAYSGNGISLAKIDKTGV 200
>gi|195421053|ref|XP_002060833.1| GK20618 [Drosophila willistoni]
gi|194156918|gb|EDW71819.1| GK20618 [Drosophila willistoni]
Length = 173
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Query: 44 RDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP-AMGQLLSNTL 102
R SK+ ++ + V+ S G D AL L+ + L Y+ N CP ++ +L+ T
Sbjct: 2 RSQSKLFDVSPQTVLGSVGCWCDTLALLSLVRSYSLKYELD-NLMPVCPDSLASMLTRT- 59
Query: 103 YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD------ 156
K Y+ +V+ G+D+ G G VY G+Y R+ Y G+G +I+P LD
Sbjct: 60 --KFTLQYFVSSVVAGIDSNGLGAVYFNHPSGNYLRLPYHISGTGGRIILPTLDWFEGNE 117
Query: 157 -NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLEIVVLNKDGIHR 215
+Q+ + T L+ +AV++ F +A +RDI+ N + I ++ ++G+
Sbjct: 118 EDQMNA----------ITTSLTVDKAVEISMEAFRTARDRDIFIGNCMFINIITREGVQF 167
Query: 216 EYMEL 220
+ + L
Sbjct: 168 KQLPL 172
>gi|198423327|ref|XP_002125759.1| PREDICTED: similar to LOC496005 protein [Ciona intestinalis]
Length = 205
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG VA+ G + A+D R + D+ KI ++++ + +G DV+ + +
Sbjct: 7 NGGAVVAMKGKNCVAIASDLRFGIQAQTVGMDFEKIFPMSERLYIGLTGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 124
L + +Y+ + N+Q+S ++SN LY KRF PY+ V+ GLD + K
Sbjct: 67 LQFQLKLYELRENRQISPKTFLSVVSNLLYEKRFGPYFIEPVIAGLDPKTK 117
>gi|242094606|ref|XP_002437793.1| hypothetical protein SORBIDRAFT_10g002700 [Sorghum bicolor]
gi|241916016|gb|EER89160.1| hypothetical protein SORBIDRAFT_10g002700 [Sorghum bicolor]
Length = 245
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + + AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 24 GTTIVGVCYDGGVILGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISDYV 83
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N+L GG D G ++
Sbjct: 84 --RYFL--HQHTIQLGQPATVKVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIF 136
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+ G+ + ++ GSGS+ + LD++ K +S+ EA V
Sbjct: 137 SVPLGGTILKQPFAIGGSGSSYLYALLDHEWKE-------------GMSQEEAEKFVVKV 183
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N DG+ R +
Sbjct: 184 VSLAMARDGASGGVVRTVTINADGVKRNF 212
>gi|197632283|gb|ACH70865.1| proteasome (prosome, macropain) subunit, beta type 3 [Salmo salar]
gi|209735862|gb|ACI68800.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>gi|148229244|ref|NP_001088741.1| proteasome (prosome, macropain) subunit, beta type, 3 [Xenopus
laevis]
gi|56270462|gb|AAH87395.1| LOC496005 protein [Xenopus laevis]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G D AAD R +++ D+ KI + ++ + +G DV+ + +
Sbjct: 7 NGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ +++N LY +RF PYY V+ GLD + + + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPFICSLDL 126
Query: 133 VG-SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G E + G+ S + ++ L P + +D +S+A +
Sbjct: 127 IGCPMETEDFVVSGTCSEQMYGMCES-LWEPD---MEPEDLFETISQA---------MLN 173
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
A +RD + + + V+ KD I ++ R D
Sbjct: 174 AVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 205
>gi|312378864|gb|EFR25317.1| hypothetical protein AND_09469 [Anopheles darlingi]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG VA+ G + A D R ++ D+ K+ ++ + G Q D+ + +
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDILTVYQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + N+QM+ +LSN LY KRF PY+ V+ GLD
Sbjct: 67 LIFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLD 113
>gi|209737458|gb|ACI69598.1| Proteasome subunit beta type-3 [Salmo salar]
gi|303661230|gb|ADM16027.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>gi|345801204|ref|XP_003434786.1| PREDICTED: proteasome subunit beta type-1-like [Canis lupus
familiaris]
Length = 112
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 123 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 182
G VY++ VGSY+R + + GS S ++ LDNQ+ + + + V LS A+
Sbjct: 9 GNMAVYSFGPVGSYQRDSFKAGGSASAMLQLLLDNQVGFKN---MQNVEHVL-LSLDRAM 64
Query: 183 DLVKTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
LVK F SA ERD+YT + L I ++ K+GI E + LRKD
Sbjct: 65 RLVKDVFISAAERDVYTGDVLRICIVTKEGIREETVPLRKD 105
>gi|225703360|gb|ACO07526.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQVVTTDFQKIFPMGDRLHIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>gi|417397057|gb|JAA45562.1| Putative proteasome subunit beta type-3 [Desmodus rotundus]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G D AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKDCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + + + + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRPIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|348519415|ref|XP_003447226.1| PREDICTED: proteasome subunit beta type-2-like [Oreochromis
niloticus]
Length = 199
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 15/199 (7%)
Query: 18 CVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAAR 77
+ I G D+ + AAD ++ + DY K+ KL++K ++ G D + +
Sbjct: 4 LIGIQGQDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 78 HLIYQHQHNKQMSCPAMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
+Y+ ++ ++S A L Y + PY+ +L G D+ +Y D + S
Sbjct: 64 VQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDDTDGPGLYYMDHLSS 123
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
+ +++ G G+ L + LD + LS EAVDL+K C +R
Sbjct: 124 LAKAPFAAHGYGAYLTLSILDRYYRP-------------DLSRDEAVDLLKKCVEELKKR 170
Query: 196 DIYTANKLEIVVLNKDGIH 214
I + +++K+GIH
Sbjct: 171 FILNLPSFTVRLIDKEGIH 189
>gi|302595920|sp|A0RXV1.2|PSB2_CENSY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 210
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V I D V AD R S GY I + + KI ++ D + +G AD + + +
Sbjct: 11 HGTTTVGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQNIVDV 70
Query: 74 LAARHLIYQHQHNKQMSCP--AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
L R+ H+ KQ P ++ +L S + R +P+ + ++GG D G +Y D
Sbjct: 71 L--RYHASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMGGFDAVGP-ALYNID 127
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
GS E Y + GSGS + L+ + ++ L+ EA + +
Sbjct: 128 MFGSVEEKSYVTTGSGSPVAYGTLEEEYRA-------------DLTADEAKGVALRAVKA 174
Query: 192 ATERDIYTANKLEIVVLNKDGIHREYMELRK 222
A R+I T + + + V+N +G E +K
Sbjct: 175 AITRNIGTGDGINVAVINGNGFELLTREQKK 205
>gi|229582084|ref|YP_002840483.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|302595759|sp|C3NHF1.1|PSB2_SULIN RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|228012800|gb|ACP48561.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
Length = 211
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AAD R S G+ + ++ K++ + DK + ++G AD++ + +L
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 AARHLIYQHQHNKQ---MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
IY + + + +S + L+N L ++FPY ++GG D++ + ++ D
Sbjct: 77 KN---IYHYNNITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQPR--LFNLD 131
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G Y + GSGS + M L+++ L EA DL K S
Sbjct: 132 YLGDITEENYVATGSGSPVAMGVLEDEYNPKMTL-------------DEAADLAKRAVFS 178
Query: 192 ATERDIYTANKLEIVVLNKDGIHRE 216
A +RD +T + + ++ G H E
Sbjct: 179 AIKRDSFTGTGVIVAKIHSKG-HEE 202
>gi|185133100|ref|NP_001117722.1| proteasome subunit beta type-3 [Oncorhynchus mykiss]
gi|6093786|sp|O73817.1|PSB3_ONCMY RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|3063687|gb|AAC14141.1| proteasome subunit C10-11 [Oncorhynchus mykiss]
gi|225705904|gb|ACO08798.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>gi|242079721|ref|XP_002444629.1| hypothetical protein SORBIDRAFT_07g025030 [Sorghum bicolor]
gi|241940979|gb|EES14124.1| hypothetical protein SORBIDRAFT_07g025030 [Sorghum bicolor]
Length = 245
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + + AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 24 GTTIVGVCYDGGVILGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISDYV 83
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N+L GG D G ++
Sbjct: 84 --RYFL--HQHTIQLGQPATVKVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIF 136
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
+ G+ + ++ GSGS+ + LD++ K +S+ EA V
Sbjct: 137 SVPLGGTILKQPFAIGGSGSSYLYALLDHEWKE-------------GMSQEEAEKFVVKV 183
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N DG+ R +
Sbjct: 184 VSLAMARDGASGGVVRTVTINADGVKRNF 212
>gi|225705836|gb|ACO08764.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGQQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>gi|388852079|emb|CCF54255.1| probable PUP3-20S proteasome subunit beta3 [Ustilago hordei]
Length = 204
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 65/121 (53%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+ VA G + V A+D R+ ++ ++ K+ ++ +K + G +DV L++
Sbjct: 7 NGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYIGLPGLASDVTTLREK 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
R +Y+ + + + QL+S+TLY +RF PY+ V+ G++++ + + D V
Sbjct: 67 FRYRVNMYKMKEERDIEPEVFAQLVSSTLYERRFGPYFIEPVIAGINSKNEPFIAASDVV 126
Query: 134 G 134
G
Sbjct: 127 G 127
>gi|390349452|ref|XP_003727222.1| PREDICTED: proteasome subunit beta type-2-like [Strongylocentrotus
purpuratus]
Length = 201
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 19 VAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARH 78
+ I G DY + A+D + D K+ L+ K +M +G D + +
Sbjct: 5 LGIQGPDYVLLASDMNAGRSVFVFKHDQEKMFPLSSKLLMLCAGESGDTVQFAEYIQKNI 64
Query: 79 LIYQHQHNKQMSCPAMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
+Y+ ++ ++S A L + + PY +L G D C++ D +GS
Sbjct: 65 QLYKIRNGYELSPKAAANFTRKNLADFLRSKTPYQVNLLLAGHDETDGPCLFYMDYLGSL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
++V +++ G GS + LD + ++ +AV+++K C +R
Sbjct: 125 QQVPFAAHGYGSYFTLSILDRHYRR-------------DMTRDQAVEVLKKCLLEVQKRF 171
Query: 197 IYTANKLEIVVLNKDGIH 214
I +I +++KDGIH
Sbjct: 172 IVNLPTFQIRIVDKDGIH 189
>gi|367011527|ref|XP_003680264.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
gi|359747923|emb|CCE91053.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+AG D A+D R+ + +S + KI + +G DV
Sbjct: 4 PSSINGGIVVAMAGKDCVAIASDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVY 128
L + + +Y+ + ++ + QL+S+TLY +RF PY+ V+ G++++ K +
Sbjct: 63 LSETFRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTEKPFIA 122
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L A+D +S+A
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEAEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + Y++ R+D
Sbjct: 171 -LLNAADRDALSGWGAVVYIIKKDKVVKRYLKTRQD 205
>gi|209733400|gb|ACI67569.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>gi|392299798|gb|EIW10890.1| Pup3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+ G D A D R+ + +S + KI + +G DV
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L ++ + +Y+ + + + QL+S++LY +RF PY+ V+ G++++ GK +
Sbjct: 63 LNEMFRYKTNLYKLKEERTIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIA 122
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L +D +S+A
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEPEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + Y+++R+D
Sbjct: 171 -LLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 205
>gi|348562309|ref|XP_003466953.1| PREDICTED: proteasome subunit beta type-3-like [Cavia porcellus]
Length = 202
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 4 NGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ + +++N LY +RF PYY+ V+ GLD
Sbjct: 64 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLD 110
>gi|224118628|ref|XP_002331409.1| predicted protein [Populus trichocarpa]
gi|118484942|gb|ABK94336.1| unknown [Populus trichocarpa]
gi|222873623|gb|EEF10754.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI +L D + SG AD + + +
Sbjct: 16 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 75
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N ++GG D G +Y
Sbjct: 76 --RYFL--HQHTIQLGQPATVKVAANLV---RMLSYNNKNFLQTGMIVGGWDKYEGGKIY 128
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
G+ + ++ GSGS+ + F D K D +T + EA LV
Sbjct: 129 GVPLGGTLLELPFTIGGSGSSYLYGFFDQAWK----------DGMT---QEEAEQLVVKA 175
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N +G+ R+Y
Sbjct: 176 VSLAIARDGASGGVVRTVTINSEGVSRKY 204
>gi|398364611|ref|NP_011020.3| proteasome core particle subunit beta 3 [Saccharomyces cerevisiae
S288c]
gi|141337|sp|P25451.1|PSB3_YEAST RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Macropain subunit PUP3; AltName:
Full=Multicatalytic endopeptidase complex subunit PUP3;
AltName: Full=Proteasome component PUP3
gi|11514000|pdb|1G0U|I Chain I, A Gated Channel Into The Proteasome Core Particle
gi|11514014|pdb|1G0U|W Chain W, A Gated Channel Into The Proteasome Core Particle
gi|14488814|pdb|1FNT|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488828|pdb|1FNT|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765708|pdb|1Z7Q|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765722|pdb|1Z7Q|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|178847468|pdb|2ZCY|I Chain I, Yeast 20s Proteasome:syringolin A-Complex
gi|178847482|pdb|2ZCY|W Chain W, Yeast 20s Proteasome:syringolin A-Complex
gi|178847510|pdb|3BDM|I Chain I, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847524|pdb|3BDM|W Chain W, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462944|pdb|3NZJ|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462958|pdb|3NZJ|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462972|pdb|3NZW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462986|pdb|3NZW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463000|pdb|3NZX|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463014|pdb|3NZX|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361180|pdb|3MG6|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361194|pdb|3MG6|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361208|pdb|3MG7|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361222|pdb|3MG7|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361236|pdb|3MG8|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361250|pdb|3MG8|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|378792249|pdb|3UN4|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792263|pdb|3UN4|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792283|pdb|3UN8|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792297|pdb|3UN8|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|403071956|pdb|4B4T|3 Chain 3, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|403072200|pdb|4G4S|J Chain J, Structure Of Proteasome-Pba1-Pba2 Complex
gi|444302347|pdb|4INR|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302361|pdb|4INR|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302375|pdb|4INT|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302389|pdb|4INT|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302403|pdb|4INU|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302417|pdb|4INU|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|172337|gb|AAA34946.1| ORF1 [Saccharomyces cerevisiae]
gi|603332|gb|AAB64649.1| Pup3p [Saccharomyces cerevisiae]
gi|151944812|gb|EDN63071.1| 20S proteasome subunit beta3_sc [Saccharomyces cerevisiae YJM789]
gi|190405659|gb|EDV08926.1| proteasome component PUP3 [Saccharomyces cerevisiae RM11-1a]
gi|256271461|gb|EEU06515.1| Pup3p [Saccharomyces cerevisiae JAY291]
gi|259146019|emb|CAY79279.1| Pup3p [Saccharomyces cerevisiae EC1118]
gi|285811728|tpg|DAA07756.1| TPA: proteasome core particle subunit beta 3 [Saccharomyces
cerevisiae S288c]
gi|323305263|gb|EGA59010.1| Pup3p [Saccharomyces cerevisiae FostersB]
gi|323333773|gb|EGA75164.1| Pup3p [Saccharomyces cerevisiae AWRI796]
gi|323337981|gb|EGA79220.1| Pup3p [Saccharomyces cerevisiae Vin13]
gi|323355291|gb|EGA87116.1| Pup3p [Saccharomyces cerevisiae VL3]
gi|349577761|dbj|GAA22929.1| K7_Pup3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766114|gb|EHN07615.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+ G D A D R+ + +S + KI + +G DV
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L ++ + +Y+ + + + QL+S++LY +RF PY+ V+ G++++ GK +
Sbjct: 63 LNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIA 122
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L +D +S+A
Sbjct: 123 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEPEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + Y+++R+D
Sbjct: 171 -LLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 205
>gi|255712483|ref|XP_002552524.1| KLTH0C06886p [Lachancea thermotolerans]
gi|238933903|emb|CAR22086.1| KLTH0C06886p [Lachancea thermotolerans CBS 6340]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+ G D A D R+ + ++ ++ KI + +G DV
Sbjct: 4 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVANNFEKIFHYG-HVFLGLTGLATDVTT 62
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L + + +Y+ + ++ + QL+S+TLY KRF PY++ V+ G+++ GK +
Sbjct: 63 LSETFRYKTNMYKLKEDRFIEPETFTQLVSSTLYEKRFGPYFTGPVVAGINSRTGKPYIS 122
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L +D +S+A
Sbjct: 123 GFDLIGCIDEAKDFVVSGTASEQLFGMCES-LYEPN---LEPEDLFETISQA-------- 170
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + Y++ R+D
Sbjct: 171 -LLNAADRDALSGWGAAVYIIKKDKVIKRYLKTRQD 205
>gi|387017848|gb|AFJ51042.1| Proteasome subunit beta type-2-like [Crotalus adamanteus]
Length = 201
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 19 VAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARH 78
+ I G D+ + AADT ++ + RD+ K+ K+++K ++ G D + +
Sbjct: 5 IGIQGPDFVLMAADTVAASSIVHMKRDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNV 64
Query: 79 LIYQHQHNKQMSCPAMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
+Y+ ++ ++S A L Y + PY+ +L G D +Y D + S
Sbjct: 65 QLYKMRNGYELSPTAAANFTRRNLADYLRSRSPYHVNLLLAGYDEHDGPALYYMDYLASL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+V +++ G G+ L + LD K P ++ EA++++K C +R
Sbjct: 125 AKVPFAAHGYGAFLTLSILDRYYK-------PG------ITREEAIEVLKKCLEELQKRF 171
Query: 197 IYTANKLEIVVLNKDGIH 214
I ++KDGIH
Sbjct: 172 ILNLPSFNARFIDKDGIH 189
>gi|348521013|ref|XP_003448021.1| PREDICTED: proteasome subunit beta type-3-like [Oreochromis
niloticus]
Length = 202
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 4 NGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD
Sbjct: 64 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 110
>gi|222136592|ref|NP_001138374.1| proteasome subunit beta type-3 [Sus scrofa]
Length = 205
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY +RF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|91694273|gb|ABE41788.1| 20S proteasome subunit [Trichoderma harzianum]
Length = 261
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G + + I D V AAD S G D ++ AD ++ GF D+ +Q L
Sbjct: 40 GTSVIGIKFKDGVVMAADNLASYGSLARFTDVKRLRTFADSSIV---GFSGDISDMQYL- 95
Query: 75 AARHLI-------YQHQHNKQMSCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKG 125
RHLI Y+ +++ + + LS LY +R F P ++ ++GGLD+ G+
Sbjct: 96 -DRHLIDLSLSEAYESPDKPRLNAANLHRYLSKLLYNRRSKFDPLWNHLLIGGLDDNGEP 154
Query: 126 CVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 185
+ D +GS + G G+ L P + +P +++ LS EA+++V
Sbjct: 155 FLAAADLLGSTYSAPSLATGFGAMLAQPIMRR--------YVPDEESAKKLSREEAINIV 206
Query: 186 KTCFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
K RD + + + V+ K+G+ EL++D
Sbjct: 207 KEAMKVLFYRDARSLDSYSLAVVTKEGV-----ELKQD 239
>gi|301762874|ref|XP_002916854.1| PREDICTED: proteasome subunit beta type-3-like [Ailuropoda
melanoleuca]
Length = 202
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 4 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY +RF PYY+ V+ GLD + K + + D
Sbjct: 64 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLDL 123
Query: 133 VG 134
+G
Sbjct: 124 IG 125
>gi|432328820|ref|YP_007246964.1| proteasome endopeptidase complex, archaeal, beta subunit
[Aciduliprofundum sp. MAR08-339]
gi|432135529|gb|AGB04798.1| proteasome endopeptidase complex, archaeal, beta subunit
[Aciduliprofundum sp. MAR08-339]
Length = 225
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 25 DYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ 84
D V + R S I + K+ +L M ++G D++ L + + A +Y+ +
Sbjct: 32 DGVVLGTEHRASMETFIAHKTAQKLYRLDYNIGMTTAGLVGDLQVLVRYMRAEINLYRIR 91
Query: 85 HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQ 144
M A LLSN L ++FFPYY ++GG D+ G VY DA G Y+S
Sbjct: 92 RKMYMPVGAAATLLSNILNERKFFPYYVGLLVGGFDDRGY-HVYAIDAAGGAIEDKYASV 150
Query: 145 GSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTANKLE 204
GSGS + L+++ L E ++LV +A RD + + +
Sbjct: 151 GSGSLFVYGVLEDRWHDDIGL-------------DEGIELVIRGINAAMRRDAASGDGIS 197
Query: 205 IVVLNKDGIHREYMEL 220
+ + K+ R ++EL
Sbjct: 198 VATITKE---RGFVEL 210
>gi|323451149|gb|EGB07027.1| hypothetical protein AURANDRAFT_60167 [Aureococcus anophagefferens]
Length = 201
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 14/199 (7%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T + + G Y + AD + +D KI+KL D ++ SG AD A + +
Sbjct: 3 TTIGLLGNGYAIVCADQNAARSIVCFKKDEDKIMKLDDFKLLGQSGVGADNVAFTEYVQK 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLYYK-RFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 135
+Y+ + +S A + L R PY + +LGG D +Y D + S
Sbjct: 63 NVALYKINNGLSLSTKATNNFIRGDLATALRKGPYQTNLLLGGFDKGVGASLYYIDYMAS 122
Query: 136 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 195
+V + G GS ++ LD ++ L EA +D++ C A R
Sbjct: 123 SNKVNFGCHGYGSNFVLSILD-------------REWTEGLDEAAGLDIINKCIAELQTR 169
Query: 196 DIYTANKLEIVVLNKDGIH 214
+ K I +++KDGI
Sbjct: 170 FLIHMPKFLIKIVDKDGIR 188
>gi|3114278|pdb|1RYP|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114292|pdb|1RYP|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513421|pdb|1G65|I Chain I, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513435|pdb|1G65|W Chain W, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|20150385|pdb|1JD2|I Chain I, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150392|pdb|1JD2|P Chain P, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279376|pdb|2F16|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279390|pdb|2F16|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032210|pdb|2FAK|I Chain I, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032224|pdb|2FAK|W Chain W, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490851|pdb|2GPL|I Chain I, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490865|pdb|2GPL|W Chain W, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016375|pdb|3D29|I Chain I, Proteasome Inhibition By Fellutamide B
gi|190016389|pdb|3D29|W Chain W, Proteasome Inhibition By Fellutamide B
gi|197725329|pdb|3E47|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725343|pdb|3E47|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939220|pdb|3DY3|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939234|pdb|3DY3|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939248|pdb|3DY4|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939262|pdb|3DY4|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828245|pdb|3GPJ|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828259|pdb|3GPJ|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588329|pdb|3GPT|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588343|pdb|3GPT|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588357|pdb|3GPW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588371|pdb|3GPW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588551|pdb|3HYE|I Chain I, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588565|pdb|3HYE|W Chain W, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508231|pdb|1VSY|J Chain J, Proteasome Activator Complex
gi|298508245|pdb|1VSY|X Chain X, Proteasome Activator Complex
gi|298508447|pdb|3L5Q|N Chain N, Proteasome Activator Complex
gi|298508461|pdb|3L5Q|Z Chain Z, Proteasome Activator Complex
gi|330689389|pdb|3MG4|I Chain I, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689403|pdb|3MG4|W Chain W, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361152|pdb|3MG0|I Chain I, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361166|pdb|3MG0|W Chain W, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892349|pdb|3OKJ|I Chain I, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892363|pdb|3OKJ|W Chain W, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780427|pdb|3OEU|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780441|pdb|3OEU|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780455|pdb|3OEV|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780469|pdb|3OEV|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610680|pdb|3TDD|I Chain I, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610694|pdb|3TDD|W Chain W, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545854|pdb|3SHJ|I Chain I, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545868|pdb|3SHJ|W Chain W, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|390980824|pdb|3SDI|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980838|pdb|3SDI|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980852|pdb|3SDK|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980866|pdb|3SDK|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550740|pdb|4GK7|I Chain I, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550754|pdb|4GK7|W Chain W, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|409973868|pdb|4FZC|I Chain I, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973882|pdb|4FZC|W Chain W, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973896|pdb|4FZG|I Chain I, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973910|pdb|4FZG|W Chain W, 20s Yeast Proteasome In Complex With Glidobactin
Length = 204
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P NGG VA+ G D A D R+ + +S + KI + +G DV
Sbjct: 3 PSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTT 61
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVY 128
L ++ + +Y+ + + + QL+S++LY +RF PY+ V+ G++++ GK +
Sbjct: 62 LNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIA 121
Query: 129 TYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D +G E + G+ S + ++ L P+ L +D +S+A
Sbjct: 122 GFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEPEDLFETISQA-------- 169
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + Y+++R+D
Sbjct: 170 -LLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 204
>gi|58395630|ref|XP_321394.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|347966404|ref|XP_003435908.1| AGAP001697-PB [Anopheles gambiae str. PEST]
gi|55233656|gb|EAA00889.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|333470074|gb|EGK97505.1| AGAP001697-PB [Anopheles gambiae str. PEST]
Length = 205
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG VA+ G + A D R ++ D+ K+ ++ + G Q D+ + +
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDILTVYQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + N+QM+ +LSN LY KRF PY+ V+ GLD
Sbjct: 67 LLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLD 113
>gi|68489003|ref|XP_711658.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
gi|46432977|gb|EAK92436.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
Length = 206
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 10 PYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKA 69
P+ NGG VA+ G +D R+ +S ++ KI + DK + +G DV +
Sbjct: 4 PFSINGGAAVAMIGKGCIAIGSDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVIS 63
Query: 70 LQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDN-EGKGCVY 128
L++L + +Y+ + + + + L+S++LY +RF P++ ++ GL + + K +
Sbjct: 64 LKELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFIC 123
Query: 129 TYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT 187
+D++G + + G+ S + ++ L P+ L +D +S+A
Sbjct: 124 GFDSIGCIDFSHDFIVSGTASDQLYGMCES-LYEPN---LEPEDLFETISQA-------- 171
Query: 188 CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+A +RD + + ++ KD + + ++ R+D
Sbjct: 172 -LLNAVDRDALSGWGAVVYIVTKDKVIKRVLKTRQD 206
>gi|386875364|ref|ZP_10117538.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386806763|gb|EIJ66208.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 210
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V I D V AD R S GY I + + KI K+ + +G AD + + +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDLHAGLTLAGGVADAQNIVDI 70
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L +++ + +S ++ +L S + R +P+ + ++GG D G ++ D
Sbjct: 71 LRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGFDANGP-ALFNIDMF 129
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E Y + GSGS + L+ + K L+ EA + +A
Sbjct: 130 GSVEEKSYVTTGSGSPVAYGLLEEEYKK-------------DLTVEEAKKIALRAVKAAI 176
Query: 194 ERDIYTANKLEIVVLNKDG 212
R+I T + + I V++KDG
Sbjct: 177 VRNIGTGDGINIAVMDKDG 195
>gi|326934090|ref|XP_003213128.1| PREDICTED: proteasome subunit beta type-3-like [Meleagris
gallopavo]
Length = 205
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + ++ + +G DV+ + +
Sbjct: 7 NGGAVMAMRGKNCVAIAADRRFGIQAQMITTDFQKIFPMGERLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 120
L R +Y+ + +Q+ ++SN LY +RF PYY+ V+ GLD
Sbjct: 67 LKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLD 113
>gi|443717932|gb|ELU08769.1| hypothetical protein CAPTEDRAFT_228896 [Capitella teleta]
Length = 205
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NG VA+AG D AAD R ++ D+ KI + M G DV+ + +
Sbjct: 7 NGSAIVAMAGKDCVAIAADRRFGIQGQTVALDFQKIYEYGPNLYMGLPGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCVYTYDA 132
L R +Y+ + N++M M ++SN LY +RF PY+ V+ GLD K + + D
Sbjct: 67 LKFRVNMYELRENRKMKPQTMLSVVSNLLYERRFGPYFVEPVIAGLDPKTSKPFIASLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|3114276|pdb|1RYP|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114290|pdb|1RYP|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
Length = 205
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G + +A+ D + AD+R +TG I +R K+ ++ DK SG AD +A+ ++
Sbjct: 9 GASIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIV 68
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+Y Q+ + A L Y+ + ++ G D++ KG VYT G
Sbjct: 69 QYHLELYTSQYGTPSTETAASVF--KELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGG 126
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S ++ Y+ GSGST I + D + +S+ E VD +K + A +
Sbjct: 127 SVHKLPYAIAGSGSTFIYGYCDKNFRE-------------NMSKEETVDFIKHSLSQAIK 173
Query: 195 RDIYTANKLEIVVLNKDGIHR 215
D + + +VVL G+ R
Sbjct: 174 WDGSSGGVIRMVVLTAAGVER 194
>gi|281344355|gb|EFB19939.1| hypothetical protein PANDA_004975 [Ailuropoda melanoleuca]
Length = 190
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY +RF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|407465690|ref|YP_006776572.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407048878|gb|AFS83630.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 210
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
+G T V I D V AD R S GY I + + KI ++ + +G AD + + +
Sbjct: 11 HGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQQIDQHAGLTLAGGVADAQNIVDI 70
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L +++ + +S ++ +L S + R +P+ + +LGG D G ++ D
Sbjct: 71 LRYHSNLHRVEKQNSISIHSLARLCSLIFHQNRGYPFMADILLGGYDANGP-SLFNVDMF 129
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
GS E Y + GSGS + L+ + K L+ EA + +A
Sbjct: 130 GSVEEKSYVTTGSGSPVAYGLLEEEYKE-------------DLTIEEAKQVALRAVKAAI 176
Query: 194 ERDIYTANKLEIVVLNKDG 212
R+I T + + I +++KDG
Sbjct: 177 VRNIGTGDGINIAIMDKDG 195
>gi|195165880|ref|XP_002023766.1| GL27233 [Drosophila persimilis]
gi|194105926|gb|EDW27969.1| GL27233 [Drosophila persimilis]
Length = 208
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T +AI G D+ + +ADT + G +L + SKI +L D ++A++G D + L+A
Sbjct: 3 TILAIKGKDFVLISADTVVGKGLIVLGQGKSKIERLGDFAMIAAAGNGGDPQRFMSLIAR 62
Query: 77 RHLIYQHQHNKQM-SCPAMGQLLSNTLY--YKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
+++ QHN Q S +M +Y + ++ G D + ++ D
Sbjct: 63 HMALHRVQHNGQSPSVRSMAHFAGKQIYSSVNANLNFKVSALIAGWDPQAGPQLHQIDEF 122
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
G V YS QG G +P ++ + +D + E A ++K C A+
Sbjct: 123 GGLVSVPYSGQGLG----LPVFNSIFQ---------KDYSPDIDEPTAYHVLKKCVAAVH 169
Query: 194 ERDIYTANKLEIVVLNKDGI 213
ER + E+ V+ +GI
Sbjct: 170 ERVVLNMRNFEVFVVKANGI 189
>gi|268554105|ref|XP_002635040.1| C. briggsae CBR-PBS-1 protein [Caenorhabditis briggsae]
Length = 242
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 13 NNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQK 72
+ G T +A+ V D+R S G I SR +KI + D V+ SG AD +A+
Sbjct: 24 STGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIAD 83
Query: 73 LLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL-GGLDNEGKGCVYTYD 131
+ +Y NK ++ Q+ LY R S +VL G D+E G VY
Sbjct: 84 IAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR--EQLSASVLVAGWDSELGGQVYAIP 141
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G R ++ GSGST + FLD+Q + P L L E +A+ VK
Sbjct: 142 IGGFVSRQRSTASGSGSTFVQGFLDSQWR---PDLT--------LEECKAI--VKQAVGL 188
Query: 192 ATERDIYTANKLEIVVLNKDG 212
AT RD + + + V++K G
Sbjct: 189 ATFRDGSSGGVVRLAVIDKTG 209
>gi|344285957|ref|XP_003414726.1| PREDICTED: proteasome subunit beta type-3-like [Loxodonta africana]
Length = 205
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + A+D R +++ D+ KI + D+ + +G DV+ + +
Sbjct: 7 NGGAVMAMKGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ + +++N LY KRF PYY+ V+ GLD + K + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 133 VG 134
+G
Sbjct: 127 IG 128
>gi|385773318|ref|YP_005645884.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
HVE10/4]
gi|385775950|ref|YP_005648518.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323474698|gb|ADX85304.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477432|gb|ADX82670.1| proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 211
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AAD R S G+ + ++ K++ + DK + ++G AD++ + +L
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYNVL 76
Query: 75 AARHLIYQHQHNKQ---MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
IY + + +S + L+N L ++FPY ++GG D++ + ++ D
Sbjct: 77 KN---IYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQPR--LFNLD 131
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G Y + GSGS + M L+++ L EA DL K S
Sbjct: 132 YLGDITEENYVATGSGSPVAMGVLEDEYNPKMTL-------------DEAADLAKRAVFS 178
Query: 192 ATERDIYTANKLEIVVLNKDGIHRE 216
A +RD +T + + ++ G H E
Sbjct: 179 AIKRDSFTGTGVIVAKIHSKG-HEE 202
>gi|449442012|ref|XP_004138776.1| PREDICTED: proteasome subunit beta type-6-like [Cucumis sativus]
gi|449499516|ref|XP_004160837.1| PREDICTED: proteasome subunit beta type-6-like [Cucumis sativus]
Length = 235
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 26/209 (12%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T + + V AD+R STG + +R KI KL D + SG AD + + +
Sbjct: 14 GTTIIGVTYKGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAADSQVVSDYV 73
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVY 128
R+ + HQH Q+ PA ++ +N + R Y + N+L GG D G +Y
Sbjct: 74 --RYFL--HQHTIQLGQPATVKVAANLV---RLLAYSNKNMLQTGLIVGGWDKYDGGRIY 126
Query: 129 TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC 188
G+ ++ GSGS+ + F D K +S EA LV
Sbjct: 127 GIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE-------------EMSREEAEQLVVKA 173
Query: 189 FASATERDIYTANKLEIVVLNKDGIHREY 217
+ A RD + + V +N +G+ R++
Sbjct: 174 VSLAIARDGASGGVVRTVTINSEGVTRKF 202
>gi|315426587|dbj|BAJ48216.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485345|dbj|BAJ50999.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 187
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 17 TCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA 76
T V + D V A+D R S G+ I S+ KI+K+ D +A +G +D L ++ A
Sbjct: 3 TIVGLKAVDGVVLASDRRASKGFFIASKTTQKIMKVDDSLAIAVAGLLSDAVYLVNVVRA 62
Query: 77 RHLIYQHQHNKQMSCPAMGQLLSNTLY--YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+ + +S +L+SN Y + + PYY+ ++ G+D+EG V++ D G
Sbjct: 63 ERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELIVAGVDDEGP-HVFSSDMSG 121
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S + S GSGS + L++ L +P L EA A+ + +A +
Sbjct: 122 SMVAEEFVSSGSGSPVAYGVLES-LYTPG----------LKLEEARAIAV--KAVEAAMQ 168
Query: 195 RDIYTANKLEIVVLNKDG 212
RD + N ++++ + G
Sbjct: 169 RDPGSGNGVDVLAIQVRG 186
>gi|330318776|gb|AEC11048.1| 20S proteasome beta subunit pbc2 [Camellia sinensis]
Length = 187
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 30 AADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM 89
A+D R+ ++ D+ +I K+ DK + +G D + + + L RH +YQ + + M
Sbjct: 6 ASDRRLGVQLQTIATDFQRIYKIHDKLSIGLAGLATDSQTMYQRLVFRHKLYQLREERDM 65
Query: 90 SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 137
L+S LY KRF PY+ V+ GL ++ K + T D++G+ E
Sbjct: 66 KPQTFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFICTMDSIGAKE 113
>gi|156848022|ref|XP_001646894.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
70294]
gi|156117575|gb|EDO19036.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
70294]
Length = 215
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G + +A+ D + AD+R +TG I +R K+ ++ DK SG AD +A+ ++
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAVADIV 78
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 134
+Y Q+ + + A + TL Y+ + ++ G D KG VY+ G
Sbjct: 79 QYHLEMYTAQYGEPSTEVAAS--IFKTLCYENKDNLTAGIIVAGYDEANKGQVYSIPLGG 136
Query: 135 SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 194
S R Y+ GSGST I + D K +++ E ++ +K + A +
Sbjct: 137 SVHRQPYAIAGSGSTFIYGYCDKNFKE-------------DMTKEETIEFMKHSLSQAIK 183
Query: 195 RDIYTANKLEIVVLNKDGIHR 215
D + + +VVL KDG R
Sbjct: 184 WDGSSGGVIRMVVLTKDGAER 204
>gi|449545308|gb|EMD36279.1| 20S proteasome subunit beta 3 [Ceriporiopsis subvermispora B]
Length = 208
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 8/210 (3%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG+ +A+ G D A+D R+ +S + KI + D+ + G DV L +
Sbjct: 7 NGGSVIAMVGKDCVAIASDLRLGNQSLGISSKFEKIFPMTDRVYVGLPGLATDVTTLHQQ 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
R +Y + +++ L+S+TLY KRF PY+ V+ GL G + Y +
Sbjct: 67 FRYRLNMYTIKEEREIEPETFAHLVSSTLYEKRFGPYFIEPVIAGLQKTPSGDLKPY--I 124
Query: 134 GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 193
+ + +G + + D L P L + + + +A
Sbjct: 125 AATDLIGCLNFAKDFVVAGTASDKLFGVAEGLWEP------DLEPEDLFETIAQTLLNAV 178
Query: 194 ERDIYTANKLEIVVLNKDGIHREYMELRKD 223
+RD Y+ + VL KD + + ++ R D
Sbjct: 179 DRDAYSGWGAVVYVLTKDKVIKRELKGRMD 208
>gi|357624159|gb|EHJ75038.1| hypothetical protein KGM_19166 [Danaus plexippus]
Length = 205
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 19 VAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARH 78
+ I D+ + AAD S ++ D KI K++DK VM G D + +A
Sbjct: 10 LGIQCNDFVMIAADQSNSHSIMVMKDDEEKIYKISDKLVMGVIGDSGDTNQFAEYIAKNI 69
Query: 79 LIYQHQHNKQMSCPAMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
+Y+ ++ ++ A L Y + PY+ ++GG D E +Y D + S
Sbjct: 70 QLYKMRNGYELGPSAAANFTRRNLAEYLRSSTPYFVNLLMGGYDKENGPELYFMDYLASS 129
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+V +++ G G L + +D K +DA +E EA +++K C +R
Sbjct: 130 MKVPFAAHGFGGYLSLSIMDRYHK---------KDA----TEEEAYEILKKCVQEVHKRL 176
Query: 197 IYTANKLEIVVLNKDGI 213
+ ++ V+N+DGI
Sbjct: 177 FVSLPNFQVTVVNRDGI 193
>gi|405951012|gb|EKC18961.1| Proteasome subunit beta type-6 [Crassostrea gigas]
Length = 218
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 6 PAWSPYDNNGGTCV-AIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQ 64
P W+ ++ GT + A+ V AD+R +TG I +R K+ K+ DK SG
Sbjct: 7 PDWTSAEHETGTTIMAVEYDGGVVIGADSRTTTGAYIANRVTDKLTKITDKIYCCRSGSA 66
Query: 65 ADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 124
AD +A+ ++ + HL +Q + + + L Y + ++GG D
Sbjct: 67 ADTQAVADIV-SYHLNFQKMDMGEEPKVKVAANIFRELCYNNRDNLSAGIIVGGWDKTEG 125
Query: 125 GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDL 184
G VY G R+ +++ GSGST I ++D K T +++ E +
Sbjct: 126 GQVYAIPLGGMLTRMPFTTGGSGSTYIYGYVDANFK-------------TGMTKEECLKF 172
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIHR 215
V A RD + + + +NKDG+ R
Sbjct: 173 VANGVGLAISRDGSSGGVVRLAAINKDGVER 203
>gi|47223967|emb|CAG06144.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NGG +A+ G + AAD R +++ D+ KI + ++ + +G DV+ + +
Sbjct: 7 NGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVSQR 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDA 132
L R +Y+ + +Q+ ++SN LY +RF PYY V+ GLD + + + + D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 133 VG-SYERVGYSSQGSGSTLIMPFLDNQLKSP----------SPLLLPAQDAVTPLSEAEA 181
+G E + G+ S + ++ L P S + A S EA
Sbjct: 127 IGCPMETEDFVVSGTCSEQMYGMCES-LWEPDMVSWTFLRRSDTTMMANGFRPAASRQEA 185
Query: 182 VDLVKT---CFASATERDIYTANKLEIVVLNKDGIHREYMELRKD 223
DL +T +A +RD + + + V+ KD I ++ R D
Sbjct: 186 EDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 230
>gi|326495934|dbj|BAJ90589.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + V AAD+R STG + +R KI +L D + SG AD + + +
Sbjct: 23 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQLTDNVYVCRSGSAADTQIISDYV 82
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSN---TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
R+ + HQH Q+ PA ++ SN L Y+ + ++GG D G +Y+
Sbjct: 83 --RYFL--HQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVP 138
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G+ R ++ GSGS+ + +D++ K +++ EA V +
Sbjct: 139 LGGTILRQPFAIGGSGSSYLYGLMDHEWKE-------------GMTQEEAEKFVVKVVSL 185
Query: 192 ATERDIYTANKLEIVVLNKDGIHREY 217
A RD + + V +N++G+ R +
Sbjct: 186 AIARDGASGGVVRTVTINEEGVKRSF 211
>gi|322697964|gb|EFY89738.1| 20S proteasome subunit [Metarhizium acridum CQMa 102]
Length = 261
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
G + +AI D V AAD S G D ++ AD V+ GF D+ +Q L
Sbjct: 39 TGTSVIAIKFKDGVVMAADNLASYGSLARFTDVKRLRPFADASVV---GFSGDISDMQYL 95
Query: 74 LAARHLI-------YQHQHNKQMSCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGK 124
RHL Y + +++ + + LS LY +R F P ++ ++ GLD++G
Sbjct: 96 --DRHLTDLALTEAYDSPDSARLNASNLHRYLSKLLYRRRSKFDPLWNHLLVAGLDDKGT 153
Query: 125 GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDL 184
+ D +G+ + G G+ L P + P +++ L+ EAVD+
Sbjct: 154 PFLAAADLLGTTYSAPSLATGFGAMLAQPVMRR--------YAPDEESAAKLTREEAVDI 205
Query: 185 VKTCFASATERDIYTANKLEIVVLNKDGIH-REYMEL 220
+K C RD + + + ++ KDG+ RE +L
Sbjct: 206 IKECMKVLFYRDARSLDSYSLAIVTKDGVELRENQKL 242
>gi|227827648|ref|YP_002829428.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830344|ref|YP_002832124.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579161|ref|YP_002837559.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229584852|ref|YP_002843354.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238619816|ref|YP_002914642.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284997769|ref|YP_003419536.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|302595712|sp|D2PK63.1|PSB1_SULID RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595725|sp|C4KHB0.1|PSB1_SULIK RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595727|sp|C3MQ16.1|PSB1_SULIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595742|sp|C3MVD5.1|PSB1_SULIM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595747|sp|C3N5N4.1|PSB1_SULIA RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595752|sp|C3NE98.1|PSB1_SULIY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|227456792|gb|ACP35479.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459444|gb|ACP38130.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228009875|gb|ACP45637.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228019902|gb|ACP55309.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238380886|gb|ACR41974.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284445664|gb|ADB87166.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
Length = 211
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V I D V AAD R S G+ + ++ K++ + DK + ++G AD++ + +L
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 AARHLIYQHQHNKQ---MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
IY + + +S + L+N L ++FPY ++GG D++ + ++ D
Sbjct: 77 KN---IYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQPR--LFNLD 131
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
+G Y + GSGS + M L+++ L EA DL K S
Sbjct: 132 YLGDITEENYVATGSGSPVAMGVLEDEYNPKMTL-------------DEAADLAKRAVFS 178
Query: 192 ATERDIYTANKLEIVVLNKDGIHRE 216
A +RD +T + + ++ G H E
Sbjct: 179 AIKRDSFTGTGVIVAKIHSKG-HEE 202
>gi|58332308|ref|NP_001011057.1| proteasome (prosome, macropain) subunit, beta type, 2 [Xenopus
(Silurana) tropicalis]
gi|54038181|gb|AAH84185.1| hypothetical LOC496467 [Xenopus (Silurana) tropicalis]
gi|89266833|emb|CAJ83920.1| proteasome (prosome macropain) subunit beta type 2 [Xenopus
(Silurana) tropicalis]
Length = 199
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 19 VAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARH 78
+ I G D+ + AADT + + D K+ K+++K ++ G D + +
Sbjct: 5 IGIQGNDFVLVAADTVCANSIIKMKHDVDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNV 64
Query: 79 LIYQHQHNKQMSCPAMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY 136
+Y+ ++ ++S A L Y + PY+ +L G D +Y D + +
Sbjct: 65 QLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHDGPSLYYMDYLAAL 124
Query: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 196
+ +++ G G+ L + LD K L+ +AV+L+K C A +R
Sbjct: 125 AKTRFAAHGYGAYLTLSILDRYYKPD-------------LTREDAVELLKKCIAELQKRF 171
Query: 197 IYTANKLEIVVLNKDGIH 214
I + + V++KDGIH
Sbjct: 172 ILSLPSFTVRVIDKDGIH 189
>gi|326519234|dbj|BAJ96616.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 15 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLL 74
G T V + V AAD+R STG + +R KI +L D + SG AD + + +
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQLTDNVYVCRSGSAADTQIISDYV 84
Query: 75 AARHLIYQHQHNKQMSCPAMGQLLSN---TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 131
R+ + HQH Q+ PA ++ SN L Y+ + ++GG D G +Y+
Sbjct: 85 --RYFL--HQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVP 140
Query: 132 AVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 191
G+ R ++ GSGS+ + +D++ K +++ EA V +
Sbjct: 141 LGGTILRQPFAIGGSGSSYLYGLMDHEWKE-------------GMTQEEAEKFVVKVVSL 187
Query: 192 ATERDIYTANKLEIVVLNKDGIHREY 217
A RD + + V +N++G+ R +
Sbjct: 188 AIARDGASGGVVRTVTINEEGVKRSF 213
>gi|219126883|ref|XP_002183677.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404914|gb|EEC44859.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 204
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 14 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKL 73
NG +A+AG D AAD R+ ++ D++K+ + K + +G DV+ L+ +
Sbjct: 7 NGAAMIAMAGKDCVGIAADRRLGVQLQTVATDFNKVFAMGPKSYVGLAGLATDVQTLKNI 66
Query: 74 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 133
L R +Y+ + ++MS + LLS LY KRF PY+ ++ GL+ + K + D +
Sbjct: 67 LEFRKNLYELKEEREMSPATLSHLLSTLLYEKRFGPYFVEPIVAGLNEKNKPFLSAMDLI 126
Query: 134 GS 135
G+
Sbjct: 127 GA 128
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,400,147,408
Number of Sequences: 23463169
Number of extensions: 131006412
Number of successful extensions: 307868
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1834
Number of HSP's successfully gapped in prelim test: 1782
Number of HSP's that attempted gapping in prelim test: 303436
Number of HSP's gapped (non-prelim): 3674
length of query: 223
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 86
effective length of database: 9,144,741,214
effective search space: 786447744404
effective search space used: 786447744404
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)