Query 027439
Match_columns 223
No_of_seqs 169 out of 1703
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 16:37:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027439.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027439hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.7 8.7E-17 3E-21 123.2 12.5 95 126-222 20-114 (126)
2 3gyz_A Chaperone protein IPGC; 99.6 1.2E-15 4.2E-20 121.6 11.5 94 127-222 44-137 (151)
3 4ga2_A E3 SUMO-protein ligase 99.6 1.7E-15 6E-20 118.6 10.0 95 126-222 38-133 (150)
4 3sz7_A HSC70 cochaperone (SGT) 99.6 6.5E-15 2.2E-19 115.3 11.6 95 126-222 18-112 (164)
5 3upv_A Heat shock protein STI1 99.6 6.4E-15 2.2E-19 110.1 11.0 92 126-219 11-102 (126)
6 4gcn_A Protein STI-1; structur 99.6 8.4E-15 2.9E-19 111.8 10.2 94 126-221 15-115 (127)
7 2vgx_A Chaperone SYCD; alterna 99.6 1.2E-14 4E-19 114.0 11.2 94 127-222 29-122 (148)
8 2xcb_A PCRH, regulatory protei 99.6 9.9E-15 3.4E-19 112.3 10.5 94 127-222 26-119 (142)
9 1hxi_A PEX5, peroxisome target 99.6 8.7E-15 3E-19 111.0 9.2 94 127-222 25-118 (121)
10 4ga2_A E3 SUMO-protein ligase 99.6 5E-15 1.7E-19 116.0 7.0 96 125-222 3-98 (150)
11 3rkv_A Putative peptidylprolyl 99.6 1.4E-14 4.7E-19 113.2 9.2 95 126-222 18-130 (162)
12 2hr2_A Hypothetical protein; a 99.5 2E-14 6.8E-19 117.1 8.1 93 128-222 20-135 (159)
13 3q49_B STIP1 homology and U bo 99.5 6.6E-14 2.3E-18 104.8 10.3 94 126-221 16-109 (137)
14 1elw_A TPR1-domain of HOP; HOP 99.5 2.1E-13 7.3E-18 97.7 11.7 94 127-222 12-105 (118)
15 3urz_A Uncharacterized protein 99.5 6.6E-14 2.3E-18 114.6 10.0 93 128-222 13-121 (208)
16 3k9i_A BH0479 protein; putativ 99.5 3.4E-14 1.2E-18 105.8 7.1 89 132-222 3-94 (117)
17 2lni_A Stress-induced-phosphop 99.5 1.5E-13 5.1E-18 101.1 10.2 95 126-222 23-117 (133)
18 2kck_A TPR repeat; tetratricop 99.5 1.9E-13 6.5E-18 97.4 10.5 95 126-222 13-110 (112)
19 2dba_A Smooth muscle cell asso 99.5 2.9E-13 9.9E-18 101.6 11.5 95 126-222 35-132 (148)
20 2vyi_A SGTA protein; chaperone 99.5 5.3E-13 1.8E-17 97.1 12.4 94 127-222 20-113 (131)
21 3vtx_A MAMA; tetratricopeptide 99.5 1.5E-13 5.2E-18 108.2 10.1 94 127-222 81-174 (184)
22 2xev_A YBGF; tetratricopeptide 99.5 4.6E-13 1.6E-17 99.2 11.7 94 127-222 10-109 (129)
23 1zu2_A Mitochondrial import re 99.5 1.8E-13 6E-18 111.4 9.6 90 131-222 14-124 (158)
24 2pl2_A Hypothetical conserved 99.5 2.3E-13 7.7E-18 112.1 10.3 95 126-222 12-117 (217)
25 1a17_A Serine/threonine protei 99.5 7.7E-13 2.6E-17 101.1 12.4 95 126-222 20-114 (166)
26 4gyw_A UDP-N-acetylglucosamine 99.5 3.3E-13 1.1E-17 132.2 12.5 95 126-222 16-110 (723)
27 1na0_A Designed protein CTPR3; 99.5 1.4E-12 4.7E-17 94.1 12.5 95 126-222 16-110 (125)
28 2e2e_A Formate-dependent nitri 99.4 6.7E-13 2.3E-17 104.3 11.0 96 126-222 51-148 (177)
29 4gyw_A UDP-N-acetylglucosamine 99.4 5.8E-13 2E-17 130.4 12.5 95 126-222 50-144 (723)
30 2fbn_A 70 kDa peptidylprolyl i 99.4 9.5E-13 3.3E-17 105.9 11.5 95 126-222 45-155 (198)
31 3urz_A Uncharacterized protein 99.4 6.8E-13 2.3E-17 108.6 10.0 97 125-222 60-190 (208)
32 1p5q_A FKBP52, FK506-binding p 99.4 1E-12 3.5E-17 116.1 11.7 94 127-222 155-263 (336)
33 4i17_A Hypothetical protein; T 99.4 1.5E-12 5E-17 106.2 11.7 95 126-222 14-109 (228)
34 2pl2_A Hypothetical conserved 99.4 1.3E-12 4.4E-17 107.6 10.9 91 127-219 47-148 (217)
35 1elr_A TPR2A-domain of HOP; HO 99.4 1.6E-12 5.3E-17 94.8 10.1 94 126-221 11-111 (131)
36 3vtx_A MAMA; tetratricopeptide 99.4 2.6E-12 8.8E-17 101.1 11.8 94 126-221 12-105 (184)
37 2c2l_A CHIP, carboxy terminus 99.4 1.1E-12 3.9E-17 112.7 9.4 95 126-222 11-105 (281)
38 2kat_A Uncharacterized protein 99.4 2.9E-12 9.8E-17 94.4 9.9 84 136-221 2-85 (115)
39 2h6f_A Protein farnesyltransfe 99.4 1.7E-12 5.7E-17 117.9 10.2 94 127-222 105-199 (382)
40 1xnf_A Lipoprotein NLPI; TPR, 99.4 4.6E-12 1.6E-16 104.1 12.0 94 127-222 51-144 (275)
41 1wao_1 Serine/threonine protei 99.4 6E-12 2E-16 116.8 14.1 96 125-222 12-107 (477)
42 1hh8_A P67PHOX, NCF-2, neutrop 99.4 3.8E-12 1.3E-16 102.0 10.7 95 126-222 44-154 (213)
43 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 2.3E-12 7.9E-17 118.6 10.6 95 126-222 275-384 (457)
44 2h6f_A Protein farnesyltransfe 99.4 1.2E-12 4E-17 118.9 8.5 94 127-222 139-233 (382)
45 4i17_A Hypothetical protein; T 99.4 2.3E-12 8E-17 104.9 9.5 94 126-221 49-149 (228)
46 2fo7_A Synthetic consensus TPR 99.3 1.1E-11 3.7E-16 89.9 10.7 91 129-221 45-135 (136)
47 3gyz_A Chaperone protein IPGC; 99.3 2.1E-12 7.1E-17 102.8 7.3 87 135-223 18-104 (151)
48 3uq3_A Heat shock protein STI1 99.3 9E-12 3.1E-16 101.0 11.0 92 126-219 146-237 (258)
49 1ihg_A Cyclophilin 40; ppiase 99.3 3.6E-12 1.2E-16 114.8 9.4 95 126-222 230-340 (370)
50 2fo7_A Synthetic consensus TPR 99.3 1.9E-11 6.6E-16 88.5 11.2 94 127-222 9-102 (136)
51 3as5_A MAMA; tetratricopeptide 99.3 2.9E-11 9.9E-16 92.7 12.4 93 128-222 51-143 (186)
52 3as5_A MAMA; tetratricopeptide 99.3 1.3E-11 4.5E-16 94.6 10.4 95 126-222 83-177 (186)
53 2vgx_A Chaperone SYCD; alterna 99.3 3.5E-12 1.2E-16 99.7 7.2 84 138-223 6-89 (148)
54 2if4_A ATFKBP42; FKBP-like, al 99.3 3.4E-12 1.2E-16 112.9 7.7 95 126-222 186-297 (338)
55 2e2e_A Formate-dependent nitri 99.3 1.3E-11 4.4E-16 96.9 9.6 93 129-222 20-114 (177)
56 4eqf_A PEX5-related protein; a 99.3 3.2E-11 1.1E-15 104.3 12.6 95 126-222 184-280 (365)
57 4eqf_A PEX5-related protein; a 99.3 1.1E-11 3.8E-16 107.1 9.3 95 126-222 220-314 (365)
58 2q7f_A YRRB protein; TPR, prot 99.3 2.6E-11 8.8E-16 97.8 10.6 92 129-222 135-226 (243)
59 4gco_A Protein STI-1; structur 99.3 1.8E-11 6.2E-16 93.3 8.9 77 144-222 4-80 (126)
60 2q7f_A YRRB protein; TPR, prot 99.3 6E-11 2E-15 95.7 12.4 95 126-222 64-158 (243)
61 1fch_A Peroxisomal targeting s 99.3 2.7E-11 9.3E-16 103.9 10.7 93 127-221 225-317 (368)
62 3mkr_A Coatomer subunit epsilo 99.2 3.4E-11 1.2E-15 104.2 11.2 89 132-222 179-268 (291)
63 2vsy_A XCC0866; transferase, g 99.2 3.1E-11 1.1E-15 112.4 11.4 94 127-222 31-124 (568)
64 1fch_A Peroxisomal targeting s 99.2 5.8E-11 2E-15 101.8 12.2 95 126-222 71-165 (368)
65 3u4t_A TPR repeat-containing p 99.2 2.4E-11 8.3E-16 100.1 9.2 96 125-222 80-175 (272)
66 4abn_A Tetratricopeptide repea 99.2 2.2E-11 7.7E-16 112.2 9.8 88 133-222 193-291 (474)
67 2xcb_A PCRH, regulatory protei 99.2 2.2E-11 7.4E-16 93.4 7.7 82 140-223 5-86 (142)
68 3uq3_A Heat shock protein STI1 99.2 5.1E-11 1.7E-15 96.4 10.3 95 126-222 86-206 (258)
69 4abn_A Tetratricopeptide repea 99.2 3.6E-11 1.2E-15 110.8 10.2 94 126-222 109-212 (474)
70 1w3b_A UDP-N-acetylglucosamine 99.2 9.1E-11 3.1E-15 102.4 12.2 93 128-222 212-304 (388)
71 1hh8_A P67PHOX, NCF-2, neutrop 99.2 6.9E-11 2.4E-15 94.5 10.0 91 127-222 14-104 (213)
72 3ieg_A DNAJ homolog subfamily 99.2 8.4E-11 2.9E-15 99.2 11.0 93 126-220 10-102 (359)
73 1w3b_A UDP-N-acetylglucosamine 99.2 7.2E-11 2.4E-15 103.1 10.5 95 126-222 244-338 (388)
74 2ho1_A Type 4 fimbrial biogene 99.2 1.7E-10 5.9E-15 94.1 12.1 95 126-222 148-242 (252)
75 3cv0_A Peroxisome targeting si 99.2 1.3E-10 4.4E-15 97.3 11.6 89 131-221 184-272 (327)
76 2l6j_A TPR repeat-containing p 99.2 6E-12 2.1E-16 90.4 3.0 88 126-215 11-104 (111)
77 3qou_A Protein YBBN; thioredox 99.2 7.6E-11 2.6E-15 101.3 10.3 94 127-222 125-252 (287)
78 2ho1_A Type 4 fimbrial biogene 99.2 1.2E-10 4.1E-15 95.1 10.9 95 126-222 78-174 (252)
79 3cv0_A Peroxisome targeting si 99.2 1.8E-10 6.2E-15 96.4 12.2 94 127-222 29-122 (327)
80 1xnf_A Lipoprotein NLPI; TPR, 99.2 8.3E-11 2.8E-15 96.6 10.0 93 128-222 14-110 (275)
81 2vq2_A PILW, putative fimbrial 99.2 1.4E-10 4.9E-15 91.9 10.9 86 133-220 56-144 (225)
82 2kc7_A BFR218_protein; tetratr 99.2 1.5E-11 5.1E-16 87.8 4.4 86 127-222 8-94 (99)
83 2vq2_A PILW, putative fimbrial 99.2 1.7E-10 5.7E-15 91.5 10.9 93 126-220 83-178 (225)
84 2y4t_A DNAJ homolog subfamily 99.2 1.3E-10 4.4E-15 102.5 11.0 95 126-222 33-127 (450)
85 2vsy_A XCC0866; transferase, g 99.2 1.8E-10 6.3E-15 107.1 12.6 95 126-222 64-161 (568)
86 3ieg_A DNAJ homolog subfamily 99.2 2.4E-10 8.1E-15 96.5 11.8 95 126-222 127-221 (359)
87 3ma5_A Tetratricopeptide repea 99.2 1.3E-10 4.6E-15 84.5 8.9 71 148-220 2-72 (100)
88 3u4t_A TPR repeat-containing p 99.2 9.9E-11 3.4E-15 96.4 9.1 93 127-222 11-107 (272)
89 2gw1_A Mitochondrial precursor 99.1 2.6E-10 8.8E-15 101.7 11.9 94 126-222 13-106 (514)
90 2pzi_A Probable serine/threoni 99.1 3.2E-11 1.1E-15 116.2 6.4 94 126-222 440-533 (681)
91 3hym_B Cell division cycle pro 99.1 1.9E-10 6.5E-15 96.4 10.2 86 134-221 106-191 (330)
92 3qky_A Outer membrane assembly 99.1 2.3E-10 7.7E-15 95.3 10.5 95 127-222 23-130 (261)
93 3hym_B Cell division cycle pro 99.1 2.4E-10 8.2E-15 95.8 10.6 91 127-219 133-223 (330)
94 3qky_A Outer membrane assembly 99.1 1.5E-10 5E-15 96.5 9.1 95 126-222 59-181 (261)
95 2pzi_A Probable serine/threoni 99.1 3.8E-10 1.3E-14 108.8 12.3 92 130-223 402-501 (681)
96 1a17_A Serine/threonine protei 99.1 4.1E-10 1.4E-14 85.7 10.1 91 126-218 54-146 (166)
97 2y4t_A DNAJ homolog subfamily 99.1 3E-10 1E-14 100.2 10.4 95 126-222 264-362 (450)
98 3fp2_A TPR repeat-containing p 99.1 6.5E-10 2.2E-14 100.0 12.8 95 126-222 283-377 (537)
99 2r5s_A Uncharacterized protein 99.1 1E-10 3.4E-15 92.6 6.6 48 173-221 93-140 (176)
100 3fp2_A TPR repeat-containing p 99.1 1.7E-10 5.9E-15 103.8 8.9 94 126-222 32-125 (537)
101 3mkr_A Coatomer subunit epsilo 99.1 6.1E-10 2.1E-14 96.3 11.8 97 125-222 136-233 (291)
102 2xpi_A Anaphase-promoting comp 99.1 5.6E-10 1.9E-14 102.2 11.7 96 125-222 481-583 (597)
103 1na3_A Designed protein CTPR2; 99.1 6E-10 2.1E-14 77.2 9.1 71 128-199 18-88 (91)
104 4gcn_A Protein STI-1; structur 99.1 4.5E-10 1.6E-14 85.3 8.9 69 152-222 7-75 (127)
105 1p5q_A FKBP52, FK506-binding p 99.1 4.9E-10 1.7E-14 98.8 10.1 91 126-218 203-294 (336)
106 2yhc_A BAMD, UPF0169 lipoprote 99.1 3.1E-10 1.1E-14 93.3 8.2 95 127-222 12-129 (225)
107 1qqe_A Vesicular transport pro 99.1 3.2E-10 1.1E-14 97.2 7.9 95 126-222 84-191 (292)
108 2ond_A Cleavage stimulation fa 99.0 9.2E-10 3.1E-14 94.7 10.8 85 136-222 81-167 (308)
109 2yhc_A BAMD, UPF0169 lipoprote 99.0 4.4E-10 1.5E-14 92.4 8.3 96 126-222 48-180 (225)
110 2ond_A Cleavage stimulation fa 99.0 5.2E-10 1.8E-14 96.2 9.0 95 127-222 107-202 (308)
111 2if4_A ATFKBP42; FKBP-like, al 99.0 1.1E-10 3.6E-15 103.3 4.6 96 126-222 237-332 (338)
112 2r5s_A Uncharacterized protein 99.0 9.4E-11 3.2E-15 92.8 3.5 94 127-222 14-107 (176)
113 1na3_A Designed protein CTPR2; 99.0 2.1E-09 7.2E-14 74.4 9.9 70 151-222 7-76 (91)
114 1qqe_A Vesicular transport pro 99.0 2.8E-10 9.5E-15 97.6 6.3 96 125-222 123-232 (292)
115 3upv_A Heat shock protein STI1 99.0 1.8E-09 6E-14 80.1 9.9 71 150-222 1-71 (126)
116 2xpi_A Anaphase-promoting comp 99.0 1.7E-09 5.7E-14 99.0 11.4 94 127-222 381-474 (597)
117 2l6j_A TPR repeat-containing p 99.0 1.6E-09 5.6E-14 77.4 9.0 69 152-222 3-71 (111)
118 3bee_A Putative YFRE protein; 99.0 1.9E-09 6.5E-14 79.3 9.4 72 149-222 2-76 (93)
119 4g1t_A Interferon-induced prot 99.0 3E-09 1E-13 94.7 11.4 96 126-222 58-171 (472)
120 2gw1_A Mitochondrial precursor 99.0 8.6E-10 2.9E-14 98.2 7.6 94 127-222 380-482 (514)
121 3q49_B STIP1 homology and U bo 99.0 7E-09 2.4E-13 77.0 11.4 74 147-222 3-76 (137)
122 2kck_A TPR repeat; tetratricop 99.0 2.1E-09 7.1E-14 76.0 7.8 72 148-221 1-72 (112)
123 3nf1_A KLC 1, kinesin light ch 98.9 1.3E-09 4.3E-14 90.6 7.3 94 126-221 160-310 (311)
124 3sz7_A HSC70 cochaperone (SGT) 98.9 4.5E-09 1.5E-13 81.7 10.0 72 149-222 7-78 (164)
125 3edt_B KLC 2, kinesin light ch 98.9 1.4E-09 4.6E-14 88.7 7.3 92 125-218 91-198 (283)
126 2fbn_A 70 kDa peptidylprolyl i 98.9 2.1E-09 7.2E-14 86.1 7.4 90 126-217 95-185 (198)
127 1wao_1 Serine/threonine protei 98.9 4E-10 1.4E-14 104.4 3.1 94 126-221 47-153 (477)
128 2vyi_A SGTA protein; chaperone 98.9 4.7E-09 1.6E-13 75.9 8.0 78 126-205 53-130 (131)
129 2lni_A Stress-induced-phosphop 98.9 5.9E-09 2E-13 76.1 8.6 76 126-203 57-132 (133)
130 3edt_B KLC 2, kinesin light ch 98.9 1.8E-09 6.2E-14 87.9 6.2 91 126-218 50-156 (283)
131 3k9i_A BH0479 protein; putativ 98.9 4.1E-09 1.4E-13 77.9 7.0 69 126-195 34-102 (117)
132 4g1t_A Interferon-induced prot 98.9 3.8E-09 1.3E-13 94.0 7.8 61 133-194 227-287 (472)
133 1hxi_A PEX5, peroxisome target 98.8 2.2E-08 7.4E-13 75.4 10.3 65 156-222 20-84 (121)
134 2ifu_A Gamma-SNAP; membrane fu 98.8 5.8E-09 2E-13 89.9 7.9 94 125-222 122-227 (307)
135 2kc7_A BFR218_protein; tetratr 98.8 2.3E-08 8E-13 70.9 9.7 64 157-222 4-68 (99)
136 2qfc_A PLCR protein; TPR, HTH, 98.8 2.9E-08 9.9E-13 84.5 12.0 91 127-219 123-226 (293)
137 3ro2_A PINS homolog, G-protein 98.8 6.7E-09 2.3E-13 86.1 7.4 93 126-220 12-114 (338)
138 4a1s_A PINS, partner of inscut 98.8 1.2E-08 4.2E-13 88.9 9.0 91 126-218 55-155 (411)
139 3ro3_A PINS homolog, G-protein 98.8 7.1E-09 2.4E-13 77.1 6.4 90 127-218 17-118 (164)
140 3u3w_A Transcriptional activat 98.8 6.3E-09 2.1E-13 88.6 6.3 92 125-218 161-266 (293)
141 3qou_A Protein YBBN; thioredox 98.8 2.1E-08 7.1E-13 86.0 9.6 83 134-218 200-284 (287)
142 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 9.6E-09 3.3E-13 94.3 7.8 89 125-215 323-412 (457)
143 3sf4_A G-protein-signaling mod 98.8 1.2E-08 4E-13 87.8 7.9 93 126-220 16-118 (406)
144 3ro3_A PINS homolog, G-protein 98.8 1.3E-08 4.4E-13 75.7 7.1 93 126-220 56-160 (164)
145 3rkv_A Putative peptidylprolyl 98.8 2.6E-09 8.7E-14 83.0 3.3 73 126-199 70-143 (162)
146 1pc2_A Mitochondria fission pr 98.8 3.8E-08 1.3E-12 79.4 10.1 88 133-222 12-104 (152)
147 1na0_A Designed protein CTPR3; 98.8 3.8E-08 1.3E-12 70.4 9.1 74 126-200 50-123 (125)
148 2ifu_A Gamma-SNAP; membrane fu 98.8 4.2E-09 1.4E-13 90.8 4.7 92 126-220 83-186 (307)
149 3nf1_A KLC 1, kinesin light ch 98.8 5.8E-09 2E-13 86.5 5.4 92 126-219 118-225 (311)
150 3ulq_A Response regulator aspa 98.8 1.5E-08 5.2E-13 88.8 7.9 92 126-219 191-294 (383)
151 3u3w_A Transcriptional activat 98.8 9.4E-09 3.2E-13 87.5 6.2 91 128-220 124-227 (293)
152 3gw4_A Uncharacterized protein 98.7 1.3E-08 4.5E-13 79.9 6.5 90 127-218 34-136 (203)
153 2ooe_A Cleavage stimulation fa 98.7 2.6E-08 9E-13 91.6 9.4 94 127-221 329-423 (530)
154 1ihg_A Cyclophilin 40; ppiase 98.7 2.2E-08 7.5E-13 89.9 8.6 84 126-211 280-363 (370)
155 2qfc_A PLCR protein; TPR, HTH, 98.7 2.7E-08 9.2E-13 84.7 8.3 91 126-218 162-266 (293)
156 1elw_A TPR1-domain of HOP; HOP 98.7 1.1E-07 3.7E-12 67.4 10.2 69 152-222 3-71 (118)
157 3u64_A Protein TP_0956; tetrat 98.7 3.7E-08 1.3E-12 87.3 9.2 88 133-221 177-272 (301)
158 2dba_A Smooth muscle cell asso 98.7 8.7E-08 3E-12 71.2 9.9 74 147-222 22-98 (148)
159 1ouv_A Conserved hypothetical 98.7 1E-07 3.5E-12 79.2 11.4 84 129-218 16-107 (273)
160 1dce_A Protein (RAB geranylger 98.7 7.6E-08 2.6E-12 91.5 11.6 87 135-223 45-143 (567)
161 3rjv_A Putative SEL1 repeat pr 98.7 6.5E-08 2.2E-12 79.1 9.5 86 132-219 102-198 (212)
162 3q15_A PSP28, response regulat 98.7 3.1E-08 1.1E-12 87.0 7.7 94 125-220 188-292 (378)
163 3dra_A Protein farnesyltransfe 98.7 1.3E-07 4.3E-12 83.8 10.8 88 134-223 48-144 (306)
164 2xev_A YBGF; tetratricopeptide 98.7 1.3E-07 4.6E-12 69.2 9.1 74 126-200 46-122 (129)
165 1ouv_A Conserved hypothetical 98.7 2.2E-07 7.6E-12 77.2 11.5 82 132-219 55-144 (273)
166 2ooe_A Cleavage stimulation fa 98.6 1.3E-07 4.6E-12 86.9 11.0 86 136-222 255-354 (530)
167 1elr_A TPR2A-domain of HOP; HO 98.6 7.4E-08 2.5E-12 69.6 7.4 69 151-221 2-70 (131)
168 3dra_A Protein farnesyltransfe 98.6 1.3E-07 4.5E-12 83.7 10.1 89 134-223 84-180 (306)
169 3sf4_A G-protein-signaling mod 98.6 5.3E-08 1.8E-12 83.7 7.3 91 126-218 234-336 (406)
170 3ulq_A Response regulator aspa 98.6 1.8E-08 6.2E-13 88.3 4.3 90 128-219 112-214 (383)
171 3ma5_A Tetratricopeptide repea 98.6 7.4E-08 2.5E-12 69.7 6.8 60 126-186 14-73 (100)
172 2c2l_A CHIP, carboxy terminus 98.6 1.6E-07 5.5E-12 80.3 10.0 71 150-222 1-71 (281)
173 3ro2_A PINS homolog, G-protein 98.6 3.6E-08 1.2E-12 81.6 5.5 92 127-220 231-334 (338)
174 3gw4_A Uncharacterized protein 98.6 5.7E-08 2E-12 76.2 6.3 91 126-218 73-176 (203)
175 1zu2_A Mitochondrial import re 98.6 1.2E-07 4.1E-12 76.9 8.3 59 134-193 61-130 (158)
176 1dce_A Protein (RAB geranylger 98.6 1.8E-07 6E-12 89.0 10.7 86 135-222 89-177 (567)
177 4a1s_A PINS, partner of inscut 98.6 5.2E-08 1.8E-12 84.9 6.4 93 126-220 270-374 (411)
178 3qww_A SET and MYND domain-con 98.6 1.2E-07 4.1E-12 87.7 8.9 85 132-218 311-411 (433)
179 1klx_A Cysteine rich protein B 98.6 9.7E-07 3.3E-11 68.0 12.6 90 125-219 31-127 (138)
180 2hr2_A Hypothetical protein; a 98.6 2.4E-07 8.2E-12 75.1 9.4 68 153-222 11-97 (159)
181 3n71_A Histone lysine methyltr 98.6 1.5E-07 5.1E-12 88.4 8.7 88 129-218 319-422 (490)
182 3ly7_A Transcriptional activat 98.6 7E-07 2.4E-11 81.5 12.8 87 133-221 213-342 (372)
183 3q7a_A Farnesyltransferase alp 98.5 3.3E-07 1.1E-11 82.9 9.8 89 134-223 69-159 (349)
184 3rjv_A Putative SEL1 repeat pr 98.5 2.6E-07 8.7E-12 75.6 8.3 83 133-218 67-158 (212)
185 3dss_A Geranylgeranyl transfer 98.5 7.6E-07 2.6E-11 79.9 11.9 88 134-222 125-226 (331)
186 2kat_A Uncharacterized protein 98.5 2.1E-07 7.2E-12 67.9 6.8 61 126-187 26-86 (115)
187 3dss_A Geranylgeranyl transfer 98.5 1.7E-06 5.9E-11 77.5 13.4 88 134-223 89-179 (331)
188 2v5f_A Prolyl 4-hydroxylase su 98.4 1.9E-06 6.3E-11 63.4 10.3 69 126-195 12-87 (104)
189 4f3v_A ESX-1 secretion system 98.4 3.9E-07 1.3E-11 80.2 7.3 92 128-221 144-240 (282)
190 3q15_A PSP28, response regulat 98.4 2.6E-07 8.9E-12 81.0 5.9 87 130-218 112-211 (378)
191 3qwp_A SET and MYND domain-con 98.4 5E-07 1.7E-11 83.2 7.8 86 131-218 299-400 (429)
192 3q7a_A Farnesyltransferase alp 98.4 7.9E-07 2.7E-11 80.4 8.7 89 134-223 104-201 (349)
193 1hz4_A MALT regulatory protein 98.4 9.6E-07 3.3E-11 76.4 8.7 92 126-219 100-204 (373)
194 2v5f_A Prolyl 4-hydroxylase su 98.4 1.3E-06 4.4E-11 64.3 7.9 59 162-222 14-79 (104)
195 1hz4_A MALT regulatory protein 98.3 4.8E-07 1.6E-11 78.4 6.0 93 127-221 61-167 (373)
196 3bee_A Putative YFRE protein; 98.2 3.3E-06 1.1E-10 61.7 7.5 56 134-190 24-79 (93)
197 3e4b_A ALGK; tetratricopeptide 98.2 2.8E-06 9.5E-11 77.5 7.6 89 127-219 184-281 (452)
198 2xm6_A Protein corresponding t 98.2 8.8E-06 3E-10 73.9 10.4 82 134-220 346-434 (490)
199 3n71_A Histone lysine methyltr 98.1 5.5E-06 1.9E-10 77.7 7.3 92 125-218 357-464 (490)
200 1nzn_A CGI-135 protein, fissio 98.1 2.2E-05 7.6E-10 61.3 9.4 87 134-222 16-107 (126)
201 3e4b_A ALGK; tetratricopeptide 98.0 9.4E-06 3.2E-10 74.0 7.8 77 133-216 231-314 (452)
202 1klx_A Cysteine rich protein B 98.0 3.5E-05 1.2E-09 59.1 9.7 79 133-218 9-90 (138)
203 2xm6_A Protein corresponding t 98.0 5E-05 1.7E-09 68.9 11.4 82 132-218 56-144 (490)
204 4f3v_A ESX-1 secretion system 97.9 3.2E-06 1.1E-10 74.3 2.4 87 129-218 112-200 (282)
205 3mv2_B Coatomer subunit epsilo 97.8 3.2E-05 1.1E-09 68.8 7.2 82 134-222 193-286 (310)
206 4b4t_Q 26S proteasome regulato 97.8 4.4E-05 1.5E-09 66.8 7.9 89 129-219 105-205 (434)
207 1pc2_A Mitochondria fission pr 97.8 5E-05 1.7E-09 61.0 7.0 61 134-195 50-112 (152)
208 4e6h_A MRNA 3'-END-processing 97.8 0.00013 4.3E-09 71.1 11.1 81 136-218 326-407 (679)
209 3mv2_B Coatomer subunit epsilo 97.8 4.2E-05 1.4E-09 68.0 6.9 95 125-221 106-210 (310)
210 3u64_A Protein TP_0956; tetrat 97.6 0.0004 1.4E-08 61.5 10.8 73 149-222 148-237 (301)
211 4e6h_A MRNA 3'-END-processing 97.5 0.00031 1.1E-08 68.3 9.9 88 133-222 484-574 (679)
212 4b4t_Q 26S proteasome regulato 97.5 0.00013 4.4E-09 63.8 5.8 91 126-218 142-245 (434)
213 1xi4_A Clathrin heavy chain; a 97.4 0.00037 1.3E-08 72.9 8.9 78 132-221 1089-1166(1630)
214 1y8m_A FIS1; mitochondria, unk 97.4 0.0017 5.9E-08 51.6 10.8 85 135-222 22-110 (144)
215 3qww_A SET and MYND domain-con 97.4 0.00018 6.3E-09 66.3 5.8 70 125-195 346-428 (433)
216 1b89_A Protein (clathrin heavy 97.3 0.00043 1.5E-08 64.5 7.3 81 126-221 129-239 (449)
217 4h7y_A Dual specificity protei 97.3 0.0017 5.9E-08 52.4 9.5 83 136-221 36-126 (161)
218 3o48_A Mitochondria fission 1 97.3 0.00087 3E-08 52.7 7.6 85 135-222 23-111 (134)
219 1xi4_A Clathrin heavy chain; a 97.2 0.0006 2.1E-08 71.4 7.6 89 124-222 1200-1313(1630)
220 3qwp_A SET and MYND domain-con 97.1 0.00044 1.5E-08 63.5 5.1 69 126-195 336-417 (429)
221 3ly7_A Transcriptional activat 97.0 0.00054 1.8E-08 62.4 5.1 63 132-197 290-352 (372)
222 3ffl_A Anaphase-promoting comp 96.8 0.0045 1.5E-07 50.4 8.1 83 131-215 32-148 (167)
223 1nzn_A CGI-135 protein, fissio 96.7 0.0028 9.5E-08 49.3 6.2 61 134-195 53-115 (126)
224 2uy1_A Cleavage stimulation fa 96.6 0.017 5.7E-07 53.5 11.4 87 134-223 152-246 (493)
225 3o48_A Mitochondria fission 1 96.6 0.0075 2.6E-07 47.3 7.5 63 133-196 57-120 (134)
226 2uy1_A Cleavage stimulation fa 96.5 0.014 4.7E-07 54.1 10.1 82 132-215 299-380 (493)
227 1y8m_A FIS1; mitochondria, unk 96.5 0.011 3.8E-07 46.9 8.0 62 133-195 56-118 (144)
228 2ff4_A Probable regulatory pro 95.8 0.11 3.7E-06 46.7 12.4 83 133-217 129-233 (388)
229 1zbp_A Hypothetical protein VP 95.7 0.18 6.3E-06 43.9 12.8 90 131-221 9-132 (273)
230 1ya0_A SMG-7 transcript varian 95.3 0.031 1.1E-06 52.5 7.1 66 132-198 165-230 (497)
231 4g26_A Pentatricopeptide repea 95.3 0.15 5.2E-06 47.3 11.6 81 133-216 119-202 (501)
232 1b89_A Protein (clathrin heavy 95.3 0.0078 2.7E-07 56.0 2.7 85 127-213 215-306 (449)
233 3ffl_A Anaphase-promoting comp 95.2 0.044 1.5E-06 44.5 6.6 55 162-218 29-92 (167)
234 4h7y_A Dual specificity protei 94.9 0.063 2.2E-06 43.2 6.6 59 133-192 74-132 (161)
235 4gns_B Protein CSD3, chitin bi 94.6 0.12 4E-06 51.0 9.1 58 156-215 340-397 (754)
236 1ya0_A SMG-7 transcript varian 94.1 0.17 5.8E-06 47.4 8.8 62 155-218 154-215 (497)
237 4g26_A Pentatricopeptide repea 94.1 0.75 2.6E-05 42.6 13.0 84 132-218 83-169 (501)
238 1zbp_A Hypothetical protein VP 93.9 0.15 5.1E-06 44.4 7.2 55 166-221 9-63 (273)
239 3mkq_A Coatomer beta'-subunit; 92.3 0.63 2.1E-05 43.7 9.7 65 149-214 677-761 (814)
240 3kae_A CDC27, possible protein 91.5 4 0.00014 33.8 12.3 57 162-220 71-145 (242)
241 3mkq_B Coatomer subunit alpha; 91.2 0.84 2.9E-05 37.1 8.0 78 132-215 18-115 (177)
242 4b4t_R RPN7, 26S proteasome re 90.1 0.56 1.9E-05 42.5 6.7 93 125-218 137-237 (429)
243 3mkq_B Coatomer subunit alpha; 89.4 1.8 6.1E-05 35.2 8.5 54 152-215 7-60 (177)
244 3txn_A 26S proteasome regulato 88.0 0.93 3.2E-05 41.2 6.6 91 127-218 107-210 (394)
245 2ff4_A Probable regulatory pro 87.9 0.75 2.6E-05 41.1 5.8 66 130-197 182-254 (388)
246 3mkq_A Coatomer beta'-subunit; 85.3 2 7E-05 40.1 7.5 53 125-178 687-747 (814)
247 3spa_A Mtrpol, DNA-directed RN 84.3 7.1 0.00024 40.0 11.2 86 130-218 138-230 (1134)
248 4gns_B Protein CSD3, chitin bi 84.2 2.3 7.7E-05 41.9 7.5 88 135-223 265-371 (754)
249 4b4t_P 26S proteasome regulato 83.1 7.3 0.00025 35.4 10.1 91 126-218 144-247 (445)
250 4fhn_B Nucleoporin NUP120; pro 77.3 2.3 7.8E-05 43.2 5.0 87 126-214 849-963 (1139)
251 2v6y_A AAA family ATPase, P60 75.7 3.7 0.00013 28.9 4.4 18 165-182 22-39 (83)
252 4b4t_S RPN3, 26S proteasome re 74.5 4 0.00014 38.5 5.5 70 149-221 226-302 (523)
253 2w2u_A Hypothetical P60 katani 74.0 4.2 0.00014 28.7 4.3 18 165-182 30-47 (83)
254 3esl_A Checkpoint serine/threo 70.6 28 0.00094 28.7 9.1 77 140-219 58-145 (202)
255 1wy6_A Hypothetical protein ST 70.4 28 0.00094 27.7 8.6 80 133-218 75-154 (172)
256 2o8p_A 14-3-3 domain containin 69.3 27 0.00093 29.3 8.9 49 134-182 140-196 (227)
257 2npm_A 14-3-3 domain containin 66.3 38 0.0013 28.9 9.4 48 171-218 173-227 (260)
258 1wfd_A Hypothetical protein 15 66.0 14 0.00049 26.4 5.8 44 134-186 11-54 (93)
259 1qsa_A Protein (soluble lytic 65.8 30 0.001 32.9 9.6 80 135-217 268-347 (618)
260 4a5x_A MITD1, MIT domain-conta 64.9 11 0.00039 26.6 5.0 19 165-183 27-45 (86)
261 2npm_A 14-3-3 domain containin 64.6 18 0.0006 31.0 7.0 47 136-182 173-226 (260)
262 3kae_A CDC27, possible protein 64.5 27 0.00093 28.8 7.7 62 128-190 71-150 (242)
263 2v6y_A AAA family ATPase, P60 64.5 12 0.00042 26.1 5.1 45 135-188 8-52 (83)
264 2w2u_A Hypothetical P60 katani 64.2 12 0.00043 26.2 5.1 45 135-188 16-60 (83)
265 1o9d_A 14-3-3-like protein C; 63.6 45 0.0015 28.4 9.4 47 171-217 152-206 (260)
266 1wfd_A Hypothetical protein 15 62.5 9.1 0.00031 27.4 4.1 27 156-183 18-44 (93)
267 3txn_A 26S proteasome regulato 61.8 44 0.0015 30.0 9.5 60 157-218 103-168 (394)
268 4b4t_R RPN7, 26S proteasome re 60.9 13 0.00046 33.3 5.9 64 153-218 131-197 (429)
269 2br9_A 14-3-3E, 14-3-3 protein 60.5 11 0.00037 31.8 4.9 47 136-182 147-201 (234)
270 3ubw_A 14-3-3E, 14-3-3 protein 60.3 57 0.002 27.9 9.4 47 171-217 173-227 (261)
271 4b4t_S RPN3, 26S proteasome re 58.0 8.4 0.00029 36.3 4.1 56 129-187 241-303 (523)
272 1o9d_A 14-3-3-like protein C; 56.9 13 0.00046 31.8 4.9 47 136-182 152-206 (260)
273 3esl_A Checkpoint serine/threo 55.7 36 0.0012 28.0 7.1 50 135-185 95-146 (202)
274 4a5x_A MITD1, MIT domain-conta 55.1 20 0.00069 25.2 4.8 44 135-187 13-56 (86)
275 3iqu_A 14-3-3 protein sigma; s 55.0 15 0.00052 31.0 4.8 48 135-182 149-204 (236)
276 3uzd_A 14-3-3 protein gamma; s 53.8 16 0.00056 31.0 4.9 47 136-182 148-202 (248)
277 1wy6_A Hypothetical protein ST 53.0 45 0.0016 26.5 6.9 51 133-184 105-155 (172)
278 3ubw_A 14-3-3E, 14-3-3 protein 53.0 17 0.00058 31.2 4.9 47 136-182 173-227 (261)
279 2br9_A 14-3-3E, 14-3-3 protein 51.9 45 0.0015 27.9 7.3 47 171-217 147-201 (234)
280 2cpt_A SKD1 protein, vacuolar 51.0 34 0.0012 25.5 5.8 48 134-190 14-61 (117)
281 3efz_A 14-3-3 protein; 14-3-3, 50.6 25 0.00086 30.2 5.6 48 136-183 169-226 (268)
282 2wvi_A Mitotic checkpoint seri 50.3 43 0.0015 26.5 6.6 46 173-219 79-126 (164)
283 4a1g_A Mitotic checkpoint seri 49.5 48 0.0017 25.9 6.7 46 173-219 84-131 (152)
284 2v6x_A Vacuolar protein sortin 49.4 22 0.00077 24.6 4.3 33 134-182 9-41 (85)
285 4fhn_B Nucleoporin NUP120; pro 48.3 77 0.0026 32.0 9.6 73 146-220 835-930 (1139)
286 3iqu_A 14-3-3 protein sigma; s 48.2 55 0.0019 27.5 7.2 47 171-217 150-204 (236)
287 2crb_A Nuclear receptor bindin 48.0 32 0.0011 25.0 5.0 29 153-182 15-43 (97)
288 2ijq_A Hypothetical protein; s 46.7 1E+02 0.0036 24.2 8.5 55 162-218 41-104 (161)
289 3uzd_A 14-3-3 protein gamma; s 46.4 61 0.0021 27.4 7.3 47 171-217 148-202 (248)
290 2cpt_A SKD1 protein, vacuolar 46.0 68 0.0023 23.8 6.8 26 157-183 22-47 (117)
291 4a1g_A Mitotic checkpoint seri 45.4 65 0.0022 25.1 6.9 48 138-186 84-133 (152)
292 4aez_C MAD3, mitotic spindle c 45.2 66 0.0022 26.8 7.2 47 172-219 132-180 (223)
293 4aez_C MAD3, mitotic spindle c 44.7 53 0.0018 27.4 6.6 49 137-186 132-182 (223)
294 3spa_A Mtrpol, DNA-directed RN 44.7 1.1E+02 0.0039 31.4 10.1 62 154-218 128-194 (1134)
295 3ax2_A Mitochondrial import re 44.6 63 0.0021 22.2 5.9 36 158-194 22-57 (73)
296 2i7u_A Four-alpha-helix bundle 44.2 4.6 0.00016 26.2 -0.0 6 96-101 25-30 (62)
297 4gq2_M Nucleoporin NUP120; bet 43.3 1.3E+02 0.0044 29.9 10.2 73 144-218 831-926 (950)
298 3re2_A Predicted protein; meni 41.9 98 0.0034 28.2 8.2 45 173-218 276-325 (472)
299 2cfu_A SDSA1; SDS-hydrolase, l 38.6 61 0.0021 30.9 6.8 46 156-203 452-497 (658)
300 2dl1_A Spartin; SPG20, MIT, st 37.3 26 0.00089 26.4 3.2 25 157-182 26-50 (116)
301 2v6x_A Vacuolar protein sortin 36.9 58 0.002 22.4 4.8 8 173-180 13-20 (85)
302 3t5x_A PCI domain-containing p 36.6 89 0.003 25.1 6.6 24 129-152 24-47 (203)
303 2cr7_A Paired amphipathic heli 36.5 67 0.0023 22.2 5.1 63 133-195 8-70 (80)
304 2wpv_A GET4, UPF0363 protein Y 36.1 90 0.0031 27.1 7.0 65 151-216 132-215 (312)
305 2oc5_A Hypothetical protein; D 34.9 1.1E+02 0.0037 25.4 6.7 58 136-197 47-104 (244)
306 3efz_A 14-3-3 protein; 14-3-3, 34.7 50 0.0017 28.4 5.0 48 171-218 169-226 (268)
307 2wvi_A Mitotic checkpoint seri 34.1 76 0.0026 25.1 5.6 48 138-186 79-128 (164)
308 3u84_A Menin; MLL, JUND, ledgf 33.8 1.5E+02 0.0051 27.6 8.1 45 173-218 298-347 (550)
309 4gq2_M Nucleoporin NUP120; bet 32.3 41 0.0014 33.4 4.6 52 159-216 816-867 (950)
310 3s6n_M SurviVal motor neuron p 31.7 70 0.0024 19.1 3.7 13 205-217 18-30 (37)
311 4gq4_A Menin; tumor suppressor 31.6 1.4E+02 0.0049 27.5 7.6 65 152-218 261-332 (489)
312 2rpa_A Katanin P60 ATPase-cont 31.0 45 0.0015 23.2 3.4 24 158-182 17-40 (78)
313 4b4t_P 26S proteasome regulato 30.0 2.6E+02 0.0087 24.9 9.2 62 154-217 138-205 (445)
314 2crb_A Nuclear receptor bindin 28.7 96 0.0033 22.5 4.8 23 169-192 37-59 (97)
315 2ca5_A MXIH; transport protein 27.4 67 0.0023 22.8 3.7 27 169-195 25-51 (85)
316 4b4t_O 26S proteasome regulato 27.2 3.2E+02 0.011 23.9 10.4 85 132-217 89-197 (393)
317 3re2_A Predicted protein; meni 27.0 1.1E+02 0.0039 27.8 6.1 59 138-197 276-345 (472)
318 3ax2_A Mitochondrial import re 26.8 46 0.0016 22.9 2.8 28 130-157 28-55 (73)
319 2p58_C Putative type III secre 26.6 2E+02 0.0068 21.4 6.7 73 133-214 21-94 (116)
320 2wpv_A GET4, UPF0363 protein Y 25.8 1.5E+02 0.0051 25.7 6.6 27 186-213 132-158 (312)
321 3lew_A SUSD-like carbohydrate 25.5 1.9E+02 0.0066 26.1 7.6 47 171-218 175-232 (495)
322 1om2_A Protein (mitochondrial 25.4 96 0.0033 22.4 4.4 48 133-192 11-58 (95)
323 3u84_A Menin; MLL, JUND, ledgf 25.4 1.2E+02 0.0043 28.1 6.1 59 138-197 298-367 (550)
324 2czy_A Paired amphipathic heli 25.1 1.6E+02 0.0056 19.9 7.2 61 134-194 3-63 (77)
325 2cwy_A Hypothetical protein TT 23.3 2E+02 0.0068 20.3 6.5 56 160-218 8-68 (94)
326 2uwj_G Type III export protein 23.1 2E+02 0.0067 21.4 5.7 74 133-215 20-94 (115)
327 3t5v_B Nuclear mRNA export pro 22.6 1.1E+02 0.0038 28.0 5.3 83 134-218 141-249 (455)
328 3kez_A Putative sugar binding 22.0 2.3E+02 0.0078 25.3 7.3 47 171-218 171-225 (461)
329 3myv_A SUSD superfamily protei 21.5 2.7E+02 0.0091 24.7 7.7 48 170-218 164-219 (454)
330 2vkj_A TM1634; membrane protei 21.0 78 0.0027 23.0 3.1 19 198-217 63-81 (106)
331 3mv2_A Coatomer subunit alpha; 20.6 3.4E+02 0.012 23.7 7.8 91 129-221 124-239 (325)
332 3lew_A SUSD-like carbohydrate 20.5 2.6E+02 0.0089 25.2 7.4 49 135-184 174-233 (495)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.71 E-value=8.7e-17 Score=123.21 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=89.3
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...|+|++|+.+|+++++++|.++.++.++|.++. .++++++|+..|+++++++|+++.++..+|.++.. .|++
T Consensus 20 G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~ 97 (126)
T 4gco_A 20 GNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLT-KLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA-MREW 97 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHH-hhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-CCCH
Confidence 456778899999999999999999999999999997666 68999999999999999999999999999988887 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+..|+++++++|+|
T Consensus 98 ~~A~~~~~~al~l~P~~ 114 (126)
T 4gco_A 98 SKAQRAYEDALQVDPSN 114 (126)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHCcCC
Confidence 99999999999999987
No 2
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.64 E-value=1.2e-15 Score=121.64 Aligned_cols=94 Identities=15% Similarity=0.153 Sum_probs=87.1
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..|...|++++|+.+|+++++++|+++.+|.++|.++. .+++|++|+.+|++|++++|+++.+++.+|.++.. .|+++
T Consensus 44 ~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~-lg~~~ 121 (151)
T 3gyz_A 44 YDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ-IKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR-LKAPL 121 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH-cCCHH
Confidence 44566789999999999999999999999999997666 68999999999999999999999999999988887 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|++++++.|++
T Consensus 122 eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 122 KAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHhCCCH
Confidence 9999999999999863
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.62 E-value=1.7e-15 Score=118.64 Aligned_cols=95 Identities=15% Similarity=0.216 Sum_probs=84.8
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|.+|...++|++|+.+|+++++++|+++.+|.++|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .+++
T Consensus 38 a~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~ 115 (150)
T 4ga2_A 38 AKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYE-LEENTDKAVECYRRSVELNPTQKDLVLKIAELLCK-NDVT 115 (150)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HCSS
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCh
Confidence 467788899999999999999999999999999996665 68999999999999999999999999999988887 8888
Q ss_pred HHHHHH-HHHHHHhCCCC
Q 027439 206 SRAESY-FDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~-fekAL~l~Pdn 222 (223)
++|... +++|++++|+|
T Consensus 116 ~~aa~~~~~~al~l~P~~ 133 (150)
T 4ga2_A 116 DGRAKYWVERAAKLFPGS 133 (150)
T ss_dssp SSHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHhCcCC
Confidence 776654 69999999986
No 4
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.60 E-value=6.5e-15 Score=115.32 Aligned_cols=95 Identities=22% Similarity=0.273 Sum_probs=88.5
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...++|++|+.+|+++++++|+++.++.++|.+++ .++++++|+.+|+++++++|+++.++..+|.+++. .|++
T Consensus 18 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~ 95 (164)
T 3sz7_A 18 GNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYS-ASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFD-MADY 95 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccCH
Confidence 345667899999999999999999999999999997666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++++|++
T Consensus 96 ~~A~~~~~~al~~~p~~ 112 (164)
T 3sz7_A 96 KGAKEAYEKGIEAEGNG 112 (164)
T ss_dssp HHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 99999999999999986
No 5
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.60 E-value=6.4e-15 Score=110.06 Aligned_cols=92 Identities=21% Similarity=0.094 Sum_probs=85.8
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+.+|+++++++|+++.++.++|.++. .++++++|+..|+++++++|+++.++..+|.++.. .|++
T Consensus 11 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~ 88 (126)
T 3upv_A 11 GKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEY 88 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-HhCH
Confidence 345667889999999999999999999999999997666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhC
Q 027439 206 SRAESYFDQAVKAA 219 (223)
Q Consensus 206 eeAi~~fekAL~l~ 219 (223)
++|+..|+++++++
T Consensus 89 ~~A~~~~~~al~~~ 102 (126)
T 3upv_A 89 ASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999998
No 6
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.58 E-value=8.4e-15 Score=111.84 Aligned_cols=94 Identities=19% Similarity=0.322 Sum_probs=84.3
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDG-------NVLSMYGDLI 198 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~-------~~l~~lA~ll 198 (223)
|..|...++|++|+.+|+++++++|+++.++.++|.++. .+++|++|+..|+++++++|++. .++..+|.++
T Consensus 15 G~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~ 93 (127)
T 4gcn_A 15 GNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYF-EEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAF 93 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHH-HhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHH
Confidence 456777899999999999999999999999999997666 58999999999999999998763 5778888777
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCC
Q 027439 199 WQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 199 ~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
.. .+++++|+.+|++++...|+
T Consensus 94 ~~-~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 94 QK-QNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HH-TTCHHHHHHHHHHHHHHSCC
T ss_pred HH-cCCHHHHHHHHHHHHhhCcC
Confidence 77 99999999999999998876
No 7
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.58 E-value=1.2e-14 Score=114.02 Aligned_cols=94 Identities=12% Similarity=0.023 Sum_probs=86.9
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..|...+++++|+.+|+++++++|.++.+|.++|.++. ..+++++|+.+|++++.++|+++.+++.+|.++.. .|+++
T Consensus 29 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~ 106 (148)
T 2vgx_A 29 FNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQ-AMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ-XGELA 106 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH-cCCHH
Confidence 44566789999999999999999999999999997666 58999999999999999999999999999988887 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|+++++++|++
T Consensus 107 ~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 107 EAESGLFLAQELIANX 122 (148)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCcCC
Confidence 9999999999998864
No 8
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.58 E-value=9.9e-15 Score=112.30 Aligned_cols=94 Identities=16% Similarity=0.031 Sum_probs=86.8
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..+...+++++|+.+|+++++.+|+++.+|.++|.++. ..+++++|+.+|++++.++|+++.+++.+|.++.. .|+++
T Consensus 26 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~ 103 (142)
T 2xcb_A 26 FNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQ-SLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ-LGDLD 103 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH-cCCHH
Confidence 44566789999999999999999999999999997666 68999999999999999999999999999988887 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|+++++++|++
T Consensus 104 ~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 104 GAESGFYSARALAAAQ 119 (142)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999998864
No 9
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.57 E-value=8.7e-15 Score=111.04 Aligned_cols=94 Identities=12% Similarity=-0.018 Sum_probs=82.8
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..+...+++++|+.+|+++++.+|+++.+|..+|.++. ..+++++|+.+|++|++++|+++.++..+|.++.. .|+++
T Consensus 25 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~-~g~~~ 102 (121)
T 1hxi_A 25 LSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-EHNAN 102 (121)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHH
Confidence 34556789999999999999999999999999997666 58999999999999999999999999999988777 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+..|+++++++|++
T Consensus 103 ~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 103 AALASLRAWLLSQPQY 118 (121)
T ss_dssp HHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHhCcCC
Confidence 9999999999999975
No 10
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.55 E-value=5e-15 Score=116.00 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=87.5
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKD 204 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~ 204 (223)
-|.+|...+++++|++.|++++..+|+++..+.++|.+++ ..++|++|+++|+++++++|+++.++..+|.++.. .|+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~ 80 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYY-EAKEYDLAKKYICTYINVQERDPKAHRFLGLLYEL-EEN 80 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTC
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCc
Confidence 4677888899999999999999999999999999997776 58999999999999999999999999999988887 999
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 027439 205 ASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 205 ~eeAi~~fekAL~l~Pdn 222 (223)
+++|+.+|+++++++|++
T Consensus 81 ~~~A~~~~~~al~~~p~~ 98 (150)
T 4ga2_A 81 TDKAVECYRRSVELNPTQ 98 (150)
T ss_dssp HHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHhCCCC
Confidence 999999999999999986
No 11
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.55 E-value=1.4e-14 Score=113.21 Aligned_cols=95 Identities=17% Similarity=0.126 Sum_probs=87.3
Q ss_pred cccccCCCChHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQA------------------DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND 187 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLel------------------dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d 187 (223)
|..|...++|++|+.+|++++++ +|.+..++.++|.++. .+++|++|+.+|++|+.++|++
T Consensus 18 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~~al~~~p~~ 96 (162)
T 3rkv_A 18 GNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL-NIGDLHEAEETSSEVLKREETN 96 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHhcCCcc
Confidence 34566778999999999999999 7888899999997666 6899999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 188 GNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 188 ~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+.+++.+|.+++. .|++++|+..|+++++++|+|
T Consensus 97 ~~a~~~~g~~~~~-~g~~~~A~~~~~~al~l~p~~ 130 (162)
T 3rkv_A 97 EKALFRRAKARIA-AWKLDEAEEDLKLLLRNHPAA 130 (162)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHH-HhcHHHHHHHHHHHHhcCCCC
Confidence 9999999988888 999999999999999999975
No 12
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.52 E-value=2e-14 Score=117.13 Aligned_cols=93 Identities=9% Similarity=0.044 Sum_probs=84.7
Q ss_pred cccCCCChHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHhCCHHHHHHHHHHHHHh-------CCCCH
Q 027439 128 WDPNNHGNNSTDLYYQKMIQADPR-------NPL-----LLSNYARFLKEARGDLLKAEEYCARAILM-------SPNDG 188 (223)
Q Consensus 128 ~Y~~~gd~~eA~~~y~~aLeldP~-------n~~-----~l~nlA~~l~~~~gdyeeA~~~~ekAL~l-------dP~d~ 188 (223)
.+...|+|++|+.+|+++++++|+ +.. +|.|+|.++. .+++|++|+..|++||++ +|+++
T Consensus 20 ~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~-~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~ 98 (159)
T 2hr2_A 20 RQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALA-GLRSFDEALHSADKALHYFNRRGELNQDEG 98 (159)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHCCTTSTHH
T ss_pred HHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccccCCCchH
Confidence 345568999999999999999999 544 9999996666 699999999999999999 99999
Q ss_pred HHH----HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 189 NVL----SMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 189 ~~l----~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.+| ++.|.++.. +|++++|+..|++|++++|+|
T Consensus 99 ~A~~~~~~~rG~aL~~-lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 99 KLWISAVYSRALALDG-LGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhHHHHHHH-CCCHHHHHHHHHHHHhcCCCc
Confidence 999 999988877 999999999999999999876
No 13
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.52 E-value=6.6e-14 Score=104.80 Aligned_cols=94 Identities=15% Similarity=0.115 Sum_probs=86.9
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+.+|+++++.+|.++.++.++|.++. .++++++|+.+|++++.++|+++.++..+|.+++. .|++
T Consensus 16 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~ 93 (137)
T 3q49_B 16 GNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESY 93 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-HhhH
Confidence 345667789999999999999999999999999996666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhCCC
Q 027439 206 SRAESYFDQAVKAAPD 221 (223)
Q Consensus 206 eeAi~~fekAL~l~Pd 221 (223)
++|+.+|+++++++|+
T Consensus 94 ~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 94 DEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHChh
Confidence 9999999999999876
No 14
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.51 E-value=2.1e-13 Score=97.74 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=87.0
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..|...+++++|+.+|+++++.+|.++.++.++|.++. ..+++++|+.++++++..+|+++.++..+|.++.. .|+++
T Consensus 12 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~ 89 (118)
T 1elw_A 12 NKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYA-KKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF-LNRFE 89 (118)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HhhHH
Confidence 44566789999999999999999999999999997666 58999999999999999999999999999988887 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|+++++.+|++
T Consensus 90 ~A~~~~~~~~~~~~~~ 105 (118)
T 1elw_A 90 EAKRTYEEGLKHEANN 105 (118)
T ss_dssp HHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHcCCCC
Confidence 9999999999999875
No 15
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.50 E-value=6.6e-14 Score=114.64 Aligned_cols=93 Identities=13% Similarity=0.139 Sum_probs=86.4
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHH
Q 027439 128 WDPNNHGNNSTDLYYQKMIQADPRNPLLLSN----------------YARFLKEARGDLLKAEEYCARAILMSPNDGNVL 191 (223)
Q Consensus 128 ~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~n----------------lA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l 191 (223)
.+...+++++|+.+|+++++++|+++.++.. +|.++. ..+++++|+.+|+++++++|+++.++
T Consensus 13 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~ 91 (208)
T 3urz_A 13 AAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYK-KNRNYDKAYLFYKELLQKAPNNVDCL 91 (208)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 3456789999999999999999999999999 996666 68999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 192 SMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 192 ~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
..+|.+++. .|++++|+.+|+++++++|++
T Consensus 92 ~~lg~~~~~-~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 92 EACAEMQVC-RGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHHcCCCC
Confidence 999988888 999999999999999999986
No 16
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.50 E-value=3.4e-14 Score=105.83 Aligned_cols=89 Identities=16% Similarity=0.189 Sum_probs=80.1
Q ss_pred CCChHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 027439 132 NHGNNSTDLYYQKMIQA---DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRA 208 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLel---dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeA 208 (223)
.+++++|+.+|++++++ +|+++.++.++|.++. .+++|++|+.+|+++++++|+++.++..+|.+++. .|++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFR-TLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-LGRYEQG 80 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-cCCHHHH
Confidence 46899999999999999 6999999999997666 58999999999999999999999999999988887 9999999
Q ss_pred HHHHHHHHHhCCCC
Q 027439 209 ESYFDQAVKAAPDD 222 (223)
Q Consensus 209 i~~fekAL~l~Pdn 222 (223)
+.+|+++++..|++
T Consensus 81 ~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 81 VELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999998875
No 17
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.49 E-value=1.5e-13 Score=101.12 Aligned_cols=95 Identities=17% Similarity=0.147 Sum_probs=87.5
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+.+|+++++.+|.+..++.++|.++. ..+++++|+.+|+++++++|+++.++..+|.+++. .|++
T Consensus 23 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~ 100 (133)
T 2lni_A 23 GNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYT-KLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA-MKDY 100 (133)
T ss_dssp HHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-HhhH
Confidence 445567799999999999999999999999999996665 58999999999999999999999999999988887 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++.+|++
T Consensus 101 ~~A~~~~~~~~~~~p~~ 117 (133)
T 2lni_A 101 TKAMDVYQKALDLDSSC 117 (133)
T ss_dssp HHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 99999999999999875
No 18
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.49 E-value=1.9e-13 Score=97.40 Aligned_cols=95 Identities=15% Similarity=0.065 Sum_probs=87.8
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHc-
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPN--DGNVLSMYGDLIWQSH- 202 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~--d~~~l~~lA~ll~~~~- 202 (223)
|.+|...+++++|+.+|+++++.+|.+..++.++|.++. ..+++++|+.+|+++++.+|+ +..++..+|.++.. .
T Consensus 13 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~-~~ 90 (112)
T 2kck_A 13 GVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALY-NLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY-IE 90 (112)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT-CS
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-Hh
Confidence 456677899999999999999999999999999997666 589999999999999999999 99999999988777 9
Q ss_pred CCHHHHHHHHHHHHHhCCCC
Q 027439 203 KDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 203 G~~eeAi~~fekAL~l~Pdn 222 (223)
|++++|+.+|++++...|++
T Consensus 91 ~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 91 GKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp SCSHHHHHHHHHHGGGCCCC
T ss_pred CCHHHHHHHHHHHhhcccCC
Confidence 99999999999999999875
No 19
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.9e-13 Score=101.58 Aligned_cols=95 Identities=18% Similarity=0.083 Sum_probs=87.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRN---PLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSH 202 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n---~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~ 202 (223)
|..|...+++++|+.+|+++++.+|++ ..++.++|.++. ..+++++|+.+|++++.++|+++.++..+|.+++. .
T Consensus 35 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~ 112 (148)
T 2dba_A 35 GNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHL-KLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK-L 112 (148)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH-H
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH-c
Confidence 455566799999999999999999998 899999996666 58999999999999999999999999999988887 9
Q ss_pred CCHHHHHHHHHHHHHhCCCC
Q 027439 203 KDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 203 G~~eeAi~~fekAL~l~Pdn 222 (223)
+++++|+.+|+++++++|++
T Consensus 113 ~~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 113 GRLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp TCHHHHHHHHHHHHHHCSSC
T ss_pred CCHHHHHHHHHHHHHcCCCc
Confidence 99999999999999999975
No 20
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.48 E-value=5.3e-13 Score=97.10 Aligned_cols=94 Identities=21% Similarity=0.330 Sum_probs=87.0
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..|...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.++++++..+|+++.++..+|.+++. .++++
T Consensus 20 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 97 (131)
T 2vyi_A 20 NEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYS-KLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS-LNKHV 97 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH-hCCHH
Confidence 44556789999999999999999999999999997666 58999999999999999999999999999988888 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|+++++.+|++
T Consensus 98 ~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 98 EAVAYYKKALELDPDN 113 (131)
T ss_dssp HHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHhcCccc
Confidence 9999999999999975
No 21
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.48 E-value=1.5e-13 Score=108.25 Aligned_cols=94 Identities=15% Similarity=0.038 Sum_probs=85.8
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..+...++++.|+..++++++++|.+..++..+|.++. .++++++|+++|+++++++|+++.++..+|.++.. .|+++
T Consensus 81 ~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~-~g~~~ 158 (184)
T 3vtx_A 81 SANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD-SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG-KGLRD 158 (184)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH-CCCHH
Confidence 34455679999999999999999999999999996666 68999999999999999999999999999988887 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|++|++++|++
T Consensus 159 ~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 159 EAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHhCCccC
Confidence 9999999999999864
No 22
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.47 E-value=4.6e-13 Score=99.17 Aligned_cols=94 Identities=13% Similarity=0.070 Sum_probs=86.3
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNP---LLLSNYARFLKEARGDLLKAEEYCARAILMSPND---GNVLSMYGDLIWQ 200 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~---~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d---~~~l~~lA~ll~~ 200 (223)
..+...+++++|+.+|+++++.+|+++ .++..+|.+++ ..+++++|+.+|++++..+|++ +.++..+|.+++.
T Consensus 10 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~ 88 (129)
T 2xev_A 10 FDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-ATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG 88 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH
Confidence 445667899999999999999999998 79999997666 5899999999999999999999 8999999988887
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC
Q 027439 201 SHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 201 ~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.|++++|+.+|+++++..|++
T Consensus 89 -~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 89 -EGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp -TTCHHHHHHHHHHHHHHSTTS
T ss_pred -cCCHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999975
No 23
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.47 E-value=1.8e-13 Score=111.42 Aligned_cols=90 Identities=18% Similarity=0.233 Sum_probs=81.5
Q ss_pred CCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 027439 131 NNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGD----------LLKAEEYCARAILMSPNDGNVLSMYGDLIWQ 200 (223)
Q Consensus 131 ~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gd----------yeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~ 200 (223)
+.+.|++|++.|+++++++|+++.+|+++|.++.. +++ +++|+..|++||+++|++..+++.+|.++..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~-l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE-LSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-hcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 34678999999999999999999999999976664 555 4699999999999999999999999988877
Q ss_pred Hc-----------CCHHHHHHHHHHHHHhCCCC
Q 027439 201 SH-----------KDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 201 ~~-----------G~~eeAi~~fekAL~l~Pdn 222 (223)
+ +++++|+.+|++|++++|++
T Consensus 93 -lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 93 -FAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp -HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred -hcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 5 48999999999999999986
No 24
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.46 E-value=2.3e-13 Score=112.13 Aligned_cols=95 Identities=15% Similarity=0.065 Sum_probs=87.9
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc---
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSH--- 202 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~--- 202 (223)
|..|...+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .
T Consensus 12 g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~~~~ 89 (217)
T 2pl2_A 12 GVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQL-KLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA-LYRQ 89 (217)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-hhhh
Confidence 345667789999999999999999999999999996666 68999999999999999999999999999988877 8
Q ss_pred --------CCHHHHHHHHHHHHHhCCCC
Q 027439 203 --------KDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 203 --------G~~eeAi~~fekAL~l~Pdn 222 (223)
|++++|+..|+++++++|++
T Consensus 90 ~~~~~~~~g~~~~A~~~~~~al~~~P~~ 117 (217)
T 2pl2_A 90 AEDRERGKGYLEQALSVLKDAERVNPRY 117 (217)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred hhhhcccccCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999986
No 25
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.46 E-value=7.7e-13 Score=101.07 Aligned_cols=95 Identities=15% Similarity=0.045 Sum_probs=87.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+.+|+++++.+|.+..++.++|.++. ..+++++|+.+|++++.++|+++.++..+|.++.. .|++
T Consensus 20 a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~ 97 (166)
T 1a17_A 20 ANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKF 97 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-hccH
Confidence 345566789999999999999999999999999996666 58999999999999999999999999999988877 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++++|++
T Consensus 98 ~~A~~~~~~a~~~~p~~ 114 (166)
T 1a17_A 98 RAALRDYETVVKVKPHD 114 (166)
T ss_dssp HHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 99999999999999975
No 26
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.45 E-value=3.3e-13 Score=132.21 Aligned_cols=95 Identities=21% Similarity=0.246 Sum_probs=64.8
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|.+|...|++++|+++|+++++++|+++.++.++|.++. .+|++++|+++|++|++++|+++.++.++|.++.. +|++
T Consensus 16 G~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~-~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~-~g~~ 93 (723)
T 4gyw_A 16 ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE-MQDV 93 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCH
Confidence 345556667777777777777777777777777775444 46777777777777777777777777777766555 6777
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|++|++++|++
T Consensus 94 ~~A~~~~~kAl~l~P~~ 110 (723)
T 4gyw_A 94 QGALQCYTRAIQINPAF 110 (723)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 77777777777776654
No 27
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.45 E-value=1.4e-12 Score=94.14 Aligned_cols=95 Identities=24% Similarity=0.399 Sum_probs=87.5
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
+..|...+++++|+.+|+++++.+|.+..++..+|.++. ..+++++|+.+|++++..+|+++.++..++.+++. .+++
T Consensus 16 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~ 93 (125)
T 1na0_A 16 GNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDY 93 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCH
Confidence 345667789999999999999999999999999997666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++.+|++
T Consensus 94 ~~A~~~~~~~~~~~~~~ 110 (125)
T 1na0_A 94 DEAIEYYQKALELDPNN 110 (125)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 99999999999999975
No 28
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.44 E-value=6.7e-13 Score=104.32 Aligned_cols=96 Identities=13% Similarity=0.173 Sum_probs=84.8
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDL--LKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK 203 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdy--eeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G 203 (223)
|.+|...+++++|+.+|+++++++|.++.++.++|.+++...+++ ++|+.+|+++++.+|+++.++..+|.+++. .|
T Consensus 51 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g 129 (177)
T 2e2e_A 51 GEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFM-QA 129 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cc
Confidence 345666789999999999999999999999999997745467898 999999999999999999999999988887 99
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q 027439 204 DASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 204 ~~eeAi~~fekAL~l~Pdn 222 (223)
++++|+.+|+++++++|++
T Consensus 130 ~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 130 NYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp CHHHHHHHHHHHHHTCCTT
T ss_pred cHHHHHHHHHHHHhhCCCC
Confidence 9999999999999998875
No 29
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.43 E-value=5.8e-13 Score=130.41 Aligned_cols=95 Identities=21% Similarity=0.183 Sum_probs=89.1
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|.+|...|++++|+++|+++++++|+++.++.++|.++. .++++++|+++|++|++++|+++.++..+|.++.. +|++
T Consensus 50 g~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~-~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~-~g~~ 127 (723)
T 4gyw_A 50 ASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK-EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD-SGNI 127 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCH
Confidence 456777899999999999999999999999999997776 58999999999999999999999999999988887 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|++|++++|++
T Consensus 128 ~eAi~~~~~Al~l~P~~ 144 (723)
T 4gyw_A 128 PEAIASYRTALKLKPDF 144 (723)
T ss_dssp HHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 99999999999999986
No 30
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.43 E-value=9.5e-13 Score=105.89 Aligned_cols=95 Identities=15% Similarity=0.072 Sum_probs=86.9
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNP----------------LLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGN 189 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~----------------~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~ 189 (223)
|..|...++|++|+.+|++++++.|.++ .++.++|.++. ..+++++|+.+|++++.++|+++.
T Consensus 45 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~ 123 (198)
T 2fbn_A 45 GNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYN-KNKDYPKAIDHASKVLKIDKNNVK 123 (198)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCcccHH
Confidence 3455567899999999999999999987 89999997666 589999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 190 VLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 190 ~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+++.+|.+++. .|++++|+.+|+++++++|++
T Consensus 124 ~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 124 ALYKLGVANMY-FGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHH-cccHHHHHHHHHHHHHHCCCc
Confidence 99999988887 999999999999999999975
No 31
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.42 E-value=6.8e-13 Score=108.56 Aligned_cols=97 Identities=14% Similarity=0.230 Sum_probs=85.7
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQS--- 201 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~--- 201 (223)
-|.+|...+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.+++..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQV-CRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 3566778899999999999999999999999999997666 589999999999999999999999999998775431
Q ss_pred -------------------------------cCCHHHHHHHHHHHHHhCCCC
Q 027439 202 -------------------------------HKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 202 -------------------------------~G~~eeAi~~fekAL~l~Pdn 222 (223)
.+++++|+.+|++|++++|++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 246889999999999999963
No 32
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.42 E-value=1e-12 Score=116.07 Aligned_cols=94 Identities=18% Similarity=0.139 Sum_probs=86.3
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRN---------------PLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVL 191 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n---------------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l 191 (223)
..|...+++++|+.+|+++++++|.+ ..++.++|.++. .+++|++|+.+|++|++++|+++.++
T Consensus 155 ~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~ 233 (336)
T 1p5q_A 155 TVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHL-KLQAFSAAIESCNKALELDSNNEKGL 233 (336)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 34445599999999999999999999 699999996666 68999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 192 SMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 192 ~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+.+|.+++. .|++++|+.+|+++++++|++
T Consensus 234 ~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~ 263 (336)
T 1p5q_A 234 SRRGEAHLA-VNDFELARADFQKVLQLYPNN 263 (336)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHH-CCCHHHHHHHHHHHHHHCCCC
Confidence 999988888 999999999999999999986
No 33
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.41 E-value=1.5e-12 Score=106.18 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=87.8
Q ss_pred cccccCCCChHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADP-RNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKD 204 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP-~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~ 204 (223)
|..|...+++++|+.+|+++++++| .+..++.++|.++. ..+++++|+.+|+++++.+|+++.++..+|.++.. .|+
T Consensus 14 g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~ 91 (228)
T 4i17_A 14 GNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCAD-NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD-MKN 91 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH-HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH-ccc
Confidence 4456678999999999999999999 99999999996666 68999999999999999999999999999988888 999
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 027439 205 ASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 205 ~eeAi~~fekAL~l~Pdn 222 (223)
+++|+..|+++++++|++
T Consensus 92 ~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 92 NQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp HHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHCCCc
Confidence 999999999999999986
No 34
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.40 E-value=1.3e-12 Score=107.57 Aligned_cols=91 Identities=15% Similarity=-0.018 Sum_probs=61.5
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEAR-----------GDLLKAEEYCARAILMSPNDGNVLSMYG 195 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~-----------gdyeeA~~~~ekAL~ldP~d~~~l~~lA 195 (223)
.+|...+++++|+.+|+++++++|+++.++.++|.++. .+ |++++|+..|+++++++|+++.++..+|
T Consensus 47 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg 125 (217)
T 2pl2_A 47 RTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYV-ALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRG 125 (217)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 34445567777777777777777777777777775444 45 6777777777777777777777777777
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhC
Q 027439 196 DLIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 196 ~ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
.++.. .|++++|+..|+++++++
T Consensus 126 ~~~~~-~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 126 LVYAL-LGERDKAEASLKQALALE 148 (217)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHH-cCChHHHHHHHHHHHhcc
Confidence 66555 677777777777766665
No 35
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.40 E-value=1.6e-12 Score=94.82 Aligned_cols=94 Identities=18% Similarity=0.309 Sum_probs=85.7
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND-------GNVLSMYGDLI 198 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d-------~~~l~~lA~ll 198 (223)
|..|...+++++|+.+|+++++.+|.++.++.++|.++. ..+++++|+.+|++++..+|++ +.++..+|.++
T Consensus 11 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 89 (131)
T 1elr_A 11 GNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYF-EKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSY 89 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Confidence 345667789999999999999999999999999997666 5899999999999999999887 99999999888
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCC
Q 027439 199 WQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 199 ~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
+. .|++++|+.+|+++++..|+
T Consensus 90 ~~-~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 90 FK-EEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HH-TTCHHHHHHHHHHHHHHCCC
T ss_pred HH-hccHHHHHHHHHHHHHhCCC
Confidence 87 99999999999999999884
No 36
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.40 E-value=2.6e-12 Score=101.13 Aligned_cols=94 Identities=15% Similarity=0.159 Sum_probs=60.6
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...|++++|+.+|+++++++|+++.++.++|.++. ..+++++|+..+++++..+|+++.++..++.++.. .+++
T Consensus 12 G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 89 (184)
T 3vtx_A 12 GDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYM-DIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFM-IDEK 89 (184)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH-cCCH
Confidence 456677789999999999999999999999888886654 46666666666665555555555555444444333 4444
Q ss_pred HHHHHHHHHHHHhCCC
Q 027439 206 SRAESYFDQAVKAAPD 221 (223)
Q Consensus 206 eeAi~~fekAL~l~Pd 221 (223)
+.|+..+++++.++|+
T Consensus 90 ~~a~~~~~~a~~~~~~ 105 (184)
T 3vtx_A 90 QAAIDALQRAIALNTV 105 (184)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCcc
Confidence 4444444444444443
No 37
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.38 E-value=1.1e-12 Score=112.65 Aligned_cols=95 Identities=15% Similarity=0.117 Sum_probs=87.6
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+.+|+++++.+|+++.++.++|.++. .++++++|+..|++|++++|++..++..+|.++.. .|++
T Consensus 11 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~ 88 (281)
T 2c2l_A 11 GNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESY 88 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCH
Confidence 345667889999999999999999999999999996666 68999999999999999999999999999988887 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++++|++
T Consensus 89 ~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 89 DEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCccc
Confidence 99999999999998864
No 38
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.37 E-value=2.9e-12 Score=94.41 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 027439 136 NSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQA 215 (223)
Q Consensus 136 ~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekA 215 (223)
++|+.+|+++++.+|+++.++.++|.++. ..+++++|+.+|++++.++|++..++..+|.++.. .|++++|+.+|+++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~~~a 79 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYA-EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-QGDRAGARQAWESG 79 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 46899999999999999999999996666 58999999999999999999999999999988887 99999999999999
Q ss_pred HHhCCC
Q 027439 216 VKAAPD 221 (223)
Q Consensus 216 L~l~Pd 221 (223)
++++|+
T Consensus 80 l~~~~~ 85 (115)
T 2kat_A 80 LAAAQS 85 (115)
T ss_dssp HHHHHH
T ss_pred HHhccc
Confidence 998763
No 39
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.37 E-value=1.7e-12 Score=117.89 Aligned_cols=94 Identities=13% Similarity=0.096 Sum_probs=82.3
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGD-LLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gd-yeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
.+|...+++++|+++|+++++++|++..+|.++|.++. .+++ +++|+.+|++|++++|++..+|..+|.++.. .|++
T Consensus 105 ~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~-~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~-~g~~ 182 (382)
T 2h6f_A 105 AVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLK-SLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW-LRDP 182 (382)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCC
T ss_pred HHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHH-HcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-ccCH
Confidence 34455678999999999999999999999999996666 5786 9999999999999999999999999988777 8999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+..|++|++++|+|
T Consensus 183 ~eAl~~~~kal~ldP~~ 199 (382)
T 2h6f_A 183 SQELEFIADILNQDAKN 199 (382)
T ss_dssp TTHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCccC
Confidence 99999999999999986
No 40
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.37 E-value=4.6e-12 Score=104.12 Aligned_cols=94 Identities=12% Similarity=0.094 Sum_probs=86.3
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
.+|...+++++|+.+|+++++.+|.++.++.++|.++. ..+++++|+.+|+++++++|+++.++..+|.+++. .|+++
T Consensus 51 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~g~~~ 128 (275)
T 1xnf_A 51 VLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLT-QAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY-GGRDK 128 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH-hccHH
Confidence 45566789999999999999999999999999997666 58999999999999999999999999999988888 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|+++++++|++
T Consensus 129 ~A~~~~~~a~~~~~~~ 144 (275)
T 1xnf_A 129 LAQDDLLAFYQDDPND 144 (275)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999999875
No 41
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.37 E-value=6e-12 Score=116.78 Aligned_cols=96 Identities=15% Similarity=0.035 Sum_probs=89.7
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKD 204 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~ 204 (223)
-|..|...+++++|+++|+++++++|+++.++.++|.++. .++++++|+++|++|++++|+++.++..+|.++.. +|+
T Consensus 12 lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~ 89 (477)
T 1wao_1 12 QANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGK 89 (477)
T ss_dssp SSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCC
Confidence 4567788899999999999999999999999999997666 58999999999999999999999999999988887 999
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 027439 205 ASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 205 ~eeAi~~fekAL~l~Pdn 222 (223)
+++|+.+|+++++++|++
T Consensus 90 ~~eA~~~~~~al~~~p~~ 107 (477)
T 1wao_1 90 FRAALRDYETVVKVKPHD 107 (477)
T ss_dssp HHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 999999999999999976
No 42
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.36 E-value=3.8e-12 Score=101.97 Aligned_cols=95 Identities=11% Similarity=0.040 Sum_probs=85.0
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH----------------H
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDG----------------N 189 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~----------------~ 189 (223)
|.+|...+++++|+.+|+++++++|.++.++.++|.++. ..+++++|+.+|++++++.|++. .
T Consensus 44 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 122 (213)
T 1hh8_A 44 GCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY-QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACE 122 (213)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchH
Confidence 455667889999999999999999999999999997666 58999999999999999888877 9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 190 VLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 190 ~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
++..+|.+++. .|++++|+.+|+++++++|++
T Consensus 123 ~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 123 VLYNIAFMYAK-KEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHTTCCSG
T ss_pred HHHHHHHHHHH-ccCHHHHHHHHHHHHHcCccc
Confidence 99999988887 999999999999999998864
No 43
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.36 E-value=2.3e-12 Score=118.56 Aligned_cols=95 Identities=16% Similarity=0.166 Sum_probs=85.0
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRN---------------PLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNV 190 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n---------------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~ 190 (223)
|..|...++|++|+.+|+++++++|.+ ..++.++|.++. .+++|++|+.+|++|++++|+++.+
T Consensus 275 G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a 353 (457)
T 1kt0_A 275 GTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYL-KLREYTKAVECCDKALGLDSANEKG 353 (457)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHH
Confidence 344556799999999999999999999 799999996666 6999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 191 LSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 191 l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
++.+|.+++. ++++++|+.+|++|++++|++
T Consensus 354 ~~~~g~a~~~-~g~~~~A~~~~~~al~l~P~~ 384 (457)
T 1kt0_A 354 LYRRGEAQLL-MNEFESAKGDFEKVLEVNPQN 384 (457)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCC
Confidence 9999988888 999999999999999999976
No 44
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.36 E-value=1.2e-12 Score=118.93 Aligned_cols=94 Identities=14% Similarity=0.075 Sum_probs=86.3
Q ss_pred ccccCCCC-hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 127 SWDPNNHG-NNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 127 ~~Y~~~gd-~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
.+|...++ +++|+.+|+++++++|++..+|.++|.++. .++++++|+.+|++||+++|++..+|..+|.++.. .|++
T Consensus 139 ~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~-~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~-~g~~ 216 (382)
T 2h6f_A 139 VLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE-WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE-FKLW 216 (382)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCC
T ss_pred HHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH-cCCh
Confidence 44455675 999999999999999999999999996666 58999999999999999999999999999988887 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++++|++
T Consensus 217 ~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 217 DNELQYVDQLLKEDVRN 233 (382)
T ss_dssp TTHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 99999999999999986
No 45
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.36 E-value=2.3e-12 Score=104.94 Aligned_cols=94 Identities=12% Similarity=0.075 Sum_probs=86.3
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDG-------NVLSMYGDLI 198 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~-------~~l~~lA~ll 198 (223)
|.+|...+++++|+.+|+++++.+|+++.++.++|.++. .++++++|+.+|+++++++|+++ .++..+|.++
T Consensus 49 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~ 127 (228)
T 4i17_A 49 GVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYR-DMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKF 127 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHH
Confidence 456677889999999999999999999999999997666 58999999999999999999999 6689999887
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCC
Q 027439 199 WQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 199 ~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
+. .|++++|+.+|+++++++|+
T Consensus 128 ~~-~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 128 QQ-AGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HH-TTCHHHHHHHHHHHTTSSCH
T ss_pred HH-hccHHHHHHHHHHHHhcCCC
Confidence 77 99999999999999999986
No 46
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.33 E-value=1.1e-11 Score=89.86 Aligned_cols=91 Identities=23% Similarity=0.372 Sum_probs=60.6
Q ss_pred ccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 027439 129 DPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRA 208 (223)
Q Consensus 129 Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeA 208 (223)
|...+++++|+.+|+++++.+|.+..++.++|.++. ..+++++|+.++++++..+|++..++..++.+++. .|++++|
T Consensus 45 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A 122 (136)
T 2fo7_A 45 YYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEA 122 (136)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-HccHHHH
Confidence 334456677777777777777776666666664444 46677777777777777777666666666666555 6777777
Q ss_pred HHHHHHHHHhCCC
Q 027439 209 ESYFDQAVKAAPD 221 (223)
Q Consensus 209 i~~fekAL~l~Pd 221 (223)
+.+|++++..+|+
T Consensus 123 ~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 123 IEYYQKALELDPR 135 (136)
T ss_dssp HHHHHHHHHHSTT
T ss_pred HHHHHHHHccCCC
Confidence 7777777766665
No 47
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.33 E-value=2.1e-12 Score=102.77 Aligned_cols=87 Identities=9% Similarity=0.056 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 027439 135 NNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQ 214 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fek 214 (223)
+-.+...|+++++++|+++.++.++|..++ ..|+|++|+.+|++++.++|+++.+|..+|.+++. .|++++|+..|++
T Consensus 18 ~~~~~~~l~~al~l~p~~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~-~g~~~~Ai~~~~~ 95 (151)
T 3gyz_A 18 AINSGATLKDINAIPDDMMDDIYSYAYDFY-NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI-KEQFQQAADLYAV 95 (151)
T ss_dssp HHHTSCCTGGGCCSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHCCCCHHHHhCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HccHHHHHHHHHH
Confidence 334445577788899999999999997666 58999999999999999999999999999988887 9999999999999
Q ss_pred HHHhCCCCC
Q 027439 215 AVKAAPDDW 223 (223)
Q Consensus 215 AL~l~Pdn~ 223 (223)
+++++|++.
T Consensus 96 al~l~P~~~ 104 (151)
T 3gyz_A 96 AFALGKNDY 104 (151)
T ss_dssp HHHHSSSCC
T ss_pred HHhhCCCCc
Confidence 999999874
No 48
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.32 E-value=9e-12 Score=100.95 Aligned_cols=92 Identities=21% Similarity=0.094 Sum_probs=84.3
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|.+|...+++++|+.+|+++++.+|.++.++.++|.++. ..+++++|+.+|+++++.+|+++.++..+|.++.. .|++
T Consensus 146 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~ 223 (258)
T 3uq3_A 146 GKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEY 223 (258)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-HhhH
Confidence 345666789999999999999999999999999996666 58999999999999999999999999999988887 9999
Q ss_pred HHHHHHHHHHHHhC
Q 027439 206 SRAESYFDQAVKAA 219 (223)
Q Consensus 206 eeAi~~fekAL~l~ 219 (223)
++|+.+|+++++++
T Consensus 224 ~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 224 ASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999998
No 49
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.32 E-value=3.6e-12 Score=114.78 Aligned_cols=95 Identities=18% Similarity=0.154 Sum_probs=87.0
Q ss_pred cccccCCCChHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQ----------------ADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGN 189 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLe----------------ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~ 189 (223)
|..|...++|++|+.+|+++++ .+|.+..++.++|.+++ .+++|++|+.+|++|++++|+++.
T Consensus 230 g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~ 308 (370)
T 1ihg_A 230 GNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKL-KMSDWQGAVDSCLEALEIDPSNTK 308 (370)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHhCchhHH
Confidence 3445567999999999999999 88889999999997666 689999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 190 VLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 190 ~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+++.+|.+++. .+++++|+.+|++|++++|++
T Consensus 309 a~~~lg~~~~~-~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 309 ALYRRAQGWQG-LKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCC
Confidence 99999988888 999999999999999999976
No 50
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.31 E-value=1.9e-11 Score=88.51 Aligned_cols=94 Identities=22% Similarity=0.352 Sum_probs=85.7
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..|...+++++|+.+|+++++.+|.+..++..++.++. ..+++++|+.++++++..+|++..++..++.++.. .|+++
T Consensus 9 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ 86 (136)
T 2fo7_A 9 NAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYD 86 (136)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHH-HhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-hcCHH
Confidence 34556689999999999999999999999999997666 58999999999999999999999999999988777 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|++++...|++
T Consensus 87 ~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 87 EAIEYYQKALELDPRS 102 (136)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999998864
No 51
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.31 E-value=2.9e-11 Score=92.68 Aligned_cols=93 Identities=12% Similarity=-0.001 Sum_probs=64.4
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 027439 128 WDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASR 207 (223)
Q Consensus 128 ~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ee 207 (223)
+|...+++++|+.+|+++++.+|.+..++.++|.++. ..+++++|+.++++++..+|+++.++..+|.+++. .|++++
T Consensus 51 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~ 128 (186)
T 3as5_A 51 AYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYV-QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDN-LGRFDE 128 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH-cCcHHH
Confidence 4445567777777777777777777777777775554 46777777777777777777777777777766665 777777
Q ss_pred HHHHHHHHHHhCCCC
Q 027439 208 AESYFDQAVKAAPDD 222 (223)
Q Consensus 208 Ai~~fekAL~l~Pdn 222 (223)
|+.+|+++++.+|++
T Consensus 129 A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 129 AIDSFKIALGLRPNE 143 (186)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhcCccc
Confidence 777777777766653
No 52
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.30 E-value=1.3e-11 Score=94.62 Aligned_cols=95 Identities=18% Similarity=0.062 Sum_probs=87.2
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
+.+|...+++++|+.+|+++++.+|.+..++..+|.++. ..+++++|+.++++++..+|+++.++..+|.+++. .|++
T Consensus 83 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~ 160 (186)
T 3as5_A 83 GLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALD-NLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ-MGRH 160 (186)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHH-HcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH-cCCH
Confidence 345566789999999999999999999999999997666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++.+|++
T Consensus 161 ~~A~~~~~~~~~~~~~~ 177 (186)
T 3as5_A 161 EEALPHFKKANELDEGA 177 (186)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 99999999999998875
No 53
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.30 E-value=3.5e-12 Score=99.74 Aligned_cols=84 Identities=8% Similarity=-0.087 Sum_probs=77.6
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027439 138 TDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVK 217 (223)
Q Consensus 138 A~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~ 217 (223)
+...|+++++++|++..++.++|..++ ..++|++|+.+|++++.++|+++.++..+|.++.. .|++++|+.+|++++.
T Consensus 6 ~~~~~~~al~~~p~~~~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQLYSLAFNQY-QSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp CCCSHHHHTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHhhHHHHHHHHHHHH-HcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 346789999999999999999997777 58999999999999999999999999999988887 9999999999999999
Q ss_pred hCCCCC
Q 027439 218 AAPDDW 223 (223)
Q Consensus 218 l~Pdn~ 223 (223)
++|++.
T Consensus 84 l~p~~~ 89 (148)
T 2vgx_A 84 MDIXEP 89 (148)
T ss_dssp HSTTCT
T ss_pred cCCCCc
Confidence 999873
No 54
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.30 E-value=3.4e-12 Score=112.90 Aligned_cols=95 Identities=19% Similarity=0.065 Sum_probs=82.6
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNP-----------------LLLSNYARFLKEARGDLLKAEEYCARAILMSPNDG 188 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~-----------------~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~ 188 (223)
|..|...++|++|+.+|+++++++|++. .++.++|.++. .+++|++|+.+|+++++++|++.
T Consensus 186 g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~ 264 (338)
T 2if4_A 186 GNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLI-KLKRYDEAIGHCNIVLTEEEKNP 264 (338)
T ss_dssp HHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCH
Confidence 4556677999999999999999999987 38999996666 68999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 189 NVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 189 ~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.+++.+|.+++. .|++++|+.+|+++++++|++
T Consensus 265 ~a~~~lg~a~~~-~g~~~~A~~~l~~al~l~p~~ 297 (338)
T 2if4_A 265 KALFRRGKAKAE-LGQMDSARDDFRKAQKYAPDD 297 (338)
T ss_dssp HHHHHHHHHHHT-TTCHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCCCC
Confidence 999999988877 999999999999999999876
No 55
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.29 E-value=1.3e-11 Score=96.88 Aligned_cols=93 Identities=10% Similarity=0.172 Sum_probs=80.8
Q ss_pred ccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH--H
Q 027439 129 DPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA--S 206 (223)
Q Consensus 129 Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~--e 206 (223)
+...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.+|++++.++|+++.++..+|.+++...+++ +
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~ 98 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYL-WQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTA 98 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchH
Confidence 455689999999999999999999999999997666 5899999999999999999999999999998834338998 9
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|+++++.+|++
T Consensus 99 ~A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 99 QTRAMIDKALALDSNE 114 (177)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhCCCc
Confidence 9999999999999976
No 56
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.28 E-value=3.2e-11 Score=104.27 Aligned_cols=95 Identities=13% Similarity=0.186 Sum_probs=77.5
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPR--NPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK 203 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~--n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G 203 (223)
+.+|...+++++|+.+|+++++++|. ++.++.++|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .|
T Consensus 184 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g 261 (365)
T 4eqf_A 184 SKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFH-LSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLAN-GD 261 (365)
T ss_dssp -----CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT
T ss_pred HHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC
Confidence 45667778889999999999999988 8888888886665 57899999999999999999888888888877777 88
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q 027439 204 DASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 204 ~~eeAi~~fekAL~l~Pdn 222 (223)
++++|+.+|+++++++|++
T Consensus 262 ~~~~A~~~~~~al~~~p~~ 280 (365)
T 4eqf_A 262 RSEEAVEAYTRALEIQPGF 280 (365)
T ss_dssp CHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHhcCCCc
Confidence 9999999999998888875
No 57
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.27 E-value=1.1e-11 Score=107.12 Aligned_cols=95 Identities=16% Similarity=0.014 Sum_probs=87.9
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|.+|...+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .|++
T Consensus 220 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~ 297 (365)
T 4eqf_A 220 GVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLA-NGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCIN-LGAY 297 (365)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCC
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH-CCCH
Confidence 456667799999999999999999999999999997666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++++|++
T Consensus 298 ~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 298 REAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCccc
Confidence 99999999999998763
No 58
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.27 E-value=2.6e-11 Score=97.84 Aligned_cols=92 Identities=15% Similarity=0.138 Sum_probs=47.7
Q ss_pred ccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHH
Q 027439 129 DPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRA 208 (223)
Q Consensus 129 Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeA 208 (223)
|...+++++|+.+|+++++.+|.+..++..+|.++. ..+++++|+.+|++++..+|+++.++..++.++.. .|++++|
T Consensus 135 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A 212 (243)
T 2q7f_A 135 LVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLA-NEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY-KENREKA 212 (243)
T ss_dssp HHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCTTHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-ccCHHHH
Confidence 334445555555555555555555555555553333 34555555555555555555555555555544444 5555555
Q ss_pred HHHHHHHHHhCCCC
Q 027439 209 ESYFDQAVKAAPDD 222 (223)
Q Consensus 209 i~~fekAL~l~Pdn 222 (223)
+.+|+++++++|++
T Consensus 213 ~~~~~~~~~~~p~~ 226 (243)
T 2q7f_A 213 LEMLDKAIDIQPDH 226 (243)
T ss_dssp HHHHHHHHHHCTTC
T ss_pred HHHHHHHHccCcch
Confidence 55555555555543
No 59
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.26 E-value=1.8e-11 Score=93.29 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=70.1
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 144 KMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 144 ~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
++..+||+.+..+.++|..++ ++|+|++|+.+|++|++++|+++.++..+|.+++. .|++++|+..|+++++++|++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~ 80 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYF-KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LMEFQRALDDCDTCIRLDSKF 80 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hccHHHHHHHHHHHHHhhhhh
Confidence 455689999999999998777 58999999999999999999999999999988888 999999999999999999986
No 60
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.26 E-value=6e-11 Score=95.67 Aligned_cols=95 Identities=14% Similarity=0.226 Sum_probs=75.2
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
+.+|...+++++|+.+|+++++.+|.+..++..+|.++. ..+++++|+.+|+++++.+|+++.++..+|.++.. .|++
T Consensus 64 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~ 141 (243)
T 2q7f_A 64 ANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYV-VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK-LEQP 141 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH-TSCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccH
Confidence 344556678888888888888888888888888885555 57888888888888888888888888888877766 8888
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++.+|++
T Consensus 142 ~~A~~~~~~~~~~~~~~ 158 (243)
T 2q7f_A 142 KLALPYLQRAVELNEND 158 (243)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 88888888888887764
No 61
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.25 E-value=2.7e-11 Score=103.87 Aligned_cols=93 Identities=13% Similarity=0.023 Sum_probs=53.7
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
.+|...+++++|+.+|+++++++|.++.++.++|.++. ..+++++|+.+|++++.++|+++.++..+|.++.. .|+++
T Consensus 225 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~ 302 (368)
T 1fch_A 225 VLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLA-NGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN-LGAHR 302 (368)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCCHH
Confidence 34444555666666666666666666666666664443 35666666666666666666666666666655555 56666
Q ss_pred HHHHHHHHHHHhCCC
Q 027439 207 RAESYFDQAVKAAPD 221 (223)
Q Consensus 207 eAi~~fekAL~l~Pd 221 (223)
+|+.+|+++++++|+
T Consensus 303 ~A~~~~~~al~~~~~ 317 (368)
T 1fch_A 303 EAVEHFLEALNMQRK 317 (368)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCC
Confidence 666666666655544
No 62
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.25 E-value=3.4e-11 Score=104.19 Aligned_cols=89 Identities=18% Similarity=0.108 Sum_probs=78.1
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH-HHH
Q 027439 132 NHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASR-AES 210 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ee-Ai~ 210 (223)
.+++++|+.+|+++++.+|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++.+++.++.. .|++++ |..
T Consensus 179 ~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~-~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~-~g~~~eaa~~ 256 (291)
T 3mkr_A 179 GEKLQDAYYIFQEMADKCSPTLLLLNGQAACHM-AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQH-LGKPPEVTNR 256 (291)
T ss_dssp TTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCCHHHHHH
Confidence 458999999999999999999999999995555 68999999999999999999999999999977777 888865 578
Q ss_pred HHHHHHHhCCCC
Q 027439 211 YFDQAVKAAPDD 222 (223)
Q Consensus 211 ~fekAL~l~Pdn 222 (223)
+++++++++|++
T Consensus 257 ~~~~~~~~~P~~ 268 (291)
T 3mkr_A 257 YLSQLKDAHRSH 268 (291)
T ss_dssp HHHHHHHHCTTC
T ss_pred HHHHHHHhCCCC
Confidence 999999999986
No 63
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.25 E-value=3.1e-11 Score=112.37 Aligned_cols=94 Identities=13% Similarity=0.160 Sum_probs=73.6
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..|...+++++|+++|+++++++|++..++.++|.++. .++++++|+++|+++++++|+++.++..+|.++.. .|+++
T Consensus 31 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~ 108 (568)
T 2vsy_A 31 DAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRW-TQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED-AGQAE 108 (568)
T ss_dssp HHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCHH
Confidence 34455678888888888888888888888888886555 47888888888888888888888888888877666 88888
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|+++++++|++
T Consensus 109 ~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 109 AAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 8888888888887765
No 64
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.24 E-value=5.8e-11 Score=101.81 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=88.2
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.+|+++++++|+++.++..+|.++.. .|++
T Consensus 71 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~ 148 (368)
T 1fch_A 71 GLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQA-ENEQELLAISALRRCLELKPDNQTALMALAVSFTN-ESLQ 148 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCH
Confidence 456667899999999999999999999999999997666 58999999999999999999999999999988887 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++.+|++
T Consensus 149 ~~A~~~~~~~~~~~~~~ 165 (368)
T 1fch_A 149 RQACEILRDWLRYTPAY 165 (368)
T ss_dssp HHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHHhCcCc
Confidence 99999999999999875
No 65
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.24 E-value=2.4e-11 Score=100.09 Aligned_cols=96 Identities=17% Similarity=0.265 Sum_probs=86.4
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKD 204 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~ 204 (223)
-|.+|...+++++|+.+|+++++.+|.++.++.++|.++. ..+++++|+.+|+++++++|+++.++..+|..++. .++
T Consensus 80 lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~ 157 (272)
T 3u4t_A 80 YGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFY-NKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY-NKE 157 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH-HHH
Confidence 3566777899999999999999999999999999997666 58999999999999999999999999999955666 679
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 027439 205 ASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 205 ~eeAi~~fekAL~l~Pdn 222 (223)
+++|+.+|+++++.+|++
T Consensus 158 ~~~A~~~~~~a~~~~p~~ 175 (272)
T 3u4t_A 158 YVKADSSFVKVLELKPNI 175 (272)
T ss_dssp HHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHhCccc
Confidence 999999999999999975
No 66
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.23 E-value=2.2e-11 Score=112.17 Aligned_cols=88 Identities=13% Similarity=-0.091 Sum_probs=83.5
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh--------CCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEAR--------GDLLKAEEYCARAILMSP---NDGNVLSMYGDLIWQS 201 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~--------gdyeeA~~~~ekAL~ldP---~d~~~l~~lA~ll~~~ 201 (223)
+++++|+.+|+++++++|+++.+|.++|.++. .. +++++|+.+|++|++++| +++.++..+|.+++.
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~- 270 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYL-SLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKY- 270 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH-
Confidence 89999999999999999999999999997666 57 899999999999999999 999999999988888
Q ss_pred cCCHHHHHHHHHHHHHhCCCC
Q 027439 202 HKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 202 ~G~~eeAi~~fekAL~l~Pdn 222 (223)
.|++++|+.+|+++++++|++
T Consensus 271 ~g~~~~A~~~~~~al~l~p~~ 291 (474)
T 4abn_A 271 EESYGEALEGFSQAAALDPAW 291 (474)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC
T ss_pred cCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999986
No 67
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.22 E-value=2.2e-11 Score=93.40 Aligned_cols=82 Identities=7% Similarity=-0.110 Sum_probs=73.3
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 027439 140 LYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 140 ~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
..|+++++++|++...+..+|..++ ..+++++|+.+|++++..+|+++.++..+|.++.. .|++++|+.+|++++.++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQY-QAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQS-LGLYEQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcC
Confidence 5788999999999999999997666 58999999999999999999999999999988887 999999999999999999
Q ss_pred CCCC
Q 027439 220 PDDW 223 (223)
Q Consensus 220 Pdn~ 223 (223)
|++.
T Consensus 83 p~~~ 86 (142)
T 2xcb_A 83 INEP 86 (142)
T ss_dssp TTCT
T ss_pred CCCc
Confidence 9873
No 68
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.22 E-value=5.1e-11 Score=96.45 Aligned_cols=95 Identities=17% Similarity=0.112 Sum_probs=84.2
Q ss_pred cccccCCCChHHHHHHHHHHHH--------------------------hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQ--------------------------ADPRNPLLLSNYARFLKEARGDLLKAEEYCAR 179 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLe--------------------------ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ek 179 (223)
|.+|...+++++|+.+|+++++ .+|.++.++.++|.++. ..+++++|+.+|++
T Consensus 86 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~ 164 (258)
T 3uq3_A 86 GNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYF-TKSDWPNAVKAYTE 164 (258)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHH-HhcCHHHHHHHHHH
Confidence 3455667788888888888888 77788899999997666 58999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 180 AILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 180 AL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
++..+|+++.++..+|.+++. .|++++|+.+|+++++.+|++
T Consensus 165 a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~ 206 (258)
T 3uq3_A 165 MIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNF 206 (258)
T ss_dssp HHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHhcCcccHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCHHH
Confidence 999999999999999988887 999999999999999999875
No 69
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.22 E-value=3.6e-11 Score=110.79 Aligned_cols=94 Identities=14% Similarity=0.094 Sum_probs=86.3
Q ss_pred cccccCCCCh-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc--
Q 027439 126 GSWDPNNHGN-NSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSH-- 202 (223)
Q Consensus 126 g~~Y~~~gd~-~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~-- 202 (223)
|..|...+++ ++|+.+|+++++++|+++.++.++|.++. .++++++|+.+|++|++++|+ ..++..+|.++.. .
T Consensus 109 g~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~-~~~ 185 (474)
T 4abn_A 109 GKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYW-KKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQ-LQT 185 (474)
T ss_dssp HHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTT-CCC
T ss_pred HHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHH-hcc
Confidence 3556667899 99999999999999999999999997666 589999999999999999998 7999999988777 8
Q ss_pred -------CCHHHHHHHHHHHHHhCCCC
Q 027439 203 -------KDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 203 -------G~~eeAi~~fekAL~l~Pdn 222 (223)
|++++|+.+|+++++++|++
T Consensus 186 ~~~~~~~g~~~~A~~~~~~al~~~p~~ 212 (474)
T 4abn_A 186 DSGDEHSRHVMDSVRQAKLAVQMDVLD 212 (474)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CChhhhhhhHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999986
No 70
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.21 E-value=9.1e-11 Score=102.39 Aligned_cols=93 Identities=15% Similarity=0.191 Sum_probs=58.1
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 027439 128 WDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASR 207 (223)
Q Consensus 128 ~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ee 207 (223)
+|...+++++|+..|+++++++|+++.++.++|.++. ..+++++|+.+|+++++++|+++.++..++.++.. .|++++
T Consensus 212 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~ 289 (388)
T 1w3b_A 212 VLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY-EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKE-KGSVAE 289 (388)
T ss_dssp HHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHH-HSCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCHHH
Confidence 3444556666666666666666666666666664444 35666666666666666666666666666655555 666666
Q ss_pred HHHHHHHHHHhCCCC
Q 027439 208 AESYFDQAVKAAPDD 222 (223)
Q Consensus 208 Ai~~fekAL~l~Pdn 222 (223)
|+.+|+++++.+|++
T Consensus 290 A~~~~~~al~~~p~~ 304 (388)
T 1w3b_A 290 AEDCYNTALRLCPTH 304 (388)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhhCccc
Confidence 666666666666653
No 71
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.20 E-value=6.9e-11 Score=94.54 Aligned_cols=91 Identities=13% Similarity=0.087 Sum_probs=81.6
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..|...+++++|+.+|++++ +| ++.++.++|.++. ..+++++|+.+|++++.++|+++.++..+|.+++. .|+++
T Consensus 14 ~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~ 88 (213)
T 1hh8_A 14 VLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYT-ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ-TEKYD 88 (213)
T ss_dssp HHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cccHH
Confidence 44566789999999999985 44 7899999996666 58999999999999999999999999999988888 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|++++++.|++
T Consensus 89 ~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 89 LAIKDLKEALIQLRGN 104 (213)
T ss_dssp HHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHhCCCc
Confidence 9999999999988864
No 72
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.20 E-value=8.4e-11 Score=99.24 Aligned_cols=93 Identities=17% Similarity=0.152 Sum_probs=86.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.+|++++.++|++..++..+|.+++. .|++
T Consensus 10 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 87 (359)
T 3ieg_A 10 GKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLK-QGKL 87 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHH-cCCh
Confidence 345667789999999999999999999999999997666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhCC
Q 027439 206 SRAESYFDQAVKAAP 220 (223)
Q Consensus 206 eeAi~~fekAL~l~P 220 (223)
++|+..|+++++.+|
T Consensus 88 ~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 88 DEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999999988
No 73
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.19 E-value=7.2e-11 Score=103.07 Aligned_cols=95 Identities=18% Similarity=0.249 Sum_probs=79.1
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
+.+|...+++++|+.+|+++++++|+++.++.++|.++. ..+++++|+.+|+++++++|+++.++..++.++.. .|++
T Consensus 244 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~ 321 (388)
T 1w3b_A 244 ACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALK-EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE-QGNI 321 (388)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH-cCCH
Confidence 345566788899999999999999999888888886655 57889999998998888888888888888877666 8888
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++.+|++
T Consensus 322 ~~A~~~~~~al~~~p~~ 338 (388)
T 1w3b_A 322 EEAVRLYRKALEVFPEF 338 (388)
T ss_dssp HHHHHHHHHHTTSCTTC
T ss_pred HHHHHHHHHHHhcCCCc
Confidence 88888888888888764
No 74
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.19 E-value=1.7e-10 Score=94.13 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=67.1
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
+.+|...+++++|+.+|+++++.+|.+..++..+|.++. ..+++++|+.+|+++++.+|++..++..++.++.. .|++
T Consensus 148 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 225 (252)
T 2ho1_A 148 GLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLY-KEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKV-FEDR 225 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH-ccCH
Confidence 344555667777777777777777777777777775555 46777777777777777777777777777766555 7777
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++.+|++
T Consensus 226 ~~A~~~~~~~~~~~p~~ 242 (252)
T 2ho1_A 226 DTAASYGLQLKRLYPGS 242 (252)
T ss_dssp HHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHCCCC
Confidence 77777777777777764
No 75
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.19 E-value=1.3e-10 Score=97.32 Aligned_cols=89 Identities=12% Similarity=0.079 Sum_probs=42.6
Q ss_pred CCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 027439 131 NNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAES 210 (223)
Q Consensus 131 ~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~ 210 (223)
..+++++|+.+|+++++.+|+++.++.++|.++. ..+++++|+.+|+++++.+|+++.++..+|.++.. .|++++|+.
T Consensus 184 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~ 261 (327)
T 3cv0_A 184 LSNNYDSAAANLRRAVELRPDDAQLWNKLGATLA-NGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN-MSQYDLAAK 261 (327)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hccHHHHHH
Confidence 3344444555555544444444444444443333 24455555555555555555444444444444444 455555555
Q ss_pred HHHHHHHhCCC
Q 027439 211 YFDQAVKAAPD 221 (223)
Q Consensus 211 ~fekAL~l~Pd 221 (223)
+|+++++.+|+
T Consensus 262 ~~~~a~~~~~~ 272 (327)
T 3cv0_A 262 QLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHhCCc
Confidence 55555444443
No 76
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.19 E-value=6e-12 Score=90.45 Aligned_cols=88 Identities=17% Similarity=0.130 Sum_probs=75.8
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND------GNVLSMYGDLIW 199 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d------~~~l~~lA~ll~ 199 (223)
|..|...+++++|+.+|+++++++|.++.++.++|.++. ..+++++|+.+|+++++++|++ ..++..++.++.
T Consensus 11 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~ 89 (111)
T 2l6j_A 11 GNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALI-KLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQG 89 (111)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 345667889999999999999999999999999997666 5899999999999999999999 888888887776
Q ss_pred HHcCCHHHHHHHHHHH
Q 027439 200 QSHKDASRAESYFDQA 215 (223)
Q Consensus 200 ~~~G~~eeAi~~fekA 215 (223)
. .|++++|+..|+++
T Consensus 90 ~-~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 90 A-VGSVQIPVVEVDEL 104 (111)
T ss_dssp H-HHCCCCCSSSSSSC
T ss_pred H-HHhHhhhHhHHHHh
Confidence 6 77777777666543
No 77
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.19 E-value=7.6e-11 Score=101.33 Aligned_cols=94 Identities=12% Similarity=-0.036 Sum_probs=81.6
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHH-------------------------------
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEE------------------------------- 175 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~------------------------------- 175 (223)
..+...|++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.
T Consensus 125 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~ 203 (287)
T 3qou_A 125 MQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLI-ALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTP 203 (287)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHH-HCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCc
Confidence 33455789999999999999999999999999997666 5788877654
Q ss_pred ---HHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 176 ---YCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 176 ---~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.|++++..+|+++.+++.+|.++.. .|++++|+..|+++++.+|++
T Consensus 204 a~~~l~~al~~~P~~~~~~~~la~~l~~-~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 204 EIQQLQQQVAENPEDAALATQLALQLHQ-VGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTG
T ss_pred cHHHHHHHHhcCCccHHHHHHHHHHHHH-cccHHHHHHHHHHHHhccccc
Confidence 4566688899999999999988887 999999999999999999975
No 78
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.19 E-value=1.2e-10 Score=95.05 Aligned_cols=95 Identities=22% Similarity=0.317 Sum_probs=76.9
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAIL--MSPNDGNVLSMYGDLIWQSHK 203 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~--ldP~d~~~l~~lA~ll~~~~G 203 (223)
+.+|...+++++|+.+|+++++.+|.+..++.++|.++. ..+++++|+++|++++. .+|.+..++..+|.+++. .|
T Consensus 78 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g 155 (252)
T 2ho1_A 78 AVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLY-EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ-MK 155 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH-TT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH-cC
Confidence 345556678888888888888888888888888886555 57888888888888888 778888888888877777 88
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q 027439 204 DASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 204 ~~eeAi~~fekAL~l~Pdn 222 (223)
++++|+.+|+++++.+|++
T Consensus 156 ~~~~A~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 156 KPAQAKEYFEKSLRLNRNQ 174 (252)
T ss_dssp CHHHHHHHHHHHHHHCSCC
T ss_pred CHHHHHHHHHHHHhcCccc
Confidence 8888888888888888764
No 79
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.19 E-value=1.8e-10 Score=96.42 Aligned_cols=94 Identities=13% Similarity=-0.018 Sum_probs=86.6
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..+...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.+++++++.+|++..++..+|.++.. .|+++
T Consensus 29 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~ 106 (327)
T 3cv0_A 29 LSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-EHNAN 106 (327)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH-cCCHH
Confidence 34556789999999999999999999999999997666 58999999999999999999999999999988877 99999
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|+++++.+|++
T Consensus 107 ~A~~~~~~~~~~~~~~ 122 (327)
T 3cv0_A 107 AALASLRAWLLSQPQY 122 (327)
T ss_dssp HHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHhCCcc
Confidence 9999999999998875
No 80
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.19 E-value=8.3e-11 Score=96.56 Aligned_cols=93 Identities=15% Similarity=0.128 Sum_probs=83.9
Q ss_pred cccCCCChHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 027439 128 WDPNNHGNNSTDLYYQKMIQA----DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK 203 (223)
Q Consensus 128 ~Y~~~gd~~eA~~~y~~aLel----dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G 203 (223)
.+...+++++|+.+|+++++. +|.++.++..+|.++. ..+++++|+.+|++++.++|+++.++..+|.+++. .|
T Consensus 14 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~ 91 (275)
T 1xnf_A 14 PLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYD-SLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ-AG 91 (275)
T ss_dssp CCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TT
T ss_pred ccCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH-HcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-cc
Confidence 345568999999999999998 3567889999997666 58999999999999999999999999999988887 99
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q 027439 204 DASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 204 ~~eeAi~~fekAL~l~Pdn 222 (223)
++++|+.+|+++++++|++
T Consensus 92 ~~~~A~~~~~~al~~~~~~ 110 (275)
T 1xnf_A 92 NFDAAYEAFDSVLELDPTY 110 (275)
T ss_dssp CHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHhcCccc
Confidence 9999999999999999975
No 81
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.18 E-value=1.4e-10 Score=91.90 Aligned_cols=86 Identities=19% Similarity=0.254 Sum_probs=33.0
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEAR-GDLLKAEEYCARAIL--MSPNDGNVLSMYGDLIWQSHKDASRAE 209 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~-gdyeeA~~~~ekAL~--ldP~d~~~l~~lA~ll~~~~G~~eeAi 209 (223)
+++++|+.+|+++++.+|.+..++.++|.++. .. +++++|+.+++++++ .+|++..++..+|.++.. .|++++|+
T Consensus 56 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~ 133 (225)
T 2vq2_A 56 KVNDKAQESFRQALSIKPDSAEINNNYGWFLC-GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAK-QGQFGLAE 133 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHH-TTCHHHHH
T ss_pred CChHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHH-cCCHHHHH
Confidence 33444444444444444444444434442222 23 344444444444443 223333333333333333 34444444
Q ss_pred HHHHHHHHhCC
Q 027439 210 SYFDQAVKAAP 220 (223)
Q Consensus 210 ~~fekAL~l~P 220 (223)
.+|+++++.+|
T Consensus 134 ~~~~~~~~~~~ 144 (225)
T 2vq2_A 134 AYLKRSLAAQP 144 (225)
T ss_dssp HHHHHHHHHST
T ss_pred HHHHHHHHhCC
Confidence 44444443333
No 82
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.18 E-value=1.5e-11 Score=87.78 Aligned_cols=86 Identities=13% Similarity=0.104 Sum_probs=74.7
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPL-LLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~-~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
..|...+++++|+.+|+++++.+|+++. ++.++|.++. ..+++++|+.+|+++++++|++..++.. +.+
T Consensus 8 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~---------~~~ 77 (99)
T 2kc7_A 8 KELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYR-KLGDWQKALNNYQSAIELNPDSPALQAR---------KMV 77 (99)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTSTHHHHH---------HHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCcHHHHHH---------HHH
Confidence 3455678999999999999999999999 9999997666 5899999999999999999999987633 447
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
.+|+..|++++..+|++
T Consensus 78 ~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 78 MDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHhccCccc
Confidence 78899999998888765
No 83
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.17 E-value=1.7e-10 Score=91.48 Aligned_cols=93 Identities=15% Similarity=0.153 Sum_probs=73.5
Q ss_pred cccccCC-CChHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Q 027439 126 GSWDPNN-HGNNSTDLYYQKMIQ--ADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSH 202 (223)
Q Consensus 126 g~~Y~~~-gd~~eA~~~y~~aLe--ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~ 202 (223)
+.+|... +++++|+.+|+++++ .+|.+..++.++|.++. ..+++++|+.+|+++++.+|+++.++..++.+++. .
T Consensus 83 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~ 160 (225)
T 2vq2_A 83 GWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSA-KQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKML-A 160 (225)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-H
T ss_pred HHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH-c
Confidence 3455566 788888888888888 66666788888886555 57888888888888888888888888888877777 8
Q ss_pred CCHHHHHHHHHHHHHhCC
Q 027439 203 KDASRAESYFDQAVKAAP 220 (223)
Q Consensus 203 G~~eeAi~~fekAL~l~P 220 (223)
|++++|+.+|+++++.+|
T Consensus 161 ~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 161 GQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp TCHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHhCC
Confidence 888888888888888777
No 84
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.17 E-value=1.3e-10 Score=102.54 Aligned_cols=95 Identities=17% Similarity=0.158 Sum_probs=87.2
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.+|+++++.+|++..++..+|.++.. .|++
T Consensus 33 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~ 110 (450)
T 2y4t_A 33 GKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLK-QGKL 110 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-cCCH
Confidence 344566789999999999999999999999999997666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++.+|++
T Consensus 111 ~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 111 DEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HHHHHHHHHHHTSCCCH
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 99999999999998864
No 85
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.17 E-value=1.8e-10 Score=107.11 Aligned_cols=95 Identities=14% Similarity=0.110 Sum_probs=88.3
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc---
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSH--- 202 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~--- 202 (223)
|.+|...+++++|+++|+++++++|+++.++.++|.++. .++++++|+++|+++++++|+++.++..++.++.. .
T Consensus 64 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~ 141 (568)
T 2vsy_A 64 GRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE-DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR-LCDW 141 (568)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCC
T ss_pred HHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hhcc
Confidence 456677889999999999999999999999999997666 58999999999999999999999999999988887 8
Q ss_pred CCHHHHHHHHHHHHHhCCCC
Q 027439 203 KDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 203 G~~eeAi~~fekAL~l~Pdn 222 (223)
|++++|+.+|+++++.+|++
T Consensus 142 g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 142 RALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp TTHHHHHHHHHHHHHHTCCC
T ss_pred ccHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999975
No 86
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.16 E-value=2.4e-10 Score=96.46 Aligned_cols=95 Identities=14% Similarity=0.071 Sum_probs=88.1
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
+..|...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.++++++..+|+++.++..+|.+++. .|++
T Consensus 127 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~ 204 (359)
T 3ieg_A 127 ALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFI-KEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQ-LGDH 204 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHH-HTCH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCH
Confidence 346667889999999999999999999999999997666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++.+|++
T Consensus 205 ~~A~~~~~~a~~~~~~~ 221 (359)
T 3ieg_A 205 ELSLSEVRECLKLDQDH 221 (359)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhhCccc
Confidence 99999999999999975
No 87
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.16 E-value=1.3e-10 Score=84.53 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=63.3
Q ss_pred hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 027439 148 ADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAP 220 (223)
Q Consensus 148 ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~P 220 (223)
.+|+++.++.++|.+++ ..+++++|+.+|+++++++|+++.++..+|.++.. .|++++|+.+|++++++.|
T Consensus 2 ~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHL-KHDNASRALALFEELVETDPDYVGTYYHLGKLYER-LDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp ---CCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhhh
Confidence 57999999999997666 58999999999999999999999999999988877 9999999999999998865
No 88
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.16 E-value=9.9e-11 Score=96.40 Aligned_cols=93 Identities=13% Similarity=0.109 Sum_probs=64.5
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHc
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGN----VLSMYGDLIWQSH 202 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~----~l~~lA~ll~~~~ 202 (223)
..|...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.+|++++. .|+++. ++..+|.++.. .
T Consensus 11 ~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~-~ 87 (272)
T 3u4t_A 11 DFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYY-ELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMK-K 87 (272)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHH-HTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHH-T
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHH-c
Confidence 34555677777777777777777777777777775444 46777777777777777 444333 36677766666 7
Q ss_pred CCHHHHHHHHHHHHHhCCCC
Q 027439 203 KDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 203 G~~eeAi~~fekAL~l~Pdn 222 (223)
|++++|+.+|+++++.+|++
T Consensus 88 ~~~~~A~~~~~~a~~~~~~~ 107 (272)
T 3u4t_A 88 GQDSLAIQQYQAAVDRDTTR 107 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTC
T ss_pred ccHHHHHHHHHHHHhcCccc
Confidence 77777777777777777764
No 89
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.15 E-value=2.6e-10 Score=101.65 Aligned_cols=94 Identities=18% Similarity=0.149 Sum_probs=85.9
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+.+|+++++.+| ++.++.++|.++. ..+++++|+.+|+++++++|++..++..+|.++.. .|++
T Consensus 13 g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~ 89 (514)
T 2gw1_A 13 GNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYV-SVGDLKKVVEMSTKALELKPDYSKVLLRRASANEG-LGKF 89 (514)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHH-HHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHH-HhhH
Confidence 3456678899999999999999999 6999999997666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+..|++++..+|.+
T Consensus 90 ~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 90 ADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHhcCCCc
Confidence 99999999999998754
No 90
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.15 E-value=3.2e-11 Score=116.25 Aligned_cols=94 Identities=6% Similarity=-0.122 Sum_probs=84.5
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+..|+++++++|+++.++.++|.++. .++++++|++.|++|++++|+++.++..+|.++.. .|++
T Consensus 440 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~-~g~~ 517 (681)
T 2pzi_A 440 VRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL-AGNT 517 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH-HTCC
T ss_pred HHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCCh
Confidence 445566799999999999999999999999999997666 58999999999999999999999999999988777 8999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++ +.+|++|++++|++
T Consensus 518 ~~-~~~~~~al~~~P~~ 533 (681)
T 2pzi_A 518 DE-HKFYQTVWSTNDGV 533 (681)
T ss_dssp CT-TCHHHHHHHHCTTC
T ss_pred HH-HHHHHHHHHhCCch
Confidence 99 99999999999975
No 91
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.14 E-value=1.9e-10 Score=96.42 Aligned_cols=86 Identities=16% Similarity=0.115 Sum_probs=50.3
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFD 213 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fe 213 (223)
++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.+|++++..+|++..++..+|.++.. .|++++|+.+|+
T Consensus 106 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~ 183 (330)
T 3hym_B 106 KNEHARRYLSKATTLEKTYGPAWIAYGHSFA-VESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL-TNNSKLAERFFS 183 (330)
T ss_dssp CHHHHHHHHHHHHTTCTTCTHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 5566666666666666666666666664444 35666666666666666666555555555555544 566666666666
Q ss_pred HHHHhCCC
Q 027439 214 QAVKAAPD 221 (223)
Q Consensus 214 kAL~l~Pd 221 (223)
++++.+|+
T Consensus 184 ~al~~~~~ 191 (330)
T 3hym_B 184 QALSIAPE 191 (330)
T ss_dssp HHHTTCTT
T ss_pred HHHHhCCC
Confidence 66655554
No 92
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.14 E-value=2.3e-10 Score=95.32 Aligned_cols=95 Identities=14% Similarity=0.042 Sum_probs=82.8
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRN---PLLLSNYARFLKEARGDLLKAEEYCARAILMSPND---GNVLSMYGDLIWQ 200 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n---~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d---~~~l~~lA~ll~~ 200 (223)
..+...+++++|+.+|+++++.+|++ +.++..+|.+++ .++++++|+..|++++..+|++ +.+++.+|.+++.
T Consensus 23 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~ 101 (261)
T 3qky_A 23 MEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYY-QNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYK 101 (261)
T ss_dssp HHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHH
Confidence 44556789999999999999999999 899999997776 5899999999999999998855 6778888965443
Q ss_pred H-------cCCHHHHHHHHHHHHHhCCCC
Q 027439 201 S-------HKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 201 ~-------~G~~eeAi~~fekAL~l~Pdn 222 (223)
. .|++++|+.+|+++++.+|++
T Consensus 102 ~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 102 LSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp HCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred hcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 1 799999999999999999975
No 93
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.14 E-value=2.4e-10 Score=95.79 Aligned_cols=91 Identities=16% Similarity=0.126 Sum_probs=51.8
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
.+|...+++++|+.+|+++++.+|.+..++..+|.++. ..+++++|+.+|+++++.+|+++.++..+|.++.. .|+++
T Consensus 133 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~ 210 (330)
T 3hym_B 133 HSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYG-LTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ-NGEWK 210 (330)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH-TTCHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cccHH
Confidence 44444555666666666666666655555555554333 35566666666666666666655555555555554 55566
Q ss_pred HHHHHHHHHHHhC
Q 027439 207 RAESYFDQAVKAA 219 (223)
Q Consensus 207 eAi~~fekAL~l~ 219 (223)
+|+.+|+++++..
T Consensus 211 ~A~~~~~~a~~~~ 223 (330)
T 3hym_B 211 TAEKWFLDALEKI 223 (330)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 6666666555543
No 94
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.13 E-value=1.5e-10 Score=96.47 Aligned_cols=95 Identities=20% Similarity=0.043 Sum_probs=83.5
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHH--------hCCHHHHHHHHHHHHHhCCCCHHHH---
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRN---PLLLSNYARFLKEA--------RGDLLKAEEYCARAILMSPNDGNVL--- 191 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n---~~~l~nlA~~l~~~--------~gdyeeA~~~~ekAL~ldP~d~~~l--- 191 (223)
|.+|...+++++|+..|+++++.+|++ +.++..+|.+++ . .+++++|+..|++++..+|+++.+.
T Consensus 59 g~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 137 (261)
T 3qky_A 59 ARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY-KLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDAT 137 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH-HHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHH-HhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHH
Confidence 456677899999999999999998855 678899996655 6 7999999999999999999987766
Q ss_pred --------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 192 --------------SMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 192 --------------~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+.+|.+++. .|++++|+..|+++++..|++
T Consensus 138 ~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 138 QKIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHCCCC
Confidence 778988887 999999999999999999974
No 95
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.11 E-value=3.8e-10 Score=108.77 Aligned_cols=92 Identities=13% Similarity=-0.084 Sum_probs=84.8
Q ss_pred cCCCChHHHHHHHHHHH--------HhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 027439 130 PNNHGNNSTDLYYQKMI--------QADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQS 201 (223)
Q Consensus 130 ~~~gd~~eA~~~y~~aL--------eldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~ 201 (223)
...+++++|+++|++++ +.+|++..++.++|.++. .++++++|+..|+++++++|+++.+++.+|.+++.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~- 479 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALL-DLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL- 479 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHH-hcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-
Confidence 34679999999999999 999999999999997776 58999999999999999999999999999988887
Q ss_pred cCCHHHHHHHHHHHHHhCCCCC
Q 027439 202 HKDASRAESYFDQAVKAAPDDW 223 (223)
Q Consensus 202 ~G~~eeAi~~fekAL~l~Pdn~ 223 (223)
.|++++|+..|++|++++|++.
T Consensus 480 ~g~~~~A~~~~~~al~l~P~~~ 501 (681)
T 2pzi_A 480 TGDYDSATKHFTEVLDTFPGEL 501 (681)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCS
T ss_pred cCCHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999863
No 96
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.11 E-value=4.1e-10 Score=85.69 Aligned_cols=91 Identities=14% Similarity=-0.018 Sum_probs=79.6
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHHcC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDL--IWQSHK 203 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~l--l~~~~G 203 (223)
|.+|...+++++|+.+|+++++.+|.++.++.++|.++. ..+++++|+.+|+++++++|++..++..++.+ +.. .+
T Consensus 54 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~-~~ 131 (166)
T 1a17_A 54 SLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM-ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-QK 131 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-HH
Confidence 455667789999999999999999999999999996666 58999999999999999999999988655544 555 89
Q ss_pred CHHHHHHHHHHHHHh
Q 027439 204 DASRAESYFDQAVKA 218 (223)
Q Consensus 204 ~~eeAi~~fekAL~l 218 (223)
++++|+..++++..+
T Consensus 132 ~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 132 AFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccchHHH
Confidence 999999999998755
No 97
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.11 E-value=3e-10 Score=100.18 Aligned_cols=95 Identities=12% Similarity=0.150 Sum_probs=86.2
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPL----LLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQS 201 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~----~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~ 201 (223)
+..|...+++++|+.+|+++++++|.++. ++.++|.++. ..+++++|+.+|++++.++|+++.++..+|.++..
T Consensus 264 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~- 341 (450)
T 2y4t_A 264 AEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFS-KDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLI- 341 (450)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-
Confidence 45666778999999999999999999954 7888896666 58999999999999999999999999999988888
Q ss_pred cCCHHHHHHHHHHHHHhCCCC
Q 027439 202 HKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 202 ~G~~eeAi~~fekAL~l~Pdn 222 (223)
.|++++|+.+|+++++++|++
T Consensus 342 ~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 342 EEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp TTCHHHHHHHHHHHHTTSSSC
T ss_pred hcCHHHHHHHHHHHHHhCcch
Confidence 999999999999999999985
No 98
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.11 E-value=6.5e-10 Score=100.04 Aligned_cols=95 Identities=14% Similarity=0.196 Sum_probs=82.3
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|.+|...+++++|+.+|+++++.+|+++.++..+|.++. ..+++++|+.+|++++..+|+++.++..+|.+++. .|++
T Consensus 283 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~ 360 (537)
T 3fp2_A 283 ALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYF-ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK-QGKF 360 (537)
T ss_dssp HHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCH
Confidence 455667788999999999999999999999999996666 58999999999999999999999999999988777 8999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+.+|+++++.+|++
T Consensus 361 ~~A~~~~~~~~~~~~~~ 377 (537)
T 3fp2_A 361 TESEAFFNETKLKFPTL 377 (537)
T ss_dssp HHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 99999999999988875
No 99
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.11 E-value=1e-10 Score=92.61 Aligned_cols=48 Identities=8% Similarity=-0.031 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 173 AEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 173 A~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
|+..++++++++|+++.+++.+|.++.. .|++++|+..|+++++.+|+
T Consensus 93 a~~~~~~al~~~P~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~p~ 140 (176)
T 2r5s_A 93 ELKRLEQELAANPDNFELACELAVQYNQ-VGRDEEALELLWNILKVNLG 140 (176)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHH-cccHHHHHHHHHHHHHhCcc
Confidence 3445556666677777777777776666 78888888888888877775
No 100
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.10 E-value=1.7e-10 Score=103.80 Aligned_cols=94 Identities=22% Similarity=0.253 Sum_probs=80.7
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|..|...+++++|+.+|+++++.+|+++.++.++|.++. .++++++|+..|+++++++|+++.++..+|.++.. .|++
T Consensus 32 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~ 109 (537)
T 3fp2_A 32 GNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYI-STGDLEKVIEFTTKALEIKPDHSKALLRRASANES-LGNF 109 (537)
T ss_dssp HHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH-cCCH
Confidence 345667789999999999999999999999999997666 58999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+..|+ ++..+|+.
T Consensus 110 ~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 110 TDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHHHHH-HHC-----
T ss_pred HHHHHHHH-HHhcCCCC
Confidence 99999995 77776653
No 101
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.10 E-value=6.1e-10 Score=96.26 Aligned_cols=97 Identities=11% Similarity=-0.098 Sum_probs=82.1
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLK-EARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK 203 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~-~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G 203 (223)
-+.+|...|++++|++.|+++++.+|++..+....+.+.. ...+++++|+.+|++++..+|+++.++..+|.++.. .|
T Consensus 136 l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~-~g 214 (291)
T 3mkr_A 136 TVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMA-QG 214 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cC
Confidence 3456777899999999999999999998755443332221 124799999999999999999999999999987777 99
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q 027439 204 DASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 204 ~~eeAi~~fekAL~l~Pdn 222 (223)
++++|+..|+++++++|+|
T Consensus 215 ~~~eA~~~l~~al~~~p~~ 233 (291)
T 3mkr_A 215 RWEAAEGVLQEALDKDSGH 233 (291)
T ss_dssp CHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999986
No 102
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.09 E-value=5.6e-10 Score=102.20 Aligned_cols=96 Identities=15% Similarity=0.140 Sum_probs=87.0
Q ss_pred ccccccCCCChHHHHHHHHHHHHh------CCCC-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQA------DPRN-PLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDL 197 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLel------dP~n-~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~l 197 (223)
-+.+|...|++++|+++|+++++. +|++ ..++..++.++. +.|++++|+++|+++++++|+++.++..++.+
T Consensus 481 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~ 559 (597)
T 2xpi_A 481 LGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYR-KLKMYDAAIDALNQGLLLSTNDANVHTAIALV 559 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 345666778999999999999998 6765 789999997766 58999999999999999999999999999988
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 198 IWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 198 l~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+.. .|++++|+.+|+++++++|++
T Consensus 560 ~~~-~g~~~~A~~~~~~~l~~~p~~ 583 (597)
T 2xpi_A 560 YLH-KKIPGLAITHLHESLAISPNE 583 (597)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHH-hCCHHHHHHHHHHHHhcCCCC
Confidence 888 999999999999999999986
No 103
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.08 E-value=6e-10 Score=77.18 Aligned_cols=71 Identities=24% Similarity=0.294 Sum_probs=44.6
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 027439 128 WDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIW 199 (223)
Q Consensus 128 ~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~ 199 (223)
.|...+++++|+.+|+++++.+|.++.++.++|.++. ..+++++|+.+|+++++++|+++.++..++.++.
T Consensus 18 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 18 AYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 3444566666666666666666666666666664444 3566666666666666666666666666665544
No 104
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.08 E-value=4.5e-10 Score=85.27 Aligned_cols=69 Identities=13% Similarity=0.199 Sum_probs=62.8
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 152 NPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 152 n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.+.++.++|..++ .+++|++|+.+|++|++++|+++.++..+|.+++. .|++++|+..|+++++++|++
T Consensus 7 ~A~a~~~lG~~~~-~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 7 AAIAEKDLGNAAY-KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hhhHHHHHHHHHHHHHhCccc
Confidence 3567889998777 58999999999999999999999999999988888 999999999999999998754
No 105
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.07 E-value=4.9e-10 Score=98.78 Aligned_cols=91 Identities=11% Similarity=0.031 Sum_probs=81.1
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|.+|...+++++|+.+|+++++++|+++.++.++|.++. .++++++|+.+|++|++++|++..++..++.++.. .+++
T Consensus 203 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~-~~~~ 280 (336)
T 1p5q_A 203 AMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHL-AVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR-IRRQ 280 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-HHHH
Confidence 456677899999999999999999999999999997776 58999999999999999999999999999988777 8999
Q ss_pred HHH-HHHHHHHHHh
Q 027439 206 SRA-ESYFDQAVKA 218 (223)
Q Consensus 206 eeA-i~~fekAL~l 218 (223)
++| ...|++++..
T Consensus 281 ~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 281 LAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 988 5677777654
No 106
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.07 E-value=3.1e-10 Score=93.31 Aligned_cols=95 Identities=19% Similarity=0.139 Sum_probs=81.8
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNP---LLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGN---VLSMYGDLIWQ 200 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~---~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~---~l~~lA~ll~~ 200 (223)
..+...+++++|+.+|+++++.+|.++ .++.++|.+++ .++++++|+..|+++++.+|+++. +++.+|.+++.
T Consensus 12 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~ 90 (225)
T 2yhc_A 12 QQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYY-KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMA 90 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHh
Confidence 345566899999999999999999874 78999997776 589999999999999999999875 78888877654
Q ss_pred H-----------------cCCHHHHHHHHHHHHHhCCCC
Q 027439 201 S-----------------HKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 201 ~-----------------~G~~eeAi~~fekAL~l~Pdn 222 (223)
. .|++++|+..|+++++..|++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~ 129 (225)
T 2yhc_A 91 LDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNS 129 (225)
T ss_dssp HHC--------------CCHHHHHHHHHHHHHHTTCTTC
T ss_pred hhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCC
Confidence 1 578999999999999999986
No 107
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.05 E-value=3.2e-10 Score=97.16 Aligned_cols=95 Identities=13% Similarity=0.019 Sum_probs=78.1
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHhCCCC------HHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEAR-GDLLKAEEYCARAILMSPND------GNVLS 192 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~-gdyeeA~~~~ekAL~ldP~d------~~~l~ 192 (223)
|.+|...|++++|+.+|++++++.|.. +.++.++|.++. .+ +++++|+.+|++|+++.|++ ..++.
T Consensus 84 g~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~ 162 (292)
T 1qqe_A 84 YKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE-NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFI 162 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Confidence 456677789999999999999987754 467889995555 55 99999999999999998765 46788
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 193 MYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 193 ~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.+|.++.. +|++++|+.+|++++++.|++
T Consensus 163 ~lg~~~~~-~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 163 KCADLKAL-DGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHH-hCCHHHHHHHHHHHHHHHhcC
Confidence 88988777 999999999999999988764
No 108
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.05 E-value=9.2e-10 Score=94.66 Aligned_cols=85 Identities=19% Similarity=0.229 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHH
Q 027439 136 NSTDLYYQKMIQ-ADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGN-VLSMYGDLIWQSHKDASRAESYFD 213 (223)
Q Consensus 136 ~eA~~~y~~aLe-ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~-~l~~lA~ll~~~~G~~eeAi~~fe 213 (223)
++|+.+|+++++ ++|++..+|.++|.++. ..+++++|+..|+++++++|+++. +|..++.++.. .|++++|+..|+
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 158 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIFK 158 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH-HHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHH-hcCHHHHHHHHH
Confidence 788888888888 68888888888886555 578888888888888888888876 78888877666 788888888888
Q ss_pred HHHHhCCCC
Q 027439 214 QAVKAAPDD 222 (223)
Q Consensus 214 kAL~l~Pdn 222 (223)
+|++.+|.+
T Consensus 159 ~a~~~~p~~ 167 (308)
T 2ond_A 159 KAREDARTR 167 (308)
T ss_dssp HHHTSTTCC
T ss_pred HHHhcCCCC
Confidence 888877754
No 109
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.05 E-value=4.4e-10 Score=92.40 Aligned_cols=96 Identities=9% Similarity=-0.021 Sum_probs=81.5
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHHH-----------------hCCHHHHHHHHHHHHHhCC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPL---LLSNYARFLKEA-----------------RGDLLKAEEYCARAILMSP 185 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~---~l~nlA~~l~~~-----------------~gdyeeA~~~~ekAL~ldP 185 (223)
|.+|...+++++|+..|+++++.+|++.. ++..+|.+++.. .+++++|+..|+++++.+|
T Consensus 48 g~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P 127 (225)
T 2yhc_A 48 IYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYP 127 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCc
Confidence 45677789999999999999999999864 788888666531 4689999999999999999
Q ss_pred CCHHHH-----------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 186 NDGNVL-----------------SMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 186 ~d~~~l-----------------~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+++.+. ..+|.+++. .|++++|+..|+++++..|++
T Consensus 128 ~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 128 NSQYTTDATKRLVFLKDRLAKYEYSVAEYYTE-RGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTS
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHCcCC
Confidence 998654 456766777 999999999999999999875
No 110
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.04 E-value=5.2e-10 Score=96.20 Aligned_cols=95 Identities=14% Similarity=0.188 Sum_probs=65.9
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPL-LLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~-~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
.++...+++++|+++|+++++++|.++. +|.+++.++. +.+++++|+..|++|++.+|.+..++..++.+.+...|++
T Consensus 107 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~ 185 (308)
T 2ond_A 107 DYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDK 185 (308)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH-HHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCH
T ss_pred HHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCH
Confidence 3445567888999999999998888876 8888886655 4677777777777777776666666655554433335666
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
++|+..|+++++.+|++
T Consensus 186 ~~A~~~~~~al~~~p~~ 202 (308)
T 2ond_A 186 SVAFKIFELGLKKYGDI 202 (308)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 77777777776666653
No 111
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.04 E-value=1.1e-10 Score=103.26 Aligned_cols=96 Identities=11% Similarity=0.083 Sum_probs=51.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|.+|...++|++|+.+|+++++++|+++.+++++|.++. .++++++|+.+|+++++++|++..++..++.+.....+..
T Consensus 237 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~-~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~ 315 (338)
T 2if4_A 237 AACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKA-ELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALY 315 (338)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHTTC-----------------------
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 455677899999999999999999999999999997766 5899999999999999999999999999998766657888
Q ss_pred HHHHHHHHHHHHhCCCC
Q 027439 206 SRAESYFDQAVKAAPDD 222 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn 222 (223)
+++...|++++...|++
T Consensus 316 ~~a~~~~~~~l~~~p~~ 332 (338)
T 2if4_A 316 QKQKEMYKGIFKGKDEG 332 (338)
T ss_dssp -----------------
T ss_pred HHHHHHHHHhhCCCCCC
Confidence 99999999999998875
No 112
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.03 E-value=9.4e-11 Score=92.78 Aligned_cols=94 Identities=17% Similarity=0.043 Sum_probs=79.6
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..+...+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|++++..+| ++.++..++.+.+....+..
T Consensus 14 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~ 91 (176)
T 2r5s_A 14 SELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLL-ETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAES 91 (176)
T ss_dssp HHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHH-HTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccc
Confidence 34556789999999999999999999999999997666 68999999999999999999 88887776655443233445
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+..|+++++.+|++
T Consensus 92 ~a~~~~~~al~~~P~~ 107 (176)
T 2r5s_A 92 PELKRLEQELAANPDN 107 (176)
T ss_dssp HHHHHHHHHHHHSTTC
T ss_pred hHHHHHHHHHHhCCCC
Confidence 6899999999999986
No 113
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.03 E-value=2.1e-09 Score=74.36 Aligned_cols=70 Identities=21% Similarity=0.386 Sum_probs=64.1
Q ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 151 RNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 151 ~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.++.++.++|..+. ..+++++|+.+|++++.++|+++.++..+|.+++. .+++++|+.+|+++++++|++
T Consensus 7 ~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 7 NSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred ccHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCC
Confidence 45778899996666 58999999999999999999999999999988888 999999999999999999975
No 114
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.02 E-value=2.8e-10 Score=97.56 Aligned_cols=96 Identities=15% Similarity=0.088 Sum_probs=79.2
Q ss_pred ccccccCC-CChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH-------H
Q 027439 125 WGSWDPNN-HGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGN-------V 190 (223)
Q Consensus 125 gg~~Y~~~-gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~-------~ 190 (223)
-|.+|... +++++|+.+|++++++.|.+ ..++.++|.++. .+++|++|+.+|+++++++|++.. +
T Consensus 123 lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 201 (292)
T 1qqe_A 123 LGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKA-LDGQYIEASDIYSKLIKSSMGNRLSQWSLKDY 201 (292)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHH
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHhcCCcccHHHHHH
Confidence 35667775 99999999999999998865 567899997666 589999999999999999998754 5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 191 LSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 191 l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+..++.++.. .|++++|+.+|+++++++|+.
T Consensus 202 ~~~lg~~~~~-~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 202 FLKKGLCQLA-ATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHGGGCC----
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCC
Confidence 6778876666 999999999999999988863
No 115
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.02 E-value=1.8e-09 Score=80.13 Aligned_cols=71 Identities=13% Similarity=0.032 Sum_probs=64.8
Q ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 150 PRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 150 P~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
|.++..+.++|..++ ..++|++|+.+|+++++++|+++.++..+|.+++. .|++++|+..|+++++++|++
T Consensus 1 p~~a~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~ 71 (126)
T 3upv_A 1 SMKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNF 71 (126)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred CchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCc
Confidence 445678899997777 58999999999999999999999999999988888 999999999999999999986
No 116
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.01 E-value=1.7e-09 Score=99.03 Aligned_cols=94 Identities=14% Similarity=0.057 Sum_probs=59.8
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e 206 (223)
..|...+++++|+.+|+++++++|.+..+|..++..+. ..|++++|+++|+++++.+|++..++..++.++.. .|+++
T Consensus 381 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~ 458 (597)
T 2xpi_A 381 IYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFA-IEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ-LGNIL 458 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cCCHH
Confidence 44455566666666666666666666666666664444 35666666666666666666666666666655555 66666
Q ss_pred HHHHHHHHHHHhCCCC
Q 027439 207 RAESYFDQAVKAAPDD 222 (223)
Q Consensus 207 eAi~~fekAL~l~Pdn 222 (223)
+|+.+|+++++.+|++
T Consensus 459 ~A~~~~~~~~~~~~~~ 474 (597)
T 2xpi_A 459 LANEYLQSSYALFQYD 474 (597)
T ss_dssp HHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 6666666666666553
No 117
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.01 E-value=1.6e-09 Score=77.45 Aligned_cols=69 Identities=12% Similarity=0.002 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 152 NPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 152 n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
++.++.++|..++ ..+++++|+.+|+++++++|+++.++..+|.+++. .|++++|+..|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLF-KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCc
Confidence 4677889997666 58999999999999999999999999999988888 999999999999999999986
No 118
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.00 E-value=1.9e-09 Score=79.30 Aligned_cols=72 Identities=11% Similarity=0.029 Sum_probs=66.1
Q ss_pred CCCCHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 149 DPRNPLLLSNYARFLKEARGD---LLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 149 dP~n~~~l~nlA~~l~~~~gd---yeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+|+|+.++..+|.+++. .++ .++|..++++|+.++|+++.++..+|.+++. .|+|++|+.+|+++++.+|++
T Consensus 2 ~p~~~~~~~~~a~al~~-~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYY-LHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHH-TTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCC
Confidence 69999999999999875 444 7999999999999999999999999999888 999999999999999998863
No 119
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.98 E-value=3e-09 Score=94.73 Aligned_cols=96 Identities=16% Similarity=0.155 Sum_probs=77.8
Q ss_pred cccccCCCChHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--------CCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQA---------DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMS--------PNDG 188 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLel---------dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld--------P~d~ 188 (223)
|.+|...|++++|+++|++++++ +|....++.++|.+++ .+|++++|+.+|++++++. ++.+
T Consensus 58 g~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~-~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~ 136 (472)
T 4g1t_A 58 AYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYY-HMGRLSDVQIYVDKVKHVCEKFSSPYRIESP 136 (472)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCSSCCCCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHhHhcccccchhhH
Confidence 45666788999999999999986 6788889999996666 5899999999999998863 4567
Q ss_pred HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCC
Q 027439 189 NVLSMYGDLIWQS-HKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 189 ~~l~~lA~ll~~~-~G~~eeAi~~fekAL~l~Pdn 222 (223)
.++...|.++... .+++++|+.+|++|++++|++
T Consensus 137 ~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~ 171 (472)
T 4g1t_A 137 ELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKN 171 (472)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCC
Confidence 7888888665542 357899999999999999876
No 120
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.97 E-value=8.6e-10 Score=98.24 Aligned_cols=94 Identities=14% Similarity=0.143 Sum_probs=65.0
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHH---hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPL------LLSNYARFLKEA---RGDLLKAEEYCARAILMSPNDGNVLSMYGDL 197 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~------~l~nlA~~l~~~---~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~l 197 (223)
.+|...+++++|+.+|+++++.+|.+.. ++.++|.++. . .+++++|+.+|++++..+|+++.++..+|.+
T Consensus 380 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 458 (514)
T 2gw1_A 380 EILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLT-RNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQM 458 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHH-TSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHh-hhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 3445556677777777777776666643 6667774444 4 5777777777777777777777777777766
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 198 IWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 198 l~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+.. .|++++|+.+|+++++++|++
T Consensus 459 ~~~-~g~~~~A~~~~~~a~~~~~~~ 482 (514)
T 2gw1_A 459 KLQ-QEDIDEAITLFEESADLARTM 482 (514)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHCSSH
T ss_pred HHH-hcCHHHHHHHHHHHHHhcccc
Confidence 666 777777777777777777753
No 121
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.97 E-value=7e-09 Score=77.04 Aligned_cols=74 Identities=12% Similarity=0.020 Sum_probs=66.8
Q ss_pred HhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 147 QADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 147 eldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
..+|.++..+..+|..++ ..++|++|+.+|++++.++|+++.++..+|.+++. .+++++|+.+|+++++++|++
T Consensus 3 ~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp ---CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred CCccccHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCchh
Confidence 467889999999997777 58999999999999999999999999999988887 999999999999999999986
No 122
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.96 E-value=2.1e-09 Score=76.05 Aligned_cols=72 Identities=14% Similarity=0.216 Sum_probs=66.5
Q ss_pred hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 148 ADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 148 ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
++|+++.++..+|.++. ..+++++|+.+|+++++++|++..++..+|.+++. .+++++|+.+|+++++.+|+
T Consensus 1 l~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQY-DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-LERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCSSTTGGGGHHHHHH-SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSCC
T ss_pred CCCCcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCcc
Confidence 47889999999996666 58999999999999999999999999999988887 99999999999999999987
No 123
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.94 E-value=1.3e-09 Score=90.57 Aligned_cols=94 Identities=20% Similarity=0.270 Sum_probs=82.5
Q ss_pred cccccCCCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------------
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQA--------DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILM-------------- 183 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLel--------dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l-------------- 183 (223)
|.+|...+++++|+.+|++++++ +|....++.++|.++. ..+++++|+.+|++++..
T Consensus 160 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 238 (311)
T 3nf1_A 160 ALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYL-KQGKFKQAETLYKEILTRAHEREFGSVDDENK 238 (311)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHC------C
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCCcchH
Confidence 45677789999999999999998 7777889999997666 589999999999999984
Q ss_pred -----------------------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 184 -----------------------------------SPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 184 -----------------------------------dP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
+|.+..++..+|.++.. .|++++|+.+|++++++.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 239 PIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp CHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHhhc
Confidence 46778889999988887 99999999999999999875
No 124
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.94 E-value=4.5e-09 Score=81.71 Aligned_cols=72 Identities=17% Similarity=0.093 Sum_probs=66.0
Q ss_pred CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 149 DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 149 dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
++.++..+..+|..++ ..++|++|+.+|+++++++|+++.++..+|.+++. .|++++|+.+|+++++++|++
T Consensus 7 ~~~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~ 78 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAM-ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SGQHEKAAEDAELATVVDPKY 78 (164)
T ss_dssp CCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred hhhhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCC
Confidence 4566788999997776 58999999999999999999999999999988888 999999999999999999986
No 125
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.94 E-value=1.4e-09 Score=88.71 Aligned_cols=92 Identities=14% Similarity=0.203 Sum_probs=81.9
Q ss_pred ccccccCCCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCCCH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQA--------DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILM--------SPNDG 188 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLel--------dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l--------dP~d~ 188 (223)
-|.+|...+++++|+.+|++++++ +|....++.++|.++. ..+++++|+.+|++++.+ +|...
T Consensus 91 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 169 (283)
T 3edt_B 91 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ-NQGKAEEVEYYYRRALEIYATRLGPDDPNVA 169 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCHHHH
Confidence 345667788999999999999998 5777889999997666 589999999999999999 77778
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 189 NVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 189 ~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
.++..+|.+++. .|++++|+.+|++++++
T Consensus 170 ~~~~~la~~~~~-~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 170 KTKNNLASCYLK-QGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 899999988888 99999999999999987
No 126
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.92 E-value=2.1e-09 Score=86.11 Aligned_cols=90 Identities=18% Similarity=0.112 Sum_probs=72.2
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|.+|...+++++|+.+|+++++++|+++.++.++|.++. .++++++|+.+|+++++++|++..++..++.++.. .++.
T Consensus 95 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~ 172 (198)
T 2fbn_A 95 ATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANM-YFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK-LKEA 172 (198)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-HHHH
Confidence 456677889999999999999999999999999997776 58999999999999999999999999999987766 7777
Q ss_pred HHHH-HHHHHHHH
Q 027439 206 SRAE-SYFDQAVK 217 (223)
Q Consensus 206 eeAi-~~fekAL~ 217 (223)
+++. ..|.+.+.
T Consensus 173 ~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 173 RKKDKLTFGGMFD 185 (198)
T ss_dssp HC-----------
T ss_pred HHHHHHHHHHHhc
Confidence 7776 45555443
No 127
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.91 E-value=4e-10 Score=104.44 Aligned_cols=94 Identities=14% Similarity=0.007 Sum_probs=78.9
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHHcC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDL--IWQSHK 203 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~l--l~~~~G 203 (223)
|.+|...+++++|+++|+++++++|+++.++.++|.++. .++++++|+++|++|++++|++..++..++.+ +.. .+
T Consensus 47 g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~-~g 124 (477)
T 1wao_1 47 SLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM-ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-QK 124 (477)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHH-HH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-HH
Confidence 456677899999999999999999999999999997666 58999999999999999999999999999977 555 89
Q ss_pred CHHHHHHHHH-----------HHHHhCCC
Q 027439 204 DASRAESYFD-----------QAVKAAPD 221 (223)
Q Consensus 204 ~~eeAi~~fe-----------kAL~l~Pd 221 (223)
++++|+..++ ++++++|+
T Consensus 125 ~~~~A~~~~~~~~~~~~~~~~~al~~~~~ 153 (477)
T 1wao_1 125 AFERAIAGDEHKRSVVDSLDIESMTIEDE 153 (477)
T ss_dssp HHCCC------CCSTTTCCTTSSCCCCTT
T ss_pred HHHHHhccccccchhHhhhhhhhcccccc
Confidence 9999999999 77666654
No 128
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.90 E-value=4.7e-09 Score=75.85 Aligned_cols=78 Identities=13% Similarity=0.086 Sum_probs=69.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
+.+|...+++++|+.+|+++++.+|.++.++..+|.++. ..+++++|+.+|++++.++|+++.++..++.++.. .|++
T Consensus 53 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~-~~~~ 130 (131)
T 2vyi_A 53 AAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS-SLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK-LREA 130 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-HTTC
T ss_pred HHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH-HhcC
Confidence 455667789999999999999999999999999997666 58999999999999999999999999999987766 6654
No 129
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.90 E-value=5.9e-09 Score=76.11 Aligned_cols=76 Identities=14% Similarity=0.017 Sum_probs=68.0
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK 203 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G 203 (223)
|.+|...+++++|+.+|+++++.+|.++.++.++|.++. ..+++++|+.+|++++.++|++..++..++.++.. .+
T Consensus 57 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~-~~ 132 (133)
T 2lni_A 57 AACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE-AMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA-QY 132 (133)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH-HT
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-hc
Confidence 455667789999999999999999999999999996666 68999999999999999999999999999987766 44
No 130
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.89 E-value=1.8e-09 Score=87.95 Aligned_cols=91 Identities=20% Similarity=0.279 Sum_probs=79.9
Q ss_pred cccccCCCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCCCHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQA--------DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILM--------SPNDGN 189 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLel--------dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l--------dP~d~~ 189 (223)
|.+|...+++++|+.+|++++++ +|....++.++|.++. ..+++++|+.+|++++.+ +|....
T Consensus 50 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 128 (283)
T 3edt_B 50 ALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKFHPDVAK 128 (283)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 45566778999999999999988 4667788999996666 589999999999999998 577788
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 190 VLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 190 ~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
++..+|.+++. .|++++|+.+|++++++
T Consensus 129 ~~~~la~~~~~-~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 129 QLNNLALLCQN-QGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 89999988887 99999999999999987
No 131
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.87 E-value=4.1e-09 Score=77.90 Aligned_cols=69 Identities=17% Similarity=0.107 Sum_probs=61.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYG 195 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA 195 (223)
|.+|...+++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|++++..+|+++.+.....
T Consensus 34 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 34 GSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLY-NLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 456777899999999999999999999999999997776 589999999999999999999998765443
No 132
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.86 E-value=3.8e-09 Score=94.04 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=27.6
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMY 194 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~l 194 (223)
+++++|+.+|+++++.+|.+..++.++|.++. ..+++++|+.+|++|++.+|+++.++..+
T Consensus 227 ~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l 287 (472)
T 4g1t_A 227 EEEGEGEKLVEEALEKAPGVTDVLRSAAKFYR-RKDEPDKAIELLKKALEYIPNNAYLHCQI 287 (472)
T ss_dssp ---CHHHHHHHHHHHHCSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCccHHHHHHHHHHHHH-HcCchHHHHHHHHHHHHhCCChHHHHHHH
Confidence 34444555555555555555555545543333 34455555555555544444444444333
No 133
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.85 E-value=2.2e-08 Score=75.37 Aligned_cols=65 Identities=12% Similarity=0.017 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 156 LSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 156 l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
+..+|..+. ..+++++|+..|+++++.+|+++.++..+|.++.. .|++++|+..|+++++++|++
T Consensus 20 ~~~~g~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 20 PMEEGLSML-KLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE-NEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp HHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCC
Confidence 567886666 58999999999999999999999999999988887 999999999999999999986
No 134
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.84 E-value=5.8e-09 Score=89.87 Aligned_cols=94 Identities=12% Similarity=0.010 Sum_probs=73.3
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH------HHHH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDG------NVLS 192 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~------~~l~ 192 (223)
.|.+|.. +++++|+.+|++++++.|.. ..++.++|.++. .+++|++|+.+|++++.+.|++. .++.
T Consensus 122 lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 199 (307)
T 2ifu_A 122 AGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLV-RQQKFDEAAASLQKEKSMYKEMENYPTCYKKCI 199 (307)
T ss_dssp HHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHH
Confidence 3556767 89999999999999887654 567888996665 58999999999999998866542 3566
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 193 MYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 193 ~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.++.+++. .|++++|+.+|++++ ++|+.
T Consensus 200 ~~g~~~~~-~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 200 AQVLVQLH-RADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHh-CCCCC
Confidence 66655555 899999999999999 88753
No 135
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.84 E-value=2.3e-08 Score=70.87 Aligned_cols=64 Identities=17% Similarity=0.236 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 157 SNYARFLKEARGDLLKAEEYCARAILMSPNDGN-VLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 157 ~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~-~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.+.|..+. ..+++++|+.+|+++++.+|+++. ++..+|.+++. .|++++|+.+|+++++++|++
T Consensus 4 ~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~ 68 (99)
T 2kc7_A 4 LKTIKELI-NQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LGDWQKALNNYQSAIELNPDS 68 (99)
T ss_dssp HHHHHHHH-HHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCc
Confidence 45675555 589999999999999999999999 99999988887 999999999999999999986
No 136
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.83 E-value=2.9e-08 Score=84.46 Aligned_cols=91 Identities=9% Similarity=0.072 Sum_probs=76.2
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHH---HhCCCCH----HHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEARGDLLKAEEYCARAI---LMSPNDG----NVLSM 193 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL---~ldP~d~----~~l~~ 193 (223)
..|...+++++|+.+|+++++..+.. ..++.++|.++. .+++|++|+.+|++|+ +..|++. .++.+
T Consensus 123 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~n 201 (293)
T 2qfc_A 123 AYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYN 201 (293)
T ss_dssp HHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHh
Confidence 34555679999999999999876544 668999996666 5899999999999999 5567654 68899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC
Q 027439 194 YGDLIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 194 lA~ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
+|.+++. .|++++|+.+|++++++.
T Consensus 202 lg~~y~~-~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 202 HAKALYL-DSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 9988887 999999999999999874
No 137
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.82 E-value=6.7e-09 Score=86.06 Aligned_cols=93 Identities=11% Similarity=0.104 Sum_probs=80.2
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRN----PLLLSNYARFLKEARGDLLKAEEYCARAILM------SPNDGNVLSMYG 195 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n----~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l------dP~d~~~l~~lA 195 (223)
|..+...+++++|+.+|+++++.+|.+ ..++..+|.++. ..+++++|+.++++++.+ .|....++..+|
T Consensus 12 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~ 90 (338)
T 3ro2_A 12 GERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLG 90 (338)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHH
Confidence 345567789999999999999999999 467889996666 589999999999999988 555678899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC
Q 027439 196 DLIWQSHKDASRAESYFDQAVKAAP 220 (223)
Q Consensus 196 ~ll~~~~G~~eeAi~~fekAL~l~P 220 (223)
.+++. .|++++|+.+|++++++.+
T Consensus 91 ~~~~~-~g~~~~A~~~~~~al~~~~ 114 (338)
T 3ro2_A 91 NTLKV-LGNFDEAIVCCQRHLDISR 114 (338)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHH-ccCHHHHHHHHHHHHHHHH
Confidence 88877 9999999999999998743
No 138
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.81 E-value=1.2e-08 Score=88.88 Aligned_cols=91 Identities=15% Similarity=0.139 Sum_probs=81.0
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNP----LLLSNYARFLKEARGDLLKAEEYCARAILM------SPNDGNVLSMYG 195 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~----~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l------dP~d~~~l~~lA 195 (223)
|..|...+++++|+.+|+++++++|++. .++..+|.++. ..+++++|+.+|++++.+ +|....++..+|
T Consensus 55 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~ 133 (411)
T 4a1s_A 55 GERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLG 133 (411)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHH
Confidence 4455667999999999999999999997 57889997666 589999999999999998 677889999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Q 027439 196 DLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 196 ~ll~~~~G~~eeAi~~fekAL~l 218 (223)
.+++. .|++++|+.+|++++++
T Consensus 134 ~~~~~-~g~~~~A~~~~~~al~~ 155 (411)
T 4a1s_A 134 NTLKV-MGRFDEAAICCERHLTL 155 (411)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHH-CCCHHHHHHHHHHHHHH
Confidence 88887 99999999999999987
No 139
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.80 E-value=7.1e-09 Score=77.10 Aligned_cols=90 Identities=12% Similarity=0.063 Sum_probs=68.6
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNP------LLLSNYARFLKEARGDLLKAEEYCARAILMSPND------GNVLSMY 194 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~------~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d------~~~l~~l 194 (223)
..|...+++++|+.+|++++++.+... .++.++|.++. ..+++++|+.++++++.+.+.. ..++..+
T Consensus 17 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l 95 (164)
T 3ro3_A 17 NTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSL 95 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 445567788999999999888755322 46778886555 5789999999999888876543 5677788
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 195 GDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 195 A~ll~~~~G~~eeAi~~fekAL~l 218 (223)
|.+++. .|++++|+.+|+++++.
T Consensus 96 ~~~~~~-~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 96 GNTYTL-LQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhhHHHHHHHHHHHHHH
Confidence 877777 88999999999888865
No 140
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.79 E-value=6.3e-09 Score=88.62 Aligned_cols=92 Identities=12% Similarity=0.065 Sum_probs=76.8
Q ss_pred ccccccCCCChHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQA-------DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND------GNVL 191 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLel-------dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d------~~~l 191 (223)
-|.+|...+++++|+.+|+++++. .+....++.++|.++. .+++|++|+.++++|+++.+.. +.++
T Consensus 161 lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~-~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~ 239 (293)
T 3u3w_A 161 IANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY-LDSRYEESLYQVNKAIEISCRINSMALIGQLY 239 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 455677889999999999999952 2233568899997666 5899999999999999987554 7899
Q ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHh
Q 027439 192 SMYGDLIWQSHK-DASRAESYFDQAVKA 218 (223)
Q Consensus 192 ~~lA~ll~~~~G-~~eeAi~~fekAL~l 218 (223)
..+|.+++. .| ++++|+.+|++|+.+
T Consensus 240 ~~lg~~~~~-~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 240 YQRGECLRK-LEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHH-TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hCCcHHHHHHHHHHHHHH
Confidence 999988887 88 579999999999976
No 141
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.79 E-value=2.1e-08 Score=86.00 Aligned_cols=83 Identities=13% Similarity=0.144 Sum_probs=73.0
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHcCCHHHHHHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND--GNVLSMYGDLIWQSHKDASRAESY 211 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d--~~~l~~lA~ll~~~~G~~eeAi~~ 211 (223)
+.++|++.|+++++.+|+++.++.++|.++. ..|++++|+..|++++..+|++ ..++..++.++.. .|+.++|+..
T Consensus 200 ~~~~a~~~l~~al~~~P~~~~~~~~la~~l~-~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~-~g~~~~a~~~ 277 (287)
T 3qou_A 200 ADTPEIQQLQQQVAENPEDAALATQLALQLH-QVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAA-LGTGDALASX 277 (287)
T ss_dssp TSCHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHH-HCTTCHHHHH
T ss_pred ccCccHHHHHHHHhcCCccHHHHHHHHHHHH-HcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHH-cCCCCcHHHH
Confidence 3444667778888999999999999997666 5899999999999999999998 8899999987766 9999999999
Q ss_pred HHHHHHh
Q 027439 212 FDQAVKA 218 (223)
Q Consensus 212 fekAL~l 218 (223)
|++++..
T Consensus 278 ~r~al~~ 284 (287)
T 3qou_A 278 YRRQLYA 284 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
No 142
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.78 E-value=9.6e-09 Score=94.31 Aligned_cols=89 Identities=8% Similarity=-0.018 Sum_probs=73.5
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKD 204 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~ 204 (223)
-|.+|...++|++|+.+|+++++++|+++.+++++|.++. .+++|++|+.+|++|++++|++..++..++.++.. .++
T Consensus 323 la~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~-~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~-~~~ 400 (457)
T 1kt0_A 323 LAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQL-LMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKK-AKE 400 (457)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHH-HHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHH
Confidence 3566777899999999999999999999999999997777 58999999999999999999999999999987776 888
Q ss_pred HHHHHH-HHHHH
Q 027439 205 ASRAES-YFDQA 215 (223)
Q Consensus 205 ~eeAi~-~fekA 215 (223)
+++|.. .|++.
T Consensus 401 ~~~a~~~~~~~~ 412 (457)
T 1kt0_A 401 HNERDRRIYANM 412 (457)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH
Confidence 887764 34433
No 143
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.78 E-value=1.2e-08 Score=87.85 Aligned_cols=93 Identities=11% Similarity=0.094 Sum_probs=80.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNP----LLLSNYARFLKEARGDLLKAEEYCARAILM------SPNDGNVLSMYG 195 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~----~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l------dP~d~~~l~~lA 195 (223)
|..+...+++++|+.+|+++++++|.+. .++..+|.+++ ..+++++|+.+|++++.+ .|....++..+|
T Consensus 16 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la 94 (406)
T 3sf4_A 16 GERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLG 94 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 4556677999999999999999999984 67889996666 589999999999999887 455677899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC
Q 027439 196 DLIWQSHKDASRAESYFDQAVKAAP 220 (223)
Q Consensus 196 ~ll~~~~G~~eeAi~~fekAL~l~P 220 (223)
.+++. .|++++|+.+|++++++.|
T Consensus 95 ~~~~~-~g~~~~A~~~~~~al~~~~ 118 (406)
T 3sf4_A 95 NTLKV-LGNFDEAIVCCQRHLDISR 118 (406)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 88877 9999999999999998754
No 144
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.78 E-value=1.3e-08 Score=75.67 Aligned_cols=93 Identities=12% Similarity=0.109 Sum_probs=76.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC------CHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEARGDLLKAEEYCARAILMSPN------DGNVLSM 193 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~------d~~~l~~ 193 (223)
|.+|...+++++|+.+|++++++.+.. ..++.++|.++. ..+++++|+.++++++.+.+. ...++..
T Consensus 56 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 134 (164)
T 3ro3_A 56 GNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWS 134 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHH
Confidence 445667789999999999999876543 667889996666 589999999999999987432 2567888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 027439 194 YGDLIWQSHKDASRAESYFDQAVKAAP 220 (223)
Q Consensus 194 lA~ll~~~~G~~eeAi~~fekAL~l~P 220 (223)
+|.+++. .|++++|+.+|++++++..
T Consensus 135 la~~~~~-~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 135 LGNAYTA-LGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-ccCHHHHHHHHHHHHHHHH
Confidence 8988777 9999999999999998743
No 145
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.78 E-value=2.6e-09 Score=82.96 Aligned_cols=73 Identities=15% Similarity=-0.032 Sum_probs=63.7
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDG-NVLSMYGDLIW 199 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~-~~l~~lA~ll~ 199 (223)
|.+|...+++++|+.+|+++++++|.++.++.++|.++. .++++++|+..|+++++++|+++ .+...+..+..
T Consensus 70 a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~ 143 (162)
T 3rkv_A 70 SQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARI-AAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTE 143 (162)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHH-HHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 345667789999999999999999999999999997776 58999999999999999999999 66666665543
No 146
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.77 E-value=3.8e-08 Score=79.40 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=78.6
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARG---DLLKAEEYCARAILMS-P-NDGNVLSMYGDLIWQSHKDASR 207 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~g---dyeeA~~~~ekAL~ld-P-~d~~~l~~lA~ll~~~~G~~ee 207 (223)
.....+++.|++.++.+|.+..+.++||+++. +.. ++++|+.+++.+++.+ | ++.+.++.+|..+++ .++|++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv-~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k-l~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLV-RSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH-TCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-TSCHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH-ccCHHH
Confidence 35678899999999999999999999997666 455 7789999999999999 7 568999999988887 999999
Q ss_pred HHHHHHHHHHhCCCC
Q 027439 208 AESYFDQAVKAAPDD 222 (223)
Q Consensus 208 Ai~~fekAL~l~Pdn 222 (223)
|+.+++++++.+|+|
T Consensus 90 A~~y~~~lL~ieP~n 104 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQN 104 (152)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhcCCCC
Confidence 999999999999987
No 147
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.77 E-value=3.8e-08 Score=70.37 Aligned_cols=74 Identities=24% Similarity=0.323 Sum_probs=66.3
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQ 200 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~ 200 (223)
+.+|...+++++|+.+|+++++.+|.+..++.++|.++. ..+++++|+.+|++++..+|+++.++..++.++..
T Consensus 50 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 50 GNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 345566789999999999999999999999999997666 58999999999999999999999999999977654
No 148
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.77 E-value=4.2e-09 Score=90.75 Aligned_cols=92 Identities=13% Similarity=0.123 Sum_probs=75.7
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPR--N----PLLLSNYARFLKEARGDLLKAEEYCARAILMSPND------GNVLSM 193 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~--n----~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d------~~~l~~ 193 (223)
|.+|...+++++|+.+|++++++.+. + ..++.++|.++. . +++++|+.+|++|+.+.|.. ..++..
T Consensus 83 g~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~ 160 (307)
T 2ifu_A 83 GMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME-P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGK 160 (307)
T ss_dssp HHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT-T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHH
Confidence 35666778999999999999988532 2 467889995554 5 99999999999999998754 577888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 027439 194 YGDLIWQSHKDASRAESYFDQAVKAAP 220 (223)
Q Consensus 194 lA~ll~~~~G~~eeAi~~fekAL~l~P 220 (223)
+|.++.. .|++++|+.+|++++++.|
T Consensus 161 lg~~~~~-~g~~~~A~~~~~~al~~~~ 186 (307)
T 2ifu_A 161 ASRLLVR-QQKFDEAAASLQKEKSMYK 186 (307)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 9988777 9999999999999998754
No 149
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.77 E-value=5.8e-09 Score=86.52 Aligned_cols=92 Identities=15% Similarity=0.223 Sum_probs=80.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCCCHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQAD--------PRNPLLLSNYARFLKEARGDLLKAEEYCARAILM--------SPNDGN 189 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeld--------P~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l--------dP~d~~ 189 (223)
|.+|...+++++|+.+|++++++. |....++.++|.++. ..+++++|+.+|++++.+ +|....
T Consensus 118 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 196 (311)
T 3nf1_A 118 AVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ-NQGKYEEVEYYYQRALEIYQTKLGPDDPNVAK 196 (311)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 456677889999999999999884 666788999996666 589999999999999998 777788
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 027439 190 VLSMYGDLIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 190 ~l~~lA~ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
++..+|.+++. .|++++|+.+|+++++..
T Consensus 197 ~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 197 TKNNLASCYLK-QGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 89999988888 999999999999999763
No 150
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.76 E-value=1.5e-08 Score=88.79 Aligned_cols=92 Identities=13% Similarity=0.087 Sum_probs=79.8
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-----hC-CCCHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEARGDLLKAEEYCARAIL-----MS-PNDGNVLSM 193 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~-----ld-P~d~~~l~~ 193 (223)
|.+|...+++++|+.+|++++++.+.. ..++.++|.++. .++++++|+.+|++|+. .+ |..+.++..
T Consensus 191 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 269 (383)
T 3ulq_A 191 ATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKN-SQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFL 269 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence 456777899999999999999885543 258999996666 68999999999999999 56 888999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC
Q 027439 194 YGDLIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 194 lA~ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
+|.+++. .|++++|+.+|++++++.
T Consensus 270 l~~~~~~-~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 270 ITQIHYK-LGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 9988888 999999999999999873
No 151
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.75 E-value=9.4e-09 Score=87.52 Aligned_cols=91 Identities=10% Similarity=0.049 Sum_probs=73.3
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-------CCCCHHHHHHH
Q 027439 128 WDPNNHGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEARGDLLKAEEYCARAILM-------SPNDGNVLSMY 194 (223)
Q Consensus 128 ~Y~~~gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l-------dP~d~~~l~~l 194 (223)
+|...+++++|+.+|++++++.+.. ..++.++|.++. .+++|++|+.+|++|++. .+....++.++
T Consensus 124 ~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nl 202 (293)
T 3u3w_A 124 YVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNH 202 (293)
T ss_dssp HHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred HHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH
Confidence 3445569999999999999965433 347899996666 589999999999999952 22334678999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC
Q 027439 195 GDLIWQSHKDASRAESYFDQAVKAAP 220 (223)
Q Consensus 195 A~ll~~~~G~~eeAi~~fekAL~l~P 220 (223)
|.+++. +|++++|+.+|++|+++.+
T Consensus 203 g~~y~~-~~~y~~A~~~~~~al~~~~ 227 (293)
T 3u3w_A 203 AKALYL-DSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhHHHHHHHHHHHHHHHHH
Confidence 988888 9999999999999998753
No 152
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.75 E-value=1.3e-08 Score=79.91 Aligned_cols=90 Identities=10% Similarity=0.038 Sum_probs=66.1
Q ss_pred ccccCCCChHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh---CCCC----HHHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQ------ADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILM---SPND----GNVLSM 193 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLe------ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l---dP~d----~~~l~~ 193 (223)
.+|...+++++|+.+|+++++ ..|....++.++|.++. ..+++++|+.++++++.+ .+++ ..++..
T Consensus 34 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 112 (203)
T 3gw4_A 34 YVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER-MAGNWDAARRCFLEERELLASLPEDPLAASANAYE 112 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHH
Confidence 445566788888888888887 44555677888885555 578888888888888887 4433 455777
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 194 YGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 194 lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
+|.+++. .|++++|+.+|++++++
T Consensus 113 lg~~~~~-~g~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 113 VATVALH-FGDLAGARQEYEKSLVY 136 (203)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 7877776 88888888888888765
No 153
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.74 E-value=2.6e-08 Score=91.61 Aligned_cols=94 Identities=15% Similarity=0.222 Sum_probs=58.1
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNP-LLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~-~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
.++...+++++|+.+|+++++++|.++ .+|.+++.++. +.+++++|+.+|++|++..|.+..++...+.+.+...|++
T Consensus 329 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~ 407 (530)
T 2ooe_A 329 DYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDK 407 (530)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCH
T ss_pred HHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCCh
Confidence 444566889999999999999998885 58888886544 3455555555555555555554444444443333335555
Q ss_pred HHHHHHHHHHHHhCCC
Q 027439 206 SRAESYFDQAVKAAPD 221 (223)
Q Consensus 206 eeAi~~fekAL~l~Pd 221 (223)
++|+.+|+++++.+|+
T Consensus 408 ~~A~~~~e~al~~~p~ 423 (530)
T 2ooe_A 408 SVAFKIFELGLKKYGD 423 (530)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHCCC
Confidence 5555555555555554
No 154
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.74 E-value=2.2e-08 Score=89.94 Aligned_cols=84 Identities=14% Similarity=0.051 Sum_probs=74.2
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
|.+|...+++++|+.+|+++++++|+++.++.++|.++. .++++++|+.+|++|++++|++..++..++.++.. .+++
T Consensus 280 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~-~~~~ 357 (370)
T 1ihg_A 280 GACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQ-GLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK-IKAQ 357 (370)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHH
Confidence 455667899999999999999999999999999997766 58999999999999999999999999999987766 7777
Q ss_pred HHHHHH
Q 027439 206 SRAESY 211 (223)
Q Consensus 206 eeAi~~ 211 (223)
++|...
T Consensus 358 ~~a~k~ 363 (370)
T 1ihg_A 358 KDKEKA 363 (370)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 776543
No 155
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.72 E-value=2.7e-08 Score=84.66 Aligned_cols=91 Identities=14% Similarity=0.053 Sum_probs=77.2
Q ss_pred cccccCCCChHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC------CHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMI---QADPRNP----LLLSNYARFLKEARGDLLKAEEYCARAILMSPN------DGNVLS 192 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aL---eldP~n~----~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~------d~~~l~ 192 (223)
|.+|...+++++|+.+|++++ +..|++. .++.++|.++. .+++|++|+.+|++|+.+.++ ...++.
T Consensus 162 g~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~-~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~ 240 (293)
T 2qfc_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY-LDSRYEESLYQVNKAIEISCRINSMALIGQLYY 240 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHH-HHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 567777899999999999999 5567653 68899996666 689999999999999988643 278899
Q ss_pred HHHHHHHHHcCCHHHH-HHHHHHHHHh
Q 027439 193 MYGDLIWQSHKDASRA-ESYFDQAVKA 218 (223)
Q Consensus 193 ~lA~ll~~~~G~~eeA-i~~fekAL~l 218 (223)
.+|.++.. .|++++| ..+|++|+.+
T Consensus 241 ~lg~~y~~-~g~~~~Ai~~~~~~Al~~ 266 (293)
T 2qfc_A 241 QRGECLRK-LEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHH-TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCcHHHHHHHHHHHHHH
Confidence 99988777 9999999 8889999876
No 156
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.72 E-value=1.1e-07 Score=67.45 Aligned_cols=69 Identities=17% Similarity=0.077 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 152 NPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 152 n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.+..+..+|..+. ..+++++|+.+|++++..+|+++.++..+|.+++. .+++++|+.+|+++++.+|++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~ 71 (118)
T 1elw_A 3 QVNELKEKGNKAL-SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK-KGDYQKAYEDGCKTVDLKPDW 71 (118)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhCccc
Confidence 3567888996666 58999999999999999999999999999988887 999999999999999999875
No 157
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.72 E-value=3.7e-08 Score=87.34 Aligned_cols=88 Identities=11% Similarity=0.155 Sum_probs=78.1
Q ss_pred CChHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHcCC
Q 027439 133 HGNNSTDLYYQKMIQADPR--NPLLLSNYARFLKEAR-----GDLLKAEEYCARAILMSPND-GNVLSMYGDLIWQSHKD 204 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~--n~~~l~nlA~~l~~~~-----gdyeeA~~~~ekAL~ldP~d-~~~l~~lA~ll~~~~G~ 204 (223)
....+|...+++++++||+ +..+|..+|. +|... |+.++|.++|+||++++|+. ..++..||..+....++
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~-lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd 255 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTK-FYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN 255 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHH-HHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHH-HHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC
Confidence 4778999999999999999 6779999994 55443 89999999999999999975 99999999987774699
Q ss_pred HHHHHHHHHHHHHhCCC
Q 027439 205 ASRAESYFDQAVKAAPD 221 (223)
Q Consensus 205 ~eeAi~~fekAL~l~Pd 221 (223)
+++|..++++|++.+|.
T Consensus 256 ~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 256 RAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 99999999999998775
No 158
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=8.7e-08 Score=71.22 Aligned_cols=74 Identities=15% Similarity=0.052 Sum_probs=67.3
Q ss_pred HhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 147 QADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND---GNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 147 eldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d---~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
..+|.++..+..+|..++ ..+++++|+.+|+++++.+|++ ..++..+|.+++. .+++++|+.+|+++++++|++
T Consensus 22 ~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELF-KCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEKDGGD 98 (148)
T ss_dssp CTTCCCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTSCC
T ss_pred ccchHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhCccC
Confidence 467889999999997666 5899999999999999999988 8999999988777 999999999999999999875
No 159
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.72 E-value=1e-07 Score=79.25 Aligned_cols=84 Identities=18% Similarity=0.262 Sum_probs=46.0
Q ss_pred ccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---
Q 027439 129 DPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEA----RGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQS--- 201 (223)
Q Consensus 129 Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~----~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~--- 201 (223)
|...+++++|+.+|+++++ |+++.++.++|.++. . .+++++|+.+|+++++.+ ++.++..+|.+ +..
T Consensus 16 ~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~-~~~g~~ 89 (273)
T 1ouv_A 16 SYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYY-QGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNL-YYSGQG 89 (273)
T ss_dssp HHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHH-HHHTSS
T ss_pred HHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHH-cCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHH-HhCCCC
Confidence 3444556666666666655 555555556663333 4 456666666666665553 55555555533 333
Q ss_pred -cCCHHHHHHHHHHHHHh
Q 027439 202 -HKDASRAESYFDQAVKA 218 (223)
Q Consensus 202 -~G~~eeAi~~fekAL~l 218 (223)
.+++++|+.+|+++++.
T Consensus 90 ~~~~~~~A~~~~~~a~~~ 107 (273)
T 1ouv_A 90 VSQNTNKALQYYSKACDL 107 (273)
T ss_dssp SCCCHHHHHHHHHHHHHT
T ss_pred cccCHHHHHHHHHHHHHc
Confidence 45566666666665544
No 160
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.71 E-value=7.6e-08 Score=91.52 Aligned_cols=87 Identities=10% Similarity=0.091 Sum_probs=77.3
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-
Q 027439 135 NNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGD----------LLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK- 203 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gd----------yeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G- 203 (223)
.++|+++++++++++|++..+|+.++.++.. .++ +++|+++++++++.+|++..+|...++++.. .+
T Consensus 45 ~eeal~~~~~~l~~nP~~~taW~~R~~~l~~-l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~-l~~ 122 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATLWNCRREVLQH-LETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR-LPE 122 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-CSS
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHh-cccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccc
Confidence 4788999999999999999999999977764 666 9999999999999999999999999988777 88
Q ss_pred -CHHHHHHHHHHHHHhCCCCC
Q 027439 204 -DASRAESYFDQAVKAAPDDW 223 (223)
Q Consensus 204 -~~eeAi~~fekAL~l~Pdn~ 223 (223)
++++|+++++++++++|.|+
T Consensus 123 ~~~~~el~~~~k~l~~d~~N~ 143 (567)
T 1dce_A 123 PNWARELELCARFLEADERNF 143 (567)
T ss_dssp CCHHHHHHHHHHHHHHCTTCH
T ss_pred ccHHHHHHHHHHHHhhccccc
Confidence 67999999999999999874
No 161
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.70 E-value=6.5e-08 Score=79.15 Aligned_cols=86 Identities=13% Similarity=0.068 Sum_probs=68.9
Q ss_pred CCChHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC--
Q 027439 132 NHGNNSTDLYYQKMIQADP--RNPLLLSNYARFLKEA----RGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK-- 203 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeldP--~n~~~l~nlA~~l~~~----~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G-- 203 (223)
.+++++|+.+|+++++..| .++.++.++|.++. . .+++++|+.+|++|+++ |.++.++..+|.++..-.+
T Consensus 102 ~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~-~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~ 179 (212)
T 3rjv_A 102 ATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYA-SGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGF 179 (212)
T ss_dssp SCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHH-HTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTT
T ss_pred ccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCC
Confidence 4588999999999998888 45888889995544 4 56899999999999988 6778888889976665223
Q ss_pred ---CHHHHHHHHHHHHHhC
Q 027439 204 ---DASRAESYFDQAVKAA 219 (223)
Q Consensus 204 ---~~eeAi~~fekAL~l~ 219 (223)
++++|+.+|++|++..
T Consensus 180 ~~~d~~~A~~~~~~A~~~g 198 (212)
T 3rjv_A 180 IEPNKQKALHWLNVSCLEG 198 (212)
T ss_dssp BCCCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcC
Confidence 8999999999998764
No 162
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.69 E-value=3.1e-08 Score=86.98 Aligned_cols=94 Identities=12% Similarity=-0.011 Sum_probs=81.0
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-----hCCCCHHHHHH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADP------RNPLLLSNYARFLKEARGDLLKAEEYCARAIL-----MSPNDGNVLSM 193 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP------~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~-----ldP~d~~~l~~ 193 (223)
-|.+|...+++++|+.+|++++++.+ ....++.++|.++. .++++++|+.+|++|+. .+|....++..
T Consensus 188 lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 266 (378)
T 3q15_A 188 IAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYD-RSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFG 266 (378)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHH
Confidence 34566778999999999999998643 12467899996666 58999999999999999 88888999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 027439 194 YGDLIWQSHKDASRAESYFDQAVKAAP 220 (223)
Q Consensus 194 lA~ll~~~~G~~eeAi~~fekAL~l~P 220 (223)
+|.+++. .|++++|+.+|++++++.+
T Consensus 267 la~~~~~-~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 267 LSWTLCK-AGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 9988888 9999999999999999854
No 163
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.66 E-value=1.3e-07 Score=83.77 Aligned_cols=88 Identities=11% Similarity=0.081 Sum_probs=80.6
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH----HHHc---CC
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARG--DLLKAEEYCARAILMSPNDGNVLSMYGDLI----WQSH---KD 204 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~g--dyeeA~~~~ekAL~ldP~d~~~l~~lA~ll----~~~~---G~ 204 (223)
..++|+++++++|.++|++..+|+.++.++.. ++ +++++++++++++..+|++..+|...+.++ .. . ++
T Consensus 48 ~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~-l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~-l~~~~~ 125 (306)
T 3dra_A 48 YSERALHITELGINELASHYTIWIYRFNILKN-LPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMEL-NNNDFD 125 (306)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-CTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH-TTTCCC
T ss_pred CCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHH-cccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHh-ccccCC
Confidence 44799999999999999999999999987774 77 999999999999999999999999999887 44 5 78
Q ss_pred HHHHHHHHHHHHHhCCCCC
Q 027439 205 ASRAESYFDQAVKAAPDDW 223 (223)
Q Consensus 205 ~eeAi~~fekAL~l~Pdn~ 223 (223)
+++++..++++++.+|.|+
T Consensus 126 ~~~EL~~~~~~l~~~pkny 144 (306)
T 3dra_A 126 PYREFDILEAMLSSDPKNH 144 (306)
T ss_dssp THHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999874
No 164
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.65 E-value=1.3e-07 Score=69.24 Aligned_cols=74 Identities=9% Similarity=0.009 Sum_probs=64.2
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRN---PLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQ 200 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n---~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~ 200 (223)
|.+|...+++++|+.+|+++++.+|++ +.++.++|.++. .++++++|+.+|++++..+|+++.+......+...
T Consensus 46 g~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 46 GESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQY-GEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 455677889999999999999999999 899999997666 58999999999999999999999887766654433
No 165
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.65 E-value=2.2e-07 Score=77.21 Aligned_cols=82 Identities=15% Similarity=0.208 Sum_probs=59.1
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----cC
Q 027439 132 NHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEA----RGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQS----HK 203 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~----~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~----~G 203 (223)
.+++++|+.+|+++++.+ ++.++.++|.++. . .+++++|+.+|+++++. +++.++..+|.+ +.. .+
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~-~~~~~~~~~ 128 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYY-SGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGI-YHDGKVVTR 128 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHH-HHHCSSSCC
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHh-CCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHH-HHcCCCccc
Confidence 457788888888887775 6777777874444 5 67788888888888776 367777777754 333 67
Q ss_pred CHHHHHHHHHHHHHhC
Q 027439 204 DASRAESYFDQAVKAA 219 (223)
Q Consensus 204 ~~eeAi~~fekAL~l~ 219 (223)
++++|+.+|+++++.+
T Consensus 129 ~~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 129 DFKKAVEYFTKACDLN 144 (273)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcC
Confidence 7888888888877654
No 166
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.64 E-value=1.3e-07 Score=86.86 Aligned_cols=86 Identities=16% Similarity=0.244 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH------hCCHH-------HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHH
Q 027439 136 NSTDLYYQKMIQADPRNPLLLSNYARFLKEA------RGDLL-------KAEEYCARAIL-MSPNDGNVLSMYGDLIWQS 201 (223)
Q Consensus 136 ~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~------~gdye-------eA~~~~ekAL~-ldP~d~~~l~~lA~ll~~~ 201 (223)
.+++.+|++++..+|.++.+|.++|.++... .|+++ +|+..|++|+. ++|++..+|..++.++..
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~- 333 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES- 333 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh-
Confidence 4777888999988898898888888665531 57776 88888999987 788888888888877666
Q ss_pred cCCHHHHHHHHHHHHHhCCCC
Q 027439 202 HKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 202 ~G~~eeAi~~fekAL~l~Pdn 222 (223)
.|++++|+..|+++++++|++
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~ 354 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDID 354 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSC
T ss_pred cCCHHHHHHHHHHHhCccccC
Confidence 888999999999988888764
No 167
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.64 E-value=7.4e-08 Score=69.57 Aligned_cols=69 Identities=10% Similarity=0.169 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 151 RNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 151 ~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
..+..+..+|..++ ..+++++|+.+|++++..+|+++.++..+|.+++. .|++++|+.+|++++...|+
T Consensus 2 ~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~ 70 (131)
T 1elr_A 2 KQALKEKELGNDAY-KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-KGDYNKCRELCEKAIEVGRE 70 (131)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhccc
Confidence 34667889996666 58999999999999999999999999999988887 99999999999999998764
No 168
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.63 E-value=1.3e-07 Score=83.69 Aligned_cols=89 Identities=10% Similarity=0.061 Sum_probs=81.7
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH---HHh---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH-
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLK---EAR---GDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS- 206 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~---~~~---gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e- 206 (223)
+++++++++++++..+|.+..+|+.++.++. ... +++++++++|+++++.+|+|..+|...++++.. .++++
T Consensus 84 ~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~-l~~~~~ 162 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDT-FDLHND 162 (306)
T ss_dssp CHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCTTC
T ss_pred cHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hcccCh
Confidence 8999999999999999999999999997771 235 789999999999999999999999999988777 89888
Q ss_pred -HHHHHHHHHHHhCCCCC
Q 027439 207 -RAESYFDQAVKAAPDDW 223 (223)
Q Consensus 207 -eAi~~fekAL~l~Pdn~ 223 (223)
+++++++++++.+|.|+
T Consensus 163 ~~EL~~~~~~i~~d~~N~ 180 (306)
T 3dra_A 163 AKELSFVDKVIDTDLKNN 180 (306)
T ss_dssp HHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 99999999999999884
No 169
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.63 E-value=5.3e-08 Score=83.73 Aligned_cols=91 Identities=12% Similarity=0.086 Sum_probs=71.5
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEARGDLLKAEEYCARAILMSPND------GNVLSM 193 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d------~~~l~~ 193 (223)
|.+|...+++++|+.+|++++++.|.. ..++.++|.++. ..+++++|+.+|++++.+.+.. ..++..
T Consensus 234 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 312 (406)
T 3sf4_A 234 GNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWS 312 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 345666778888988888888877665 677888886555 5788999999988888875544 667788
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 194 YGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 194 lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
+|.++.. .|++++|+.+|++++++
T Consensus 313 la~~~~~-~g~~~~A~~~~~~al~~ 336 (406)
T 3sf4_A 313 LGNAYTA-LGNHDQAMHFAEKHLEI 336 (406)
T ss_dssp HHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 8877777 88899999998888876
No 170
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.62 E-value=1.8e-08 Score=88.29 Aligned_cols=90 Identities=12% Similarity=0.085 Sum_probs=63.8
Q ss_pred cccCCCChHHHHHHHHHHHHh---CC---CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC-------HHHHHHH
Q 027439 128 WDPNNHGNNSTDLYYQKMIQA---DP---RNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND-------GNVLSMY 194 (223)
Q Consensus 128 ~Y~~~gd~~eA~~~y~~aLel---dP---~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d-------~~~l~~l 194 (223)
.|...+++++|+.+|++++++ .+ ..+.++.++|.+++ ..+++++|+.++++|+++.+.. ..++..+
T Consensus 112 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~l 190 (383)
T 3ulq_A 112 YELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYY-YMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLF 190 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 344556888888888888876 22 24577788885555 4788888888888888774433 3467777
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC
Q 027439 195 GDLIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 195 A~ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
|.++.. .|++++|+.+|++|+++.
T Consensus 191 g~~~~~-~g~~~~A~~~~~~al~~~ 214 (383)
T 3ulq_A 191 ATNFLD-LKQYEDAISHFQKAYSMA 214 (383)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHH-hcCHHHHHHHHHHHHHHH
Confidence 766666 888888888888887663
No 171
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.62 E-value=7.4e-08 Score=69.74 Aligned_cols=60 Identities=8% Similarity=0.106 Sum_probs=54.1
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPN 186 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~ 186 (223)
|.+|...+++++|+.+|+++++++|+++.++.++|.++. ..+++++|++.|++++++.|+
T Consensus 14 g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 14 AQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYE-RLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhc
Confidence 456677899999999999999999999999999996666 689999999999999998764
No 172
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.62 E-value=1.6e-07 Score=80.28 Aligned_cols=71 Identities=13% Similarity=0.016 Sum_probs=65.9
Q ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 150 PRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 150 P~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
|.++..+..+|..++ ..++|++|+.+|++|+..+|+++.++..+|.+++. .|++++|+..|+++++++|++
T Consensus 1 p~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~~ 71 (281)
T 2c2l_A 1 SPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCRRALELDGQS 71 (281)
T ss_dssp CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTSCTTC
T ss_pred ChhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCC
Confidence 677889999997776 58999999999999999999999999999988887 999999999999999999986
No 173
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.61 E-value=3.6e-08 Score=81.60 Aligned_cols=92 Identities=11% Similarity=0.062 Sum_probs=64.5
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEARGDLLKAEEYCARAILMSPND------GNVLSMY 194 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d------~~~l~~l 194 (223)
.+|...+++++|+.+|++++++.+.. ..++..+|.++. ..+++++|+.++++++.+.+.. ..++..+
T Consensus 231 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l 309 (338)
T 3ro2_A 231 NAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSL 309 (338)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 44455677888888888888776554 667777775555 4788888888888887765432 4466777
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC
Q 027439 195 GDLIWQSHKDASRAESYFDQAVKAAP 220 (223)
Q Consensus 195 A~ll~~~~G~~eeAi~~fekAL~l~P 220 (223)
|.++.. .|++++|+.+|++++++.+
T Consensus 310 a~~~~~-~g~~~~A~~~~~~a~~~~~ 334 (338)
T 3ro2_A 310 GNAYTA-LGNHDQAMHFAEKHLEISR 334 (338)
T ss_dssp HHHHHH-HTCHHHHHHHHHHHHHC--
T ss_pred HHHHHH-cCChHHHHHHHHHHHHHHH
Confidence 766666 7888888888888887654
No 174
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.60 E-value=5.7e-08 Score=76.20 Aligned_cols=91 Identities=16% Similarity=0.148 Sum_probs=73.2
Q ss_pred cccccCCCChHHHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC--CCH----HHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQA---DPRN----PLLLSNYARFLKEARGDLLKAEEYCARAILMSP--NDG----NVLS 192 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLel---dP~n----~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP--~d~----~~l~ 192 (223)
|.+|...+++++|+.+|++++++ .+++ ..++.++|.++. ..+++++|+.++++++.+.+ .+. .++.
T Consensus 73 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 151 (203)
T 3gw4_A 73 GMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL-HFGDLAGARQEYEKSLVYAQQADDQVAIACAFR 151 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 34566778999999999999998 4433 567889996666 58999999999999997642 233 3457
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 193 MYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 193 ~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
.+|.+++. .|++++|+.+|++++++
T Consensus 152 ~la~~~~~-~g~~~~A~~~~~~al~~ 176 (203)
T 3gw4_A 152 GLGDLAQQ-EKNLLEAQQHWLRARDI 176 (203)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CcCHHHHHHHHHHHHHH
Confidence 88877777 99999999999999876
No 175
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.60 E-value=1.2e-07 Score=76.85 Aligned_cols=59 Identities=10% Similarity=0.104 Sum_probs=52.1
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHHhCCCCHHHHHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEAR-----------GDLLKAEEYCARAILMSPNDGNVLSM 193 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~-----------gdyeeA~~~~ekAL~ldP~d~~~l~~ 193 (223)
.+++|+.+|+++|+++|++..+|+++|.++.. + +++++|+++|++|++++|++......
T Consensus 61 ~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~-lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~a 130 (158)
T 1zu2_A 61 MIQEAITKFEEALLIDPKKDEAVWCIGNAYTS-FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKS 130 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH-hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 47899999999999999999999999988874 4 48999999999999999998755443
No 176
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.60 E-value=1.8e-07 Score=89.00 Aligned_cols=86 Identities=9% Similarity=0.087 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHH
Q 027439 135 NNSTDLYYQKMIQADPRNPLLLSNYARFLKEARG--DLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK-DASRAESY 211 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~g--dyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G-~~eeAi~~ 211 (223)
+++|+++|+++++.+|++..+|..++.++. +.+ ++++|+++|+++++++|+|..+|...+.++.. .+ .+++|+++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~-~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~-l~~~~~~el~~ 166 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHH-cCCChHHHHHH
Confidence 899999999999999999999999996666 578 77999999999999999999999999988887 77 99999999
Q ss_pred HHHHHHhCCCC
Q 027439 212 FDQAVKAAPDD 222 (223)
Q Consensus 212 fekAL~l~Pdn 222 (223)
++++++.+|+|
T Consensus 167 ~~~~I~~~p~n 177 (567)
T 1dce_A 167 TDSLITRNFSN 177 (567)
T ss_dssp HHTTTTTTCCC
T ss_pred HHHHHHHCCCC
Confidence 99999999987
No 177
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.59 E-value=5.2e-08 Score=84.88 Aligned_cols=93 Identities=13% Similarity=0.050 Sum_probs=70.9
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEARGDLLKAEEYCARAILMSPND------GNVLSM 193 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d------~~~l~~ 193 (223)
+.+|...+++++|+.+|++++++.+.. ..++.++|.++. ..+++++|+.+|++++.+.+.. ..++..
T Consensus 270 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 348 (411)
T 4a1s_A 270 GNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYT-LLHEFNTAIEYHNRHLAIAQELGDRIGEARACWS 348 (411)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHH
Confidence 445666778888888888888877654 677788886555 5788888888888888875432 457778
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 027439 194 YGDLIWQSHKDASRAESYFDQAVKAAP 220 (223)
Q Consensus 194 lA~ll~~~~G~~eeAi~~fekAL~l~P 220 (223)
+|.++.. .|++++|+.+|++++++.+
T Consensus 349 la~~~~~-~g~~~~A~~~~~~al~~~~ 374 (411)
T 4a1s_A 349 LGNAHSA-IGGHERALKYAEQHLQLAX 374 (411)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHH-hccHHHHHHHHHHHHHHHh
Confidence 8877776 8888888888888887754
No 178
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.59 E-value=1.2e-07 Score=87.73 Aligned_cols=85 Identities=13% Similarity=0.025 Sum_probs=70.9
Q ss_pred CCChHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCHHH---HHHHH
Q 027439 132 NHGNNSTDLYYQKMIQA-----DPRNP---LLLSNYARFLKEARGDLLKAEEYCARAILM-----SPNDGNV---LSMYG 195 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLel-----dP~n~---~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l-----dP~d~~~---l~~lA 195 (223)
.|+|++|+.+|++++++ .|+++ .++.++|.++. .+|+|++|+.+|++++++ .|+++.+ +.++|
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCL-YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 46899999999999984 56665 56889996666 589999999999999986 4666654 77788
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Q 027439 196 DLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 196 ~ll~~~~G~~eeAi~~fekAL~l 218 (223)
.+++. +|++++|+.+|+||+++
T Consensus 390 ~~~~~-qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 390 RLYMG-LENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHh-ccCHHHHHHHHHHHHHH
Confidence 77777 99999999999999986
No 179
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.58 E-value=9.7e-07 Score=67.98 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=74.6
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEA----RGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQ 200 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~----~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~ 200 (223)
-|.+|....++++|+.+|+++.+. .++.++.++|.++. . .+++++|+++|++|.+. .++.++..+|.++..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYE-NGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHH-cCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 345666667888899999999987 78999999995554 4 68999999999999986 689999999965443
Q ss_pred H---cCCHHHHHHHHHHHHHhC
Q 027439 201 S---HKDASRAESYFDQAVKAA 219 (223)
Q Consensus 201 ~---~G~~eeAi~~fekAL~l~ 219 (223)
- .+++++|+.+|++|.+..
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCCcCHHHHHHHHHHHHHCC
Confidence 1 689999999999998874
No 180
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.58 E-value=2.4e-07 Score=75.14 Aligned_cols=68 Identities=19% Similarity=0.172 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--
Q 027439 153 PLLLSNYARFLKEARGDLLKAEEYCARAILMSPN-------DGN-----VLSMYGDLIWQSHKDASRAESYFDQAVKA-- 218 (223)
Q Consensus 153 ~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~-------d~~-----~l~~lA~ll~~~~G~~eeAi~~fekAL~l-- 218 (223)
+..+.+.|..++ ..|+|++|+..|++||+++|+ +.. +|.++|.++.. +|++++|+..|++|+++
T Consensus 11 a~~~~~~G~~l~-~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 11 AYLALSDAQRQL-VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhh
Confidence 456788997777 589999999999999999999 544 99999987777 99999999999999999
Q ss_pred -----CCCC
Q 027439 219 -----APDD 222 (223)
Q Consensus 219 -----~Pdn 222 (223)
+|++
T Consensus 89 ~~~e~~pd~ 97 (159)
T 2hr2_A 89 RRGELNQDE 97 (159)
T ss_dssp HHCCTTSTH
T ss_pred ccccCCCch
Confidence 9974
No 181
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.55 E-value=1.5e-07 Score=88.37 Aligned_cols=88 Identities=14% Similarity=0.084 Sum_probs=72.5
Q ss_pred ccCCCChHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCHHH---HH
Q 027439 129 DPNNHGNNSTDLYYQKMIQA-----DPRN---PLLLSNYARFLKEARGDLLKAEEYCARAILM-----SPNDGNV---LS 192 (223)
Q Consensus 129 Y~~~gd~~eA~~~y~~aLel-----dP~n---~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l-----dP~d~~~---l~ 192 (223)
+..+|+|++|+.+|++++++ .|++ +.++.++|.++. .+|+|++|+.+|++++++ .|+++.+ +.
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~ 397 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLS-YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVM 397 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 34678999999999999985 4555 467889996666 589999999999999986 4666654 67
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 193 MYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 193 ~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
++|.+++. +|++++|+.+|++|+++
T Consensus 398 nLa~~~~~-~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 398 RAGLTNWH-AGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 77877777 99999999999999976
No 182
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.55 E-value=7e-07 Score=81.45 Aligned_cols=87 Identities=11% Similarity=0.045 Sum_probs=72.4
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHH-------------------------------------------HHHhCC
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFL-------------------------------------------KEARGD 169 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l-------------------------------------------~~~~gd 169 (223)
.++.+|+.+|+++++++|+++.++..++.++ ....++
T Consensus 213 ~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd 292 (372)
T 3ly7_A 213 KSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGK 292 (372)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCC
Confidence 4568899999999999999988777544322 123689
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 170 LLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 170 yeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
+++|+.++++|+.++| +..++..+|.++.. .|++++|++.|++|+.++|.
T Consensus 293 ~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~-~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 293 TDESYQAINTGIDLEM-SWLNYVLLGKVYEM-KGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp HHHHHHHHHHHHHHCC-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhcCC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999997 57778888877777 99999999999999999986
No 183
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.53 E-value=3.3e-07 Score=82.89 Aligned_cols=89 Identities=9% Similarity=0.055 Sum_probs=81.1
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CHHHHHHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARG-DLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK-DASRAESY 211 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~g-dyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G-~~eeAi~~ 211 (223)
..++|+++++++|.++|++..+|+.++.++.. .+ +++++++++++++..+|++..+|...++++....+ ++++++.+
T Consensus 69 ~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~-l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~ 147 (349)
T 3q7a_A 69 KSERALELTEIIVRMNPAHYTVWQYRFSLLTS-LNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEY 147 (349)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHH
Confidence 45789999999999999999999999977774 67 69999999999999999999999999988887337 89999999
Q ss_pred HHHHHHhCCCCC
Q 027439 212 FDQAVKAAPDDW 223 (223)
Q Consensus 212 fekAL~l~Pdn~ 223 (223)
++++++.+|.|+
T Consensus 148 ~~k~L~~dpkNy 159 (349)
T 3q7a_A 148 IHGSLLPDPKNY 159 (349)
T ss_dssp HHHHTSSCTTCH
T ss_pred HHHHHHhCCCCH
Confidence 999999999874
No 184
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.52 E-value=2.6e-07 Score=75.58 Aligned_cols=83 Identities=16% Similarity=0.088 Sum_probs=67.8
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHH---cC
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEA----RGDLLKAEEYCARAILMSP--NDGNVLSMYGDLIWQS---HK 203 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~----~gdyeeA~~~~ekAL~ldP--~d~~~l~~lA~ll~~~---~G 203 (223)
.++++|+.+|++++ ++.++.++.++|.++. . .+++++|+.+|++|++..| +++.++..+|.++..- .+
T Consensus 67 ~~~~~A~~~~~~A~--~~g~~~a~~~Lg~~y~-~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~ 143 (212)
T 3rjv_A 67 ADYPQARQLAEKAV--EAGSKSGEIVLARVLV-NRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPE 143 (212)
T ss_dssp CCHHHHHHHHHHHH--HTTCHHHHHHHHHHHT-CGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSC
T ss_pred CCHHHHHHHHHHHH--HCCCHHHHHHHHHHHH-cCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCC
Confidence 38999999999985 4678999999995544 3 5799999999999999888 3588999999655441 56
Q ss_pred CHHHHHHHHHHHHHh
Q 027439 204 DASRAESYFDQAVKA 218 (223)
Q Consensus 204 ~~eeAi~~fekAL~l 218 (223)
++++|+.+|++|++.
T Consensus 144 d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 144 DDVKASEYFKGSSSL 158 (212)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHc
Confidence 899999999999887
No 185
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.52 E-value=7.6e-07 Score=79.86 Aligned_cols=88 Identities=13% Similarity=0.008 Sum_probs=63.6
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc----------
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGD-LLKAEEYCARAILMSPNDGNVLSMYGDLIWQSH---------- 202 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gd-yeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~---------- 202 (223)
++++++++++++++.+|.|..+|...+.++. ..+. ++++++++.++|+.+|.|..+|...+.++....
T Consensus 125 ~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~-~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~ 203 (331)
T 3dss_A 125 NWARELELCARFLEADERNFHCWDYRRFVAA-QAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGR 203 (331)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------C
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccc
Confidence 4677777777777778877777777775444 4566 577777778888778877777777776665521
Q ss_pred ---CCHHHHHHHHHHHHHhCCCC
Q 027439 203 ---KDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 203 ---G~~eeAi~~fekAL~l~Pdn 222 (223)
+.++++++++++++..+|+|
T Consensus 204 ~~~~~~~eEle~~~~ai~~~P~d 226 (331)
T 3dss_A 204 LPENVLLKELELVQNAFFTDPND 226 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHHSTTC
T ss_pred cchHHHHHHHHHHHHHHHhCCCC
Confidence 34677777788887777775
No 186
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.51 E-value=2.1e-07 Score=67.88 Aligned_cols=61 Identities=11% Similarity=0.128 Sum_probs=54.8
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND 187 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d 187 (223)
|.+|...+++++|+.+|+++++++|.+..++.++|.++. ..+++++|+.+|++++.++|++
T Consensus 26 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 26 GKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQ-GQGDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhcccc
Confidence 456677899999999999999999999999999997666 5899999999999999998853
No 187
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.49 E-value=1.7e-06 Score=77.51 Aligned_cols=88 Identities=9% Similarity=0.075 Sum_probs=80.1
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-HHHHHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARG--DLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKD-ASRAES 210 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~g--dyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~-~eeAi~ 210 (223)
.+++++.+++.++..+|.+..+|...+.++. ..+ ++++++.+|.++++.+|.|..+|...+.++.. .+. ++++++
T Consensus 89 ~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~-~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~-l~~~~~eel~ 166 (331)
T 3dss_A 89 LVKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELA 166 (331)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCcCHHHHHH
Confidence 3789999999999999999999999996665 577 49999999999999999999999999988777 787 699999
Q ss_pred HHHHHHHhCCCCC
Q 027439 211 YFDQAVKAAPDDW 223 (223)
Q Consensus 211 ~fekAL~l~Pdn~ 223 (223)
++++++..+|.|+
T Consensus 167 ~~~~~I~~~p~N~ 179 (331)
T 3dss_A 167 FTDSLITRNFSNY 179 (331)
T ss_dssp HHHHHHHHCSCCH
T ss_pred HHHHHHHHCCCCH
Confidence 9999999999873
No 188
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.44 E-value=1.9e-06 Score=63.40 Aligned_cols=69 Identities=14% Similarity=0.140 Sum_probs=55.2
Q ss_pred cccccCCCChHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQAD-------PRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYG 195 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeld-------P~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA 195 (223)
|..+...++|..|+..|++|++.. +..+.++.++|.+++ ++|++++|+.++++|++++|++..++.++.
T Consensus 12 G~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 12 GKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 445566788999999999988753 345788888886666 588999999999999999999988877776
No 189
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.42 E-value=3.9e-07 Score=80.19 Aligned_cols=92 Identities=7% Similarity=-0.192 Sum_probs=75.2
Q ss_pred cccCCCChHHHHHHHHHHHHhC-CCC-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHc
Q 027439 128 WDPNNHGNNSTDLYYQKMIQAD-PRN-PLLLSNYARFLKEARGDLLKAEEYCARAILMS--PN-DGNVLSMYGDLIWQSH 202 (223)
Q Consensus 128 ~Y~~~gd~~eA~~~y~~aLeld-P~n-~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld--P~-d~~~l~~lA~ll~~~~ 202 (223)
+|...++|++|+.+|+++++.. |.. ..++.++|.++. .+|++++|+.+|++++... |. .+.+++.+|.++.. +
T Consensus 144 l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~-~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~-l 221 (282)
T 4f3v_A 144 VYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA-NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRS-Q 221 (282)
T ss_dssp HHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH-H
T ss_pred HHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH-HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH-c
Confidence 4566789999999998877653 221 357899996655 6999999999999999654 55 66789999977777 9
Q ss_pred CCHHHHHHHHHHHHHhCCC
Q 027439 203 KDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 203 G~~eeAi~~fekAL~l~Pd 221 (223)
|+.++|+..|++++..+|+
T Consensus 222 Gr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 222 GNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp TCHHHHHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHHHHhcCCc
Confidence 9999999999999999986
No 190
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.41 E-value=2.6e-07 Score=81.02 Aligned_cols=87 Identities=10% Similarity=-0.059 Sum_probs=59.6
Q ss_pred cCCCChHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHH
Q 027439 130 PNNHGNNSTDLYYQKMIQAD------PRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPN-------DGNVLSMYGD 196 (223)
Q Consensus 130 ~~~gd~~eA~~~y~~aLeld------P~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~-------d~~~l~~lA~ 196 (223)
...+++++|+.+|++++++. +..+.++.++|.+++ ..+++++|+.++++|+++.+. ...++..+|.
T Consensus 112 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~ 190 (378)
T 3q15_A 112 FDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYY-HMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAG 190 (378)
T ss_dssp HHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence 34567888888888887653 224567777775555 477888888888888776442 1345667776
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh
Q 027439 197 LIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 197 ll~~~~G~~eeAi~~fekAL~l 218 (223)
++.. .|++++|+.+|++|+++
T Consensus 191 ~y~~-~~~~~~A~~~~~~al~~ 211 (378)
T 3q15_A 191 NYDD-FKHYDKALPHLEAALEL 211 (378)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHH-hCCHHHHHHHHHHHHHH
Confidence 6666 78888888888887765
No 191
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.40 E-value=5e-07 Score=83.18 Aligned_cols=86 Identities=15% Similarity=-0.003 Sum_probs=71.0
Q ss_pred CCCChHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCHHH---HHHH
Q 027439 131 NNHGNNSTDLYYQKMIQA-----DPRNP---LLLSNYARFLKEARGDLLKAEEYCARAILM-----SPNDGNV---LSMY 194 (223)
Q Consensus 131 ~~gd~~eA~~~y~~aLel-----dP~n~---~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l-----dP~d~~~---l~~l 194 (223)
..++|++|++.|++++++ .|+++ .++.++|.++. .+|+|++|+.+|++++++ .|+++.+ +.++
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~-~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nL 377 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACI-NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 377 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHH
Confidence 457999999999999975 45554 56888996666 589999999999999976 3666654 6778
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 195 GDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 195 A~ll~~~~G~~eeAi~~fekAL~l 218 (223)
|.+++. +|++++|+.+|++|+++
T Consensus 378 a~~~~~-~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 378 GKLQLH-QGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHh-cCCHHHHHHHHHHHHHH
Confidence 877777 99999999999999976
No 192
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.39 E-value=7.9e-07 Score=80.36 Aligned_cols=89 Identities=8% Similarity=0.063 Sum_probs=80.3
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHH------
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARG-DLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDAS------ 206 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~g-dyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~e------ 206 (223)
+++++++++++++..+|++..+|+.++.++....+ +++++++++.++++.+|+|..+|...++++.. .+.++
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~-l~~~~~~~~~~ 182 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSH-FSTLGRISEAQ 182 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHH-HHHTTCCCHHH
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccccccchhh
Confidence 68999999999999999999999999977764327 89999999999999999999999999988766 66666
Q ss_pred --HHHHHHHHHHHhCCCCC
Q 027439 207 --RAESYFDQAVKAAPDDW 223 (223)
Q Consensus 207 --eAi~~fekAL~l~Pdn~ 223 (223)
+++++++++++.+|.|+
T Consensus 183 ~~eELe~~~k~I~~dp~N~ 201 (349)
T 3q7a_A 183 WGSELDWCNEMLRVDGRNN 201 (349)
T ss_dssp HHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCCCCH
Confidence 99999999999999874
No 193
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.38 E-value=9.6e-07 Score=76.44 Aligned_cols=92 Identities=17% Similarity=0.016 Sum_probs=76.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC-----HHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQAD--------PRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND-----GNVLS 192 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeld--------P~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d-----~~~l~ 192 (223)
|.+|...|++++|+.+|++++++. |....++.++|.+++ ..|++++|+.++++++.+.+.. ..++.
T Consensus 100 a~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 178 (373)
T 1hz4_A 100 SEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLW-AWARLDEAEASARSGIEVLSSYQPQQQLQCLA 178 (373)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhhccCcHHHHHHHH
Confidence 345566789999999999999875 345667888997666 5899999999999999998753 45678
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 027439 193 MYGDLIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 193 ~lA~ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
.++.++.. .|++++|+.++++++.+.
T Consensus 179 ~la~~~~~-~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 179 MLIQCSLA-RGDLDNARSQLNRLENLL 204 (373)
T ss_dssp HHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 88888777 999999999999998773
No 194
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.36 E-value=1.3e-06 Score=64.27 Aligned_cols=59 Identities=15% Similarity=0.207 Sum_probs=52.0
Q ss_pred HHHHHhCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 162 FLKEARGDLLKAEEYCARAILMS-------PNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 162 ~l~~~~gdyeeA~~~~ekAL~ld-------P~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.++ .+++|..|+..|++|+... +..+.++..+|.++++ +|++++|+.+++++++++|++
T Consensus 14 ~~~-~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l~P~~ 79 (104)
T 2v5f_A 14 VAY-TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLELDPEH 79 (104)
T ss_dssp HHH-HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC
T ss_pred HHH-HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCC
Confidence 445 4799999999999999863 3568899999988888 999999999999999999986
No 195
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.35 E-value=4.8e-07 Score=78.39 Aligned_cols=93 Identities=16% Similarity=0.115 Sum_probs=70.3
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--------CCCHHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRN------PLLLSNYARFLKEARGDLLKAEEYCARAILMS--------PNDGNVLS 192 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld--------P~d~~~l~ 192 (223)
..|...|++++|+.+|++++++.|.. ..++.++|.++. ..|++++|+.+|++++.+. |....++.
T Consensus 61 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 139 (373)
T 1hz4_A 61 EVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILF-AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVR 139 (373)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHH
Confidence 34455678999999999998875543 233677885555 5899999999999998875 33455677
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 193 MYGDLIWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 193 ~lA~ll~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
.+|.+++. .|++++|+.+|++++...+.
T Consensus 140 ~la~~~~~-~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 140 IRAQLLWA-WARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHH-hcCHHHHHHHHHHHHHHhhc
Confidence 78877777 89999999999999887664
No 196
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.24 E-value=3.3e-06 Score=61.74 Aligned_cols=56 Identities=14% Similarity=0.012 Sum_probs=50.7
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNV 190 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~ 190 (223)
..++|..+++++++++|+++.++..+|..++ ..++|++|+.+|+++++.+|.+++.
T Consensus 24 ~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~-~~g~y~~Ai~~w~~~l~~~p~~~~~ 79 (93)
T 3bee_A 24 MTDEVSLLLEQALQLEPYNEAALSLIANDHF-ISFRFQEAIDTWVLLLDSNDPNLDR 79 (93)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTCCCTTCCH
T ss_pred CCHHHHHHHHHHHHHCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCccH
Confidence 4699999999999999999999999997666 5899999999999999999985543
No 197
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.19 E-value=2.8e-06 Score=77.52 Aligned_cols=89 Identities=12% Similarity=0.099 Sum_probs=67.2
Q ss_pred ccccCCC---ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 027439 127 SWDPNNH---GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEAR----GDLLKAEEYCARAILMSPNDGNVLSMYGDLIW 199 (223)
Q Consensus 127 ~~Y~~~g---d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~----gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~ 199 (223)
.+|...+ ++++|+.+|+++.+.+|.++..+.++|.++. .. +++++|+.+|+++. |+++.+++.+|.+++
T Consensus 184 ~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~-~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~ 259 (452)
T 3e4b_A 184 TVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLG-DATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLY 259 (452)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHT-CGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHH
T ss_pred HHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHH
Confidence 3444456 7888888888888888888888888885443 22 58888888888887 788888888887644
Q ss_pred --HHcCCHHHHHHHHHHHHHhC
Q 027439 200 --QSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 200 --~~~G~~eeAi~~fekAL~l~ 219 (223)
...+++++|+.+|+++.+.+
T Consensus 260 ~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 260 DFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HSGGGCCHHHHHHHHHHHHHTT
T ss_pred hCCCCCCHHHHHHHHHHHHHCC
Confidence 33788888888888887653
No 198
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.16 E-value=8.8e-06 Score=73.93 Aligned_cols=82 Identities=15% Similarity=0.149 Sum_probs=56.7
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEA----RGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQ---SHKDAS 206 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~----~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~---~~G~~e 206 (223)
++++|+.+|+++++. +++.++.++|.++. . .+++++|+.+|++|++. +++.++..+|.++.. ..++++
T Consensus 346 ~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~-~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~ 420 (490)
T 2xm6_A 346 EHKKAVEWFRKAAAK--GEKAAQFNLGNALL-QGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYV 420 (490)
T ss_dssp HHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred cHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHH
Confidence 667777777777766 56777777774444 4 46778888888887775 357777777755443 157788
Q ss_pred HHHHHHHHHHHhCC
Q 027439 207 RAESYFDQAVKAAP 220 (223)
Q Consensus 207 eAi~~fekAL~l~P 220 (223)
+|+.+|++|++.+|
T Consensus 421 ~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 421 QAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCC
Confidence 88888888877763
No 199
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.07 E-value=5.5e-06 Score=77.66 Aligned_cols=92 Identities=9% Similarity=0.037 Sum_probs=72.5
Q ss_pred ccccccCCCChHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCHHHH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQA-----DPRN---PLLLSNYARFLKEARGDLLKAEEYCARAILM-----SPNDGNVL 191 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLel-----dP~n---~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l-----dP~d~~~l 191 (223)
-+.+|...|+|++|+.+|++++++ .|++ +..++++|.++. .+|+|++|+.+|++|+++ .|+++.+.
T Consensus 357 La~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~-~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 435 (490)
T 3n71_A 357 ASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNW-HAGHIEVGHGMICKAYAILLVTHGPSHPITK 435 (490)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTSHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHhCCCChHHH
Confidence 345666779999999999999975 4555 566899996655 689999999999999985 58888775
Q ss_pred HH---HHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 192 SM---YGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 192 ~~---lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
.. ++.+... ++.+++|+..|+++.+.
T Consensus 436 ~~~~~l~~~~~e-~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 436 DLEAMRMQTEME-LRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 54 4433444 88899999999998764
No 200
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.06 E-value=2.2e-05 Score=61.28 Aligned_cols=87 Identities=13% Similarity=0.074 Sum_probs=73.4
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHcCCHHHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARG---DLLKAEEYCARAILMS-P-NDGNVLSMYGDLIWQSHKDASRA 208 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~g---dyeeA~~~~ekAL~ld-P-~d~~~l~~lA~ll~~~~G~~eeA 208 (223)
....++..|++.+..++.+..+.++||+++- +.. +..+++.+++..+..+ | ..-+.++.+|..+++ .|+|++|
T Consensus 16 ~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv-~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk-lg~Y~~A 93 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLV-RTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHT-TSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHHHHhccCCCcHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-hhhHHHH
Confidence 4567888899999989999999999996665 344 3456999999999987 5 466888999987888 9999999
Q ss_pred HHHHHHHHHhCCCC
Q 027439 209 ESYFDQAVKAAPDD 222 (223)
Q Consensus 209 i~~fekAL~l~Pdn 222 (223)
+.+++.+|+.+|+|
T Consensus 94 ~~~~~~lL~~eP~n 107 (126)
T 1nzn_A 94 LKYVRGLLQTEPQN 107 (126)
T ss_dssp HHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999999987
No 201
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.03 E-value=9.4e-06 Score=74.00 Aligned_cols=77 Identities=22% Similarity=0.338 Sum_probs=47.4
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC-----CH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLK--EARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK-----DA 205 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~--~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G-----~~ 205 (223)
+++++|+.+|+++. |+++.++.++|.+++ ...+++++|+.+|++|++. +++.+++.+|.++. .| ++
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~--~G~g~~~d~ 303 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY--EGKWVPADA 303 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH--HCSSSCCCH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH--cCCCCCCCH
Confidence 46677777777765 666666667775433 2356666666666666653 35666666664433 34 66
Q ss_pred HHHHHHHHHHH
Q 027439 206 SRAESYFDQAV 216 (223)
Q Consensus 206 eeAi~~fekAL 216 (223)
++|+.+|++|.
T Consensus 304 ~~A~~~~~~Aa 314 (452)
T 3e4b_A 304 KAAEAHFEKAV 314 (452)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 66666666665
No 202
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.02 E-value=3.5e-05 Score=59.09 Aligned_cols=79 Identities=20% Similarity=0.237 Sum_probs=65.7
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---HcCCHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQ---SHKDASRAE 209 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~---~~G~~eeAi 209 (223)
+|+++|+.+|+++.+.....+. +|.++. ....+++|+++|++|.+. .++.+++.+|.++.. ..+++++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~----lg~~y~-~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC----LSLVSN-SQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH----HHHHTC-TTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhh----HHHHHH-cCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 5899999999999999865555 884444 467899999999999997 789999999965543 168999999
Q ss_pred HHHHHHHHh
Q 027439 210 SYFDQAVKA 218 (223)
Q Consensus 210 ~~fekAL~l 218 (223)
.+|++|.+.
T Consensus 82 ~~~~~Aa~~ 90 (138)
T 1klx_A 82 QYYSKACGL 90 (138)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999875
No 203
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.97 E-value=5e-05 Score=68.92 Aligned_cols=82 Identities=10% Similarity=0.057 Sum_probs=55.0
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---cCC
Q 027439 132 NHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEA----RGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQS---HKD 204 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~----~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~---~G~ 204 (223)
.+++++|+.+|+++++. +++.++..+|.++. . .+++++|+++|++|++. +++.++..+|.++..- .++
T Consensus 56 ~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~-~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~ 130 (490)
T 2xm6_A 56 TKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYM-NGEGVPQDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVD 130 (490)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCC
T ss_pred CcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCC
Confidence 35777777777777765 56777777774433 4 56777777777777764 4677777777544331 457
Q ss_pred HHHHHHHHHHHHHh
Q 027439 205 ASRAESYFDQAVKA 218 (223)
Q Consensus 205 ~eeAi~~fekAL~l 218 (223)
+++|+.+|+++.+.
T Consensus 131 ~~~A~~~~~~a~~~ 144 (490)
T 2xm6_A 131 KAESVKWFRLAAEQ 144 (490)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC
Confidence 77777777777654
No 204
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.92 E-value=3.2e-06 Score=74.28 Aligned_cols=87 Identities=10% Similarity=-0.103 Sum_probs=72.4
Q ss_pred ccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHcCCHH
Q 027439 129 DPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND--GNVLSMYGDLIWQSHKDAS 206 (223)
Q Consensus 129 Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d--~~~l~~lA~ll~~~~G~~e 206 (223)
+...++|++|.++|+.++..+|++. +.+.+|..++ ..+++++|+.+|++++...++. ..+++.+|.++.. +|+++
T Consensus 112 L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~-~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~-LG~~~ 188 (282)
T 4f3v_A 112 EAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYG-AAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN-LALFT 188 (282)
T ss_dssp HHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHH-HTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH-TTCHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHH-HcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH-CCCHH
Confidence 4456899999999999999999998 8889995555 6899999999999888753221 3478899977666 99999
Q ss_pred HHHHHHHHHHHh
Q 027439 207 RAESYFDQAVKA 218 (223)
Q Consensus 207 eAi~~fekAL~l 218 (223)
+|+.+|++++..
T Consensus 189 eAl~~l~~a~~g 200 (282)
T 4f3v_A 189 EAERRLTEANDS 200 (282)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHhcC
Confidence 999999999843
No 205
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.82 E-value=3.2e-05 Score=68.82 Aligned_cols=82 Identities=20% Similarity=0.143 Sum_probs=68.7
Q ss_pred ChHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh----------CCCCHHHHHHHHHHHHHH
Q 027439 134 GNNSTDLYYQKMIQADPR--NPLLLSNYARFLKEARGDLLKAEEYCARAILM----------SPNDGNVLSMYGDLIWQS 201 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~--n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l----------dP~d~~~l~~lA~ll~~~ 201 (223)
++.+|..+|+++.+..|+ ....+.+ ++..+|++++|+..++++++. +|+|+.++.++..+.+.
T Consensus 193 ~~q~A~~~f~El~~~~p~~~~~~lLln----~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~- 267 (310)
T 3mv2_B 193 TATSNFYYYEELSQTFPTWKTQLGLLN----LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALM- 267 (310)
T ss_dssp TTTHHHHHHHHHHTTSCSHHHHHHHHH----HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHhCCCcccHHHHHH----HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHH-
Confidence 789999999999888887 3444444 344689999999999988876 59999999999877777
Q ss_pred cCCHHHHHHHHHHHHHhCCCC
Q 027439 202 HKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 202 ~G~~eeAi~~fekAL~l~Pdn 222 (223)
.|+ +|.++++++.+.+|++
T Consensus 268 lgk--~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 268 QGL--DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp TTC--TTHHHHHHHHHTTCCC
T ss_pred hCh--HHHHHHHHHHHhCCCC
Confidence 887 8999999999999986
No 206
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=4.4e-05 Score=66.81 Aligned_cols=89 Identities=10% Similarity=0.053 Sum_probs=72.2
Q ss_pred ccCCCChHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHHH
Q 027439 129 DPNNHGNNSTDLYYQKMIQADP------RNPLLLSNYARFLKEARGDLLKAEEYCARAILM------SPNDGNVLSMYGD 196 (223)
Q Consensus 129 Y~~~gd~~eA~~~y~~aLeldP------~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l------dP~d~~~l~~lA~ 196 (223)
+...+++++|+.+|++++...+ ....++.++|.++. ..|+|++|..++++++.. .+....++...+.
T Consensus 105 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (434)
T 4b4t_Q 105 EQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHY-QKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESK 183 (434)
T ss_dssp CSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH-HccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence 3445689999999999987632 33678899997666 589999999999999876 3444678888888
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhC
Q 027439 197 LIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 197 ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
++.. .+++++|..+|++++...
T Consensus 184 ~~~~-~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 184 VYHK-LRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHH-hCcHHHHHHHHHHHHHHh
Confidence 8887 999999999999998764
No 207
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.78 E-value=5e-05 Score=61.03 Aligned_cols=61 Identities=8% Similarity=0.006 Sum_probs=54.7
Q ss_pred ChHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027439 134 GNNSTDLYYQKMIQAD-P-RNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYG 195 (223)
Q Consensus 134 d~~eA~~~y~~aLeld-P-~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA 195 (223)
++++++.++++.++.+ | .+.++++++|..++ +.++|++|.++++++++++|+|..+....-
T Consensus 50 ~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~-kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 50 DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccchHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 7789999999999999 7 67899999996666 699999999999999999999998876655
No 208
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.77 E-value=0.00013 Score=71.07 Aligned_cols=81 Identities=11% Similarity=0.043 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 027439 136 NSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAE-EYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQ 214 (223)
Q Consensus 136 ~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~-~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fek 214 (223)
+.....|++++...|.++.+|..+|.++. ..++.++|. ..|++|+...|.+..++..++.+... .+++++|...|++
T Consensus 326 ~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~-~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~-~~~~e~aR~iyek 403 (679)
T 4e6h_A 326 ARMTYVYMQAAQHVCFAPEIWFNMANYQG-EKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYEL-NTKIPEIETTILS 403 (679)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCCHHHHHHHHHH
Confidence 45678899999999999999999997776 478889997 99999999999999999999987776 9999999999999
Q ss_pred HHHh
Q 027439 215 AVKA 218 (223)
Q Consensus 215 AL~l 218 (223)
++..
T Consensus 404 ~l~~ 407 (679)
T 4e6h_A 404 CIDR 407 (679)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
No 209
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.76 E-value=4.2e-05 Score=68.04 Aligned_cols=95 Identities=9% Similarity=0.026 Sum_probs=69.0
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC----CHHHHHHH--HH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADP--RNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPN----DGNVLSMY--GD 196 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP--~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~----d~~~l~~l--A~ 196 (223)
.|..|...+++++|+..+++.+..+| ++..++..++.++. .+++.++|.+.++++...+|+ +..++..+ ++
T Consensus 106 la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L-~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~ 184 (310)
T 3mv2_B 106 LATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL-LNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESY 184 (310)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHH
Confidence 34556667889999999999888887 77888777775555 588999999999998888883 22233333 44
Q ss_pred HHHHHcC--CHHHHHHHHHHHHHhCCC
Q 027439 197 LIWQSHK--DASRAESYFDQAVKAAPD 221 (223)
Q Consensus 197 ll~~~~G--~~eeAi~~fekAL~l~Pd 221 (223)
+.+. .| ++++|+.+|+++.+..|+
T Consensus 185 v~l~-~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 185 IKFA-TNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHH-HTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHH-hCCccHHHHHHHHHHHHHhCCC
Confidence 4444 45 888999999988776664
No 210
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.61 E-value=0.0004 Score=61.50 Aligned_cols=73 Identities=14% Similarity=0.046 Sum_probs=57.6
Q ss_pred CCCCHHHHHHHHHHHHHH--h--C------CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHc-----CCHHHHHHH
Q 027439 149 DPRNPLLLSNYARFLKEA--R--G------DLLKAEEYCARAILMSPN--DGNVLSMYGDLIWQSH-----KDASRAESY 211 (223)
Q Consensus 149 dP~n~~~l~nlA~~l~~~--~--g------dyeeA~~~~ekAL~ldP~--d~~~l~~lA~ll~~~~-----G~~eeAi~~ 211 (223)
+|+++.+++..|..+... . + ...+|...++||+++||+ ++.+|..+|.++.. . |+.++|.++
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~-vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAA-APESFGGGMEKAHTA 226 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHH-SCTTTTCCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHh-CCCccCCCHHHHHHH
Confidence 456677777777544321 1 2 258899999999999999 78899999966555 4 999999999
Q ss_pred HHHHHHhCCCC
Q 027439 212 FDQAVKAAPDD 222 (223)
Q Consensus 212 fekAL~l~Pdn 222 (223)
|+||++++|+.
T Consensus 227 ferAL~LnP~~ 237 (301)
T 3u64_A 227 FEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHCCTT
T ss_pred HHHHHHhCCCC
Confidence 99999999974
No 211
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.53 E-value=0.00031 Score=68.29 Aligned_cols=88 Identities=6% Similarity=-0.035 Sum_probs=69.9
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHcCCHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPN---DGNVLSMYGDLIWQSHKDASRAE 209 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~---d~~~l~~lA~ll~~~~G~~eeAi 209 (223)
++++.|.++|+++++..|+++.+|..++.+.. ..++.+.|..+|++|+...|+ ...+|..+..+-.. .|+.+.+.
T Consensus 484 ~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~-~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~-~G~~~~~~ 561 (679)
T 4e6h_A 484 KDTKTACKVLELGLKYFATDGEYINKYLDFLI-YVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESK-VGSLNSVR 561 (679)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHH-TCCSHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-hCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-cCCHHHHH
Confidence 45788888888888888888888888887665 468888888888888888773 45666666655555 88888888
Q ss_pred HHHHHHHHhCCCC
Q 027439 210 SYFDQAVKAAPDD 222 (223)
Q Consensus 210 ~~fekAL~l~Pdn 222 (223)
..++++++..|++
T Consensus 562 ~v~~R~~~~~P~~ 574 (679)
T 4e6h_A 562 TLEKRFFEKFPEV 574 (679)
T ss_dssp HHHHHHHHHSTTC
T ss_pred HHHHHHHHhCCCC
Confidence 8888888888874
No 212
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.00013 Score=63.83 Aligned_cols=91 Identities=14% Similarity=0.095 Sum_probs=70.5
Q ss_pred cccccCCCChHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC---CC----HHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQA------DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSP---ND----GNVLS 192 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLel------dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP---~d----~~~l~ 192 (223)
|.+|...|+|++|..++++++.. .+....++...+.++. .+++|++|..++++++...+ +. ..++.
T Consensus 142 a~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 220 (434)
T 4b4t_Q 142 ATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYH-KLRNLAKSKASLTAARTAANSIYCPTQTVAELDL 220 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHH
Confidence 45667779999999999999876 3444678899997776 58999999999999988743 33 23445
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 193 MYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 193 ~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
.++.++.. .+++++|..+|.+++..
T Consensus 221 ~~g~~~~~-~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 221 MSGILHCE-DKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHTTS-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHHHH
Confidence 55544444 89999999999999865
No 213
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.40 E-value=0.00037 Score=72.93 Aligned_cols=78 Identities=14% Similarity=0.092 Sum_probs=63.6
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 027439 132 NHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESY 211 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~ 211 (223)
.+++++|.+++++ .+++.+|.++|.++. ..|++++|+..|.+| +|+..+...+.++.. .|++++|+++
T Consensus 1089 i~nldrAiE~Aer-----vn~p~vWsqLAKAql-~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~-lGkyEEAIey 1156 (1630)
T 1xi4_A 1089 IGNLDRAYEFAER-----CNEPAVWSQLAKAQL-QKGMVKEAIDSYIKA-----DDPSSYMEVVQAANT-SGNWEELVKY 1156 (1630)
T ss_pred HhhHHHHHHHHHh-----cCCHHHHHHHHHHHH-hCCCHHHHHHHHHhc-----CChHHHHHHHHHHHH-cCCHHHHHHH
Confidence 3455555555543 377999999997666 589999999999886 889999999988777 9999999999
Q ss_pred HHHHHHhCCC
Q 027439 212 FDQAVKAAPD 221 (223)
Q Consensus 212 fekAL~l~Pd 221 (223)
|++|.+..++
T Consensus 1157 L~mArk~~~e 1166 (1630)
T 1xi4_A 1157 LQMARKKARE 1166 (1630)
T ss_pred HHHHHhhccc
Confidence 9999987754
No 214
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.39 E-value=0.0017 Score=51.63 Aligned_cols=85 Identities=12% Similarity=-0.063 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHH
Q 027439 135 NNSTDLYYQKMIQADPRNPLLLSNYARFLKEARG---DLLKAEEYCARAILMSPN-DGNVLSMYGDLIWQSHKDASRAES 210 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~g---dyeeA~~~~ekAL~ldP~-d~~~l~~lA~ll~~~~G~~eeAi~ 210 (223)
....++.|++-+. +.-++.+.++||+++.. -. +..+++.+++..+..+|. .-+.++.+|..+++ .|+|++|+.
T Consensus 22 L~~lr~qY~~E~~-~~vs~~t~F~YAw~Lv~-S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk-l~~Y~~Ar~ 98 (144)
T 1y8m_A 22 LEILRQQVVSEGG-PTATIQSRFNYAWGLIK-STDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAKR 98 (144)
T ss_dssp HHHHHHHHHHTTS-TTSCHHHHHHHHHHHHH-SSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT-TTCHHHHHH
T ss_pred HHHHHHHHHHhcc-CCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH-hhhHHHHHH
Confidence 3444444444312 35678889999977663 33 457899999999999985 45778888877888 999999999
Q ss_pred HHHHHHHhCCCC
Q 027439 211 YFDQAVKAAPDD 222 (223)
Q Consensus 211 ~fekAL~l~Pdn 222 (223)
+.+.+|+.+|+|
T Consensus 99 y~d~lL~~eP~n 110 (144)
T 1y8m_A 99 YVDTLFEHERNN 110 (144)
T ss_dssp HHHHHHHTCCCC
T ss_pred HHHHHHhcCCCc
Confidence 999999999987
No 215
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.38 E-value=0.00018 Score=66.27 Aligned_cols=70 Identities=11% Similarity=0.013 Sum_probs=55.5
Q ss_pred ccccccCCCChHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCHHHH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQA-----DPRN---PLLLSNYARFLKEARGDLLKAEEYCARAILM-----SPNDGNVL 191 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLel-----dP~n---~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l-----dP~d~~~l 191 (223)
-+.+|..+|+|++|+.+|++++++ .|++ +..++|+|..+. .+|+|++|+.+|++|+++ .|+++.+.
T Consensus 346 La~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~-~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 346 AMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYM-GLENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 455666789999999999999975 3454 566899996655 699999999999999986 58888776
Q ss_pred HHHH
Q 027439 192 SMYG 195 (223)
Q Consensus 192 ~~lA 195 (223)
....
T Consensus 425 ~l~~ 428 (433)
T 3qww_A 425 EIKQ 428 (433)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 216
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.30 E-value=0.00043 Score=64.50 Aligned_cols=81 Identities=14% Similarity=0.119 Sum_probs=51.4
Q ss_pred cccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHH------------
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSM------------ 193 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~------------ 193 (223)
|..+...|.|++|..+|.++ ..|..+|.++. ++++|++|++.+++| +++.+|..
T Consensus 129 Gd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~-~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~ 194 (449)
T 1b89_A 129 GDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLV-HLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFR 194 (449)
T ss_dssp --------CTTTHHHHHHHT--------TCHHHHHHHHH-TTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHH-HhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHH
Confidence 34555667888888888766 34677776666 578888888888877 23433333
Q ss_pred ------------------HHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 194 ------------------YGDLIWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 194 ------------------lA~ll~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
+.. +|...|++++|+.+|++++.+++.
T Consensus 195 lA~~~~l~L~~~ad~l~~lv~-~Yek~G~~eEai~lLe~aL~le~a 239 (449)
T 1b89_A 195 LAQMCGLHIVVHADELEELIN-YYQDRGYFEELITMLEAALGLERA 239 (449)
T ss_dssp HHHHTTTTTTTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHTTSTTC
T ss_pred HHHHHHHHHHhCHhhHHHHHH-HHHHCCCHHHHHHHHHHHhCCcHH
Confidence 233 344489999999999999988764
No 217
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.26 E-value=0.0017 Score=52.37 Aligned_cols=83 Identities=17% Similarity=0.151 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHH
Q 027439 136 NSTDLYYQKMIQADPR--------NPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASR 207 (223)
Q Consensus 136 ~eA~~~y~~aLeldP~--------n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ee 207 (223)
++.+..|++|+..-|- .+.+|.+||.+ . ..+|.++|.+.|+.++.+....+.+|..+|.+-.. +|+..+
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~-ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiR-qgnl~k 112 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-K-AIQEPDDARDYFQMARANCKKFAFVHISFAQFELS-QGNVKK 112 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-H-HHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-H-HhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cccHHH
Confidence 7888999999987765 35778889843 4 46899999999999999988999999999988888 999999
Q ss_pred HHHHHHHHHHhCCC
Q 027439 208 AESYFDQAVKAAPD 221 (223)
Q Consensus 208 Ai~~fekAL~l~Pd 221 (223)
|...+.+|+.+.|.
T Consensus 113 ARkILg~AiG~~~k 126 (161)
T 4h7y_A 113 SKQLLQKAVERGAV 126 (161)
T ss_dssp HHHHHHHHHHTTCB
T ss_pred HHHHHHHHhccCCC
Confidence 99999999988774
No 218
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.26 E-value=0.00087 Score=52.73 Aligned_cols=85 Identities=12% Similarity=-0.058 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHcCCHHHHHH
Q 027439 135 NNSTDLYYQKMIQADPRNPLLLSNYARFLKEARG---DLLKAEEYCARAILMSPN-DGNVLSMYGDLIWQSHKDASRAES 210 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~g---dyeeA~~~~ekAL~ldP~-d~~~l~~lA~ll~~~~G~~eeAi~ 210 (223)
....++.|++-+ ...-.+.+.++||+++.. .. +..+++.+++..+..+|. .-+.++.+|..+++ .|+|++|+.
T Consensus 23 L~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~-S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yk-lgdY~~Ar~ 99 (134)
T 3o48_A 23 LEILRQQVVSEG-GPTATIQSRFNYAWGLIK-STDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAKR 99 (134)
T ss_dssp HHHHHHHHHHTT-GGGSCHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-HTCHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCChhhHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH-hhhHHHHHH
Confidence 344444454433 223357888999977663 33 457899999999999984 46778888877888 999999999
Q ss_pred HHHHHHHhCCCC
Q 027439 211 YFDQAVKAAPDD 222 (223)
Q Consensus 211 ~fekAL~l~Pdn 222 (223)
+.+.+|+..|+|
T Consensus 100 y~d~lL~~eP~N 111 (134)
T 3o48_A 100 YVDTLFEHERNN 111 (134)
T ss_dssp HHHHHHTTCTTC
T ss_pred HHHHHHhhCCCC
Confidence 999999999987
No 219
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.18 E-value=0.0006 Score=71.42 Aligned_cols=89 Identities=12% Similarity=0.087 Sum_probs=67.8
Q ss_pred CccccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC------------------
Q 027439 124 RWGSWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSP------------------ 185 (223)
Q Consensus 124 ~gg~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP------------------ 185 (223)
..|..++..++|++|..+|+++ ..|..+|.++. +++++++|++.+++|...++
T Consensus 1200 ~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLv-kLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~ 1270 (1630)
T 1xi4_A 1200 QVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLV-HLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQ 1270 (1630)
T ss_pred HHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHH-HhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHH
Confidence 4677888899999999999996 46788886666 58999999999999844332
Q ss_pred -------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 027439 186 -------NDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPDD 222 (223)
Q Consensus 186 -------~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pdn 222 (223)
.+++.+..++. +|...|.+++|+.+|++++.++|.+
T Consensus 1271 ~cgl~Iiv~~deLeeli~-yYe~~G~feEAI~LlE~aL~LeraH 1313 (1630)
T 1xi4_A 1271 MCGLHIVVHADELEELIN-YYQDRGYFEELITMLEAALGLERAH 1313 (1630)
T ss_pred HHHHhhhcCHHHHHHHHH-HHHHcCCHHHHHHHHHHHhccChhH
Confidence 13333444443 3455999999999999999988754
No 220
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.09 E-value=0.00044 Score=63.47 Aligned_cols=69 Identities=7% Similarity=-0.052 Sum_probs=54.6
Q ss_pred cccccCCCChHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQA-----DPRN---PLLLSNYARFLKEARGDLLKAEEYCARAILM-----SPNDGNVLS 192 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLel-----dP~n---~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l-----dP~d~~~l~ 192 (223)
+..|...|+|++|+.+|++++++ .|++ +..++++|..+. .+|++++|+.+|++|+++ .|+++.+..
T Consensus 336 ~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~-~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 414 (429)
T 3qwp_A 336 MDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQL-HQGMFPQAMKNLRLAFDIMRVTHGREHSLIED 414 (429)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 44556679999999999999975 3555 456889996555 699999999999999985 588887765
Q ss_pred HHH
Q 027439 193 MYG 195 (223)
Q Consensus 193 ~lA 195 (223)
.+.
T Consensus 415 ~~~ 417 (429)
T 3qwp_A 415 LIL 417 (429)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 221
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.04 E-value=0.00054 Score=62.39 Aligned_cols=63 Identities=11% Similarity=0.024 Sum_probs=52.4
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 027439 132 NHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDL 197 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~l 197 (223)
.+++++|+.+++++++++|+ ..++..+|.++. ..|++++|++.|++|+.++|..+ .+.....+
T Consensus 290 ~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~-~~G~~~eA~e~~~~AlrL~P~~~-t~~~~~~l 352 (372)
T 3ly7_A 290 KGKTDESYQAINTGIDLEMS-WLNYVLLGKVYE-MKGMNREAADAYLTAFNLRPGAN-TLYWIENG 352 (372)
T ss_dssp HTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCSHH-HHHHHHHS
T ss_pred CCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcC-hHHHHhCc
Confidence 58999999999999999975 778888895555 68999999999999999999765 44444444
No 222
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.80 E-value=0.0045 Score=50.37 Aligned_cols=83 Identities=16% Similarity=0.063 Sum_probs=64.1
Q ss_pred CCCChHHHHHHHHHHHHhCCCCH---------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC---CC------------
Q 027439 131 NNHGNNSTDLYYQKMIQADPRNP---------LLLSNYARFLKEARGDLLKAEEYCARAILMS---PN------------ 186 (223)
Q Consensus 131 ~~gd~~eA~~~y~~aLeldP~n~---------~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld---P~------------ 186 (223)
..+.|+.|+.+...++.+..+++ .++..+|..++. +++|.+|+.+|++||.+. ++
T Consensus 32 d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~s 110 (167)
T 3ffl_A 32 AAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSA 110 (167)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHCC--------------
T ss_pred HhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHhcCCCccccccccC
Confidence 35789999999999877654333 378889988885 899999999999987643 11
Q ss_pred ----------CHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 027439 187 ----------DGNVLSMYGDLIWQSHKDASRAESYFDQA 215 (223)
Q Consensus 187 ----------d~~~l~~lA~ll~~~~G~~eeAi~~fekA 215 (223)
+.++.+..|.++.. .+++++|+..++.+
T Consensus 111 s~p~s~~~~~e~Elkykia~C~~~-l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 111 STPQSQCLPSEIEVKYKLAECYTV-LKQDKDAIAILDGI 148 (167)
T ss_dssp ------CCCCHHHHHHHHHHHHHH-TTCHHHHHHHHHTS
T ss_pred CCcccccccchHHHHHHHHHHHHH-HCCHHHHHHHHhcC
Confidence 22678888876666 99999999998763
No 223
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.75 E-value=0.0028 Score=49.30 Aligned_cols=61 Identities=8% Similarity=0.006 Sum_probs=52.1
Q ss_pred ChHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027439 134 GNNSTDLYYQKMIQAD-P-RNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYG 195 (223)
Q Consensus 134 d~~eA~~~y~~aLeld-P-~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA 195 (223)
+..+++.+++..++.+ | .+-..++.+|..++ +.++|++|..+++.+++.+|+|..+.....
T Consensus 53 d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~y-klg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 53 DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 5567999999999987 5 56778888886666 699999999999999999999998876555
No 224
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.57 E-value=0.017 Score=53.53 Aligned_cols=87 Identities=8% Similarity=-0.030 Sum_probs=61.1
Q ss_pred ChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHh--C--C---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCH
Q 027439 134 GNNSTDLYYQKMIQADPR-NPLLLSNYARFLKEAR--G--D---LLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDA 205 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~-n~~~l~nlA~~l~~~~--g--d---yeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~ 205 (223)
.+..|...|+++....+. +...|..|..+-. .. + + ...+...|++++...|..+.+|..++..+.. .++.
T Consensus 152 ~y~~ar~~y~~~~~~~~~~s~~~W~~y~~~E~-~~~~~~~~~~~~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~-~~~~ 229 (493)
T 2uy1_A 152 IFQSSFQRYQQIQPLIRGWSVKNAARLIDLEM-ENGMKLGGRPHESRMHFIHNYILDSFYYAEEVYFFYSEYLIG-IGQK 229 (493)
T ss_dssp HHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHH-TCTTCCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH-TTCH
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHh-cCCccCcchhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-cCCH
Confidence 345566666666654333 4556766664322 11 0 0 3456778999999999999999999977766 8899
Q ss_pred HHHHHHHHHHHHhCCCCC
Q 027439 206 SRAESYFDQAVKAAPDDW 223 (223)
Q Consensus 206 eeAi~~fekAL~l~Pdn~ 223 (223)
++|...|++|+.. |.++
T Consensus 230 ~~ar~i~erAi~~-P~~~ 246 (493)
T 2uy1_A 230 EKAKKVVERGIEM-SDGM 246 (493)
T ss_dssp HHHHHHHHHHHHH-CCSS
T ss_pred HHHHHHHHHHHhC-CCcH
Confidence 9999999999988 8763
No 225
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.55 E-value=0.0075 Score=47.35 Aligned_cols=63 Identities=10% Similarity=-0.024 Sum_probs=53.7
Q ss_pred CChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPR-NPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGD 196 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~-n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ 196 (223)
.+..+++.+++..++.+|. .-+.++.+|..++ +.|+|++|.++++++++..|+|..+......
T Consensus 57 ~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~y-klgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 57 NDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 3677999999999999984 4677888886666 6899999999999999999999998876553
No 226
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.47 E-value=0.014 Score=54.08 Aligned_cols=82 Identities=12% Similarity=0.131 Sum_probs=61.3
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 027439 132 NHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESY 211 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~ 211 (223)
.++.+.|.+.|+++ +..+....+|...|.+-+...++++.|..+|+++++..|+++..+..++.+... .|+.++|...
T Consensus 299 ~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~-~~~~~~aR~l 376 (493)
T 2uy1_A 299 KRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLR-IGDEENARAL 376 (493)
T ss_dssp HHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred cCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHH
Confidence 35678888999988 443345667777775555434478999999999999888888887778876655 7888888888
Q ss_pred HHHH
Q 027439 212 FDQA 215 (223)
Q Consensus 212 fekA 215 (223)
|+++
T Consensus 377 ~er~ 380 (493)
T 2uy1_A 377 FKRL 380 (493)
T ss_dssp HHHS
T ss_pred HHHH
Confidence 7775
No 227
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.47 E-value=0.011 Score=46.95 Aligned_cols=62 Identities=10% Similarity=-0.009 Sum_probs=52.6
Q ss_pred CChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPR-NPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYG 195 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~-n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA 195 (223)
.+..+++.+++..++.+|. .-+.++.+|..++ ++++|++|.++++.+++.+|+|..+.....
T Consensus 56 ~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~y-kl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 56 NDERLGVKILTDIYKEAESRRRECLYYLTIGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp HHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccchhHHHHHHHHHHH-HhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3678899999999999985 4567778885566 699999999999999999999998876555
No 228
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.84 E-value=0.11 Score=46.69 Aligned_cols=83 Identities=8% Similarity=-0.073 Sum_probs=64.2
Q ss_pred CChHHHHHHHHHHHHhCCCCH----------------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNP----------------------LLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNV 190 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~----------------------~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~ 190 (223)
++.++|...+++|+.+.-... .+...++..+. ..|++++|+..+++++..+|-+-.+
T Consensus 129 ~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l-~~g~~~~a~~~l~~~~~~~P~~E~~ 207 (388)
T 2ff4_A 129 GRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEI-ACGRASAVIAELEALTFEHPYREPL 207 (388)
T ss_dssp TCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHH
Confidence 467778888888888753210 12233443333 5799999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027439 191 LSMYGDLIWQSHKDASRAESYFDQAVK 217 (223)
Q Consensus 191 l~~lA~ll~~~~G~~eeAi~~fekAL~ 217 (223)
+..+-.+++. .|+..+|+..|+++-+
T Consensus 208 ~~~lm~al~~-~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 208 WTQLITAYYL-SDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHT-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 9888888888 9999999999998754
No 229
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.71 E-value=0.18 Score=43.85 Aligned_cols=90 Identities=18% Similarity=0.160 Sum_probs=70.8
Q ss_pred CCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-------------
Q 027439 131 NNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDL------------- 197 (223)
Q Consensus 131 ~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~l------------- 197 (223)
+.++.++|++..+..++.+|.|+.....|-..|. ..|++++|...++.+.+++|........|-.+
T Consensus 9 ~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLc-v~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~~vfaG 87 (273)
T 1zbp_A 9 SEGQLQQALELLIEAIKASPKDASLRSSFIELLC-IDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARKDFAQG 87 (273)
T ss_dssp TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999988887777 48999999999999999999875443333222
Q ss_pred ---------------------HHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 198 ---------------------IWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 198 ---------------------l~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
.....|+.++|.+.-.+|++..|.
T Consensus 88 ~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~ 132 (273)
T 1zbp_A 88 AATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQE 132 (273)
T ss_dssp CCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcc
Confidence 111257888888888888877654
No 230
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.35 E-value=0.031 Score=52.49 Aligned_cols=66 Identities=20% Similarity=0.251 Sum_probs=50.2
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 027439 132 NHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLI 198 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll 198 (223)
...+..|..+|++|+.++|++...++.+| ++....++.-+|+.+|.|++......+.+..++..++
T Consensus 165 ~~~~~~A~~~Y~~A~~~~P~~G~~~nqLa-vla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 165 RNQTSQAESYYRHAAQLVPSNGQPYNQLA-ILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp TTCHHHHHHHHHHHHHHCTTBSHHHHHHH-HHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCchHHHHH-HHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 34567888888888888888888888888 5554567888888888888887766777777777543
No 231
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.28 E-value=0.15 Score=47.28 Aligned_cols=81 Identities=14% Similarity=-0.003 Sum_probs=35.6
Q ss_pred CChHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHH
Q 027439 133 HGNNSTDLYYQKMIQAD-PRNPLLLSNYARFLKEARGDLLKAEEYCARAILMS--PNDGNVLSMYGDLIWQSHKDASRAE 209 (223)
Q Consensus 133 gd~~eA~~~y~~aLeld-P~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld--P~d~~~l~~lA~ll~~~~G~~eeAi 209 (223)
+++++|..+|+++.+.. .-+..+|+.+-..+. +.|+.++|.++|++..+.. | |...+..+-..+.+ .|+.++|.
T Consensus 119 g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~~G~~P-d~~ty~~Li~~~~~-~g~~d~A~ 195 (501)
T 4g26_A 119 DDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFC-RKGDADKAYEVDAHMVESEVVP-EEPELAALLKVSMD-TKNADKVY 195 (501)
T ss_dssp TCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHH-TTCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCccceehHHHHHHH-HCCCHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhh-CCCHHHHH
Confidence 45555555555554431 112333333332232 3455555555555544432 2 33333334434444 55555555
Q ss_pred HHHHHHH
Q 027439 210 SYFDQAV 216 (223)
Q Consensus 210 ~~fekAL 216 (223)
.+|++.-
T Consensus 196 ~ll~~Mr 202 (501)
T 4g26_A 196 KTLQRLR 202 (501)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 232
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=95.25 E-value=0.0078 Score=55.97 Aligned_cols=85 Identities=6% Similarity=-0.046 Sum_probs=59.6
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEA--RGDLLKAEEYCARAILMSP-----NDGNVLSMYGDLIW 199 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~--~gdyeeA~~~~ekAL~ldP-----~d~~~l~~lA~ll~ 199 (223)
.+|+..|.+++|+.+|++++.+++.+..++..+| .++.+ .++..++++.|...+.+.| .+...|..+..++.
T Consensus 215 ~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~-il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~ 293 (449)
T 1b89_A 215 NYYQDRGYFEELITMLEAALGLERAHMGMFTELA-ILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYD 293 (449)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHH-HHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 4577778888888888888888888888888888 44422 1345555666666666666 67777777776666
Q ss_pred HHcCCHHHHHHHHH
Q 027439 200 QSHKDASRAESYFD 213 (223)
Q Consensus 200 ~~~G~~eeAi~~fe 213 (223)
. .++++.|+..+-
T Consensus 294 ~-~~e~d~A~~tm~ 306 (449)
T 1b89_A 294 K-YEEYDNAIITMM 306 (449)
T ss_dssp H-TTCHHHHHHHHH
T ss_pred h-hchHHHHHHHHH
Confidence 6 888888776543
No 233
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.19 E-value=0.044 Score=44.49 Aligned_cols=55 Identities=16% Similarity=0.187 Sum_probs=46.1
Q ss_pred HHHHHhCCHHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 162 FLKEARGDLLKAEEYCARAILMSPNDGN---------VLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 162 ~l~~~~gdyeeA~~~~ekAL~ldP~d~~---------~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
.++. .+.|+-|+.....++.+..++++ ++..+|+++|. .++|.+|..+|++||+.
T Consensus 29 ~L~d-~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 29 DMAA-AGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQ 92 (167)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHH-hhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHH
Confidence 5564 68999999999987776554444 78899999999 99999999999999875
No 234
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=94.86 E-value=0.063 Score=43.21 Aligned_cols=59 Identities=14% Similarity=0.215 Sum_probs=53.0
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLS 192 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~ 192 (223)
+|.++|...|+.++.+.-..+.+|..+|.|-. ++++..+|...+.+|+.+.|.....+-
T Consensus 74 ~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEi-Rqgnl~kARkILg~AiG~~~k~~~~le 132 (161)
T 4h7y_A 74 QEPDDARDYFQMARANCKKFAFVHISFAQFEL-SQGNVKKSKQLLQKAVERGAVPLEMLE 132 (161)
T ss_dssp HCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCBCHHHHH
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHhccCCCcHHHHH
Confidence 68899999999999998888999999997766 699999999999999999998776653
No 235
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.59 E-value=0.12 Score=51.03 Aligned_cols=58 Identities=14% Similarity=0.060 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 027439 156 LSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQA 215 (223)
Q Consensus 156 l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekA 215 (223)
+..=+.||.. +++|+-|+++.++|+..-|.+...|..+|.+|.. .++++.|+-.+.-.
T Consensus 340 L~~Qa~FLl~-K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~-l~d~e~ALLtLNSc 397 (754)
T 4gns_B 340 LNIQTNFLLN-RGDYELALGVSNTSTELALDSFESWYNLARCHIK-KEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-TTCHHHHHHHHHHS
T ss_pred HHHHHHHHhc-cCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHH-hccHHHHHHHHhcC
Confidence 3344556664 7999999999999999999999999999999888 99999999776543
No 236
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.11 E-value=0.17 Score=47.42 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 155 LLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 155 ~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
.+..+|.... ....+..|..+|.+|+.++|+++..+..+|.+... .++.-+|+.+|.|++..
T Consensus 154 ~l~~LGDL~R-Y~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~-~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 154 CLVHLGDIAR-YRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS-KGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH-TTCHHHHHHHHHHHHSS
T ss_pred HHHHcccHHH-HHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc-ccccHHHHHHHHHHHhc
Confidence 4567774444 46789999999999999999999999999976666 89999999999999854
No 237
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.05 E-value=0.75 Score=42.55 Aligned_cols=84 Identities=19% Similarity=0.077 Sum_probs=65.9
Q ss_pred CCChHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHcCCHHHH
Q 027439 132 NHGNNSTDLYYQKMIQAD-PRNPLLLSNYARFLKEARGDLLKAEEYCARAILM--SPNDGNVLSMYGDLIWQSHKDASRA 208 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeld-P~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l--dP~d~~~l~~lA~ll~~~~G~~eeA 208 (223)
.++.++|.++|+++.+.. .-|..+|+.+-..+. +.|++++|.+++++..+. .| |...+..+-..+.+ .|+.++|
T Consensus 83 ~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~-~g~~~~A 159 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAV-AKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCR-KGDADKA 159 (501)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHH-TTCHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHH-CCCHHHH
Confidence 457899999999998764 225667777775666 589999999999998875 35 56666666656677 9999999
Q ss_pred HHHHHHHHHh
Q 027439 209 ESYFDQAVKA 218 (223)
Q Consensus 209 i~~fekAL~l 218 (223)
...|++..+.
T Consensus 160 ~~l~~~M~~~ 169 (501)
T 4g26_A 160 YEVDAHMVES 169 (501)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999998765
No 238
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.85 E-value=0.15 Score=44.44 Aligned_cols=55 Identities=31% Similarity=0.414 Sum_probs=51.8
Q ss_pred HhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 166 ARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 166 ~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
+.++.++|++.++..|+.+|.|......+..++.. .|++++|.+.++-+.+++|+
T Consensus 9 ~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv-~G~w~RA~~QL~~~a~l~p~ 63 (273)
T 1zbp_A 9 SEGQLQQALELLIEAIKASPKDASLRSSFIELLCI-DGDFERADEQLMQSIKLFPE 63 (273)
T ss_dssp TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCGG
T ss_pred hCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHhCch
Confidence 36899999999999999999999999999998888 99999999999999999986
No 239
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.32 E-value=0.63 Score=43.69 Aligned_cols=65 Identities=15% Similarity=-0.008 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHH--------HhCCCCHHHHHHHHHH------------HHHHcCCHHHH
Q 027439 149 DPRNPLLLSNYARFLKEARGDLLKAEEYCARAI--------LMSPNDGNVLSMYGDL------------IWQSHKDASRA 208 (223)
Q Consensus 149 dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL--------~ldP~d~~~l~~lA~l------------l~~~~G~~eeA 208 (223)
..++...|.++|..+. ..++++.|+++|.++- .....+...+..++.+ ++.+.|++++|
T Consensus 677 ~~~~~~~W~~la~~al-~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a 755 (814)
T 3mkq_A 677 DESAEMKWRALGDASL-QRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGA 755 (814)
T ss_dssp TCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHH
T ss_pred hhCcHhHHHHHHHHHH-HcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHH
Confidence 4567889999996555 5899999999999852 1224455554455433 33336677777
Q ss_pred HHHHHH
Q 027439 209 ESYFDQ 214 (223)
Q Consensus 209 i~~fek 214 (223)
+++|.+
T Consensus 756 ~~~~~~ 761 (814)
T 3mkq_A 756 KDLLIK 761 (814)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666655
No 240
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=91.51 E-value=4 Score=33.82 Aligned_cols=57 Identities=18% Similarity=0.147 Sum_probs=43.9
Q ss_pred HHHHHhCCHHHHHHHHHHHHH-----------------hCCCCHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 027439 162 FLKEARGDLLKAEEYCARAIL-----------------MSPNDGNV-LSMYGDLIWQSHKDASRAESYFDQAVKAAP 220 (223)
Q Consensus 162 ~l~~~~gdyeeA~~~~ekAL~-----------------ldP~d~~~-l~~lA~ll~~~~G~~eeAi~~fekAL~l~P 220 (223)
+++ .+++|.+|+..++..++ .||.|.+. +..+|.++.+ .|+.++|+.+|.+.....|
T Consensus 71 Cy~-klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq-~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 71 CYK-KKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTL-SGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp HHH-HTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC
T ss_pred HHH-HHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHH-hcCHHHhhhHhhhhcCCcc
Confidence 344 58999999999999993 24556654 5567766666 9999999999999877654
No 241
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=91.22 E-value=0.84 Score=37.12 Aligned_cols=78 Identities=14% Similarity=0.060 Sum_probs=51.1
Q ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHH------
Q 027439 132 NHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMS--------PNDGNVLSMYGDL------ 197 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld--------P~d~~~l~~lA~l------ 197 (223)
.|+++.|.+..++. ++...|..+|.... .+++++-|+++|+++-..+ -.|.+-+..++.+
T Consensus 18 lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL-~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~ 91 (177)
T 3mkq_B 18 YGNLDAALDEAKKL-----NDSITWERLIQEAL-AQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTRED 91 (177)
T ss_dssp TTCHHHHHHHHHHH-----CCHHHHHHHHHHHH-HTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHh-----CCHHHHHHHHHHHH-HcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCcc
Confidence 46788888877654 67889999996665 5899999999988653321 1122222233222
Q ss_pred ------HHHHcCCHHHHHHHHHHH
Q 027439 198 ------IWQSHKDASRAESYFDQA 215 (223)
Q Consensus 198 ------l~~~~G~~eeAi~~fekA 215 (223)
++..+|+++++++.|.+.
T Consensus 92 ~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 92 FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 333378888888888663
No 242
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.07 E-value=0.56 Score=42.50 Aligned_cols=93 Identities=12% Similarity=0.042 Sum_probs=64.5
Q ss_pred ccccccCCCChHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--CCCHHH---HHHHHH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQADPRN---PLLLSNYARFLKEARGDLLKAEEYCARAILMS--PNDGNV---LSMYGD 196 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLeldP~n---~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld--P~d~~~---l~~lA~ 196 (223)
-|+.|...||+++|.++|.++....... ..++....+.... .+++..|..++.+|..+. ..++.. +..+..
T Consensus 137 la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~-~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~g 215 (429)
T 4b4t_R 137 LGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF-YNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYG 215 (429)
T ss_dssp HHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHH
Confidence 4566777899999999999998764332 4555555555554 699999999999996552 223332 233333
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh
Q 027439 197 LIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 197 ll~~~~G~~eeAi~~fekAL~l 218 (223)
+++...++|.+|..+|..++..
T Consensus 216 l~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 216 IHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHhChHHHHHHHHHHHhcc
Confidence 4444489999999999887654
No 243
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=89.39 E-value=1.8 Score=35.17 Aligned_cols=54 Identities=20% Similarity=0.159 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 027439 152 NPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQA 215 (223)
Q Consensus 152 n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekA 215 (223)
++...+.+| ...|+++.|.++++.+ ++...|..+|..... +|+++-|+..|+++
T Consensus 7 D~~~rF~LA----L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~-~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 7 DPHIRFDLA----LEYGNLDAALDEAKKL-----NDSITWERLIQEALA-QGNASLAEMIYQTQ 60 (177)
T ss_dssp CHHHHHHHH----HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHH-TTCHHHHHHHHHHT
T ss_pred ChHHHHHHH----HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHH-cCChHHHHHHHHHh
Confidence 456666666 3579999999998765 688999999999888 99999999999885
No 244
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=88.04 E-value=0.93 Score=41.18 Aligned_cols=91 Identities=14% Similarity=0.068 Sum_probs=61.9
Q ss_pred ccccCCCChHHHHHHHHHHHHhCCC---C---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC---CCCHHH---HHHH
Q 027439 127 SWDPNNHGNNSTDLYYQKMIQADPR---N---PLLLSNYARFLKEARGDLLKAEEYCARAILMS---PNDGNV---LSMY 194 (223)
Q Consensus 127 ~~Y~~~gd~~eA~~~y~~aLeldP~---n---~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld---P~d~~~---l~~l 194 (223)
.+|...++|.+|.+++.++++.-.. . ..++..-..++. ..+++.++..+|.+|.... +.+|.+ +...
T Consensus 107 ~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~-~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~ 185 (394)
T 3txn_A 107 ALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYH-ALSNLPKARAALTSARTTANAIYCPPKVQGALDLQ 185 (394)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHH
Confidence 4666778999999999998874211 2 233333343344 5799999999999996643 233432 3344
Q ss_pred HHHHHH-HcCCHHHHHHHHHHHHHh
Q 027439 195 GDLIWQ-SHKDASRAESYFDQAVKA 218 (223)
Q Consensus 195 A~ll~~-~~G~~eeAi~~fekAL~l 218 (223)
+.+++. ..++|.+|..+|-.++..
T Consensus 186 ~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 186 SGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred hhHHHHHhccCHHHHHHHHHHHHhc
Confidence 445665 599999999999988743
No 245
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=87.92 E-value=0.75 Score=41.11 Aligned_cols=66 Identities=8% Similarity=-0.012 Sum_probs=52.3
Q ss_pred cCCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-------hCCCCHHHHHHHHHH
Q 027439 130 PNNHGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAIL-------MSPNDGNVLSMYGDL 197 (223)
Q Consensus 130 ~~~gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~-------ldP~d~~~l~~lA~l 197 (223)
...+++.+|+..+++++..+|.+-.++..+-.+++ +.|+..+|++.|+++-. ++| .+.....+..+
T Consensus 182 l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~-~~Gr~~~Al~~y~~~r~~L~~eLG~~P-~~~l~~l~~~i 254 (388)
T 2ff4_A 182 IACGRASAVIAELEALTFEHPYREPLWTQLITAYY-LSDRQSDALGAYRRVKTTLADDLGIDP-GPTLRALNERI 254 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHSCCC-CHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHH
Confidence 34689999999999999999999999988887777 58999999999888754 345 45454444433
No 246
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=85.27 E-value=2 Score=40.14 Aligned_cols=53 Identities=11% Similarity=-0.065 Sum_probs=31.3
Q ss_pred ccccccCCCChHHHHHHHHHHHH--------hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 027439 125 WGSWDPNNHGNNSTDLYYQKMIQ--------ADPRNPLLLSNYARFLKEARGDLLKAEEYCA 178 (223)
Q Consensus 125 gg~~Y~~~gd~~eA~~~y~~aLe--------ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~e 178 (223)
.|+.+...++++.|+.+|.++-. ....+...+..++.... ..+++..|..+|.
T Consensus 687 la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~-~~~~~~~A~~~~~ 747 (814)
T 3mkq_A 687 LGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAE-TTGKFNLAFNAYW 747 (814)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHH-HcCchHHHHHHHH
Confidence 45566677899999999988521 22445555555553333 3555555555443
No 247
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=84.26 E-value=7.1 Score=40.04 Aligned_cols=86 Identities=7% Similarity=-0.135 Sum_probs=64.0
Q ss_pred cCCCChHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcC
Q 027439 130 PNNHGNNSTDLYYQKMIQA----DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMS--PNDGNVLSMYGDLIWQSHK 203 (223)
Q Consensus 130 ~~~gd~~eA~~~y~~aLel----dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld--P~d~~~l~~lA~ll~~~~G 203 (223)
.+.|+.++|..+|+++-+. -.-|..+|+.+-..+. +.|++++|.++|++..+.. | |...+..+-..+.+ .|
T Consensus 138 cK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glc-k~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI~glcK-~G 214 (1134)
T 3spa_A 138 LLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWA-RQGAFKELVYVLFMVKDAGLTP-DLLSYAAALQCMGR-QD 214 (1134)
T ss_dssp HHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHH-HT
T ss_pred HhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHH-hCCCHHHHHHHHHHHHHcCCCC-cHHHHHHHHHHHHh-CC
Confidence 3458999999999876543 2335777777776666 5899999999999998754 5 55566666656666 67
Q ss_pred C-HHHHHHHHHHHHHh
Q 027439 204 D-ASRAESYFDQAVKA 218 (223)
Q Consensus 204 ~-~eeAi~~fekAL~l 218 (223)
+ .++|..+|++....
T Consensus 215 ~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 215 QDAGTIERCLEQMSQE 230 (1134)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHc
Confidence 6 57899999998765
No 248
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=84.24 E-value=2.3 Score=41.89 Aligned_cols=88 Identities=14% Similarity=0.152 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHh--------CCCC----------HHHHHHHH
Q 027439 135 NNSTDLYYQKMIQADPRNPLLLSNYARFLKEAR-GDLLKAEEYCARAILM--------SPND----------GNVLSMYG 195 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~-gdyeeA~~~~ekAL~l--------dP~d----------~~~l~~lA 195 (223)
++.|+.++++..+.+|.+...+......+.... .+--+|+....++++. .+.+ ...+..-+
T Consensus 265 ~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa 344 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQT 344 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHH
Confidence 477999999999999987654422221121111 2446677777777642 2333 23555566
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCC
Q 027439 196 DLIWQSHKDASRAESYFDQAVKAAPDDW 223 (223)
Q Consensus 196 ~ll~~~~G~~eeAi~~fekAL~l~Pdn~ 223 (223)
.++.. .++++-|+..-++|+.+.|++|
T Consensus 345 ~FLl~-K~~~elAL~~Ak~AV~~aPseF 371 (754)
T 4gns_B 345 NFLLN-RGDYELALGVSNTSTELALDSF 371 (754)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHhc-cCcHHHHHHHHHHHHhcCchhh
Confidence 66676 8999999999999999999876
No 249
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=83.13 E-value=7.3 Score=35.36 Aligned_cols=91 Identities=7% Similarity=0.038 Sum_probs=60.8
Q ss_pred cccccCCCChHHHHHHHHHHHHh----CCCC--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---hCCCCHH----HHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQA----DPRN--PLLLSNYARFLKEARGDLLKAEEYCARAIL---MSPNDGN----VLS 192 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLel----dP~n--~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~---ldP~d~~----~l~ 192 (223)
+..|+..|++.+|...++..... .+.. ..++..-.+.+. ..+++.+|..++.++.. ..+.++. .+.
T Consensus 144 a~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l-~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~ 222 (445)
T 4b4t_P 144 VEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI-LKGDYSQATVLSRKILKKTFKNPKYESLKLEYYN 222 (445)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHH
Confidence 35566778999999999987643 1111 344555554555 47999999999998732 2344443 334
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 193 MYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 193 ~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
.++ .++...++|.+|-.+|..++..
T Consensus 223 ~~~-~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 223 LLV-KISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHH-HHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHhhhHHHHHHHHHHHHhc
Confidence 444 3444489999999999988753
No 250
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.30 E-value=2.3 Score=43.23 Aligned_cols=87 Identities=6% Similarity=-0.120 Sum_probs=58.9
Q ss_pred cccccCCCChHHHHHHHHHHHH---hC--------------------CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 126 GSWDPNNHGNNSTDLYYQKMIQ---AD--------------------PRNPLLLSNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 126 g~~Y~~~gd~~eA~~~y~~aLe---ld--------------------P~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
|++|...+++++|..+|+++-. .+ ...+.+|.... .++++.+.++.++++.+.||+
T Consensus 849 g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~-~LFe~~~~~~~vi~fa~lAi~ 927 (1139)
T 4fhn_B 849 ALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLS-KKLFEESAYIDALEFSLLADA 927 (1139)
T ss_dssp HHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHH-HHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHH-HHHHHcCCHHHHHHHHHHHHH
Confidence 4556667899999999988632 11 11234455555 466678999999999999998
Q ss_pred hCC-CCHH----HHHHHHHHHHHHcCCHHHHHHHHHH
Q 027439 183 MSP-NDGN----VLSMYGDLIWQSHKDASRAESYFDQ 214 (223)
Q Consensus 183 ldP-~d~~----~l~~lA~ll~~~~G~~eeAi~~fek 214 (223)
.-+ ++.. .|..+-..+.. .++|++|...+.+
T Consensus 928 ~~~~~~~~~~~~l~~~iFk~~L~-l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 928 SKETDDEDLSIAITHETLKTACA-AGKFDAAHVALMV 963 (1139)
T ss_dssp HCCSCCHHHHHHHHHHHHHHHHH-HCCSGGGGHHHHH
T ss_pred hccCCChhhHHHHHHHHHHHHHh-hCCHHHHHHHHHh
Confidence 764 4443 34444444555 8999999777644
No 251
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=75.73 E-value=3.7 Score=28.90 Aligned_cols=18 Identities=28% Similarity=0.410 Sum_probs=11.7
Q ss_pred HHhCCHHHHHHHHHHHHH
Q 027439 165 EARGDLLKAEEYCARAIL 182 (223)
Q Consensus 165 ~~~gdyeeA~~~~ekAL~ 182 (223)
+..|+|++|+.+|..+++
T Consensus 22 D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHH
Confidence 456777777666666665
No 252
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.54 E-value=4 Score=38.48 Aligned_cols=70 Identities=19% Similarity=0.206 Sum_probs=48.8
Q ss_pred CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 149 DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND-------GNVLSMYGDLIWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 149 dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d-------~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
|+.....+.|+-.-.|...+.|++|..+..++. .|.. ...++.+|.+... +++|.+|.+++.+|+...|.
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~-q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAI-QLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTSSCSC
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCc
Confidence 444333333433344446799999999999995 3432 3445566777666 99999999999999987664
No 253
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=73.98 E-value=4.2 Score=28.74 Aligned_cols=18 Identities=22% Similarity=0.230 Sum_probs=12.0
Q ss_pred HHhCCHHHHHHHHHHHHH
Q 027439 165 EARGDLLKAEEYCARAIL 182 (223)
Q Consensus 165 ~~~gdyeeA~~~~ekAL~ 182 (223)
+..|+|++|+.+|..+++
T Consensus 30 D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 30 DKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHH
Confidence 456777777776666665
No 254
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=70.59 E-value=28 Score=28.71 Aligned_cols=77 Identities=9% Similarity=0.067 Sum_probs=52.5
Q ss_pred HHHHHHHHh---------CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHH
Q 027439 140 LYYQKMIQA---------DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMS--PNDGNVLSMYGDLIWQSHKDASRA 208 (223)
Q Consensus 140 ~~y~~aLel---------dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld--P~d~~~l~~lA~ll~~~~G~~eeA 208 (223)
.+++++++. ||....+|..|+.++. .....++..+|.-..... -..+..+..+|.++-. .|++++|
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~~--~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A 134 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLFL--SNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLEN-AQFFLEA 134 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhhc--ccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHHH
Confidence 456666653 3444567777774331 344677888777776654 4566777777755555 9999999
Q ss_pred HHHHHHHHHhC
Q 027439 209 ESYFDQAVKAA 219 (223)
Q Consensus 209 i~~fekAL~l~ 219 (223)
...|+++++..
T Consensus 135 ~~Vy~~GI~~~ 145 (202)
T 3esl_A 135 KVLLELGAENN 145 (202)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999998764
No 255
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=70.38 E-value=28 Score=27.73 Aligned_cols=80 Identities=16% Similarity=0.051 Sum_probs=56.7
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYF 212 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~f 212 (223)
++....+.||-+ .+-++..+ ++|.-+...++.-++-.+.+...+..++-++..+..+|.++-+ .|+..+|.+.+
T Consensus 75 ~NlKrVi~C~~~---~n~~se~v--d~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~K-lg~~r~a~eLl 148 (172)
T 1wy6_A 75 QNLKSVVECGVI---NNTLNEHV--NKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRR-VGDERDATTLL 148 (172)
T ss_dssp SCTHHHHHHHHH---TTCCCHHH--HHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred hcHHHHHHHHHH---hcchHHHH--HHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHH-hcchhhHHHHH
Confidence 366778888843 44444433 4443344457888888888888766677789999999977666 99999999999
Q ss_pred HHHHHh
Q 027439 213 DQAVKA 218 (223)
Q Consensus 213 ekAL~l 218 (223)
.+|-+.
T Consensus 149 ~~AC~k 154 (172)
T 1wy6_A 149 IEACKK 154 (172)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 988653
No 256
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=69.29 E-value=27 Score=29.29 Aligned_cols=49 Identities=14% Similarity=0.015 Sum_probs=38.9
Q ss_pred ChHHHHHHHHHHHHh-----CCC---CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 134 GNNSTDLYYQKMIQA-----DPR---NPLLLSNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 134 d~~eA~~~y~~aLel-----dP~---n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
+.+.|..+|+.|+++ .|. ..-...|++.|+|+.+++.++|..+.++|+.
T Consensus 140 ~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 140 SLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp CHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 368889999998863 333 4456678888999989999999999999966
No 257
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=66.27 E-value=38 Score=28.95 Aligned_cols=48 Identities=10% Similarity=0.063 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHH----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 171 LKAEEYCARAIL----MSPNDGNV---LSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 171 eeA~~~~ekAL~----ldP~d~~~---l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
++|...|++|+. +.|.+|.- ..+++.++|...++.++|...-++|+..
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 227 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEM 227 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 567888888875 57778743 3456666888899999999988888753
No 258
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=66.04 E-value=14 Score=26.35 Aligned_cols=44 Identities=7% Similarity=0.070 Sum_probs=25.7
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPN 186 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~ 186 (223)
-.+.|+.+.++|++.|-. .++..+ ..-|.+|+++|.+++...|+
T Consensus 11 ~l~~Ai~lv~~Ave~D~~-----g~y~eA----l~~Y~~Aie~l~~alk~e~~ 54 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAE-----SRYQQA----LVCYQEGIDMLLQVLKGTKE 54 (93)
T ss_dssp HHHHHHHHHHHHHHHHHT-----TCHHHH----HHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHh-----CCHHHH----HHHHHHHHHHHHHHHHHCCC
Confidence 567889889888776332 111111 12345666667777766654
No 259
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=65.84 E-value=30 Score=32.93 Aligned_cols=80 Identities=14% Similarity=0.183 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 027439 135 NNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQ 214 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fek 214 (223)
..++...+.+...... +......++.... +.++++.|..++++.-..........+.+|.++.. .|+.++|..+|++
T Consensus 268 ~~~~~~~~~~~~~~~~-~~~~~e~~~r~Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~-~g~~~~a~~~~~~ 344 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQ-STSLIERRVRMAL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLE-RGREAEAKEILHQ 344 (618)
T ss_dssp CHHHHHHHHHHHHTCC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCC-ChHHHHHHHHHHH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4677777777665444 3434445554443 57999999999988766444567888888887766 9999999999999
Q ss_pred HHH
Q 027439 215 AVK 217 (223)
Q Consensus 215 AL~ 217 (223)
+..
T Consensus 345 ~a~ 347 (618)
T 1qsa_A 345 LMQ 347 (618)
T ss_dssp HHT
T ss_pred Hhc
Confidence 874
No 260
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=64.86 E-value=11 Score=26.59 Aligned_cols=19 Identities=11% Similarity=0.067 Sum_probs=16.5
Q ss_pred HHhCCHHHHHHHHHHHHHh
Q 027439 165 EARGDLLKAEEYCARAILM 183 (223)
Q Consensus 165 ~~~gdyeeA~~~~ekAL~l 183 (223)
...++|++|+.+|..+++.
T Consensus 27 D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHH
Confidence 5689999999999998874
No 261
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=64.57 E-value=18 Score=31.03 Aligned_cols=47 Identities=19% Similarity=0.250 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHH----hCCCCHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 136 NSTDLYYQKMIQ----ADPRNPL---LLSNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 136 ~eA~~~y~~aLe----ldP~n~~---~l~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
+.|..+|++|++ +.|.+|. +..|++.|+|+.+++.++|..+.++|+.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 578889999986 4677763 3557777889888999999998888775
No 262
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=64.51 E-value=27 Score=28.83 Aligned_cols=62 Identities=11% Similarity=-0.017 Sum_probs=46.2
Q ss_pred cccCCCChHHHHHHHHHHHH--h---------------CCCCHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHH
Q 027439 128 WDPNNHGNNSTDLYYQKMIQ--A---------------DPRNPLL-LSNYARFLKEARGDLLKAEEYCARAILMSPNDGN 189 (223)
Q Consensus 128 ~Y~~~gd~~eA~~~y~~aLe--l---------------dP~n~~~-l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~ 189 (223)
+|-...||..|+.+++..++ + ||.+..+ +..+|..+. ..++-++|+.++.+....+|-.+.
T Consensus 71 Cy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~llt-q~g~r~EaI~y~~~Sf~~~~lf~~ 149 (242)
T 3kae_A 71 CYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCT-LSGYREEGIGHYVRSFGKSFLFSP 149 (242)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHH-HhcCHHHhhhHhhhhcCCccccch
Confidence 34567899999999999993 2 3455544 556665555 589999999999999888876554
Q ss_pred H
Q 027439 190 V 190 (223)
Q Consensus 190 ~ 190 (223)
+
T Consensus 150 v 150 (242)
T 3kae_A 150 V 150 (242)
T ss_dssp H
T ss_pred H
Confidence 4
No 263
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=64.46 E-value=12 Score=26.14 Aligned_cols=45 Identities=18% Similarity=0.146 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH
Q 027439 135 NNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDG 188 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~ 188 (223)
.++|+.+.++|++.|-. .++..+ ..-|.+|+++|.+++...|+..
T Consensus 8 ~~~Ai~lv~~Ave~D~~-----g~y~eA----l~lY~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 8 EDMARKYAILAVKADKE-----GKVEDA----ITYYKKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHHHHT-----TCHHHH----HHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHHHh-----ccHHHH----HHHHHHHHHHHHHHHHHCCCHH
Confidence 36788888888877433 122222 2236678888899888776544
No 264
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=64.20 E-value=12 Score=26.22 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCH
Q 027439 135 NNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDG 188 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~ 188 (223)
.++|+.+.++|++.|-. .++..++ .-|.+|+++|.+++...|+..
T Consensus 16 ~~~Ai~lv~~Ave~D~~-----g~y~eAl----~lY~~aie~l~~alk~e~d~~ 60 (83)
T 2w2u_A 16 EEMARKYAINAVKADKE-----GNAEEAI----TNYKKAIEVLAQLVSLYRDGS 60 (83)
T ss_dssp HHHHHHHHHHHHHHHHT-----TCHHHHH----HHHHHHHHHHHHHHHHSTTSS
T ss_pred HHHHHHHHHHHHHHHHh-----ccHHHHH----HHHHHHHHHHHHHHHHCCCHH
Confidence 47788888888877543 1222222 235678888999888876543
No 265
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=63.64 E-value=45 Score=28.43 Aligned_cols=47 Identities=13% Similarity=0.040 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027439 171 LKAEEYCARAIL-----MSPNDGNV---LSMYGDLIWQSHKDASRAESYFDQAVK 217 (223)
Q Consensus 171 eeA~~~~ekAL~-----ldP~d~~~---l~~lA~ll~~~~G~~eeAi~~fekAL~ 217 (223)
++|...|++|+. +.|.+|.- ..+++.++|...++.++|...-++|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 567778888864 57888843 345566688878999999888877764
No 266
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=62.54 E-value=9.1 Score=27.42 Aligned_cols=27 Identities=19% Similarity=0.046 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHh
Q 027439 156 LSNYARFLKEARGDLLKAEEYCARAILM 183 (223)
Q Consensus 156 l~nlA~~l~~~~gdyeeA~~~~ekAL~l 183 (223)
+...| +-.+..++|++|+.+|..|++.
T Consensus 18 lv~~A-ve~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 18 VLKRA-VELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHH-HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHhCCHHHHHHHHHHHHHH
Confidence 35566 4556779999999999999885
No 267
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=61.80 E-value=44 Score=30.05 Aligned_cols=60 Identities=10% Similarity=0.024 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhC--CCCH----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 157 SNYARFLKEARGDLLKAEEYCARAILMS--PNDG----NVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 157 ~nlA~~l~~~~gdyeeA~~~~ekAL~ld--P~d~----~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
..+|..++. .++|.+|.+++.+.+.-- -++. +++..-..++.. .+++.++..+|.+|.+.
T Consensus 103 ~kL~~l~~~-~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~-~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 103 ARLIALYFD-TALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHA-LSNLPKARAALTSARTT 168 (394)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH-hccHHHHHHHHHHHHhh
Confidence 378877774 899999999998887742 2222 223333333555 99999999999999765
No 268
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=60.93 E-value=13 Score=33.27 Aligned_cols=64 Identities=13% Similarity=0.087 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 153 PLLLSNYARFLKEARGDLLKAEEYCARAILMSPND---GNVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 153 ~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d---~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
..++..+|.+++ ..|++++|.++|.++....... .+++.....+++. .+++..+..+++|+...
T Consensus 131 ~~~~~~la~~~~-~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~-~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 131 AQAWINLGEYYA-QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFF-YNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SSCCHHHHHHHH-HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 446788997777 5899999999999998764332 3455555556666 89999999999999765
No 269
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=60.53 E-value=11 Score=31.79 Aligned_cols=47 Identities=19% Similarity=0.239 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 136 NSTDLYYQKMIQ-----ADPRNPL---LLSNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 136 ~eA~~~y~~aLe-----ldP~n~~---~l~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
+.|..+|++|++ +.|.+|. +..|++.|+|+..++.++|..+.++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456777777764 4566653 3446666777767777777777666654
No 270
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=60.26 E-value=57 Score=27.87 Aligned_cols=47 Identities=11% Similarity=0.003 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027439 171 LKAEEYCARAIL-----MSPNDGNV---LSMYGDLIWQSHKDASRAESYFDQAVK 217 (223)
Q Consensus 171 eeA~~~~ekAL~-----ldP~d~~~---l~~lA~ll~~~~G~~eeAi~~fekAL~ 217 (223)
+.|...|++|.. +.|.+|-- ..+++.++|...++.++|...-++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567778888764 56888744 345555678878999999888777764
No 271
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=57.99 E-value=8.4 Score=36.29 Aligned_cols=56 Identities=21% Similarity=0.211 Sum_probs=41.3
Q ss_pred ccCCCChHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC
Q 027439 129 DPNNHGNNSTDLYYQKMIQADPRN-------PLLLSNYARFLKEARGDLLKAEEYCARAILMSPND 187 (223)
Q Consensus 129 Y~~~gd~~eA~~~y~~aLeldP~n-------~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d 187 (223)
|...+.|++|..+..++. .|.+ ..+++.+|++.. .+.+|.+|.+++..|+...|.+
T Consensus 241 YL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a-~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 241 FLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINA-IQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCcc
Confidence 344578899999998875 4432 344556675555 5899999999999999987754
No 272
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=56.88 E-value=13 Score=31.76 Aligned_cols=47 Identities=23% Similarity=0.254 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 136 NSTDLYYQKMIQ-----ADPRNPL---LLSNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 136 ~eA~~~y~~aLe-----ldP~n~~---~l~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
+.|..+|++|++ +.|.+|. +..|++.|+|+.+++.++|..+.++|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 578888998885 5777763 3557777889888999999888777764
No 273
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=55.66 E-value=36 Score=28.01 Aligned_cols=50 Identities=10% Similarity=0.149 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC
Q 027439 135 NNSTDLYYQKMIQ--ADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSP 185 (223)
Q Consensus 135 ~~eA~~~y~~aLe--ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP 185 (223)
..++...|..+.. +.-..+.+|..+|.++- ..+++.+|.+.|+++|..+.
T Consensus 95 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE-~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 95 FHESENTFKYMFNKGIGTKLSLFYEEFSKLLE-NAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp HHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCC
Confidence 4577788888775 45677899999995444 68999999999999999764
No 274
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=55.07 E-value=20 Score=25.25 Aligned_cols=44 Identities=9% Similarity=0.156 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC
Q 027439 135 NNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND 187 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d 187 (223)
-..|+.+..+|++.|-. .++.. ...-|.+|+++|..++...|+.
T Consensus 13 ~~~A~~lv~~Ave~D~~-----g~y~e----Al~lY~~Aie~ll~alk~e~d~ 56 (86)
T 4a5x_A 13 STAAATVLKRAVELDSE-----SRYPQ----ALVCYQEGIDLLLQVLKGTKDN 56 (86)
T ss_dssp HHHHHHHHHHHHHHHHT-----TCHHH----HHHHHHHHHHHHHHHHHTCCCH
T ss_pred HHHHHHHHHHHHHHHHc-----CCHHH----HHHHHHHHHHHHHHHHhhCCCH
Confidence 46789999999987433 22222 2234678999999999987753
No 275
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=54.96 E-value=15 Score=31.00 Aligned_cols=48 Identities=23% Similarity=0.283 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 135 NNSTDLYYQKMIQ-----ADPRNPL---LLSNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 135 ~~eA~~~y~~aLe-----ldP~n~~---~l~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
.+.|..+|++|++ +.|.+|. +..|++.|+|+..++.++|..+.++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3567778888764 5677763 3456676788777888888887666653
No 276
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=53.77 E-value=16 Score=31.02 Aligned_cols=47 Identities=23% Similarity=0.330 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 136 NSTDLYYQKMIQ-----ADPRNPL---LLSNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 136 ~eA~~~y~~aLe-----ldP~n~~---~l~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
+.|..+|++|++ +.|.+|. +..|++.|+|+..++.++|..+.++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567778888765 5677763 3456777788878888888887666654
No 277
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=53.01 E-value=45 Score=26.48 Aligned_cols=51 Identities=14% Similarity=0.111 Sum_probs=40.9
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMS 184 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld 184 (223)
+.-++-.+.++..+.-++-++.++..+|.+|. +.|+..+|.+++.+|.+..
T Consensus 105 ~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~-Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 105 GKRDKLEEIGREILKNNEVSASILVAIANALR-RVGDERDATTLLIEACKKG 155 (172)
T ss_dssp TCHHHHHHHHHHHC--CCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTT
T ss_pred ccHhHHHHHHHHHhccCCCChHHHHHHHHHHH-HhcchhhHHHHHHHHHHhh
Confidence 45677788888877777778999999997777 6999999999999998753
No 278
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=52.96 E-value=17 Score=31.18 Aligned_cols=47 Identities=19% Similarity=0.239 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 136 NSTDLYYQKMIQ-----ADPRNPL---LLSNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 136 ~eA~~~y~~aLe-----ldP~n~~---~l~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
+.|..+|++|++ +.|.+|. +..|++.|+|+..++.++|..+.++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567888988875 5677764 3457777888888999999888777754
No 279
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=51.92 E-value=45 Score=27.95 Aligned_cols=47 Identities=11% Similarity=0.003 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027439 171 LKAEEYCARAIL-----MSPNDGNV---LSMYGDLIWQSHKDASRAESYFDQAVK 217 (223)
Q Consensus 171 eeA~~~~ekAL~-----ldP~d~~~---l~~lA~ll~~~~G~~eeAi~~fekAL~ 217 (223)
++|...|++|+. +.|.+|.- ..+++.++|...++.++|...-++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567778887764 57888843 345566688889999999988888765
No 280
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=50.95 E-value=34 Score=25.48 Aligned_cols=48 Identities=19% Similarity=0.131 Sum_probs=23.9
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNV 190 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~ 190 (223)
-.++|+.+..+|++.+-. .++. ....-|.+|+++|.+++...+.++..
T Consensus 14 ~l~kAi~lv~~Ave~D~a-----g~y~----eAl~lY~~Aie~l~~alk~e~~~~~~ 61 (117)
T 2cpt_A 14 NLQKAIDLASKAAQEDKA-----GNYE----EALQLYQHAVQYFLHVVKYEAQGDKA 61 (117)
T ss_dssp HHHHHHHHHHHHHHHHHH-----TCHH----HHHHHHHHHHHHHHHHHHTSCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHc-----cCHH----HHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 357788888887644111 1111 11223445555555555555556543
No 281
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=50.56 E-value=25 Score=30.25 Aligned_cols=48 Identities=25% Similarity=0.401 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHH-----h--CCCCHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Q 027439 136 NSTDLYYQKMIQ-----A--DPRNPL---LLSNYARFLKEARGDLLKAEEYCARAILM 183 (223)
Q Consensus 136 ~eA~~~y~~aLe-----l--dP~n~~---~l~nlA~~l~~~~gdyeeA~~~~ekAL~l 183 (223)
+.|.++|++|++ + .|.+|. +..|++.|+|+.+++.++|..+.++|+.-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 566777777764 3 566653 34466667777778888888887777654
No 282
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=50.34 E-value=43 Score=26.53 Aligned_cols=46 Identities=4% Similarity=0.061 Sum_probs=24.7
Q ss_pred HHHHHHHHHHh--CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 027439 173 AEEYCARAILM--SPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 173 A~~~~ekAL~l--dP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
+..+|..+... .-..+..+..+|.++-. .|++.+|...|+++++..
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~-~~~~~~A~~Iy~~Gi~~~ 126 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEA-RENFRKADAIFQEGIQQK 126 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcC
Confidence 33444444433 23445555555644333 667777777777666553
No 283
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=49.52 E-value=48 Score=25.92 Aligned_cols=46 Identities=2% Similarity=0.058 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 027439 173 AEEYCARAILMS--PNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 173 A~~~~ekAL~ld--P~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
+.++|.-+.... -..+..+..+|.++-. .|++++|...|+++++..
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEA-QGELQHASAVLQRGIQNQ 131 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcC
Confidence 666666665544 4566777777755555 899999999999988764
No 284
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=49.40 E-value=22 Score=24.59 Aligned_cols=33 Identities=12% Similarity=-0.121 Sum_probs=19.4
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
-.++|+.+..+|++. +..++|++|+.+|..|++
T Consensus 9 ~l~~A~~l~~~Av~~----------------D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 9 FLTKGIELVQKAIDL----------------DTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHHHHH----------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----------------HHcCCHHHHHHHHHHHHH
Confidence 456777777777643 334566555555555554
No 285
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=48.30 E-value=77 Score=32.02 Aligned_cols=73 Identities=11% Similarity=-0.095 Sum_probs=47.8
Q ss_pred HHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh---C--------------------CCCHHHHHHHHHHHHHHc
Q 027439 146 IQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILM---S--------------------PNDGNVLSMYGDLIWQSH 202 (223)
Q Consensus 146 LeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l---d--------------------P~d~~~l~~lA~ll~~~~ 202 (223)
+...|.++...+.+|.++. ..|++++|..+|++|-.- + ...+..+.... .++...
T Consensus 835 ~~~~~~~~~~~yl~g~~~L-~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~-~LFe~~ 912 (1139)
T 4fhn_B 835 IGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLS-KKLFEE 912 (1139)
T ss_dssp HHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHH-HHHHHT
T ss_pred hhhccCCcHHHHHHHHHHH-hcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHH-HHHHHc
Confidence 3456777777778886666 589999999999887321 0 01122333333 355558
Q ss_pred CCHHHHHHHHHHHHHhCC
Q 027439 203 KDASRAESYFDQAVKAAP 220 (223)
Q Consensus 203 G~~eeAi~~fekAL~l~P 220 (223)
+.++-+++.-+.|++..+
T Consensus 913 ~~~~~vi~fa~lAi~~~~ 930 (1139)
T 4fhn_B 913 SAYIDALEFSLLADASKE 930 (1139)
T ss_dssp SCCHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhcc
Confidence 888888888888887653
No 286
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=48.19 E-value=55 Score=27.52 Aligned_cols=47 Identities=13% Similarity=0.071 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027439 171 LKAEEYCARAIL-----MSPNDGNV---LSMYGDLIWQSHKDASRAESYFDQAVK 217 (223)
Q Consensus 171 eeA~~~~ekAL~-----ldP~d~~~---l~~lA~ll~~~~G~~eeAi~~fekAL~ 217 (223)
+.|...|++|.. +.|.+|-- ..+++.++|...++.++|...-++|+.
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 667777887754 67888844 345556688878999999888777764
No 287
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=48.02 E-value=32 Score=25.04 Aligned_cols=29 Identities=24% Similarity=0.056 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 153 PLLLSNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 153 ~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
+-.+...|..+. +.++|++|+++.++|..
T Consensus 15 AH~~~RrAe~ll-~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLL-AAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHH-hcCCHHHHHHHHHHHHH
Confidence 334455554444 46777777777777654
No 288
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=46.72 E-value=1e+02 Score=24.20 Aligned_cols=55 Identities=9% Similarity=0.094 Sum_probs=39.6
Q ss_pred HHHHHhCCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHH--HHHHcCCHHHHHHHHHHHHHh
Q 027439 162 FLKEARGDLLKAEEYCARAILMSPND------GNVLSM-YGDL--IWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 162 ~l~~~~gdyeeA~~~~ekAL~ldP~d------~~~l~~-lA~l--l~~~~G~~eeAi~~fekAL~l 218 (223)
.++. .++|=+|-+.++.+....+.. ...+.. +|.. ++. .|+..-|...+.+|+..
T Consensus 41 ~lFn-~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~-rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 41 RLYN-SGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFD-FEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHH-TTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHH
T ss_pred HHHh-CCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 4553 699999999999999887655 222333 3322 333 89999999999999874
No 289
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=46.36 E-value=61 Score=27.44 Aligned_cols=47 Identities=15% Similarity=0.110 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHH-----hCCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027439 171 LKAEEYCARAIL-----MSPNDGNV---LSMYGDLIWQSHKDASRAESYFDQAVK 217 (223)
Q Consensus 171 eeA~~~~ekAL~-----ldP~d~~~---l~~lA~ll~~~~G~~eeAi~~fekAL~ 217 (223)
+.|...|++|.. +.|.+|.- ..+++.++|...++.++|...-++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567778887754 67888744 345566678889999999888777764
No 290
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=46.00 E-value=68 Score=23.79 Aligned_cols=26 Identities=15% Similarity=0.174 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHh
Q 027439 157 SNYARFLKEARGDLLKAEEYCARAILM 183 (223)
Q Consensus 157 ~nlA~~l~~~~gdyeeA~~~~ekAL~l 183 (223)
...| +-....++|++|+.+|..|+++
T Consensus 22 v~~A-ve~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 22 ASKA-AQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHH-HHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHccCHHHHHHHHHHHHHH
Confidence 4556 4455678999999999999885
No 291
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=45.37 E-value=65 Score=25.15 Aligned_cols=48 Identities=21% Similarity=0.299 Sum_probs=35.3
Q ss_pred HHHHHHHHHH--hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC
Q 027439 138 TDLYYQKMIQ--ADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPN 186 (223)
Q Consensus 138 A~~~y~~aLe--ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~ 186 (223)
+...|+.+.. +.-..+.+|..+|.++ +..+++.+|.+.|+++|..+..
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~l-E~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHL-EAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCc
Confidence 5555555553 3455678888888544 4689999999999999997654
No 292
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=45.21 E-value=66 Score=26.80 Aligned_cols=47 Identities=6% Similarity=0.056 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 027439 172 KAEEYCARAILMS--PNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKAA 219 (223)
Q Consensus 172 eA~~~~ekAL~ld--P~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l~ 219 (223)
.+..+|.-+.... -..+..|..+|.++-. .|++++|...|+++++..
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFES-RGLFQKADEVYQKGKRMK 180 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcC
Confidence 4445555555443 4556667777755444 888888888888888764
No 293
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=44.73 E-value=53 Score=27.38 Aligned_cols=49 Identities=18% Similarity=0.348 Sum_probs=36.9
Q ss_pred HHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC
Q 027439 137 STDLYYQKMIQ--ADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPN 186 (223)
Q Consensus 137 eA~~~y~~aLe--ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~ 186 (223)
.+...|..+.. +.-..+.+|..+|.++ +..++|.+|.++|+++|..+..
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~l-E~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYF-ESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHTCB
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCc
Confidence 45566666664 4456688899999544 4689999999999999997653
No 294
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=44.70 E-value=1.1e+02 Score=31.35 Aligned_cols=62 Identities=6% Similarity=-0.227 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 154 LLLSNYARFLKEARGDLLKAEEYCARAIL-----MSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 154 ~~l~nlA~~l~~~~gdyeeA~~~~ekAL~-----ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
..++.+-..+. +.|+.++|..++++..+ ..| |...+..+-..+.+ .|+.++|++.|++..+.
T Consensus 128 ~TynaLIdglc-K~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck-~G~~~eA~~Lf~eM~~~ 194 (1134)
T 3spa_A 128 QRLLAFFKCCL-LTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWAR-QGAFKELVYVLFMVKDA 194 (1134)
T ss_dssp HHHHHHHHHHH-HHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-hCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHh-CCCHHHHHHHHHHHHHc
Confidence 34555554555 58999999999976543 345 67777777777777 99999999999998765
No 295
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=44.57 E-value=63 Score=22.20 Aligned_cols=36 Identities=22% Similarity=0.245 Sum_probs=27.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 027439 158 NYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMY 194 (223)
Q Consensus 158 nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~l 194 (223)
.+|..+. ..|++++|+.+|-+|+...|.-...+..|
T Consensus 22 ~~GE~L~-~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~ 57 (73)
T 3ax2_A 22 QLGEELL-AQGDYEKGVDHLTNAIAVCGQPQQLLQVL 57 (73)
T ss_dssp HHHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHHHHH
T ss_pred HHHHHHH-HCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4565555 47899999999999999999766555433
No 296
>2i7u_A Four-alpha-helix bundle; HOMO dimer, anesthetic binding, de novo protein/ligand binding protein complex; NMR {Synthetic} PDB: 2jst_A
Probab=44.24 E-value=4.6 Score=26.22 Aligned_cols=6 Identities=67% Similarity=1.315 Sum_probs=2.7
Q ss_pred eeeccc
Q 027439 96 VLVGGG 101 (223)
Q Consensus 96 ~~~g~g 101 (223)
|+.|||
T Consensus 25 lleggg 30 (62)
T 2i7u_A 25 LLEGGG 30 (62)
T ss_dssp HHHCSS
T ss_pred HHhcCC
Confidence 444544
No 297
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=43.30 E-value=1.3e+02 Score=29.89 Aligned_cols=73 Identities=11% Similarity=-0.051 Sum_probs=45.3
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-hC--------------------CCCH--HHHHHHHHHHHH
Q 027439 144 KMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAIL-MS--------------------PNDG--NVLSMYGDLIWQ 200 (223)
Q Consensus 144 ~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~-ld--------------------P~d~--~~l~~lA~ll~~ 200 (223)
+.+..-|.++..-+-+|.++. ..|++++|..+|++|-. +. ++.. ..|.... -+++
T Consensus 831 eL~~~~~~t~~~~yv~gr~~L-~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~-~LFE 908 (950)
T 4gq2_M 831 QLIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLS-KKLF 908 (950)
T ss_dssp HHGGGCCSSHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHH-HHHH
T ss_pred HHHhhcCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHH-HHHH
Confidence 344566777777777886665 47888888888887632 11 1111 1222223 2555
Q ss_pred HcCCHHHHHHHHHHHHHh
Q 027439 201 SHKDASRAESYFDQAVKA 218 (223)
Q Consensus 201 ~~G~~eeAi~~fekAL~l 218 (223)
..+-++-++...+.|++.
T Consensus 909 ~~~a~~~vi~fA~lAI~~ 926 (950)
T 4gq2_M 909 EESAYIDALEFSLLADAS 926 (950)
T ss_dssp HTTCHHHHHHHHHHHHHT
T ss_pred hcCCHHHHHHHHHHHHhh
Confidence 578888888888888765
No 298
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=41.94 E-value=98 Score=28.21 Aligned_cols=45 Identities=22% Similarity=0.165 Sum_probs=33.3
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 173 AEEYCARAILM-----SPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 173 A~~~~ekAL~l-----dP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
++.+|.+||.. +..+.-.+..+|..+|+ .+++.+|+.++-.|-..
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR-~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYR-KKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhh-cchHHHHHHHHHHHHHH
Confidence 67777777764 23345556677777888 99999999999887543
No 299
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=38.57 E-value=61 Score=30.87 Aligned_cols=46 Identities=24% Similarity=0.241 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcC
Q 027439 156 LSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHK 203 (223)
Q Consensus 156 l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G 203 (223)
....|+..+ ..|+|.-|.+++..++..+|+|..+....|+++-+ +|
T Consensus 452 ~~~~a~~~~-~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~-l~ 497 (658)
T 2cfu_A 452 LLEQARASY-ARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQ-LG 497 (658)
T ss_dssp HHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-HH
Confidence 344555555 37999999999999999999999999999987654 44
No 300
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.33 E-value=26 Score=26.43 Aligned_cols=25 Identities=24% Similarity=0.179 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 157 SNYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 157 ~nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
.+.|..+-+ .++-++|+++|++.|.
T Consensus 26 Is~AL~~DE-~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 26 VNKGLNTDE-LGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHhhhhh-cCCHHHHHHHHHHHHH
Confidence 455533333 5888888888877766
No 301
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=36.88 E-value=58 Score=22.38 Aligned_cols=8 Identities=25% Similarity=0.264 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 027439 173 AEEYCARA 180 (223)
Q Consensus 173 A~~~~ekA 180 (223)
|+.+..+|
T Consensus 13 A~~l~~~A 20 (85)
T 2v6x_A 13 GIELVQKA 20 (85)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 302
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=36.60 E-value=89 Score=25.08 Aligned_cols=24 Identities=8% Similarity=0.029 Sum_probs=12.6
Q ss_pred ccCCCChHHHHHHHHHHHHhCCCC
Q 027439 129 DPNNHGNNSTDLYYQKMIQADPRN 152 (223)
Q Consensus 129 Y~~~gd~~eA~~~y~~aLeldP~n 152 (223)
+..+++|.+|.+++.+|++..|..
T Consensus 24 ~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 24 AMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHhCHHHHHHHHHHHHHHCCHh
Confidence 334455555555555555555543
No 303
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=36.47 E-value=67 Score=22.19 Aligned_cols=63 Identities=8% Similarity=0.122 Sum_probs=42.3
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYG 195 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA 195 (223)
-.++.|+.+++++-...-+++..|...-.++..-..+-......++++.++--++++.+..+.
T Consensus 8 ~~~~dA~~yl~~VK~rF~~~p~~Y~~FL~im~~fk~~~~~~~~v~~rV~~Lf~~hpdLi~gFn 70 (80)
T 2cr7_A 8 VHVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFN 70 (80)
T ss_dssp CCSCCSHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHGGGCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 367889999999988887888888777766654333222334566666666666676655443
No 304
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=36.15 E-value=90 Score=27.09 Aligned_cols=65 Identities=14% Similarity=0.004 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHH----------------H---hCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 027439 151 RNPLLLSNYARFLKEARGDLLKAEEYCARAI----------------L---MSPNDGNVLSMYGDLIWQSHKDASRAESY 211 (223)
Q Consensus 151 ~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL----------------~---ldP~d~~~l~~lA~ll~~~~G~~eeAi~~ 211 (223)
.++..+..+|..+. ..+++.+|+.+|-..- . -+|.........|.+.+...++...|...
T Consensus 132 Gdp~LH~~~a~~~~-~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~ 210 (312)
T 2wpv_A 132 GDPYLHNTIGSKLL-EGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHES 210 (312)
T ss_dssp CCHHHHHHHHHHHH-HTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHH
T ss_pred CCHHHHHHHHHHHh-hcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 57899999997777 4789999998774211 1 23444555666666666668888888888
Q ss_pred HHHHH
Q 027439 212 FDQAV 216 (223)
Q Consensus 212 fekAL 216 (223)
|+...
T Consensus 211 ~~~f~ 215 (312)
T 2wpv_A 211 KDIFL 215 (312)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 305
>2oc5_A Hypothetical protein; DUF3066 family protein, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.68A {Prochlorococcus marinus} SCOP: a.25.1.6
Probab=34.86 E-value=1.1e+02 Score=25.42 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 027439 136 NSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDL 197 (223)
Q Consensus 136 ~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~l 197 (223)
.+|-..|...-++-|++..-+..|++ +..+..++...|.|-+...|+-+.+...++.+
T Consensus 47 qeA~dNyi~la~llP~~~dEL~rLak----ME~rH~kgF~aCGrNL~V~pDm~fA~~fF~~L 104 (244)
T 2oc5_A 47 QEAHDNYIAIGTLLPDHVEELKRLAK----MEMRHKKGFTACGKNLGVEADMDFAREFFAPL 104 (244)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHH----HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHCcccHHHHHHHHH----HHHHHHhHHHHhccCCcCCCCcHHHHHHHHHH
Confidence 56777888888899999998888883 45678899999999999999988776666654
No 306
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=34.74 E-value=50 Score=28.36 Aligned_cols=48 Identities=21% Similarity=0.287 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHH-----h--CCCCHHH---HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 171 LKAEEYCARAIL-----M--SPNDGNV---LSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 171 eeA~~~~ekAL~-----l--dP~d~~~---l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
++|...|++|.+ + .|.+|-- ..+++.++|...++.++|...-++|+..
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 567778887764 4 6788743 3455556787799999999999998865
No 307
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=34.11 E-value=76 Score=25.06 Aligned_cols=48 Identities=17% Similarity=0.115 Sum_probs=35.3
Q ss_pred HHHHHHHHHH--hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC
Q 027439 138 TDLYYQKMIQ--ADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPN 186 (223)
Q Consensus 138 A~~~y~~aLe--ldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~ 186 (223)
+...|+.+.. +.-..+.+|..+|.+ ++..+++.+|.++|+++|..+..
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~-lE~~~~~~~A~~Iy~~Gi~~~A~ 128 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEE-YEARENFRKADAIFQEGIQQKAE 128 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHcCCC
Confidence 4455555553 345567888899954 44689999999999999997743
No 308
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=33.78 E-value=1.5e+02 Score=27.56 Aligned_cols=45 Identities=4% Similarity=0.001 Sum_probs=32.5
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 173 AEEYCARAILM-----SPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 173 A~~~~ekAL~l-----dP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
++.+|.+||.. +..+.-.+..+|..+|+ ++++.+|+.+|-.|-..
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR-~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTATV 347 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhh-cchHHHHHHHHHHHHHH
Confidence 56677777664 23345556677777888 99999999999887543
No 309
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=32.27 E-value=41 Score=33.45 Aligned_cols=52 Identities=13% Similarity=0.017 Sum_probs=39.8
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 027439 159 YARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESYFDQAV 216 (223)
Q Consensus 159 lA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL 216 (223)
+...+. ..+.++-|. ..+..-|.++..-+.+|.+++. .|++++|..+|+||-
T Consensus 816 l~~~L~-~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~-~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLF-LFKQYNACM----QLIGWLNSDPIAVYLKALIYLK-SKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHH-HTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHH-TTCHHHHHHHHHTCC
T ss_pred HHHHHH-HhcHHHHHH----HHHhhcCCChHHHHHHHHHHHH-cCCHHHHHHHHHHHh
Confidence 343444 367776544 4667888899888999988887 999999999999874
No 310
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=31.66 E-value=70 Score=19.07 Aligned_cols=13 Identities=31% Similarity=0.432 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHH
Q 027439 205 ASRAESYFDQAVK 217 (223)
Q Consensus 205 ~eeAi~~fekAL~ 217 (223)
|++|+.-|+.+++
T Consensus 18 yDKAVaSfk~alk 30 (37)
T 3s6n_M 18 YDKAVASFKHALK 30 (37)
T ss_pred HHHHHHHHHHHHh
Confidence 5555555555554
No 311
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=31.56 E-value=1.4e+02 Score=27.51 Aligned_cols=65 Identities=12% Similarity=0.107 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 152 NPLLLSNYARFLKEARG--DLLKAEEYCARAILM-----SPNDGNVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 152 n~~~l~nlA~~l~~~~g--dyeeA~~~~ekAL~l-----dP~d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
.+.++.+||. +.+... ....++.+|++||.. +..+.-.+..+|..+++ .+++.+|+.+|-.|-..
T Consensus 261 YPmALgnLgD-LEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R-~~~~~eAl~~wa~aa~V 332 (489)
T 4gq4_A 261 YPMALGNLAD-LEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTATV 332 (489)
T ss_dssp CHHHHHHHHH-HHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred cchhhhcccC-HhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHH-hhhHHHHHHHhhhhhhh
Confidence 4666677773 333222 223466777777773 23344445555877888 99999999999887543
No 312
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=31.00 E-value=45 Score=23.23 Aligned_cols=24 Identities=21% Similarity=0.122 Sum_probs=14.8
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH
Q 027439 158 NYARFLKEARGDLLKAEEYCARAIL 182 (223)
Q Consensus 158 nlA~~l~~~~gdyeeA~~~~ekAL~ 182 (223)
.+|+-+. ..|+|+.|+.+|+.++.
T Consensus 17 k~ARe~A-l~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 17 KLAREYA-LLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHH-HHTCCHHHHHHHHHHHH
T ss_pred HHHHHHH-HhcChHHHHHHHHHHHH
Confidence 4444444 35777777777776665
No 313
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.95 E-value=2.6e+02 Score=24.94 Aligned_cols=62 Identities=13% Similarity=0.059 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH-hCC-CC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027439 154 LLLSNYARFLKEARGDLLKAEEYCARAIL-MSP-ND----GNVLSMYGDLIWQSHKDASRAESYFDQAVK 217 (223)
Q Consensus 154 ~~l~nlA~~l~~~~gdyeeA~~~~ekAL~-ldP-~d----~~~l~~lA~ll~~~~G~~eeAi~~fekAL~ 217 (223)
.+...||..+. ..|++.+|...++.... ..- .+ ..++..-..+++. .+++.+|..+++++..
T Consensus 138 rl~~~La~i~e-~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~-~~d~~~a~~~~~ki~~ 205 (445)
T 4b4t_P 138 RVTKDLVEIKK-EEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL-KGDYSQATVLSRKILK 205 (445)
T ss_dssp HHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 34567785555 58999999999888753 221 22 2344445555666 8999999999999753
No 314
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=28.66 E-value=96 Score=22.52 Aligned_cols=23 Identities=17% Similarity=0.153 Sum_probs=12.8
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHH
Q 027439 169 DLLKAEEYCARAILMSPNDGNVLS 192 (223)
Q Consensus 169 dyeeA~~~~ekAL~ldP~d~~~l~ 192 (223)
...+|..++..|+++- ....++.
T Consensus 37 ch~kAa~yL~eAmklt-qs~qa~~ 59 (97)
T 2crb_A 37 CHRKATTYLSEAMKLT-ESEQAHL 59 (97)
T ss_dssp HHHHHHHHHHHHHTTC-CCHHHHH
T ss_pred HHHHHHHHHHHHHHhh-ccHHHHH
Confidence 3455666666666665 3455444
No 315
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=27.42 E-value=67 Score=22.83 Aligned_cols=27 Identities=15% Similarity=0.244 Sum_probs=16.4
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 027439 169 DLLKAEEYCARAILMSPNDGNVLSMYG 195 (223)
Q Consensus 169 dyeeA~~~~ekAL~ldP~d~~~l~~lA 195 (223)
+..+++.--.++++.+|+||.++-.|-
T Consensus 25 ~~~~~v~~Ai~~L~~~PsnPa~LAeyQ 51 (85)
T 2ca5_A 25 TLQGELTLALDKLAKNPSNPQLLAEYQ 51 (85)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 445555556666667777776655444
No 316
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.20 E-value=3.2e+02 Score=23.93 Aligned_cols=85 Identities=13% Similarity=0.004 Sum_probs=50.4
Q ss_pred CCChHHHHHHHHHHHHhC---------------CCC--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-------CCCC
Q 027439 132 NHGNNSTDLYYQKMIQAD---------------PRN--PLLLSNYARFLKEARGDLLKAEEYCARAILM-------SPND 187 (223)
Q Consensus 132 ~gd~~eA~~~y~~aLeld---------------P~n--~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l-------dP~d 187 (223)
..|.++|.+++++..+.- -.. ..+....+..+. ..++.++|..+++++-.. +|..
T Consensus 89 ~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl-~~~d~~~a~~~l~~~~~~l~~~~~~~~~v 167 (393)
T 4b4t_O 89 SKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYL-LKNDLVKARDLLDDLEKTLDKKDSIPLRI 167 (393)
T ss_dssp TTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHSCCSSSHH
T ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhhhccCCccHHH
Confidence 347888999888764321 012 344555664444 579999999999888642 1211
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 027439 188 GNVLSMYGDLIWQSHKDASRAESYFDQAVK 217 (223)
Q Consensus 188 ~~~l~~lA~ll~~~~G~~eeAi~~fekAL~ 217 (223)
...++.....+++..+++..+...+-.++.
T Consensus 168 ~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 168 TNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 122222233456668888877766666654
No 317
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=27.01 E-value=1.1e+02 Score=27.78 Aligned_cols=59 Identities=8% Similarity=0.156 Sum_probs=39.7
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHH
Q 027439 138 TDLYYQKMIQA-----DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILM------SPNDGNVLSMYGDL 197 (223)
Q Consensus 138 A~~~y~~aLel-----dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l------dP~d~~~l~~lA~l 197 (223)
++++|.+++.. +..+..-+..+|-++| +.+++.+|++.+-.|-.. .-+|.+++.-+-++
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~y-R~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eI 345 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYY-RKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEI 345 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhh-hcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence 67777777764 3445555667776677 689999999998877442 23455666555544
No 318
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=26.80 E-value=46 Score=22.91 Aligned_cols=28 Identities=11% Similarity=-0.088 Sum_probs=20.9
Q ss_pred cCCCChHHHHHHHHHHHHhCCCCHHHHH
Q 027439 130 PNNHGNNSTDLYYQKMIQADPRNPLLLS 157 (223)
Q Consensus 130 ~~~gd~~eA~~~y~~aLeldP~n~~~l~ 157 (223)
...|++++|..+|-+|+...|.-...+.
T Consensus 28 ~~~g~~~~~~~hf~nAl~Vc~qP~~LL~ 55 (73)
T 3ax2_A 28 LAQGDYEKGVDHLTNAIAVCGQPQQLLQ 55 (73)
T ss_dssp HHTTCHHHHHHHHHHHHHTCSSCHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3456788888888888888888776653
No 319
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=26.60 E-value=2e+02 Score=21.40 Aligned_cols=73 Identities=14% Similarity=0.085 Sum_probs=43.5
Q ss_pred CChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPR-NPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESY 211 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~-n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~ 211 (223)
...++|..+-+- ++..+. ....++++- .+. .+|+|++|..+.+... .|++-..+|-+-++ .|-.+++...
T Consensus 21 H~HqEA~tIAdw-L~~~~~~E~v~lIR~s-SLm-NrG~Yq~Al~l~~~~c-----~pdlepw~ALce~r-lGl~s~le~r 91 (116)
T 2p58_C 21 HYHEEANCIAEW-LHLKGEEEAVQLIRLS-SLM-NRGDYASALQQGNKLA-----YPDLEPWLALCEYR-LGLGSALESR 91 (116)
T ss_dssp TCHHHHHHHHHH-HHHTTCHHHHHHHHHH-HHH-HTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHH-HTCHHHHHHH
T ss_pred hHHHHHHHHHHH-HHhCCcHHHHHHHHHH-HHH-cchhHHHHHHhcCCCC-----CchHHHHHHHHHHh-cccHHHHHHH
Confidence 345666555444 455555 223344444 344 3699999998876544 33444445545677 8888888877
Q ss_pred HHH
Q 027439 212 FDQ 214 (223)
Q Consensus 212 fek 214 (223)
+.+
T Consensus 92 L~~ 94 (116)
T 2p58_C 92 LNR 94 (116)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 320
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=25.76 E-value=1.5e+02 Score=25.69 Aligned_cols=27 Identities=22% Similarity=0.263 Sum_probs=24.3
Q ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 027439 186 NDGNVLSMYGDLIWQSHKDASRAESYFD 213 (223)
Q Consensus 186 ~d~~~l~~lA~ll~~~~G~~eeAi~~fe 213 (223)
.|+..|..+|..++. .+++.+|+.+|-
T Consensus 132 Gdp~LH~~~a~~~~~-e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLE-GDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhh-cCCHHHHHHHHH
Confidence 488999999999998 999999999884
No 321
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=25.51 E-value=1.9e+02 Score=26.11 Aligned_cols=47 Identities=15% Similarity=0.220 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 171 LKAEEYCARAILMSPN-----------DGNVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 171 eeA~~~~ekAL~ldP~-----------d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
+.-+..++.|+..-|. -.-++..+|.+++. .+++++|+++.++++..
T Consensus 175 ~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~-~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 175 AQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLY-ARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHhc
Confidence 4455556667665443 24577788888777 89999999999999865
No 322
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=25.40 E-value=96 Score=22.38 Aligned_cols=48 Identities=19% Similarity=0.263 Sum_probs=33.9
Q ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLS 192 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~ 192 (223)
.|.++-..+|-+-+ .+|..+. ..|+++.|+.+|-+|+...|.=...+.
T Consensus 11 ~d~e~~e~~Fl~eV-----------~lGE~L~-~~g~~e~av~Hf~nAl~Vc~qP~~LL~ 58 (95)
T 1om2_A 11 KDAEAVQKFFLEEI-----------QLGEELL-AQGDYEKGVDHLTNAIAVCGQPQQLLQ 58 (95)
T ss_dssp SSHHHHHHHHHHHH-----------HHHHHHH-HHTCHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CCHHHHHHHHHHHH-----------HHHHHHH-HCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 36667777776643 4565555 478899999999999999886444443
No 323
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=25.39 E-value=1.2e+02 Score=28.06 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=39.6
Q ss_pred HHHHHHHHHHh-----CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHH
Q 027439 138 TDLYYQKMIQA-----DPRNPLLLSNYARFLKEARGDLLKAEEYCARAILM------SPNDGNVLSMYGDL 197 (223)
Q Consensus 138 A~~~y~~aLel-----dP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~l------dP~d~~~l~~lA~l 197 (223)
++++|.+++.. ...+..-|..+|-++| +.+++.+|+..+-.|-.. .-+|.+++.-+-++
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~y-R~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eI 367 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHC-RNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEV 367 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhh-hcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHH
Confidence 66777777764 3445555667776677 689999999988777442 24566666555554
No 324
>2czy_A Paired amphipathic helix protein SIN3B; SIN3, PAH1, transcriptional repressor, gene regulation; NMR {Mus musculus}
Probab=25.09 E-value=1.6e+02 Score=19.92 Aligned_cols=61 Identities=8% Similarity=0.135 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 027439 134 GNNSTDLYYQKMIQADPRNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMY 194 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~l 194 (223)
.++.|+.+++++-..--+++..|...-..+..-..+-......+++...+--++++.+..+
T Consensus 3 ~~~dA~~yl~~VK~~F~~~p~~Y~~FL~im~~~k~~~~~~~~v~~rv~~Lf~~hpdLi~gF 63 (77)
T 2czy_A 3 HVEDALTYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGF 63 (77)
T ss_dssp SHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCHHHHHHH
Confidence 4678888888888777777777766666655433322333456666666666666665443
No 325
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=23.34 E-value=2e+02 Score=20.25 Aligned_cols=56 Identities=11% Similarity=0.019 Sum_probs=35.8
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 027439 160 ARFLKEARGDLLKAEEYCARAILMSPNDG----NVLSMYGDLIWQ-SHKDASRAESYFDQAVKA 218 (223)
Q Consensus 160 A~~l~~~~gdyeeA~~~~ekAL~ldP~d~----~~l~~lA~ll~~-~~G~~eeAi~~fekAL~l 218 (223)
+..++. .++|=+|-+.++.+....|+.. ..+..+|..++. ..|+. |...|.+++..
T Consensus 8 ~~~lfn-~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~ 68 (94)
T 2cwy_A 8 VLGLWR-AGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEAR 68 (94)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHH
T ss_pred HHHHHh-CCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHH
Confidence 334553 5899999999999988875421 223333333332 36777 88888888763
No 326
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=23.12 E-value=2e+02 Score=21.42 Aligned_cols=74 Identities=8% Similarity=0.015 Sum_probs=43.9
Q ss_pred CChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 027439 133 HGNNSTDLYYQKMIQADPR-NPLLLSNYARFLKEARGDLLKAEEYCARAILMSPNDGNVLSMYGDLIWQSHKDASRAESY 211 (223)
Q Consensus 133 gd~~eA~~~y~~aLeldP~-n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d~~~l~~lA~ll~~~~G~~eeAi~~ 211 (223)
...++|..+-+- ++..+. ....++++- .+. .+|+|++|..+.+... .|++-..+|-+-++ .|-.+++...
T Consensus 20 H~HqEA~tIAdw-L~~~~~~E~v~lIR~s-SLm-NrG~Yq~Al~l~~~~c-----~pdlepw~ALce~r-lGl~s~le~r 90 (115)
T 2uwj_G 20 HCHEEALCIAEW-LERLGQDEAARLIRIS-SLA-NQGRYQEALAFAHGNP-----WPALEPWFALCEWH-LGLGAALDRR 90 (115)
T ss_dssp TCHHHHHHHHHH-HHHTTCHHHHHHHHHH-HHH-HTTCHHHHHGGGTTCC-----CGGGHHHHHHHHHH-TTCHHHHHHH
T ss_pred hHHHHHHHHHHH-HHhCCcHHHHHHHHHH-HHH-cchhHHHHHHhcCCCC-----CchHHHHHHHHHHh-cccHHHHHHH
Confidence 345666555444 455555 223344444 344 3699999988765543 34444445555677 8998888877
Q ss_pred HHHH
Q 027439 212 FDQA 215 (223)
Q Consensus 212 fekA 215 (223)
+.+.
T Consensus 91 L~~l 94 (115)
T 2uwj_G 91 LAGL 94 (115)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7443
No 327
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=22.59 E-value=1.1e+02 Score=27.95 Aligned_cols=83 Identities=8% Similarity=-0.016 Sum_probs=48.6
Q ss_pred ChHHHHHHHHHHHHhCC--CC----------H----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--------CC--C
Q 027439 134 GNNSTDLYYQKMIQADP--RN----------P----LLLSNYARFLKEARGDLLKAEEYCARAILMS--------PN--D 187 (223)
Q Consensus 134 d~~eA~~~y~~aLeldP--~n----------~----~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld--------P~--d 187 (223)
..++|.....+++...= .+ - .+.+++-+. |.+.++...+..++...-... |. -
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~ki-YFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNI-YFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHH-HHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHH-HHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 56777777777776511 11 1 123333433 335777777766664332221 21 1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 188 GNVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 188 ~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
...++.+|.++.. +++|.+|.+.+..|+..
T Consensus 220 v~Y~YYlGr~~~~-~~~y~~A~~~L~~A~~~ 249 (455)
T 3t5v_B 220 IEYRYLLGRYYLL-NSQVHNAFVQFNEAFQS 249 (455)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred EeeeHHHHHHHHH-HccHHHHHHHHHHHHHh
Confidence 3456667766655 88999999999888876
No 328
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=21.97 E-value=2.3e+02 Score=25.27 Aligned_cols=47 Identities=6% Similarity=0.040 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 171 LKAEEYCARAILMSPN--------DGNVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 171 eeA~~~~ekAL~ldP~--------d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
+.-+.-++.|+..=|. -.-++..+|.+++. .+++++|+++.++++..
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~-~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLY-KGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHhc
Confidence 4555667777765443 24567788888777 89999999999999863
No 329
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=21.51 E-value=2.7e+02 Score=24.73 Aligned_cols=48 Identities=17% Similarity=0.119 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 027439 170 LLKAEEYCARAILMSPN--------DGNVLSMYGDLIWQSHKDASRAESYFDQAVKA 218 (223)
Q Consensus 170 yeeA~~~~ekAL~ldP~--------d~~~l~~lA~ll~~~~G~~eeAi~~fekAL~l 218 (223)
|+..+..++.|+..-|. -.-++..+|.+++. .+++++|+++.++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~-~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLY-HDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHh-cccHHHHHHHHHHHHhC
Confidence 35556667777765443 34567788888777 89999999999999863
No 330
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=21.01 E-value=78 Score=23.01 Aligned_cols=19 Identities=16% Similarity=0.494 Sum_probs=9.6
Q ss_pred HHHHcCCHHHHHHHHHHHHH
Q 027439 198 IWQSHKDASRAESYFDQAVK 217 (223)
Q Consensus 198 l~~~~G~~eeAi~~fekAL~ 217 (223)
+|+ .++|.+|...|+++..
T Consensus 63 ~y~-~~ny~ea~~l~~k~~n 81 (106)
T 2vkj_A 63 LFE-TANYGEALVFFEKALN 81 (106)
T ss_dssp HHH-TTCHHHHHHHHHHHHH
T ss_pred HHH-hcchhHHHHHHHHHHc
Confidence 444 5555555555555543
No 331
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=20.56 E-value=3.4e+02 Score=23.74 Aligned_cols=91 Identities=8% Similarity=0.027 Sum_probs=0.0
Q ss_pred ccCCCChHHHHHHHHHHHHhCC----CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH------
Q 027439 129 DPNNHGNNSTDLYYQKMIQADP----RNPLLLSNYARFLKEARGDLLKAEEYCARAILMSPND-GNVLSMYGDL------ 197 (223)
Q Consensus 129 Y~~~gd~~eA~~~y~~aLeldP----~n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ldP~d-~~~l~~lA~l------ 197 (223)
+...|++.+|+..|+.+|..-| ++..--...-..+.. ..+|--|+.+=.+--++..++ ...+-..+.+
T Consensus 124 ~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~i-crEYilal~iEl~Rr~l~~~~~kR~lELAAYFT~c~LQ 202 (325)
T 3mv2_A 124 NFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILET-AREYILGLSIELERRSLKEGNTVRMLELAAYFTKAKLS 202 (325)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHH-HHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHGGGSCCC
T ss_pred HHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhccCCCc
Q ss_pred --------------HHHHcCCHHHHHHHHHHHHHhCCC
Q 027439 198 --------------IWQSHKDASRAESYFDQAVKAAPD 221 (223)
Q Consensus 198 --------------l~~~~G~~eeAi~~fekAL~l~Pd 221 (223)
.|+ .++|..|...-++.|+++|+
T Consensus 203 p~H~~LaLr~AM~~a~K-~KNy~tAa~fArrLLel~p~ 239 (325)
T 3mv2_A 203 PIHRTNALQVAMSQHFK-HKNFLQASYFAGEFLKIISS 239 (325)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHhcCCC
No 332
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=20.49 E-value=2.6e+02 Score=25.21 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHHhCCC-----------CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Q 027439 135 NNSTDLYYQKMIQADPR-----------NPLLLSNYARFLKEARGDLLKAEEYCARAILMS 184 (223)
Q Consensus 135 ~~eA~~~y~~aLeldP~-----------n~~~l~nlA~~l~~~~gdyeeA~~~~ekAL~ld 184 (223)
|+.-++-+++|+..-|. ...++.-+|+++. ..+++++|+.+++++|...
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL-~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACL-YARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhcC
Confidence 45556666777765543 2356677787666 4799999999999999764
Done!