Query 027441
Match_columns 223
No_of_seqs 200 out of 1982
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 16:41:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027441.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027441hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zfu_A Nucleomethylin, cerebra 99.9 1.1E-23 3.9E-28 170.7 12.3 149 75-223 1-149 (215)
2 4hg2_A Methyltransferase type 99.8 3.5E-21 1.2E-25 161.7 8.5 92 132-223 29-133 (257)
3 1vl5_A Unknown conserved prote 99.8 1.1E-18 3.9E-23 145.2 10.1 109 114-223 11-138 (260)
4 3ou2_A SAM-dependent methyltra 99.7 2.7E-17 9.1E-22 132.6 10.3 94 129-223 34-144 (218)
5 3f4k_A Putative methyltransfer 99.7 1.4E-17 4.9E-22 137.8 8.5 93 131-223 36-148 (257)
6 3hnr_A Probable methyltransfer 99.7 2.5E-17 8.7E-22 133.3 9.8 92 130-223 35-143 (220)
7 2p7i_A Hypothetical protein; p 99.7 1.6E-17 5.3E-22 136.2 8.6 93 130-223 31-139 (250)
8 4gek_A TRNA (CMO5U34)-methyltr 99.7 2.8E-17 9.4E-22 138.2 10.1 82 140-223 69-176 (261)
9 3h2b_A SAM-dependent methyltra 99.7 1.6E-17 5.3E-22 133.1 8.0 91 131-223 33-139 (203)
10 3kkz_A Uncharacterized protein 99.7 3.2E-17 1.1E-21 137.0 10.3 92 132-223 37-148 (267)
11 3l8d_A Methyltransferase; stru 99.7 3.4E-17 1.2E-21 134.3 10.1 83 141-223 53-151 (242)
12 2yqz_A Hypothetical protein TT 99.7 5.2E-17 1.8E-21 134.6 10.8 94 130-223 24-139 (263)
13 3ege_A Putative methyltransfer 99.7 1.7E-17 5.9E-22 138.5 7.8 93 129-223 23-128 (261)
14 3dlc_A Putative S-adenosyl-L-m 99.7 3.2E-17 1.1E-21 131.8 8.3 91 131-223 35-146 (219)
15 3g5l_A Putative S-adenosylmeth 99.7 1.1E-17 3.7E-22 138.6 5.4 83 141-223 44-143 (253)
16 1xxl_A YCGJ protein; structura 99.7 8.1E-17 2.8E-21 132.7 10.1 92 131-223 12-122 (239)
17 2o57_A Putative sarcosine dime 99.7 9.8E-17 3.4E-21 135.9 10.2 94 130-223 68-185 (297)
18 3ccf_A Cyclopropane-fatty-acyl 99.7 6.5E-17 2.2E-21 136.1 8.8 92 130-223 47-152 (279)
19 3dli_A Methyltransferase; PSI- 99.7 2.3E-17 8E-22 135.8 5.9 90 134-223 34-138 (240)
20 1nkv_A Hypothetical protein YJ 99.7 7.1E-17 2.4E-21 133.6 8.4 92 130-223 26-138 (256)
21 3bus_A REBM, methyltransferase 99.7 1.1E-16 3.8E-21 133.8 9.4 83 141-223 61-164 (273)
22 3vc1_A Geranyl diphosphate 2-C 99.7 1.4E-16 4.9E-21 136.3 10.3 93 131-223 107-219 (312)
23 1pjz_A Thiopurine S-methyltran 99.7 4.1E-17 1.4E-21 131.7 6.4 81 141-221 22-136 (203)
24 3dh0_A SAM dependent methyltra 99.7 6.1E-17 2.1E-21 131.0 7.0 93 130-223 27-141 (219)
25 3dtn_A Putative methyltransfer 99.7 9.9E-17 3.4E-21 131.1 7.9 93 130-223 33-146 (234)
26 3g5t_A Trans-aconitate 3-methy 99.7 1.4E-16 4.9E-21 135.3 9.0 83 141-223 36-147 (299)
27 1vlm_A SAM-dependent methyltra 99.7 4.2E-16 1.4E-20 126.6 11.3 82 141-223 47-137 (219)
28 3bkw_A MLL3908 protein, S-aden 99.7 1.7E-16 5.7E-21 130.1 8.7 93 130-223 33-142 (243)
29 4htf_A S-adenosylmethionine-de 99.7 1.3E-16 4.5E-21 134.4 7.6 83 141-223 68-171 (285)
30 3mgg_A Methyltransferase; NYSG 99.7 1.5E-16 5.2E-21 133.3 7.8 84 140-223 36-140 (276)
31 3jwg_A HEN1, methyltransferase 99.7 3.8E-16 1.3E-20 126.5 9.8 93 130-223 19-139 (219)
32 3ujc_A Phosphoethanolamine N-m 99.7 1.3E-16 4.4E-21 132.3 7.1 84 140-223 54-157 (266)
33 3e23_A Uncharacterized protein 99.7 1.5E-16 5.2E-21 128.2 7.2 93 130-223 32-139 (211)
34 2gb4_A Thiopurine S-methyltran 99.6 2.4E-16 8.1E-21 131.8 8.5 82 141-222 68-188 (252)
35 3gu3_A Methyltransferase; alph 99.6 2.5E-16 8.5E-21 133.1 8.5 93 130-223 11-124 (284)
36 3ofk_A Nodulation protein S; N 99.6 3.4E-16 1.2E-20 126.4 8.9 83 140-223 50-152 (216)
37 2gs9_A Hypothetical protein TT 99.6 2.9E-16 9.8E-21 126.4 8.3 83 141-223 36-130 (211)
38 2p35_A Trans-aconitate 2-methy 99.6 2.9E-16 9.9E-21 129.9 8.2 82 141-223 33-130 (259)
39 2p8j_A S-adenosylmethionine-de 99.6 5.8E-16 2E-20 124.2 9.6 94 130-223 12-126 (209)
40 3pfg_A N-methyltransferase; N, 99.6 7.2E-16 2.5E-20 128.3 10.2 92 131-223 39-149 (263)
41 3jwh_A HEN1; methyltransferase 99.6 5.2E-16 1.8E-20 125.7 9.0 93 130-223 19-139 (217)
42 3thr_A Glycine N-methyltransfe 99.6 3E-16 1E-20 132.6 7.7 93 130-223 47-173 (293)
43 3i9f_A Putative type 11 methyl 99.6 4.1E-16 1.4E-20 121.4 6.8 89 131-223 8-110 (170)
44 1xtp_A LMAJ004091AAA; SGPP, st 99.6 4.9E-16 1.7E-20 128.2 6.8 83 141-223 93-195 (254)
45 3bxo_A N,N-dimethyltransferase 99.6 8E-16 2.7E-20 125.7 7.4 83 140-223 39-139 (239)
46 3lcc_A Putative methyl chlorid 99.6 1.3E-15 4.5E-20 124.7 8.7 93 130-223 54-169 (235)
47 3sm3_A SAM-dependent methyltra 99.6 6.7E-16 2.3E-20 125.5 6.9 83 141-223 30-139 (235)
48 2xvm_A Tellurite resistance pr 99.6 1.3E-15 4.5E-20 120.9 8.3 92 130-223 22-134 (199)
49 1ve3_A Hypothetical protein PH 99.6 1.4E-15 4.7E-20 123.3 8.6 83 141-223 38-140 (227)
50 2ex4_A Adrenal gland protein A 99.6 4.1E-16 1.4E-20 128.3 5.2 83 141-223 79-183 (241)
51 3e8s_A Putative SAM dependent 99.6 6.9E-16 2.4E-20 124.7 6.4 93 130-223 42-150 (227)
52 1y8c_A S-adenosylmethionine-de 99.6 2.2E-15 7.7E-20 123.2 9.0 93 130-223 25-140 (246)
53 3cc8_A Putative methyltransfer 99.6 1.4E-15 4.7E-20 123.1 7.0 92 130-223 23-128 (230)
54 3iv6_A Putative Zn-dependent a 99.6 2.4E-15 8.3E-20 126.4 8.4 116 105-223 9-146 (261)
55 4fsd_A Arsenic methyltransfera 99.6 2.1E-15 7E-20 133.0 8.4 83 141-223 83-201 (383)
56 3hem_A Cyclopropane-fatty-acyl 99.6 2.4E-15 8.1E-20 128.0 8.3 81 140-223 71-181 (302)
57 3cgg_A SAM-dependent methyltra 99.6 7.3E-15 2.5E-19 115.7 10.4 83 141-223 46-145 (195)
58 1kpg_A CFA synthase;, cyclopro 99.6 3E-15 1E-19 126.1 8.4 81 140-223 63-166 (287)
59 2a14_A Indolethylamine N-methy 99.6 4.5E-16 1.5E-20 130.3 3.0 83 141-223 55-195 (263)
60 1ri5_A MRNA capping enzyme; me 99.6 2.9E-15 9.8E-20 126.3 8.0 84 140-223 63-172 (298)
61 2kw5_A SLR1183 protein; struct 99.6 1.9E-15 6.4E-20 120.8 6.5 90 131-223 20-129 (202)
62 3m70_A Tellurite resistance pr 99.6 4.4E-15 1.5E-19 125.2 8.9 92 130-223 110-221 (286)
63 2g72_A Phenylethanolamine N-me 99.6 9.4E-16 3.2E-20 129.7 4.2 94 130-223 59-213 (289)
64 2aot_A HMT, histamine N-methyl 99.6 1E-15 3.4E-20 129.9 4.3 83 141-223 52-170 (292)
65 2pxx_A Uncharacterized protein 99.6 5.5E-15 1.9E-19 118.5 8.4 93 131-223 31-157 (215)
66 3orh_A Guanidinoacetate N-meth 99.6 1E-15 3.5E-20 126.4 3.8 83 141-223 60-168 (236)
67 2avn_A Ubiquinone/menaquinone 99.6 7E-15 2.4E-19 122.5 8.2 83 141-223 54-150 (260)
68 4e2x_A TCAB9; kijanose, tetron 99.5 4E-16 1.4E-20 138.5 0.2 92 131-223 98-206 (416)
69 3g07_A 7SK snRNA methylphospha 99.5 4.3E-15 1.5E-19 126.3 6.3 83 141-223 46-218 (292)
70 1p91_A Ribosomal RNA large sub 99.5 2E-15 6.9E-20 126.0 4.2 88 130-223 72-176 (269)
71 3bkx_A SAM-dependent methyltra 99.5 2.2E-14 7.5E-19 119.8 10.1 92 131-223 34-157 (275)
72 3d2l_A SAM-dependent methyltra 99.5 1.8E-14 6.2E-19 117.9 9.4 82 141-223 33-135 (243)
73 1zx0_A Guanidinoacetate N-meth 99.5 2.4E-15 8.2E-20 123.6 3.8 83 141-223 60-168 (236)
74 2plw_A Ribosomal RNA methyltra 99.5 1.5E-14 5.1E-19 115.4 8.2 84 140-223 21-152 (201)
75 3ggd_A SAM-dependent methyltra 99.5 6.5E-15 2.2E-19 121.2 6.0 85 139-223 54-161 (245)
76 2fk8_A Methoxy mycolic acid sy 99.5 1.2E-14 4E-19 124.4 7.7 81 140-223 89-192 (318)
77 3g2m_A PCZA361.24; SAM-depende 99.5 1E-14 3.5E-19 123.9 7.3 91 130-223 73-188 (299)
78 1ej0_A FTSJ; methyltransferase 99.5 2.6E-14 9E-19 110.5 9.0 92 132-223 13-134 (180)
79 3ocj_A Putative exported prote 99.5 6.1E-15 2.1E-19 125.7 5.8 83 140-223 117-225 (305)
80 1wzn_A SAM-dependent methyltra 99.5 3.2E-14 1.1E-18 117.4 9.9 82 141-223 41-143 (252)
81 3mti_A RRNA methylase; SAM-dep 99.5 1.9E-14 6.4E-19 113.5 7.9 84 140-223 21-133 (185)
82 2vdw_A Vaccinia virus capping 99.5 5.9E-15 2E-19 126.4 5.3 83 141-223 48-167 (302)
83 3p9n_A Possible methyltransfer 99.5 1.3E-14 4.4E-19 115.1 6.6 94 130-223 31-151 (189)
84 3m33_A Uncharacterized protein 99.5 1.2E-14 4.1E-19 118.7 5.1 78 140-222 47-139 (226)
85 3q87_B N6 adenine specific DNA 99.5 7.7E-14 2.6E-18 109.3 9.5 95 127-223 8-121 (170)
86 3q7e_A Protein arginine N-meth 99.5 5.6E-14 1.9E-18 122.5 9.6 83 141-223 66-171 (349)
87 3e05_A Precorrin-6Y C5,15-meth 99.5 9.2E-14 3.1E-18 111.4 10.0 91 130-223 30-140 (204)
88 3bgv_A MRNA CAP guanine-N7 met 99.5 2.9E-14 9.8E-19 121.9 7.3 83 141-223 34-153 (313)
89 1dus_A MJ0882; hypothetical pr 99.5 8.2E-14 2.8E-18 109.6 9.2 93 129-223 41-155 (194)
90 1nt2_A Fibrillarin-like PRE-rR 99.5 4E-14 1.4E-18 115.0 7.5 82 140-223 56-159 (210)
91 3dou_A Ribosomal RNA large sub 99.5 8.2E-14 2.8E-18 111.6 9.2 92 132-223 16-137 (191)
92 2i62_A Nicotinamide N-methyltr 99.5 1.4E-14 4.8E-19 120.0 4.1 83 141-223 56-196 (265)
93 3lst_A CALO1 methyltransferase 99.5 1.6E-13 5.4E-18 119.3 10.8 89 131-223 175-284 (348)
94 3mq2_A 16S rRNA methyltransfer 99.5 3.1E-14 1.1E-18 115.2 5.8 90 132-223 19-138 (218)
95 2qe6_A Uncharacterized protein 99.5 1.6E-13 5.6E-18 115.8 9.9 93 131-223 67-194 (274)
96 1af7_A Chemotaxis receptor met 99.5 2.9E-13 1E-17 114.4 11.4 83 141-223 105-250 (274)
97 2fyt_A Protein arginine N-meth 99.5 1.5E-13 5E-18 119.5 9.7 83 140-222 63-168 (340)
98 2oxt_A Nucleoside-2'-O-methylt 99.5 1.2E-13 3.9E-18 116.3 8.7 81 140-223 73-183 (265)
99 3hm2_A Precorrin-6Y C5,15-meth 99.5 8E-14 2.8E-18 108.7 7.1 88 131-223 16-125 (178)
100 3lbf_A Protein-L-isoaspartate 99.5 9.3E-14 3.2E-18 111.6 7.5 89 129-223 66-172 (210)
101 1fp1_D Isoliquiritigenin 2'-O- 99.5 1.4E-13 4.9E-18 120.6 9.1 90 131-223 199-304 (372)
102 1xdz_A Methyltransferase GIDB; 99.5 1.2E-13 4.1E-18 113.8 8.1 80 141-223 70-172 (240)
103 2nyu_A Putative ribosomal RNA 99.5 1.7E-13 5.8E-18 108.7 8.4 84 140-223 21-143 (196)
104 1g6q_1 HnRNP arginine N-methyl 99.5 3.2E-13 1.1E-17 116.7 10.8 82 141-222 38-142 (328)
105 3uwp_A Histone-lysine N-methyl 99.4 3.9E-14 1.3E-18 125.5 4.9 93 130-223 163-286 (438)
106 3njr_A Precorrin-6Y methylase; 99.4 2.3E-13 8E-18 109.8 9.1 88 131-223 46-152 (204)
107 1yzh_A TRNA (guanine-N(7)-)-me 99.4 2E-13 6.9E-18 110.4 8.8 83 141-223 41-154 (214)
108 3htx_A HEN1; HEN1, small RNA m 99.4 2.8E-13 9.7E-18 128.3 10.8 93 129-223 710-832 (950)
109 3r0q_C Probable protein argini 99.4 2.1E-13 7E-18 120.1 9.1 83 140-223 62-167 (376)
110 3sso_A Methyltransferase; macr 99.4 8.2E-14 2.8E-18 123.0 6.5 82 141-223 216-322 (419)
111 2y1w_A Histone-arginine methyl 99.4 3.2E-13 1.1E-17 117.6 10.0 91 131-223 41-153 (348)
112 4hc4_A Protein arginine N-meth 99.4 3.9E-13 1.3E-17 118.3 10.6 81 141-222 83-186 (376)
113 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.1E-13 3.7E-18 112.4 6.4 83 141-223 38-151 (213)
114 2wa2_A Non-structural protein 99.4 1.4E-13 4.9E-18 116.4 7.3 81 140-223 81-191 (276)
115 3gwz_A MMCR; methyltransferase 99.4 7.1E-13 2.4E-17 116.1 11.9 80 141-223 202-305 (369)
116 3p9c_A Caffeic acid O-methyltr 99.4 6.6E-13 2.3E-17 116.3 11.7 90 131-223 191-296 (364)
117 3reo_A (ISO)eugenol O-methyltr 99.4 4.5E-13 1.5E-17 117.5 10.4 80 141-223 203-298 (368)
118 3fpf_A Mtnas, putative unchara 99.4 1.8E-13 6.2E-18 116.6 7.6 82 138-223 119-220 (298)
119 3dmg_A Probable ribosomal RNA 99.4 2.6E-13 8.8E-18 119.8 8.8 83 141-223 233-338 (381)
120 2ip2_A Probable phenazine-spec 99.4 8.8E-13 3E-17 113.5 11.8 78 143-223 169-270 (334)
121 3hp7_A Hemolysin, putative; st 99.4 2E-13 7E-18 116.2 7.6 91 131-223 75-183 (291)
122 3dp7_A SAM-dependent methyltra 99.4 8.9E-13 3E-17 115.3 11.7 82 141-223 179-285 (363)
123 2fhp_A Methylase, putative; al 99.4 6E-14 2E-18 110.3 3.8 94 130-223 33-152 (187)
124 2r3s_A Uncharacterized protein 99.4 2.5E-13 8.4E-18 116.8 7.9 93 130-223 153-269 (335)
125 3i53_A O-methyltransferase; CO 99.4 9.7E-13 3.3E-17 113.4 11.6 80 141-223 169-272 (332)
126 1jsx_A Glucose-inhibited divis 99.4 6.4E-13 2.2E-17 106.3 9.7 93 127-223 49-163 (207)
127 2bm8_A Cephalosporin hydroxyla 99.4 9.2E-13 3.1E-17 108.7 10.8 89 132-223 73-185 (236)
128 2ift_A Putative methylase HI07 99.4 9.6E-14 3.3E-18 111.7 4.5 94 130-223 42-161 (201)
129 3dxy_A TRNA (guanine-N(7)-)-me 99.4 8E-14 2.7E-18 113.9 3.9 83 141-223 34-148 (218)
130 3gdh_A Trimethylguanosine synt 99.4 4.9E-15 1.7E-19 121.7 -3.4 92 130-222 67-178 (241)
131 1x19_A CRTF-related protein; m 99.4 9.2E-13 3.1E-17 114.7 10.8 92 128-223 178-293 (359)
132 2esr_A Methyltransferase; stru 99.4 5.1E-14 1.7E-18 110.2 2.2 95 129-223 19-136 (177)
133 4df3_A Fibrillarin-like rRNA/T 99.4 6.9E-13 2.4E-17 109.5 8.9 83 140-223 76-180 (233)
134 1vbf_A 231AA long hypothetical 99.4 4.7E-13 1.6E-17 109.0 7.7 89 129-223 59-163 (231)
135 3evz_A Methyltransferase; NYSG 99.4 1.3E-12 4.3E-17 106.4 9.8 84 140-223 54-177 (230)
136 1qzz_A RDMB, aclacinomycin-10- 99.4 1.1E-12 3.8E-17 114.5 10.1 90 130-223 172-285 (374)
137 1fbn_A MJ fibrillarin homologu 99.4 6.2E-13 2.1E-17 108.8 7.9 77 141-223 74-176 (230)
138 2fpo_A Methylase YHHF; structu 99.4 2.3E-13 7.8E-18 109.5 5.2 93 131-223 44-158 (202)
139 1fp2_A Isoflavone O-methyltran 99.4 1.1E-12 3.9E-17 113.9 10.0 79 141-223 188-286 (352)
140 1dl5_A Protein-L-isoaspartate 99.4 6.8E-13 2.3E-17 114.0 7.6 89 129-223 64-173 (317)
141 3lpm_A Putative methyltransfer 99.4 4.8E-13 1.7E-17 111.5 6.4 92 132-223 39-174 (259)
142 3eey_A Putative rRNA methylase 99.4 4.7E-13 1.6E-17 106.4 5.9 84 140-223 21-137 (197)
143 3mcz_A O-methyltransferase; ad 99.4 1.9E-12 6.6E-17 112.2 10.0 93 131-223 169-285 (352)
144 3ckk_A TRNA (guanine-N(7)-)-me 99.4 6.1E-13 2.1E-17 109.8 6.5 83 141-223 46-166 (235)
145 3p2e_A 16S rRNA methylase; met 99.4 5E-13 1.7E-17 109.6 5.9 83 141-223 24-137 (225)
146 3grz_A L11 mtase, ribosomal pr 99.4 9.4E-13 3.2E-17 105.4 7.2 79 141-223 60-157 (205)
147 3g89_A Ribosomal RNA small sub 99.4 4.9E-13 1.7E-17 111.4 5.4 80 141-223 80-182 (249)
148 1l3i_A Precorrin-6Y methyltran 99.4 5.9E-13 2E-17 104.4 5.4 90 130-223 23-132 (192)
149 1tw3_A COMT, carminomycin 4-O- 99.4 4.9E-12 1.7E-16 109.9 11.7 90 130-223 173-286 (360)
150 3opn_A Putative hemolysin; str 99.4 5.6E-13 1.9E-17 110.0 5.3 92 130-223 26-135 (232)
151 2yxe_A Protein-L-isoaspartate 99.3 1.5E-12 5.2E-17 104.8 7.7 88 130-223 67-175 (215)
152 4dzr_A Protein-(glutamine-N5) 99.3 1.6E-13 5.6E-18 109.7 1.8 92 130-222 19-162 (215)
153 2p41_A Type II methyltransfera 99.3 1.2E-12 4.3E-17 112.1 7.4 82 140-223 81-189 (305)
154 3u81_A Catechol O-methyltransf 99.3 9.1E-13 3.1E-17 107.1 6.2 82 141-223 58-168 (221)
155 3ntv_A MW1564 protein; rossman 99.3 2.3E-12 7.9E-17 105.7 8.1 81 141-223 71-174 (232)
156 2yxd_A Probable cobalt-precorr 99.3 1.6E-12 5.5E-17 101.3 6.7 87 130-223 25-129 (183)
157 4dcm_A Ribosomal RNA large sub 99.3 1.5E-12 5E-17 114.7 7.0 91 131-223 213-332 (375)
158 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.7E-12 5.7E-17 106.3 6.6 81 141-223 77-180 (233)
159 3c3p_A Methyltransferase; NP_9 99.3 4.3E-12 1.5E-16 102.1 8.5 90 131-223 46-158 (210)
160 1zg3_A Isoflavanone 4'-O-methy 99.3 5.5E-12 1.9E-16 109.8 9.6 80 141-223 193-291 (358)
161 2pjd_A Ribosomal RNA small sub 99.3 1.3E-12 4.4E-17 113.5 5.5 92 129-223 185-301 (343)
162 2gpy_A O-methyltransferase; st 99.3 3.8E-12 1.3E-16 104.0 7.9 90 131-223 45-158 (233)
163 1ws6_A Methyltransferase; stru 99.3 5E-13 1.7E-17 103.3 2.3 93 130-223 29-145 (171)
164 3fzg_A 16S rRNA methylase; met 99.3 6.4E-13 2.2E-17 106.2 2.7 82 140-222 48-149 (200)
165 3r3h_A O-methyltransferase, SA 99.3 1.1E-12 3.7E-17 108.7 3.7 81 141-223 60-168 (242)
166 2ld4_A Anamorsin; methyltransf 99.3 6.8E-13 2.3E-17 103.9 2.4 73 140-223 11-99 (176)
167 3tfw_A Putative O-methyltransf 99.3 3E-12 1E-16 106.2 6.3 91 131-223 53-168 (248)
168 3id6_C Fibrillarin-like rRNA/T 99.3 1.1E-11 3.6E-16 102.4 9.4 82 140-223 75-179 (232)
169 1jg1_A PIMT;, protein-L-isoasp 99.3 5.6E-12 1.9E-16 103.3 7.7 88 129-223 80-187 (235)
170 3dr5_A Putative O-methyltransf 99.3 7.8E-12 2.7E-16 102.2 8.5 91 131-223 43-161 (221)
171 3b3j_A Histone-arginine methyl 99.3 2.8E-12 9.5E-17 116.4 6.3 82 141-223 158-261 (480)
172 2ozv_A Hypothetical protein AT 99.3 6.5E-12 2.2E-16 105.0 7.9 85 139-223 34-168 (260)
173 1u2z_A Histone-lysine N-methyl 99.3 4.7E-12 1.6E-16 113.3 7.3 93 130-223 232-357 (433)
174 2pbf_A Protein-L-isoaspartate 99.3 5.3E-12 1.8E-16 102.6 7.0 88 131-223 69-191 (227)
175 2b3t_A Protein methyltransfera 99.3 9.3E-12 3.2E-16 104.6 8.4 82 141-223 109-236 (276)
176 2frn_A Hypothetical protein PH 99.3 6.4E-12 2.2E-16 106.0 7.4 79 141-223 125-223 (278)
177 1yb2_A Hypothetical protein TA 99.3 4E-12 1.4E-16 106.8 6.1 86 131-223 101-209 (275)
178 1g8a_A Fibrillarin-like PRE-rR 99.3 1.2E-11 4.1E-16 100.6 8.6 81 141-223 73-176 (227)
179 1i1n_A Protein-L-isoaspartate 99.3 6.9E-12 2.4E-16 101.8 7.1 88 131-223 66-180 (226)
180 1o9g_A RRNA methyltransferase; 99.3 3.7E-12 1.3E-16 105.3 5.5 83 141-223 51-212 (250)
181 1r18_A Protein-L-isoaspartate( 99.3 6.5E-12 2.2E-16 102.3 6.7 88 130-223 72-192 (227)
182 2pwy_A TRNA (adenine-N(1)-)-me 99.2 9.7E-12 3.3E-16 102.6 7.4 88 131-223 87-196 (258)
183 2b25_A Hypothetical protein; s 99.2 1.3E-11 4.4E-16 106.6 8.4 89 130-223 95-217 (336)
184 3mb5_A SAM-dependent methyltra 99.2 8.6E-12 2.9E-16 103.1 6.9 87 131-223 84-192 (255)
185 1i9g_A Hypothetical protein RV 99.2 7E-12 2.4E-16 105.0 6.0 88 131-223 90-201 (280)
186 4azs_A Methyltransferase WBDD; 99.2 1.8E-12 6E-17 119.9 2.2 83 140-222 65-170 (569)
187 3duw_A OMT, O-methyltransferas 99.2 5.2E-12 1.8E-16 102.3 4.8 91 131-223 48-165 (223)
188 3bzb_A Uncharacterized protein 99.2 1.9E-11 6.6E-16 103.2 8.0 83 141-223 79-203 (281)
189 1sui_A Caffeoyl-COA O-methyltr 99.2 8.6E-12 2.9E-16 103.6 5.7 91 131-223 69-188 (247)
190 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.6E-11 5.3E-16 101.5 7.2 83 141-223 49-171 (246)
191 3giw_A Protein of unknown func 99.2 2.1E-11 7E-16 102.9 7.5 93 131-223 68-198 (277)
192 3tr6_A O-methyltransferase; ce 99.2 4.4E-12 1.5E-16 102.8 3.0 90 132-223 55-172 (225)
193 2yvl_A TRMI protein, hypotheti 99.2 4E-11 1.4E-15 98.3 8.7 88 131-223 82-188 (248)
194 3adn_A Spermidine synthase; am 99.2 3.8E-11 1.3E-15 102.3 8.8 83 141-223 83-196 (294)
195 1ixk_A Methyltransferase; open 99.2 1.9E-11 6.5E-16 105.0 6.7 93 131-223 108-244 (315)
196 4a6d_A Hydroxyindole O-methylt 99.2 5.7E-11 2E-15 103.5 9.8 81 141-223 179-281 (353)
197 2nxc_A L11 mtase, ribosomal pr 99.2 8.8E-12 3E-16 103.8 4.3 81 140-223 119-216 (254)
198 3a27_A TYW2, uncharacterized p 99.2 2.9E-11 9.8E-16 101.8 6.8 81 139-223 117-217 (272)
199 3cbg_A O-methyltransferase; cy 99.2 1.4E-11 4.9E-16 101.0 4.7 81 141-223 72-180 (232)
200 3bwc_A Spermidine synthase; SA 99.2 1.2E-11 3.9E-16 105.9 3.8 83 141-223 95-208 (304)
201 2xyq_A Putative 2'-O-methyl tr 99.2 1.1E-10 3.7E-15 99.3 9.5 83 140-223 62-169 (290)
202 1ne2_A Hypothetical protein TA 99.2 8.9E-11 3.1E-15 93.5 8.3 76 141-221 51-143 (200)
203 1o54_A SAM-dependent O-methylt 99.1 4.1E-11 1.4E-15 100.6 6.1 87 131-223 103-211 (277)
204 2avd_A Catechol-O-methyltransf 99.1 2.9E-11 9.8E-16 98.2 4.9 89 133-223 61-177 (229)
205 2h00_A Methyltransferase 10 do 99.1 9.5E-12 3.3E-16 102.9 2.0 82 141-222 65-189 (254)
206 3tma_A Methyltransferase; thum 99.1 1.2E-10 4E-15 101.4 8.6 84 140-223 202-315 (354)
207 2igt_A SAM dependent methyltra 99.1 1.9E-11 6.4E-16 105.9 3.3 93 131-223 143-270 (332)
208 1nv8_A HEMK protein; class I a 99.1 1.9E-10 6.7E-15 97.4 9.2 89 131-223 114-247 (284)
209 2yxl_A PH0851 protein, 450AA l 99.1 1.6E-10 5.5E-15 103.9 8.9 93 131-223 249-387 (450)
210 3gjy_A Spermidine synthase; AP 99.1 8.2E-11 2.8E-15 101.2 6.6 81 143-223 91-198 (317)
211 2hnk_A SAM-dependent O-methylt 99.1 6.3E-11 2.1E-15 97.3 5.2 81 141-223 60-179 (239)
212 1zq9_A Probable dimethyladenos 99.1 3.9E-11 1.3E-15 101.7 3.8 92 128-222 16-144 (285)
213 3c3y_A Pfomt, O-methyltransfer 99.1 5.8E-11 2E-15 97.8 4.3 90 132-223 61-179 (237)
214 3ajd_A Putative methyltransfer 99.1 7.3E-11 2.5E-15 99.3 4.9 85 139-223 81-209 (274)
215 1xj5_A Spermidine synthase 1; 99.1 8E-11 2.7E-15 102.1 5.1 83 141-223 120-233 (334)
216 3frh_A 16S rRNA methylase; met 99.1 3E-10 1E-14 93.8 7.8 91 130-222 94-203 (253)
217 1iy9_A Spermidine synthase; ro 99.1 1.2E-10 4E-15 98.3 5.3 83 141-223 75-187 (275)
218 1uir_A Polyamine aminopropyltr 99.1 7.1E-11 2.4E-15 101.4 4.0 83 141-223 77-193 (314)
219 3lec_A NADB-rossmann superfami 99.0 1.6E-10 5.5E-15 95.1 5.6 83 140-223 20-123 (230)
220 3gnl_A Uncharacterized protein 99.0 8.1E-11 2.8E-15 97.7 3.8 83 140-223 20-123 (244)
221 3kr9_A SAM-dependent methyltra 99.0 1.9E-10 6.6E-15 94.3 5.8 82 140-223 14-117 (225)
222 1inl_A Spermidine synthase; be 99.0 1.4E-10 4.7E-15 98.8 5.0 83 141-223 90-203 (296)
223 1yub_A Ermam, rRNA methyltrans 99.0 6.2E-11 2.1E-15 98.0 2.6 95 127-223 16-143 (245)
224 1sqg_A SUN protein, FMU protei 99.0 8.3E-10 2.8E-14 98.6 10.1 85 139-223 244-372 (429)
225 2cmg_A Spermidine synthase; tr 99.0 3.7E-10 1.3E-14 94.6 7.0 76 141-223 72-169 (262)
226 2o07_A Spermidine synthase; st 99.0 1.4E-10 4.7E-15 99.3 3.9 83 141-223 95-207 (304)
227 2i7c_A Spermidine synthase; tr 99.0 1.7E-10 5.7E-15 97.7 4.2 83 141-223 78-190 (283)
228 2qm3_A Predicted methyltransfe 99.0 6.1E-10 2.1E-14 97.7 7.0 79 141-220 172-272 (373)
229 2b2c_A Spermidine synthase; be 99.0 1.8E-10 6.3E-15 99.0 3.7 83 141-223 108-220 (314)
230 2pt6_A Spermidine synthase; tr 99.0 2.2E-10 7.6E-15 98.7 4.2 83 141-223 116-228 (321)
231 2frx_A Hypothetical protein YE 99.0 8.1E-10 2.8E-14 100.1 7.9 83 141-223 117-244 (479)
232 1wy7_A Hypothetical protein PH 99.0 1.7E-09 5.8E-14 86.3 8.8 77 141-222 49-146 (207)
233 3tm4_A TRNA (guanine N2-)-meth 99.0 8.8E-10 3E-14 96.7 6.9 90 129-221 207-326 (373)
234 4gqb_A Protein arginine N-meth 98.9 1.7E-09 5.7E-14 100.7 8.9 116 95-222 319-464 (637)
235 2h1r_A Dimethyladenosine trans 98.9 1.2E-09 4E-14 93.2 7.2 89 129-220 31-154 (299)
236 2ih2_A Modification methylase 98.9 2.1E-09 7.1E-14 95.0 8.5 97 125-223 24-162 (421)
237 2b78_A Hypothetical protein SM 98.9 4.5E-10 1.5E-14 99.0 4.1 84 140-223 211-329 (385)
238 3v97_A Ribosomal RNA large sub 98.9 4.2E-10 1.4E-14 106.4 4.1 88 136-223 534-655 (703)
239 3evf_A RNA-directed RNA polyme 98.9 2.2E-09 7.4E-14 90.0 7.8 84 140-223 73-182 (277)
240 1mjf_A Spermidine synthase; sp 98.9 7.1E-10 2.4E-14 93.7 4.6 82 141-223 75-191 (281)
241 3m6w_A RRNA methylase; rRNA me 98.9 5.5E-10 1.9E-14 100.7 4.0 90 133-223 94-227 (464)
242 1wxx_A TT1595, hypothetical pr 98.9 2.6E-10 8.8E-15 100.4 1.5 89 134-223 203-323 (382)
243 3lcv_B Sisomicin-gentamicin re 98.9 1.9E-09 6.4E-14 90.0 6.3 81 140-222 131-233 (281)
244 2f8l_A Hypothetical protein LM 98.9 2.9E-09 1E-13 92.2 7.8 82 141-223 130-254 (344)
245 3k6r_A Putative transferase PH 98.9 2.7E-09 9.4E-14 90.1 6.9 79 140-222 124-222 (278)
246 1qam_A ERMC' methyltransferase 98.9 1.5E-10 5.3E-15 95.8 -1.0 80 141-221 30-142 (244)
247 3m4x_A NOL1/NOP2/SUN family pr 98.9 1.1E-09 3.7E-14 98.6 4.4 84 139-223 103-232 (456)
248 2yx1_A Hypothetical protein MJ 98.9 3.4E-09 1.1E-13 91.7 7.1 77 140-223 194-289 (336)
249 3c0k_A UPF0064 protein YCCW; P 98.9 1.1E-09 3.7E-14 96.8 4.1 84 140-223 219-337 (396)
250 3ua3_A Protein arginine N-meth 98.9 2.6E-09 9E-14 99.8 6.6 116 96-222 375-531 (745)
251 3gru_A Dimethyladenosine trans 98.8 4.4E-09 1.5E-13 89.6 6.6 74 127-201 37-126 (295)
252 2as0_A Hypothetical protein PH 98.8 1.1E-09 3.8E-14 96.7 2.9 83 141-223 217-333 (396)
253 2okc_A Type I restriction enzy 98.8 7.2E-09 2.5E-13 92.9 8.0 97 125-223 156-305 (445)
254 1uwv_A 23S rRNA (uracil-5-)-me 98.8 1.1E-08 3.7E-13 91.5 8.4 89 131-223 277-387 (433)
255 4dmg_A Putative uncharacterize 98.8 4.6E-09 1.6E-13 92.9 5.8 83 141-223 214-324 (393)
256 2jjq_A Uncharacterized RNA met 98.8 3.1E-08 1.1E-12 88.4 9.9 80 140-223 289-385 (425)
257 3b5i_A S-adenosyl-L-methionine 98.7 2.9E-08 1E-12 87.1 8.1 82 142-223 53-223 (374)
258 3gcz_A Polyprotein; flavivirus 98.7 2.7E-08 9.4E-13 83.4 7.2 83 140-223 89-199 (282)
259 3eld_A Methyltransferase; flav 98.6 2.6E-07 9E-12 78.0 10.3 92 130-223 71-189 (300)
260 3tqs_A Ribosomal RNA small sub 98.6 7.3E-08 2.5E-12 80.4 6.5 69 128-198 17-105 (255)
261 3fut_A Dimethyladenosine trans 98.5 7.3E-08 2.5E-12 81.1 5.8 72 128-201 35-122 (271)
262 2efj_A 3,7-dimethylxanthine me 98.5 8.3E-08 2.8E-12 84.4 4.7 82 142-223 53-223 (384)
263 2ar0_A M.ecoki, type I restric 98.5 1.1E-07 3.6E-12 87.4 5.1 98 125-223 154-310 (541)
264 3bt7_A TRNA (uracil-5-)-methyl 98.5 7.7E-08 2.6E-12 84.1 3.7 77 142-223 214-324 (369)
265 4auk_A Ribosomal RNA large sub 98.5 4.8E-07 1.6E-11 79.0 8.7 75 140-217 210-295 (375)
266 2qfm_A Spermine synthase; sper 98.4 9.4E-08 3.2E-12 83.3 3.8 83 141-223 188-312 (364)
267 2px2_A Genome polyprotein [con 98.4 4.7E-07 1.6E-11 75.0 7.4 82 139-223 71-181 (269)
268 2b9e_A NOL1/NOP2/SUN domain fa 98.4 8.3E-07 2.8E-11 75.9 8.9 83 139-222 100-231 (309)
269 3ftd_A Dimethyladenosine trans 98.4 3.8E-07 1.3E-11 75.6 6.7 59 128-187 19-92 (249)
270 3k0b_A Predicted N6-adenine-sp 98.4 5E-07 1.7E-11 79.8 7.4 83 140-223 200-348 (393)
271 1m6e_X S-adenosyl-L-methionnin 98.3 2.4E-07 8.2E-12 80.8 4.0 83 141-223 51-207 (359)
272 3ldu_A Putative methylase; str 98.3 3.4E-07 1.1E-11 80.7 5.0 83 140-223 194-342 (385)
273 3ldg_A Putative uncharacterize 98.3 1.3E-06 4.5E-11 76.9 7.9 83 140-223 193-341 (384)
274 3p8z_A Mtase, non-structural p 98.3 2.5E-06 8.6E-11 69.8 8.7 81 140-223 77-184 (267)
275 2k4m_A TR8_protein, UPF0146 pr 98.3 1E-06 3.5E-11 67.1 6.0 68 131-198 24-98 (153)
276 2r6z_A UPF0341 protein in RSP 98.3 1E-07 3.6E-12 79.5 -0.2 61 141-201 83-173 (258)
277 3axs_A Probable N(2),N(2)-dime 98.2 3.6E-07 1.2E-11 80.7 2.6 80 141-223 52-156 (392)
278 3uzu_A Ribosomal RNA small sub 98.2 9.3E-07 3.2E-11 74.6 4.8 59 128-187 30-106 (279)
279 1qyr_A KSGA, high level kasuga 98.2 4.1E-07 1.4E-11 75.6 2.6 69 129-199 10-100 (252)
280 2dul_A N(2),N(2)-dimethylguano 98.2 3E-07 1E-11 80.8 1.4 80 141-223 47-162 (378)
281 3khk_A Type I restriction-modi 98.2 3.4E-06 1.2E-10 77.4 8.4 98 124-223 229-393 (544)
282 3lkz_A Non-structural protein 98.2 8.7E-06 3E-10 68.7 10.0 81 140-223 93-202 (321)
283 1m6y_A S-adenosyl-methyltransf 98.2 6.7E-07 2.3E-11 76.3 3.3 68 129-197 15-106 (301)
284 3o4f_A Spermidine synthase; am 98.2 5.4E-06 1.8E-10 70.3 8.2 84 140-223 82-196 (294)
285 2oyr_A UPF0341 protein YHIQ; a 98.1 5.1E-07 1.8E-11 75.4 1.5 86 130-216 76-191 (258)
286 3lkd_A Type I restriction-modi 98.1 8.4E-06 2.9E-10 74.8 8.6 100 124-223 201-356 (542)
287 2qy6_A UPF0209 protein YFCK; s 98.0 2.6E-06 9E-11 71.0 3.4 82 141-222 60-210 (257)
288 3v97_A Ribosomal RNA large sub 97.9 1.8E-05 6.2E-10 74.7 7.3 84 140-223 189-345 (703)
289 3r24_A NSP16, 2'-O-methyl tran 97.9 3.9E-05 1.3E-09 64.7 8.4 92 131-223 95-215 (344)
290 3cvo_A Methyltransferase-like 97.7 8E-05 2.7E-09 59.8 7.5 77 141-223 30-152 (202)
291 4fzv_A Putative methyltransfer 97.7 1.1E-05 3.6E-10 70.5 2.4 93 130-222 137-281 (359)
292 3s1s_A Restriction endonucleas 97.7 0.00011 3.7E-09 70.0 8.8 83 141-223 321-463 (878)
293 3ll7_A Putative methyltransfer 97.7 7.9E-06 2.7E-10 72.4 0.9 56 141-196 93-170 (410)
294 2wk1_A NOVP; transferase, O-me 97.7 9.8E-05 3.3E-09 62.2 7.4 83 140-223 105-242 (282)
295 3c6k_A Spermine synthase; sper 97.4 9.1E-05 3.1E-09 64.8 3.6 82 141-222 205-328 (381)
296 3ufb_A Type I restriction-modi 97.3 0.00058 2E-08 62.4 8.4 99 124-223 201-360 (530)
297 1wg8_A Predicted S-adenosylmet 97.3 0.00036 1.2E-08 58.7 5.6 69 129-198 11-98 (285)
298 2vz8_A Fatty acid synthase; tr 97.1 0.00042 1.4E-08 73.6 5.2 83 141-223 1240-1346(2512)
299 2zig_A TTHA0409, putative modi 96.3 0.0024 8.1E-08 53.8 3.6 32 140-171 234-268 (297)
300 3vyw_A MNMC2; tRNA wobble urid 95.8 0.0093 3.2E-07 50.7 5.0 82 141-222 96-223 (308)
301 2dph_A Formaldehyde dismutase; 95.4 0.032 1.1E-06 48.6 7.0 84 140-223 184-297 (398)
302 3tka_A Ribosomal RNA small sub 95.3 0.0077 2.6E-07 51.8 2.7 70 129-199 46-138 (347)
303 1i4w_A Mitochondrial replicati 94.8 0.034 1.1E-06 48.1 5.3 57 127-183 39-117 (353)
304 1rjd_A PPM1P, carboxy methyl t 94.6 0.096 3.3E-06 44.8 7.7 90 131-222 88-229 (334)
305 1g60_A Adenine-specific methyl 94.1 0.035 1.2E-06 45.6 3.6 44 125-170 198-244 (260)
306 1f8f_A Benzyl alcohol dehydrog 93.3 0.16 5.4E-06 43.6 6.6 79 140-223 189-287 (371)
307 1kol_A Formaldehyde dehydrogen 93.2 0.15 5.1E-06 44.2 6.2 84 140-223 184-298 (398)
308 2zig_A TTHA0409, putative modi 92.8 0.031 1E-06 46.9 1.2 52 172-223 21-95 (297)
309 3tos_A CALS11; methyltransfera 92.7 0.15 5E-06 42.2 5.2 35 188-223 181-215 (257)
310 3two_A Mannitol dehydrogenase; 92.7 0.14 4.8E-06 43.5 5.2 76 140-223 175-263 (348)
311 1pqw_A Polyketide synthase; ro 92.7 0.26 8.9E-06 38.0 6.4 77 140-223 37-135 (198)
312 1pl8_A Human sorbitol dehydrog 92.6 0.07 2.4E-06 45.6 3.2 79 140-223 170-271 (356)
313 3iht_A S-adenosyl-L-methionine 91.9 0.17 5.8E-06 38.6 4.2 82 141-222 40-144 (174)
314 1boo_A Protein (N-4 cytosine-s 91.7 0.065 2.2E-06 45.5 2.0 53 171-223 13-82 (323)
315 3s2e_A Zinc-containing alcohol 91.1 0.099 3.4E-06 44.2 2.5 79 140-223 165-261 (340)
316 4ej6_A Putative zinc-binding d 90.8 0.29 1E-05 42.0 5.3 79 140-223 181-282 (370)
317 3gms_A Putative NADPH:quinone 90.6 0.68 2.3E-05 39.0 7.3 78 140-223 143-241 (340)
318 2uyo_A Hypothetical protein ML 90.4 1.6 5.4E-05 36.8 9.3 81 143-223 104-216 (310)
319 3g7u_A Cytosine-specific methy 90.1 0.25 8.5E-06 42.9 4.1 55 143-197 3-79 (376)
320 1cdo_A Alcohol dehydrogenase; 89.6 0.31 1.1E-05 41.8 4.3 79 140-223 191-292 (374)
321 3goh_A Alcohol dehydrogenase, 89.5 0.31 1.1E-05 40.6 4.2 74 140-223 141-227 (315)
322 1e3j_A NADP(H)-dependent ketos 89.5 0.22 7.4E-06 42.4 3.2 79 140-223 167-269 (352)
323 3fpc_A NADP-dependent alcohol 89.4 0.49 1.7E-05 40.1 5.4 79 140-223 165-264 (352)
324 4b7c_A Probable oxidoreductase 89.3 0.17 5.8E-06 42.7 2.4 78 140-223 148-246 (336)
325 1v3u_A Leukotriene B4 12- hydr 89.0 0.39 1.3E-05 40.3 4.5 78 140-223 144-242 (333)
326 3uko_A Alcohol dehydrogenase c 88.8 0.41 1.4E-05 41.1 4.6 79 140-223 192-293 (378)
327 1p0f_A NADP-dependent alcohol 88.8 0.37 1.3E-05 41.2 4.3 79 140-223 190-291 (373)
328 2oo3_A Protein involved in cat 88.5 0.37 1.3E-05 40.3 3.8 92 131-223 82-196 (283)
329 2jhf_A Alcohol dehydrogenase E 88.5 0.39 1.3E-05 41.1 4.2 79 140-223 190-291 (374)
330 2fzw_A Alcohol dehydrogenase c 88.4 0.38 1.3E-05 41.1 4.1 79 140-223 189-290 (373)
331 3uog_A Alcohol dehydrogenase; 88.4 0.39 1.3E-05 41.0 4.1 78 140-223 188-285 (363)
332 1g55_A DNA cytosine methyltran 88.3 0.2 6.7E-06 42.9 2.1 56 143-198 3-77 (343)
333 1e3i_A Alcohol dehydrogenase, 88.2 0.43 1.5E-05 40.9 4.3 79 140-223 194-295 (376)
334 3jv7_A ADH-A; dehydrogenase, n 87.8 0.26 8.9E-06 41.7 2.6 80 139-223 169-268 (345)
335 2dq4_A L-threonine 3-dehydroge 87.8 0.29 9.8E-06 41.5 2.8 78 141-223 164-260 (343)
336 2hcy_A Alcohol dehydrogenase 1 87.1 0.34 1.2E-05 41.1 2.9 79 140-223 168-267 (347)
337 1rjw_A ADH-HT, alcohol dehydro 86.9 0.84 2.9E-05 38.5 5.3 79 140-223 163-259 (339)
338 1uuf_A YAHK, zinc-type alcohol 86.8 0.28 9.5E-06 42.2 2.2 78 140-223 193-286 (369)
339 2d8a_A PH0655, probable L-thre 86.2 1.4 4.8E-05 37.1 6.3 78 141-223 167-265 (348)
340 3m6i_A L-arabinitol 4-dehydrog 85.9 2.6 8.8E-05 35.7 7.9 79 140-223 178-281 (363)
341 3ps9_A TRNA 5-methylaminomethy 85.6 0.69 2.3E-05 42.9 4.4 36 187-222 177-216 (676)
342 3pvc_A TRNA 5-methylaminomethy 85.3 0.53 1.8E-05 43.9 3.4 36 187-222 169-208 (689)
343 4eye_A Probable oxidoreductase 85.3 1.2 4.1E-05 37.6 5.4 78 140-223 158-255 (342)
344 2j3h_A NADP-dependent oxidored 85.3 1.2 4E-05 37.5 5.4 78 140-223 154-253 (345)
345 2py6_A Methyltransferase FKBM; 85.1 0.59 2E-05 40.9 3.5 31 140-170 225-262 (409)
346 2b5w_A Glucose dehydrogenase; 84.4 3.4 0.00012 34.9 7.9 75 143-223 174-271 (357)
347 1yb5_A Quinone oxidoreductase; 84.1 1.6 5.6E-05 36.9 5.8 78 140-223 169-267 (351)
348 1vj0_A Alcohol dehydrogenase, 83.9 0.3 1E-05 42.1 1.0 79 140-223 194-296 (380)
349 2km1_A Protein DRE2; yeast, an 83.6 0.76 2.6E-05 34.1 3.0 40 183-222 53-95 (136)
350 4dvj_A Putative zinc-dependent 83.5 1.2 4.2E-05 37.9 4.8 78 141-223 171-268 (363)
351 1piw_A Hypothetical zinc-type 83.2 0.19 6.4E-06 42.9 -0.6 80 140-223 178-274 (360)
352 3jyn_A Quinone oxidoreductase; 83.2 1.4 4.7E-05 36.8 4.9 78 140-223 139-237 (325)
353 3qwb_A Probable quinone oxidor 82.6 1.5 5E-05 36.8 4.8 78 140-223 147-245 (334)
354 3nx4_A Putative oxidoreductase 82.4 2.9 0.0001 34.6 6.6 74 144-223 149-239 (324)
355 1eg2_A Modification methylase 82.3 0.86 2.9E-05 38.5 3.2 19 205-223 86-104 (319)
356 2c7p_A Modification methylase 82.1 1 3.4E-05 38.3 3.6 56 142-197 11-79 (327)
357 2c0c_A Zinc binding alcohol de 81.6 3 0.0001 35.4 6.5 78 139-223 161-259 (362)
358 1iz0_A Quinone oxidoreductase; 81.3 0.33 1.1E-05 40.2 0.3 78 139-223 123-216 (302)
359 4dcm_A Ribosomal RNA large sub 81.3 2.5 8.4E-05 36.4 5.8 92 130-223 27-134 (375)
360 2eih_A Alcohol dehydrogenase; 81.1 1.8 6.3E-05 36.3 4.9 78 140-223 165-263 (343)
361 1boo_A Protein (N-4 cytosine-s 81.0 1.4 4.8E-05 37.1 4.1 46 124-171 237-285 (323)
362 1tt7_A YHFP; alcohol dehydroge 80.6 1.8 6.3E-05 36.0 4.7 77 141-223 149-245 (330)
363 3fbg_A Putative arginate lyase 80.2 0.75 2.6E-05 38.9 2.2 77 141-222 150-245 (346)
364 1xa0_A Putative NADPH dependen 80.2 1.3 4.4E-05 36.9 3.6 77 141-223 148-244 (328)
365 1jvb_A NAD(H)-dependent alcoho 80.1 2.5 8.5E-05 35.6 5.4 79 140-223 169-269 (347)
366 1qor_A Quinone oxidoreductase; 79.9 2.2 7.6E-05 35.5 5.0 78 140-223 139-237 (327)
367 3ip1_A Alcohol dehydrogenase, 79.6 3.7 0.00013 35.4 6.5 80 140-223 212-316 (404)
368 4eez_A Alcohol dehydrogenase 1 79.3 5.3 0.00018 33.4 7.2 79 140-223 162-261 (348)
369 2cdc_A Glucose dehydrogenase g 78.3 3 0.0001 35.4 5.4 74 142-223 181-276 (366)
370 2cf5_A Atccad5, CAD, cinnamyl 78.0 0.65 2.2E-05 39.5 1.1 77 141-223 180-273 (357)
371 4a2c_A Galactitol-1-phosphate 77.9 6.8 0.00023 32.6 7.5 79 140-223 159-258 (346)
372 2zb4_A Prostaglandin reductase 77.9 4.7 0.00016 33.9 6.5 78 140-223 157-258 (357)
373 3krt_A Crotonyl COA reductase; 77.7 4.7 0.00016 35.4 6.6 78 140-223 227-342 (456)
374 2j8z_A Quinone oxidoreductase; 76.6 3 0.0001 35.2 4.9 78 140-223 161-259 (354)
375 1eg2_A Modification methylase 76.3 2.6 8.8E-05 35.6 4.3 31 140-170 241-274 (319)
376 2h6e_A ADH-4, D-arabinose 1-de 75.9 0.71 2.4E-05 39.0 0.7 78 141-223 170-267 (344)
377 4h0n_A DNMT2; SAH binding, tra 75.9 1.5 5.1E-05 37.3 2.7 54 143-196 4-76 (333)
378 3dmg_A Probable ribosomal RNA 75.1 1.6 5.6E-05 37.7 2.8 96 124-223 30-137 (381)
379 2hwk_A Helicase NSP2; rossman 75.0 4.2 0.00014 34.1 5.1 46 177-223 195-252 (320)
380 3qv2_A 5-cytosine DNA methyltr 73.8 2.1 7.2E-05 36.3 3.1 55 141-196 9-83 (327)
381 4dup_A Quinone oxidoreductase; 73.4 0.87 3E-05 38.6 0.6 78 140-223 166-263 (353)
382 3ius_A Uncharacterized conserv 71.4 21 0.00072 28.3 8.7 56 143-202 6-76 (286)
383 3ubt_Y Modification methylase 71.1 4.6 0.00016 33.6 4.6 54 143-196 1-68 (331)
384 1wly_A CAAR, 2-haloacrylate re 69.6 5 0.00017 33.4 4.6 78 140-223 144-242 (333)
385 4a0s_A Octenoyl-COA reductase/ 69.2 10 0.00035 33.0 6.6 78 140-223 219-334 (447)
386 2qrv_A DNA (cytosine-5)-methyl 68.1 2.8 9.5E-05 35.0 2.6 56 141-196 15-90 (295)
387 3tqh_A Quinone oxidoreductase; 66.5 7.2 0.00025 32.2 4.9 77 140-223 151-243 (321)
388 3gaz_A Alcohol dehydrogenase s 66.4 4.5 0.00015 34.0 3.6 76 140-223 149-244 (343)
389 1yqd_A Sinapyl alcohol dehydro 66.1 1.6 5.5E-05 37.2 0.7 77 141-223 187-280 (366)
390 3gqv_A Enoyl reductase; medium 65.6 17 0.00057 30.8 7.1 78 140-223 163-261 (371)
391 1ej6_A Lambda2; icosahedral, n 64.8 13 0.00045 36.6 6.7 79 141-219 821-918 (1289)
392 3pi7_A NADH oxidoreductase; gr 64.2 4.6 0.00016 33.9 3.2 75 143-223 166-261 (349)
393 4f3n_A Uncharacterized ACR, CO 60.4 13 0.00043 32.8 5.4 29 142-170 138-176 (432)
394 3iei_A Leucine carboxyl methyl 60.4 69 0.0024 26.9 9.9 91 131-222 80-226 (334)
395 4dio_A NAD(P) transhydrogenase 59.1 9.6 0.00033 33.3 4.4 82 141-222 189-309 (405)
396 1l7d_A Nicotinamide nucleotide 56.1 5.2 0.00018 34.4 2.2 31 141-171 171-206 (384)
397 1zsy_A Mitochondrial 2-enoyl t 55.4 54 0.0018 27.3 8.5 29 189-223 240-268 (357)
398 3me5_A Cytosine-specific methy 55.4 7.2 0.00024 34.9 3.0 42 142-183 88-146 (482)
399 4e2x_A TCAB9; kijanose, tetron 54.5 82 0.0028 26.6 9.7 76 141-223 318-408 (416)
400 3slk_A Polyketide synthase ext 54.0 11 0.00037 35.8 4.2 77 140-223 344-440 (795)
401 3fwz_A Inner membrane protein 53.4 25 0.00087 25.0 5.4 78 143-222 8-102 (140)
402 3iyl_W VP1; non-enveloped viru 52.8 13 0.00045 36.8 4.4 80 141-220 827-926 (1299)
403 2vn8_A Reticulon-4-interacting 52.1 7.9 0.00027 32.8 2.7 79 140-223 182-278 (375)
404 3llv_A Exopolyphosphatase-rela 49.7 23 0.00078 25.0 4.6 56 143-198 7-79 (141)
405 4e4y_A Short chain dehydrogena 49.4 54 0.0019 25.4 7.2 59 142-200 4-81 (244)
406 3ce6_A Adenosylhomocysteinase; 49.2 12 0.0004 33.6 3.4 74 141-222 273-358 (494)
407 3p2y_A Alanine dehydrogenase/p 48.5 8.3 0.00028 33.4 2.2 82 141-222 183-299 (381)
408 3trk_A Nonstructural polyprote 48.0 8.3 0.00028 32.0 2.0 37 187-223 209-257 (324)
409 4eso_A Putative oxidoreductase 47.8 19 0.00066 28.5 4.3 82 141-222 7-135 (255)
410 3pxx_A Carveol dehydrogenase; 47.7 39 0.0013 26.8 6.2 82 141-222 9-150 (287)
411 4g9j_C Synthetic peptide, seri 46.4 3.3 0.00011 20.7 -0.4 10 7-16 2-11 (26)
412 4gua_A Non-structural polyprot 46.3 48 0.0016 30.4 6.8 40 183-223 216-267 (670)
413 4a27_A Synaptic vesicle membra 45.6 15 0.0005 30.8 3.3 76 140-223 141-236 (349)
414 3ijr_A Oxidoreductase, short c 45.2 63 0.0022 26.0 7.1 82 141-222 46-179 (291)
415 2vhw_A Alanine dehydrogenase; 45.1 3.9 0.00013 35.1 -0.4 82 141-222 167-265 (377)
416 3is3_A 17BETA-hydroxysteroid d 43.8 42 0.0014 26.6 5.8 83 141-223 17-150 (270)
417 3v2g_A 3-oxoacyl-[acyl-carrier 43.7 47 0.0016 26.5 6.0 83 141-223 30-163 (271)
418 3h2s_A Putative NADH-flavin re 43.5 60 0.002 24.4 6.4 78 144-222 2-101 (224)
419 3ggo_A Prephenate dehydrogenas 43.5 81 0.0028 26.0 7.6 77 142-222 33-125 (314)
420 3ek2_A Enoyl-(acyl-carrier-pro 43.3 57 0.002 25.5 6.5 60 141-200 13-103 (271)
421 1zkd_A DUF185; NESG, RPR58, st 43.2 13 0.00043 32.3 2.6 30 141-170 80-121 (387)
422 3ew7_A LMO0794 protein; Q8Y8U8 42.8 97 0.0033 23.0 7.5 56 144-200 2-72 (221)
423 2pk3_A GDP-6-deoxy-D-LYXO-4-he 42.5 23 0.00078 28.6 4.0 60 141-201 11-86 (321)
424 1x13_A NAD(P) transhydrogenase 41.6 6.3 0.00021 34.2 0.4 31 141-171 171-206 (401)
425 1g60_A Adenine-specific methyl 41.1 8.8 0.0003 30.9 1.2 19 205-223 54-72 (260)
426 3oig_A Enoyl-[acyl-carrier-pro 41.1 65 0.0022 25.2 6.5 83 141-223 6-145 (266)
427 4f6c_A AUSA reductase domain p 41.0 1E+02 0.0034 26.1 8.1 59 142-201 69-162 (427)
428 1y1p_A ARII, aldehyde reductas 40.2 1.3E+02 0.0044 24.1 8.4 61 141-202 10-96 (342)
429 4fgs_A Probable dehydrogenase 38.6 35 0.0012 27.8 4.5 82 141-222 28-156 (273)
430 3l9w_A Glutathione-regulated p 38.4 49 0.0017 28.6 5.6 79 142-222 4-99 (413)
431 2h7i_A Enoyl-[acyl-carrier-pro 37.9 46 0.0016 26.3 5.1 60 141-200 6-98 (269)
432 3orf_A Dihydropteridine reduct 37.1 1.3E+02 0.0045 23.3 7.7 58 142-199 22-97 (251)
433 2eez_A Alanine dehydrogenase; 36.3 5.9 0.0002 33.8 -0.6 82 141-222 165-263 (369)
434 3gvx_A Glycerate dehydrogenase 35.7 14 0.00049 30.5 1.7 81 141-222 121-206 (290)
435 3e8x_A Putative NAD-dependent 35.7 1.4E+02 0.0047 22.6 7.5 61 141-201 20-96 (236)
436 3ko8_A NAD-dependent epimerase 34.6 1.6E+02 0.0053 23.3 7.9 55 144-200 2-73 (312)
437 3i6i_A Putative leucoanthocyan 34.6 50 0.0017 27.0 4.9 59 143-202 11-96 (346)
438 1qsg_A Enoyl-[acyl-carrier-pro 33.9 1.7E+02 0.0057 22.8 8.2 60 141-200 8-98 (265)
439 1pjc_A Protein (L-alanine dehy 32.6 7.5 0.00026 33.1 -0.6 82 141-222 166-264 (361)
440 1lss_A TRK system potassium up 32.3 1.2E+02 0.004 20.6 7.1 77 142-220 4-98 (140)
441 2pv7_A T-protein [includes: ch 31.9 45 0.0016 27.1 4.2 69 143-222 22-96 (298)
442 2zwa_A Leucine carboxyl methyl 31.9 1.3E+02 0.0045 27.6 7.7 49 172-222 189-251 (695)
443 3ksu_A 3-oxoacyl-acyl carrier 31.6 63 0.0021 25.5 4.9 60 141-200 10-102 (262)
444 3c24_A Putative oxidoreductase 31.1 29 0.001 27.9 2.8 78 143-222 12-98 (286)
445 3u5t_A 3-oxoacyl-[acyl-carrier 30.6 68 0.0023 25.4 5.0 82 141-222 26-158 (267)
446 3r3s_A Oxidoreductase; structu 30.4 74 0.0025 25.6 5.2 83 141-223 48-183 (294)
447 1wg8_A Predicted S-adenosylmet 30.2 17 0.00058 30.2 1.2 20 204-223 212-231 (285)
448 4id9_A Short-chain dehydrogena 30.2 78 0.0027 25.7 5.4 61 141-202 18-90 (347)
449 4e21_A 6-phosphogluconate dehy 29.9 39 0.0013 28.6 3.5 79 142-222 22-112 (358)
450 3ruf_A WBGU; rossmann fold, UD 29.7 88 0.003 25.4 5.7 60 141-201 24-112 (351)
451 1ks9_A KPA reductase;, 2-dehyd 29.7 65 0.0022 25.4 4.7 77 144-222 2-94 (291)
452 4f6l_B AUSA reductase domain p 29.7 1.1E+02 0.0037 26.7 6.5 57 143-200 151-242 (508)
453 3k31_A Enoyl-(acyl-carrier-pro 29.6 1.4E+02 0.0047 24.0 6.8 83 141-223 29-166 (296)
454 1id1_A Putative potassium chan 29.5 1.5E+02 0.0051 20.9 6.4 79 142-222 3-102 (153)
455 3swr_A DNA (cytosine-5)-methyl 29.1 28 0.00097 34.0 2.7 30 141-170 539-573 (1002)
456 3dqp_A Oxidoreductase YLBE; al 28.9 95 0.0032 23.3 5.4 56 144-200 2-74 (219)
457 3tka_A Ribosomal RNA small sub 28.8 18 0.00063 30.8 1.2 19 205-223 254-272 (347)
458 2vz8_A Fatty acid synthase; tr 28.7 27 0.00092 37.6 2.7 77 140-222 1666-1767(2512)
459 3ond_A Adenosylhomocysteinase; 28.5 90 0.0031 27.8 5.7 73 141-222 264-349 (488)
460 3gpi_A NAD-dependent epimerase 28.4 1.2E+02 0.0042 23.7 6.2 55 143-199 4-73 (286)
461 3edm_A Short chain dehydrogena 27.6 1.1E+02 0.0038 23.9 5.7 59 141-199 7-96 (259)
462 1dhr_A Dihydropteridine reduct 27.2 60 0.002 25.1 4.0 60 141-200 6-87 (241)
463 3vps_A TUNA, NAD-dependent epi 27.0 68 0.0023 25.5 4.4 52 142-201 7-81 (321)
464 4a7p_A UDP-glucose dehydrogena 26.8 54 0.0019 28.7 3.9 82 141-222 7-126 (446)
465 2raf_A Putative dinucleotide-b 26.6 1.1E+02 0.0038 23.3 5.4 64 141-221 18-86 (209)
466 3evt_A Phosphoglycerate dehydr 26.0 21 0.00071 30.0 1.0 75 141-222 136-224 (324)
467 2cuk_A Glycerate dehydrogenase 26.0 30 0.001 28.7 2.1 78 141-222 143-226 (311)
468 4hp8_A 2-deoxy-D-gluconate 3-d 25.5 2E+02 0.0068 22.9 6.9 61 141-201 8-91 (247)
469 2rir_A Dipicolinate synthase, 24.9 41 0.0014 27.4 2.7 77 141-222 156-243 (300)
470 1g0o_A Trihydroxynaphthalene r 24.9 1.1E+02 0.0038 24.2 5.3 82 141-222 28-160 (283)
471 3oh8_A Nucleoside-diphosphate 24.9 1.8E+02 0.0062 25.4 7.1 58 142-200 147-212 (516)
472 3g2e_A OORC subunit of 2-oxogl 24.5 74 0.0025 24.3 3.9 29 188-223 69-97 (194)
473 2b69_A UDP-glucuronate decarbo 23.7 2.2E+02 0.0074 22.9 7.0 57 141-200 26-102 (343)
474 2pd4_A Enoyl-[acyl-carrier-pro 23.4 1.7E+02 0.0058 23.0 6.1 60 141-200 5-95 (275)
475 3gvp_A Adenosylhomocysteinase 23.1 1.9E+02 0.0067 25.3 6.7 74 141-222 219-304 (435)
476 3ojo_A CAP5O; rossmann fold, c 22.9 54 0.0018 28.7 3.1 34 189-222 83-126 (431)
477 3l4b_C TRKA K+ channel protien 22.5 1.6E+02 0.0055 22.2 5.6 75 144-222 2-96 (218)
478 1ooe_A Dihydropteridine reduct 22.2 82 0.0028 24.1 3.9 59 142-200 3-83 (236)
479 3grk_A Enoyl-(acyl-carrier-pro 22.2 2.1E+02 0.0073 22.7 6.6 82 141-222 30-166 (293)
480 3c85_A Putative glutathione-re 22.0 2.3E+02 0.0079 20.5 7.4 79 142-222 39-136 (183)
481 3k7p_A Ribose 5-phosphate isom 21.9 27 0.00093 26.9 0.9 13 148-160 87-99 (179)
482 3rft_A Uronate dehydrogenase; 21.9 1.8E+02 0.006 22.7 5.9 63 143-205 4-81 (267)
483 3i83_A 2-dehydropantoate 2-red 21.9 1.7E+02 0.0057 23.8 5.9 78 143-222 3-102 (320)
484 1m6y_A S-adenosyl-methyltransf 21.5 26 0.00089 29.0 0.7 19 205-223 225-243 (301)
485 3g17_A Similar to 2-dehydropan 21.4 76 0.0026 25.6 3.6 78 143-222 3-93 (294)
486 3abi_A Putative uncharacterize 21.3 57 0.002 27.3 2.9 58 141-198 15-86 (365)
487 3mag_A VP39; methylated adenin 21.3 1E+02 0.0034 25.8 4.2 30 141-170 60-98 (307)
488 3d4o_A Dipicolinate synthase s 21.3 69 0.0024 25.9 3.4 77 141-222 154-241 (293)
489 4hy3_A Phosphoglycerate oxidor 21.0 14 0.00049 31.6 -1.0 79 141-222 175-263 (365)
490 1gu7_A Enoyl-[acyl-carrier-pro 20.9 1.1E+02 0.0037 25.3 4.6 30 188-223 244-273 (364)
491 4egb_A DTDP-glucose 4,6-dehydr 20.6 47 0.0016 27.1 2.2 60 141-201 23-110 (346)
492 2hmt_A YUAA protein; RCK, KTN, 20.4 1.3E+02 0.0045 20.4 4.4 76 142-218 6-98 (144)
493 2v6g_A Progesterone 5-beta-red 20.3 2.2E+02 0.0074 23.0 6.3 61 143-204 2-87 (364)
494 2g76_A 3-PGDH, D-3-phosphoglyc 20.3 22 0.00074 30.0 0.0 78 141-222 164-252 (335)
495 1qp8_A Formate dehydrogenase; 20.2 75 0.0026 26.1 3.3 77 141-222 123-207 (303)
496 1wma_A Carbonyl reductase [NAD 20.1 82 0.0028 24.4 3.5 60 141-200 3-93 (276)
No 1
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=170.73 Aligned_cols=149 Identities=52% Similarity=0.922 Sum_probs=134.8
Q ss_pred HHchhcccccccccccccccCchHHHHHhhcChHHHHHHHHhHHhhhccCCCchHHHHHHHHhccCCCCeEEEECCcchH
Q 027441 75 MRARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDAR 154 (223)
Q Consensus 75 ~~~~~~~~~fr~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~ 154 (223)
|+..+.+++|+++++..+.........+|...+..|+.+...|......|+....+.++..+....++.+|||||||+|.
T Consensus 1 m~~~~~~~~fr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~ 80 (215)
T 2zfu_A 1 MAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCR 80 (215)
T ss_dssp -CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCH
T ss_pred ChhHHHHHHHHHhcccccchHHHHHHHHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCH
Confidence 34456778899999999988888888999999999999998888888789998888889988766577899999999999
Q ss_pred HHHHhcCceEEEecCCCCCcEEEccCCCCCCCCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 155 LAKSVKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 155 ~a~~la~~v~gvDis~~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
++..++.+|+|+|+++.++.+..+|+..+|+++++||+|++..++||.++..++.++.++|+|||.|+|
T Consensus 81 ~~~~l~~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i 149 (215)
T 2zfu_A 81 LASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKV 149 (215)
T ss_dssp HHHHCCSCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHhhccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEE
Confidence 999999999999999999999999999999999999999999999877999999999999999999985
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.84 E-value=3.5e-21 Score=161.73 Aligned_cols=92 Identities=21% Similarity=0.341 Sum_probs=80.7
Q ss_pred HHHHHhcc-CCCCeEEEECCcchHHHHHhc---CceEEEecCC---------CCCcEEEccCCCCCCCCCceeEEEEccc
Q 027441 132 IVKWLKDH-SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (223)
Q Consensus 132 i~~~l~~~-~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~ 198 (223)
++++|... +...+|||||||+|.++..|+ .+|+|+|+|+ .++.+.++|++++|+++++||+|++..+
T Consensus 29 l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~ 108 (257)
T 4hg2_A 29 LFRWLGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQA 108 (257)
T ss_dssp HHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSC
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeee
Confidence 34444332 345799999999999999998 5899999997 5788999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||++++.++.++.|+|||||.|++
T Consensus 109 ~h~~~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 109 MHWFDLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp CTTCCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhHhhHHHHHHHHHHHcCCCCEEEE
Confidence 9999999999999999999999875
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.77 E-value=1.1e-18 Score=145.17 Aligned_cols=109 Identities=19% Similarity=0.281 Sum_probs=86.1
Q ss_pred HHhHHhhhccCCCchHHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcE
Q 027441 114 HSGYQEQMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSV 175 (223)
Q Consensus 114 ~~~~~~~~~~~p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~ 175 (223)
+.+|......++...+..+++.+... ++.+|||||||+|.++..++ .+|+|+|+|+ .++.+
T Consensus 11 ~~~~~~s~~~~~~~~~~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~ 89 (260)
T 1vl5_A 11 HHMYVTSQIHAKGSDLAKLMQIAALK-GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEY 89 (260)
T ss_dssp ------------CCCHHHHHHHHTCC-SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEE
T ss_pred ceeeecCccccCHHHHHHHHHHhCCC-CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEE
Confidence 44555555555666667888887655 77899999999999999887 5899999996 35789
Q ss_pred EEccCCCCCCCCCceeEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 176 IACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 176 ~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+.+|+..+|+++++||+|++..+++|+ |+..+|.++.|+|+|||.|+|
T Consensus 90 ~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 90 VQGDAEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp EECCC-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEecHHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEE
Confidence 999999999999999999999999999 999999999999999999975
No 4
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.72 E-value=2.7e-17 Score=132.58 Aligned_cols=94 Identities=11% Similarity=0.164 Sum_probs=82.2
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC-----------CCCcEEEccCCCCCCCCCceeEEE
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-----------NDPSVIACDMSNTPLNSSSVDVAV 194 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-----------~~~~~~~~d~~~lp~~~~sfD~Vi 194 (223)
...++..+....++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+ +++++||+|+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~ 112 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVF 112 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEE
Confidence 45677777766577899999999999998887 5899999997 4678999999888 7789999999
Q ss_pred EcccccCCCH---HHHHHHHHHccCCCCEEEc
Q 027441 195 FCLSLMGINF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 195 ~~~~l~~~d~---~~~l~e~~rvLkpgG~lvi 223 (223)
+..+++|++. ..+|.++.++|+|||.|+|
T Consensus 113 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 113 FAHWLAHVPDDRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 9999999943 7999999999999999975
No 5
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.71 E-value=1.4e-17 Score=137.84 Aligned_cols=93 Identities=22% Similarity=0.327 Sum_probs=81.0
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCce
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSV 190 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sf 190 (223)
.++..+....++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|+++++|
T Consensus 36 ~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 115 (257)
T 3f4k_A 36 KAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEEL 115 (257)
T ss_dssp HHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCE
T ss_pred HHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCE
Confidence 344444444567899999999999998887 3899999997 23789999999999999999
Q ss_pred eEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 191 DVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 191 D~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
|+|++..+++|+++..++.++.++|+|||.|+|
T Consensus 116 D~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~ 148 (257)
T 3f4k_A 116 DLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAV 148 (257)
T ss_dssp EEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEecChHhhcCHHHHHHHHHHHcCCCcEEEE
Confidence 999999999999999999999999999999985
No 6
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.71 E-value=2.5e-17 Score=133.30 Aligned_cols=92 Identities=14% Similarity=0.218 Sum_probs=80.2
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC----------C-CCcEEEccCCCCCCCCCceeEEEE
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------N-DPSVIACDMSNTPLNSSSVDVAVF 195 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------~-~~~~~~~d~~~lp~~~~sfD~Vi~ 195 (223)
..+++.+... ++.+|||||||+|.++..++ .+|+|+|+++ . ++.++.+|+..+|++ ++||+|++
T Consensus 35 ~~~l~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~ 112 (220)
T 3hnr_A 35 EDILEDVVNK-SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVS 112 (220)
T ss_dssp HHHHHHHHHT-CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEE
T ss_pred HHHHHHhhcc-CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEE
Confidence 4566666655 67899999999999999887 5799999997 2 789999999999988 99999999
Q ss_pred cccccCC-CHHH--HHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGI-NFPN--YLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~-d~~~--~l~e~~rvLkpgG~lvi 223 (223)
..+++|+ ++.. +|.++.++|+|||.|+|
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEE
Confidence 9999999 4444 99999999999999985
No 7
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.71 E-value=1.6e-17 Score=136.15 Aligned_cols=93 Identities=12% Similarity=0.115 Sum_probs=81.1
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCCC-----------CCcEEEccCCCCCCCCCceeEEEE
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN-----------DPSVIACDMSNTPLNSSSVDVAVF 195 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~~-----------~~~~~~~d~~~lp~~~~sfD~Vi~ 195 (223)
..+++.+....++.+|||||||+|.++..++ .+|+|+|+++. ++.++.+|+..+ +++++||+|++
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~ 109 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVL 109 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEE
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEE
Confidence 4566666655567899999999999999987 47999999972 788999999887 46789999999
Q ss_pred cccccCC-CHHHHHHHHH-HccCCCCEEEc
Q 027441 196 CLSLMGI-NFPNYLQEAQ-RVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~-d~~~~l~e~~-rvLkpgG~lvi 223 (223)
..+++|+ ++..+|.++. |+|+|||.|+|
T Consensus 110 ~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 110 THVLEHIDDPVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp ESCGGGCSSHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhHHHhhcCHHHHHHHHHHHhcCCCCEEEE
Confidence 9999999 8999999999 99999999985
No 8
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.71 E-value=2.8e-17 Score=138.17 Aligned_cols=82 Identities=21% Similarity=0.343 Sum_probs=71.4
Q ss_pred CCCCeEEEECCcchHHHHHhc-------CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEc
Q 027441 140 SPSLVIADFGCGDARLAKSVK-------NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-------~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~ 196 (223)
.++.+|||||||+|.++..|+ .+|+|+|+|+ .++.++++|+.++|++ .||+|++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~ 146 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLN 146 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceee
Confidence 478999999999999888876 2799999996 3678999999999874 59999999
Q ss_pred ccccCCCH---HHHHHHHHHccCCCCEEEc
Q 027441 197 LSLMGINF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~l~~~d~---~~~l~e~~rvLkpgG~lvi 223 (223)
+++||+++ ..+|.+++|+|+|||.|+|
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii 176 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVL 176 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEE
Confidence 99999943 4789999999999999985
No 9
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=1.6e-17 Score=133.11 Aligned_cols=91 Identities=14% Similarity=0.230 Sum_probs=79.6
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC----------CCCcEEEccCCCCCCCCCceeEEEEcc
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------~~~~~~~~d~~~lp~~~~sfD~Vi~~~ 197 (223)
.+..++.. .+.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|+++++||+|++..
T Consensus 33 ~l~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 110 (203)
T 3h2b_A 33 LIEPWATG--VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWY 110 (203)
T ss_dssp HHHHHHHH--CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEES
T ss_pred HHHHHhcc--CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehh
Confidence 34444433 37899999999999999887 4799999997 478899999999999899999999999
Q ss_pred cccCC---CHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+++|+ ++..+|.++.++|+|||.|+|
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 111 SLIHMGPGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp SSTTCCTTTHHHHHHHHHHTEEEEEEEEE
T ss_pred hHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 99999 788999999999999999985
No 10
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.71 E-value=3.2e-17 Score=137.01 Aligned_cols=92 Identities=23% Similarity=0.372 Sum_probs=80.5
Q ss_pred HHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCcee
Q 027441 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVD 191 (223)
Q Consensus 132 i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD 191 (223)
++..+....++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|+++++||
T Consensus 37 ~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 116 (267)
T 3kkz_A 37 ALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELD 116 (267)
T ss_dssp HHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEE
T ss_pred HHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEE
Confidence 34444433467899999999999999887 3899999996 348899999999999999999
Q ss_pred EEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|++..+++|+++..++.++.++|+|||.|+|
T Consensus 117 ~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 117 LIWSEGAIYNIGFERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp EEEESSCGGGTCHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEcCCceecCHHHHHHHHHHHcCCCCEEEE
Confidence 99999999999999999999999999999985
No 11
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.71 E-value=3.4e-17 Score=134.29 Aligned_cols=83 Identities=28% Similarity=0.334 Sum_probs=76.8
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC------------CCCcEEEccCCCCCCCCCceeEEEEcccccCC-CH
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NF 204 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d~ 204 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|+++++||+|++..+++|+ ++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 132 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEP 132 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCH
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhccCH
Confidence 67899999999999999887 5799999996 46789999999999999999999999999999 88
Q ss_pred HHHHHHHHHccCCCCEEEc
Q 027441 205 PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 205 ~~~l~e~~rvLkpgG~lvi 223 (223)
..++.++.++|+|||.|+|
T Consensus 133 ~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 133 LRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEE
Confidence 9999999999999999985
No 12
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.70 E-value=5.2e-17 Score=134.62 Aligned_cols=94 Identities=24% Similarity=0.342 Sum_probs=81.3
Q ss_pred HHHHHHHh----ccCCCCeEEEECCcchHHHHHhc---CceEEEecCC--------------CCCcEEEccCCCCCCCCC
Q 027441 130 NIIVKWLK----DHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 130 ~~i~~~l~----~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~ 188 (223)
..+.+.+. ...++.+|||||||+|.++..++ .+|+|+|+|+ .++.+..+|+..+|++++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 103 (263)
T 2yqz_A 24 GQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDE 103 (263)
T ss_dssp HHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTT
T ss_pred HHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCC
Confidence 44555552 23467899999999999998887 5799999996 367889999999999999
Q ss_pred ceeEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++..++||+ ++..++.++.++|+|||.|++
T Consensus 104 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (263)
T 2yqz_A 104 SVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLE 139 (263)
T ss_dssp CEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEE
Confidence 99999999999999 999999999999999999975
No 13
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=1.7e-17 Score=138.52 Aligned_cols=93 Identities=24% Similarity=0.307 Sum_probs=80.9
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------CCCcEEEccCCCCCCCCCceeEEEEc
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------~~~~~~~~d~~~lp~~~~sfD~Vi~~ 196 (223)
.+.+.+.+.. .++.+|||||||+|.++..++ .+|+|+|+|+ .++.++.+|+..+|+++++||+|++.
T Consensus 23 ~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 101 (261)
T 3ege_A 23 VNAIINLLNL-PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISI 101 (261)
T ss_dssp HHHHHHHHCC-CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEE
T ss_pred HHHHHHHhCC-CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEc
Confidence 3455555543 367899999999999999987 5899999997 36789999999999999999999999
Q ss_pred ccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 197 LSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
.+++|+ ++..++.++.++|+ ||.++|
T Consensus 102 ~~l~~~~~~~~~l~~~~~~Lk-gG~~~~ 128 (261)
T 3ege_A 102 LAIHHFSHLEKSFQEMQRIIR-DGTIVL 128 (261)
T ss_dssp SCGGGCSSHHHHHHHHHHHBC-SSCEEE
T ss_pred chHhhccCHHHHHHHHHHHhC-CcEEEE
Confidence 999999 99999999999999 997664
No 14
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.69 E-value=3.2e-17 Score=131.83 Aligned_cols=91 Identities=20% Similarity=0.279 Sum_probs=78.2
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCce
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSV 190 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sf 190 (223)
.+++.+... + .+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|+++++|
T Consensus 35 ~~~~~~~~~-~-~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 112 (219)
T 3dlc_A 35 NIINRFGIT-A-GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYA 112 (219)
T ss_dssp HHHHHHCCC-E-EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCE
T ss_pred HHHHhcCCC-C-CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccc
Confidence 444444322 3 399999999999988886 3799999996 35789999999999999999
Q ss_pred eEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 191 DVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 191 D~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
|+|++..+++|+ ++..++.++.++|+|||.|+|
T Consensus 113 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 113 DLIVSRGSVFFWEDVATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred cEEEECchHhhccCHHHHHHHHHHhCCCCCEEEE
Confidence 999999999999 999999999999999999875
No 15
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.69 E-value=1.1e-17 Score=138.57 Aligned_cols=83 Identities=19% Similarity=0.243 Sum_probs=76.7
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC------------CCCcEEEccCCCCCCCCCceeEEEEcccccCC-C
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-N 203 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d 203 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|+++++||+|++..+++|+ +
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 123 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIAS 123 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhh
Confidence 67899999999999998887 3899999996 46789999999999989999999999999999 9
Q ss_pred HHHHHHHHHHccCCCCEEEc
Q 027441 204 FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lvi 223 (223)
+..+|.++.++|+|||.|+|
T Consensus 124 ~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 124 FDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp HHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEE
Confidence 99999999999999999985
No 16
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.69 E-value=8.1e-17 Score=132.66 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=81.1
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeE
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDV 192 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~ 192 (223)
.+++.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+|+..+|+++++||+
T Consensus 12 ~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 90 (239)
T 1xxl_A 12 LMIKTAECR-AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDI 90 (239)
T ss_dssp HHHHHHTCC-TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEE
T ss_pred hHHHHhCcC-CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEE
Confidence 344555544 78999999999999999887 5799999996 3578899999999999999999
Q ss_pred EEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
|++..+++|+ ++..++.++.++|+|||.|+|
T Consensus 91 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 91 ITCRYAAHHFSDVRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEECCchhhccCHHHHHHHHHHHcCCCcEEEE
Confidence 9999999999 999999999999999999975
No 17
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.68 E-value=9.8e-17 Score=135.89 Aligned_cols=94 Identities=20% Similarity=0.193 Sum_probs=82.0
Q ss_pred HHHHHHHh---ccCCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCC
Q 027441 130 NIIVKWLK---DHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLN 186 (223)
Q Consensus 130 ~~i~~~l~---~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~ 186 (223)
+.++..+. ...++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 147 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCE 147 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSC
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCC
Confidence 45666661 33477899999999999988876 4899999996 3578999999999999
Q ss_pred CCceeEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 187 SSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 187 ~~sfD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+++||+|++..+++|+ ++..+|.++.|+|+|||.|+|
T Consensus 148 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 148 DNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEE
Confidence 9999999999999999 899999999999999999985
No 18
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=6.5e-17 Score=136.08 Aligned_cols=92 Identities=18% Similarity=0.270 Sum_probs=81.1
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC----------CCCcEEEccCCCCCCCCCceeEEEEc
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------~~~~~~~~d~~~lp~~~~sfD~Vi~~ 196 (223)
+.+++.+... ++.+|||||||+|.++..++ .+|+|+|+|+ .++.+..+|+..+|+ +++||+|++.
T Consensus 47 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~ 124 (279)
T 3ccf_A 47 EDLLQLLNPQ-PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSN 124 (279)
T ss_dssp CHHHHHHCCC-TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEE
T ss_pred HHHHHHhCCC-CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEc
Confidence 4566666543 67899999999999998887 5899999997 478899999999997 5899999999
Q ss_pred ccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 197 LSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
.+++|+ ++..++.++.++|+|||.|+|
T Consensus 125 ~~l~~~~d~~~~l~~~~~~LkpgG~l~~ 152 (279)
T 3ccf_A 125 AMLHWVKEPEAAIASIHQALKSGGRFVA 152 (279)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhhCcCHHHHHHHHHHhcCCCcEEEE
Confidence 999998 999999999999999999975
No 19
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.68 E-value=2.3e-17 Score=135.77 Aligned_cols=90 Identities=14% Similarity=0.183 Sum_probs=76.6
Q ss_pred HHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC-------CCCcEEEccCCCC--CCCCCceeEEEEcccccC
Q 027441 134 KWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------NDPSVIACDMSNT--PLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 134 ~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-------~~~~~~~~d~~~l--p~~~~sfD~Vi~~~~l~~ 201 (223)
..+....++.+|||||||+|.++..++ .+|+|+|+|+ .++.++.+|+..+ |+++++||+|++..+++|
T Consensus 34 ~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~ 113 (240)
T 3dli_A 34 RYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHFVEH 113 (240)
T ss_dssp GGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESCGGG
T ss_pred HHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCchhh
Confidence 334444467899999999999998887 4799999997 4577888888775 888999999999999999
Q ss_pred C---CHHHHHHHHHHccCCCCEEEc
Q 027441 202 I---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ +...++.++.++|+|||.|+|
T Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCTTCCEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCcEEEE
Confidence 9 347999999999999999985
No 20
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.68 E-value=7.1e-17 Score=133.56 Aligned_cols=92 Identities=21% Similarity=0.185 Sum_probs=79.5
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCc
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSS 189 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~s 189 (223)
..++..+.. .++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+|+..+++ +++
T Consensus 26 ~~l~~~~~~-~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 103 (256)
T 1nkv_A 26 ATLGRVLRM-KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEK 103 (256)
T ss_dssp HHHHHHTCC-CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSC
T ss_pred HHHHHhcCC-CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCC
Confidence 445555443 377899999999999888776 4899999996 358899999999988 889
Q ss_pred eeEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
||+|++..+++|+ ++..+|.++.++|+|||.|+|
T Consensus 104 fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 104 CDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEE
T ss_pred CCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEE
Confidence 9999999999999 899999999999999999985
No 21
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.68 E-value=1.1e-16 Score=133.75 Aligned_cols=83 Identities=25% Similarity=0.336 Sum_probs=76.2
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEccccc
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~ 200 (223)
++.+|||||||+|.++..++ .+|+|+|+|+ .++.+..+|+..+|+++++||+|++..+++
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 140 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLH 140 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhh
Confidence 67899999999999988876 4899999996 257899999999999999999999999999
Q ss_pred CC-CHHHHHHHHHHccCCCCEEEc
Q 027441 201 GI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
|+ ++..+|.++.++|+|||.|+|
T Consensus 141 ~~~~~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 141 HMPDRGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp TSSCHHHHHHHHHTTEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHcCCCeEEEE
Confidence 99 899999999999999999985
No 22
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.67 E-value=1.4e-16 Score=136.34 Aligned_cols=93 Identities=22% Similarity=0.346 Sum_probs=81.1
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCce
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSV 190 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sf 190 (223)
.+++.+....++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|+++++|
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 186 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAV 186 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCE
T ss_pred HHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCE
Confidence 344444433467899999999999988876 4799999996 25889999999999999999
Q ss_pred eEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 191 DVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 191 D~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
|+|++..+++|+++..+|.++.++|+|||.|+|
T Consensus 187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEE
Confidence 999999999999999999999999999999985
No 23
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.67 E-value=4.1e-17 Score=131.73 Aligned_cols=81 Identities=10% Similarity=0.106 Sum_probs=71.2
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC----------C-----------------CCcEEEccCCCCCCCC-Cc
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------N-----------------DPSVIACDMSNTPLNS-SS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------~-----------------~~~~~~~d~~~lp~~~-~s 189 (223)
++.+|||+|||+|..+..|+ .+|+|+|+|+ . ++.++++|+..+|+.+ ++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~ 101 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGH 101 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHS
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCC
Confidence 67899999999999999887 4899999996 1 4678999999999875 89
Q ss_pred eeEEEEcccccCCCH---HHHHHHHHHccCCCCEE
Q 027441 190 VDVAVFCLSLMGINF---PNYLQEAQRVLKPRGEE 221 (223)
Q Consensus 190 fD~Vi~~~~l~~~d~---~~~l~e~~rvLkpgG~l 221 (223)
||+|++..+++|++. ..++.++.|+|+|||.+
T Consensus 102 fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~ 136 (203)
T 1pjz_A 102 CAAFYDRAAMIALPADMRERYVQHLEALMPQACSG 136 (203)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEE
T ss_pred EEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEE
Confidence 999999999999843 47999999999999983
No 24
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.67 E-value=6.1e-17 Score=130.99 Aligned_cols=93 Identities=20% Similarity=0.356 Sum_probs=81.7
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CCCcEEEccCCCCCCCCC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~ 188 (223)
..++..+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++++++
T Consensus 27 ~~~~~~~~~~-~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 27 EKVLKEFGLK-EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHHHTCC-TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSS
T ss_pred HHHHHHhCCC-CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCC
Confidence 4566666544 67899999999999888775 4799999996 368899999999999999
Q ss_pred ceeEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++..+++|+ ++..++.++.++|+|||.|+|
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEE
Confidence 99999999999999 899999999999999999985
No 25
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.67 E-value=9.9e-17 Score=131.13 Aligned_cols=93 Identities=18% Similarity=0.175 Sum_probs=78.1
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------CCCcEEEccCCCCCCCCCcee
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVD 191 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------~~~~~~~~d~~~lp~~~~sfD 191 (223)
..+...+....++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++++ ++||
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD 111 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYD 111 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCce
Confidence 3444555434467899999999999988876 3799999997 2678999999999987 8999
Q ss_pred EEEEcccccCCCHH---HHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGINFP---NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~d~~---~~l~e~~rvLkpgG~lvi 223 (223)
+|++..+++|++.+ .++.++.++|+|||.|+|
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99999999999544 599999999999999985
No 26
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.4e-16 Score=135.32 Aligned_cols=83 Identities=16% Similarity=0.267 Sum_probs=75.6
Q ss_pred CCCeEEEECCcchHHHHHhc------CceEEEecCC-----------------CCCcEEEccCCCCCCCC------Ccee
Q 027441 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS-----------------NDPSVIACDMSNTPLNS------SSVD 191 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------~~v~gvDis~-----------------~~~~~~~~d~~~lp~~~------~sfD 191 (223)
++.+|||||||+|.++..++ .+|+|+|+|+ .++.++++|+..+++.+ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 67899999999999888876 3799999986 26789999999998877 8999
Q ss_pred EEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|++..++||+++..++.++.++|+|||.|+|
T Consensus 116 ~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 116 MITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 99999999999999999999999999999975
No 27
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.66 E-value=4.2e-16 Score=126.62 Aligned_cols=82 Identities=26% Similarity=0.318 Sum_probs=75.7
Q ss_pred CCCeEEEECCcchHHHHHhcCceEEEecCC--------CCCcEEEccCCCCCCCCCceeEEEEcccccCC-CHHHHHHHH
Q 027441 141 PSLVIADFGCGDARLAKSVKNKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYLQEA 211 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la~~v~gvDis~--------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d~~~~l~e~ 211 (223)
++.+|||||||+|.++..++.. +|+|+++ .++.++.+|+..+|+++++||+|++..+++|+ ++..+|.++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~ 125 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERALKEA 125 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHHHHHH
Confidence 4789999999999999999877 9999997 36788999999999988999999999999999 899999999
Q ss_pred HHccCCCCEEEc
Q 027441 212 QRVLKPRGEEQI 223 (223)
Q Consensus 212 ~rvLkpgG~lvi 223 (223)
.++|+|||.|+|
T Consensus 126 ~~~L~pgG~l~i 137 (219)
T 1vlm_A 126 YRILKKGGYLIV 137 (219)
T ss_dssp HHHEEEEEEEEE
T ss_pred HHHcCCCcEEEE
Confidence 999999999985
No 28
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.66 E-value=1.7e-16 Score=130.08 Aligned_cols=93 Identities=22% Similarity=0.328 Sum_probs=80.5
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---C-ceEEEecCC------------CCCcEEEccCCCCCCCCCceeEE
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---N-KVFSFDLVS------------NDPSVIACDMSNTPLNSSSVDVA 193 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~-~v~gvDis~------------~~~~~~~~d~~~lp~~~~sfD~V 193 (223)
..+...+... ++.+|||||||+|.++..++ . +|+|+|+++ .++.+..+|+..+++++++||+|
T Consensus 33 ~~l~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v 111 (243)
T 3bkw_A 33 PALRAMLPEV-GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLA 111 (243)
T ss_dssp HHHHHHSCCC-TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEE
T ss_pred HHHHHhcccc-CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEE
Confidence 3455555443 67899999999999988887 3 899999996 25788899999999888999999
Q ss_pred EEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
++..+++|+ ++..+|.++.++|+|||.|+|
T Consensus 112 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 112 YSSLALHYVEDVARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEeccccccchHHHHHHHHHHhcCcCcEEEE
Confidence 999999999 899999999999999999985
No 29
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.65 E-value=1.3e-16 Score=134.44 Aligned_cols=83 Identities=24% Similarity=0.356 Sum_probs=75.2
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC----------------CCCcEEEccCCCCC-CCCCceeEEEEccccc
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTP-LNSSSVDVAVFCLSLM 200 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------------~~~~~~~~d~~~lp-~~~~sfD~Vi~~~~l~ 200 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++ +.+++||+|++..+++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLE 147 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhh
Confidence 45799999999999999887 5899999996 35678999999887 7889999999999999
Q ss_pred CC-CHHHHHHHHHHccCCCCEEEc
Q 027441 201 GI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
|+ ++..+|.++.++|+|||.|+|
T Consensus 148 ~~~~~~~~l~~~~~~LkpgG~l~~ 171 (285)
T 4htf_A 148 WVADPRSVLQTLWSVLRPGGVLSL 171 (285)
T ss_dssp GCSCHHHHHHHHHHTEEEEEEEEE
T ss_pred cccCHHHHHHHHHHHcCCCeEEEE
Confidence 99 899999999999999999985
No 30
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.65 E-value=1.5e-16 Score=133.25 Aligned_cols=84 Identities=21% Similarity=0.418 Sum_probs=76.7
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l 199 (223)
.++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|+++++||+|++..++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 477899999999999988886 4799999996 36788999999999999999999999999
Q ss_pred cCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|+ ++..++.++.++|+|||.|+|
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEE
Confidence 999 899999999999999999985
No 31
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.65 E-value=3.8e-16 Score=126.53 Aligned_cols=93 Identities=15% Similarity=0.191 Sum_probs=79.3
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC----------C----------CCcEEEccCCCCC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------N----------DPSVIACDMSNTP 184 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------~----------~~~~~~~d~~~lp 184 (223)
+.+.+.+... ++.+|||||||+|.++..++ .+|+|+|+++ . ++.++.+|+..++
T Consensus 19 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 19 GTVVAVLKSV-NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHT-TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHhhc-CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 4556666554 67899999999999999887 3799999997 1 7889999998888
Q ss_pred CCCCceeEEEEcccccCCCH---HHHHHHHHHccCCCCEEEc
Q 027441 185 LNSSSVDVAVFCLSLMGINF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 185 ~~~~sfD~Vi~~~~l~~~d~---~~~l~e~~rvLkpgG~lvi 223 (223)
+.+++||+|++..+++|++. ..++.++.++|+|||+|++
T Consensus 98 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~ 139 (219)
T 3jwg_A 98 KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVS 139 (219)
T ss_dssp GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEE
Confidence 88899999999999999944 4999999999999997763
No 32
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.65 E-value=1.3e-16 Score=132.30 Aligned_cols=84 Identities=19% Similarity=0.239 Sum_probs=76.0
Q ss_pred CCCCeEEEECCcchHHHHHhc----CceEEEecCC-------------CCCcEEEccCCCCCCCCCceeEEEEcccccCC
Q 027441 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI 202 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~-------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~ 202 (223)
.++.+|||||||+|.++..++ .+|+|+|+|+ .++.++.+|+..+|+++++||+|++..+++|+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhc
Confidence 367899999999999988876 4799999997 36788999999999999999999999999999
Q ss_pred ---CHHHHHHHHHHccCCCCEEEc
Q 027441 203 ---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 203 ---d~~~~l~e~~rvLkpgG~lvi 223 (223)
++..++.++.++|+|||.|+|
T Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 134 SLENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEE
Confidence 677999999999999999985
No 33
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.65 E-value=1.5e-16 Score=128.17 Aligned_cols=93 Identities=19% Similarity=0.203 Sum_probs=80.0
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------CCCcEEEccCCCCCCCCCceeEEEEcc
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------~~~~~~~~d~~~lp~~~~sfD~Vi~~~ 197 (223)
..+...+....++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+|+..++ .+++||+|++..
T Consensus 32 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~ 110 (211)
T 3e23_A 32 ATLTKFLGELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTMLFHQLD-AIDAYDAVWAHA 110 (211)
T ss_dssp HHHHHHHTTSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCC-CCSCEEEEEECS
T ss_pred HHHHHHHHhcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEEeeeccCC-CCCcEEEEEecC
Confidence 3455555555577899999999999999887 4799999997 26788899999888 789999999999
Q ss_pred cccCC---CHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+++|+ ++..+|.++.++|+|||.|+|
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 139 (211)
T 3e23_A 111 CLLHVPRDELADVLKLIWRALKPGGLFYA 139 (211)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99999 566999999999999999985
No 34
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.65 E-value=2.4e-16 Score=131.79 Aligned_cols=82 Identities=17% Similarity=0.169 Sum_probs=71.9
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC---------C-----------------------CCcEEEccCCCCCC
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------N-----------------------DPSVIACDMSNTPL 185 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------~-----------------------~~~~~~~d~~~lp~ 185 (223)
++.+|||+|||+|..+..|+ .+|+|+|+|+ . ++.++++|+..+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 67899999999999999998 4799999996 1 35688999999987
Q ss_pred CC-CceeEEEEcccccCC---CHHHHHHHHHHccCCCCEEE
Q 027441 186 NS-SSVDVAVFCLSLMGI---NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 186 ~~-~sfD~Vi~~~~l~~~---d~~~~l~e~~rvLkpgG~lv 222 (223)
.+ ++||+|++..+++|+ +...++.++.++|+|||.|+
T Consensus 148 ~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 64 899999999999998 34589999999999999985
No 35
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.65 E-value=2.5e-16 Score=133.12 Aligned_cols=93 Identities=20% Similarity=0.280 Sum_probs=79.4
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC--------------CCCcEEEccCCCCCCCCCc
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSS 189 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~s 189 (223)
..+.+.+....++.+|||||||+|.++..++ .+|+|+|+++ .++.+.++|+..+|+ +++
T Consensus 11 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~ 89 (284)
T 3gu3_A 11 SFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-NDK 89 (284)
T ss_dssp HHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SSC
T ss_pred HHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc-CCC
Confidence 3444444444477899999999999999886 3799999997 267889999999988 469
Q ss_pred eeEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
||+|++..+++|+ ++..++.++.++|+|||+|++
T Consensus 90 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 124 (284)
T 3gu3_A 90 YDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIIC 124 (284)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEE
T ss_pred eeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEE
Confidence 9999999999999 999999999999999999984
No 36
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.65 E-value=3.4e-16 Score=126.45 Aligned_cols=83 Identities=14% Similarity=0.251 Sum_probs=73.7
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCC-------------CCCcEEEccCCCCCCCCCceeEEEEcccccCC-
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI- 202 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~- 202 (223)
.++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++ ++++||+|++..+++|+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 128 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYLE 128 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSS
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhCC
Confidence 366899999999999999988 4799999996 35789999999988 67899999999999999
Q ss_pred CH---HHHHHHHHHccCCCCEEEc
Q 027441 203 NF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 203 d~---~~~l~e~~rvLkpgG~lvi 223 (223)
++ ..++.++.++|+|||.|+|
T Consensus 129 ~~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 129 DMTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 56 4779999999999999985
No 37
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.65 E-value=2.9e-16 Score=126.43 Aligned_cols=83 Identities=19% Similarity=0.306 Sum_probs=76.7
Q ss_pred CCCeEEEECCcchHHHHHhcC-ceEEEecCC----------CCCcEEEccCCCCCCCCCceeEEEEcccccCC-CHHHHH
Q 027441 141 PSLVIADFGCGDARLAKSVKN-KVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYL 208 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la~-~v~gvDis~----------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d~~~~l 208 (223)
++.+|||||||+|.++..+.. +|+|+|+++ .++.++.+|+..+|+++++||+|++..+++|+ ++..++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l 115 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRLPYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVL 115 (211)
T ss_dssp CCSEEEEETCTTCHHHHHCCCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHH
T ss_pred CCCeEEEECCCCCHhHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHH
Confidence 678999999999999998865 899999997 37889999999999999999999999999999 899999
Q ss_pred HHHHHccCCCCEEEc
Q 027441 209 QEAQRVLKPRGEEQI 223 (223)
Q Consensus 209 ~e~~rvLkpgG~lvi 223 (223)
.++.++|+|||.|+|
T Consensus 116 ~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 116 LEARRVLRPGGALVV 130 (211)
T ss_dssp HHHHHHEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEE
Confidence 999999999999985
No 38
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.64 E-value=2.9e-16 Score=129.94 Aligned_cols=82 Identities=15% Similarity=0.165 Sum_probs=75.0
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC----------CCCcEEEccCCCCCCCCCceeEEEEcccccCC-CH
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NF 204 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d~ 204 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+|+..++ ++++||+|++..++||+ ++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~ 111 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWVPDH 111 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTTH
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhCCCH
Confidence 66899999999999988776 4799999996 47889999999988 78899999999999999 99
Q ss_pred HHHHHHHHHccCCCCEEEc
Q 027441 205 PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 205 ~~~l~e~~rvLkpgG~lvi 223 (223)
..+|.++.++|+|||.|+|
T Consensus 112 ~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 112 LAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp HHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEE
Confidence 9999999999999999985
No 39
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.64 E-value=5.8e-16 Score=124.18 Aligned_cols=94 Identities=17% Similarity=0.289 Sum_probs=78.6
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHH-HHhc---CceEEEecCC--------------CCCcEEEccCCCCCCCCCcee
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLA-KSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVD 191 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a-~~la---~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD 191 (223)
..++..+....++.+|||+|||+|.++ ..++ .+|+|+|+++ .++.+..+|+..+|+++++||
T Consensus 12 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 91 (209)
T 2p8j_A 12 YRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMS 91 (209)
T ss_dssp HHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEE
T ss_pred HHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCcee
Confidence 345555555557789999999999873 3333 5899999996 367899999999999899999
Q ss_pred EEEEcccccCC---CHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|++..+++|+ ++..++.++.++|+|||.|++
T Consensus 92 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 92 FVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 99999999998 566999999999999999985
No 40
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.64 E-value=7.2e-16 Score=128.34 Aligned_cols=92 Identities=15% Similarity=0.255 Sum_probs=77.8
Q ss_pred HHHHHHhcc-CCCCeEEEECCcchHHHHHhc---CceEEEecCC----------CCCcEEEccCCCCCCCCCceeEEEEc
Q 027441 131 IIVKWLKDH-SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (223)
Q Consensus 131 ~i~~~l~~~-~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------~~~~~~~~d~~~lp~~~~sfD~Vi~~ 196 (223)
.+.+.+... +++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++ +++||+|++.
T Consensus 39 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~ 117 (263)
T 3pfg_A 39 DLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCM 117 (263)
T ss_dssp HHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEEC
T ss_pred HHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEc
Confidence 344444332 356899999999999999988 4799999997 478899999999988 7899999999
Q ss_pred c-cccCC----CHHHHHHHHHHccCCCCEEEc
Q 027441 197 L-SLMGI----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~-~l~~~----d~~~~l~e~~rvLkpgG~lvi 223 (223)
. +++|+ +...+|.++.++|+|||.|+|
T Consensus 118 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i 149 (263)
T 3pfg_A 118 FSSIGHLAGQAELDAALERFAAHVLPDGVVVV 149 (263)
T ss_dssp TTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CchhhhcCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 8 99999 445889999999999999986
No 41
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.64 E-value=5.2e-16 Score=125.67 Aligned_cols=93 Identities=16% Similarity=0.207 Sum_probs=78.9
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC----------C----------CCcEEEccCCCCC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------N----------DPSVIACDMSNTP 184 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------~----------~~~~~~~d~~~lp 184 (223)
+.+.+.+... ++.+|||||||+|.++..++ .+|+|+|+++ . ++.++.+|+...+
T Consensus 19 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 19 NGVVAALKQS-NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHHHHHHHHT-TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred HHHHHHHHhc-CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 4556666554 67899999999999999887 3899999996 1 6889999998888
Q ss_pred CCCCceeEEEEcccccCCCH---HHHHHHHHHccCCCCEEEc
Q 027441 185 LNSSSVDVAVFCLSLMGINF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 185 ~~~~sfD~Vi~~~~l~~~d~---~~~l~e~~rvLkpgG~lvi 223 (223)
+.+++||+|++..+++|++. ..++.++.++|+|||+|++
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~ 139 (217)
T 3jwh_A 98 KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVT 139 (217)
T ss_dssp GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 77889999999999999943 5999999999999998764
No 42
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.64 E-value=3e-16 Score=132.56 Aligned_cols=93 Identities=15% Similarity=0.177 Sum_probs=79.0
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC-------------------CCCcEEEccCCCCC---
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------------NDPSVIACDMSNTP--- 184 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-------------------~~~~~~~~d~~~lp--- 184 (223)
+.+...+... ++.+|||||||+|.++..++ .+|+|+|+|+ .++.+..+|+..+|
T Consensus 47 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 125 (293)
T 3thr_A 47 AWLLGLLRQH-GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV 125 (293)
T ss_dssp HHHHHHHHHT-TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS
T ss_pred HHHHHHhccc-CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc
Confidence 4555655544 67899999999999999887 4899999996 23456788888887
Q ss_pred CCCCceeEEEEc-ccccCC-C-------HHHHHHHHHHccCCCCEEEc
Q 027441 185 LNSSSVDVAVFC-LSLMGI-N-------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 185 ~~~~sfD~Vi~~-~~l~~~-d-------~~~~l~e~~rvLkpgG~lvi 223 (223)
+++++||+|+|. .+++|+ + +..++.++.++|+|||+|+|
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 788999999998 899999 7 88999999999999999985
No 43
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.62 E-value=4.1e-16 Score=121.36 Aligned_cols=89 Identities=22% Similarity=0.378 Sum_probs=76.8
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC----------CCCcEEEccCCCCCCCCCceeEEEEcc
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------~~~~~~~~d~~~lp~~~~sfD~Vi~~~ 197 (223)
.+++.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+| +++++++||+|++..
T Consensus 8 ~~~~~~~~~-~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~ 83 (170)
T 3i9f_A 8 EYLPNIFEG-KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFAN 83 (170)
T ss_dssp TTHHHHHSS-CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEES
T ss_pred HHHHhcCcC-CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEcc
Confidence 344555443 67899999999999999887 4799999997 467888888 778889999999999
Q ss_pred cccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+++|+ ++..++.++.++|+|||.|+|
T Consensus 84 ~l~~~~~~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 84 SFHDMDDKQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp CSTTCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred chhcccCHHHHHHHHHHhcCCCCEEEE
Confidence 99999 999999999999999999985
No 44
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.62 E-value=4.9e-16 Score=128.20 Aligned_cols=83 Identities=19% Similarity=0.284 Sum_probs=74.1
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC-------------CCCcEEEccCCCCCCCCCceeEEEEcccccCC-
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI- 202 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~-------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~- 202 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++++||+|++..+++|+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 172 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLT 172 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSC
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhCC
Confidence 67899999999999988876 4699999996 25778899999999988999999999999999
Q ss_pred --CHHHHHHHHHHccCCCCEEEc
Q 027441 203 --NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 203 --d~~~~l~e~~rvLkpgG~lvi 223 (223)
++..+|.++.++|+|||.|+|
T Consensus 173 ~~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 173 DADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEE
Confidence 367999999999999999986
No 45
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.61 E-value=8e-16 Score=125.68 Aligned_cols=83 Identities=16% Similarity=0.233 Sum_probs=72.2
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCC----------CCCcEEEccCCCCCCCCCceeEEEEcc-cccCC-C-
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCL-SLMGI-N- 203 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------~~~~~~~~d~~~lp~~~~sfD~Vi~~~-~l~~~-d- 203 (223)
.++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++ +++||+|+|.. +++|+ +
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~ 117 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTT 117 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSH
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCH
Confidence 367899999999999998887 5799999997 468899999999887 78999999655 89988 3
Q ss_pred --HHHHHHHHHHccCCCCEEEc
Q 027441 204 --FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 204 --~~~~l~e~~rvLkpgG~lvi 223 (223)
...+|.++.++|+|||.|+|
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~ 139 (239)
T 3bxo_A 118 EELGAAVASFAEHLEPGGVVVV 139 (239)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEE
Confidence 45899999999999999985
No 46
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.61 E-value=1.3e-15 Score=124.73 Aligned_cols=93 Identities=19% Similarity=0.208 Sum_probs=76.5
Q ss_pred HHHHHHHhcc-CCCCeEEEECCcchHHHHHhc---CceEEEecCC----------------CCCcEEEccCCCCCCCCCc
Q 027441 130 NIIVKWLKDH-SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSS 189 (223)
Q Consensus 130 ~~i~~~l~~~-~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~s 189 (223)
..+..++... .+..+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++ ++.+
T Consensus 54 ~~l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~ 132 (235)
T 3lcc_A 54 PLIVHLVDTSSLPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTEL 132 (235)
T ss_dssp HHHHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSC
T ss_pred HHHHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCC
Confidence 3455555432 244699999999999999988 4799999996 23778999999887 4569
Q ss_pred eeEEEEcccccCC---CHHHHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMGI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
||+|++..+++|+ ++..++.++.++|+|||.|++
T Consensus 133 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 133 FDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp EEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred eeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEE
Confidence 9999999999999 567999999999999999985
No 47
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.61 E-value=6.7e-16 Score=125.52 Aligned_cols=83 Identities=25% Similarity=0.338 Sum_probs=75.0
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC------------C--------CCcEEEccCCCCCCCCCceeEEEEcc
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------N--------DPSVIACDMSNTPLNSSSVDVAVFCL 197 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~------------~--------~~~~~~~d~~~lp~~~~sfD~Vi~~~ 197 (223)
++.+|||||||+|.++..++ .+|+|+|+++ . ++.+..+|+..+++++++||+|++..
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 109 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQA 109 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcc
Confidence 67899999999999999887 5899999996 1 35788999999999999999999999
Q ss_pred cccCC-CHH---HHHHHHHHccCCCCEEEc
Q 027441 198 SLMGI-NFP---NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~-d~~---~~l~e~~rvLkpgG~lvi 223 (223)
+++|+ ++. .++.++.++|+|||.|+|
T Consensus 110 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 110 FLTSVPDPKERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp CGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhcCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 99999 777 899999999999999985
No 48
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.61 E-value=1.3e-15 Score=120.88 Aligned_cols=92 Identities=22% Similarity=0.320 Sum_probs=78.8
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcEEEccCCCCCCCCCcee
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVD 191 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD 191 (223)
..+.+.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+|+..+++ +++||
T Consensus 22 ~~l~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D 99 (199)
T 2xvm_A 22 SEVLEAVKVV-KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYD 99 (199)
T ss_dssp HHHHHHTTTS-CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEE
T ss_pred HHHHHHhhcc-CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCce
Confidence 3455666544 66899999999999998887 4799999997 267889999999888 88999
Q ss_pred EEEEcccccCC---CHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|++..+++|+ ++..++.++.++|+|||.|+|
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99999999998 567999999999999999764
No 49
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=1.4e-15 Score=123.35 Aligned_cols=83 Identities=20% Similarity=0.356 Sum_probs=73.1
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEEEEccccc--C
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM--G 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~--~ 201 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++++||+|++..+++ |
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCC
Confidence 57899999999999998887 4899999996 467899999999988889999999999954 4
Q ss_pred C-CHHHHHHHHHHccCCCCEEEc
Q 027441 202 I-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
. ++..++.++.++|+|||.|++
T Consensus 118 ~~~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 118 PLELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEE
Confidence 4 677999999999999999975
No 50
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.60 E-value=4.1e-16 Score=128.34 Aligned_cols=83 Identities=19% Similarity=0.314 Sum_probs=72.9
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEcccccC
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~ 201 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++++||+|++..+++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 57899999999999999876 3799999996 1367889999999888889999999999999
Q ss_pred C-C--HHHHHHHHHHccCCCCEEEc
Q 027441 202 I-N--FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~-d--~~~~l~e~~rvLkpgG~lvi 223 (223)
+ + ...+|.++.++|+|||.|+|
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 9 4 34899999999999999985
No 51
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.60 E-value=6.9e-16 Score=124.67 Aligned_cols=93 Identities=16% Similarity=0.239 Sum_probs=76.8
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------CCCcEEEccCCCC---CCCC-CceeEE
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------NDPSVIACDMSNT---PLNS-SSVDVA 193 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------~~~~~~~~d~~~l---p~~~-~sfD~V 193 (223)
..++..+... ++.+|||||||+|.++..++ .+|+|+|+++ ..+.+..+|+..+ ++.. .+||+|
T Consensus 42 ~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v 120 (227)
T 3e8s_A 42 QAILLAILGR-QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLI 120 (227)
T ss_dssp HHHHHHHHHT-CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEE
T ss_pred HHHHHHhhcC-CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEE
Confidence 3456666655 56999999999999999887 4799999997 4567888877665 5444 459999
Q ss_pred EEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
++..++++.++..++.++.++|+|||.|+|
T Consensus 121 ~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~ 150 (227)
T 3e8s_A 121 CANFALLHQDIIELLSAMRTLLVPGGALVI 150 (227)
T ss_dssp EEESCCCSSCCHHHHHHHHHTEEEEEEEEE
T ss_pred EECchhhhhhHHHHHHHHHHHhCCCeEEEE
Confidence 999999955999999999999999999985
No 52
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.60 E-value=2.2e-15 Score=123.22 Aligned_cols=93 Identities=23% Similarity=0.359 Sum_probs=78.3
Q ss_pred HHHHHHHhcc-CCCCeEEEECCcchHHHHHhc---CceEEEecCC--------------CCCcEEEccCCCCCCCCCcee
Q 027441 130 NIIVKWLKDH-SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVD 191 (223)
Q Consensus 130 ~~i~~~l~~~-~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD 191 (223)
+.+...+... .++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++++ ++||
T Consensus 25 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD 103 (246)
T 1y8c_A 25 DFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFD 103 (246)
T ss_dssp HHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEE
T ss_pred HHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCce
Confidence 4455555543 366899999999999999887 4799999996 1688999999988877 8899
Q ss_pred EEEEcc-cccCC----CHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCL-SLMGI----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~-~l~~~----d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|++.. +++|+ ++..+|.++.++|+|||.|+|
T Consensus 104 ~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 104 LITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 999998 99998 456999999999999999985
No 53
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.59 E-value=1.4e-15 Score=123.13 Aligned_cols=92 Identities=17% Similarity=0.280 Sum_probs=77.9
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC--------CCCcEEEccCCC--CCCCCCceeEEEEc
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------NDPSVIACDMSN--TPLNSSSVDVAVFC 196 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------~~~~~~~~d~~~--lp~~~~sfD~Vi~~ 196 (223)
..+++.+. .++.+|||||||+|.++..++ .+|+|+|+++ ....+..+|+.. .++++++||+|++.
T Consensus 23 ~~l~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 23 PNLLKHIK--KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp HHHHTTCC--TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred HHHHHHhc--cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEEC
Confidence 34455444 367899999999999998887 4799999997 234678899876 67778999999999
Q ss_pred ccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 197 LSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
.+++|+ ++..++.++.++|+|||.|++
T Consensus 101 ~~l~~~~~~~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 101 DVLEHLFDPWAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp SCGGGSSCHHHHHHHTGGGEEEEEEEEE
T ss_pred ChhhhcCCHHHHHHHHHHHcCCCCEEEE
Confidence 999999 899999999999999999985
No 54
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.59 E-value=2.4e-15 Score=126.35 Aligned_cols=116 Identities=9% Similarity=0.053 Sum_probs=80.8
Q ss_pred cChHHHHHHHHhHHhhhc--cCCCchHHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCCC--------
Q 027441 105 ENPALFDMYHSGYQEQMS--HWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN-------- 171 (223)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~--~~p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~~-------- 171 (223)
..+..|+.....|..... .|+ .....++..+... ++.+|||||||+|.++..|+ .+|+|+|+|+.
T Consensus 9 s~a~~wd~~a~~f~~~~~~~~~~-~~~~~il~~l~l~-~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~ 86 (261)
T 3iv6_A 9 SKAEAWELIGNQFWTIGRVAARP-SDRENDIFLENIV-PGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEA 86 (261)
T ss_dssp TTHHHHHTTTTHHHHTSCGGGSC-CHHHHHHHTTTCC-TTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHhhccccH-HHHHHHHHhcCCC-CcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHH
Confidence 344445544444443322 133 2334566655443 77899999999999999887 58999999971
Q ss_pred -CCcEEEccCCCCCC-----CCCceeEEEEcccccCC---CHHHHHHHHHHccCCCCEEEc
Q 027441 172 -DPSVIACDMSNTPL-----NSSSVDVAVFCLSLMGI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 172 -~~~~~~~d~~~lp~-----~~~sfD~Vi~~~~l~~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
...++.+++..++. .+++||+|++..++||+ +...++.++.++| |||.|++
T Consensus 87 ~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~l 146 (261)
T 3iv6_A 87 LADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRA 146 (261)
T ss_dssp TSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEE
T ss_pred HHhccceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEE
Confidence 11144555555544 25789999999999998 4457999999999 9999975
No 55
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.59 E-value=2.1e-15 Score=133.02 Aligned_cols=83 Identities=24% Similarity=0.310 Sum_probs=75.1
Q ss_pred CCCeEEEECCcchHHHHHhc------CceEEEecCC-----------------------CCCcEEEccCCCC------CC
Q 027441 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS-----------------------NDPSVIACDMSNT------PL 185 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------~~v~gvDis~-----------------------~~~~~~~~d~~~l------p~ 185 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+ |+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 67899999999999888775 3799999986 2678899999887 89
Q ss_pred CCCceeEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 186 NSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 186 ~~~sfD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
++++||+|++..+++|+ ++..+|.++.|+|+|||+|+|
T Consensus 163 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEE
Confidence 99999999999999999 999999999999999999985
No 56
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.58 E-value=2.4e-15 Score=127.97 Aligned_cols=81 Identities=15% Similarity=0.211 Sum_probs=71.5
Q ss_pred CCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l 199 (223)
.++.+|||||||+|.++..++ .+|+|+|+|+ .++.+..+|+.++ +++||+|++..++
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~ 147 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAF 147 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCG
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchH
Confidence 367899999999999988886 5799999996 2577889999776 6899999999999
Q ss_pred cCC-CH---------HHHHHHHHHccCCCCEEEc
Q 027441 200 MGI-NF---------PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~-d~---------~~~l~e~~rvLkpgG~lvi 223 (223)
+|+ ++ ..++.++.++|+|||.|+|
T Consensus 148 ~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 148 EHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp GGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred HhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 999 54 6999999999999999985
No 57
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.58 E-value=7.3e-15 Score=115.73 Aligned_cols=83 Identities=22% Similarity=0.303 Sum_probs=73.7
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC----------CCCcEEEccCCCCCCCCCceeEEEEc-ccccCCC---
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFC-LSLMGIN--- 203 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------~~~~~~~~d~~~lp~~~~sfD~Vi~~-~~l~~~d--- 203 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++++||+|++. .+++|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~ 125 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDG 125 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChHH
Confidence 67899999999999998887 5799999997 46889999999988888999999998 6888873
Q ss_pred HHHHHHHHHHccCCCCEEEc
Q 027441 204 FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lvi 223 (223)
...++.++.++|+|||.+++
T Consensus 126 ~~~~l~~~~~~l~~~G~l~~ 145 (195)
T 3cgg_A 126 REPALANIHRALGADGRAVI 145 (195)
T ss_dssp HHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEE
Confidence 46999999999999999985
No 58
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.58 E-value=3e-15 Score=126.13 Aligned_cols=81 Identities=19% Similarity=0.289 Sum_probs=71.5
Q ss_pred CCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l 199 (223)
.++.+|||||||+|.++..++ .+|+|+|+|+ .++.+..+|+..+| ++||+|++..++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l 139 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAF 139 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCG
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCch
Confidence 367899999999999888776 4899999996 25778889997776 789999999999
Q ss_pred cCC---CHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|+ ++..+|.++.++|+|||.|+|
T Consensus 140 ~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 140 EHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp GGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred hhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 998 678999999999999999985
No 59
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.58 E-value=4.5e-16 Score=130.32 Aligned_cols=83 Identities=19% Similarity=0.274 Sum_probs=66.7
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCCCC--------------------------------------------
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVSND-------------------------------------------- 172 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~~~-------------------------------------------- 172 (223)
++.+|||||||+|.++..++ .+|+|+|+|+..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 56899999999998776654 369999999610
Q ss_pred C-cEEEccCCC-CCC---CCCceeEEEEcccccCC-----CHHHHHHHHHHccCCCCEEEc
Q 027441 173 P-SVIACDMSN-TPL---NSSSVDVAVFCLSLMGI-----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 173 ~-~~~~~d~~~-lp~---~~~sfD~Vi~~~~l~~~-----d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ .++.+|+.. .|+ ...+||+|++++++||+ ++..++.+++|+|||||.|+|
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~ 195 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVT 195 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 1 177889877 344 35799999999999985 345899999999999999986
No 60
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.58 E-value=2.9e-15 Score=126.26 Aligned_cols=84 Identities=17% Similarity=0.161 Sum_probs=73.0
Q ss_pred CCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCC-CCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPL-NSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~-~~~sfD~Vi~~~~ 198 (223)
.++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|+ .+++||+|++..+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 367899999999999888776 3899999996 136888999999888 6889999999999
Q ss_pred ccC--C---CHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMG--I---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~--~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|| . ++..+|.++.++|+|||.|+|
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 988 2 567999999999999999985
No 61
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.58 E-value=1.9e-15 Score=120.83 Aligned_cols=90 Identities=14% Similarity=0.119 Sum_probs=73.6
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEE
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVA 193 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~V 193 (223)
.+...+....++ +|||||||+|.++..++ .+|+|+|+++ .++.+..+|+..+++++++||+|
T Consensus 20 ~l~~~~~~~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v 98 (202)
T 2kw5_A 20 FLVSVANQIPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGI 98 (202)
T ss_dssp SHHHHHHHSCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEE
T ss_pred HHHHHHHhCCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEE
Confidence 344444444456 99999999999998887 4799999996 26788899999999888999999
Q ss_pred EEcccccCC---CHHHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLMGI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
++.. .|. ++..++.++.++|+|||.|++
T Consensus 99 ~~~~--~~~~~~~~~~~l~~~~~~L~pgG~l~~ 129 (202)
T 2kw5_A 99 VSIF--CHLPSSLRQQLYPKVYQGLKPGGVFIL 129 (202)
T ss_dssp EEEC--CCCCHHHHHHHHHHHHTTCCSSEEEEE
T ss_pred EEEh--hcCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 9964 344 567999999999999999985
No 62
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.57 E-value=4.4e-15 Score=125.17 Aligned_cols=92 Identities=21% Similarity=0.261 Sum_probs=78.7
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeE
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDV 192 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~ 192 (223)
..+++.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++ +++||+
T Consensus 110 ~~~~~~~~~~-~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~ 187 (286)
T 3m70_A 110 GDVVDAAKII-SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDF 187 (286)
T ss_dssp HHHHHHHHHS-CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEE
T ss_pred HHHHHHhhcc-CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccE
Confidence 3455666555 78999999999999999887 5899999997 267889999998887 789999
Q ss_pred EEEcccccCCC---HHHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGIN---FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~d---~~~~l~e~~rvLkpgG~lvi 223 (223)
|++..+++|++ ...++.++.++|+|||.|+|
T Consensus 188 i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 188 IVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp EEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99999999993 45999999999999999764
No 63
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.57 E-value=9.4e-16 Score=129.66 Aligned_cols=94 Identities=17% Similarity=0.293 Sum_probs=71.1
Q ss_pred HHHHHHHhcc-CCCCeEEEECCcchHHHHHhc----CceEEEecCCCCC-------------------------------
Q 027441 130 NIIVKWLKDH-SPSLVIADFGCGDARLAKSVK----NKVFSFDLVSNDP------------------------------- 173 (223)
Q Consensus 130 ~~i~~~l~~~-~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~~~~------------------------------- 173 (223)
..+.+.+... .++.+|||||||+|.++..++ .+|+|+|+|+..+
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 138 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGE 138 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCC
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCccc
Confidence 3455555432 256899999999999654443 4799999997211
Q ss_pred --------------cEEEccCCC-CCC-----CCCceeEEEEcccccC----C-CHHHHHHHHHHccCCCCEEEc
Q 027441 174 --------------SVIACDMSN-TPL-----NSSSVDVAVFCLSLMG----I-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 174 --------------~~~~~d~~~-lp~-----~~~sfD~Vi~~~~l~~----~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
.++.+|+.. +|+ ++++||+|++.++++| + ++..+|.++.|+|||||.|+|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~ 213 (289)
T 2g72_A 139 CWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLL 213 (289)
T ss_dssp CHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred chhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 234458877 664 3467999999999999 5 678999999999999999985
No 64
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.57 E-value=1e-15 Score=129.87 Aligned_cols=83 Identities=13% Similarity=0.083 Sum_probs=63.4
Q ss_pred CCCeEEEECCcchHHHHH----hc-----Cc--eEEEecCCC----------------CCcE--EEccCCCCC------C
Q 027441 141 PSLVIADFGCGDARLAKS----VK-----NK--VFSFDLVSN----------------DPSV--IACDMSNTP------L 185 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~----la-----~~--v~gvDis~~----------------~~~~--~~~d~~~lp------~ 185 (223)
++.+|||||||+|.++.. ++ .. ++|+|+|+. ++.+ ..+++..++ +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 567999999999976542 22 22 399999961 2223 233443333 5
Q ss_pred CCCceeEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 186 NSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 186 ~~~sfD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
++++||+|++..++||+ |+..+|.+++|+|||||.|+|
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEE
Confidence 68899999999999999 899999999999999999985
No 65
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.57 E-value=5.5e-15 Score=118.48 Aligned_cols=93 Identities=26% Similarity=0.271 Sum_probs=77.2
Q ss_pred HHHHHHhcc-CCCCeEEEECCcchHHHHHhc----CceEEEecCC-------------CCCcEEEccCCCCCCCCCceeE
Q 027441 131 IIVKWLKDH-SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDV 192 (223)
Q Consensus 131 ~i~~~l~~~-~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~-------------~~~~~~~~d~~~lp~~~~sfD~ 192 (223)
.+...+... .++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+|+..+++++++||+
T Consensus 31 ~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 110 (215)
T 2pxx_A 31 SFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDV 110 (215)
T ss_dssp HHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEE
T ss_pred HHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccE
Confidence 345555432 467899999999999988886 3799999996 3678899999999998899999
Q ss_pred EEEcccccCC----------------CHHHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGI----------------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~----------------d~~~~l~e~~rvLkpgG~lvi 223 (223)
|++..+++|+ +...++.++.++|+|||.|++
T Consensus 111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 157 (215)
T 2pxx_A 111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFIS 157 (215)
T ss_dssp EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEE
Confidence 9998888654 346999999999999999985
No 66
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.56 E-value=1e-15 Score=126.40 Aligned_cols=83 Identities=17% Similarity=0.161 Sum_probs=67.7
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC--------------CCCcEEEccCCC--CCCCCCceeEEEE-----
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS--------------NDPSVIACDMSN--TPLNSSSVDVAVF----- 195 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~--------------~~~~~~~~d~~~--lp~~~~sfD~Vi~----- 195 (223)
++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+.. .++++++||.|++
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 67899999999999999887 4789999997 244566777654 3577899999975
Q ss_pred cccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
..+++|+ ++..++.++.|+|||||+|++
T Consensus 140 ~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred ccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 4455566 888999999999999999874
No 67
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.55 E-value=7e-15 Score=122.47 Aligned_cols=83 Identities=18% Similarity=0.242 Sum_probs=72.3
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCCC---------CCcEEEccCCCCCCCCCceeEEEEcccccCC--CHHH
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVSN---------DPSVIACDMSNTPLNSSSVDVAVFCLSLMGI--NFPN 206 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~~---------~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~--d~~~ 206 (223)
++.+|||||||+|.++..++ .+|+|+|+|+. ...++.+|+..+|+++++||+|++..+++|+ ++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~ 133 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDK 133 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhccccHHH
Confidence 67899999999999999887 47999999971 1238899999999989999999998876654 7889
Q ss_pred HHHHHHHccCCCCEEEc
Q 027441 207 YLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 207 ~l~e~~rvLkpgG~lvi 223 (223)
+|.++.++|+|||.|+|
T Consensus 134 ~l~~~~~~LkpgG~l~~ 150 (260)
T 2avn_A 134 AFSEIRRVLVPDGLLIA 150 (260)
T ss_dssp HHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEE
Confidence 99999999999999985
No 68
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.55 E-value=4e-16 Score=138.54 Aligned_cols=92 Identities=16% Similarity=0.245 Sum_probs=72.8
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCCC--------CCcE-----EEccCCCCCCCCCceeEEE
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN--------DPSV-----IACDMSNTPLNSSSVDVAV 194 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~~--------~~~~-----~~~d~~~lp~~~~sfD~Vi 194 (223)
.+++.+.. .++.+|||||||+|.++..++ .+|+|+|+|+. .+.. ...+...+|+++++||+|+
T Consensus 98 ~l~~~~~~-~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~ 176 (416)
T 4e2x_A 98 DFLATELT-GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIY 176 (416)
T ss_dssp HHHHTTTC-SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEE
T ss_pred HHHHHhCC-CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEE
Confidence 34444332 367899999999999999887 47999999962 1222 2234445667789999999
Q ss_pred EcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 195 FCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 195 ~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+..+++|+ ++..+|.++.++|+|||+|+|
T Consensus 177 ~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i 206 (416)
T 4e2x_A 177 AANTLCHIPYVQSVLEGVDALLAPDGVFVF 206 (416)
T ss_dssp EESCGGGCTTHHHHHHHHHHHEEEEEEEEE
T ss_pred ECChHHhcCCHHHHHHHHHHHcCCCeEEEE
Confidence 99999999 999999999999999999985
No 69
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.54 E-value=4.3e-15 Score=126.29 Aligned_cols=83 Identities=17% Similarity=0.266 Sum_probs=71.4
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------------------------------------
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------------------------------------- 170 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------------------------------------------- 170 (223)
++.+|||||||+|.++..++ .+|+|+|+++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 57899999999999988876 4799999986
Q ss_pred ----------------------------CCCcEEEccCCCCC-----CCCCceeEEEEcccccCC-------CHHHHHHH
Q 027441 171 ----------------------------NDPSVIACDMSNTP-----LNSSSVDVAVFCLSLMGI-------NFPNYLQE 210 (223)
Q Consensus 171 ----------------------------~~~~~~~~d~~~lp-----~~~~sfD~Vi~~~~l~~~-------d~~~~l~e 210 (223)
.++.|..+|+...+ +.+++||+|+|..+++|+ ++..+|.+
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 15778888887644 578899999999999876 56699999
Q ss_pred HHHccCCCCEEEc
Q 027441 211 AQRVLKPRGEEQI 223 (223)
Q Consensus 211 ~~rvLkpgG~lvi 223 (223)
++++|+|||+|+|
T Consensus 206 ~~~~LkpGG~lil 218 (292)
T 3g07_A 206 IYRHLRPGGILVL 218 (292)
T ss_dssp HHHHEEEEEEEEE
T ss_pred HHHHhCCCcEEEE
Confidence 9999999999986
No 70
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.54 E-value=2e-15 Score=126.02 Aligned_cols=88 Identities=20% Similarity=0.361 Sum_probs=71.9
Q ss_pred HHHHHHHhcc--CCCCeEEEECCcchHHHHHhc-----CceEEEecCC----------CCCcEEEccCCCCCCCCCceeE
Q 027441 130 NIIVKWLKDH--SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDV 192 (223)
Q Consensus 130 ~~i~~~l~~~--~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------~~~~~~~~d~~~lp~~~~sfD~ 192 (223)
..+.+.+... .++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+|+..+|+++++||+
T Consensus 72 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~ 151 (269)
T 1p91_A 72 DAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDA 151 (269)
T ss_dssp HHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeE
Confidence 3444444432 367899999999999888776 3799999997 4678999999999999999999
Q ss_pred EEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
|++..+. .++.++.++|+|||.|++
T Consensus 152 v~~~~~~------~~l~~~~~~L~pgG~l~~ 176 (269)
T 1p91_A 152 IIRIYAP------CKAEELARVVKPGGWVIT 176 (269)
T ss_dssp EEEESCC------CCHHHHHHHEEEEEEEEE
T ss_pred EEEeCCh------hhHHHHHHhcCCCcEEEE
Confidence 9987763 468999999999999975
No 71
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.54 E-value=2.2e-14 Score=119.84 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=74.3
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCCC----------------------CCcEEEcc---
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVSN----------------------DPSVIACD--- 179 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~~----------------------~~~~~~~d--- 179 (223)
.+++.+... ++.+|||||||+|.++..++ .+|+|+|+|+. ++.+..+|
T Consensus 34 ~l~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 112 (275)
T 3bkx_A 34 AIAEAWQVK-PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLS 112 (275)
T ss_dssp HHHHHHTCC-TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTT
T ss_pred HHHHHcCCC-CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhh
Confidence 455555433 77899999999999888775 47999999873 46778887
Q ss_pred CCCCCCCCCceeEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 180 MSNTPLNSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 180 ~~~lp~~~~sfD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+|+++++||+|++..+++|+ ++..++..+.++++|||.|++
T Consensus 113 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~ 157 (275)
T 3bkx_A 113 DDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDV 157 (275)
T ss_dssp TCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEE
T ss_pred hccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEE
Confidence 45677788999999999999999 777777777777777999975
No 72
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.54 E-value=1.8e-14 Score=117.86 Aligned_cols=82 Identities=26% Similarity=0.332 Sum_probs=71.8
Q ss_pred CCCeEEEECCcchHHHHHhc--CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEEEEcc-cccCC-
Q 027441 141 PSLVIADFGCGDARLAKSVK--NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCL-SLMGI- 202 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la--~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~-~l~~~- 202 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++++ ++||+|++.. +++|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~ 111 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQ 111 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCC
T ss_pred CCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcC
Confidence 56899999999999999888 4799999996 3578899999888876 8899999987 99988
Q ss_pred ---CHHHHHHHHHHccCCCCEEEc
Q 027441 203 ---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 203 ---d~~~~l~e~~rvLkpgG~lvi 223 (223)
++..++.++.++|+|||.|++
T Consensus 112 ~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 112 TEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp SHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 345899999999999999985
No 73
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.54 E-value=2.4e-15 Score=123.55 Aligned_cols=83 Identities=18% Similarity=0.191 Sum_probs=68.9
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC--------------CCCcEEEccCCCC--CCCCCceeEEEE-cccc
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS--------------NDPSVIACDMSNT--PLNSSSVDVAVF-CLSL 199 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~--------------~~~~~~~~d~~~l--p~~~~sfD~Vi~-~~~l 199 (223)
++.+|||||||+|.++..++ .+|+|+|+|+ .++.++.+|+.++ |+++++||+|++ .+++
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 67899999999999999887 3799999997 3467888999887 899999999999 5554
Q ss_pred c--C--C-CHHHHHHHHHHccCCCCEEEc
Q 027441 200 M--G--I-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~--~--~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ . . ++..++.++.|+|||||+|++
T Consensus 140 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred chhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 2 1 2 345789999999999999974
No 74
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.53 E-value=1.5e-14 Score=115.44 Aligned_cols=84 Identities=14% Similarity=0.221 Sum_probs=70.0
Q ss_pred CCCCeEEEECCcchHHHHHhc-------CceEEEecCCC----CCcEEEccCCCCC------------------------
Q 027441 140 SPSLVIADFGCGDARLAKSVK-------NKVFSFDLVSN----DPSVIACDMSNTP------------------------ 184 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-------~~v~gvDis~~----~~~~~~~d~~~lp------------------------ 184 (223)
.++.+|||||||+|.++..++ .+|+|+|+++. ++.++.+|+...+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 100 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKE 100 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHHHh
Confidence 467899999999999988775 36999999983 6788999998876
Q ss_pred -CCCCceeEEEEcccccCC-----CHH-------HHHHHHHHccCCCCEEEc
Q 027441 185 -LNSSSVDVAVFCLSLMGI-----NFP-------NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 185 -~~~~sfD~Vi~~~~l~~~-----d~~-------~~l~e~~rvLkpgG~lvi 223 (223)
+++.+||+|++..++++. +.. .++.++.++|+|||.|++
T Consensus 101 ~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 101 ILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 567899999999888874 222 378999999999999975
No 75
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=6.5e-15 Score=121.18 Aligned_cols=85 Identities=18% Similarity=0.180 Sum_probs=72.2
Q ss_pred cCCCCeEEEECCcchHHHHHhc---CceEEEecCC------------CCCcEEEccCCCCCCCC-----CceeEEEEccc
Q 027441 139 HSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------NDPSVIACDMSNTPLNS-----SSVDVAVFCLS 198 (223)
Q Consensus 139 ~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~------------~~~~~~~~d~~~lp~~~-----~sfD~Vi~~~~ 198 (223)
..++.+|||||||+|.++..++ .+|+|+|+++ .++.++++|+.++++.. ..||+|++..+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 3467899999999999999887 5899999997 36789999998866432 24999999999
Q ss_pred ccCCC---HHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGIN---FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d---~~~~l~e~~rvLkpgG~lvi 223 (223)
+||++ +..++.++.++|+|||.|+|
T Consensus 134 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i 161 (245)
T 3ggd_A 134 FHHIPVEKRELLGQSLRILLGKQGAMYL 161 (245)
T ss_dssp STTSCGGGHHHHHHHHHHHHTTTCEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 99994 56999999999999998764
No 76
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.53 E-value=1.2e-14 Score=124.43 Aligned_cols=81 Identities=16% Similarity=0.339 Sum_probs=71.0
Q ss_pred CCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l 199 (223)
.++.+|||||||+|.++..++ .+|+|+|+|+ .++.+..+|+..+| ++||+|++..++
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l 165 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAF 165 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCG
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChH
Confidence 367899999999999888776 4799999996 24778889988775 789999999999
Q ss_pred cCC---CHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|+ ++..++.++.++|+|||.|+|
T Consensus 166 ~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 166 EHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp GGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred HhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 999 678999999999999999985
No 77
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.53 E-value=1e-14 Score=123.87 Aligned_cols=91 Identities=16% Similarity=0.187 Sum_probs=74.6
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC------------------CCCcEEEccCCCCCCCCC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~------------------~~~~~~~~d~~~lp~~~~ 188 (223)
..++..+.. +..+|||||||+|.++..++ .+|+|+|+++ .++.++++|+..+|+ ++
T Consensus 73 ~~~~~~~~~--~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 149 (299)
T 3g2m_A 73 REFATRTGP--VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DK 149 (299)
T ss_dssp HHHHHHHCC--CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SC
T ss_pred HHHHHhhCC--CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CC
Confidence 445555543 34599999999999999887 4799999996 247799999999988 78
Q ss_pred ceeEEEEc-ccccCCC---HHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFC-LSLMGIN---FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~-~~l~~~d---~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++. .+++|++ ...+|.++.++|+|||.|+|
T Consensus 150 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 188 (299)
T 3g2m_A 150 RFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLL 188 (299)
T ss_dssp CEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 99999865 5677775 47999999999999999986
No 78
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.53 E-value=2.6e-14 Score=110.48 Aligned_cols=92 Identities=18% Similarity=0.231 Sum_probs=75.5
Q ss_pred HHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----CCCcEEEccCCCCC--------CCCCceeEE
Q 027441 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----NDPSVIACDMSNTP--------LNSSSVDVA 193 (223)
Q Consensus 132 i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----~~~~~~~~d~~~lp--------~~~~sfD~V 193 (223)
++..+....++.+|||+|||+|.++..++ .+|+|+|+++ .++.+..+|+...+ +++++||+|
T Consensus 13 ~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i 92 (180)
T 1ej0_A 13 IQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVV 92 (180)
T ss_dssp HHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccccCcEEEEEcccccchhhhhhhccCCCCceeEE
Confidence 34444333467899999999999887765 4799999998 45678889998877 778899999
Q ss_pred EEcccccCC-CH-----------HHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLMGI-NF-----------PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~~~-d~-----------~~~l~e~~rvLkpgG~lvi 223 (223)
++..+++++ +. ..++.++.++|+|||.+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (180)
T 1ej0_A 93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV 134 (180)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 999998877 44 6899999999999999975
No 79
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.53 E-value=6.1e-15 Score=125.75 Aligned_cols=83 Identities=14% Similarity=0.092 Sum_probs=73.4
Q ss_pred CCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~ 197 (223)
.++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+|++ ++||+|++..
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 467899999999999999884 3799999996 1278899999999987 9999999999
Q ss_pred cccCC-CHHH---HHHHHHHccCCCCEEEc
Q 027441 198 SLMGI-NFPN---YLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~-d~~~---~l~e~~rvLkpgG~lvi 223 (223)
+++|+ ++.. ++.++.++|+|||.|+|
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99999 6664 79999999999999985
No 80
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.53 E-value=3.2e-14 Score=117.40 Aligned_cols=82 Identities=16% Similarity=0.278 Sum_probs=69.2
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEEEEcc-cccCC
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCL-SLMGI 202 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~-~l~~~ 202 (223)
++.+|||||||+|.++..++ .+|+|+|+|+ .++.++.+|+..++++ ++||+|++.. +++|+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~ 119 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYF 119 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGS
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcC
Confidence 56899999999999998887 4799999996 2578899999888875 6899999875 44555
Q ss_pred ---CHHHHHHHHHHccCCCCEEEc
Q 027441 203 ---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 203 ---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+...++.++.++|+|||.|++
T Consensus 120 ~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 120 DEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 456999999999999999975
No 81
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.52 E-value=1.9e-14 Score=113.52 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=65.3
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcEEEccCCCCC-CCCCceeEEEEcc-cc
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP-LNSSSVDVAVFCL-SL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp-~~~~sfD~Vi~~~-~l 199 (223)
.++.+|||+|||+|.++..++ .+|+|+|+++ .++.++..++..++ +.+++||+|++.. .+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 367899999999999999987 5899999997 35677787776643 4578899999874 33
Q ss_pred cC-------C--CHHHHHHHHHHccCCCCEEEc
Q 027441 200 MG-------I--NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~-------~--d~~~~l~e~~rvLkpgG~lvi 223 (223)
++ . +...++.++.++|+|||.|++
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 133 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAI 133 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEE
Confidence 32 1 334889999999999999975
No 82
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.52 E-value=5.9e-15 Score=126.40 Aligned_cols=83 Identities=7% Similarity=0.078 Sum_probs=65.2
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCCC------------C---------CcEEEccC------CCC--CCCC
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVSN------------D---------PSVIACDM------SNT--PLNS 187 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~~------------~---------~~~~~~d~------~~l--p~~~ 187 (223)
++.+|||||||+|..+..++ .+|+|+|+|+. . +.+.+.|+ .++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 56899999999997554333 47999999971 1 34667776 222 3567
Q ss_pred CceeEEEEcccccCC----CHHHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMGI----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~----d~~~~l~e~~rvLkpgG~lvi 223 (223)
++||+|+|.+++||+ +...+|.++.++|+|||+|++
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 899999999999975 557999999999999999985
No 83
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.52 E-value=1.3e-14 Score=115.15 Aligned_cols=94 Identities=10% Similarity=0.045 Sum_probs=75.9
Q ss_pred HHHHHHHhcc--CCCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCC--CC
Q 027441 130 NIIVKWLKDH--SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTP--LN 186 (223)
Q Consensus 130 ~~i~~~l~~~--~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp--~~ 186 (223)
+.+++.+... .++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+..++ ++
T Consensus 31 ~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 110 (189)
T 3p9n_A 31 ESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGT 110 (189)
T ss_dssp HHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCC
T ss_pred HHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhcc
Confidence 3445555432 367899999999999988665 4799999997 36788999987754 45
Q ss_pred CCceeEEEEcccccCC--CHHHHHHHHHH--ccCCCCEEEc
Q 027441 187 SSSVDVAVFCLSLMGI--NFPNYLQEAQR--VLKPRGEEQI 223 (223)
Q Consensus 187 ~~sfD~Vi~~~~l~~~--d~~~~l~e~~r--vLkpgG~lvi 223 (223)
+++||+|++...+++. +...++.++.+ +|+|||+|+|
T Consensus 111 ~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~ 151 (189)
T 3p9n_A 111 TSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVV 151 (189)
T ss_dssp SSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEE
T ss_pred CCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEE
Confidence 7899999999998875 67899999999 9999999985
No 84
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.50 E-value=1.2e-14 Score=118.71 Aligned_cols=78 Identities=13% Similarity=0.199 Sum_probs=69.2
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCC----------CCCcEEEccC-CCCCCC-CCceeEEEEcccccCCCH
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDM-SNTPLN-SSSVDVAVFCLSLMGINF 204 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------~~~~~~~~d~-~~lp~~-~~sfD~Vi~~~~l~~~d~ 204 (223)
.++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+ ..+|++ +++||+|++. .++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-----~~~ 121 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-----RGP 121 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-----SCC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-----CCH
Confidence 367899999999999999988 4799999997 4789999999 678888 8999999987 356
Q ss_pred HHHHHHHHHccCCCCEEE
Q 027441 205 PNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 205 ~~~l~e~~rvLkpgG~lv 222 (223)
..++.++.++|+|||.|+
T Consensus 122 ~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 122 TSVILRLPELAAPDAHFL 139 (226)
T ss_dssp SGGGGGHHHHEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEE
Confidence 789999999999999986
No 85
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.50 E-value=7.7e-14 Score=109.35 Aligned_cols=95 Identities=17% Similarity=0.219 Sum_probs=76.8
Q ss_pred chHHHHHHHHhcc-CCCCeEEEECCcchHHHHHhcC--ceEEEecCC------CCCcEEEccCCCCCCCCCceeEEEEcc
Q 027441 127 LPVNIIVKWLKDH-SPSLVIADFGCGDARLAKSVKN--KVFSFDLVS------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (223)
Q Consensus 127 ~~~~~i~~~l~~~-~~~~~ILDiGcG~G~~a~~la~--~v~gvDis~------~~~~~~~~d~~~lp~~~~sfD~Vi~~~ 197 (223)
.....+++.+... .++.+|||+|||+|.++..++. +|+|+|+++ .++.++.+|+.. ++++++||+|++..
T Consensus 8 ~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~~~~~~~~~~d~~~-~~~~~~fD~i~~n~ 86 (170)
T 3q87_B 8 EDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALESHRGGNLVRADLLC-SINQESVDVVVFNP 86 (170)
T ss_dssp HHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHTCSSSCEEECSTTT-TBCGGGCSEEEECC
T ss_pred ccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhcccCCeEEECChhh-hcccCCCCEEEECC
Confidence 3345566666541 2677999999999999999884 699999997 578899999987 66678999999999
Q ss_pred cccCC-CH---------HHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGI-NF---------PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~-d~---------~~~l~e~~rvLkpgG~lvi 223 (223)
.+++. +. ..++.++.+.| |||.|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~ 121 (170)
T 3q87_B 87 PYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYL 121 (170)
T ss_dssp CCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEE
T ss_pred CCccCCccccccCCcchHHHHHHHHhhC-CCCEEEE
Confidence 98875 32 58889999999 9999975
No 86
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.50 E-value=5.6e-14 Score=122.51 Aligned_cols=83 Identities=19% Similarity=0.208 Sum_probs=72.1
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEcccccC
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~ 201 (223)
++.+|||||||+|.++..++ .+|+|+|+|+ .++.++.+|+..+++++++||+|++..+.++
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~ 145 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYC 145 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBT
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccccc
Confidence 67899999999999998887 3899999996 2378999999999999999999999776443
Q ss_pred C----CHHHHHHHHHHccCCCCEEEc
Q 027441 202 I----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~----d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ +...++.++.|+|+|||+|++
T Consensus 146 l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 146 LFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 3 778999999999999999873
No 87
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.50 E-value=9.2e-14 Score=111.40 Aligned_cols=91 Identities=15% Similarity=0.201 Sum_probs=74.2
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCCCCCCCc
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSS 189 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~s 189 (223)
..++..+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+.........
T Consensus 30 ~~~l~~l~~~-~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 108 (204)
T 3e05_A 30 AVTLSKLRLQ-DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPD 108 (204)
T ss_dssp HHHHHHTTCC-TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCC
T ss_pred HHHHHHcCCC-CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCC
Confidence 3445555443 67899999999999988886 4799999997 3577888998665444478
Q ss_pred eeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
||+|++..+++ ++..++.++.++|+|||.|++
T Consensus 109 ~D~i~~~~~~~--~~~~~l~~~~~~LkpgG~l~~ 140 (204)
T 3e05_A 109 PDRVFIGGSGG--MLEEIIDAVDRRLKSEGVIVL 140 (204)
T ss_dssp CSEEEESCCTT--CHHHHHHHHHHHCCTTCEEEE
T ss_pred CCEEEECCCCc--CHHHHHHHHHHhcCCCeEEEE
Confidence 99999998876 888999999999999999985
No 88
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.49 E-value=2.9e-14 Score=121.91 Aligned_cols=83 Identities=20% Similarity=0.220 Sum_probs=70.3
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCCC----------------------CCcEEEccCCCCC----CC--CC
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVSN----------------------DPSVIACDMSNTP----LN--SS 188 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~~----------------------~~~~~~~d~~~lp----~~--~~ 188 (223)
++.+|||||||+|.++..++ .+|+|+|+++. ++.++++|+..++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 56899999999999888776 47999999961 4678999998876 54 45
Q ss_pred ceeEEEEcccccCC--C---HHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGI--N---FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~--d---~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++..++||+ + +..+|.++.++|+|||.|++
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 99999999999987 4 35999999999999999985
No 89
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.49 E-value=8.2e-14 Score=109.56 Aligned_cols=93 Identities=16% Similarity=0.242 Sum_probs=76.6
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CC--CcEEEccCCCCCCCCC
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------ND--PSVIACDMSNTPLNSS 188 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~--~~~~~~d~~~lp~~~~ 188 (223)
...+++.+... ++.+|||+|||+|.++..++ .+|+|+|+++ .+ +.++.+|+.. +++++
T Consensus 41 ~~~l~~~~~~~-~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~ 118 (194)
T 1dus_A 41 TKILVENVVVD-KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDR 118 (194)
T ss_dssp HHHHHHHCCCC-TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTS
T ss_pred HHHHHHHcccC-CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccC
Confidence 34566666544 67899999999999998887 5799999996 23 7888899877 44577
Q ss_pred ceeEEEEcccccCC--CHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGI--NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~--d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++...++|. +...++.++.++|+|||.|++
T Consensus 119 ~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 155 (194)
T 1dus_A 119 KYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWV 155 (194)
T ss_dssp CEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEE
Confidence 89999999998874 677999999999999999985
No 90
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.49 E-value=4e-14 Score=114.97 Aligned_cols=82 Identities=15% Similarity=0.157 Sum_probs=64.6
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------CCCcEEEccCCCC----CCCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------NDPSVIACDMSNT----PLNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------~~~~~~~~d~~~l----p~~~~sfD~Vi~~~ 197 (223)
.++.+|||||||+|.++..++ .+|+|+|+|+ .++.++.+|+... ++. ++||+|++..
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~ 134 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQDI 134 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEECC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEec
Confidence 367899999999999888765 4799999996 3566778888763 554 7899999873
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.++.+...++.++.|+|||||.|+|
T Consensus 135 -~~~~~~~~~l~~~~r~LkpgG~l~i 159 (210)
T 1nt2_A 135 -AQKNQIEILKANAEFFLKEKGEVVI 159 (210)
T ss_dssp -CSTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred -cChhHHHHHHHHHHHHhCCCCEEEE
Confidence 2332344669999999999999985
No 91
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.49 E-value=8.2e-14 Score=111.55 Aligned_cols=92 Identities=16% Similarity=0.193 Sum_probs=71.1
Q ss_pred HHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC----CCCcEEEccCCCCCCC-----------CCceeEE
Q 027441 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----NDPSVIACDMSNTPLN-----------SSSVDVA 193 (223)
Q Consensus 132 i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----~~~~~~~~d~~~lp~~-----------~~sfD~V 193 (223)
|.+.+....++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+.+.+.. .++||+|
T Consensus 16 i~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~V 95 (191)
T 3dou_A 16 LLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDV 95 (191)
T ss_dssp HHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEE
T ss_pred HHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEE
Confidence 33333333478999999999999999998 5799999998 4788999999886521 1489999
Q ss_pred EEcccccCC-----C-------HHHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLMGI-----N-------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~~~-----d-------~~~~l~e~~rvLkpgG~lvi 223 (223)
++....... | ...++..+.++|+|||.|++
T Consensus 96 lsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~ 137 (191)
T 3dou_A 96 VSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLL 137 (191)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 997654422 1 23788899999999999985
No 92
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.48 E-value=1.4e-14 Score=119.99 Aligned_cols=83 Identities=19% Similarity=0.331 Sum_probs=70.2
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC------------CC--------------------------------
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS------------ND-------------------------------- 172 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~------------~~-------------------------------- 172 (223)
++.+|||||||+|.++..++ .+|+|+|+|+ ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 56799999999999988876 2799999996 11
Q ss_pred C-cEEEccCCCCC-CCC---CceeEEEEccccc----CC-CHHHHHHHHHHccCCCCEEEc
Q 027441 173 P-SVIACDMSNTP-LNS---SSVDVAVFCLSLM----GI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 173 ~-~~~~~d~~~lp-~~~---~sfD~Vi~~~~l~----~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ .+..+|+...+ +++ ++||+|++..+++ ++ ++..+|.++.++|+|||.|++
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 196 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVM 196 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Confidence 5 78889998754 355 8999999999999 55 677999999999999999985
No 93
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.48 E-value=1.6e-13 Score=119.25 Aligned_cols=89 Identities=19% Similarity=0.197 Sum_probs=71.0
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------CCCcEEEccCCCCCCCCCceeE
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDV 192 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------~~~~~~~~d~~~lp~~~~sfD~ 192 (223)
.+++.+. ..+..+|||||||+|.++..++ .+++++|+++ .++.++.+|+. .+++ +||+
T Consensus 175 ~~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~ 250 (348)
T 3lst_A 175 ILARAGD-FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADV 250 (348)
T ss_dssp HHHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSE
T ss_pred HHHHhCC-ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCC-CCCC--CCcE
Confidence 4444443 2357899999999999998886 2678899753 35788899996 4444 8999
Q ss_pred EEEcccccCC-CH--HHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGI-NF--PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~-d~--~~~l~e~~rvLkpgG~lvi 223 (223)
|++..++||+ +. ..+|.++.++|+|||.|+|
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i 284 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLV 284 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEE
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 9999999998 44 4999999999999999975
No 94
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.47 E-value=3.1e-14 Score=115.17 Aligned_cols=90 Identities=19% Similarity=0.213 Sum_probs=71.1
Q ss_pred HHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCCC-------------------CCcEEEccCCCCCCCC
Q 027441 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN-------------------DPSVIACDMSNTPLNS 187 (223)
Q Consensus 132 i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~~-------------------~~~~~~~d~~~lp~~~ 187 (223)
.+..+... ++.+|||||||+|.++..++ .+|+|+|+|+. ++.++++|+.++|+.+
T Consensus 19 ~~~~l~~~-~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~ 97 (218)
T 3mq2_A 19 EFEQLRSQ-YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLS 97 (218)
T ss_dssp HHHHHHTT-SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCC
T ss_pred HHHHhhcc-CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCC
Confidence 34444443 67899999999999998887 47999999972 5678899999999887
Q ss_pred CceeEEEEcc---ccc--CC-CHHHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCL---SLM--GI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~---~l~--~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
++ |.|+... .++ |+ ++..++.++.++|+|||.|+|
T Consensus 98 ~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 98 GV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp CE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred CC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 76 7776333 222 44 678999999999999999985
No 95
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.47 E-value=1.6e-13 Score=115.78 Aligned_cols=93 Identities=14% Similarity=0.163 Sum_probs=73.3
Q ss_pred HHHHHHhccCCCCeEEEECCcc---hHHHHHhc-----CceEEEecCC-------------CCCcEEEccCCCCC-----
Q 027441 131 IIVKWLKDHSPSLVIADFGCGD---ARLAKSVK-----NKVFSFDLVS-------------NDPSVIACDMSNTP----- 184 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~---G~~a~~la-----~~v~gvDis~-------------~~~~~~~~d~~~lp----- 184 (223)
.+..++.......+|||||||+ |.++..+. .+|+++|+|+ .++.++.+|+.+.+
T Consensus 67 ~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~ 146 (274)
T 2qe6_A 67 RGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNH 146 (274)
T ss_dssp HHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHS
T ss_pred HHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhcc
Confidence 3444554222457999999999 98766553 5899999996 36788999997631
Q ss_pred ------CCCCceeEEEEcccccCC-C--HHHHHHHHHHccCCCCEEEc
Q 027441 185 ------LNSSSVDVAVFCLSLMGI-N--FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 185 ------~~~~sfD~Vi~~~~l~~~-d--~~~~l~e~~rvLkpgG~lvi 223 (223)
++..+||+|++..++||+ + +..+|.++.++|+|||+|+|
T Consensus 147 ~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i 194 (274)
T 2qe6_A 147 PDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFM 194 (274)
T ss_dssp HHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred chhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEE
Confidence 333589999999999999 4 78999999999999999985
No 96
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.47 E-value=2.9e-13 Score=114.38 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=67.2
Q ss_pred CCCeEEEECCcchH----HHHHhc---------CceEEEecCC--------C----------------------------
Q 027441 141 PSLVIADFGCGDAR----LAKSVK---------NKVFSFDLVS--------N---------------------------- 171 (223)
Q Consensus 141 ~~~~ILDiGcG~G~----~a~~la---------~~v~gvDis~--------~---------------------------- 171 (223)
+..+|||+|||||. ++..|+ .+|+|+|+|+ .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 444443 1699999996 0
Q ss_pred ----------CCcEEEccCCCCCCC-CCceeEEEEcccccCCCHH---HHHHHHHHccCCCCEEEc
Q 027441 172 ----------DPSVIACDMSNTPLN-SSSVDVAVFCLSLMGINFP---NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 172 ----------~~~~~~~d~~~lp~~-~~sfD~Vi~~~~l~~~d~~---~~l~e~~rvLkpgG~lvi 223 (223)
++.|..+|+...|++ .+.||+|+|..+++|++.+ .++..++++|+|||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 255677888876665 5789999999999999654 999999999999999985
No 97
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.47 E-value=1.5e-13 Score=119.47 Aligned_cols=83 Identities=22% Similarity=0.257 Sum_probs=71.6
Q ss_pred CCCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEccc--
Q 027441 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLS-- 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~-- 198 (223)
.++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++++||+|++..+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGY 142 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBT
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchh
Confidence 367899999999999988886 3799999996 3578899999999998899999998773
Q ss_pred -ccCC-CHHHHHHHHHHccCCCCEEE
Q 027441 199 -LMGI-NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 199 -l~~~-d~~~~l~e~~rvLkpgG~lv 222 (223)
+.|. +...++.++.++|+|||.|+
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 4455 56789999999999999987
No 98
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.46 E-value=1.2e-13 Score=116.34 Aligned_cols=81 Identities=12% Similarity=0.167 Sum_probs=66.3
Q ss_pred CCCCeEEEECCcchHHHHHhc--CceEEEecCCC----------------CCcEE--EccCCCCCCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK--NKVFSFDLVSN----------------DPSVI--ACDMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la--~~v~gvDis~~----------------~~~~~--~~d~~~lp~~~~sfD~Vi~~~~l 199 (223)
.++.+|||||||+|.++..++ .+|+|+|+++. ++.++ .+|+..+| +.+||+|+|..+
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~- 149 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG- 149 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-
T ss_pred CCCCEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-
Confidence 467899999999999999887 58999999973 35667 78888876 689999999887
Q ss_pred cCC-CH----H---HHHHHHHHccCCCC--EEEc
Q 027441 200 MGI-NF----P---NYLQEAQRVLKPRG--EEQI 223 (223)
Q Consensus 200 ~~~-d~----~---~~l~e~~rvLkpgG--~lvi 223 (223)
++. ++ . .+|.++.++|+||| .|++
T Consensus 150 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 150 ESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 543 32 2 38899999999999 8875
No 99
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.46 E-value=8e-14 Score=108.69 Aligned_cols=88 Identities=16% Similarity=0.174 Sum_probs=68.7
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------C-CCcEEEccCCC-CCCCCC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------N-DPSVIACDMSN-TPLNSS 188 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~-~~~~~~~d~~~-lp~~~~ 188 (223)
.++..+... ++.+|||||||+|.++..++ .+|+|+|+++ . ++ ++.+|+.. ++..++
T Consensus 16 ~~~~~~~~~-~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 16 LAISALAPK-PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPD 93 (178)
T ss_dssp HHHHHHCCC-TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCS
T ss_pred HHHHHhccc-CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCC
Confidence 445555433 67899999999999998876 3699999997 1 45 67777643 343338
Q ss_pred ceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++..+++| ..++.++.++|+|||.|++
T Consensus 94 ~~D~i~~~~~~~~---~~~l~~~~~~L~~gG~l~~ 125 (178)
T 3hm2_A 94 NPDVIFIGGGLTA---PGVFAAAWKRLPVGGRLVA 125 (178)
T ss_dssp CCSEEEECC-TTC---TTHHHHHHHTCCTTCEEEE
T ss_pred CCCEEEECCcccH---HHHHHHHHHhcCCCCEEEE
Confidence 8999999999988 8899999999999999985
No 100
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.46 E-value=9.3e-14 Score=111.64 Aligned_cols=89 Identities=15% Similarity=0.107 Sum_probs=73.2
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcEEEccCCCCCCCCCce
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSV 190 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sf 190 (223)
...++..+... ++.+|||||||+|.++..++ .+|+++|+++ .++.+..+|+...+..+++|
T Consensus 66 ~~~~~~~l~~~-~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (210)
T 3lbf_A 66 VARMTELLELT-PQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF 144 (210)
T ss_dssp HHHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHHHHHhcCCC-CCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence 34455555443 77899999999999998887 6899999996 35788899998876667899
Q ss_pred eEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 191 DVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 191 D~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
|+|++..+++|+.. ++.++|+|||+|++
T Consensus 145 D~i~~~~~~~~~~~-----~~~~~L~pgG~lv~ 172 (210)
T 3lbf_A 145 DAIIVTAAPPEIPT-----ALMTQLDEGGILVL 172 (210)
T ss_dssp EEEEESSBCSSCCT-----HHHHTEEEEEEEEE
T ss_pred cEEEEccchhhhhH-----HHHHhcccCcEEEE
Confidence 99999999999843 58999999999985
No 101
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.46 E-value=1.4e-13 Score=120.55 Aligned_cols=90 Identities=18% Similarity=0.244 Sum_probs=71.5
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC--------CCCcEEEccCCCCCCCCCceeEEEEcc
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------~~~~~~~~d~~~lp~~~~sfD~Vi~~~ 197 (223)
.++..+....+..+|||||||+|.++..++ ..++++|+.. .++.++.+|+.. +++. ||+|++..
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~~--~D~v~~~~ 275 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFA-SVPQ--GDAMILKA 275 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCC--EEEEEEES
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCccc-CCCC--CCEEEEec
Confidence 344443323356899999999999998887 3577889821 457888999977 6664 99999999
Q ss_pred cccCC-CHH--HHHHHHHHccCCCCEEEc
Q 027441 198 SLMGI-NFP--NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~-d~~--~~l~e~~rvLkpgG~lvi 223 (223)
++||+ +.. .+|.++.++|+|||.|+|
T Consensus 276 ~lh~~~d~~~~~~l~~~~~~L~pgG~l~i 304 (372)
T 1fp1_D 276 VCHNWSDEKCIEFLSNCHKALSPNGKVII 304 (372)
T ss_dssp SGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 99998 555 999999999999999985
No 102
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.46 E-value=1.2e-13 Score=113.79 Aligned_cols=80 Identities=14% Similarity=0.072 Sum_probs=68.3
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCCCCC---CCceeEEEEcc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLN---SSSVDVAVFCL 197 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~lp~~---~~sfD~Vi~~~ 197 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+.++++. +++||+|++..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 56899999999999888776 4799999997 3678899999887754 67999999876
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ .++..++.++.++|+|||.|++
T Consensus 150 ~---~~~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 150 V---ARLSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp C---SCHHHHHHHHGGGEEEEEEEEE
T ss_pred c---CCHHHHHHHHHHhcCCCCEEEE
Confidence 3 3788999999999999999975
No 103
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.45 E-value=1.7e-13 Score=108.69 Aligned_cols=84 Identities=18% Similarity=0.281 Sum_probs=66.6
Q ss_pred CCCCeEEEECCcchHHHHHhc--------------CceEEEecCCC----CCcEE-EccCCCCC--------CCCCceeE
Q 027441 140 SPSLVIADFGCGDARLAKSVK--------------NKVFSFDLVSN----DPSVI-ACDMSNTP--------LNSSSVDV 192 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la--------------~~v~gvDis~~----~~~~~-~~d~~~lp--------~~~~sfD~ 192 (223)
.++.+|||||||+|.++..++ .+|+|+|+++. ++.++ .+|+...+ +++.+||+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~ 100 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADV 100 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGGCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCCCCcE
Confidence 467899999999999888775 35999999983 46777 88876643 34568999
Q ss_pred EEEcccccCC-----CH-------HHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGI-----NF-------PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~-----d~-------~~~l~e~~rvLkpgG~lvi 223 (223)
|++..++++. +. ..++.++.++|+|||.|++
T Consensus 101 V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (196)
T 2nyu_A 101 ILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLC 143 (196)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 9997766543 33 4789999999999999985
No 104
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.45 E-value=3.2e-13 Score=116.69 Aligned_cols=82 Identities=17% Similarity=0.195 Sum_probs=70.5
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEcccccC
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~ 201 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++++||+|++..+.++
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 117 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYF 117 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTT
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhh
Confidence 67899999999999988876 3799999995 2477899999999888889999999865443
Q ss_pred ---C-CHHHHHHHHHHccCCCCEEE
Q 027441 202 ---I-NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 202 ---~-d~~~~l~e~~rvLkpgG~lv 222 (223)
. ++..++.++.++|+|||.|+
T Consensus 118 l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 118 LLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp BSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred cccHHHHHHHHHHHHhhcCCCeEEE
Confidence 3 57799999999999999987
No 105
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.45 E-value=3.9e-14 Score=125.47 Aligned_cols=93 Identities=13% Similarity=0.157 Sum_probs=74.8
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC------------------------CCCcEEEccC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS------------------------NDPSVIACDM 180 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~------------------------~~~~~~~~d~ 180 (223)
..+++.+.. .++.+|||||||+|.++..++ .+|+|+|+++ .++.|+.+|+
T Consensus 163 ~~il~~l~l-~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~ 241 (438)
T 3uwp_A 163 AQMIDEIKM-TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF 241 (438)
T ss_dssp HHHHHHHCC-CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT
T ss_pred HHHHHhcCC-CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc
Confidence 445555543 378999999999999988776 2599999995 3578899999
Q ss_pred CCCCCCC--CceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 181 SNTPLNS--SSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 181 ~~lp~~~--~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.++|+.+ ..||+|++...+++-+....|.++.|+|||||.|++
T Consensus 242 ~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 242 LSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp TSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEE
T ss_pred cCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEE
Confidence 9988754 479999988776444777999999999999999985
No 106
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.45 E-value=2.3e-13 Score=109.76 Aligned_cols=88 Identities=7% Similarity=0.022 Sum_probs=70.6
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------C-CCcEEEccCCCCCCCCCcee
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------N-DPSVIACDMSNTPLNSSSVD 191 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~-~~~~~~~d~~~lp~~~~sfD 191 (223)
.++..+... ++.+|||||||+|.++..++ .+|+|+|+++ . ++.++.+|+.........||
T Consensus 46 ~~l~~l~~~-~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D 124 (204)
T 3njr_A 46 LTLAALAPR-RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPE 124 (204)
T ss_dssp HHHHHHCCC-TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCS
T ss_pred HHHHhcCCC-CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCC
Confidence 445555443 67899999999999988887 5899999997 2 67888999987433345799
Q ss_pred EEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|++..++ +.. ++.++.++|+|||.|++
T Consensus 125 ~v~~~~~~---~~~-~l~~~~~~LkpgG~lv~ 152 (204)
T 3njr_A 125 AVFIGGGG---SQA-LYDRLWEWLAPGTRIVA 152 (204)
T ss_dssp EEEECSCC---CHH-HHHHHHHHSCTTCEEEE
T ss_pred EEEECCcc---cHH-HHHHHHHhcCCCcEEEE
Confidence 99987744 667 99999999999999985
No 107
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.45 E-value=2e-13 Score=110.38 Aligned_cols=83 Identities=14% Similarity=0.255 Sum_probs=70.5
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCCC--CCCCceeEEEEccc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTP--LNSSSVDVAVFCLS 198 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~lp--~~~~sfD~Vi~~~~ 198 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++ +++++||+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 56899999999999988876 4799999996 36789999998887 77889999999877
Q ss_pred ccCC---------CHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGI---------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~---------d~~~~l~e~~rvLkpgG~lvi 223 (223)
..|. ....++.++.++|+|||.|+|
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHF 154 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEE
Confidence 5443 236899999999999999975
No 108
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.45 E-value=2.8e-13 Score=128.27 Aligned_cols=93 Identities=14% Similarity=0.310 Sum_probs=78.0
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC---------------------CCCcEEEccCC
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------------NDPSVIACDMS 181 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------------~~~~~~~~d~~ 181 (223)
.+.+++.+... ++.+|||||||+|.++..|+ .+|+|+|+++ .++.++++|+.
T Consensus 710 le~LLelL~~~-~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~ 788 (950)
T 3htx_A 710 VEYALKHIRES-SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL 788 (950)
T ss_dssp HHHHHHHHHHS-CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT
T ss_pred HHHHHHHhccc-CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH
Confidence 34556666655 77899999999999999987 2699999996 13678999999
Q ss_pred CCCCCCCceeEEEEcccccCCCHH---HHHHHHHHccCCCCEEEc
Q 027441 182 NTPLNSSSVDVAVFCLSLMGINFP---NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 182 ~lp~~~~sfD~Vi~~~~l~~~d~~---~~l~e~~rvLkpgG~lvi 223 (223)
.+|+.+++||+|++..+++|++.+ .++.++.++|+|| .|+|
T Consensus 789 dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LII 832 (950)
T 3htx_A 789 EFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIV 832 (950)
T ss_dssp SCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEE
T ss_pred hCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEE
Confidence 999999999999999999999533 5899999999999 6553
No 109
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.44 E-value=2.1e-13 Score=120.08 Aligned_cols=83 Identities=23% Similarity=0.233 Sum_probs=70.7
Q ss_pred CCCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEccccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~ 200 (223)
.++.+|||||||+|.++..++ .+|+|+|+++ ..+.++.+|+..++++ ++||+|++..+.+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGY 140 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBT
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhh
Confidence 367899999999999998887 3899999995 2378899999998877 8899999977555
Q ss_pred CC----CHHHHHHHHHHccCCCCEEEc
Q 027441 201 GI----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~----d~~~~l~e~~rvLkpgG~lvi 223 (223)
++ ++..++.++.++|+|||+|++
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 54 477899999999999999975
No 110
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.44 E-value=8.2e-14 Score=123.00 Aligned_cols=82 Identities=12% Similarity=0.122 Sum_probs=68.4
Q ss_pred CCCeEEEECCc------chHHHHHhc------CceEEEecCC------CCCcEEEccCCCCCCC------CCceeEEEEc
Q 027441 141 PSLVIADFGCG------DARLAKSVK------NKVFSFDLVS------NDPSVIACDMSNTPLN------SSSVDVAVFC 196 (223)
Q Consensus 141 ~~~~ILDiGcG------~G~~a~~la------~~v~gvDis~------~~~~~~~~d~~~lp~~------~~sfD~Vi~~ 196 (223)
+..+||||||| +|..+..++ .+|+|+|+++ .++.|+++|+.++|+. +++||+|++.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisd 295 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDD 295 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhhhcccCCccEEEEC
Confidence 56899999999 655444443 4799999998 4788999999998887 7899999987
Q ss_pred ccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 197 LSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
.+ |+. ++..+|.++.|+|||||+|+|
T Consensus 296 gs-H~~~d~~~aL~el~rvLKPGGvlVi 322 (419)
T 3sso_A 296 GS-HINAHVRTSFAALFPHVRPGGLYVI 322 (419)
T ss_dssp SC-CCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred Cc-ccchhHHHHHHHHHHhcCCCeEEEE
Confidence 54 555 788999999999999999986
No 111
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.44 E-value=3.2e-13 Score=117.59 Aligned_cols=91 Identities=20% Similarity=0.287 Sum_probs=75.2
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCCCCCCcee
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVD 191 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD 191 (223)
.+++.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++++ ++||
T Consensus 41 ~i~~~l~~~-~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D 118 (348)
T 2y1w_A 41 AILQNHTDF-KDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVD 118 (348)
T ss_dssp HHHHTGGGT-TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEE
T ss_pred HHHhccccC-CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-Ccee
Confidence 444544443 67899999999999998876 4899999996 3578899999988775 6799
Q ss_pred EEEEcccccCC---CHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|++..+++|+ +...++.++.++|+|||.|++
T Consensus 119 ~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 119 IIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp EEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred EEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 99999888876 456888899999999999974
No 112
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.44 E-value=3.9e-13 Score=118.30 Aligned_cols=81 Identities=17% Similarity=0.179 Sum_probs=68.0
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEccccc-
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM- 200 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~- 200 (223)
++.+|||||||+|.++..++ .+|+|+|.|+ ..+.++.++++.+.++ ..||+||+....+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccc
Confidence 67899999999999988765 4799999986 4578899999998876 6799999854433
Q ss_pred --CC-CHHHHHHHHHHccCCCCEEE
Q 027441 201 --GI-NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 201 --~~-d~~~~l~e~~rvLkpgG~lv 222 (223)
+. ..+.++....|+|+|||.++
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ccccchhhhHHHHHHhhCCCCceEC
Confidence 33 67799999999999999987
No 113
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.44 E-value=1.1e-13 Score=112.41 Aligned_cols=83 Identities=11% Similarity=0.235 Sum_probs=69.2
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCCC--CCCCceeEEEEccc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTP--LNSSSVDVAVFCLS 198 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~lp--~~~~sfD~Vi~~~~ 198 (223)
++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+..++ +++++||.|++.+.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 56899999999999998886 4799999996 36788999998876 77889999988765
Q ss_pred ccCC---------CHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGI---------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~---------d~~~~l~e~~rvLkpgG~lvi 223 (223)
..|. ..+.++.++.++|+|||.|+|
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~ 151 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHF 151 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEE
Confidence 4433 136899999999999999975
No 114
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.44 E-value=1.4e-13 Score=116.41 Aligned_cols=81 Identities=12% Similarity=0.112 Sum_probs=66.0
Q ss_pred CCCCeEEEECCcchHHHHHhc--CceEEEecCCC----------------CCcEE--EccCCCCCCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK--NKVFSFDLVSN----------------DPSVI--ACDMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la--~~v~gvDis~~----------------~~~~~--~~d~~~lp~~~~sfD~Vi~~~~l 199 (223)
.++.+|||||||+|.++..++ .+|+|+|+++. ++.++ .+|+..+| +++||+|+|..+
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~- 157 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG- 157 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC-
T ss_pred CCCCEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC-
Confidence 367899999999999999887 57999999873 35677 78888776 689999999888
Q ss_pred cCC-CH----H---HHHHHHHHccCCCC--EEEc
Q 027441 200 MGI-NF----P---NYLQEAQRVLKPRG--EEQI 223 (223)
Q Consensus 200 ~~~-d~----~---~~l~e~~rvLkpgG--~lvi 223 (223)
++. ++ . .+|.++.++|+||| .|++
T Consensus 158 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 158 ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 543 32 2 47899999999999 8874
No 115
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.43 E-value=7.1e-13 Score=116.14 Aligned_cols=80 Identities=15% Similarity=0.179 Sum_probs=68.8
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEcccc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l 199 (223)
+..+|||||||+|.++..++ .+++++|+ + .++.+..+|+. .|++. .||+|++..++
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 278 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVL 278 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCG
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhh
Confidence 56899999999999998886 37899998 5 35789999998 56655 89999999999
Q ss_pred cCCCHH---HHHHHHHHccCCCCEEEc
Q 027441 200 MGINFP---NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~---~~l~e~~rvLkpgG~lvi 223 (223)
|+++.+ .+|.++.++|+|||.|+|
T Consensus 279 h~~~d~~~~~~L~~~~~~L~pgG~l~i 305 (369)
T 3gwz_A 279 HDWDDDDVVRILRRIATAMKPDSRLLV 305 (369)
T ss_dssp GGSCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 999443 799999999999999986
No 116
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.43 E-value=6.6e-13 Score=116.27 Aligned_cols=90 Identities=17% Similarity=0.204 Sum_probs=72.2
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC--------CCCcEEEccCCCCCCCCCceeEEEEcc
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------~~~~~~~~d~~~lp~~~~sfD~Vi~~~ 197 (223)
.++..+....+..+|||||||+|.++..++ .+++++|+.. .++.++.+|+.. |++.+ |+|++..
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~-~~p~~--D~v~~~~ 267 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFK-EVPSG--DTILMKW 267 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEES
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCC-CCCCC--CEEEehH
Confidence 344443323356899999999999998886 3689999842 468899999987 77755 9999999
Q ss_pred cccCCC---HHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGIN---FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d---~~~~l~e~~rvLkpgG~lvi 223 (223)
++|+++ ...+|.+++++|+|||.|+|
T Consensus 268 vlh~~~d~~~~~~L~~~~~~L~pgG~l~i 296 (364)
T 3p9c_A 268 ILHDWSDQHCATLLKNCYDALPAHGKVVL 296 (364)
T ss_dssp CGGGSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HhccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 999883 34899999999999999975
No 117
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.43 E-value=4.5e-13 Score=117.48 Aligned_cols=80 Identities=18% Similarity=0.206 Sum_probs=67.6
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC--------CCCcEEEccCCCCCCCCCceeEEEEcccccCCC---H
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGIN---F 204 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d---~ 204 (223)
+..+|||||||+|.++..++ .+++++|+.. .++.++.+|+.. |++.+ |+|++..++||++ .
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~ 279 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHC 279 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHH
Confidence 56899999999999998886 3689999832 468899999986 67654 9999999999883 3
Q ss_pred HHHHHHHHHccCCCCEEEc
Q 027441 205 PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 205 ~~~l~e~~rvLkpgG~lvi 223 (223)
..+|.+++++|+|||.|+|
T Consensus 280 ~~~l~~~~~~L~pgG~l~i 298 (368)
T 3reo_A 280 LKLLKNCYAALPDHGKVIV 298 (368)
T ss_dssp HHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHcCCCCEEEE
Confidence 4889999999999999875
No 118
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.43 E-value=1.8e-13 Score=116.61 Aligned_cols=82 Identities=12% Similarity=0.065 Sum_probs=67.6
Q ss_pred ccCCCCeEEEECCcchHHHHH-hc----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEcc
Q 027441 138 DHSPSLVIADFGCGDARLAKS-VK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (223)
Q Consensus 138 ~~~~~~~ILDiGcG~G~~a~~-la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~ 197 (223)
...++.+|||||||+|.++.. ++ .+|+|+|+++ .++.++.+|+..+| +++||+|++..
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a 196 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAA 196 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECT
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECC
Confidence 345789999999999876533 32 6899999997 46789999998876 78999999865
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. .-+...++.++.|+|+|||.|++
T Consensus 197 ~--~~d~~~~l~el~r~LkPGG~Lvv 220 (298)
T 3fpf_A 197 L--AEPKRRVFRNIHRYVDTETRIIY 220 (298)
T ss_dssp T--CSCHHHHHHHHHHHCCTTCEEEE
T ss_pred C--ccCHHHHHHHHHHHcCCCcEEEE
Confidence 4 23888999999999999999985
No 119
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.43 E-value=2.6e-13 Score=119.80 Aligned_cols=83 Identities=14% Similarity=0.180 Sum_probs=73.3
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEEEEcccccC--
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG-- 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~-- 201 (223)
++.+|||+|||+|.++..++ .+|+++|+++ ..+.++.+|+...+.++++||+|++...+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~ 312 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGG 312 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcc
Confidence 56899999999999999887 5899999997 2578899999998877789999999999997
Q ss_pred ---C-CHHHHHHHHHHccCCCCEEEc
Q 027441 202 ---I-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ---~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
. +...++.++.++|+|||.|+|
T Consensus 313 ~~~~~~~~~~l~~~~~~LkpGG~l~i 338 (381)
T 3dmg_A 313 AVILDVAQAFVNVAAARLRPGGVFFL 338 (381)
T ss_dssp SSCCHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccHHHHHHHHHHHHHhcCcCcEEEE
Confidence 2 566999999999999999986
No 120
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.43 E-value=8.8e-13 Score=113.54 Aligned_cols=78 Identities=17% Similarity=0.260 Sum_probs=67.1
Q ss_pred CeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEcccccC
Q 027441 143 LVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~ 201 (223)
.+|||||||+|.++..++ .+++++|+ + .++.++.+|+.. +++ ..||+|++..++||
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccC
Confidence 899999999999988886 36999999 6 247788999877 555 67999999999998
Q ss_pred C-CHH--HHHHHHHHccCCCCEEEc
Q 027441 202 I-NFP--NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~-d~~--~~l~e~~rvLkpgG~lvi 223 (223)
+ +.. .++.++.++|+|||.|+|
T Consensus 246 ~~~~~~~~~l~~~~~~L~pgG~l~i 270 (334)
T 2ip2_A 246 LDEAASLRLLGNCREAMAGDGRVVV 270 (334)
T ss_dssp CCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 8 333 999999999999999885
No 121
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.43 E-value=2e-13 Score=116.16 Aligned_cols=91 Identities=11% Similarity=0.154 Sum_probs=67.1
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCCCCCcE--------E---EccCCCCC---CCCCceeE
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVSNDPSV--------I---ACDMSNTP---LNSSSVDV 192 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~~~~~~--------~---~~d~~~lp---~~~~sfD~ 192 (223)
.+++.+....++.+|||||||||.++..++ .+|+|+|+++..+.+ . ..++..++ ++..+||+
T Consensus 75 ~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~ 154 (291)
T 3hp7_A 75 KALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSF 154 (291)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSE
T ss_pred HHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCE
Confidence 444544444456799999999999998775 489999999854432 1 12333333 34456999
Q ss_pred EEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
|++..++++ ...+|.++.|+|+|||.|++
T Consensus 155 v~~d~sf~s--l~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 155 ASIDVSFIS--LNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp EEECCSSSC--GGGTHHHHHHHSCTTCEEEE
T ss_pred EEEEeeHhh--HHHHHHHHHHHcCcCCEEEE
Confidence 999888765 48899999999999999975
No 122
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.42 E-value=8.9e-13 Score=115.27 Aligned_cols=82 Identities=13% Similarity=0.113 Sum_probs=69.3
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCC--CCCCCceeEEEEccc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNT--PLNSSSVDVAVFCLS 198 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~l--p~~~~sfD~Vi~~~~ 198 (223)
...+|||||||+|.++..++ .+++++|+.. .++.++.+|+... |++ ++||+|++..+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~v 257 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQF 257 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEech
Confidence 56899999999999998886 3799999832 2578899999875 566 78999999999
Q ss_pred ccCCCH---HHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~---~~~l~e~~rvLkpgG~lvi 223 (223)
+|+++. ..+|.++.++|+|||.|+|
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIGKDSKVYI 285 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 998833 4889999999999999975
No 123
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.42 E-value=6e-14 Score=110.29 Aligned_cols=94 Identities=12% Similarity=0.051 Sum_probs=73.4
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCC----CC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNT----PL 185 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~l----p~ 185 (223)
+.+++.+....++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+.+. ++
T Consensus 33 ~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 112 (187)
T 2fhp_A 33 ESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE 112 (187)
T ss_dssp HHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh
Confidence 4455555443367899999999999988765 4799999996 2467888888653 22
Q ss_pred CCCceeEEEEcccccCCCHHHHHHHH--HHccCCCCEEEc
Q 027441 186 NSSSVDVAVFCLSLMGINFPNYLQEA--QRVLKPRGEEQI 223 (223)
Q Consensus 186 ~~~sfD~Vi~~~~l~~~d~~~~l~e~--~rvLkpgG~lvi 223 (223)
.+.+||+|++...++..+...++..+ .++|+|||+|++
T Consensus 113 ~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~ 152 (187)
T 2fhp_A 113 EKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVC 152 (187)
T ss_dssp TTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEE
Confidence 36789999999887656778888888 899999999985
No 124
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.42 E-value=2.5e-13 Score=116.76 Aligned_cols=93 Identities=15% Similarity=0.239 Sum_probs=74.7
Q ss_pred HHHHHHHhc-cCCCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCCCCCCC
Q 027441 130 NIIVKWLKD-HSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 130 ~~i~~~l~~-~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~ 188 (223)
..+++.+.. ..+..+|||||||+|.++..++ .+++++|++. .++.+..+|+...+++..
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 232 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGND 232 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCC
Confidence 344555543 0367899999999999988876 3799999973 247889999988777655
Q ss_pred ceeEEEEcccccCCC---HHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGIN---FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d---~~~~l~e~~rvLkpgG~lvi 223 (223)
||+|++..++||++ ...++.++.++|+|||.|+|
T Consensus 233 -~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 269 (335)
T 2r3s_A 233 -YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIV 269 (335)
T ss_dssp -EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 99999999999983 35999999999999998875
No 125
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.42 E-value=9.7e-13 Score=113.35 Aligned_cols=80 Identities=16% Similarity=0.147 Sum_probs=68.1
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEcccc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l 199 (223)
+..+|||||||+|.++..++ .+++++|+ + .++.+..+|+. .|++. .||+|++..++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 245 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVL 245 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhh
Confidence 35799999999999998886 36899998 5 35788999997 45554 89999999999
Q ss_pred cCCCH---HHHHHHHHHccCCCCEEEc
Q 027441 200 MGINF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~---~~~l~e~~rvLkpgG~lvi 223 (223)
||++. ..+|.++.++|+|||.|+|
T Consensus 246 h~~~~~~~~~~l~~~~~~L~pgG~l~i 272 (332)
T 3i53_A 246 HDWDDLSAVAILRRCAEAAGSGGVVLV 272 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 99943 6999999999999999985
No 126
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.42 E-value=6.4e-13 Score=106.35 Aligned_cols=93 Identities=10% Similarity=0.093 Sum_probs=73.0
Q ss_pred chHHHHHHHHhccC--CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCCC
Q 027441 127 LPVNIIVKWLKDHS--PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTP 184 (223)
Q Consensus 127 ~~~~~i~~~l~~~~--~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~lp 184 (223)
.....+++.+.... ++.+|||+|||+|.++..++ .+|+|+|+++ .++.+..+|+..++
T Consensus 49 ~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 128 (207)
T 1jsx_A 49 MLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128 (207)
T ss_dssp HHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC
T ss_pred HHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC
Confidence 33455666655331 47899999999999888776 4799999996 24778899998876
Q ss_pred CCCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 185 LNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 185 ~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+.++||+|++... .++..++.++.++|+|||.|++
T Consensus 129 -~~~~~D~i~~~~~---~~~~~~l~~~~~~L~~gG~l~~ 163 (207)
T 1jsx_A 129 -SEPPFDGVISRAF---ASLNDMVSWCHHLPGEQGRFYA 163 (207)
T ss_dssp -CCSCEEEEECSCS---SSHHHHHHHHTTSEEEEEEEEE
T ss_pred -ccCCcCEEEEecc---CCHHHHHHHHHHhcCCCcEEEE
Confidence 4578999997542 3678999999999999999975
No 127
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.42 E-value=9.2e-13 Score=108.75 Aligned_cols=89 Identities=13% Similarity=0.012 Sum_probs=70.0
Q ss_pred HHHHHhccCCCCeEEEECCcchHHHHHhc---------CceEEEecCCC----------CCcEEEccCCCC---CCCC-C
Q 027441 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK---------NKVFSFDLVSN----------DPSVIACDMSNT---PLNS-S 188 (223)
Q Consensus 132 i~~~l~~~~~~~~ILDiGcG~G~~a~~la---------~~v~gvDis~~----------~~~~~~~d~~~l---p~~~-~ 188 (223)
+...+... +..+|||||||+|..+..|+ .+|+|+|+++. ++.++.+|+..+ ++.. .
T Consensus 73 l~~~l~~~-~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 73 YHDMLWEL-RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp HHHHHHHH-CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSS
T ss_pred HHHHHHhc-CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccC
Confidence 33344433 46799999999999877753 47999999983 477889999874 5433 4
Q ss_pred ceeEEEEcccccCCCHHHHHHHHHH-ccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINFPNYLQEAQR-VLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~~~~l~e~~r-vLkpgG~lvi 223 (223)
+||+|++... |.+.+.+|.++.| +|+|||+|++
T Consensus 152 ~fD~I~~d~~--~~~~~~~l~~~~r~~LkpGG~lv~ 185 (236)
T 2bm8_A 152 AHPLIFIDNA--HANTFNIMKWAVDHLLEEGDYFII 185 (236)
T ss_dssp CSSEEEEESS--CSSHHHHHHHHHHHTCCTTCEEEE
T ss_pred CCCEEEECCc--hHhHHHHHHHHHHhhCCCCCEEEE
Confidence 7999998765 5688999999998 9999999985
No 128
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.41 E-value=9.6e-14 Score=111.66 Aligned_cols=94 Identities=16% Similarity=0.073 Sum_probs=71.2
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC-----------------CCCcEEEccCCCCC--CC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS-----------------NDPSVIACDMSNTP--LN 186 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~-----------------~~~~~~~~d~~~lp--~~ 186 (223)
+.+.+.+....++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+..+. +.
T Consensus 42 ~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 121 (201)
T 2ift_A 42 ETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQ 121 (201)
T ss_dssp HHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCC
T ss_pred HHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhc
Confidence 3444544432256899999999999988754 4799999996 15678888886643 23
Q ss_pred CCc-eeEEEEcccccCCCHHHHHHHH--HHccCCCCEEEc
Q 027441 187 SSS-VDVAVFCLSLMGINFPNYLQEA--QRVLKPRGEEQI 223 (223)
Q Consensus 187 ~~s-fD~Vi~~~~l~~~d~~~~l~e~--~rvLkpgG~lvi 223 (223)
+++ ||+|++...++.-+...++..+ .++|+|||.|++
T Consensus 122 ~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i 161 (201)
T 2ift_A 122 NQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYV 161 (201)
T ss_dssp SSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEE
Confidence 678 9999998886544677889999 778999999985
No 129
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.41 E-value=8e-14 Score=113.87 Aligned_cols=83 Identities=11% Similarity=0.127 Sum_probs=68.3
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCC-C--CCCCceeEEEEcc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNT-P--LNSSSVDVAVFCL 197 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~l-p--~~~~sfD~Vi~~~ 197 (223)
.+.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+..+ + +++++||.|++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 56899999999999998887 3599999996 4678889998774 3 7789999999886
Q ss_pred cccCCC---------HHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGIN---------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d---------~~~~l~e~~rvLkpgG~lvi 223 (223)
...|.. .+.++.++.++|+|||.|+|
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i 148 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHM 148 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEE
Confidence 655431 13699999999999999975
No 130
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.41 E-value=4.9e-15 Score=121.74 Aligned_cols=92 Identities=16% Similarity=0.139 Sum_probs=74.4
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC----------------CCCcEEEccCCCCCCCCCce
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSV 190 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sf 190 (223)
..+...+....++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+..++ ++.+|
T Consensus 67 ~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~ 145 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKA 145 (241)
T ss_dssp HHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCC
T ss_pred HHHHHHhhhccCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCC
Confidence 4455555544478899999999999999887 5899999997 25788899998776 56899
Q ss_pred eEEEEcccccCC-CHHHHHHHHHHccCCCCEEE
Q 027441 191 DVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 191 D~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lv 222 (223)
|+|++...++|. +....+.++.++|+|||.++
T Consensus 146 D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 146 DVVFLSPPWGGPDYATAETFDIRTMMSPDGFEI 178 (241)
T ss_dssp SEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHH
T ss_pred CEEEECCCcCCcchhhhHHHHHHhhcCCcceeH
Confidence 999999999988 44557778889999998754
No 131
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.41 E-value=9.2e-13 Score=114.73 Aligned_cols=92 Identities=16% Similarity=0.231 Sum_probs=74.8
Q ss_pred hHHHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCCCCC
Q 027441 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLN 186 (223)
Q Consensus 128 ~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~lp~~ 186 (223)
..+.+++.+. ..+..+|||||||+|.++..++ .+++++|+ + .++.++.+|+...|++
T Consensus 178 ~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 178 AIQLLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC
T ss_pred hHHHHHHhcC-CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC
Confidence 3345555543 2367899999999999998886 37899999 6 2378899999888876
Q ss_pred CCceeEEEEcccccCC-C--HHHHHHHHHHccCCCCEEEc
Q 027441 187 SSSVDVAVFCLSLMGI-N--FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 187 ~~sfD~Vi~~~~l~~~-d--~~~~l~e~~rvLkpgG~lvi 223 (223)
+. |+|++..++||+ + ...+|.++.++|+|||.|+|
T Consensus 256 ~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i 293 (359)
T 1x19_A 256 EA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLI 293 (359)
T ss_dssp CC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 54 999999999988 4 57999999999999999975
No 132
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.40 E-value=5.1e-14 Score=110.25 Aligned_cols=95 Identities=8% Similarity=0.006 Sum_probs=73.0
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCC-CCCCC
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSN-TPLNS 187 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~-lp~~~ 187 (223)
.+.+++.+....++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+.. ++..+
T Consensus 19 ~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (177)
T 2esr_A 19 RGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLT 98 (177)
T ss_dssp HHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBC
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhc
Confidence 35666666533467899999999999988776 4799999996 246778888766 34445
Q ss_pred CceeEEEEcccccCCCHHHHHHHHH--HccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMGINFPNYLQEAQ--RVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~d~~~~l~e~~--rvLkpgG~lvi 223 (223)
+.||+|++...+++...+.++..+. ++|+|||+|++
T Consensus 99 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~ 136 (177)
T 2esr_A 99 GRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVC 136 (177)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEE
Confidence 6799999987765445667778887 99999999985
No 133
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.40 E-value=6.9e-13 Score=109.50 Aligned_cols=83 Identities=12% Similarity=0.056 Sum_probs=68.1
Q ss_pred CCCCeEEEECCcchHHHHHhc------CceEEEecCC-------------CCCcEEEccCCC---CCCCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS-------------NDPSVIACDMSN---TPLNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~-------------~~~~~~~~d~~~---lp~~~~sfD~Vi~~~ 197 (223)
.|+.+|||+|||+|.++..++ ++|+|+|+++ .++..+.+|... .++..+++|+|++..
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~ 155 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADV 155 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEec
Confidence 488999999999999999887 5799999997 467778777754 456778999998643
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. ++-+...++.++.++|||||.|+|
T Consensus 156 ~-~~~~~~~~l~~~~r~LKpGG~lvI 180 (233)
T 4df3_A 156 A-QPEQAAIVVRNARFFLRDGGYMLM 180 (233)
T ss_dssp C-CTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred c-CChhHHHHHHHHHHhccCCCEEEE
Confidence 2 333677999999999999999875
No 134
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.40 E-value=4.7e-13 Score=109.03 Aligned_cols=89 Identities=16% Similarity=0.099 Sum_probs=71.3
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC-------------CCCcEEEccCCCCCCCCCceeE
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDV 192 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~lp~~~~sfD~ 192 (223)
...+++.+.. .++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+......+++||+
T Consensus 59 ~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 137 (231)
T 1vbf_A 59 GIFMLDELDL-HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDR 137 (231)
T ss_dssp HHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEE
T ss_pred HHHHHHhcCC-CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccE
Confidence 3445555543 367899999999999998887 5899999997 1678889998763334678999
Q ss_pred EEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
|++..+++|+. .++.++|+|||.|++
T Consensus 138 v~~~~~~~~~~-----~~~~~~L~pgG~l~~ 163 (231)
T 1vbf_A 138 VVVWATAPTLL-----CKPYEQLKEGGIMIL 163 (231)
T ss_dssp EEESSBBSSCC-----HHHHHTEEEEEEEEE
T ss_pred EEECCcHHHHH-----HHHHHHcCCCcEEEE
Confidence 99999999985 368999999999985
No 135
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.39 E-value=1.3e-12 Score=106.39 Aligned_cols=84 Identities=18% Similarity=0.181 Sum_probs=68.0
Q ss_pred CCCCeEEEECCc-chHHHHHhc----CceEEEecCC--------------CCCcEEEccCCCC-CCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCG-DARLAKSVK----NKVFSFDLVS--------------NDPSVIACDMSNT-PLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG-~G~~a~~la----~~v~gvDis~--------------~~~~~~~~d~~~l-p~~~~sfD~Vi~~~~l 199 (223)
.++.+|||+||| +|.++..++ .+|+|+|+++ .++.++.+|+..+ ++++++||+|++...+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 367899999999 999888776 5799999997 2578899997543 4567899999998776
Q ss_pred cCCC--------------------HHHHHHHHHHccCCCCEEEc
Q 027441 200 MGIN--------------------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d--------------------~~~~l~e~~rvLkpgG~lvi 223 (223)
++.. ...++.++.++|+|||.|++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 6542 37899999999999999975
No 136
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.39 E-value=1.1e-12 Score=114.51 Aligned_cols=90 Identities=19% Similarity=0.269 Sum_probs=71.1
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCCCCCCC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~ 188 (223)
..+++.+. ..+..+|||||||+|.++..++ .+++++|+ + .++.++.+|+.. +++.
T Consensus 172 ~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~- 247 (374)
T 1qzz_A 172 EAPADAYD-WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV- 247 (374)
T ss_dssp HHHHHTSC-CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-
T ss_pred HHHHHhCC-CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-
Confidence 34444443 2367899999999999988886 37899998 5 268899999865 4443
Q ss_pred ceeEEEEcccccCCCH---HHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~---~~~l~e~~rvLkpgG~lvi 223 (223)
.||+|++..++||++. ..++.++.++|+|||.|+|
T Consensus 248 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (374)
T 1qzz_A 248 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLV 285 (374)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3999999999999843 3899999999999998875
No 137
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.39 E-value=6.2e-13 Score=108.85 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=65.1
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------CCCcEEEccCCC----CCCCCCceeEEEEccc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------NDPSVIACDMSN----TPLNSSSVDVAVFCLS 198 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------~~~~~~~~d~~~----lp~~~~sfD~Vi~~~~ 198 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+.. +++. .+||+|+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~---- 148 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIY---- 148 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEE----
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEE----
Confidence 67899999999999888776 4799999996 357788899988 7776 7899999
Q ss_pred ccCC-CH---HHHHHHHHHccCCCCEEEc
Q 027441 199 LMGI-NF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~-d~---~~~l~e~~rvLkpgG~lvi 223 (223)
+++ ++ ..++.++.++|+|||.|+|
T Consensus 149 -~~~~~~~~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 149 -EDVAQPNQAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp -ECCCSTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred -EecCChhHHHHHHHHHHHhCCCCcEEEE
Confidence 444 45 6789999999999999985
No 138
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.39 E-value=2.3e-13 Score=109.54 Aligned_cols=93 Identities=8% Similarity=0.053 Sum_probs=71.9
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCC-CCCCCCce
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSN-TPLNSSSV 190 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~-lp~~~~sf 190 (223)
.+++.+....++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+.. ++..+++|
T Consensus 44 ~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~f 123 (202)
T 2fpo_A 44 TLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPH 123 (202)
T ss_dssp HHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCE
T ss_pred HHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCC
Confidence 344444432256899999999999988754 4799999997 267888888866 56667899
Q ss_pred eEEEEcccccCCCHHHHHHHHHH--ccCCCCEEEc
Q 027441 191 DVAVFCLSLMGINFPNYLQEAQR--VLKPRGEEQI 223 (223)
Q Consensus 191 D~Vi~~~~l~~~d~~~~l~e~~r--vLkpgG~lvi 223 (223)
|+|++...++.-+...++..+.+ +|+|||+|++
T Consensus 124 D~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i 158 (202)
T 2fpo_A 124 NIVFVDPPFRRGLLEETINLLEDNGWLADEALIYV 158 (202)
T ss_dssp EEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEE
Confidence 99999888654477888888866 5999999975
No 139
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.39 E-value=1.1e-12 Score=113.92 Aligned_cols=79 Identities=23% Similarity=0.295 Sum_probs=67.6
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------CCCcEEEccCCCCCCCCCceeEEEEcccccCC-CHH
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFP 205 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d~~ 205 (223)
+..+|||||||+|.++..++ .+++++|+ + .++.++.+|+.. +++. ||+|++..++||+ +..
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d~~ 263 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFT-SIPN--ADAVLLKYILHNWTDKD 263 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTT-CCCC--CSEEEEESCGGGSCHHH
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccC-CCCC--ccEEEeehhhccCCHHH
Confidence 56899999999999998886 36999998 5 357888999966 5553 9999999999998 555
Q ss_pred --HHHHHHHHccCC---CCEEEc
Q 027441 206 --NYLQEAQRVLKP---RGEEQI 223 (223)
Q Consensus 206 --~~l~e~~rvLkp---gG~lvi 223 (223)
.+|.++.++|+| ||.|+|
T Consensus 264 ~~~~l~~~~~~L~p~~~gG~l~i 286 (352)
T 1fp2_A 264 CLRILKKCKEAVTNDGKRGKVTI 286 (352)
T ss_dssp HHHHHHHHHHHHSGGGCCCEEEE
T ss_pred HHHHHHHHHHhCCCCCCCcEEEE
Confidence 999999999999 999875
No 140
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.37 E-value=6.8e-13 Score=113.97 Aligned_cols=89 Identities=15% Similarity=0.199 Sum_probs=72.4
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc---Cc---eEEEecCC---------------CCCcEEEccCCCCCCCC
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NK---VFSFDLVS---------------NDPSVIACDMSNTPLNS 187 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~---v~gvDis~---------------~~~~~~~~d~~~lp~~~ 187 (223)
...+++.+... ++.+|||||||+|.++..++ .. |+|+|+++ .++.+..+|+...+..+
T Consensus 64 ~~~l~~~l~~~-~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~ 142 (317)
T 1dl5_A 64 MALFMEWVGLD-KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEF 142 (317)
T ss_dssp HHHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHhcCCC-CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccC
Confidence 34555555443 77899999999999988886 34 99999996 34788899998765556
Q ss_pred CceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
++||+|++..+++|+. .++.++|+|||.|++
T Consensus 143 ~~fD~Iv~~~~~~~~~-----~~~~~~LkpgG~lvi 173 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP-----ETWFTQLKEGGRVIV 173 (317)
T ss_dssp CCEEEEEECSBBSCCC-----HHHHHHEEEEEEEEE
T ss_pred CCeEEEEEcCCHHHHH-----HHHHHhcCCCcEEEE
Confidence 8899999999999986 578899999999985
No 141
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.37 E-value=4.8e-13 Score=111.46 Aligned_cols=92 Identities=12% Similarity=0.235 Sum_probs=71.5
Q ss_pred HHHHHhccC-CCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCC--CCCC
Q 027441 132 IVKWLKDHS-PSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTP--LNSS 188 (223)
Q Consensus 132 i~~~l~~~~-~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp--~~~~ 188 (223)
++..+.... ++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+.+++ ++++
T Consensus 39 ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~ 118 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKE 118 (259)
T ss_dssp HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTT
T ss_pred HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccC
Confidence 444444444 67899999999999999887 3799999996 24788999998765 5578
Q ss_pred ceeEEEEcccccCC---------------------CHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGI---------------------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~---------------------d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++.-.+.+. +...++..+.++|+|||.|++
T Consensus 119 ~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 119 RADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp CEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 99999996544321 235799999999999999985
No 142
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.37 E-value=4.7e-13 Score=106.45 Aligned_cols=84 Identities=20% Similarity=0.306 Sum_probs=68.3
Q ss_pred CCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCCC-CCCCceeEEEEc
Q 027441 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTP-LNSSSVDVAVFC 196 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~lp-~~~~sfD~Vi~~ 196 (223)
.++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+..++ +.+++||+|++.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 367899999999999888776 3799999996 25778899988775 567899999988
Q ss_pred ccccC-----C-----CHHHHHHHHHHccCCCCEEEc
Q 027441 197 LSLMG-----I-----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~l~~-----~-----d~~~~l~e~~rvLkpgG~lvi 223 (223)
..+.. + +...++.++.++|+|||.|++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 76511 1 335899999999999999975
No 143
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.37 E-value=1.9e-12 Score=112.15 Aligned_cols=93 Identities=16% Similarity=0.173 Sum_probs=73.1
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCCC-CCCCc
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTP-LNSSS 189 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~lp-~~~~s 189 (223)
.++..+.......+|||||||+|.++..++ .+++++|+.. .++.++.+|+...+ +.+..
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 248 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGA 248 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCC
Confidence 344444333227899999999999998886 3789999943 24788999998876 13456
Q ss_pred eeEEEEcccccCCCH---HHHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMGINF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~~d~---~~~l~e~~rvLkpgG~lvi 223 (223)
||+|++..++||++. ..+|.++.++|+|||.|+|
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 999999999999843 6999999999999999975
No 144
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.36 E-value=6.1e-13 Score=109.83 Aligned_cols=83 Identities=17% Similarity=0.274 Sum_probs=66.7
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------------CCCcEEEccCCC-CC--CCCCcee
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------------NDPSVIACDMSN-TP--LNSSSVD 191 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------------~~~~~~~~d~~~-lp--~~~~sfD 191 (223)
+..+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+.. +| +++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 56789999999999999887 3699999984 357789999986 66 7889999
Q ss_pred EEEEcccccCC---------CHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGI---------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~---------d~~~~l~e~~rvLkpgG~lvi 223 (223)
.|++.+.-.|. ..+.++.++.++|+|||.|+|
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~ 166 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYT 166 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEE
Confidence 99876544332 125799999999999999975
No 145
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.36 E-value=5e-13 Score=109.63 Aligned_cols=83 Identities=14% Similarity=0.160 Sum_probs=63.4
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------------CCCcEEEccCCCCCCC-CCceeEEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSNTPLN-SSSVDVAVF 195 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------------~~~~~~~~d~~~lp~~-~~sfD~Vi~ 195 (223)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.+..+|+..+|.. .+.+|.|++
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 67899999999999998887 3699999993 2466888899888632 255666665
Q ss_pred ccccc----CC--CHHHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLM----GI--NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~----~~--d~~~~l~e~~rvLkpgG~lvi 223 (223)
.+.+. |. +++.+|.++.|+|||||.|+|
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 54322 11 456899999999999999975
No 146
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.36 E-value=9.4e-13 Score=105.42 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=67.5
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEcccccC
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~ 201 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+|+...+ +++||+|++...+++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--DGKFDLIVANILAEI 137 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--CSCEEEEEEESCHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--CCCceEEEECCcHHH
Confidence 67899999999999988876 3799999997 23788899987643 589999999988776
Q ss_pred CCHHHHHHHHHHccCCCCEEEc
Q 027441 202 INFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...++.++.++|+|||.|++
T Consensus 138 --~~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 138 --LLDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp --HHHHGGGSGGGEEEEEEEEE
T ss_pred --HHHHHHHHHHhcCCCCEEEE
Confidence 47889999999999999985
No 147
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.36 E-value=4.9e-13 Score=111.36 Aligned_cols=80 Identities=13% Similarity=0.030 Sum_probs=67.3
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCCCCC---CCceeEEEEcc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLN---SSSVDVAVFCL 197 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~lp~~---~~sfD~Vi~~~ 197 (223)
++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+++++.. +++||+|++..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 56899999999999888776 4799999997 3688899999877653 47999999865
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ .++..++..+.++|+|||.|++
T Consensus 160 ~---~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 160 V---APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp S---CCHHHHHHHHGGGEEEEEEEEE
T ss_pred c---CCHHHHHHHHHHHcCCCeEEEE
Confidence 4 3778999999999999999874
No 148
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.35 E-value=5.9e-13 Score=104.42 Aligned_cols=90 Identities=21% Similarity=0.337 Sum_probs=70.8
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC----------------CCCcEEEccCCCCCCCC-Cc
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNS-SS 189 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------------~~~~~~~~d~~~lp~~~-~s 189 (223)
..++..+.. .++.+|||+|||+|.++..++ .+|+++|+++ .++.+..+|+.. ++++ ..
T Consensus 23 ~~~~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 100 (192)
T 1l3i_A 23 CLIMCLAEP-GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPD 100 (192)
T ss_dssp HHHHHHHCC-CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCC
T ss_pred HHHHHhcCC-CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCC
Confidence 344555543 377899999999999998887 5799999986 256777888765 3333 58
Q ss_pred eeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
||+|++..+++ ++..++.++.++|+|||.|++
T Consensus 101 ~D~v~~~~~~~--~~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 101 IDIAVVGGSGG--ELQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp EEEEEESCCTT--CHHHHHHHHHHTEEEEEEEEE
T ss_pred CCEEEECCchH--HHHHHHHHHHHhcCCCcEEEE
Confidence 99999988765 468999999999999999875
No 149
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.35 E-value=4.9e-12 Score=109.92 Aligned_cols=90 Identities=17% Similarity=0.248 Sum_probs=70.9
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCCCCCCC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~ 188 (223)
..+++.+.. .+..+|||||||+|.++..++ ..++++|+ + .++.++.+|+.. +++.
T Consensus 173 ~~l~~~~~~-~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~- 248 (360)
T 1tw3_A 173 DAPAAAYDW-TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR- 248 (360)
T ss_dssp HHHHHHSCC-TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-
T ss_pred HHHHHhCCC-ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-
Confidence 445555432 367899999999999988886 36888997 4 267889999865 3443
Q ss_pred ceeEEEEcccccCCCH---HHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~---~~~l~e~~rvLkpgG~lvi 223 (223)
.||+|++..++||++. ..++.++.++|+|||.|+|
T Consensus 249 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i 286 (360)
T 1tw3_A 249 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILI 286 (360)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 4999999999999843 3899999999999999875
No 150
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.35 E-value=5.6e-13 Score=109.99 Aligned_cols=92 Identities=13% Similarity=0.192 Sum_probs=59.4
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCCCCCcE--------EEc---cCCCC---CCCCCcee
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVSNDPSV--------IAC---DMSNT---PLNSSSVD 191 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~~~~~~--------~~~---d~~~l---p~~~~sfD 191 (223)
..+++.+.....+.+|||||||+|.++..++ .+|+|+|+|+..+.. ... ++..+ .+....||
T Consensus 26 ~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 105 (232)
T 3opn_A 26 EKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPS 105 (232)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCS
T ss_pred HHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCC
Confidence 3445555444456799999999999998876 389999999844332 111 11111 11111245
Q ss_pred EEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.+.+..++.+ ...+|.++.|+|+|||.|++
T Consensus 106 ~~~~D~v~~~--l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 106 FTSIDVSFIS--LDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp EEEECCSSSC--GGGTHHHHHHHSCTTCEEEE
T ss_pred EEEEEEEhhh--HHHHHHHHHHhccCCCEEEE
Confidence 5554444443 37899999999999999975
No 151
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=1.5e-12 Score=104.84 Aligned_cols=88 Identities=18% Similarity=0.151 Sum_probs=68.7
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CCCcEEEccCCCCCCCCC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~ 188 (223)
..+++.+.. .++.+|||||||+|.++..++ .+|+++|+++ .++.+..+|+......++
T Consensus 67 ~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 145 (215)
T 2yxe_A 67 GMMCELLDL-KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA 145 (215)
T ss_dssp HHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred HHHHHhhCC-CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence 345555543 367899999999999888775 4799999996 356788888744322367
Q ss_pred ceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++..+++|+. .++.++|+|||.|++
T Consensus 146 ~fD~v~~~~~~~~~~-----~~~~~~L~pgG~lv~ 175 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIP-----EPLIRQLKDGGKLLM 175 (215)
T ss_dssp CEEEEEESSBBSSCC-----HHHHHTEEEEEEEEE
T ss_pred CeeEEEECCchHHHH-----HHHHHHcCCCcEEEE
Confidence 899999999999886 488999999999985
No 152
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.35 E-value=1.6e-13 Score=109.70 Aligned_cols=92 Identities=17% Similarity=0.116 Sum_probs=64.9
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCCC--------------CCcEEEccCCCCCCCC---
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN--------------DPSVIACDMSNTPLNS--- 187 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~~--------------~~~~~~~d~~~lp~~~--- 187 (223)
+.+++.+....++.+|||+|||+|.++..++ .+|+|+|+++. ++.++.+|+.. ++++
T Consensus 19 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 97 (215)
T 4dzr_A 19 EEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAE 97 (215)
T ss_dssp HHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHHHHH
T ss_pred HHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhh
Confidence 3455555442477899999999999988877 37999999983 34555666655 4554
Q ss_pred --CceeEEEEcccccCC-C--------------------------HHHHHHHHHHccCCCCE-EE
Q 027441 188 --SSVDVAVFCLSLMGI-N--------------------------FPNYLQEAQRVLKPRGE-EQ 222 (223)
Q Consensus 188 --~sfD~Vi~~~~l~~~-d--------------------------~~~~l~e~~rvLkpgG~-lv 222 (223)
++||+|++...+++. + ...++.++.++|+|||+ ++
T Consensus 98 ~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 162 (215)
T 4dzr_A 98 RGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVF 162 (215)
T ss_dssp TTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEE
T ss_pred ccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 899999997555432 1 16788999999999999 54
No 153
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.34 E-value=1.2e-12 Score=112.12 Aligned_cols=82 Identities=15% Similarity=0.106 Sum_probs=63.3
Q ss_pred CCCCeEEEECCcchHHHHHhcCc--eEEEec----CC-------------CCCcEEEc-cCCCCCCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVKNK--VFSFDL----VS-------------NDPSVIAC-DMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la~~--v~gvDi----s~-------------~~~~~~~~-d~~~lp~~~~sfD~Vi~~~~l 199 (223)
.++.+|||||||+|.++..++.. |+|+|+ ++ .++.++.+ |+..+| ..+||+|+|..++
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~~ 158 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIGE 158 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEECCcc
Confidence 46789999999999999999854 999999 33 12455666 776665 5689999998876
Q ss_pred c---CC-CHH---HHHHHHHHccCCCCEEEc
Q 027441 200 M---GI-NFP---NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~---~~-d~~---~~l~e~~rvLkpgG~lvi 223 (223)
+ +. +.. .+|.++.++|+|||.|++
T Consensus 159 ~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 159 SSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred ccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4 21 333 578999999999999875
No 154
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.34 E-value=9.1e-13 Score=107.11 Aligned_cols=82 Identities=7% Similarity=0.100 Sum_probs=65.7
Q ss_pred CCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCC-CCC-C----CCceeE
Q 027441 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSN-TPL-N----SSSVDV 192 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~-lp~-~----~~sfD~ 192 (223)
++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+.. ++. . .++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 67899999999999998886 3799999997 247788888744 332 1 278999
Q ss_pred EEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
|++....++. +...++..+ ++|+|||+|++
T Consensus 138 V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~ 168 (221)
T 3u81_A 138 VFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLA 168 (221)
T ss_dssp EEECSCGGGHHHHHHHHHHT-TCCCTTCEEEE
T ss_pred EEEcCCcccchHHHHHHHhc-cccCCCeEEEE
Confidence 9998877766 555777777 99999999985
No 155
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.33 E-value=2.3e-12 Score=105.68 Aligned_cols=81 Identities=12% Similarity=0.094 Sum_probs=67.2
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCC-C-CCCCceeEEEEcc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNT-P-LNSSSVDVAVFCL 197 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~l-p-~~~~sfD~Vi~~~ 197 (223)
++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... + ..+++||+|++..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 67899999999999998887 4799999996 2678999998664 4 3368999999764
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. .-+...++.++.++|+|||+|++
T Consensus 151 ~--~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 151 A--KAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp T--SSSHHHHHHHHGGGEEEEEEEEE
T ss_pred c--HHHHHHHHHHHHHhcCCCeEEEE
Confidence 4 22678899999999999999985
No 156
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=1.6e-12 Score=101.30 Aligned_cols=87 Identities=14% Similarity=0.227 Sum_probs=71.8
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcEEEccCCCCCCCCCcee
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVD 191 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD 191 (223)
..++..+... ++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+.. ++++++||
T Consensus 25 ~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D 102 (183)
T 2yxd_A 25 AVSIGKLNLN-KDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFN 102 (183)
T ss_dssp HHHHHHHCCC-TTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCS
T ss_pred HHHHHHcCCC-CCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCc
Confidence 4555555433 67899999999999999887 5899999997 357788888877 66678999
Q ss_pred EEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|++..+ .++..++.++.++ |||.|++
T Consensus 103 ~i~~~~~---~~~~~~l~~~~~~--~gG~l~~ 129 (183)
T 2yxd_A 103 KAFIGGT---KNIEKIIEILDKK--KINHIVA 129 (183)
T ss_dssp EEEECSC---SCHHHHHHHHHHT--TCCEEEE
T ss_pred EEEECCc---ccHHHHHHHHhhC--CCCEEEE
Confidence 9999988 5778999999999 9999975
No 157
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.33 E-value=1.5e-12 Score=114.73 Aligned_cols=91 Identities=18% Similarity=0.222 Sum_probs=71.5
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC------------------CCCcEEEccCCCCCCCC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS------------------NDPSVIACDMSNTPLNS 187 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~------------------~~~~~~~~d~~~lp~~~ 187 (223)
.+++.+... ++.+|||+|||+|.++..++ .+|+|+|+++ .++.+..+|+.. ++++
T Consensus 213 ~ll~~l~~~-~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~ 290 (375)
T 4dcm_A 213 FFMQHLPEN-LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEP 290 (375)
T ss_dssp HHHHTCCCS-CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCT
T ss_pred HHHHhCccc-CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCC
Confidence 456665544 55899999999999998886 4799999997 135668899877 5667
Q ss_pred CceeEEEEcccccCC------CHHHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMGI------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~------d~~~~l~e~~rvLkpgG~lvi 223 (223)
++||+|++...+|+. ....++.++.++|+|||.|+|
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 899999999998864 123789999999999999986
No 158
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.32 E-value=1.7e-12 Score=106.26 Aligned_cols=81 Identities=15% Similarity=0.148 Sum_probs=65.9
Q ss_pred CCCeEEEECCcchHHHHHhc------CceEEEecCC-------------CCCcEEEccCCC---CCCCCCceeEEEEccc
Q 027441 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS-------------NDPSVIACDMSN---TPLNSSSVDVAVFCLS 198 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------~~v~gvDis~-------------~~~~~~~~d~~~---lp~~~~sfD~Vi~~~~ 198 (223)
++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+.. +++.+++||+|++...
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC
Confidence 67899999999999888775 4799999994 467888999987 4556789999998655
Q ss_pred ccCCCH-HHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINF-PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~-~~~l~e~~rvLkpgG~lvi 223 (223)
..+. ..++.++.++|+|||.|+|
T Consensus 157 --~~~~~~~~~~~~~~~LkpgG~l~i 180 (233)
T 2ipx_A 157 --QPDQTRIVALNAHTFLRNGGHFVI 180 (233)
T ss_dssp --CTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred --CccHHHHHHHHHHHHcCCCeEEEE
Confidence 2233 4568889999999999985
No 159
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.31 E-value=4.3e-12 Score=102.13 Aligned_cols=90 Identities=12% Similarity=0.028 Sum_probs=68.7
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCC-CCCC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-PLNS 187 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~l-p~~~ 187 (223)
.++..+....+..+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... +..+
T Consensus 46 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 125 (210)
T 3c3p_A 46 RLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQR 125 (210)
T ss_dssp HHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCC
T ss_pred HHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCC
Confidence 344444333366899999999999988886 3799999997 2467888888553 4445
Q ss_pred CceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ ||+|++... ..+...++.++.++|+|||+|++
T Consensus 126 ~-fD~v~~~~~--~~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 126 D-IDILFMDCD--VFNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp S-EEEEEEETT--TSCHHHHHHHHGGGEEEEEEEEE
T ss_pred C-CCEEEEcCC--hhhhHHHHHHHHHhcCCCeEEEE
Confidence 6 999998743 23788999999999999999975
No 160
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.31 E-value=5.5e-12 Score=109.82 Aligned_cols=80 Identities=19% Similarity=0.256 Sum_probs=67.9
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC--------CCCcEEEccCCCCCCCCCceeEEEEcccccCC-CHH-
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFP- 205 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d~~- 205 (223)
+..+|||||||+|.++..++ .+++++|++. .++.++.+|+.. |++ .||+|++..++||+ |..
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~~ 269 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQS 269 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCC-CCC--CceEEEEcccccCCCHHHH
Confidence 56899999999999998886 3688999843 357888999977 665 49999999999988 544
Q ss_pred -HHHHHHHHccCC---CCEEEc
Q 027441 206 -NYLQEAQRVLKP---RGEEQI 223 (223)
Q Consensus 206 -~~l~e~~rvLkp---gG~lvi 223 (223)
.+|.++.++|+| ||.|+|
T Consensus 270 ~~~l~~~~~~L~p~~~gG~l~i 291 (358)
T 1zg3_A 270 LKILKNSKEAISHKGKDGKVII 291 (358)
T ss_dssp HHHHHHHHHHTGGGGGGCEEEE
T ss_pred HHHHHHHHHhCCCCCCCcEEEE
Confidence 999999999999 998875
No 161
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.31 E-value=1.3e-12 Score=113.48 Aligned_cols=92 Identities=18% Similarity=0.259 Sum_probs=73.4
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC--------------CCCcEEEccCCCCCCCCCc
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSS 189 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~s 189 (223)
...+++.+... +..+|||||||+|.++..++ .+|+++|+++ ....++.+|+...+ +++
T Consensus 185 ~~~ll~~l~~~-~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~ 261 (343)
T 2pjd_A 185 SQLLLSTLTPH-TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGR 261 (343)
T ss_dssp HHHHHHHSCTT-CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSC
T ss_pred HHHHHHhcCcC-CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCC
Confidence 45566666433 46799999999999998886 3799999997 23456778876644 678
Q ss_pred eeEEEEcccccCC------CHHHHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMGI------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~~------d~~~~l~e~~rvLkpgG~lvi 223 (223)
||+|++...+|+. +...++.++.++|+|||.|+|
T Consensus 262 fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 262 FDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp EEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred eeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 9999999999862 456999999999999999985
No 162
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.31 E-value=3.8e-12 Score=104.04 Aligned_cols=90 Identities=12% Similarity=0.089 Sum_probs=70.4
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCC-CCC--
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNT-PLN-- 186 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~l-p~~-- 186 (223)
.+...+... ++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... +..
T Consensus 45 ~l~~~~~~~-~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 123 (233)
T 2gpy_A 45 SLLHLLKMA-APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLEL 123 (233)
T ss_dssp HHHHHHHHH-CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTT
T ss_pred HHHHHHhcc-CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhccc
Confidence 333344333 67899999999999888776 4799999996 2477888888663 432
Q ss_pred CCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 187 SSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 187 ~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+++||+|++....+ ++..++..+.++|+|||.|++
T Consensus 124 ~~~fD~I~~~~~~~--~~~~~l~~~~~~L~pgG~lv~ 158 (233)
T 2gpy_A 124 YPLFDVLFIDAAKG--QYRRFFDMYSPMVRPGGLILS 158 (233)
T ss_dssp SCCEEEEEEEGGGS--CHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCccEEEECCCHH--HHHHHHHHHHHHcCCCeEEEE
Confidence 57899999877753 778999999999999999985
No 163
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.30 E-value=5e-13 Score=103.34 Aligned_cols=93 Identities=11% Similarity=0.106 Sum_probs=69.9
Q ss_pred HHHHHHHhcc-CCCCeEEEECCcchHHHHHhc---CceEEEecCC--------------CCCcEEEccCCCC-C-C--CC
Q 027441 130 NIIVKWLKDH-SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNT-P-L--NS 187 (223)
Q Consensus 130 ~~i~~~l~~~-~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------------~~~~~~~~d~~~l-p-~--~~ 187 (223)
+.++..+... +++.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+.+. + + ..
T Consensus 29 ~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (171)
T 1ws6_A 29 KALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQG 108 (171)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTT
T ss_pred HHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccC
Confidence 3445555432 256899999999999998887 4599999997 1678888887652 2 1 13
Q ss_pred CceeEEEEcccccCCCHHHHHHHHH--HccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMGINFPNYLQEAQ--RVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~d~~~~l~e~~--rvLkpgG~lvi 223 (223)
.+||+|++...++ .+.+.++..+. ++|+|||.|++
T Consensus 109 ~~~D~i~~~~~~~-~~~~~~~~~~~~~~~L~~gG~~~~ 145 (171)
T 1ws6_A 109 ERFTVAFMAPPYA-MDLAALFGELLASGLVEAGGLYVL 145 (171)
T ss_dssp CCEEEEEECCCTT-SCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred CceEEEEECCCCc-hhHHHHHHHHHhhcccCCCcEEEE
Confidence 4799999998876 55567777777 99999999985
No 164
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.30 E-value=6.4e-13 Score=106.22 Aligned_cols=82 Identities=15% Similarity=0.112 Sum_probs=65.8
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCCC------------CC--cEEEccCCCCCCCCCceeEEEEccccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN------------DP--SVIACDMSNTPLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~~------------~~--~~~~~d~~~lp~~~~sfD~Vi~~~~l~ 200 (223)
++..+|||||||+|.++..++ .+|+|+|+++. .+ .+..+|.... .+.++||+|++..++|
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHH
Confidence 367899999999999999994 58999999971 11 2444555443 3568899999999999
Q ss_pred CC-CHHHHHHHHHHccCCCCEEE
Q 027441 201 GI-NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 201 ~~-d~~~~l~e~~rvLkpgG~lv 222 (223)
++ +....+..+.+.|+|||+||
T Consensus 127 lL~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 127 VLKQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp HHHHTTCCHHHHHHTCEEEEEEE
T ss_pred hhhhhHHHHHHHHHHhCCCCEEE
Confidence 99 55577779999999999987
No 165
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.29 E-value=1.1e-12 Score=108.75 Aligned_cols=81 Identities=16% Similarity=0.190 Sum_probs=65.1
Q ss_pred CCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCC-CCC-----CCceeE
Q 027441 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-PLN-----SSSVDV 192 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~l-p~~-----~~sfD~ 192 (223)
+..+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... +.. +++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 67899999999999888876 3799999997 2567788887553 211 478999
Q ss_pred EEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
|++... .-+...++.++.++|+|||+|++
T Consensus 140 V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 140 IFIDAD--KTNYLNYYELALKLVTPKGLIAI 168 (242)
T ss_dssp EEEESC--GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEcCC--hHHhHHHHHHHHHhcCCCeEEEE
Confidence 998765 22677899999999999999985
No 166
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.29 E-value=6.8e-13 Score=103.86 Aligned_cols=73 Identities=19% Similarity=0.174 Sum_probs=62.4
Q ss_pred CCCCeEEEECCcchHHHHHhcCceEEEecCC-----------CCCcEEEccCCCCCC---CCCceeEEEEcccccCC--C
Q 027441 140 SPSLVIADFGCGDARLAKSVKNKVFSFDLVS-----------NDPSVIACDMSNTPL---NSSSVDVAVFCLSLMGI--N 203 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la~~v~gvDis~-----------~~~~~~~~d~~~lp~---~~~sfD~Vi~~~~l~~~--d 203 (223)
.++.+|||||||... +|+|+ .++.+..+|+..+++ ++++||+|++..++||+ +
T Consensus 11 ~~g~~vL~~~~g~v~-----------vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~ 79 (176)
T 2ld4_A 11 SAGQFVAVVWDKSSP-----------VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLH 79 (176)
T ss_dssp CTTSEEEEEECTTSC-----------HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCC
T ss_pred CCCCEEEEecCCcee-----------eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccC
Confidence 478999999999732 33332 358899999999887 78999999999999998 8
Q ss_pred HHHHHHHHHHccCCCCEEEc
Q 027441 204 FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lvi 223 (223)
+..++.+++|+|||||.|++
T Consensus 80 ~~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 80 SAEILAEIARILRPGGCLFL 99 (176)
T ss_dssp CHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEE
Confidence 89999999999999999985
No 167
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.29 E-value=3e-12 Score=106.21 Aligned_cols=91 Identities=12% Similarity=0.054 Sum_probs=69.5
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCC-CCCC-
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSN-TPLN- 186 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~-lp~~- 186 (223)
.++..+....++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+.. ++..
T Consensus 53 ~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~ 132 (248)
T 3tfw_A 53 QFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG 132 (248)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC
T ss_pred HHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC
Confidence 444444333367899999999999988886 3799999997 257888898855 3322
Q ss_pred -CCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 187 -SSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 187 -~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.++||+|++... .-+.+.++.++.++|+|||+|++
T Consensus 133 ~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~ 168 (248)
T 3tfw_A 133 ECPAFDLIFIDAD--KPNNPHYLRWALRYSRPGTLIIG 168 (248)
T ss_dssp SCCCCSEEEECSC--GGGHHHHHHHHHHTCCTTCEEEE
T ss_pred CCCCeEEEEECCc--hHHHHHHHHHHHHhcCCCeEEEE
Confidence 348999998653 22667899999999999999985
No 168
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.28 E-value=1.1e-11 Score=102.38 Aligned_cols=82 Identities=13% Similarity=0.154 Sum_probs=63.8
Q ss_pred CCCCeEEEECCcchHHHHHhc------CceEEEecCC-------------CCCcEEEccCCCCC---CCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS-------------NDPSVIACDMSNTP---LNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~-------------~~~~~~~~d~~~lp---~~~~sfD~Vi~~~ 197 (223)
.++.+|||+|||+|.++..++ ++|+|+|+++ .++.++.+|+...+ ...++||+|++..
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecC
Confidence 478999999999999988776 3899999997 46788899987643 1246899999886
Q ss_pred cccCCCHHHH-HHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNY-LQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~-l~e~~rvLkpgG~lvi 223 (223)
+. .+...+ +..+.++|||||.|++
T Consensus 155 a~--~~~~~il~~~~~~~LkpGG~lvi 179 (232)
T 3id6_C 155 AQ--PDQTDIAIYNAKFFLKVNGDMLL 179 (232)
T ss_dssp CC--TTHHHHHHHHHHHHEEEEEEEEE
T ss_pred CC--hhHHHHHHHHHHHhCCCCeEEEE
Confidence 54 344444 4556669999999985
No 169
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.28 E-value=5.6e-12 Score=103.33 Aligned_cols=88 Identities=20% Similarity=0.270 Sum_probs=68.8
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCCCCCC-
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSS- 188 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~- 188 (223)
...+++.+.. .++.+|||||||+|.++..++ .+|+++|+++ .++.+..+|+ ..++++.
T Consensus 80 ~~~~~~~l~~-~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~ 157 (235)
T 1jg1_A 80 VAIMLEIANL-KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKA 157 (235)
T ss_dssp HHHHHHHHTC-CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGC
T ss_pred HHHHHHhcCC-CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCC
Confidence 3455555543 367899999999999888876 5899999996 2567888887 4445444
Q ss_pred ceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.||+|++..+++++. .++.++|+|||.|+|
T Consensus 158 ~fD~Ii~~~~~~~~~-----~~~~~~L~pgG~lvi 187 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIP-----EPLIEQLKIGGKLII 187 (235)
T ss_dssp CEEEEEECSBBSSCC-----HHHHHTEEEEEEEEE
T ss_pred CccEEEECCcHHHHH-----HHHHHhcCCCcEEEE
Confidence 499999999998875 378999999999985
No 170
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.28 E-value=7.8e-12 Score=102.20 Aligned_cols=91 Identities=10% Similarity=0.049 Sum_probs=68.3
Q ss_pred HHHHHHhccCCCC---eEEEECCcchHHHHHhc------CceEEEecCC---------------C--CCcEEEccCCCC-
Q 027441 131 IIVKWLKDHSPSL---VIADFGCGDARLAKSVK------NKVFSFDLVS---------------N--DPSVIACDMSNT- 183 (223)
Q Consensus 131 ~i~~~l~~~~~~~---~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~--~~~~~~~d~~~l- 183 (223)
.++..+....+.. +|||||||+|..+..++ .+|+++|+++ . ++.++.+|+.++
T Consensus 43 ~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l 122 (221)
T 3dr5_A 43 QLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM 122 (221)
T ss_dssp HHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG
T ss_pred HHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH
Confidence 3444444332334 99999999999888776 4799999997 1 467788887553
Q ss_pred -CCCCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 184 -PLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 184 -p~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.+.+++||+|++.... .+...++.++.++|+|||+|++
T Consensus 123 ~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 123 SRLANDSYQLVFGQVSP--MDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp GGSCTTCEEEEEECCCT--TTHHHHHHHHHHHEEEEEEEEE
T ss_pred HHhcCCCcCeEEEcCcH--HHHHHHHHHHHHHcCCCcEEEE
Confidence 2446899999986542 2677899999999999999985
No 171
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.28 E-value=2.8e-12 Score=116.35 Aligned_cols=82 Identities=20% Similarity=0.295 Sum_probs=69.0
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEcccccC
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~ 201 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+.+++++ +.||+|++..+++|
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~ 236 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYM 236 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHh
Confidence 67899999999999988876 4799999986 3578899999988765 58999999888776
Q ss_pred C---CHHHHHHHHHHccCCCCEEEc
Q 027441 202 I---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ +...++.++.++|+|||.|++
T Consensus 237 ~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 237 LFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred cCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 6 335777788999999999974
No 172
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.28 E-value=6.5e-12 Score=104.97 Aligned_cols=85 Identities=15% Similarity=0.264 Sum_probs=67.6
Q ss_pred cCCCCeEEEECCcchHHHHHhc-----CceEEEecCC-----------C--------CCcEEEccCCCC-------CCCC
Q 027441 139 HSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-----------N--------DPSVIACDMSNT-------PLNS 187 (223)
Q Consensus 139 ~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-----------~--------~~~~~~~d~~~l-------p~~~ 187 (223)
..++.+|||+|||+|.++..++ .+|+|+|+++ . ++.++.+|+.++ ++++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 3367899999999999988876 3799999986 1 267889999887 3667
Q ss_pred CceeEEEEccccc----------------CC---CHHHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLM----------------GI---NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~----------------~~---d~~~~l~e~~rvLkpgG~lvi 223 (223)
++||+|++.-.+. |. +...++..+.++|+|||.|++
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 8999999973322 11 477999999999999999975
No 173
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.28 E-value=4.7e-12 Score=113.27 Aligned_cols=93 Identities=10% Similarity=0.029 Sum_probs=68.5
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC------------------------CCCcEEEccC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS------------------------NDPSVIACDM 180 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~------------------------~~~~~~~~d~ 180 (223)
..+++.+.. .++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|.
T Consensus 232 ~~ml~~l~l-~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 232 SDVYQQCQL-KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHHHHHTTC-CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HHHHHhcCC-CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 344444433 367899999999999988877 3699999986 1345666654
Q ss_pred CCC--CC--CCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 181 SNT--PL--NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 181 ~~l--p~--~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
... ++ ..++||+|++..++.+-+++.+|.++.++|+|||.|++
T Consensus 311 ~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi 357 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIIS 357 (433)
T ss_dssp STTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEE
T ss_pred cccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEE
Confidence 322 22 24789999987776433778899999999999999985
No 174
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.27 E-value=5.3e-12 Score=102.56 Aligned_cols=88 Identities=18% Similarity=0.177 Sum_probs=70.3
Q ss_pred HHHHHHh-ccCCCCeEEEECCcchHHHHHhc---C-------ceEEEecCC--------------------CCCcEEEcc
Q 027441 131 IIVKWLK-DHSPSLVIADFGCGDARLAKSVK---N-------KVFSFDLVS--------------------NDPSVIACD 179 (223)
Q Consensus 131 ~i~~~l~-~~~~~~~ILDiGcG~G~~a~~la---~-------~v~gvDis~--------------------~~~~~~~~d 179 (223)
.+++.+. ...++.+|||||||+|.++..++ . +|+++|+++ .++.++.+|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 4455553 23467899999999999888776 3 899999986 146788888
Q ss_pred CCCCC----CCCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 180 MSNTP----LNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 180 ~~~lp----~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+...+ +..++||+|++..+++++ +.++.++|+|||.|++
T Consensus 149 ~~~~~~~~~~~~~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~lv~ 191 (227)
T 2pbf_A 149 IYQVNEEEKKELGLFDAIHVGASASEL-----PEILVDLLAENGKLII 191 (227)
T ss_dssp GGGCCHHHHHHHCCEEEEEECSBBSSC-----CHHHHHHEEEEEEEEE
T ss_pred hHhcccccCccCCCcCEEEECCchHHH-----HHHHHHhcCCCcEEEE
Confidence 87755 556789999999998875 4788999999999985
No 175
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.27 E-value=9.3e-12 Score=104.56 Aligned_cols=82 Identities=13% Similarity=0.206 Sum_probs=65.5
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEccc--
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLS-- 198 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~-- 198 (223)
++.+|||+|||+|.++..++ .+|+|+|+|+ .++.++.+|+... +++++||+|++...
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCCB
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-cccCCccEEEECCCCC
Confidence 56899999999999988876 4799999996 2578888888763 44678999999843
Q ss_pred -----------ccCC-------------CHHHHHHHHHHccCCCCEEEc
Q 027441 199 -----------LMGI-------------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 -----------l~~~-------------d~~~~l~e~~rvLkpgG~lvi 223 (223)
++|. +...++.++.++|+|||+|++
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~ 236 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLL 236 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3322 235889999999999999975
No 176
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.27 E-value=6.4e-12 Score=106.04 Aligned_cols=79 Identities=15% Similarity=0.195 Sum_probs=66.5
Q ss_pred CCCeEEEECCcchHHHHHhc---C-ceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEccccc
Q 027441 141 PSLVIADFGCGDARLAKSVK---N-KVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~-~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~ 200 (223)
++.+|||+|||+|.++..++ . +|+|+|+++ ..+.++.+|+..++. +.+||+|++....
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~- 202 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVV- 202 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCS-
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCch-
Confidence 67899999999999998887 3 599999997 236789999998876 7899999986442
Q ss_pred CCCHHHHHHHHHHccCCCCEEEc
Q 027441 201 GINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+...++.++.++|+|||+|++
T Consensus 203 --~~~~~l~~~~~~LkpgG~l~~ 223 (278)
T 2frn_A 203 --RTHEFIPKALSIAKDGAIIHY 223 (278)
T ss_dssp --SGGGGHHHHHHHEEEEEEEEE
T ss_pred --hHHHHHHHHHHHCCCCeEEEE
Confidence 446899999999999999975
No 177
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.27 E-value=4e-12 Score=106.82 Aligned_cols=86 Identities=14% Similarity=0.213 Sum_probs=66.6
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCCCCCCC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~ 188 (223)
.++..+.. .++.+|||+|||+|.++..++ .+|+++|+++ .++.+..+|+.. +++++
T Consensus 101 ~~~~~~~~-~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~ 178 (275)
T 1yb2_A 101 YIIMRCGL-RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQ 178 (275)
T ss_dssp -----CCC-CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSC
T ss_pred HHHHHcCC-CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCC
Confidence 34444433 367899999999999887765 4799999986 146788889877 66778
Q ss_pred ceeEEEEcccccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++ ++ ++..++.++.++|+|||.|++
T Consensus 179 ~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i 209 (275)
T 1yb2_A 179 MYDAVIA-----DIPDPWNHVQKIASMMKPGSVATF 209 (275)
T ss_dssp CEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEE
T ss_pred CccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEE
Confidence 9999998 34 778999999999999999985
No 178
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.27 E-value=1.2e-11 Score=100.57 Aligned_cols=81 Identities=20% Similarity=0.212 Sum_probs=64.4
Q ss_pred CCCeEEEECCcchHHHHHhc------CceEEEecCC-------------CCCcEEEccCCCCC---CCCCceeEEEEccc
Q 027441 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS-------------NDPSVIACDMSNTP---LNSSSVDVAVFCLS 198 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------~~v~gvDis~-------------~~~~~~~~d~~~lp---~~~~sfD~Vi~~~~ 198 (223)
++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+.... ....+||+|++...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 67899999999999888776 4799999997 46788999997732 12368999997655
Q ss_pred ccCCCHH-HHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFP-NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~-~~l~e~~rvLkpgG~lvi 223 (223)
+.+.. .++.++.++|+|||.|++
T Consensus 153 --~~~~~~~~l~~~~~~LkpgG~l~~ 176 (227)
T 1g8a_A 153 --QPTQAKILIDNAEVYLKRGGYGMI 176 (227)
T ss_dssp --STTHHHHHHHHHHHHEEEEEEEEE
T ss_pred --CHhHHHHHHHHHHHhcCCCCEEEE
Confidence 33333 559999999999999975
No 179
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.26 E-value=6.9e-12 Score=101.81 Aligned_cols=88 Identities=17% Similarity=0.148 Sum_probs=69.7
Q ss_pred HHHHHHh-ccCCCCeEEEECCcchHHHHHhc------CceEEEecCC--------------------CCCcEEEccCCCC
Q 027441 131 IIVKWLK-DHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS--------------------NDPSVIACDMSNT 183 (223)
Q Consensus 131 ~i~~~l~-~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~--------------------~~~~~~~~d~~~l 183 (223)
.++..+. ...++.+|||||||+|.++..++ .+|+++|+++ .++.+..+|+...
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 4455554 23467899999999999888775 3799999986 1567888888766
Q ss_pred CCCCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 184 PLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 184 p~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+..+++||+|++..+++++ +.++.++|+|||.|++
T Consensus 146 ~~~~~~fD~i~~~~~~~~~-----~~~~~~~LkpgG~lv~ 180 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVV-----PQALIDQLKPGGRLIL 180 (226)
T ss_dssp CGGGCCEEEEEECSBBSSC-----CHHHHHTEEEEEEEEE
T ss_pred cccCCCcCEEEECCchHHH-----HHHHHHhcCCCcEEEE
Confidence 6567889999999998775 3688999999999985
No 180
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.26 E-value=3.7e-12 Score=105.34 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=65.1
Q ss_pred CCCeEEEECCcchHHHHHhc-------CceEEEecCC-----------CC------------------------------
Q 027441 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVS-----------ND------------------------------ 172 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-------~~v~gvDis~-----------~~------------------------------ 172 (223)
++.+|||+|||+|.++..++ .+|+|+|+++ ..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 45799999999999887765 3699999996 12
Q ss_pred ---Cc-------------EEEccCCCCCC-----CCCceeEEEEcccccCC-C---------HHHHHHHHHHccCCCCEE
Q 027441 173 ---PS-------------VIACDMSNTPL-----NSSSVDVAVFCLSLMGI-N---------FPNYLQEAQRVLKPRGEE 221 (223)
Q Consensus 173 ---~~-------------~~~~d~~~lp~-----~~~sfD~Vi~~~~l~~~-d---------~~~~l~e~~rvLkpgG~l 221 (223)
+. +..+|+..... ...+||+|++...+++. + ...++.++.++|+|||+|
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 45 88899876431 34589999998776654 2 348999999999999999
Q ss_pred Ec
Q 027441 222 QI 223 (223)
Q Consensus 222 vi 223 (223)
+|
T Consensus 211 ~~ 212 (250)
T 1o9g_A 211 AV 212 (250)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 181
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.26 E-value=6.5e-12 Score=102.32 Aligned_cols=88 Identities=13% Similarity=0.185 Sum_probs=69.5
Q ss_pred HHHHHHHh-ccCCCCeEEEECCcchHHHHHhc----C-------ceEEEecCC--------------------CCCcEEE
Q 027441 130 NIIVKWLK-DHSPSLVIADFGCGDARLAKSVK----N-------KVFSFDLVS--------------------NDPSVIA 177 (223)
Q Consensus 130 ~~i~~~l~-~~~~~~~ILDiGcG~G~~a~~la----~-------~v~gvDis~--------------------~~~~~~~ 177 (223)
..+++.+. ...++.+|||||||+|.++..++ . +|+++|+++ .++.+..
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 44555554 23467899999999999888776 2 799999996 1567888
Q ss_pred ccCCCCCCCC-CceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 178 CDMSNTPLNS-SSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 178 ~d~~~lp~~~-~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|+.. ++++ ++||+|++..+++|+. .++.++|+|||.|++
T Consensus 152 ~d~~~-~~~~~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG~lvi 192 (227)
T 1r18_A 152 GDGRK-GYPPNAPYNAIHVGAAAPDTP-----TELINQLASGGRLIV 192 (227)
T ss_dssp SCGGG-CCGGGCSEEEEEECSCBSSCC-----HHHHHTEEEEEEEEE
T ss_pred CCccc-CCCcCCCccEEEECCchHHHH-----HHHHHHhcCCCEEEE
Confidence 88876 4444 7899999999998864 688999999999985
No 182
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.25 E-value=9.7e-12 Score=102.61 Aligned_cols=88 Identities=17% Similarity=0.170 Sum_probs=70.8
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCCCCCCC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~ 188 (223)
.++..+.. .++.+|||+|||+|.++..++ .+|+++|+++ .++.+..+|+...+++++
T Consensus 87 ~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 165 (258)
T 2pwy_A 87 AMVTLLDL-APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEA 165 (258)
T ss_dssp HHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTT
T ss_pred HHHHHcCC-CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC
Confidence 44444443 377899999999999887765 4799999986 246788899988888888
Q ss_pred ceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++. .-++..++.++.++|+|||.|++
T Consensus 166 ~~D~v~~~----~~~~~~~l~~~~~~L~~gG~l~~ 196 (258)
T 2pwy_A 166 AYDGVALD----LMEPWKVLEKAALALKPDRFLVA 196 (258)
T ss_dssp CEEEEEEE----SSCGGGGHHHHHHHEEEEEEEEE
T ss_pred CcCEEEEC----CcCHHHHHHHHHHhCCCCCEEEE
Confidence 99999973 22667999999999999999975
No 183
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.25 E-value=1.3e-11 Score=106.56 Aligned_cols=89 Identities=20% Similarity=0.279 Sum_probs=66.2
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC--------------------------CCCcEEE
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS--------------------------NDPSVIA 177 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~--------------------------~~~~~~~ 177 (223)
..++..+.. .++.+|||+|||+|.++..++ .+|+++|+++ .++.+..
T Consensus 95 ~~~l~~l~~-~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 95 NMILSMMDI-NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHTC-CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHhcCC-CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 345555543 378899999999999888775 4799999986 2578889
Q ss_pred ccCCCC--CCCCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 178 CDMSNT--PLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 178 ~d~~~l--p~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|+... ++++++||+|++... ++..++.++.++|+|||.|++
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~----~~~~~l~~~~~~LkpgG~lv~ 217 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDML----NPHVTLPVFYPHLKHGGVCAV 217 (336)
T ss_dssp SCTTCCC-------EEEEEECSS----STTTTHHHHGGGEEEEEEEEE
T ss_pred CChHHcccccCCCCeeEEEECCC----CHHHHHHHHHHhcCCCcEEEE
Confidence 999876 566778999998543 344589999999999999975
No 184
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.24 E-value=8.6e-12 Score=103.07 Aligned_cols=87 Identities=23% Similarity=0.342 Sum_probs=68.9
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CC-CcEEEccCCCCCCCCC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------ND-PSVIACDMSNTPLNSS 188 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~-~~~~~~d~~~lp~~~~ 188 (223)
.++..+.. .++.+|||+|||+|.++..++ .+|+++|+++ .+ +.+..+|+... +++.
T Consensus 84 ~i~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~ 161 (255)
T 3mb5_A 84 LIVAYAGI-SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEE 161 (255)
T ss_dssp HHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCC
T ss_pred HHHHhhCC-CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCC
Confidence 44444443 377899999999999888775 4799999996 23 78888898754 6778
Q ss_pred ceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++.. .++..++.++.++|+|||.|++
T Consensus 162 ~~D~v~~~~----~~~~~~l~~~~~~L~~gG~l~~ 192 (255)
T 3mb5_A 162 NVDHVILDL----PQPERVVEHAAKALKPGGFFVA 192 (255)
T ss_dssp SEEEEEECS----SCGGGGHHHHHHHEEEEEEEEE
T ss_pred CcCEEEECC----CCHHHHHHHHHHHcCCCCEEEE
Confidence 899999732 2667899999999999999985
No 185
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.24 E-value=7e-12 Score=104.99 Aligned_cols=88 Identities=23% Similarity=0.294 Sum_probs=70.5
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC------------------CCCcEEEccCCCCCCC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS------------------NDPSVIACDMSNTPLN 186 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~------------------~~~~~~~~d~~~lp~~ 186 (223)
.++..+.. .++.+|||+|||+|.++..++ .+|+++|+++ .++.+..+|+...+++
T Consensus 90 ~i~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~ 168 (280)
T 1i9g_A 90 QIVHEGDI-FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP 168 (280)
T ss_dssp HHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC
T ss_pred HHHHHcCC-CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCC
Confidence 44444443 377899999999999887765 4799999985 1467888999888888
Q ss_pred CCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 187 SSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 187 ~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+++||+|++.. .++..++.++.++|+|||.|++
T Consensus 169 ~~~~D~v~~~~----~~~~~~l~~~~~~L~pgG~l~~ 201 (280)
T 1i9g_A 169 DGSVDRAVLDM----LAPWEVLDAVSRLLVAGGVLMV 201 (280)
T ss_dssp TTCEEEEEEES----SCGGGGHHHHHHHEEEEEEEEE
T ss_pred CCceeEEEECC----cCHHHHHHHHHHhCCCCCEEEE
Confidence 88999999832 2677999999999999999975
No 186
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.23 E-value=1.8e-12 Score=119.90 Aligned_cols=83 Identities=13% Similarity=0.201 Sum_probs=65.0
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcEEEccCCCC--CCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNT--PLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~l--p~~~~sfD~Vi~~~~l 199 (223)
..+.+|||||||+|.++..|+ ..|+|+|+++ .++.|.+++++++ ++.+++||+|+|..++
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 356899999999999999998 6899999997 2467888888877 5678899999999999
Q ss_pred cCC-CHH--HHHHHHHHccCCCCEEE
Q 027441 200 MGI-NFP--NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 200 ~~~-d~~--~~l~e~~rvLkpgG~lv 222 (223)
||+ |+. ..+..+.+.|.++|..+
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAV 170 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEE
T ss_pred hcCCCHHHHHHHHHHHHHhcccccee
Confidence 999 554 22334555566665443
No 187
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.23 E-value=5.2e-12 Score=102.34 Aligned_cols=91 Identities=12% Similarity=0.086 Sum_probs=68.2
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCC-C-CC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-P-LN 186 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~l-p-~~ 186 (223)
.++..+....++.+|||||||+|.++..++ .+|+++|+++ .++.++.+|+... + +.
T Consensus 48 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 127 (223)
T 3duw_A 48 KFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIE 127 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence 344444333367899999999999998886 3799999996 2477888887542 1 11
Q ss_pred ---CCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 187 ---SSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 187 ---~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.++||+|++..... ..+.++.++.++|+|||+|++
T Consensus 128 ~~~~~~fD~v~~d~~~~--~~~~~l~~~~~~L~pgG~lv~ 165 (223)
T 3duw_A 128 NEKYEPFDFIFIDADKQ--NNPAYFEWALKLSRPGTVIIG 165 (223)
T ss_dssp HTTCCCCSEEEECSCGG--GHHHHHHHHHHTCCTTCEEEE
T ss_pred hcCCCCcCEEEEcCCcH--HHHHHHHHHHHhcCCCcEEEE
Confidence 26799999876522 567999999999999999875
No 188
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.22 E-value=1.9e-11 Score=103.19 Aligned_cols=83 Identities=14% Similarity=0.220 Sum_probs=64.4
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEec-CC---------C----------------CCcEEEccCCCCC--C---
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDL-VS---------N----------------DPSVIACDMSNTP--L--- 185 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDi-s~---------~----------------~~~~~~~d~~~lp--~--- 185 (223)
++.+|||||||+|.++..++ .+|+|+|+ ++ . ++.+...+..+.. +
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 66899999999999988776 37999999 65 1 2334433433211 1
Q ss_pred -CCCceeEEEEcccccCC-CHHHHHHHHHHccC---C--CCEEEc
Q 027441 186 -NSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLK---P--RGEEQI 223 (223)
Q Consensus 186 -~~~sfD~Vi~~~~l~~~-d~~~~l~e~~rvLk---p--gG~lvi 223 (223)
.+.+||+|+++.+++|. +...++..+.++|+ | ||.++|
T Consensus 159 ~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred ccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 35789999999999988 88899999999999 9 997654
No 189
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.22 E-value=8.6e-12 Score=103.56 Aligned_cols=91 Identities=13% Similarity=0.087 Sum_probs=69.0
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCC-C-C-
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-P-L- 185 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~l-p-~- 185 (223)
.++..+....+..+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... + +
T Consensus 69 ~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~ 148 (247)
T 1sui_A 69 QFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMI 148 (247)
T ss_dssp HHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHH
Confidence 344444333367899999999999888775 4799999997 2466888887542 3 2
Q ss_pred ----CCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 186 ----NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 186 ----~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.+++||+|++... ..+...++.++.++|+|||+|++
T Consensus 149 ~~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~ 188 (247)
T 1sui_A 149 KDEKNHGSYDFIFVDAD--KDNYLNYHKRLIDLVKVGGVIGY 188 (247)
T ss_dssp HSGGGTTCBSEEEECSC--STTHHHHHHHHHHHBCTTCCEEE
T ss_pred hccCCCCCEEEEEEcCc--hHHHHHHHHHHHHhCCCCeEEEE
Confidence 1578999998754 23678999999999999999974
No 190
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.22 E-value=1.6e-11 Score=101.50 Aligned_cols=83 Identities=20% Similarity=0.338 Sum_probs=65.4
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-----------------------CCCcEEEccCCC-CC--CCCCc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-----------------------NDPSVIACDMSN-TP--LNSSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-----------------------~~~~~~~~d~~~-lp--~~~~s 189 (223)
++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+.. ++ +..++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 56799999999999998887 3699999984 256788999976 66 77889
Q ss_pred eeEEEEcccccCC---------CHHHHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMGI---------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~~---------d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|.|+....-.+. -...++.++.++|+|||.|++
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 9999855432221 015899999999999999985
No 191
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.21 E-value=2.1e-11 Score=102.85 Aligned_cols=93 Identities=15% Similarity=0.120 Sum_probs=67.3
Q ss_pred HHHHHHhccCCCCeEEEECCcc---hHHHH---Hhc--CceEEEecCC---------------CCCcEEEccCCCCC---
Q 027441 131 IIVKWLKDHSPSLVIADFGCGD---ARLAK---SVK--NKVFSFDLVS---------------NDPSVIACDMSNTP--- 184 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~---G~~a~---~la--~~v~gvDis~---------------~~~~~~~~d~~~lp--- 184 (223)
.+..++........|||||||+ |.... .+. .+|+++|.|+ .++.|+.+|+.+++
T Consensus 68 rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l 147 (277)
T 3giw_A 68 RAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASIL 147 (277)
T ss_dssp HHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHH
T ss_pred HHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhh
Confidence 3445555322447899999997 33332 222 6899999997 14678999998752
Q ss_pred ---CCCCcee-----EEEEcccccCC-C---HHHHHHHHHHccCCCCEEEc
Q 027441 185 ---LNSSSVD-----VAVFCLSLMGI-N---FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 185 ---~~~~sfD-----~Vi~~~~l~~~-d---~~~~l~e~~rvLkpgG~lvi 223 (223)
.....|| .|++..+|||+ + +..+|.++.++|+|||+|+|
T Consensus 148 ~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvl 198 (277)
T 3giw_A 148 DAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAM 198 (277)
T ss_dssp TCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEE
T ss_pred cccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEE
Confidence 1134455 68899999999 4 56899999999999999985
No 192
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.20 E-value=4.4e-12 Score=102.83 Aligned_cols=90 Identities=14% Similarity=0.150 Sum_probs=67.2
Q ss_pred HHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCC-C-CC-
Q 027441 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-P-LN- 186 (223)
Q Consensus 132 i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~l-p-~~- 186 (223)
++..+....++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... + +.
T Consensus 55 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 134 (225)
T 3tr6_A 55 LLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIH 134 (225)
T ss_dssp HHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhh
Confidence 34444333367899999999999998886 3699999996 2477888887442 2 11
Q ss_pred ---CCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 187 ---SSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 187 ---~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.++||+|++... ..+...++.++.++|+|||+|++
T Consensus 135 ~~~~~~fD~v~~~~~--~~~~~~~l~~~~~~L~pgG~lv~ 172 (225)
T 3tr6_A 135 AGQAWQYDLIYIDAD--KANTDLYYEESLKLLREGGLIAV 172 (225)
T ss_dssp TTCTTCEEEEEECSC--GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCCCccEEEECCC--HHHHHHHHHHHHHhcCCCcEEEE
Confidence 178999996553 12577899999999999999975
No 193
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.20 E-value=4e-11 Score=98.30 Aligned_cols=88 Identities=16% Similarity=0.257 Sum_probs=68.9
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC----------------CCCcEEEccCCCCCCCCCcee
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVD 191 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD 191 (223)
.++..+.. .++.+|||+|||+|.++..++ .+|+++|+++ .++.+..+|+....+++..||
T Consensus 82 ~~~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 160 (248)
T 2yvl_A 82 YIALKLNL-NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFH 160 (248)
T ss_dssp HHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBS
T ss_pred HHHHhcCC-CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCccc
Confidence 34444433 367899999999999888776 6899999996 256778888877554667899
Q ss_pred EEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|++... ++..++.++.++|+|||.|++
T Consensus 161 ~v~~~~~----~~~~~l~~~~~~L~~gG~l~~ 188 (248)
T 2yvl_A 161 AAFVDVR----EPWHYLEKVHKSLMEGAPVGF 188 (248)
T ss_dssp EEEECSS----CGGGGHHHHHHHBCTTCEEEE
T ss_pred EEEECCc----CHHHHHHHHHHHcCCCCEEEE
Confidence 9997322 667899999999999999975
No 194
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.20 E-value=3.8e-11 Score=102.32 Aligned_cols=83 Identities=16% Similarity=0.125 Sum_probs=63.3
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC--------------------CCCcEEEccCCCC-CCCCCceeEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------------NDPSVIACDMSNT-PLNSSSVDVAV 194 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------------------~~~~~~~~d~~~l-p~~~~sfD~Vi 194 (223)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+... +..+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 56899999999999998886 3699999997 2567888898664 44568899999
Q ss_pred EcccccCCC-----HHHHHHHHHHccCCCCEEEc
Q 027441 195 FCLSLMGIN-----FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 195 ~~~~l~~~d-----~~~~l~e~~rvLkpgG~lvi 223 (223)
+........ ...++.++.++|+|||+|++
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 196 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEE
Confidence 965543221 16899999999999999975
No 195
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.19 E-value=1.9e-11 Score=105.03 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=69.3
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CCCcEEEccCCCCCCCCCc
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSS 189 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~s 189 (223)
.+...+....++.+|||+|||+|..+..++ .+|+|+|+++ .++.++.+|+..++..+++
T Consensus 108 ~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 187 (315)
T 1ixk_A 108 MYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVE 187 (315)
T ss_dssp HHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCC
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccccccc
Confidence 333333344477899999999999888776 4699999997 3677888998887655678
Q ss_pred eeEEEEcc------cccCC-C----------------HHHHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCL------SLMGI-N----------------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~------~l~~~-d----------------~~~~l~e~~rvLkpgG~lvi 223 (223)
||+|++.. ++++. + ...+|.++.++|+|||.|++
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~ 244 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVY 244 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 99999842 22221 1 14899999999999999974
No 196
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.19 E-value=5.7e-11 Score=103.49 Aligned_cols=81 Identities=22% Similarity=0.300 Sum_probs=67.3
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEEEEcccccC
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~ 201 (223)
...+|||||||+|.++..++ .+++.+|+.. .++.++.+|+...|++ .+|+|++..+||+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh~ 256 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLHD 256 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGGG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeeccc
Confidence 55799999999999999887 3577788642 5788999999876655 4799999999998
Q ss_pred C-CH--HHHHHHHHHccCCCCEEEc
Q 027441 202 I-NF--PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~-d~--~~~l~e~~rvLkpgG~lvi 223 (223)
+ |. ..+|.++++.|+|||.|+|
T Consensus 257 ~~d~~~~~iL~~~~~al~pgg~lli 281 (353)
T 4a6d_A 257 WADGKCSHLLERIYHTCKPGGGILV 281 (353)
T ss_dssp SCHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 8 33 4789999999999999886
No 197
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.19 E-value=8.8e-12 Score=103.82 Aligned_cols=81 Identities=20% Similarity=0.273 Sum_probs=64.8
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCCC--------------CCcEEEccCCCCCCCCCceeEEEEcccccCC
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN--------------DPSVIACDMSNTPLNSSSVDVAVFCLSLMGI 202 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~~--------------~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~ 202 (223)
.++.+|||+|||+|.++..++ .+|+|+|+++. .+.+..+|+... +++++||+|++....++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~- 196 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAEL- 196 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHHH-
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHHH-
Confidence 367899999999999988776 48999999971 166777776552 44678999998765543
Q ss_pred CHHHHHHHHHHccCCCCEEEc
Q 027441 203 NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 203 d~~~~l~e~~rvLkpgG~lvi 223 (223)
...++.++.++|+|||.|++
T Consensus 197 -~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 197 -HAALAPRYREALVPGGRALL 216 (254)
T ss_dssp -HHHHHHHHHHHEEEEEEEEE
T ss_pred -HHHHHHHHHHHcCCCCEEEE
Confidence 46899999999999999985
No 198
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.18 E-value=2.9e-11 Score=101.76 Aligned_cols=81 Identities=17% Similarity=0.225 Sum_probs=68.4
Q ss_pred cCCCCeEEEECCcchHHHHHhc---C--ceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEccc
Q 027441 139 HSPSLVIADFGCGDARLAKSVK---N--KVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (223)
Q Consensus 139 ~~~~~~ILDiGcG~G~~a~~la---~--~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~ 198 (223)
..++.+|||+|||+|.++..++ . +|+|+|+++ .++.++.+|+..++. ...||+|++...
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p 195 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYV 195 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCc
Confidence 3467899999999999998887 2 899999996 356788999987754 678999998876
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. +...++.++.++|+|||+|++
T Consensus 196 ~---~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 196 H---KTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp S---SGGGGHHHHHHHEEEEEEEEE
T ss_pred c---cHHHHHHHHHHHcCCCCEEEE
Confidence 4 667899999999999999975
No 199
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.17 E-value=1.4e-11 Score=100.98 Aligned_cols=81 Identities=14% Similarity=0.136 Sum_probs=64.3
Q ss_pred CCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCC----CCCCC--CceeE
Q 027441 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSN----TPLNS--SSVDV 192 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~----lp~~~--~sfD~ 192 (223)
++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+.. ++..+ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 56899999999999988886 2799999997 246777887633 33334 78999
Q ss_pred EEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
|++.... .++..++.++.++|+|||+|++
T Consensus 152 V~~d~~~--~~~~~~l~~~~~~LkpgG~lv~ 180 (232)
T 3cbg_A 152 IFIDADK--RNYPRYYEIGLNLLRRGGLMVI 180 (232)
T ss_dssp EEECSCG--GGHHHHHHHHHHTEEEEEEEEE
T ss_pred EEECCCH--HHHHHHHHHHHHHcCCCeEEEE
Confidence 9987552 2678999999999999999985
No 200
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.16 E-value=1.2e-11 Score=105.90 Aligned_cols=83 Identities=17% Similarity=0.113 Sum_probs=64.6
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------------CCCcEEEccCCCCCC--CCCceeEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSNTPL--NSSSVDVAV 194 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------------~~~~~~~~d~~~lp~--~~~sfD~Vi 194 (223)
++.+|||||||+|.++..++ .+|+++|+++ .++.++.+|+..++. .+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 56899999999999999886 3799999985 246778888866543 478999999
Q ss_pred EcccccCCC-H----HHHHHHHHHccCCCCEEEc
Q 027441 195 FCLSLMGIN-F----PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 195 ~~~~l~~~d-~----~~~l~e~~rvLkpgG~lvi 223 (223)
+....++.. . ..++.++.++|+|||+|++
T Consensus 175 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 208 (304)
T 3bwc_A 175 IDTTDPAGPASKLFGEAFYKDVLRILKPDGICCN 208 (304)
T ss_dssp EECC---------CCHHHHHHHHHHEEEEEEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 976655432 1 5899999999999999985
No 201
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.16 E-value=1.1e-10 Score=99.34 Aligned_cols=83 Identities=12% Similarity=0.104 Sum_probs=63.2
Q ss_pred CCCCeEEEECC------cchH-HHHHh-c--CceEEEecCC--CCCcE-EEccCCCCCCCCCceeEEEEcccccC-----
Q 027441 140 SPSLVIADFGC------GDAR-LAKSV-K--NKVFSFDLVS--NDPSV-IACDMSNTPLNSSSVDVAVFCLSLMG----- 201 (223)
Q Consensus 140 ~~~~~ILDiGc------G~G~-~a~~l-a--~~v~gvDis~--~~~~~-~~~d~~~lp~~~~sfD~Vi~~~~l~~----- 201 (223)
.++.+|||||| |+|. ++..+ . .+|+|+|+++ .++.+ +.+|+..+++. ++||+|++....++
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~v~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~~g~~~ 140 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTA-NKWDLIISDMYDPRTKHVT 140 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGCCCS-SCEEEEEECCCCCC---CC
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCCCCCCEEEEECccccCCcc-CcccEEEEcCCcccccccc
Confidence 46789999999 5565 22222 1 5799999998 46788 99999888764 78999999754332
Q ss_pred ------C-CHHHHHHHHHHccCCCCEEEc
Q 027441 202 ------I-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ------~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
. .+..++.++.++|+|||.|++
T Consensus 141 ~d~~~~~~l~~~~l~~a~r~LkpGG~~v~ 169 (290)
T 2xyq_A 141 KENDSKEGFFTYLCGFIKQKLALGGSIAV 169 (290)
T ss_dssp SCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccchHHHHHHHHHHHHHhcCCCcEEEE
Confidence 1 135899999999999999985
No 202
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.15 E-value=8.9e-11 Score=93.53 Aligned_cols=76 Identities=16% Similarity=0.152 Sum_probs=60.7
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC----------CCCcEEEccCCCCCCCCCceeEEEEcccccCCC---
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGIN--- 203 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d--- 203 (223)
++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+..+| ++||+|++...++|..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~ 127 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHS 127 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-------
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccCch
Confidence 56899999999999988886 3699999997 26889999998875 6899999999999883
Q ss_pred HHHHHHHHHHccCCCCEE
Q 027441 204 FPNYLQEAQRVLKPRGEE 221 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~l 221 (223)
...++.++.++| |+++
T Consensus 128 ~~~~l~~~~~~~--g~~~ 143 (200)
T 1ne2_A 128 DRAFIDKAFETS--MWIY 143 (200)
T ss_dssp CHHHHHHHHHHE--EEEE
T ss_pred hHHHHHHHHHhc--CcEE
Confidence 347899999998 5544
No 203
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.14 E-value=4.1e-11 Score=100.59 Aligned_cols=87 Identities=21% Similarity=0.283 Sum_probs=67.9
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCCCCCCC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~ 188 (223)
.++..+.. .++.+|||+|||+|.++..++ .+|+++|+++ .++.+..+|+... ++++
T Consensus 103 ~i~~~~~~-~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~ 180 (277)
T 1o54_A 103 FIAMMLDV-KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEK 180 (277)
T ss_dssp HHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCC
T ss_pred HHHHHhCC-CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCC
Confidence 44444443 367899999999999887765 4799999986 2466778888765 6667
Q ss_pred ceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++.. -++..++.++.++|+|||.|++
T Consensus 181 ~~D~V~~~~----~~~~~~l~~~~~~L~pgG~l~~ 211 (277)
T 1o54_A 181 DVDALFLDV----PDPWNYIDKCWEALKGGGRFAT 211 (277)
T ss_dssp SEEEEEECC----SCGGGTHHHHHHHEEEEEEEEE
T ss_pred ccCEEEECC----cCHHHHHHHHHHHcCCCCEEEE
Confidence 899999832 2566999999999999999975
No 204
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.14 E-value=2.9e-11 Score=98.23 Aligned_cols=89 Identities=18% Similarity=0.177 Sum_probs=67.3
Q ss_pred HHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCC--CCCC-
Q 027441 133 VKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT--PLNS- 187 (223)
Q Consensus 133 ~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~l--p~~~- 187 (223)
+..+....++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... .+.+
T Consensus 61 l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~ 140 (229)
T 2avd_A 61 LANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAA 140 (229)
T ss_dssp HHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhc
Confidence 3333333467899999999999988886 3799999997 2567788877442 1211
Q ss_pred ---CceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 188 ---SSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ---~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
++||+|++... ..+...++.++.++|+|||+|++
T Consensus 141 ~~~~~~D~v~~d~~--~~~~~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 141 GEAGTFDVAVVDAD--KENCSAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp TCTTCEEEEEECSC--STTHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCccEEEECCC--HHHHHHHHHHHHHHcCCCeEEEE
Confidence 68999998654 23678999999999999999975
No 205
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.14 E-value=9.5e-12 Score=102.93 Aligned_cols=82 Identities=10% Similarity=0.041 Sum_probs=57.9
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCC---CCC---CCceeEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNT---PLN---SSSVDVA 193 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~l---p~~---~~sfD~V 193 (223)
++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+.+. +++ +.+||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 46799999999999887765 4799999996 2378889997652 454 3689999
Q ss_pred EEcccccCCC----------------HHHHHHHHHHccCCCCEEE
Q 027441 194 VFCLSLMGIN----------------FPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 194 i~~~~l~~~d----------------~~~~l~e~~rvLkpgG~lv 222 (223)
++...+++.. ...++.++.++|+|||.|+
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~ 189 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELE 189 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEE
Confidence 9986555332 1245778899999998764
No 206
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.13 E-value=1.2e-10 Score=101.37 Aligned_cols=84 Identities=19% Similarity=0.177 Sum_probs=69.1
Q ss_pred CCCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~ 198 (223)
.++..|||+|||+|.++..++ ..|+|+|+++ .++.+..+|+.+++.+...||+|++...
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP 281 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPP 281 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCC
Confidence 367899999999999877665 4799999997 2688999999998877788999999655
Q ss_pred ccCC---------CHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGI---------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~---------d~~~~l~e~~rvLkpgG~lvi 223 (223)
+... ....++.++.++|+|||.++|
T Consensus 282 yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i 315 (354)
T 3tma_A 282 HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVAL 315 (354)
T ss_dssp SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEE
T ss_pred CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 4322 136899999999999999985
No 207
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.12 E-value=1.9e-11 Score=105.93 Aligned_cols=93 Identities=12% Similarity=0.062 Sum_probs=68.7
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------C--CCcEEEccCCCCCC----C
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------N--DPSVIACDMSNTPL----N 186 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~--~~~~~~~d~~~lp~----~ 186 (223)
.+.+.+....++.+|||+|||+|.++..++ .+|+++|+|+ . ++.++.+|+..+.. .
T Consensus 143 ~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~ 222 (332)
T 2igt_A 143 WLKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERR 222 (332)
T ss_dssp HHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhc
Confidence 345555423356799999999999998887 4899999997 1 37788888866431 1
Q ss_pred CCceeEEEEccc----------ccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 187 SSSVDVAVFCLS----------LMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 187 ~~sfD~Vi~~~~----------l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
..+||+|++.-. +++. +...++.++.++|+|||+|++
T Consensus 223 ~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli 270 (332)
T 2igt_A 223 GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLV 270 (332)
T ss_dssp TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEE
T ss_pred CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEE
Confidence 468999998432 1222 567999999999999999764
No 208
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.11 E-value=1.9e-10 Score=97.35 Aligned_cols=89 Identities=16% Similarity=0.147 Sum_probs=66.0
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCce
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSV 190 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sf 190 (223)
.+++.+... ++.+|||+|||+|.++..++ .+|+|+|+|+ .++.++.+|+... ++ ++|
T Consensus 114 ~~l~~~~~~-~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f 190 (284)
T 1nv8_A 114 LALELIRKY-GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKF 190 (284)
T ss_dssp HHHHHHHHH-TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGT
T ss_pred HHHHHhccc-CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-ccc
Confidence 344444333 56799999999999988886 4799999997 1378899998762 22 578
Q ss_pred ---eEEEEcc------------cccCC---------CHHHHHHHHH-HccCCCCEEEc
Q 027441 191 ---DVAVFCL------------SLMGI---------NFPNYLQEAQ-RVLKPRGEEQI 223 (223)
Q Consensus 191 ---D~Vi~~~------------~l~~~---------d~~~~l~e~~-rvLkpgG~lvi 223 (223)
|+|++.- +. |. +...++.++. +.|+|||.|++
T Consensus 191 ~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 191 ASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp TTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred CCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 9999962 22 22 1227899999 99999999985
No 209
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.11 E-value=1.6e-10 Score=103.87 Aligned_cols=93 Identities=16% Similarity=0.297 Sum_probs=69.9
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CCCcEEEccCCCCC--CCC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTP--LNS 187 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~~~~~~~d~~~lp--~~~ 187 (223)
.+...+....++.+|||+|||+|..+..++ ..|+|+|+++ .++.++.+|+..++ +++
T Consensus 249 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 328 (450)
T 2yxl_A 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGE 328 (450)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCS
T ss_pred HHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhcc
Confidence 333333334477899999999999888776 4799999997 36778889998876 556
Q ss_pred CceeEEEE------cccccCC-CH----------------HHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVF------CLSLMGI-NF----------------PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~------~~~l~~~-d~----------------~~~l~e~~rvLkpgG~lvi 223 (223)
++||+|++ ..++++. +. ..+|.++.++|+|||.|++
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy 387 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLY 387 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 78999996 2233322 22 4789999999999999974
No 210
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.11 E-value=8.2e-11 Score=101.17 Aligned_cols=81 Identities=19% Similarity=0.214 Sum_probs=64.6
Q ss_pred CeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCCC--CCCCCceeEEEEccccc
Q 027441 143 LVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNT--PLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~l--p~~~~sfD~Vi~~~~l~ 200 (223)
.+|||||||+|.++..++ .+|+++|+++ .++.++.+|+..+ .+++++||+|++....+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 499999999999998886 3789999997 3567888887654 34568999999865443
Q ss_pred CC-----CHHHHHHHHHHccCCCCEEEc
Q 027441 201 GI-----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~-----d~~~~l~e~~rvLkpgG~lvi 223 (223)
+. ....++.++.++|+|||+|++
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~ 198 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVA 198 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 22 236899999999999999985
No 211
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.10 E-value=6.3e-11 Score=97.26 Aligned_cols=81 Identities=20% Similarity=0.203 Sum_probs=63.6
Q ss_pred CCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCC-CC-------------
Q 027441 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSN-TP------------- 184 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~-lp------------- 184 (223)
++.+|||||||+|..+..++ .+|+++|+++ .++.+..+|+.. ++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 67899999999999888775 4799999997 126777777643 12
Q ss_pred -CCC--CceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 185 -LNS--SSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 185 -~~~--~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
|++ ++||+|++..... +.+.++.++.++|+|||+|++
T Consensus 140 ~f~~~~~~fD~I~~~~~~~--~~~~~l~~~~~~L~pgG~lv~ 179 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADKE--NYPNYYPLILKLLKPGGLLIA 179 (239)
T ss_dssp TTCCSTTCEEEEEECSCGG--GHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCCCCcCEEEEeCCHH--HHHHHHHHHHHHcCCCeEEEE
Confidence 233 7899999875432 567899999999999999985
No 212
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.09 E-value=3.9e-11 Score=101.72 Aligned_cols=92 Identities=23% Similarity=0.221 Sum_probs=67.0
Q ss_pred hHHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC----------------CCCcEEEccCCCCCCCCC
Q 027441 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNSS 188 (223)
Q Consensus 128 ~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~ 188 (223)
..+.|++.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++++
T Consensus 16 i~~~i~~~~~~~-~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~-- 92 (285)
T 1zq9_A 16 IINSIIDKAALR-PTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP-- 92 (285)
T ss_dssp HHHHHHHHTCCC-TTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--
T ss_pred HHHHHHHhcCCC-CCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--
Confidence 345566655443 67899999999999999887 6899999996 1467889999888765
Q ss_pred ceeEEEEcccccCCCHH--HHH--------------HHH--HHccCCCCEEE
Q 027441 189 SVDVAVFCLSLMGINFP--NYL--------------QEA--QRVLKPRGEEQ 222 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~~--~~l--------------~e~--~rvLkpgG~lv 222 (223)
+||+|++...+++..+. .++ .|+ .++|+|||.++
T Consensus 93 ~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 79999997665543111 222 233 37999999754
No 213
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.08 E-value=5.8e-11 Score=97.79 Aligned_cols=90 Identities=13% Similarity=0.126 Sum_probs=67.9
Q ss_pred HHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------CCCcEEEccCCCC-C-C--
Q 027441 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-P-L-- 185 (223)
Q Consensus 132 i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~----------------~~~~~~~~d~~~l-p-~-- 185 (223)
++..+....+..+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... + +
T Consensus 61 ~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~ 140 (237)
T 3c3y_A 61 LMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQ 140 (237)
T ss_dssp HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh
Confidence 44444333467899999999999888775 4799999996 2467788887542 2 2
Q ss_pred ---CCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 186 ---NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 186 ---~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
++++||+|++.... -+...++..+.++|+|||+|++
T Consensus 141 ~~~~~~~fD~I~~d~~~--~~~~~~l~~~~~~L~pGG~lv~ 179 (237)
T 3c3y_A 141 GQESEGSYDFGFVDADK--PNYIKYHERLMKLVKVGGIVAY 179 (237)
T ss_dssp STTCTTCEEEEEECSCG--GGHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCCCCcCEEEECCch--HHHHHHHHHHHHhcCCCeEEEE
Confidence 25789999976432 2678999999999999999975
No 214
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.08 E-value=7.3e-11 Score=99.27 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=66.2
Q ss_pred cCCCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CCCcEEEccCCCCCC----CCCceeEE
Q 027441 139 HSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPL----NSSSVDVA 193 (223)
Q Consensus 139 ~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~~~~~~~d~~~lp~----~~~sfD~V 193 (223)
..++.+|||+|||+|..+..++ .+|+|+|+++ .++.++.+|+..++. ..+.||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 3477899999999999887776 4799999997 357788888877654 25789999
Q ss_pred EEcccccC-------------------CCHHHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLMG-------------------INFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~~-------------------~d~~~~l~e~~rvLkpgG~lvi 223 (223)
++.....+ -....++.++.++|+|||.|++
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 209 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVY 209 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 98622211 1346899999999999999974
No 215
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.07 E-value=8e-11 Score=102.07 Aligned_cols=83 Identities=16% Similarity=0.133 Sum_probs=64.9
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------------CCCcEEEccCCCC--CCCCCceeEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSNT--PLNSSSVDVAV 194 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------------~~~~~~~~d~~~l--p~~~~sfD~Vi 194 (223)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+..+ .+++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 56899999999999999887 3799999986 2467788887553 23467899999
Q ss_pred EcccccC--CC---HHHHHHHHHHccCCCCEEEc
Q 027441 195 FCLSLMG--IN---FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 195 ~~~~l~~--~d---~~~~l~e~~rvLkpgG~lvi 223 (223)
+.....+ .+ ...++.++.++|+|||+|++
T Consensus 200 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 233 (334)
T 1xj5_A 200 VDSSDPIGPAKELFEKPFFQSVARALRPGGVVCT 233 (334)
T ss_dssp ECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEE
T ss_pred ECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 8654221 11 46899999999999999985
No 216
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.06 E-value=3e-10 Score=93.85 Aligned_cols=91 Identities=15% Similarity=0.156 Sum_probs=70.9
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc--CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEE
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK--NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVA 193 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la--~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~V 193 (223)
+.+...+-...+..+|||||||.|.++..+. ..++|+||++ .+..+.++|....|++. +||+|
T Consensus 94 d~fY~~i~~~~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~Dvv 172 (253)
T 3frh_A 94 DTLYDFIFSAETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLA 172 (253)
T ss_dssp HHHHHHHTSSCCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEE
T ss_pred HHHHHHHhcCCCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchH
Confidence 3444444333467899999999999999876 5899999997 34567888998888654 89999
Q ss_pred EEcccccCC---CHHHHHHHHHHccCCCCEEE
Q 027441 194 VFCLSLMGI---NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 194 i~~~~l~~~---d~~~~l~e~~rvLkpgG~lv 222 (223)
++.-++||+ .....+ .+...|+++|+++
T Consensus 173 Lllk~lh~LE~q~~~~~~-~ll~aL~~~~vvV 203 (253)
T 3frh_A 173 LIFKLLPLLEREQAGSAM-ALLQSLNTPRMAV 203 (253)
T ss_dssp EEESCHHHHHHHSTTHHH-HHHHHCBCSEEEE
T ss_pred HHHHHHHHhhhhchhhHH-HHHHHhcCCCEEE
Confidence 999999988 233444 8888999999886
No 217
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.06 E-value=1.2e-10 Score=98.26 Aligned_cols=83 Identities=14% Similarity=0.037 Sum_probs=64.8
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------------CCCcEEEccCCC-CCCCCCceeEEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------------~~~~~~~~d~~~-lp~~~~sfD~Vi~ 195 (223)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+.. ++..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 56899999999999999886 4799999986 245677888754 3334678999999
Q ss_pred cccccCCC-----HHHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGIN-----FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~d-----~~~~l~e~~rvLkpgG~lvi 223 (223)
....++.. ...++.++.++|+|||+|++
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~ 187 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVA 187 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 65543221 25899999999999999985
No 218
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.06 E-value=7.1e-11 Score=101.43 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=66.0
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC--------------------CCCcEEEccCCC-CCCCCCceeEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------------NDPSVIACDMSN-TPLNSSSVDVAV 194 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------------------~~~~~~~~d~~~-lp~~~~sfD~Vi 194 (223)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+.. ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 56899999999999999887 3699999986 135677788755 343467899999
Q ss_pred EcccccC---CC-----HHHHHHHHHHccCCCCEEEc
Q 027441 195 FCLSLMG---IN-----FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 195 ~~~~l~~---~d-----~~~~l~e~~rvLkpgG~lvi 223 (223)
+....++ .. ...++.++.++|+|||+|++
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 193 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGM 193 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEE
Confidence 9876654 21 36899999999999999985
No 219
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.05 E-value=1.6e-10 Score=95.09 Aligned_cols=83 Identities=12% Similarity=0.058 Sum_probs=65.5
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~ 198 (223)
+++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+|......+++.||+|+.+++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 367899999999999999887 3699999997 3578889998776655557999886554
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.- --...++.+..+.|+++|.|++
T Consensus 100 Gg-~lI~~IL~~~~~~l~~~~~lIl 123 (230)
T 3lec_A 100 GG-RLIADILNNDIDKLQHVKTLVL 123 (230)
T ss_dssp CH-HHHHHHHHHTGGGGTTCCEEEE
T ss_pred ch-HHHHHHHHHHHHHhCcCCEEEE
Confidence 21 1235788888999999999885
No 220
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.05 E-value=8.1e-11 Score=97.65 Aligned_cols=83 Identities=16% Similarity=0.037 Sum_probs=64.4
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~ 198 (223)
+++.+|||||||+|.++..++ .+|+|+|+++ ..+.+..+|......++..||+|+.+++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 367899999999999999887 3699999997 2478888998766544446999987544
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.- --...+|.+..+.|+++|+|++
T Consensus 100 Gg-~lI~~IL~~~~~~L~~~~~lIl 123 (244)
T 3gnl_A 100 GG-TLIRTILEEGAAKLAGVTKLIL 123 (244)
T ss_dssp CH-HHHHHHHHHTGGGGTTCCEEEE
T ss_pred ch-HHHHHHHHHHHHHhCCCCEEEE
Confidence 21 0235788899999999999985
No 221
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.04 E-value=1.9e-10 Score=94.32 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=63.2
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCC----------------CCCcEEEccCC-CCCCCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMS-NTPLNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~----------------~~~~~~~~d~~-~lp~~~~sfD~Vi~~~ 197 (223)
+++.+|||||||+|.++..++ .+|+|+|+++ .++.+..+|.. .++. ...||+|+.++
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG 92 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAG 92 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcC
Confidence 367899999999999999887 3799999997 24778888874 4442 23699998765
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+.-. -...++.++...|+|+|+|++
T Consensus 93 ~Gg~-~i~~Il~~~~~~L~~~~~lVl 117 (225)
T 3kr9_A 93 MGGR-LIARILEEGLGKLANVERLIL 117 (225)
T ss_dssp ECHH-HHHHHHHHTGGGCTTCCEEEE
T ss_pred CChH-HHHHHHHHHHHHhCCCCEEEE
Confidence 4211 246889999999999999985
No 222
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.04 E-value=1.4e-10 Score=98.84 Aligned_cols=83 Identities=13% Similarity=0.101 Sum_probs=62.6
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------------CCCcEEEccCCC-CCCCCCceeEEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------------~~~~~~~~d~~~-lp~~~~sfD~Vi~ 195 (223)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+.. ++..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 45899999999999999887 3799999986 245677787654 3444678999998
Q ss_pred cccccCC------CHHHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGI------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~------d~~~~l~e~~rvLkpgG~lvi 223 (223)
...-+++ ....++.++.++|+|||+|++
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 203 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSA 203 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEE
Confidence 5432212 236899999999999999985
No 223
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.03 E-value=6.2e-11 Score=98.00 Aligned_cols=95 Identities=19% Similarity=0.171 Sum_probs=68.3
Q ss_pred chHHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC-------------CCCcEEEccCCCCCCCC-Cc
Q 027441 127 LPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTPLNS-SS 189 (223)
Q Consensus 127 ~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~lp~~~-~s 189 (223)
...+.+++.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++ ++
T Consensus 16 ~~~~~i~~~~~~~-~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~ 94 (245)
T 1yub_A 16 KVLNQIIKQLNLK-ETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQR 94 (245)
T ss_dssp TTHHHHHHHCCCC-SSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSE
T ss_pred HHHHHHHHhcCCC-CCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCC
Confidence 3445666665443 67899999999999988887 5899999997 13567789999988774 68
Q ss_pred eeEEEEccccc-----------CC-CHHHHH----HHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLM-----------GI-NFPNYL----QEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~-----------~~-d~~~~l----~e~~rvLkpgG~lvi 223 (223)
| .|++....+ |. +...++ +.+.|+|+|||.|+|
T Consensus 95 f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 95 Y-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp E-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred c-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 8 666653222 12 333444 779999999998653
No 224
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.03 E-value=8.3e-10 Score=98.58 Aligned_cols=85 Identities=13% Similarity=0.073 Sum_probs=66.5
Q ss_pred cCCCCeEEEECCcchHHHHHhc-----CceEEEecCCC--------------CCcEEEccCCCCC--CCCCceeEEEEc-
Q 027441 139 HSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN--------------DPSVIACDMSNTP--LNSSSVDVAVFC- 196 (223)
Q Consensus 139 ~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~~--------------~~~~~~~d~~~lp--~~~~sfD~Vi~~- 196 (223)
..++.+|||+|||+|..+..++ ..|+|+|+++. ++.++.+|+..++ ++++.||+|++.
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 3478899999999999888876 48999999982 4677888988876 566789999962
Q ss_pred -----ccccCC-CH----------------HHHHHHHHHccCCCCEEEc
Q 027441 197 -----LSLMGI-NF----------------PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 -----~~l~~~-d~----------------~~~l~e~~rvLkpgG~lvi 223 (223)
.++++. +. ..++.++.++|+|||.|++
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvy 372 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVY 372 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 223322 21 3789999999999999974
No 225
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.02 E-value=3.7e-10 Score=94.64 Aligned_cols=76 Identities=11% Similarity=-0.087 Sum_probs=61.9
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC-------------------CCCcEEEccCCCCCCCCCceeEEEEccc
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-------------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~ 198 (223)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+..+. ++||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-
Confidence 45799999999999998777 5799999986 13556677776654 7899999873
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.++..++..+.++|+|||+|++
T Consensus 148 ---~dp~~~~~~~~~~L~pgG~lv~ 169 (262)
T 2cmg_A 148 ---EPDIHRIDGLKRMLKEDGVFIS 169 (262)
T ss_dssp ---CCCHHHHHHHHTTEEEEEEEEE
T ss_pred ---CChHHHHHHHHHhcCCCcEEEE
Confidence 3666799999999999999975
No 226
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.01 E-value=1.4e-10 Score=99.29 Aligned_cols=83 Identities=18% Similarity=0.084 Sum_probs=62.9
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------------CCCcEEEccCCC-CCCCCCceeEEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------------~~~~~~~~d~~~-lp~~~~sfD~Vi~ 195 (223)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+.. ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 56899999999999999887 4799999986 245677788754 3445688999998
Q ss_pred cccccCC-----CHHHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGI-----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~-----d~~~~l~e~~rvLkpgG~lvi 223 (223)
....++. ....++.++.++|+|||+|++
T Consensus 175 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 207 (304)
T 2o07_A 175 DSSDPMGPAESLFKESYYQLMKTALKEDGVLCC 207 (304)
T ss_dssp ECC-----------CHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEE
Confidence 6554322 224789999999999999985
No 227
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.00 E-value=1.7e-10 Score=97.70 Aligned_cols=83 Identities=17% Similarity=0.134 Sum_probs=63.9
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------------CCCcEEEccCCCC-CCCCCceeEEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSNT-PLNSSSVDVAVF 195 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------------~~~~~~~~d~~~l-p~~~~sfD~Vi~ 195 (223)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+... +..+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 56899999999999999886 4799999986 2356777777542 223678999998
Q ss_pred cccccCCC---H--HHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGIN---F--PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~d---~--~~~l~e~~rvLkpgG~lvi 223 (223)
....++.. . ..++..+.++|+|||+|++
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~ 190 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVA 190 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 65433221 1 6999999999999999985
No 228
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.98 E-value=6.1e-10 Score=97.69 Aligned_cols=79 Identities=13% Similarity=0.094 Sum_probs=65.4
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------CCCcEEEccCCC-CCC-CCCceeEEEEccc
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSN-TPL-NSSSVDVAVFCLS 198 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------~~~~~~~~d~~~-lp~-~~~sfD~Vi~~~~ 198 (223)
++.+|||+| |+|.++..++ .+|+|+|+++ .++.++.+|+.. +|. .+++||+|++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 568999999 9999988776 3799999996 268899999988 664 3578999999876
Q ss_pred ccCCCHHHHHHHHHHccCCCCE
Q 027441 199 LMGINFPNYLQEAQRVLKPRGE 220 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~ 220 (223)
+++.....++.++.++|+|||.
T Consensus 251 ~~~~~~~~~l~~~~~~LkpgG~ 272 (373)
T 2qm3_A 251 ETLEAIRAFVGRGIATLKGPRC 272 (373)
T ss_dssp SSHHHHHHHHHHHHHTBCSTTC
T ss_pred CchHHHHHHHHHHHHHcccCCe
Confidence 5543457899999999999993
No 229
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.98 E-value=1.8e-10 Score=98.97 Aligned_cols=83 Identities=18% Similarity=0.118 Sum_probs=60.4
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------------CCCcEEEccCCC-CCCCCCceeEEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------------~~~~~~~~d~~~-lp~~~~sfD~Vi~ 195 (223)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+.. ++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 56899999999999999886 4799999986 134566777654 2334678999998
Q ss_pred cccccCC-C---H-HHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGI-N---F-PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~-d---~-~~~l~e~~rvLkpgG~lvi 223 (223)
...-+.. + . ..++.++.++|+|||+|++
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~ 220 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALKEDGILSS 220 (314)
T ss_dssp CCC-------------HHHHHHHHEEEEEEEEE
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEE
Confidence 6542211 1 1 6899999999999999985
No 230
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.98 E-value=2.2e-10 Score=98.69 Aligned_cols=83 Identities=17% Similarity=0.123 Sum_probs=63.2
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC-------------------CCCcEEEccCCC-CCCCCCceeEEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------------------~~~~~~~~d~~~-lp~~~~sfD~Vi~ 195 (223)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+.. ++..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 56899999999999999887 3699999986 135677777654 2333578999998
Q ss_pred cccccCC---C--HHHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGI---N--FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~---d--~~~~l~e~~rvLkpgG~lvi 223 (223)
...-.+. . ...++.++.++|+|||+|++
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 228 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVA 228 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEE
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 6532211 1 16899999999999999975
No 231
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.98 E-value=8.1e-10 Score=100.12 Aligned_cols=83 Identities=8% Similarity=0.088 Sum_probs=64.5
Q ss_pred CCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CCCcEEEccCCCCCC-CCCceeEEEEc--
Q 027441 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPL-NSSSVDVAVFC-- 196 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~~~~~~~d~~~lp~-~~~sfD~Vi~~-- 196 (223)
++.+|||+|||+|..+..++ ..|+|+|+++ .++.++.+|+..++. .+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 67899999999999888776 4799999997 357788889888764 45789999972
Q ss_pred ----ccccCC-C----------------HHHHHHHHHHccCCCCEEEc
Q 027441 197 ----LSLMGI-N----------------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ----~~l~~~-d----------------~~~~l~e~~rvLkpgG~lvi 223 (223)
.++.+. + ...+|.++.++|||||+|++
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvy 244 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVY 244 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 122211 1 13789999999999999974
No 232
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.97 E-value=1.7e-09 Score=86.30 Aligned_cols=77 Identities=19% Similarity=0.205 Sum_probs=62.6
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEEEEcccccCC
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI 202 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~ 202 (223)
++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+..+| .+||+|++...+++.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccc
Confidence 57899999999999998886 3699999996 15788899998875 489999999888765
Q ss_pred ---CHHHHHHHHHHccCCCCEEE
Q 027441 203 ---NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 203 ---d~~~~l~e~~rvLkpgG~lv 222 (223)
....++.++.++| ||.++
T Consensus 126 ~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp STTTTHHHHHHHHHHC--SEEEE
T ss_pred cCCchHHHHHHHHHhc--CcEEE
Confidence 3357889999998 55543
No 233
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.95 E-value=8.8e-10 Score=96.73 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=68.6
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc---C--ceEEEecCC----------------CCCcEEEccCCCCCCCC
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---N--KVFSFDLVS----------------NDPSVIACDMSNTPLNS 187 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~--~v~gvDis~----------------~~~~~~~~d~~~lp~~~ 187 (223)
...++... ..++.+|||+|||+|.++..++ . +|+|+|+++ .++.+..+|+..+++++
T Consensus 207 a~~l~~~~--~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~ 284 (373)
T 3tm4_A 207 ANAMIELA--ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYV 284 (373)
T ss_dssp HHHHHHHH--TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTC
T ss_pred HHHHHHhh--cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCccc
Confidence 34444444 3477899999999999988886 3 899999997 26789999999999888
Q ss_pred CceeEEEEcccccCC-----C----HHHHHHHHHHccCCCCEE
Q 027441 188 SSVDVAVFCLSLMGI-----N----FPNYLQEAQRVLKPRGEE 221 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~-----d----~~~~l~e~~rvLkpgG~l 221 (223)
++||+|++...+... . ...++.++.++| +|+.+
T Consensus 285 ~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~ 326 (373)
T 3tm4_A 285 DSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGV 326 (373)
T ss_dssp SCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEE
T ss_pred CCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEE
Confidence 999999997654421 1 357889999999 44433
No 234
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.95 E-value=1.7e-09 Score=100.68 Aligned_cols=116 Identities=18% Similarity=0.271 Sum_probs=86.3
Q ss_pred CchHHHHHhhcChHHHHHHHHhHHhhhccCCCchHHHHHHHHhc---cCCCCeEEEECCcchHHHHHhc----C-----c
Q 027441 95 TGKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIVKWLKD---HSPSLVIADFGCGDARLAKSVK----N-----K 162 (223)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~l~~---~~~~~~ILDiGcG~G~~a~~la----~-----~ 162 (223)
-+...++.|.+++-.|+.|........ .+.+.. .....+|||||||+|.++.... . +
T Consensus 319 L~s~tYevFEkD~vKy~~Ye~AI~~Al-----------~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vk 387 (637)
T 4gqb_A 319 LESQTYEVFEKDPIKYSQYQQAIYKCL-----------LDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIK 387 (637)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHHH-----------HHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEE
T ss_pred hhhhhhhhhcCChhhHHHHHHHHHHHH-----------HHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcE
Confidence 356677999999999998876554333 222211 1234689999999999844332 1 6
Q ss_pred eEEEecCC---------------CCCcEEEccCCCCCCCCCceeEEEEcccccCC---CHHHHHHHHHHccCCCCEEE
Q 027441 163 VFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI---NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 163 v~gvDis~---------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~---d~~~~l~e~~rvLkpgG~lv 222 (223)
|+||+-++ ..+.++.+|++++.++ +.+|+||+-+.-..+ ..+.+|....|.|||||+++
T Consensus 388 VyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 388 LYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 89999987 4688999999998776 679999987765544 45588999999999999975
No 235
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.94 E-value=1.2e-09 Score=93.16 Aligned_cols=89 Identities=24% Similarity=0.301 Sum_probs=63.2
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcEEEccCCCCCCCCCce
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSV 190 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp~~~~sf 190 (223)
.+.+++.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..++++ +|
T Consensus 31 ~~~i~~~~~~~-~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~ 107 (299)
T 2h1r_A 31 LDKIIYAAKIK-SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KF 107 (299)
T ss_dssp HHHHHHHHCCC-TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CC
T ss_pred HHHHHHhcCCC-CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cC
Confidence 45566655443 67899999999999999998 4799999996 3577888999888764 79
Q ss_pred eEEEEcccccCCCH--HHHH---------------HHHHHccCCCCE
Q 027441 191 DVAVFCLSLMGINF--PNYL---------------QEAQRVLKPRGE 220 (223)
Q Consensus 191 D~Vi~~~~l~~~d~--~~~l---------------~e~~rvLkpgG~ 220 (223)
|+|++....++..+ ..++ +.+.|+++|+|.
T Consensus 108 D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~ 154 (299)
T 2h1r_A 108 DVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGD 154 (299)
T ss_dssp SEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTS
T ss_pred CEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCC
Confidence 99999876665422 2333 447788988773
No 236
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.93 E-value=2.1e-09 Score=94.99 Aligned_cols=97 Identities=14% Similarity=0.195 Sum_probs=70.1
Q ss_pred CCchHHHHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCCC------CCcEEEccCCCCCCCCCceeE
Q 027441 125 PELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVSN------DPSVIACDMSNTPLNSSSVDV 192 (223)
Q Consensus 125 p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~~------~~~~~~~d~~~lp~~~~sfD~ 192 (223)
|....+.+.+.+... ++.+|||+|||+|.++..++ .+|+|+|+++. ++.++.+|+...+. ...||+
T Consensus 24 P~~l~~~~~~~~~~~-~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~~-~~~fD~ 101 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAP-RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEP-GEAFDL 101 (421)
T ss_dssp CHHHHHHHHHHCCCC-TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCTTEEEEESCGGGCCC-SSCEEE
T ss_pred CHHHHHHHHHhhccC-CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCCCCcEEeCChhhcCc-cCCCCE
Confidence 444455666665432 46799999999999888776 37999999983 45677888877653 468999
Q ss_pred EEEccccc----------CCC--------------------HHHHHHHHHHccCCCCEEEc
Q 027441 193 AVFCLSLM----------GIN--------------------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 193 Vi~~~~l~----------~~d--------------------~~~~l~e~~rvLkpgG~lvi 223 (223)
|++.--+. |++ ...++..+.++|+|||.+++
T Consensus 102 Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 102 ILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp EEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 99952221 121 12678999999999999875
No 237
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.93 E-value=4.5e-10 Score=99.05 Aligned_cols=84 Identities=10% Similarity=0.159 Sum_probs=64.2
Q ss_pred CCCCeEEEECCcchHHHHHhc----CceEEEecCC---------------C--CCcEEEccCCCC-CC---CCCceeEEE
Q 027441 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------N--DPSVIACDMSNT-PL---NSSSVDVAV 194 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~--~~~~~~~d~~~l-p~---~~~sfD~Vi 194 (223)
.++.+|||+|||+|.++..++ .+|+|+|+|+ . ++.++.+|+... +. ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 367899999999999998887 3799999998 2 677889998652 21 245899999
Q ss_pred Ecccc-----cCC-----CHHHHHHHHHHccCCCCEEEc
Q 027441 195 FCLSL-----MGI-----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 195 ~~~~l-----~~~-----d~~~~l~e~~rvLkpgG~lvi 223 (223)
+.-.. .++ +...++..+.++|+|||+|++
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~ 329 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIA 329 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 85332 122 345678888999999999975
No 238
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.93 E-value=4.2e-10 Score=106.37 Aligned_cols=88 Identities=10% Similarity=0.072 Sum_probs=68.3
Q ss_pred HhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC---------------C--CCcEEEccCCC-CCCCCCceeEE
Q 027441 136 LKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------N--DPSVIACDMSN-TPLNSSSVDVA 193 (223)
Q Consensus 136 l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~--~~~~~~~d~~~-lp~~~~sfD~V 193 (223)
+....++.+|||+|||+|.++..++ .+|+++|+|+ . ++.++.+|+.. ++...++||+|
T Consensus 534 l~~~~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~I 613 (703)
T 3v97_A 534 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLI 613 (703)
T ss_dssp HHHHCTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred HHHhcCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEE
Confidence 3333467899999999999998876 4699999996 1 47788899866 34446789999
Q ss_pred EEccc-----------ccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLS-----------LMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~-----------l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
++.-- +.+. +...++..+.++|+|||+|++
T Consensus 614 i~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~ 655 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 655 (703)
T ss_dssp EECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 98542 2222 566899999999999999985
No 239
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.92 E-value=2.2e-09 Score=89.99 Aligned_cols=84 Identities=14% Similarity=0.091 Sum_probs=62.3
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCC-------C------CCcEEEccCCCCCCCCCceeEEEEccccc-
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------N------DPSVIACDMSNTPLNSSSVDVAVFCLSLM- 200 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~-------~------~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~- 200 (223)
.++.+|||||||+|.|+.+++ ..|.|+|+.- . ++.++..++....+++..||+|+|..+.+
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apns 152 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESS 152 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccCc
Confidence 467899999999999999876 2466777762 1 23345556655677788999999999877
Q ss_pred ---CCCHH---HHHHHHHHccCCC-CEEEc
Q 027441 201 ---GINFP---NYLQEAQRVLKPR-GEEQI 223 (223)
Q Consensus 201 ---~~d~~---~~l~e~~rvLkpg-G~lvi 223 (223)
++|-. .+|..+.++|+|| |.|++
T Consensus 153 G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 153 SSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 22322 3568889999999 99985
No 240
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.91 E-value=7.1e-10 Score=93.66 Aligned_cols=82 Identities=12% Similarity=0.031 Sum_probs=61.9
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC-------------------------CCCcEEEccCCCC-CCCCCce
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------------------NDPSVIACDMSNT-PLNSSSV 190 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~-------------------------~~~~~~~~d~~~l-p~~~~sf 190 (223)
.+.+|||||||+|.++..++ .+|+++|+++ .++.++.+|+... +. +++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 56899999999999999887 4799999985 1245666665432 22 5789
Q ss_pred eEEEEcccccCC-----CHHHHHHHHHHccCCCCEEEc
Q 027441 191 DVAVFCLSLMGI-----NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 191 D~Vi~~~~l~~~-----d~~~~l~e~~rvLkpgG~lvi 223 (223)
|+|++....++. ....++.++.++|+|||+|++
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~ 191 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVT 191 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 999987654321 136889999999999999975
No 241
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.91 E-value=5.5e-10 Score=100.71 Aligned_cols=90 Identities=11% Similarity=0.067 Sum_probs=65.8
Q ss_pred HHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC--------------CCCcEEEccCCCCC-CCCCcee
Q 027441 133 VKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS--------------NDPSVIACDMSNTP-LNSSSVD 191 (223)
Q Consensus 133 ~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~--------------~~~~~~~~d~~~lp-~~~~sfD 191 (223)
...+. ..++.+|||+|||+|..+..++ ..|+|+|+++ ..+.++.+|+..++ +.+++||
T Consensus 94 a~~L~-~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD 172 (464)
T 3m6w_A 94 GVLLD-PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFH 172 (464)
T ss_dssp HHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEE
T ss_pred HHhcC-cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCC
Confidence 33443 3478999999999999888876 4799999997 12667778876665 2467899
Q ss_pred EEEE----c--ccccCC-CH----------------HHHHHHHHHccCCCCEEEc
Q 027441 192 VAVF----C--LSLMGI-NF----------------PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~----~--~~l~~~-d~----------------~~~l~e~~rvLkpgG~lvi 223 (223)
+|++ + .++.+. +. ..+|.++.++|+|||+|++
T Consensus 173 ~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvy 227 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVY 227 (464)
T ss_dssp EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 9995 2 122211 11 5799999999999999973
No 242
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.90 E-value=2.6e-10 Score=100.38 Aligned_cols=89 Identities=12% Similarity=0.104 Sum_probs=67.4
Q ss_pred HHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcEEEccCCCCCC----CCCcee
Q 027441 134 KWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPL----NSSSVD 191 (223)
Q Consensus 134 ~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp~----~~~sfD 191 (223)
..+... ++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+..+.. ...+||
T Consensus 203 ~~~~~~-~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 203 LYMERF-RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFD 281 (382)
T ss_dssp HHGGGC-CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred HHHHhc-CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCee
Confidence 344444 67899999999999998887 5899999997 247788888866421 257899
Q ss_pred EEEEcccccC---------C-CHHHHHHHHHHccCCCCEEEc
Q 027441 192 VAVFCLSLMG---------I-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~---------~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+|++.-.... . +...++.++.++|+|||+|++
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 323 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILAT 323 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 9998543211 1 345899999999999999875
No 243
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.89 E-value=1.9e-09 Score=90.04 Aligned_cols=81 Identities=14% Similarity=0.126 Sum_probs=65.9
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEEEEccccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~ 200 (223)
++..+|||||||+|.++..+. ..|+++|+++ ....+.+.|...-+ +...||+|++.-+++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHH
Confidence 356899999999999999886 4899999997 33456677776655 357799999999999
Q ss_pred CCCHH---HHHHHHHHccCCCCEEE
Q 027441 201 GINFP---NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 201 ~~d~~---~~l~e~~rvLkpgG~lv 222 (223)
|++.. ..+ .+...|+|+|+++
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvV 233 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVV 233 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEE
Confidence 99443 455 8999999999987
No 244
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.89 E-value=2.9e-09 Score=92.18 Aligned_cols=82 Identities=22% Similarity=0.230 Sum_probs=64.0
Q ss_pred CCCeEEEECCcchHHHHHhc----------CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEEEEc
Q 027441 141 PSLVIADFGCGDARLAKSVK----------NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----------~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~Vi~~ 196 (223)
++.+|||+|||+|.++..++ ..|+|+|+++ .++.+..+|.... .....||+|++.
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEEC
Confidence 56899999999999877664 3689999997 2467888887653 345789999999
Q ss_pred ccccCC-C-----------------H-HHHHHHHHHccCCCCEEEc
Q 027441 197 LSLMGI-N-----------------F-PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~l~~~-d-----------------~-~~~l~e~~rvLkpgG~lvi 223 (223)
-.+.++ . . ..++..+.+.|+|||.+++
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~ 254 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFF 254 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEE
Confidence 776543 1 1 2589999999999999875
No 245
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.88 E-value=2.7e-09 Score=90.13 Aligned_cols=79 Identities=15% Similarity=0.194 Sum_probs=63.8
Q ss_pred CCCCeEEEECCcchHHHHHhc----CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l 199 (223)
.++.+|||+|||+|.++..++ .+|+++|+++ ..+.++.+|+..++. .+.||.|++....
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p~ 202 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVV 202 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCS
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCCC
Confidence 478999999999999988776 4799999997 346788899988764 5789999876432
Q ss_pred cCCCHHHHHHHHHHccCCCCEEE
Q 027441 200 MGINFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvLkpgG~lv 222 (223)
....++..+.++|+|||+|.
T Consensus 203 ---~~~~~l~~a~~~lk~gG~ih 222 (278)
T 3k6r_A 203 ---RTHEFIPKALSIAKDGAIIH 222 (278)
T ss_dssp ---SGGGGHHHHHHHEEEEEEEE
T ss_pred ---cHHHHHHHHHHHcCCCCEEE
Confidence 22467888889999999985
No 246
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.87 E-value=1.5e-10 Score=95.82 Aligned_cols=80 Identities=16% Similarity=0.139 Sum_probs=57.7
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC-------------CCCcEEEccCCCCCCCC-CceeEEEEccccc---
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTPLNS-SSVDVAVFCLSLM--- 200 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~lp~~~-~sfD~Vi~~~~l~--- 200 (223)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++ ..| .|++...++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~vv~nlPy~~~~ 108 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-KIFGNIPYNIST 108 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-EEEEECCGGGHH
T ss_pred CCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-EEEEeCCcccCH
Confidence 67899999999999999887 5899999996 36788999999988874 456 344443222
Q ss_pred --------CC-CHHHHH----HHHHHccCCCCEE
Q 027441 201 --------GI-NFPNYL----QEAQRVLKPRGEE 221 (223)
Q Consensus 201 --------~~-d~~~~l----~e~~rvLkpgG~l 221 (223)
|. ....++ +.+.|+|+|+|.|
T Consensus 109 ~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l 142 (244)
T 1qam_A 109 DIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSL 142 (244)
T ss_dssp HHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHH
T ss_pred HHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcch
Confidence 21 111233 4488899998865
No 247
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.87 E-value=1.1e-09 Score=98.61 Aligned_cols=84 Identities=13% Similarity=0.115 Sum_probs=63.1
Q ss_pred cCCCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CCCcEEEccCCCCC-CCCCceeEEEEc
Q 027441 139 HSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTP-LNSSSVDVAVFC 196 (223)
Q Consensus 139 ~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~~~~~~~d~~~lp-~~~~sfD~Vi~~ 196 (223)
..++.+|||+|||+|..+..++ ..|+++|+++ .++.++.+|+..++ ..+++||+|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 3478999999999999887776 4799999997 35667777876654 235789999973
Q ss_pred cc------ccCCCH------------------HHHHHHHHHccCCCCEEEc
Q 027441 197 LS------LMGINF------------------PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~------l~~~d~------------------~~~l~e~~rvLkpgG~lvi 223 (223)
.- +.+ ++ ..+|.++.++|+|||.|+.
T Consensus 183 aPCSg~G~~rr-~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvY 232 (456)
T 3m4x_A 183 APCSGEGMFRK-DPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIY 232 (456)
T ss_dssp CCCCCGGGTTT-CHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCCCcccccc-CHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 21 111 11 1789999999999999973
No 248
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.86 E-value=3.4e-09 Score=91.75 Aligned_cols=77 Identities=14% Similarity=0.219 Sum_probs=63.3
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCC----------------CCCcEEEccCCCCCCCCCceeEEEEccccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~----------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~ 200 (223)
.++.+|||+|||+|.++.. + .+|+|+|+++ .++.++.+|+..+. .+||+|++.....
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPKF 269 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTTT
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcHh
Confidence 3678999999999999988 7 5799999996 35788899998776 7899999863321
Q ss_pred CCCHHHHHHHHHHccCCCCEEEc
Q 027441 201 GINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...++..+.++|+|||+|++
T Consensus 270 ---~~~~l~~~~~~L~~gG~l~~ 289 (336)
T 2yx1_A 270 ---AHKFIDKALDIVEEGGVIHY 289 (336)
T ss_dssp ---GGGGHHHHHHHEEEEEEEEE
T ss_pred ---HHHHHHHHHHHcCCCCEEEE
Confidence 23789999999999998874
No 249
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.86 E-value=1.1e-09 Score=96.78 Aligned_cols=84 Identities=14% Similarity=0.027 Sum_probs=65.3
Q ss_pred CCCCeEEEECCcchHHHHHhc----CceEEEecCC--------------C---CCcEEEccCCCCCC----CCCceeEEE
Q 027441 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS--------------N---DPSVIACDMSNTPL----NSSSVDVAV 194 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~--------------~---~~~~~~~d~~~lp~----~~~sfD~Vi 194 (223)
.++.+|||+|||+|.++..++ .+|+|+|+++ . ++.++.+|+..+.. ....||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 367899999999999998886 4799999996 1 45688888865421 146899999
Q ss_pred Ecccc---------cCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 195 FCLSL---------MGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 195 ~~~~l---------~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
+.-.. .+. +...++.++.++|+|||+|++
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 337 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLT 337 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 86422 222 566899999999999999975
No 250
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.85 E-value=2.6e-09 Score=99.75 Aligned_cols=116 Identities=19% Similarity=0.208 Sum_probs=84.7
Q ss_pred chHHHHHhhcChHHHHHHHHhHHhhhccCCCchHHHHHHHHhccCCCCeEEEECCcchHHHHHh------cC--------
Q 027441 96 GKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSV------KN-------- 161 (223)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~l------a~-------- 161 (223)
+...++.|..+.-.|+.|........ .+..........|||||||+|.++... +.
T Consensus 375 es~tYe~fekD~vRy~~Y~~AI~~al-----------~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~ 443 (745)
T 3ua3_A 375 DSGVYNTFEQDQIKYDVYGEAVVGAL-----------KDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQE 443 (745)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHH-----------HHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSC
T ss_pred chHHHHHHcCChhhHHHHHHHHHHHH-----------HHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCcccccccc
Confidence 55567888888888888775443322 111111113468999999999985321 13
Q ss_pred ----ceEEEecCC---------------CCCcEEEccCCCCCCC-----CCceeEEEEcccccCC---CHHHHHHHHHHc
Q 027441 162 ----KVFSFDLVS---------------NDPSVIACDMSNTPLN-----SSSVDVAVFCLSLMGI---NFPNYLQEAQRV 214 (223)
Q Consensus 162 ----~v~gvDis~---------------~~~~~~~~d~~~lp~~-----~~sfD~Vi~~~~l~~~---d~~~~l~e~~rv 214 (223)
+|+|||.++ ..+.++.+|++++.++ ...+|+||+-+.-... -.+.+|..+.|.
T Consensus 444 ~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~ 523 (745)
T 3ua3_A 444 SLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGF 523 (745)
T ss_dssp CCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGG
T ss_pred ccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHh
Confidence 899999986 4589999999988763 5789999998886554 345899999999
Q ss_pred cCCCCEEE
Q 027441 215 LKPRGEEQ 222 (223)
Q Consensus 215 LkpgG~lv 222 (223)
|+|||+++
T Consensus 524 Lkp~Gi~i 531 (745)
T 3ua3_A 524 LKPTTISI 531 (745)
T ss_dssp SCTTCEEE
T ss_pred CCCCcEEE
Confidence 99999876
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.83 E-value=4.4e-09 Score=89.63 Aligned_cols=74 Identities=22% Similarity=0.201 Sum_probs=60.6
Q ss_pred chHHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC-------------CCCcEEEccCCCCCCCCCce
Q 027441 127 LPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSV 190 (223)
Q Consensus 127 ~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~lp~~~~sf 190 (223)
..++.|++.+... ++.+|||||||+|.++..|+ .+|+|+|+++ .++.++.+|+..+++++..|
T Consensus 37 ~i~~~Iv~~l~~~-~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~f 115 (295)
T 3gru_A 37 NFVNKAVESANLT-KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDF 115 (295)
T ss_dssp HHHHHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCC
T ss_pred HHHHHHHHhcCCC-CcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCc
Confidence 3445666666544 67899999999999999887 5899999997 46789999999998888889
Q ss_pred eEEEEcccccC
Q 027441 191 DVAVFCLSLMG 201 (223)
Q Consensus 191 D~Vi~~~~l~~ 201 (223)
|+|+++..++.
T Consensus 116 D~Iv~NlPy~i 126 (295)
T 3gru_A 116 NKVVANLPYQI 126 (295)
T ss_dssp SEEEEECCGGG
T ss_pred cEEEEeCcccc
Confidence 99998866543
No 252
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.83 E-value=1.1e-09 Score=96.68 Aligned_cols=83 Identities=14% Similarity=0.105 Sum_probs=65.0
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC---------------C-CCcEEEccCCCCCC----CCCceeEEEEc
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------N-DPSVIACDMSNTPL----NSSSVDVAVFC 196 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~---------------~-~~~~~~~d~~~lp~----~~~sfD~Vi~~ 196 (223)
++.+|||+|||+|.++..++ .+|+|+|+++ . ++.++.+|+..+.. ...+||+|++.
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 67899999999999998887 3799999997 1 57788888866421 25789999985
Q ss_pred cccc---------CC-CHHHHHHHHHHccCCCCEEEc
Q 027441 197 LSLM---------GI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~l~---------~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
-... +. +...++.++.++|+|||+|++
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 333 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVT 333 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 4321 11 456899999999999998874
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.82 E-value=7.2e-09 Score=92.90 Aligned_cols=97 Identities=16% Similarity=0.236 Sum_probs=73.2
Q ss_pred CCchHHHHHHHHhccCCCCeEEEECCcchHHHHHhc------------------CceEEEecCC---------------C
Q 027441 125 PELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------------------NKVFSFDLVS---------------N 171 (223)
Q Consensus 125 p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------------------~~v~gvDis~---------------~ 171 (223)
|....+.+.+.+... ++.+|||.|||+|.++..++ ..++|+|+++ .
T Consensus 156 P~~v~~~mv~~l~~~-~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 156 PRPLIQAMVDCINPQ-MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp CHHHHHHHHHHHCCC-TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHhCCC-CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 555566666666543 56799999999999776543 4699999997 1
Q ss_pred --CCcEEEccCCCCCCCCCceeEEEEcccccCC---C---------------HHHHHHHHHHccCCCCEEEc
Q 027441 172 --DPSVIACDMSNTPLNSSSVDVAVFCLSLMGI---N---------------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 172 --~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~---d---------------~~~~l~e~~rvLkpgG~lvi 223 (223)
++.+..+|....+.. ..||+|++.-.+.+. + ...++..+.++|+|||.++|
T Consensus 235 ~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 235 TDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp SSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 567888998776644 489999998766643 1 13789999999999999864
No 254
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.80 E-value=1.1e-08 Score=91.52 Aligned_cols=89 Identities=16% Similarity=0.269 Sum_probs=64.4
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcEEEccCCC----CCCCCC
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSN----TPLNSS 188 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~----lp~~~~ 188 (223)
.+++++.. .++.+|||+|||+|.++..++ .+|+|+|+++ .++.|+.+|+.. +|+.++
T Consensus 277 ~~~~~l~~-~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~ 355 (433)
T 1uwv_A 277 RALEWLDV-QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKN 355 (433)
T ss_dssp HHHHHHTC-CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTT
T ss_pred HHHHhhcC-CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcC
Confidence 34444433 256899999999999999988 5799999996 367899999977 445677
Q ss_pred ceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+||+|++.--.... ..++..+. .++|++++++
T Consensus 356 ~fD~Vv~dPPr~g~--~~~~~~l~-~~~p~~ivyv 387 (433)
T 1uwv_A 356 GFDKVLLDPARAGA--AGVMQQII-KLEPIRIVYV 387 (433)
T ss_dssp CCSEEEECCCTTCC--HHHHHHHH-HHCCSEEEEE
T ss_pred CCCEEEECCCCccH--HHHHHHHH-hcCCCeEEEE
Confidence 89999986443333 24555444 3688888764
No 255
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.80 E-value=4.6e-09 Score=92.92 Aligned_cols=83 Identities=12% Similarity=0.007 Sum_probs=61.6
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC--------------CCCcEEEccCCCC-CCCCCceeEEEEcccccC-
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNT-PLNSSSVDVAVFCLSLMG- 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------------~~~~~~~~d~~~l-p~~~~sfD~Vi~~~~l~~- 201 (223)
++.+|||+|||+|.++..++ ..|+++|+|+ ....+..+|+..+ +...+.||+|++.-....
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 47899999999999999887 4599999997 1234667777553 221334999998644311
Q ss_pred --------C-CHHHHHHHHHHccCCCCEEEc
Q 027441 202 --------I-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 --------~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
. +...++..+.++|+|||+|++
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~ 324 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWL 324 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1 345899999999999999973
No 256
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.75 E-value=3.1e-08 Score=88.40 Aligned_cols=80 Identities=15% Similarity=0.135 Sum_probs=60.7
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCC--------------CCCcEEEccCCCCCCCCCceeEEEEcccccCC
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI 202 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~ 202 (223)
.++.+|||+|||+|.++..++ .+|+|+|+++ ..+.|+.+|+..++.. .||+|++.-.....
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRAGL 366 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTTCS
T ss_pred CCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCccch
Confidence 367899999999999999887 5799999997 1267889999887532 89999986543222
Q ss_pred CHHHHHHHHHHccCCCCEEEc
Q 027441 203 NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 203 d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ ..++..+ +.|+|||++++
T Consensus 367 ~-~~~~~~l-~~l~p~givyv 385 (425)
T 2jjq_A 367 H-PRLVKRL-NREKPGVIVYV 385 (425)
T ss_dssp C-HHHHHHH-HHHCCSEEEEE
T ss_pred H-HHHHHHH-HhcCCCcEEEE
Confidence 2 2455555 45999999985
No 257
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.71 E-value=2.9e-08 Score=87.12 Aligned_cols=82 Identities=20% Similarity=0.271 Sum_probs=58.1
Q ss_pred CCeEEEECCcchHHHHHhc--------------------CceEEEecCCCC---------------------------Cc
Q 027441 142 SLVIADFGCGDARLAKSVK--------------------NKVFSFDLVSND---------------------------PS 174 (223)
Q Consensus 142 ~~~ILDiGcG~G~~a~~la--------------------~~v~gvDis~~~---------------------------~~ 174 (223)
..+|+|+|||+|..+..+. -+|+.-|+...+ ..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4789999999999877663 135555654411 12
Q ss_pred EEEcc---CCCCCCCCCceeEEEEcccccCC-C--------------------------------------HHHHHHHHH
Q 027441 175 VIACD---MSNTPLNSSSVDVAVFCLSLMGI-N--------------------------------------FPNYLQEAQ 212 (223)
Q Consensus 175 ~~~~d---~~~lp~~~~sfD~Vi~~~~l~~~-d--------------------------------------~~~~l~e~~ 212 (223)
|+.+. .-.-.|++++||+|+++.+|||+ + +..+|...+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 22234789999999999999998 2 224688889
Q ss_pred HccCCCCEEEc
Q 027441 213 RVLKPRGEEQI 223 (223)
Q Consensus 213 rvLkpgG~lvi 223 (223)
+.|+|||.|++
T Consensus 213 ~eL~pGG~mvl 223 (374)
T 3b5i_A 213 AEVKRGGAMFL 223 (374)
T ss_dssp HHEEEEEEEEE
T ss_pred HHhCCCCEEEE
Confidence 99999999985
No 258
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.70 E-value=2.7e-08 Score=83.44 Aligned_cols=83 Identities=18% Similarity=0.183 Sum_probs=59.9
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCCC-------------CCcEEEccCCCCCCCCCceeEEEEcccccC
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN-------------DPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~~-------------~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~ 201 (223)
.+..+|||||||+|.|+.+++ ..|+|+|+... ++..+..++....++...+|+|+|.++..
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmApn- 167 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGES- 167 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCCC-
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCccC-
Confidence 467899999999999999876 26889999741 12222323333345678899999999888
Q ss_pred C-----CHH---HHHHHHHHccCCC--CEEEc
Q 027441 202 I-----NFP---NYLQEAQRVLKPR--GEEQI 223 (223)
Q Consensus 202 ~-----d~~---~~l~e~~rvLkpg--G~lvi 223 (223)
. |-. .+|.-+.++|+|| |.|++
T Consensus 168 sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~ 199 (282)
T 3gcz_A 168 SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCI 199 (282)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 4 222 3567778999999 99975
No 259
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.59 E-value=2.6e-07 Score=78.01 Aligned_cols=92 Identities=11% Similarity=0.045 Sum_probs=63.4
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhcC-----ceEEEecCCC-------------CCcEEEccCCCCCCCCCcee
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVKN-----KVFSFDLVSN-------------DPSVIACDMSNTPLNSSSVD 191 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la~-----~v~gvDis~~-------------~~~~~~~d~~~lp~~~~sfD 191 (223)
..+.+. ....++.+||||||++|.|+.++.. .|.|+|+... ++.....++.-..+....||
T Consensus 71 ~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~D 149 (300)
T 3eld_A 71 RWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSD 149 (300)
T ss_dssp HHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCS
T ss_pred HHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcC
Confidence 344444 4445788999999999999999984 5788998741 11112222222344567899
Q ss_pred EEEEcccccCC-CH----H---HHHHHHHHccCCC-CEEEc
Q 027441 192 VAVFCLSLMGI-NF----P---NYLQEAQRVLKPR-GEEQI 223 (223)
Q Consensus 192 ~Vi~~~~l~~~-d~----~---~~l~e~~rvLkpg-G~lvi 223 (223)
+|+|..+.. . .+ . .+|.-+.++|+|| |.|++
T Consensus 150 lVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~ 189 (300)
T 3eld_A 150 TLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCV 189 (300)
T ss_dssp EEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEE
T ss_pred EEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 999998877 4 22 1 4577778999999 99975
No 260
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.58 E-value=7.3e-08 Score=80.36 Aligned_cols=69 Identities=13% Similarity=0.173 Sum_probs=53.6
Q ss_pred hHHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC-------------CCCcEEEccCCCCCCCC----
Q 027441 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTPLNS---- 187 (223)
Q Consensus 128 ~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~lp~~~---- 187 (223)
..+.|++.+... ++.+|||||||+|.++..|+ .+|+|+|+++ .++.++.+|+..+++++
T Consensus 17 i~~~iv~~~~~~-~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~ 95 (255)
T 3tqs_A 17 VLQKIVSAIHPQ-KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTD 95 (255)
T ss_dssp HHHHHHHHHCCC-TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCS
T ss_pred HHHHHHHhcCCC-CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccC
Confidence 345666666544 67899999999999999998 5899999996 46789999999987653
Q ss_pred CceeEEEEccc
Q 027441 188 SSVDVAVFCLS 198 (223)
Q Consensus 188 ~sfD~Vi~~~~ 198 (223)
..|| |+++.-
T Consensus 96 ~~~~-vv~NlP 105 (255)
T 3tqs_A 96 KPLR-VVGNLP 105 (255)
T ss_dssp SCEE-EEEECC
T ss_pred CCeE-EEecCC
Confidence 5688 555443
No 261
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.55 E-value=7.3e-08 Score=81.06 Aligned_cols=72 Identities=14% Similarity=0.071 Sum_probs=56.3
Q ss_pred hHHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC------------CCCcEEEccCCCCCCCCC-cee
Q 027441 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------NDPSVIACDMSNTPLNSS-SVD 191 (223)
Q Consensus 128 ~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~------------~~~~~~~~d~~~lp~~~~-sfD 191 (223)
..+.|++.+... ++ +|||||||+|.++..|+ .+|+|+|+++ .++.++.+|+..+++++. .+|
T Consensus 35 i~~~Iv~~~~~~-~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~ 112 (271)
T 3fut_A 35 HLRRIVEAARPF-TG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGS 112 (271)
T ss_dssp HHHHHHHHHCCC-CS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTE
T ss_pred HHHHHHHhcCCC-CC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCcc
Confidence 445666666544 56 99999999999999887 5899999997 357889999988887643 688
Q ss_pred EEEEcccccC
Q 027441 192 VAVFCLSLMG 201 (223)
Q Consensus 192 ~Vi~~~~l~~ 201 (223)
.|+++.-.+-
T Consensus 113 ~iv~NlPy~i 122 (271)
T 3fut_A 113 LLVANLPYHI 122 (271)
T ss_dssp EEEEEECSSC
T ss_pred EEEecCcccc
Confidence 8888765543
No 262
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.49 E-value=8.3e-08 Score=84.42 Aligned_cols=82 Identities=20% Similarity=0.321 Sum_probs=56.9
Q ss_pred CCeEEEECCcchHHHHHhcC----------------------ceEEEecCC------------------------CCCcE
Q 027441 142 SLVIADFGCGDARLAKSVKN----------------------KVFSFDLVS------------------------NDPSV 175 (223)
Q Consensus 142 ~~~ILDiGcG~G~~a~~la~----------------------~v~gvDis~------------------------~~~~~ 175 (223)
..+|+|+|||+|..+..+.. +|+.-|+.. ....|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 57899999999997775541 234455542 01234
Q ss_pred EEccCCC---CCCCCCceeEEEEcccccCC-CHH---------------------------------------HHHHHHH
Q 027441 176 IACDMSN---TPLNSSSVDVAVFCLSLMGI-NFP---------------------------------------NYLQEAQ 212 (223)
Q Consensus 176 ~~~d~~~---lp~~~~sfD~Vi~~~~l~~~-d~~---------------------------------------~~l~e~~ 212 (223)
+.+.... -.|++++||+|+++.+|||+ +.+ .+|....
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443322 45789999999999999998 322 1256668
Q ss_pred HccCCCCEEEc
Q 027441 213 RVLKPRGEEQI 223 (223)
Q Consensus 213 rvLkpgG~lvi 223 (223)
+.|+|||.|++
T Consensus 213 ~eL~pGG~mvl 223 (384)
T 2efj_A 213 EELISRGRMLL 223 (384)
T ss_dssp HHEEEEEEEEE
T ss_pred HHhccCCeEEE
Confidence 99999999985
No 263
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.47 E-value=1.1e-07 Score=87.43 Aligned_cols=98 Identities=16% Similarity=0.251 Sum_probs=70.5
Q ss_pred CCchHHHHHHHHhccCCCCeEEEECCcchHHHHHhc-----------------------CceEEEecCC-----------
Q 027441 125 PELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----------------------NKVFSFDLVS----------- 170 (223)
Q Consensus 125 p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----------------------~~v~gvDis~----------- 170 (223)
|...+..+.+.+... ++.+|||.|||+|.++..+. ..++|+|+++
T Consensus 154 P~~iv~~mv~~l~p~-~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 154 PRPLIKTIIHLLKPQ-PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp CHHHHHHHHHHHCCC-TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhccC-CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 444555566665543 67899999999999766543 2689999997
Q ss_pred ----CC-----CcEEEccCCCCC-CCCCceeEEEEcccccCC-C--------------HHHHHHHHHHccCCCCEEEc
Q 027441 171 ----ND-----PSVIACDMSNTP-LNSSSVDVAVFCLSLMGI-N--------------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 171 ----~~-----~~~~~~d~~~lp-~~~~sfD~Vi~~~~l~~~-d--------------~~~~l~e~~rvLkpgG~lvi 223 (223)
.. +.+..+|....+ .....||+|++.--+... . ...++..+.+.|+|||+++|
T Consensus 233 l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~ 310 (541)
T 2ar0_A 233 LHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAV 310 (541)
T ss_dssp TTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred HhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEE
Confidence 22 567888875543 345789999997655432 1 23799999999999999874
No 264
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.46 E-value=7.7e-08 Score=84.14 Aligned_cols=77 Identities=8% Similarity=0.184 Sum_probs=56.4
Q ss_pred CCeEEEECCcchHHHHHhc---CceEEEecCC---------------CCCcEEEccCCCCC--CCC--------------
Q 027441 142 SLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP--LNS-------------- 187 (223)
Q Consensus 142 ~~~ILDiGcG~G~~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp--~~~-------------- 187 (223)
+.+|||+|||+|.++..++ .+|+|+|+++ .++.|+.+|+..+. +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 5789999999999999887 5799999997 35778888886531 111
Q ss_pred CceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
..||+|++.--.. .+..++.+.|+++|.+++
T Consensus 294 ~~fD~Vv~dPPr~-----g~~~~~~~~l~~~g~ivy 324 (369)
T 3bt7_A 294 YQCETIFVDPPRS-----GLDSETEKMVQAYPRILY 324 (369)
T ss_dssp CCEEEEEECCCTT-----CCCHHHHHHHTTSSEEEE
T ss_pred CCCCEEEECcCcc-----ccHHHHHHHHhCCCEEEE
Confidence 3799998543211 235567777888888763
No 265
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.46 E-value=4.8e-07 Score=78.97 Aligned_cols=75 Identities=12% Similarity=-0.014 Sum_probs=60.6
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCC--------CCCcEEEccCCCCCCCCCceeEEEEcccccCCCHHHHH
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYL 208 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~--------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l 208 (223)
.++.+||||||++|.|+..+. ..|+|||+.+ +++.++.+|+..+..+...||+|+|-++.. +...+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~---p~~~~ 286 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEK---PAKVA 286 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSC---HHHHH
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCC---hHHhH
Confidence 478999999999999999988 6899999987 567889999988877778999999998853 45555
Q ss_pred HHHHHccCC
Q 027441 209 QEAQRVLKP 217 (223)
Q Consensus 209 ~e~~rvLkp 217 (223)
.-+.+.|..
T Consensus 287 ~l~~~wl~~ 295 (375)
T 4auk_A 287 ALMAQWLVN 295 (375)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 555554444
No 266
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.44 E-value=9.4e-08 Score=83.33 Aligned_cols=83 Identities=16% Similarity=0.088 Sum_probs=59.7
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC----------C-------------CCcEEEccCCCCCC----CCCc
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------N-------------DPSVIACDMSNTPL----NSSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~----------~-------------~~~~~~~d~~~lp~----~~~s 189 (223)
.+.+||+||||+|.++..++ .+|+++|+++ . ++.++.+|+..+.- ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 56899999999999998775 4799999996 1 35666777654321 3578
Q ss_pred eeEEEEcccc-c------CCCHHHHHHHH----HHccCCCCEEEc
Q 027441 190 VDVAVFCLSL-M------GINFPNYLQEA----QRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l-~------~~d~~~~l~e~----~rvLkpgG~lvi 223 (223)
||+|++...- . ++--..++..+ .++|+|||+|++
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~ 312 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 312 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 9999987543 1 11224666666 899999999974
No 267
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.42 E-value=4.7e-07 Score=74.98 Aligned_cols=82 Identities=17% Similarity=0.096 Sum_probs=57.7
Q ss_pred cCCCCeEEEECCcchHHHHHhcCc--e-------EEEe--cCCC-----CCcEEE---c-cCCCCCCCCCceeEEEEccc
Q 027441 139 HSPSLVIADFGCGDARLAKSVKNK--V-------FSFD--LVSN-----DPSVIA---C-DMSNTPLNSSSVDVAVFCLS 198 (223)
Q Consensus 139 ~~~~~~ILDiGcG~G~~a~~la~~--v-------~gvD--is~~-----~~~~~~---~-d~~~lp~~~~sfD~Vi~~~~ 198 (223)
..++.+||||||++|.|+.+++.. | +|+| +.|. .+.++. + |+..++ ...+|+|+|-++
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLSDMA 148 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLCDIG 148 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEECCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCC--CCCCCEEEeCCC
Confidence 357899999999999999998744 3 4556 3332 224444 5 887643 567999999987
Q ss_pred ccCC-----CHH---HHHHHHHHccCCCC-EEEc
Q 027441 199 LMGI-----NFP---NYLQEAQRVLKPRG-EEQI 223 (223)
Q Consensus 199 l~~~-----d~~---~~l~e~~rvLkpgG-~lvi 223 (223)
-. . |-. .+|.-+.++|+||| .|++
T Consensus 149 Pn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 149 ES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp CC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 65 3 222 35666779999999 7764
No 268
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.41 E-value=8.3e-07 Score=75.95 Aligned_cols=83 Identities=13% Similarity=0.085 Sum_probs=58.7
Q ss_pred cCCCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CCCcEEEccCCCCCCCC---CceeEEE
Q 027441 139 HSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPLNS---SSVDVAV 194 (223)
Q Consensus 139 ~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~~~~~~~d~~~lp~~~---~sfD~Vi 194 (223)
..++.+|||+|||+|..+..++ ..|+++|+++ .++.++.+|+..++... ..||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 3478899999999999888776 4799999997 35778889987765432 5799999
Q ss_pred Ec------ccccC-CC-----------H-------HHHHHHHHHccCCCCEEE
Q 027441 195 FC------LSLMG-IN-----------F-------PNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 195 ~~------~~l~~-~d-----------~-------~~~l~e~~rvLkpgG~lv 222 (223)
+. .++.. .| . ..+|..+.++|+ ||.|+
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lv 231 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLV 231 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEE
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEE
Confidence 62 12211 11 1 146778888886 89886
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.41 E-value=3.8e-07 Score=75.64 Aligned_cols=59 Identities=24% Similarity=0.309 Sum_probs=46.6
Q ss_pred hHHHHHHHHhccCCCCeEEEECCcchHHHHHhc----CceEEEecCC-----------CCCcEEEccCCCCCCCC
Q 027441 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS-----------NDPSVIACDMSNTPLNS 187 (223)
Q Consensus 128 ~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la----~~v~gvDis~-----------~~~~~~~~d~~~lp~~~ 187 (223)
..+.|++.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++
T Consensus 19 i~~~iv~~~~~~-~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 19 VLKKIAEELNIE-EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHTTCC-TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHhcCCC-CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhH
Confidence 345566665544 67899999999999999987 4799999996 24678899999988764
No 270
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.39 E-value=5e-07 Score=79.79 Aligned_cols=83 Identities=12% Similarity=0.097 Sum_probs=61.3
Q ss_pred CCCCeEEEECCcchHHHHHhc---C----------------------------------------ceEEEecCC------
Q 027441 140 SPSLVIADFGCGDARLAKSVK---N----------------------------------------KVFSFDLVS------ 170 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~----------------------------------------~v~gvDis~------ 170 (223)
.++..|||.+||+|.++..++ . +|+|+|+++
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 367899999999999876654 2 399999997
Q ss_pred ----------CCCcEEEccCCCCCCCCCceeEEEEcccccC-C----CHHHHHHHHHHccCC--CCEEEc
Q 027441 171 ----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG-I----NFPNYLQEAQRVLKP--RGEEQI 223 (223)
Q Consensus 171 ----------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~-~----d~~~~l~e~~rvLkp--gG~lvi 223 (223)
..+.+..+|+..++.+ .+||+|++.--+.. + +...+..++.++|++ ||.++|
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred HHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEE
Confidence 2478999999988765 58999999855431 2 233556666666665 887764
No 271
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.35 E-value=2.4e-07 Score=80.84 Aligned_cols=83 Identities=20% Similarity=0.233 Sum_probs=60.0
Q ss_pred CCCeEEEECCcchHHHHHhc---------------------CceEEEecCC----------C------CCcEEEccC---
Q 027441 141 PSLVIADFGCGDARLAKSVK---------------------NKVFSFDLVS----------N------DPSVIACDM--- 180 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---------------------~~v~gvDis~----------~------~~~~~~~d~--- 180 (223)
...+|+|+||++|..+..+. -+|+..|+.. + +..|+.+..
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 34789999999998665443 1355667654 1 224444433
Q ss_pred CCCCCCCCceeEEEEcccccCC-C---------------------------------HHHHHHHHHHccCCCCEEEc
Q 027441 181 SNTPLNSSSVDVAVFCLSLMGI-N---------------------------------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 181 ~~lp~~~~sfD~Vi~~~~l~~~-d---------------------------------~~~~l~e~~rvLkpgG~lvi 223 (223)
-.-.|+++++|+|+++.+|||+ + +..+|....+.|+|||.|++
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 3356889999999999999997 2 12458889999999999985
No 272
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.34 E-value=3.4e-07 Score=80.68 Aligned_cols=83 Identities=10% Similarity=0.101 Sum_probs=62.6
Q ss_pred CCCCeEEEECCcchHHHHHhc-------------------------------------------CceEEEecCC------
Q 027441 140 SPSLVIADFGCGDARLAKSVK-------------------------------------------NKVFSFDLVS------ 170 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-------------------------------------------~~v~gvDis~------ 170 (223)
.++..|||+|||+|.++..++ ..|+|+|+++
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 367899999999999877664 1499999997
Q ss_pred ----------CCCcEEEccCCCCCCCCCceeEEEEcccccCC-----CHHHHHHHHHHccCC--CCEEEc
Q 027441 171 ----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-----NFPNYLQEAQRVLKP--RGEEQI 223 (223)
Q Consensus 171 ----------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-----d~~~~l~e~~rvLkp--gG~lvi 223 (223)
..+.+.++|+.+++.+ .+||+|++.--+..- +...+..++.++|++ ||.++|
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 342 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYL 342 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEE
T ss_pred HHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 2577899999888764 589999997665422 334667777777776 777664
No 273
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.30 E-value=1.3e-06 Score=76.85 Aligned_cols=83 Identities=13% Similarity=0.136 Sum_probs=62.5
Q ss_pred CCCCeEEEECCcchHHHHHhc---C----------------------------------------ceEEEecCC------
Q 027441 140 SPSLVIADFGCGDARLAKSVK---N----------------------------------------KVFSFDLVS------ 170 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~----------------------------------------~v~gvDis~------ 170 (223)
.++..|||.+||+|.++..++ . .|+|+|+++
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 367899999999999876654 2 399999997
Q ss_pred ----------CCCcEEEccCCCCCCCCCceeEEEEccccc-CC----CHHHHHHHHHHccCC--CCEEEc
Q 027441 171 ----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM-GI----NFPNYLQEAQRVLKP--RGEEQI 223 (223)
Q Consensus 171 ----------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~-~~----d~~~~l~e~~rvLkp--gG~lvi 223 (223)
..+.+..+|+..++.+ .+||+|++.--+. -+ +...+..++.+.|++ ||.++|
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 341 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFI 341 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 2478899999988765 4899999985543 12 344667777777776 887764
No 274
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.30 E-value=2.5e-06 Score=69.82 Aligned_cols=81 Identities=17% Similarity=0.183 Sum_probs=60.2
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCC--------------CCCcEEEc-cCCCCCCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------NDPSVIAC-DMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------------~~~~~~~~-d~~~lp~~~~sfD~Vi~~~~l 199 (223)
.++..||||||++|.|+.+++ .+|+|+|+-. ..+.|..+ |+..++ ...+|.|+|...=
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcDIge 154 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCDIGE 154 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEECCCC
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC--CccccEEEEecCC
Confidence 477899999999999999876 4799999986 23456666 765554 3669999998876
Q ss_pred cCCCHH-------HHHHHHHHccCCCCEEEc
Q 027441 200 MGINFP-------NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~-------~~l~e~~rvLkpgG~lvi 223 (223)
..-++. .+|+-+.+.|++ |-|+|
T Consensus 155 Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 155 SSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred CCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 433332 466667788888 66654
No 275
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.29 E-value=1e-06 Score=67.08 Aligned_cols=68 Identities=7% Similarity=0.202 Sum_probs=51.3
Q ss_pred HHHHHHhcc-CCCCeEEEECCcch-HHHHHhcC----ceEEEecCCCCCcEEEccCCCCCCCC-CceeEEEEccc
Q 027441 131 IIVKWLKDH-SPSLVIADFGCGDA-RLAKSVKN----KVFSFDLVSNDPSVIACDMSNTPLNS-SSVDVAVFCLS 198 (223)
Q Consensus 131 ~i~~~l~~~-~~~~~ILDiGcG~G-~~a~~la~----~v~gvDis~~~~~~~~~d~~~lp~~~-~sfD~Vi~~~~ 198 (223)
.|..++... .+..+|||||||.| ..+..|+. .|+++|+++..+.+++.|+.+..+.- ..||+|.+..-
T Consensus 24 ~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~~v~dDiF~P~~~~Y~~~DLIYsirP 98 (153)
T 2k4m_A 24 DLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGGIVRDDITSPRMEIYRGAALIYSIRP 98 (153)
T ss_dssp HHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTTEECCCSSSCCHHHHTTEEEEEEESC
T ss_pred HHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccceEEccCCCCcccccCCcCEEEEcCC
Confidence 444454332 34579999999999 59998873 69999999988889999998744321 47999986654
No 276
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.26 E-value=1e-07 Score=79.51 Aligned_cols=61 Identities=13% Similarity=0.059 Sum_probs=48.0
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC-----------------------CCCcEEEccCCCC-C-CCC--Cce
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS-----------------------NDPSVIACDMSNT-P-LNS--SSV 190 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-----------------------~~~~~~~~d~~~l-p-~~~--~sf 190 (223)
++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+..+ + +++ ++|
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 56899999999999999887 5899999998 2377888888763 3 444 689
Q ss_pred eEEEEcccccC
Q 027441 191 DVAVFCLSLMG 201 (223)
Q Consensus 191 D~Vi~~~~l~~ 201 (223)
|+|++.-.+++
T Consensus 163 D~V~~dP~~~~ 173 (258)
T 2r6z_A 163 DIVYLDPMYPE 173 (258)
T ss_dssp SEEEECCCC--
T ss_pred cEEEECCCCCC
Confidence 99999766554
No 277
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.23 E-value=3.6e-07 Score=80.71 Aligned_cols=80 Identities=11% Similarity=-0.017 Sum_probs=60.9
Q ss_pred CCCeEEEECCcchHHHHHhc------CceEEEecCC---------------CC--CcEEEccCCCCC--CCCCceeEEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------ND--PSVIACDMSNTP--LNSSSVDVAVF 195 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------~~--~~~~~~d~~~lp--~~~~sfD~Vi~ 195 (223)
++.+|||++||+|.++..++ .+|+++|+++ .+ +.++.+|+..+. .....||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 57899999999999888776 3689999997 23 677788874431 11457999997
Q ss_pred cccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.- +-....++..+.+.|+|||+|++
T Consensus 132 DP---~g~~~~~l~~a~~~Lk~gGll~~ 156 (392)
T 3axs_A 132 DP---FGTPVPFIESVALSMKRGGILSL 156 (392)
T ss_dssp CC---SSCCHHHHHHHHHHEEEEEEEEE
T ss_pred CC---CcCHHHHHHHHHHHhCCCCEEEE
Confidence 65 22335789999999999998874
No 278
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.22 E-value=9.3e-07 Score=74.59 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=46.8
Q ss_pred hHHHHHHHHhccCCCCeEEEECCcchHHHHHhc---Cc----eEEEecCC-----------CCCcEEEccCCCCCCCC
Q 027441 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NK----VFSFDLVS-----------NDPSVIACDMSNTPLNS 187 (223)
Q Consensus 128 ~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~----v~gvDis~-----------~~~~~~~~d~~~lp~~~ 187 (223)
..+.|++.+... ++.+|||||||+|.++..|+ .. |+|+|+++ .++.++.+|+..+++++
T Consensus 30 i~~~iv~~~~~~-~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 30 VIDAIVAAIRPE-RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHHHHHHCCC-TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred HHHHHHHhcCCC-CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 345666666544 67899999999999999887 45 99999997 35788999998887653
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.22 E-value=4.1e-07 Score=75.61 Aligned_cols=69 Identities=13% Similarity=0.083 Sum_probs=50.5
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc--Cc--eEEEecCC-------------CCCcEEEccCCCCCCCCC---
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK--NK--VFSFDLVS-------------NDPSVIACDMSNTPLNSS--- 188 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la--~~--v~gvDis~-------------~~~~~~~~d~~~lp~~~~--- 188 (223)
.+.|++.+... ++.+|||||||+|.++. +. .+ |+|+|+++ .++.++.+|+..+++++.
T Consensus 10 ~~~iv~~~~~~-~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~ 87 (252)
T 1qyr_A 10 IDSIVSAINPQ-KGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEK 87 (252)
T ss_dssp HHHHHHHHCCC-TTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHH
T ss_pred HHHHHHhcCCC-CcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcc
Confidence 35566666543 67899999999999999 75 56 99999996 256788999988876432
Q ss_pred --ceeEEEEcccc
Q 027441 189 --SVDVAVFCLSL 199 (223)
Q Consensus 189 --sfD~Vi~~~~l 199 (223)
..|.|+++...
T Consensus 88 ~~~~~~vvsNlPY 100 (252)
T 1qyr_A 88 MGQPLRVFGNLPY 100 (252)
T ss_dssp HTSCEEEEEECCT
T ss_pred cCCceEEEECCCC
Confidence 34667666543
No 280
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.20 E-value=3e-07 Score=80.81 Aligned_cols=80 Identities=14% Similarity=0.015 Sum_probs=59.1
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC------------C---------------C---CcEEEccCCCCCC
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS------------N---------------D---PSVIACDMSNTPL 185 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~------------~---------------~---~~~~~~d~~~lp~ 185 (223)
++.+|||+|||+|..+..++ .+|+++|+++ . . +.++.+|+..+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 57899999999999888776 3699999997 1 2 4466677644321
Q ss_pred -CCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 186 -NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 186 -~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
....||+|++.- ......++..+.+.|+|||+|++
T Consensus 127 ~~~~~fD~I~lDP---~~~~~~~l~~a~~~lk~gG~l~v 162 (378)
T 2dul_A 127 ERHRYFHFIDLDP---FGSPMEFLDTALRSAKRRGILGV 162 (378)
T ss_dssp HSTTCEEEEEECC---SSCCHHHHHHHHHHEEEEEEEEE
T ss_pred hccCCCCEEEeCC---CCCHHHHHHHHHHhcCCCCEEEE
Confidence 135799999532 12346899999999999998864
No 281
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.20 E-value=3.4e-06 Score=77.44 Aligned_cols=98 Identities=15% Similarity=0.058 Sum_probs=66.9
Q ss_pred CCCchHHHHHHHHhccCCCCeEEEECCcchHHHHHhc--------------------CceEEEecCC-------------
Q 027441 124 WPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK--------------------NKVFSFDLVS------------- 170 (223)
Q Consensus 124 ~p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la--------------------~~v~gvDis~------------- 170 (223)
-|...+..|.+.+... ..+|||.+||+|.+...+. ..++|+|+++
T Consensus 229 TP~~Vv~lmv~ll~p~--~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~ 306 (544)
T 3khk_A 229 TPKSIVTLIVEMLEPY--KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR 306 (544)
T ss_dssp CCHHHHHHHHHHHCCC--SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhcC--CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh
Confidence 4556666666666543 3499999999999766542 3689999997
Q ss_pred ---CCCcEEEccCCCCC-CCCCceeEEEEcccccC-------------------------C----C-HHHHHHHHHHccC
Q 027441 171 ---NDPSVIACDMSNTP-LNSSSVDVAVFCLSLMG-------------------------I----N-FPNYLQEAQRVLK 216 (223)
Q Consensus 171 ---~~~~~~~~d~~~lp-~~~~sfD~Vi~~~~l~~-------------------------~----d-~~~~l~e~~rvLk 216 (223)
.++.+..+|....+ +.+..||+|++.--+.. + + .-.++..+.+.|+
T Consensus 307 gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk 386 (544)
T 3khk_A 307 GIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLA 386 (544)
T ss_dssp TCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEE
T ss_pred CCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhc
Confidence 12223566754433 55688999998643331 1 0 1268999999999
Q ss_pred CCCEEEc
Q 027441 217 PRGEEQI 223 (223)
Q Consensus 217 pgG~lvi 223 (223)
|||.++|
T Consensus 387 ~gGr~ai 393 (544)
T 3khk_A 387 PTGSMAL 393 (544)
T ss_dssp EEEEEEE
T ss_pred cCceEEE
Confidence 9999764
No 282
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.19 E-value=8.7e-06 Score=68.66 Aligned_cols=81 Identities=15% Similarity=0.181 Sum_probs=60.1
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCCC-------------C-CcEEEc-cCCCCCCCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN-------------D-PSVIAC-DMSNTPLNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~~-------------~-~~~~~~-d~~~lp~~~~sfD~Vi~~~~l 199 (223)
.++..||||||++|.|+.+++ ..|+|+|+-.. + +.+..+ |+..++. ..+|+|+|...
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig- 169 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG- 169 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC-
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc-
Confidence 467899999999999999877 46999999874 2 234444 7666653 66999999888
Q ss_pred cCC-CHH-------HHHHHHHHccCCC-CEEEc
Q 027441 200 MGI-NFP-------NYLQEAQRVLKPR-GEEQI 223 (223)
Q Consensus 200 ~~~-d~~-------~~l~e~~rvLkpg-G~lvi 223 (223)
+-. ++. .+|+-+.+.|++| |-|+|
T Consensus 170 eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 170 ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 433 332 4667778889998 88765
No 283
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.19 E-value=6.7e-07 Score=76.26 Aligned_cols=68 Identities=19% Similarity=0.330 Sum_probs=52.6
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC--------------CCCcEEEccCCCCC--CC-
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------NDPSVIACDMSNTP--LN- 186 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------------~~~~~~~~d~~~lp--~~- 186 (223)
++.+++.+... ++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+..++ +.
T Consensus 15 l~e~l~~L~~~-~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 15 VREVIEFLKPE-DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHHHCCC-TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcCCC-CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh
Confidence 45666777654 67899999999999988876 4799999997 35778899988765 21
Q ss_pred --CCceeEEEEcc
Q 027441 187 --SSSVDVAVFCL 197 (223)
Q Consensus 187 --~~sfD~Vi~~~ 197 (223)
..+||.|++..
T Consensus 94 ~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 94 LGIEKVDGILMDL 106 (301)
T ss_dssp TTCSCEEEEEEEC
T ss_pred cCCCCCCEEEEcC
Confidence 25799999754
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.16 E-value=5.4e-06 Score=70.31 Aligned_cols=84 Identities=15% Similarity=0.165 Sum_probs=64.4
Q ss_pred CCCCeEEEECCcchHHHHHhc-----CceEEEecCC--------------------CCCcEEEccCCCC-CCCCCceeEE
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------------NDPSVIACDMSNT-PLNSSSVDVA 193 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------------------~~~~~~~~d~~~l-p~~~~sfD~V 193 (223)
+...+||=||.|.|..+..+. .+|+.+||.+ +++.++.+|...+ .-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 356899999999999998876 4688999986 4677888888653 3446789999
Q ss_pred EEccccc-----CCCHHHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLM-----GINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~-----~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+.-..=- ++--..++..+.++|+|||+|+.
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEE
Confidence 9664311 11224899999999999999973
No 285
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.14 E-value=5.1e-07 Score=75.36 Aligned_cols=86 Identities=12% Similarity=0.003 Sum_probs=56.4
Q ss_pred HHHHHHHhccCCC--CeEEEECCcchHHHHHhc---CceEEEecCCC------------------------CCcEEEccC
Q 027441 130 NIIVKWLKDHSPS--LVIADFGCGDARLAKSVK---NKVFSFDLVSN------------------------DPSVIACDM 180 (223)
Q Consensus 130 ~~i~~~l~~~~~~--~~ILDiGcG~G~~a~~la---~~v~gvDis~~------------------------~~~~~~~d~ 180 (223)
+.+.+.+... ++ .+|||+|||+|..+..++ .+|+++|+++. ++.++.+|+
T Consensus 76 e~l~~al~l~-~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIK-GDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCB-TTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhccc-CCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 3455555433 45 799999999999999887 58999999971 356778887
Q ss_pred CC-CCCCCCceeEEEEcccccCCCHHHHHHHHHHccC
Q 027441 181 SN-TPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLK 216 (223)
Q Consensus 181 ~~-lp~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLk 216 (223)
.. ++.....||+|++.-.+.+-....++.+..++|+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~~~saavkk~~~~lr 191 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQ 191 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCCCC-----HHHHHHH
T ss_pred HHHHHhCcccCCEEEEcCCCCCcccchHHHHHHHHHH
Confidence 55 3322246999999877765432334444444443
No 286
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.09 E-value=8.4e-06 Score=74.79 Aligned_cols=100 Identities=15% Similarity=0.142 Sum_probs=70.6
Q ss_pred CCCchHHHHHHHHhc---cCCCCeEEEECCcchHHHHHhc--------CceEEEecCC------------C-----CCcE
Q 027441 124 WPELPVNIIVKWLKD---HSPSLVIADFGCGDARLAKSVK--------NKVFSFDLVS------------N-----DPSV 175 (223)
Q Consensus 124 ~p~~~~~~i~~~l~~---~~~~~~ILDiGcG~G~~a~~la--------~~v~gvDis~------------~-----~~~~ 175 (223)
-|...++.|.+.+.. ..++.+|||.+||+|.+...+. ..++|+|+++ . ++.+
T Consensus 201 TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I 280 (542)
T 3lkd_A 201 TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFL 280 (542)
T ss_dssp CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccce
Confidence 455667777777663 2256899999999999766553 3689999997 1 2357
Q ss_pred EEccCCCC--C-CCCCceeEEEEccccc--C-----------------C----C-HHHHHHHHHHccC-CCCEEEc
Q 027441 176 IACDMSNT--P-LNSSSVDVAVFCLSLM--G-----------------I----N-FPNYLQEAQRVLK-PRGEEQI 223 (223)
Q Consensus 176 ~~~d~~~l--p-~~~~sfD~Vi~~~~l~--~-----------------~----d-~~~~l~e~~rvLk-pgG~lvi 223 (223)
..+|.... | +....||+|++.--+. + + + .-.++..+.+.|+ |||++.|
T Consensus 281 ~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~ 356 (542)
T 3lkd_A 281 HNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAI 356 (542)
T ss_dssp EESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEE
T ss_pred EecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEE
Confidence 78887654 4 4567899999863221 1 1 0 1258999999999 9999864
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.01 E-value=2.6e-06 Score=70.97 Aligned_cols=82 Identities=17% Similarity=0.172 Sum_probs=55.5
Q ss_pred CCCeEEEECCcchHHHHHhc-----------------CceEEEecCC---------------------------------
Q 027441 141 PSLVIADFGCGDARLAKSVK-----------------NKVFSFDLVS--------------------------------- 170 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----------------~~v~gvDis~--------------------------------- 170 (223)
+..+|||||+|+|..+..+. .+++++|..+
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 45799999999999554421 2688999765
Q ss_pred ----------CCCcEEEccCCC-CCCCC----CceeEEEEcc-cccCC-C--HHHHHHHHHHccCCCCEEE
Q 027441 171 ----------NDPSVIACDMSN-TPLNS----SSVDVAVFCL-SLMGI-N--FPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 171 ----------~~~~~~~~d~~~-lp~~~----~sfD~Vi~~~-~l~~~-d--~~~~l~e~~rvLkpgG~lv 222 (223)
.++.++.+|+.. +|..+ ..||+|+... +-... + -+.+|..+.++|+|||+|+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ 210 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 210 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEE
Confidence 123355667644 44222 3799999853 22111 1 2489999999999999986
No 288
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.90 E-value=1.8e-05 Score=74.73 Aligned_cols=84 Identities=12% Similarity=0.090 Sum_probs=58.7
Q ss_pred CCCCeEEEECCcchHHHHHhc-----------------------------------------------CceEEEecCC--
Q 027441 140 SPSLVIADFGCGDARLAKSVK-----------------------------------------------NKVFSFDLVS-- 170 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-----------------------------------------------~~v~gvDis~-- 170 (223)
.++..|||.+||+|.++..++ ..|+|+|+++
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 367899999999999766543 2699999997
Q ss_pred --------------CCCcEEEccCCCC--CCCCCceeEEEEcccccC-C----CHH---HHHHHHHHccCCCCEEEc
Q 027441 171 --------------NDPSVIACDMSNT--PLNSSSVDVAVFCLSLMG-I----NFP---NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 171 --------------~~~~~~~~d~~~l--p~~~~sfD~Vi~~~~l~~-~----d~~---~~l~e~~rvLkpgG~lvi 223 (223)
..+.+..+|+..+ |...+.||+|++.--+.. + +.. ..+.++.+.+.|||.++|
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 2367889999876 444458999999844321 1 223 334455555668998875
No 289
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.89 E-value=3.9e-05 Score=64.72 Aligned_cols=92 Identities=12% Similarity=0.111 Sum_probs=63.6
Q ss_pred HHHHHHhcc----CCCCeEEEECC------cchHHHH--HhcC--ceEEEecCCCC---CcEEEccCCCCCCCCCceeEE
Q 027441 131 IIVKWLKDH----SPSLVIADFGC------GDARLAK--SVKN--KVFSFDLVSND---PSVIACDMSNTPLNSSSVDVA 193 (223)
Q Consensus 131 ~i~~~l~~~----~~~~~ILDiGc------G~G~~a~--~la~--~v~gvDis~~~---~~~~~~d~~~lp~~~~sfD~V 193 (223)
.+.++|... +-+.+|||+|+ .+|.+.. .+.. .|+++|+.+.. ..++.+|+..+.. ...||+|
T Consensus 95 qlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~sda~~~IqGD~~~~~~-~~k~DLV 173 (344)
T 3r24_A 95 QLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHT-ANKWDLI 173 (344)
T ss_dssp HHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGEEE-SSCEEEE
T ss_pred HHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccccCCCeEEEcccccccc-CCCCCEE
Confidence 566677432 45789999996 6676422 2222 79999999822 2458899765433 4789999
Q ss_pred EEcccccC---CC---------HHHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLMG---IN---------FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~~---~d---------~~~~l~e~~rvLkpgG~lvi 223 (223)
++-++-.- .| .+.++.=+.++|+|||.|++
T Consensus 174 ISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvV 215 (344)
T 3r24_A 174 ISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 215 (344)
T ss_dssp EECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEE
Confidence 98876542 11 34677778889999999985
No 290
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.73 E-value=8e-05 Score=59.77 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=55.2
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCC-------------C-----CCcEEEccCCCC---------------
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------N-----DPSVIACDMSNT--------------- 183 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~-------------~-----~~~~~~~d~~~l--------------- 183 (223)
+..+|||+||| +.+..++ ++|+.+|.++ . ++.++.+|+...
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 46899999996 4444443 6899999986 1 366777886432
Q ss_pred C--------C-CCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 184 P--------L-NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 184 p--------~-~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+ + ..++||+|+.-.... ..++..+.+.|+|||+|++
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k~----~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRFR----VGCALATAFSITRPVTLLF 152 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSSH----HHHHHHHHHHCSSCEEEEE
T ss_pred HHHhhhhhccccCCCCCEEEEeCCCc----hhHHHHHHHhcCCCeEEEE
Confidence 2 2 237899999877532 3677778899999999975
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.73 E-value=1.1e-05 Score=70.46 Aligned_cols=93 Identities=15% Similarity=0.125 Sum_probs=63.4
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-----CceEEEecCC---------------------CCCcEEEccCCCC
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------------NDPSVIACDMSNT 183 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~---------------------~~~~~~~~d~~~l 183 (223)
..+...+....++.+|||++||+|.=+..++ ..|+++|+++ .++.+...|...+
T Consensus 137 S~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~ 216 (359)
T 4fzv_A 137 SLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKW 216 (359)
T ss_dssp GHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGH
T ss_pred HHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhc
Confidence 3444455455588999999999998666665 3699999996 1344555666554
Q ss_pred C-CCCCceeEEE----Eccc---ccCCC--------H----------HHHHHHHHHccCCCCEEE
Q 027441 184 P-LNSSSVDVAV----FCLS---LMGIN--------F----------PNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 184 p-~~~~sfD~Vi----~~~~---l~~~d--------~----------~~~l~e~~rvLkpgG~lv 222 (223)
+ +..+.||.|+ |+.. +..-+ . ..+|..+.++|||||+|+
T Consensus 217 ~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LV 281 (359)
T 4fzv_A 217 GELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVV 281 (359)
T ss_dssp HHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred chhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 3 3457899999 3432 11101 0 178888999999999987
No 292
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.69 E-value=0.00011 Score=69.99 Aligned_cols=83 Identities=16% Similarity=0.217 Sum_probs=56.3
Q ss_pred CCCeEEEECCcchHHHHHhc--------CceEEEecCCCCC---------------------cEEEccCCCC-CCCCCce
Q 027441 141 PSLVIADFGCGDARLAKSVK--------NKVFSFDLVSNDP---------------------SVIACDMSNT-PLNSSSV 190 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la--------~~v~gvDis~~~~---------------------~~~~~d~~~l-p~~~~sf 190 (223)
++.+|||.|||+|.++..++ ..++|+|+++..+ .+...|+... +.....|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 46899999999999887765 2589999997321 1222233221 2235689
Q ss_pred eEEEEcccccC-C----------------------------C-HHHHHHHHHHccCCCCEEEc
Q 027441 191 DVAVFCLSLMG-I----------------------------N-FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 191 D~Vi~~~~l~~-~----------------------------d-~~~~l~e~~rvLkpgG~lvi 223 (223)
|+|++.--+.. . + ...++..+.+.|+|||.+++
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAf 463 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISA 463 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEE
Confidence 99998755421 1 1 22578889999999999875
No 293
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.68 E-value=7.9e-06 Score=72.43 Aligned_cols=56 Identities=13% Similarity=0.085 Sum_probs=44.7
Q ss_pred CCCeEEEECCcchHHHHHhc---CceEEEecCC------------C-----CCcEEEccCCCC-CC-CCCceeEEEEc
Q 027441 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------N-----DPSVIACDMSNT-PL-NSSSVDVAVFC 196 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---~~v~gvDis~------------~-----~~~~~~~d~~~l-p~-~~~sfD~Vi~~ 196 (223)
++.+|||+|||+|..+..++ .+|+++|+++ . ++.++.+|+..+ +. .+.+||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 37899999999999998887 5799999997 1 367888898764 32 24589999985
No 294
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.67 E-value=9.8e-05 Score=62.24 Aligned_cols=83 Identities=10% Similarity=-0.009 Sum_probs=60.5
Q ss_pred CCCCeEEEECCcchHHHHHhc----------CceEEEecCC---------------------------------------
Q 027441 140 SPSLVIADFGCGDARLAKSVK----------NKVFSFDLVS--------------------------------------- 170 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la----------~~v~gvDis~--------------------------------------- 170 (223)
.....|||+|+..|..+..++ .+|+++|...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 356899999999999766653 4689999531
Q ss_pred ----CCCcEEEccCCC-CC-CCCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 171 ----NDPSVIACDMSN-TP-LNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 171 ----~~~~~~~~d~~~-lp-~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.++.++.+++.+ +| ++..+||+|+.-.-. +-....+|..+.+.|+|||++++
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-YESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS-HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-cccHHHHHHHHHhhcCCCEEEEE
Confidence 345677777633 33 345789999977652 22345789999999999999985
No 295
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.38 E-value=9.1e-05 Score=64.81 Aligned_cols=82 Identities=17% Similarity=0.136 Sum_probs=57.0
Q ss_pred CCCeEEEECCcchHHHHHhc----CceEEEecCCC-----------------------CCcEEEccCCCC----CCCCCc
Q 027441 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVSN-----------------------DPSVIACDMSNT----PLNSSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~v~gvDis~~-----------------------~~~~~~~d~~~l----p~~~~s 189 (223)
+..+||=||.|.|..++.+. .+|+.+||.+. ++.++.+|...+ +-....
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 45899999999999988876 47889999871 133445554321 112457
Q ss_pred eeEEEEcccccCC--C---------HHHHHHHHHHccCCCCEEE
Q 027441 190 VDVAVFCLSLMGI--N---------FPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 190 fD~Vi~~~~l~~~--d---------~~~~l~e~~rvLkpgG~lv 222 (223)
||+|+.-..-... + -..++..+.++|+|||+++
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv 328 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYF 328 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEE
Confidence 9999976432111 1 1377889999999999987
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.33 E-value=0.00058 Score=62.37 Aligned_cols=99 Identities=21% Similarity=0.244 Sum_probs=67.2
Q ss_pred CCCchHHHHHHHHhccCCCCeEEEECCcchHHHHHhc------------------CceEEEecCC---------------
Q 027441 124 WPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------------------NKVFSFDLVS--------------- 170 (223)
Q Consensus 124 ~p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------------------~~v~gvDis~--------------- 170 (223)
-|...++.|.+.+... ++.+|+|-+||+|.+...+. ..++|+|+.+
T Consensus 201 TP~~Vv~lmv~l~~p~-~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~ 279 (530)
T 3ufb_A 201 TPRPVVRFMVEVMDPQ-LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL 279 (530)
T ss_dssp CCHHHHHHHHHHHCCC-TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHhhccC-CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC
Confidence 3666677777766544 67899999999999865442 2589999987
Q ss_pred CCCcEEEccCCCCCCC----CCceeEEEEcccccCC----------------CH-HHHHHHHHHccC-------CCCEEE
Q 027441 171 NDPSVIACDMSNTPLN----SSSVDVAVFCLSLMGI----------------NF-PNYLQEAQRVLK-------PRGEEQ 222 (223)
Q Consensus 171 ~~~~~~~~d~~~lp~~----~~sfD~Vi~~~~l~~~----------------d~-~~~l~e~~rvLk-------pgG~lv 222 (223)
....+..+|.-..|+. ...||+|++.--+..- +. ..++..+.+.|+ |||++.
T Consensus 280 ~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~a 359 (530)
T 3ufb_A 280 EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAA 359 (530)
T ss_dssp SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEE
T ss_pred ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEE
Confidence 2344566666554432 3579999988655311 11 157788888887 799886
Q ss_pred c
Q 027441 223 I 223 (223)
Q Consensus 223 i 223 (223)
|
T Consensus 360 v 360 (530)
T 3ufb_A 360 V 360 (530)
T ss_dssp E
T ss_pred E
Confidence 4
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.25 E-value=0.00036 Score=58.68 Aligned_cols=69 Identities=20% Similarity=0.205 Sum_probs=53.2
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC-----------CCCcEEEccCCCCC-----CCCCc
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-----------NDPSVIACDMSNTP-----LNSSS 189 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-----------~~~~~~~~d~~~lp-----~~~~s 189 (223)
++.+++.|... ++..+||.+||.|..+..++ .+|+|+|.++ .++.++.+++.+++ .....
T Consensus 11 l~e~le~L~~~-~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~~~ 89 (285)
T 1wg8_A 11 YQEALDLLAVR-PGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVER 89 (285)
T ss_dssp HHHHHHHHTCC-TTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSC
T ss_pred HHHHHHhhCCC-CCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcCCCC
Confidence 45667777654 78899999999999999887 5899999997 35678888887653 22357
Q ss_pred eeEEEEccc
Q 027441 190 VDVAVFCLS 198 (223)
Q Consensus 190 fD~Vi~~~~ 198 (223)
||.|++...
T Consensus 90 vDgIL~DLG 98 (285)
T 1wg8_A 90 VDGILADLG 98 (285)
T ss_dssp EEEEEEECS
T ss_pred cCEEEeCCc
Confidence 999997554
No 298
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.07 E-value=0.00042 Score=73.63 Aligned_cols=83 Identities=17% Similarity=0.172 Sum_probs=39.0
Q ss_pred CCCeEEEECCcchHHHHHhc----------CceEEEecCCCCC-----cE-----EE--ccCCCC-CCCCCceeEEEEcc
Q 027441 141 PSLVIADFGCGDARLAKSVK----------NKVFSFDLVSNDP-----SV-----IA--CDMSNT-PLNSSSVDVAVFCL 197 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----------~~v~gvDis~~~~-----~~-----~~--~d~~~l-p~~~~sfD~Vi~~~ 197 (223)
+..+||+||.|+|..+..+. ..++..|+|+... .| .. .|.... ++....||+||++.
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 56899999999997654332 2466788886322 11 11 132222 44567899999999
Q ss_pred cccCC-CHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGI-NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~-d~~~~l~e~~rvLkpgG~lvi 223 (223)
++|.+ +....|..+.++|+|||.|++
T Consensus 1320 vl~~t~~~~~~l~~~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1320 ALATLGDPAVAVGNMAATLKEGGFLLL 1346 (2512)
T ss_dssp C--------------------CCEEEE
T ss_pred cccccccHHHHHHHHHHhcCCCcEEEE
Confidence 99877 888999999999999999874
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.32 E-value=0.0024 Score=53.79 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=27.6
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCCC
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN 171 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~~ 171 (223)
.++..|||++||+|..+..++ .+++|+|+++.
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~ 268 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPR 268 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHH
Confidence 367899999999999888776 68999999973
No 300
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.85 E-value=0.0093 Score=50.65 Aligned_cols=82 Identities=16% Similarity=0.116 Sum_probs=52.8
Q ss_pred CCCeEEEECCcchHHHH-Hhc--------C--ceEEEecCC---------------------------C--CCcEEEccC
Q 027441 141 PSLVIADFGCGDARLAK-SVK--------N--KVFSFDLVS---------------------------N--DPSVIACDM 180 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~-~la--------~--~v~gvDis~---------------------------~--~~~~~~~d~ 180 (223)
+..+|||+|-|+|..+. .+. . +++++|..+ . ...+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 45789999999998432 121 1 356666532 0 123455666
Q ss_pred CC-CC-CCCCceeEEEEcccccCCCHH----HHHHHHHHccCCCCEEE
Q 027441 181 SN-TP-LNSSSVDVAVFCLSLMGINFP----NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 181 ~~-lp-~~~~sfD~Vi~~~~l~~~d~~----~~l~e~~rvLkpgG~lv 222 (223)
.. ++ +.+..||+|+.-.---..+|+ .++..++++++|||+|+
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 33 33 345579999876533333443 99999999999999986
No 301
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.40 E-value=0.032 Score=48.60 Aligned_cols=84 Identities=19% Similarity=0.135 Sum_probs=55.0
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCc------EEEccCCCCCC---------CCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPS------VIACDMSNTPL---------NSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~------~~~~d~~~lp~---------~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|||. |.++..++ . +|+++|.++.+.. ....|.....+ ....||+|+-+..
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g 263 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVG 263 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCC
Confidence 4788999999986 66666555 4 7999998862111 11223322221 1226999997765
Q ss_pred cc---------CCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LM---------GINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~---------~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.. |.+++..+..+.++|+|||.+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 264 FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp TTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred CccccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence 43 22345688999999999999874
No 302
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=95.33 E-value=0.0077 Score=51.81 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=49.9
Q ss_pred HHHHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC-----------CCCcEEEccCCCCC-----CC
Q 027441 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS-----------NDPSVIACDMSNTP-----LN 186 (223)
Q Consensus 129 ~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~-----------~~~~~~~~d~~~lp-----~~ 186 (223)
++.+++.|... ++..++|..||.|..+..++ .+|+|+|.++ .++.++.++..++. ..
T Consensus 46 l~Evl~~L~i~-pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 46 LDEAVNGLNIR-PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp THHHHHHTCCC-TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHHHHhhCCC-CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHhcC
Confidence 35667777654 78999999999999998876 4799999997 24556666665542 11
Q ss_pred -CCceeEEEEcccc
Q 027441 187 -SSSVDVAVFCLSL 199 (223)
Q Consensus 187 -~~sfD~Vi~~~~l 199 (223)
.+++|.|++...+
T Consensus 125 ~~~~vDgILfDLGV 138 (347)
T 3tka_A 125 LIGKIDGILLDLGV 138 (347)
T ss_dssp CTTCEEEEEEECSC
T ss_pred CCCcccEEEECCcc
Confidence 1368888876654
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=94.83 E-value=0.034 Score=48.14 Aligned_cols=57 Identities=14% Similarity=-0.006 Sum_probs=42.5
Q ss_pred chHHHHHHHHhccC-----CCCeEEEECCcchHHHHHhc-----CceEEEecCC------------CCCcEEEccCCCC
Q 027441 127 LPVNIIVKWLKDHS-----PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS------------NDPSVIACDMSNT 183 (223)
Q Consensus 127 ~~~~~i~~~l~~~~-----~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~------------~~~~~~~~d~~~l 183 (223)
+..+.|.+.+.... ++..|||||.|.|.++..|. .+|+++++.+ .++.++.+|+..+
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 34456666665432 35889999999999999887 3799999985 4677888888544
No 304
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=94.64 E-value=0.096 Score=44.83 Aligned_cols=90 Identities=12% Similarity=0.193 Sum_probs=59.7
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---Cc--eEEEecCC-----------------------------------
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NK--VFSFDLVS----------------------------------- 170 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~--v~gvDis~----------------------------------- 170 (223)
.+.+++.. .+...|+.||||....+..|. .. ++-+|.-.
T Consensus 88 ~v~~fl~~-~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~ 166 (334)
T 1rjd_A 88 AILEFLVA-NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQ 166 (334)
T ss_dssp HHHHHHHH-CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEEC
T ss_pred HHHHHHHH-CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCC
Confidence 33444443 366899999999998777765 23 44555421
Q ss_pred CCCcEEEccCCCCC--------C-CCCceeEEEEcccccCCCHH---HHHHHHHHccCCCCEEE
Q 027441 171 NDPSVIACDMSNTP--------L-NSSSVDVAVFCLSLMGINFP---NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 171 ~~~~~~~~d~~~lp--------~-~~~sfD~Vi~~~~l~~~d~~---~~l~e~~rvLkpgG~lv 222 (223)
.+..++.+|+.+.. . ......++++-.++++++++ .+|..+...+ |+|.++
T Consensus 167 ~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 167 GRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred CceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEE
Confidence 23456778886632 1 33567999999999999665 6666666666 777664
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.08 E-value=0.035 Score=45.59 Aligned_cols=44 Identities=18% Similarity=0.239 Sum_probs=32.0
Q ss_pred CCchHHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC
Q 027441 125 PELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS 170 (223)
Q Consensus 125 p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~ 170 (223)
|...+..++.... .++..|||..||+|..+.... .+++|+|+++
T Consensus 198 p~~l~~~~i~~~~--~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~ 244 (260)
T 1g60_A 198 PRDLIERIIRASS--NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNA 244 (260)
T ss_dssp CHHHHHHHHHHHC--CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCH
T ss_pred CHHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCH
Confidence 3333444444432 378899999999999877665 6899999986
No 306
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.35 E-value=0.16 Score=43.58 Aligned_cols=79 Identities=15% Similarity=0.249 Sum_probs=51.4
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcE-------EEccCCCCC-------CCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMSNTP-------LNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~-------~~~d~~~lp-------~~~~sfD~Vi~~~~l 199 (223)
.++.+||-+|||. |.++..++ . .|+++|.++.+..+ ...|..... +..+.||+|+.+...
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~ 268 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGS 268 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCC
Confidence 4678999999986 66665555 3 68999988632111 111221111 112369999866542
Q ss_pred cCCCHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+..+..+.++|+|||.+++
T Consensus 269 -----~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 269 -----PEILKQGVDALGILGKIAV 287 (371)
T ss_dssp -----HHHHHHHHHTEEEEEEEEE
T ss_pred -----HHHHHHHHHHHhcCCEEEE
Confidence 5678899999999999874
No 307
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.15 E-value=0.15 Score=44.19 Aligned_cols=84 Identities=21% Similarity=0.165 Sum_probs=54.3
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcE------EEccCCCCC-C--------CCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV------IACDMSNTP-L--------NSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~------~~~d~~~lp-~--------~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|||. |.++..++ . .|+++|.++.+..+ ...|..... + ....+|+|+-+-.
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G 263 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVG 263 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCC
Confidence 4778999999876 66666555 3 68999988622111 112222111 0 1236999997654
Q ss_pred c----------cCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 L----------MGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l----------~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. ||.+++..+..+.++|++||.+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 264 FEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp TTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred CcccccccccccccchHHHHHHHHHHHhcCCEEEE
Confidence 2 333666789999999999999863
No 308
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.81 E-value=0.031 Score=46.88 Aligned_cols=52 Identities=19% Similarity=0.214 Sum_probs=35.4
Q ss_pred CCcEEEccCCC-C-CCCCCceeEEEEcccccCC---------------------CHHHHHHHHHHccCCCCEEEc
Q 027441 172 DPSVIACDMSN-T-PLNSSSVDVAVFCLSLMGI---------------------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 172 ~~~~~~~d~~~-l-p~~~~sfD~Vi~~~~l~~~---------------------d~~~~l~e~~rvLkpgG~lvi 223 (223)
.+.++++|+.. + .+++++||+|++.--.... ....++.++.|+|+|||.|+|
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i 95 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVI 95 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 45567777654 2 2456789999887544311 123578899999999999875
No 309
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=92.73 E-value=0.15 Score=42.16 Aligned_cols=35 Identities=17% Similarity=0.101 Sum_probs=24.6
Q ss_pred CceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
..||+|+.-.-. +.....+++.+...|+|||++++
T Consensus 181 ~~~dlv~ID~D~-Y~~t~~~le~~~p~l~~GGvIv~ 215 (257)
T 3tos_A 181 TVIALAYFDLDL-YEPTKAVLEAIRPYLTKGSIVAF 215 (257)
T ss_dssp CCEEEEEECCCC-HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CceEEEEEcCcc-cchHHHHHHHHHHHhCCCcEEEE
Confidence 357777665532 11334678999999999999985
No 310
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.67 E-value=0.14 Score=43.48 Aligned_cols=76 Identities=13% Similarity=0.162 Sum_probs=50.6
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCc--------EEEccCCCCCCCCCceeEEEEcccccCCCHHH
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPS--------VIACDMSNTPLNSSSVDVAVFCLSLMGINFPN 206 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~--------~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~ 206 (223)
.++.+||-+|+|. |.++..++ .+|+++|.++.+.. .+..+... +. ..+|+|+-+..- +.
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~--~~-~~~D~vid~~g~-----~~ 246 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQ--CK-EELDFIISTIPT-----HY 246 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGG--CC-SCEEEEEECCCS-----CC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHH--Hh-cCCCEEEECCCc-----HH
Confidence 4788999999875 55555554 58999998874332 22222211 22 279999966542 23
Q ss_pred HHHHHHHccCCCCEEEc
Q 027441 207 YLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 207 ~l~e~~rvLkpgG~lvi 223 (223)
.+..+.++|+|+|.+++
T Consensus 247 ~~~~~~~~l~~~G~iv~ 263 (348)
T 3two_A 247 DLKDYLKLLTYNGDLAL 263 (348)
T ss_dssp CHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHhcCCEEEE
Confidence 57788899999999874
No 311
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.66 E-value=0.26 Score=38.04 Aligned_cols=77 Identities=17% Similarity=0.165 Sum_probs=48.8
Q ss_pred CCCCeEEEECCc--chHHHHHhc----CceEEEecCCCC--------CcEEEccCCCCC--------CCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSND--------PSVIACDMSNTP--------LNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG--~G~~a~~la----~~v~gvDis~~~--------~~~~~~d~~~lp--------~~~~sfD~Vi~~~ 197 (223)
.++.+||.+|++ .|..+..++ .+|+++|.++.. ... ..|..+.. .....+|+|+.+.
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 115 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSL 115 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECC
Confidence 367899999953 344443333 578899887521 111 22332211 1124699999765
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. ...+..+.++|+|||.+++
T Consensus 116 g------~~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 116 A------GEAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp C------THHHHHHHHTEEEEEEEEE
T ss_pred c------hHHHHHHHHHhccCCEEEE
Confidence 4 3578889999999999874
No 312
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.58 E-value=0.07 Score=45.62 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=50.3
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcE-------EEccCC-----CC-----CCCCCceeEEEEc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMS-----NT-----PLNSSSVDVAVFC 196 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~-------~~~d~~-----~l-----p~~~~sfD~Vi~~ 196 (223)
.++.+||-+|+|. |.++..++ . +|+++|.++.+..+ ...|.. ++ ......||+|+.+
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~ 249 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 249 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEEC
Confidence 4788999999875 66655554 3 79999988632111 111211 00 0001458999866
Q ss_pred ccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 197 LSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
... +..+..+.++|+|||.+++
T Consensus 250 ~g~-----~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 250 TGA-----EASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp SCC-----HHHHHHHHHHSCTTCEEEE
T ss_pred CCC-----hHHHHHHHHHhcCCCEEEE
Confidence 542 5678889999999999874
No 313
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=91.92 E-value=0.17 Score=38.62 Aligned_cols=82 Identities=13% Similarity=0.137 Sum_probs=53.3
Q ss_pred CCCeEEEECCcchHHHHHhc-----CceEEEecCC--------CCCcEEEccCCC-CCC----CCCceeEEEEcccccCC
Q 027441 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------NDPSVIACDMSN-TPL----NSSSVDVAVFCLSLMGI 202 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-----~~v~gvDis~--------~~~~~~~~d~~~-lp~----~~~sfD~Vi~~~~l~~~ 202 (223)
...-|||+|-|+|..=..|. ..|+++|-.- +.-.++.+|+.. +|. -....-+|++-...+.-
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G~g~~ 119 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERFGATASLVHADLGGHNR 119 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEEEEECCCCSCH
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhcCCceEEEEeecCCCCc
Confidence 35679999999998555444 5788887652 455788888854 332 14556667766665543
Q ss_pred CHH-----HHHHHHHHccCCCCEEE
Q 027441 203 NFP-----NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 203 d~~-----~~l~e~~rvLkpgG~lv 222 (223)
+.. .+-.-+..+|.|||+++
T Consensus 120 ~~d~a~a~~lsplI~~~la~GGi~v 144 (174)
T 3iht_A 120 EKNDRFARLISPLIEPHLAQGGLMV 144 (174)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred chhHHHHHhhhHHHHHHhcCCcEEE
Confidence 222 22234568999999986
No 314
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.75 E-value=0.065 Score=45.50 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=37.5
Q ss_pred CCCcEEEccCCC-CC-CCCCceeEEEEcccccCC---------------CHHHHHHHHHHccCCCCEEEc
Q 027441 171 NDPSVIACDMSN-TP-LNSSSVDVAVFCLSLMGI---------------NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 171 ~~~~~~~~d~~~-lp-~~~~sfD~Vi~~~~l~~~---------------d~~~~l~e~~rvLkpgG~lvi 223 (223)
....++.+|... +. +++++||+|++.--.... ....+|.++.|+|+|||.++|
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i 82 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVV 82 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEE
Confidence 345667777643 33 567889999987443211 245889999999999999985
No 315
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.11 E-value=0.099 Score=44.24 Aligned_cols=79 Identities=14% Similarity=0.191 Sum_probs=51.4
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCCC------CCCceeEEEEcccccC
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTPL------NSSSVDVAVFCLSLMG 201 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp~------~~~sfD~Vi~~~~l~~ 201 (223)
.++.+||-+|+|. |.++..++ .+|+++|.++.+..+ ...|.....+ ..+.+|+|+.+..
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g--- 241 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAV--- 241 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCC---
Confidence 4778999999975 66666665 589999988632211 1122222111 0136898886543
Q ss_pred CCHHHHHHHHHHccCCCCEEEc
Q 027441 202 INFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~d~~~~l~e~~rvLkpgG~lvi 223 (223)
-...+..+.++|+|+|.+++
T Consensus 242 --~~~~~~~~~~~l~~~G~iv~ 261 (340)
T 3s2e_A 242 --SPKAFSQAIGMVRRGGTIAL 261 (340)
T ss_dssp --CHHHHHHHHHHEEEEEEEEE
T ss_pred --CHHHHHHHHHHhccCCEEEE
Confidence 16788899999999999874
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=90.83 E-value=0.29 Score=41.98 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=51.0
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcE-------EEccCCCC----------CCCCCceeEEEEc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMSNT----------PLNSSSVDVAVFC 196 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~-------~~~d~~~l----------p~~~~sfD~Vi~~ 196 (223)
.++.+||=+|+|. |.++..++ . .|+++|.++.+..+ ...|.... .+..+.||+|+-+
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~ 260 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIEC 260 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEEC
Confidence 4788999999875 55555554 3 78999988622111 11121111 1223479999965
Q ss_pred ccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 197 LSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 197 ~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
... ...+..+.++|++||.+++
T Consensus 261 ~G~-----~~~~~~~~~~l~~~G~vv~ 282 (370)
T 4ej6_A 261 AGV-----AETVKQSTRLAKAGGTVVI 282 (370)
T ss_dssp SCC-----HHHHHHHHHHEEEEEEEEE
T ss_pred CCC-----HHHHHHHHHHhccCCEEEE
Confidence 442 5678899999999999874
No 317
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.63 E-value=0.68 Score=39.01 Aligned_cols=78 Identities=18% Similarity=0.218 Sum_probs=49.3
Q ss_pred CCCCeEEEECCcc--hHHHHHhc----CceEEEecCCCCCcEE-------EccCCCCC--------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGD--ARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSNTP--------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~--G~~a~~la----~~v~gvDis~~~~~~~-------~~d~~~lp--------~~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|+|. |..+..++ .+|+++|.++....+. ..|..... .....||+|+.+..
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 222 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIG 222 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCC
Confidence 4778999999985 44544444 5899999887443221 12222211 11246999997765
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+.+..++|+|||.+++
T Consensus 223 ------~~~~~~~~~~l~~~G~iv~ 241 (340)
T 3gms_A 223 ------GPDGNELAFSLRPNGHFLT 241 (340)
T ss_dssp ------HHHHHHHHHTEEEEEEEEE
T ss_pred ------ChhHHHHHHHhcCCCEEEE
Confidence 2333455589999999874
No 318
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=90.42 E-value=1.6 Score=36.75 Aligned_cols=81 Identities=12% Similarity=0.071 Sum_probs=56.0
Q ss_pred CeEEEECCcchHHHHHhc----CceEEEecCC-----------------CCCcEEEccCCCC--------CCCCCceeEE
Q 027441 143 LVIADFGCGDARLAKSVK----NKVFSFDLVS-----------------NDPSVIACDMSNT--------PLNSSSVDVA 193 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la----~~v~gvDis~-----------------~~~~~~~~d~~~l--------p~~~~sfD~V 193 (223)
..|++||||-=..+..+. ..|+-+|.-. .+..++.+|+.+- .|....--++
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~~ 183 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTAW 183 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCEEE
Confidence 569999999776666665 2466666321 2345677888651 1223445788
Q ss_pred EEcccccCCCH---HHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLMGINF---PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~~~d~---~~~l~e~~rvLkpgG~lvi 223 (223)
++..+++|++. ..+|..+...+.||+.|++
T Consensus 184 i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~ 216 (310)
T 2uyo_A 184 LAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAV 216 (310)
T ss_dssp EECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEE
T ss_pred EEechHhhCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 89999999944 3788888888889998874
No 319
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=90.07 E-value=0.25 Score=42.91 Aligned_cols=55 Identities=15% Similarity=0.088 Sum_probs=41.5
Q ss_pred CeEEEECCcchHHHHHhc----CceEEEecCC----------CCCcEEEccCCCCCC--------CCCceeEEEEcc
Q 027441 143 LVIADFGCGDARLAKSVK----NKVFSFDLVS----------NDPSVIACDMSNTPL--------NSSSVDVAVFCL 197 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la----~~v~gvDis~----------~~~~~~~~d~~~lp~--------~~~sfD~Vi~~~ 197 (223)
.++||+-||.|.++..+. ..|.++|+++ ....++.+|+..+.. ....+|+|+...
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGP 79 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecC
Confidence 579999999999888775 3577999987 355677888877631 345799999653
No 320
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=89.58 E-value=0.31 Score=41.75 Aligned_cols=79 Identities=18% Similarity=0.239 Sum_probs=50.4
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcE-------EEccCCC--CCC-------CCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMSN--TPL-------NSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~-------~~~d~~~--lp~-------~~~sfD~Vi~~~ 197 (223)
.++.+||-+|+|. |.++..++ . +|+++|.++.+..+ ...|..+ ..+ ..+.+|+|+.+.
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 270 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECV 270 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECC
Confidence 4678999999875 55555554 3 79999988743221 1112211 000 123689998665
Q ss_pred cccCCCHHHHHHHHHHccCCC-CEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPR-GEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpg-G~lvi 223 (223)
.. +..+..+.++|+|| |.+++
T Consensus 271 g~-----~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 271 GN-----VGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp CC-----HHHHHHHHHTBCTTTCEEEE
T ss_pred CC-----HHHHHHHHHHhhcCCcEEEE
Confidence 42 56788999999999 99874
No 321
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=89.54 E-value=0.31 Score=40.62 Aligned_cols=74 Identities=12% Similarity=0.016 Sum_probs=45.8
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCcE--------EEccCCCCCCCCCceeEEEEcccccCCCHHH
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSV--------IACDMSNTPLNSSSVDVAVFCLSLMGINFPN 206 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~~--------~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~ 206 (223)
.++.+||=+|+|. |.++..++ .+|++++ ++.+..+ +.-|...+ ...||+|+-+..- .
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v---~~g~Dvv~d~~g~------~ 210 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQV---TQKYFAIFDAVNS------Q 210 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGC---CSCEEEEECC----------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHh---CCCccEEEECCCc------h
Confidence 4788999999964 55555554 5899999 7744321 12122222 4679999865542 2
Q ss_pred HHHHHHHccCCCCEEEc
Q 027441 207 YLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 207 ~l~e~~rvLkpgG~lvi 223 (223)
.+..+.++|+|+|.+++
T Consensus 211 ~~~~~~~~l~~~G~~v~ 227 (315)
T 3goh_A 211 NAAALVPSLKANGHIIC 227 (315)
T ss_dssp ---TTGGGEEEEEEEEE
T ss_pred hHHHHHHHhcCCCEEEE
Confidence 23567899999999863
No 322
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.48 E-value=0.22 Score=42.37 Aligned_cols=79 Identities=9% Similarity=0.075 Sum_probs=50.0
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCcE-------EEccCCC-CCC--------C---CCceeEEEE
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSN-TPL--------N---SSSVDVAVF 195 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~-lp~--------~---~~sfD~Vi~ 195 (223)
.++.+||-+|+|. |.++..++ .+|+++|.++.+..+ ...|..+ ..+ . ...+|+|+.
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid 246 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID 246 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEE
Confidence 4778999999875 55555554 469999987622111 1122221 111 0 245899986
Q ss_pred cccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+... ...+..+.++|+|+|.+++
T Consensus 247 ~~g~-----~~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 247 CSGN-----EKCITIGINITRTGGTLML 269 (352)
T ss_dssp CSCC-----HHHHHHHHHHSCTTCEEEE
T ss_pred CCCC-----HHHHHHHHHHHhcCCEEEE
Confidence 6542 4578889999999999874
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=89.40 E-value=0.49 Score=40.10 Aligned_cols=79 Identities=13% Similarity=0.139 Sum_probs=50.4
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcE-------EEccCCCCC--------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~-------~~~d~~~lp--------~~~~sfD~Vi~~~~ 198 (223)
.++.+||=+|+|. |.++..++ . +|+++|.++.+..+ ...|..... .....||+|+-+..
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g 244 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGG 244 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 4778899999875 55555555 3 79999987632111 111111111 11236999996554
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. +..+..+.++|+|||.+++
T Consensus 245 ~-----~~~~~~~~~~l~~~G~~v~ 264 (352)
T 3fpc_A 245 D-----VHTFAQAVKMIKPGSDIGN 264 (352)
T ss_dssp C-----TTHHHHHHHHEEEEEEEEE
T ss_pred C-----hHHHHHHHHHHhcCCEEEE
Confidence 2 3578889999999999873
No 324
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.27 E-value=0.17 Score=42.68 Aligned_cols=78 Identities=12% Similarity=0.035 Sum_probs=50.5
Q ss_pred CCCCeEEEECCc--chHHHHHhc----CceEEEecCCCCCcE--------EEccCCCCC-------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPSV--------IACDMSNTP-------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG--~G~~a~~la----~~v~gvDis~~~~~~--------~~~d~~~lp-------~~~~sfD~Vi~~~~ 198 (223)
.++.+||-+||+ .|..+..++ .+|+++|.++..... ...|..... ...+.+|+|+.+..
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 227 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVG 227 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence 478899999983 455554444 589999987622211 112222211 11246999997766
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|++||.+++
T Consensus 228 ------~~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 228 ------GEILDTVLTRIAFKARIVL 246 (336)
T ss_dssp ------HHHHHHHHTTEEEEEEEEE
T ss_pred ------cchHHHHHHHHhhCCEEEE
Confidence 3578899999999999874
No 325
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.01 E-value=0.39 Score=40.33 Aligned_cols=78 Identities=10% Similarity=0.042 Sum_probs=49.4
Q ss_pred CCCCeEEEECCc--chHHHHHhc----CceEEEecCCCCCc-------EEEccCCC-CC-------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPS-------VIACDMSN-TP-------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG--~G~~a~~la----~~v~gvDis~~~~~-------~~~~d~~~-lp-------~~~~sfD~Vi~~~~ 198 (223)
.++.+||-+||+ .|..+..++ .+|+++|.++.... ....|..+ .. ...+.+|+|+.+..
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 223 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 223 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 467899999984 444444433 57899988752111 11234332 11 01246999998776
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|+|||.+++
T Consensus 224 ------~~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 224 ------GEFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp ------HHHHHHHHTTEEEEEEEEE
T ss_pred ------hHHHHHHHHHHhcCCEEEE
Confidence 3458888999999999863
No 326
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.83 E-value=0.41 Score=41.08 Aligned_cols=79 Identities=19% Similarity=0.294 Sum_probs=51.0
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcEE-------EccCC--CCC-------CCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSVI-------ACDMS--NTP-------LNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~~-------~~d~~--~lp-------~~~~sfD~Vi~~~ 197 (223)
.++.+||=+|+|. |.++..++ . +|+++|.++.+..+. ..|.. ... +..+.||+|+-+.
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~ 271 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECI 271 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECC
Confidence 4678899999974 55555554 3 799999887432211 11211 110 1123699998665
Q ss_pred cccCCCHHHHHHHHHHccCCC-CEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPR-GEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpg-G~lvi 223 (223)
.. +..+..+.++|++| |.+++
T Consensus 272 g~-----~~~~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 272 GN-----VSVMRAALECCHKGWGTSVI 293 (378)
T ss_dssp CC-----HHHHHHHHHTBCTTTCEEEE
T ss_pred CC-----HHHHHHHHHHhhccCCEEEE
Confidence 42 57889999999997 98874
No 327
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=88.79 E-value=0.37 Score=41.21 Aligned_cols=79 Identities=16% Similarity=0.130 Sum_probs=50.6
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcEE-------EccCCC----C-----CCCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSVI-------ACDMSN----T-----PLNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~~-------~~d~~~----l-----p~~~~sfD~Vi~~~ 197 (223)
.++.+||-+|+|. |.++..++ . +|+++|.++.+..+. ..|..+ + .+..+.||+|+-+.
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~ 269 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECA 269 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECC
Confidence 4678999999875 55555554 3 799999887332211 112111 1 01123699998665
Q ss_pred cccCCCHHHHHHHHHHccCCC-CEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPR-GEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpg-G~lvi 223 (223)
.. +..+..+.++|+++ |.+++
T Consensus 270 g~-----~~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 270 GR-----IETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp CC-----HHHHHHHHHTBCTTTCEEEE
T ss_pred CC-----HHHHHHHHHHHhcCCCEEEE
Confidence 42 56788999999999 99873
No 328
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=88.50 E-value=0.37 Score=40.29 Aligned_cols=92 Identities=9% Similarity=-0.026 Sum_probs=63.8
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCC-------------CCCcEEEccCCC-C---CCCCCce
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSN-T---PLNSSSV 190 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~-l---p~~~~sf 190 (223)
.+++.+... .+..+||+=+|+|.++..+. .+++.+|.++ .++.++..|... + .-+...|
T Consensus 82 ~yf~~l~~~-n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~f 160 (283)
T 2oo3_A 82 EYISVIKQI-NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKR 160 (283)
T ss_dssp HHHHHHHHH-SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSC
T ss_pred HHHHHHHHh-cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCc
Confidence 455555554 45678999999999999887 4789999986 235566666422 1 1123569
Q ss_pred eEEEEcccccC-CCHHHHHHHHHH--ccCCCCEEEc
Q 027441 191 DVAVFCLSLMG-INFPNYLQEAQR--VLKPRGEEQI 223 (223)
Q Consensus 191 D~Vi~~~~l~~-~d~~~~l~e~~r--vLkpgG~lvi 223 (223)
|+|++-=.++. -++..++..+.. .+-|+|+++|
T Consensus 161 dLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 161 GLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp EEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred cEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 99998887774 366677766665 4568998875
No 329
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=88.49 E-value=0.39 Score=41.12 Aligned_cols=79 Identities=13% Similarity=0.141 Sum_probs=50.4
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcEE-------EccCCC----C-----CCCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSVI-------ACDMSN----T-----PLNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~~-------~~d~~~----l-----p~~~~sfD~Vi~~~ 197 (223)
.++.+||-+|+|. |.++..++ . +|+++|.++.+..+. ..|..+ + .+..+.+|+|+.+.
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 269 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI 269 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECC
Confidence 4678999999875 55555554 3 799999887432211 112211 1 01123699998665
Q ss_pred cccCCCHHHHHHHHHHccCCC-CEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPR-GEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpg-G~lvi 223 (223)
.. +..+..+.++|+++ |.+++
T Consensus 270 g~-----~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 270 GR-----LDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp CC-----HHHHHHHHHHBCTTTCEEEE
T ss_pred CC-----HHHHHHHHHHhhcCCcEEEE
Confidence 42 56788999999999 99873
No 330
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=88.45 E-value=0.38 Score=41.12 Aligned_cols=79 Identities=16% Similarity=0.260 Sum_probs=50.5
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcEE-------EccCCC--CC-------CCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSVI-------ACDMSN--TP-------LNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~~-------~~d~~~--lp-------~~~~sfD~Vi~~~ 197 (223)
.++.+||-+|+|. |.++..++ . .|+++|.++.+..+. ..|..+ .. +..+.+|+|+.+.
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~ 268 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECI 268 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECC
Confidence 4678999999875 55555554 4 799999887432211 112111 00 1123699998665
Q ss_pred cccCCCHHHHHHHHHHccCCC-CEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPR-GEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpg-G~lvi 223 (223)
.. ...+..+.++|+|+ |.+++
T Consensus 269 g~-----~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 269 GN-----VKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp CC-----HHHHHHHHHTBCTTTCEEEE
T ss_pred Cc-----HHHHHHHHHhhccCCcEEEE
Confidence 42 56788999999999 99874
No 331
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.38 E-value=0.39 Score=40.98 Aligned_cols=78 Identities=10% Similarity=0.068 Sum_probs=49.2
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCcE-------EEccC--CCCC------CCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSV-------IACDM--SNTP------LNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~~-------~~~d~--~~lp------~~~~sfD~Vi~~~~l 199 (223)
.++.+||-+|+|. |.++..++ .+|+++|.++.+..+ ...|- .++. .....+|+|+.+..
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g- 266 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG- 266 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 4778999999875 55555554 589999987622111 11121 1110 11236999997665
Q ss_pred cCCCHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|+|||.+++
T Consensus 267 -----~~~~~~~~~~l~~~G~iv~ 285 (363)
T 3uog_A 267 -----GAGLGQSLKAVAPDGRISV 285 (363)
T ss_dssp -----SSCHHHHHHHEEEEEEEEE
T ss_pred -----hHHHHHHHHHhhcCCEEEE
Confidence 2356778889999999874
No 332
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=88.26 E-value=0.2 Score=42.91 Aligned_cols=56 Identities=14% Similarity=0.249 Sum_probs=41.0
Q ss_pred CeEEEECCcchHHHHHhc--C----ceEEEecCC----------CCCcEEEccCCCCCC---CCCceeEEEEccc
Q 027441 143 LVIADFGCGDARLAKSVK--N----KVFSFDLVS----------NDPSVIACDMSNTPL---NSSSVDVAVFCLS 198 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la--~----~v~gvDis~----------~~~~~~~~d~~~lp~---~~~sfD~Vi~~~~ 198 (223)
.+|||+-||.|.++..+. + .|+++|+++ ....++.+|+..+.. +...+|+|+...-
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 579999999999887775 3 588999987 344567888877642 1125899997643
No 333
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=88.23 E-value=0.43 Score=40.88 Aligned_cols=79 Identities=19% Similarity=0.229 Sum_probs=50.4
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcEE-------EccCCC--CC-------CCCCceeEEEEcc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSVI-------ACDMSN--TP-------LNSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~~-------~~d~~~--lp-------~~~~sfD~Vi~~~ 197 (223)
.++.+||-+|+|. |.++..++ . +|+++|.++.+..+. ..|..+ .. +..+.+|+|+-+.
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~ 273 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA 273 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECC
Confidence 4678999999874 55555554 3 799999887432211 112111 00 0123689998665
Q ss_pred cccCCCHHHHHHHHHHccCCC-CEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPR-GEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpg-G~lvi 223 (223)
.. +..+..+.++|++| |.+++
T Consensus 274 G~-----~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 274 GT-----AQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp CC-----HHHHHHHHHTBCTTTCEEEE
T ss_pred CC-----HHHHHHHHHHhhcCCCEEEE
Confidence 42 56788999999999 99874
No 334
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=87.82 E-value=0.26 Score=41.70 Aligned_cols=80 Identities=15% Similarity=0.239 Sum_probs=50.9
Q ss_pred cCCCCeEEEECCcc-hHHHHHhc-----CceEEEecCCCCCcEE-------EccCCC-CC-----C-CCCceeEEEEccc
Q 027441 139 HSPSLVIADFGCGD-ARLAKSVK-----NKVFSFDLVSNDPSVI-------ACDMSN-TP-----L-NSSSVDVAVFCLS 198 (223)
Q Consensus 139 ~~~~~~ILDiGcG~-G~~a~~la-----~~v~gvDis~~~~~~~-------~~d~~~-lp-----~-~~~sfD~Vi~~~~ 198 (223)
..++.+||-+|+|. |.++..++ .+|+++|.++.+..+. ..|... +. + ....+|+|+-+-.
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G 248 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVG 248 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCC
Confidence 34788999999975 55555444 5799999887322110 111111 00 0 1236999986654
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
- +..+..+.++|+|||.+++
T Consensus 249 ~-----~~~~~~~~~~l~~~G~iv~ 268 (345)
T 3jv7_A 249 A-----QSTIDTAQQVVAVDGHISV 268 (345)
T ss_dssp C-----HHHHHHHHHHEEEEEEEEE
T ss_pred C-----HHHHHHHHHHHhcCCEEEE
Confidence 2 5588999999999999874
No 335
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=87.78 E-value=0.29 Score=41.45 Aligned_cols=78 Identities=18% Similarity=0.151 Sum_probs=49.5
Q ss_pred CCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcE------EEccCCCCCC-------CCCceeEEEEcccccC
Q 027441 141 PSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV------IACDMSNTPL-------NSSSVDVAVFCLSLMG 201 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~------~~~d~~~lp~-------~~~sfD~Vi~~~~l~~ 201 (223)
++.+||-+|+|. |.++..++ . +|+++|.++....+ ...|.....+ ....+|+|+.+...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~-- 241 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGN-- 241 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCC--
Confidence 678999999864 45555444 4 89999987632211 1122221110 02359999866542
Q ss_pred CCHHHHHHHHHHccCCCCEEEc
Q 027441 202 INFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+..+..+.++|+++|.+++
T Consensus 242 ---~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 242 ---EAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp ---HHHHHHHHHHEEEEEEEEE
T ss_pred ---HHHHHHHHHHHhcCCEEEE
Confidence 4678889999999999873
No 336
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=87.13 E-value=0.34 Score=41.07 Aligned_cols=79 Identities=11% Similarity=0.138 Sum_probs=50.5
Q ss_pred CCCCeEEEECCc--chHHHHHhc----CceEEEecCCCCCcE-------EEccCCC-CCC-------CCCceeEEEEccc
Q 027441 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSN-TPL-------NSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG--~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~-lp~-------~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|++ .|..+..++ .+|+++|.++..... ...|..+ ..+ ..+.+|+|+.+..
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 247 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSV 247 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence 467899999983 455444443 579999987632211 1224331 110 0126999987765
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. ...+..+.++|+++|.+++
T Consensus 248 ~-----~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 248 S-----EAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp C-----HHHHHHHTTSEEEEEEEEE
T ss_pred c-----HHHHHHHHHHHhcCCEEEE
Confidence 2 4678899999999999873
No 337
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=86.89 E-value=0.84 Score=38.46 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=50.2
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCCCC------CCceeEEEEcccccC
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTPLN------SSSVDVAVFCLSLMG 201 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp~~------~~sfD~Vi~~~~l~~ 201 (223)
.++.+||-+|+|. |..+..++ .+|+++|.++....+ ...|..+..+. ...+|+|+.+...
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~-- 240 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVS-- 240 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCC--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCC--
Confidence 4778999999964 55554444 589999987622111 11233221110 0369999876552
Q ss_pred CCHHHHHHHHHHccCCCCEEEc
Q 027441 202 INFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|+++|.+++
T Consensus 241 ---~~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 241 ---KPAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp ---HHHHHHHHHHEEEEEEEEE
T ss_pred ---HHHHHHHHHHhhcCCEEEE
Confidence 4678889999999999873
No 338
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.76 E-value=0.28 Score=42.17 Aligned_cols=78 Identities=17% Similarity=0.277 Sum_probs=49.5
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCcEE-------EccCCCC----CCCCCceeEEEEcccccCCC
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSNT----PLNSSSVDVAVFCLSLMGIN 203 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~~~-------~~d~~~l----p~~~~sfD~Vi~~~~l~~~d 203 (223)
.++.+||-+|+|. |.++..++ .+|+++|.++.+..+. ..|.... .+. ..||+|+.+...
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~-~g~Dvvid~~g~---- 267 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL-KSFDFILNTVAA---- 267 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT-TCEEEEEECCSS----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh-cCCCEEEECCCC----
Confidence 4778999999975 55555554 5799999887432211 1121110 011 469999976552
Q ss_pred HHHHHHHHHHccCCCCEEEc
Q 027441 204 FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lvi 223 (223)
+..+..+.++|+|+|.+++
T Consensus 268 -~~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 268 -PHNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp -CCCHHHHHTTEEEEEEEEE
T ss_pred -HHHHHHHHHHhccCCEEEE
Confidence 2346778899999999863
No 339
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=86.18 E-value=1.4 Score=37.13 Aligned_cols=78 Identities=15% Similarity=0.191 Sum_probs=49.8
Q ss_pred CCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcE-------EEccCCCCCC--------CCCceeEEEEcccc
Q 027441 141 PSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMSNTPL--------NSSSVDVAVFCLSL 199 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~-------~~~d~~~lp~--------~~~sfD~Vi~~~~l 199 (223)
++.+||-+|+|. |.++..++ . +|+++|.++....+ ...|.....+ ....+|+|+.+...
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 678899999964 55554444 4 89999988632111 1122221110 12369999976552
Q ss_pred cCCCHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+..+..+.++|+++|.+++
T Consensus 247 -----~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 247 -----PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp -----HHHHHHHHHHEEEEEEEEE
T ss_pred -----HHHHHHHHHHHhcCCEEEE
Confidence 5678889999999999873
No 340
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=85.90 E-value=2.6 Score=35.68 Aligned_cols=79 Identities=11% Similarity=0.097 Sum_probs=49.7
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcEE----------EccCC---CC------CCCCCceeEEE
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSVI----------ACDMS---NT------PLNSSSVDVAV 194 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~~----------~~d~~---~l------p~~~~sfD~Vi 194 (223)
.++.+||=+|+|. |.++..++ . .|+++|.++.+..+. ..+.. ++ -.....+|+|+
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvi 257 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVAL 257 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEE
Confidence 4778899999875 55555555 3 489999886322111 11100 00 01134689998
Q ss_pred EcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 195 FCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 195 ~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
-+... +..+..+.++|++||.+++
T Consensus 258 d~~g~-----~~~~~~~~~~l~~~G~iv~ 281 (363)
T 3m6i_A 258 ECTGV-----ESSIAAAIWAVKFGGKVFV 281 (363)
T ss_dssp ECSCC-----HHHHHHHHHHSCTTCEEEE
T ss_pred ECCCC-----hHHHHHHHHHhcCCCEEEE
Confidence 66542 4578899999999999874
No 341
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=85.62 E-value=0.69 Score=42.93 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=26.6
Q ss_pred CCceeEEEEcccccCCCH----HHHHHHHHHccCCCCEEE
Q 027441 187 SSSVDVAVFCLSLMGINF----PNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 187 ~~sfD~Vi~~~~l~~~d~----~~~l~e~~rvLkpgG~lv 222 (223)
...||+|+.-...-..++ ..++..+.++++|||.|.
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 216 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 216 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEE
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 367999987553333333 389999999999999985
No 342
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=85.31 E-value=0.53 Score=43.89 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=25.9
Q ss_pred CCceeEEEEcccccCCCH----HHHHHHHHHccCCCCEEE
Q 027441 187 SSSVDVAVFCLSLMGINF----PNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 187 ~~sfD~Vi~~~~l~~~d~----~~~l~e~~rvLkpgG~lv 222 (223)
+..||+++.-...-..++ ..++..+.++++|||.+.
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 467999987553322232 489999999999999875
No 343
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=85.29 E-value=1.2 Score=37.60 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=48.7
Q ss_pred CCCCeEEEECCc--chHHHHHhc----CceEEEecCCCCCcEE-------EccCC-CCC------CCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMS-NTP------LNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG--~G~~a~~la----~~v~gvDis~~~~~~~-------~~d~~-~lp------~~~~sfD~Vi~~~~l 199 (223)
.++.+||-+|++ .|..+..++ .+|++++.++....+. ..|.. ++. .....+|+|+.+...
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~ 237 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG 237 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch
Confidence 467899999983 355555554 5899999876322111 11211 110 112369999977662
Q ss_pred cCCCHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
..+..+.++|++||.+++
T Consensus 238 ------~~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 238 ------PAFDDAVRTLASEGRLLV 255 (342)
T ss_dssp -------CHHHHHHTEEEEEEEEE
T ss_pred ------hHHHHHHHhhcCCCEEEE
Confidence 357788899999999874
No 344
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=85.25 E-value=1.2 Score=37.46 Aligned_cols=78 Identities=9% Similarity=0.009 Sum_probs=49.7
Q ss_pred CCCCeEEEECC--cchHHHHHhc----CceEEEecCCCCCc--------EEEccCCCC-CC-------CCCceeEEEEcc
Q 027441 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPS--------VIACDMSNT-PL-------NSSSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGc--G~G~~a~~la----~~v~gvDis~~~~~--------~~~~d~~~l-p~-------~~~sfD~Vi~~~ 197 (223)
.++.+||-+|| |.|..+..++ .+|+++|.++.... ....|..+. .+ ....+|+|+.+.
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 233 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENV 233 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECC
Confidence 46789999998 3455544444 57899988752111 112233221 11 124699999776
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. ...+..+.++|+|||.+++
T Consensus 234 g------~~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 234 G------GKMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp C------HHHHHHHHTTEEEEEEEEE
T ss_pred C------HHHHHHHHHHHhcCCEEEE
Confidence 5 3478889999999999864
No 345
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=85.09 E-value=0.59 Score=40.92 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=26.6
Q ss_pred CCCCeEEEECCcchHHHHHhc-------CceEEEecCC
Q 027441 140 SPSLVIADFGCGDARLAKSVK-------NKVFSFDLVS 170 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la-------~~v~gvDis~ 170 (223)
.++..|+||||+.|.++..++ .+|+++++++
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p 262 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDR 262 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCH
Confidence 477899999999999887654 4799999997
No 346
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=84.39 E-value=3.4 Score=34.92 Aligned_cols=75 Identities=17% Similarity=0.281 Sum_probs=48.6
Q ss_pred CeEEEECCcc-hHHH-HHhc-----Cc-eEEEecCCC---CCcEE-------EccCCCCCCC-----CCceeEEEEcccc
Q 027441 143 LVIADFGCGD-ARLA-KSVK-----NK-VFSFDLVSN---DPSVI-------ACDMSNTPLN-----SSSVDVAVFCLSL 199 (223)
Q Consensus 143 ~~ILDiGcG~-G~~a-~~la-----~~-v~gvDis~~---~~~~~-------~~d~~~lp~~-----~~sfD~Vi~~~~l 199 (223)
.+||-+|+|. |.++ ..++ .+ |+++|.++. +..+. + |.....+. .+.||+|+-+...
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~i~~~~gg~Dvvid~~g~ 252 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQTPVEDVPDVYEQMDFIYEATGF 252 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTSCGGGHHHHSCCEEEEEECSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCccCHHHHHHhCCCCCEEEECCCC
Confidence 8999999864 5555 4444 34 999998775 33221 1 33221111 1369999865542
Q ss_pred cCCCHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+..+..+.++|+|+|.+++
T Consensus 253 -----~~~~~~~~~~l~~~G~iv~ 271 (357)
T 2b5w_A 253 -----PKHAIQSVQALAPNGVGAL 271 (357)
T ss_dssp -----HHHHHHHHHHEEEEEEEEE
T ss_pred -----hHHHHHHHHHHhcCCEEEE
Confidence 4578899999999999873
No 347
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=84.10 E-value=1.6 Score=36.93 Aligned_cols=78 Identities=10% Similarity=0.104 Sum_probs=49.0
Q ss_pred CCCCeEEEECCc--chHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCCC--------CCCceeEEEEccc
Q 027441 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTPL--------NSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG--~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp~--------~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|++ .|..+..++ .+|+++|.++....+ ...|..+..+ ....+|+|+.+..
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G 248 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA 248 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCC
Confidence 467899999973 344444443 578999887521110 1223322111 1236999997766
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|+|+|.+++
T Consensus 249 ------~~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 249 ------NVNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp ------HHHHHHHHHHEEEEEEEEE
T ss_pred ------hHHHHHHHHhccCCCEEEE
Confidence 3467788999999999874
No 348
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=83.95 E-value=0.3 Score=42.06 Aligned_cols=79 Identities=11% Similarity=0.118 Sum_probs=49.1
Q ss_pred CCCCeEEEECCcc-hHHHHHhc-----CceEEEecCCCCCcE-------EEccCC---CCC-------C-CCCceeEEEE
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK-----NKVFSFDLVSNDPSV-------IACDMS---NTP-------L-NSSSVDVAVF 195 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la-----~~v~gvDis~~~~~~-------~~~d~~---~lp-------~-~~~sfD~Vi~ 195 (223)
.++.+||-+|+|. |.++..++ .+|+++|.++....+ ...|.. ... + ....+|+|+-
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid 273 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILE 273 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEE
Confidence 3678999999764 55555444 389999987622111 011211 000 1 1236999996
Q ss_pred cccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+... +..+..+.++|+|+|.+++
T Consensus 274 ~~g~-----~~~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 274 ATGD-----SRALLEGSELLRRGGFYSV 296 (380)
T ss_dssp CSSC-----TTHHHHHHHHEEEEEEEEE
T ss_pred CCCC-----HHHHHHHHHHHhcCCEEEE
Confidence 6542 3467888999999999873
No 349
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=83.65 E-value=0.76 Score=34.09 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=30.6
Q ss_pred CCCCCCceeEEEEccccc-C-C-CHHHHHHHHHHccCCCCEEE
Q 027441 183 TPLNSSSVDVAVFCLSLM-G-I-NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 183 lp~~~~sfD~Vi~~~~l~-~-~-d~~~~l~e~~rvLkpgG~lv 222 (223)
..+++.+||.|+...--. . . -+..++..+.+.|+|||.|.
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~ 95 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLI 95 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEE
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEE
Confidence 345688999998655443 2 3 34799999999999999985
No 350
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=83.48 E-value=1.2 Score=37.88 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=48.8
Q ss_pred CCCeEEEEC-Ccc-hHHHHHhc-----CceEEEecCCCCCcE-------EEccCCC-C-----CCCCCceeEEEEccccc
Q 027441 141 PSLVIADFG-CGD-ARLAKSVK-----NKVFSFDLVSNDPSV-------IACDMSN-T-----PLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 141 ~~~~ILDiG-cG~-G~~a~~la-----~~v~gvDis~~~~~~-------~~~d~~~-l-----p~~~~sfD~Vi~~~~l~ 200 (223)
++.+||=+| +|. |.++..++ .+|+++|.++.+..+ .+.|... + .+....+|+|+.+..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g-- 248 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTH-- 248 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCC--
Confidence 567899998 553 55544443 579999987622111 0111111 0 112357999987654
Q ss_pred CCCHHHHHHHHHHccCCCCEEEc
Q 027441 201 GINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
-+..+..+.++|+|+|.+++
T Consensus 249 ---~~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 249 ---TDKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp ---HHHHHHHHHHHSCTTCEEEE
T ss_pred ---chhhHHHHHHHhcCCCEEEE
Confidence 25688999999999999874
No 351
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=83.21 E-value=0.19 Score=42.93 Aligned_cols=80 Identities=13% Similarity=0.156 Sum_probs=49.0
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCcEE-------EccCCCC-C----CCCCceeEEEEcccccCC
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSNT-P----LNSSSVDVAVFCLSLMGI 202 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~~~-------~~d~~~l-p----~~~~sfD~Vi~~~~l~~~ 202 (223)
.++.+||-+|+|. |.++..++ .+|+++|.++.+..+. ..|.... . +. +.||+|+.+.....
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~g~~~- 255 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCASSLT- 255 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECCSCST-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECCCCCc-
Confidence 4778999999864 55555444 5799999887543221 1121111 0 11 46999997655300
Q ss_pred CHHHHHHHHHHccCCCCEEEc
Q 027441 203 NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 203 d~~~~l~e~~rvLkpgG~lvi 223 (223)
+..+..+.++|+|||.+++
T Consensus 256 --~~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 256 --DIDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp --TCCTTTGGGGEEEEEEEEE
T ss_pred --HHHHHHHHHHhcCCCEEEE
Confidence 1235567789999999863
No 352
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=83.21 E-value=1.4 Score=36.82 Aligned_cols=78 Identities=15% Similarity=0.092 Sum_probs=49.1
Q ss_pred CCCCeEEEECC-c-chHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCC--------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGC-G-DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGc-G-~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp--------~~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|+ | .|..+..++ .+|+++|.++.+..+ ...|..... .....+|+|+.+..
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 218 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVG 218 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCC
Confidence 46789999993 3 355555444 589999987622111 112222211 12246999997766
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. ..+..+.++|+|||.+++
T Consensus 219 ~------~~~~~~~~~l~~~G~iv~ 237 (325)
T 3jyn_A 219 Q------DTWLTSLDSVAPRGLVVS 237 (325)
T ss_dssp G------GGHHHHHTTEEEEEEEEE
T ss_pred h------HHHHHHHHHhcCCCEEEE
Confidence 2 467788999999999874
No 353
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=82.61 E-value=1.5 Score=36.76 Aligned_cols=78 Identities=10% Similarity=0.078 Sum_probs=48.7
Q ss_pred CCCCeEEEECCc--chHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCC--------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG--~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp--------~~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|++ .|..+..++ .+|+++|.++.+..+ ...|..... .....+|+|+.+..
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g 226 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVG 226 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCC
Confidence 477899999953 344444444 589999987622111 112222111 11346999997766
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
- ..+..+.++|+|||.+++
T Consensus 227 ~------~~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 227 K------DTFEISLAALKRKGVFVS 245 (334)
T ss_dssp G------GGHHHHHHHEEEEEEEEE
T ss_pred h------HHHHHHHHHhccCCEEEE
Confidence 2 467788899999999874
No 354
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=82.37 E-value=2.9 Score=34.60 Aligned_cols=74 Identities=12% Similarity=0.055 Sum_probs=47.5
Q ss_pred eEEEECC--cchHHHHHhc----CceEEEecCCCCCcEE-------EccCCC----CCCCCCceeEEEEcccccCCCHHH
Q 027441 144 VIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSN----TPLNSSSVDVAVFCLSLMGINFPN 206 (223)
Q Consensus 144 ~ILDiGc--G~G~~a~~la----~~v~gvDis~~~~~~~-------~~d~~~----lp~~~~sfD~Vi~~~~l~~~d~~~ 206 (223)
.||=+|+ |.|.++..++ .+|++++.++.+..+. ..|..+ ..+....+|+|+-+.. ..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g------~~ 222 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG------DK 222 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC------HH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC------cH
Confidence 4999997 3466665555 5899999887332211 111111 1123457999886654 34
Q ss_pred HHHHHHHccCCCCEEEc
Q 027441 207 YLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 207 ~l~e~~rvLkpgG~lvi 223 (223)
.+..+.++|+|+|.+++
T Consensus 223 ~~~~~~~~l~~~G~iv~ 239 (324)
T 3nx4_A 223 VLAKVLAQMNYGGCVAA 239 (324)
T ss_dssp HHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHhcCCEEEE
Confidence 88999999999999874
No 355
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=82.28 E-value=0.86 Score=38.54 Aligned_cols=19 Identities=47% Similarity=0.751 Sum_probs=16.7
Q ss_pred HHHHHHHHHccCCCCEEEc
Q 027441 205 PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 205 ~~~l~e~~rvLkpgG~lvi 223 (223)
..+|.++.++|+|||.++|
T Consensus 86 ~~~l~~~~rvLk~~G~i~i 104 (319)
T 1eg2_A 86 KRWLAEAERVLSPTGSIAI 104 (319)
T ss_dssp HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEE
Confidence 4788889999999999985
No 356
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=82.14 E-value=1 Score=38.27 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=37.4
Q ss_pred CCeEEEECCcchHHHHHhc----CceEEEecCCCC--------CcEEEccCCCCCCC-CCceeEEEEcc
Q 027441 142 SLVIADFGCGDARLAKSVK----NKVFSFDLVSND--------PSVIACDMSNTPLN-SSSVDVAVFCL 197 (223)
Q Consensus 142 ~~~ILDiGcG~G~~a~~la----~~v~gvDis~~~--------~~~~~~d~~~lp~~-~~sfD~Vi~~~ 197 (223)
..++||+-||.|.++..+. ..|.++|+++.. .....+|+..+... -..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCCBSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCCcCCHHHcCHhhCCCCCEEEECC
Confidence 4789999999999888775 357889998610 01125677654311 12489999663
No 357
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=81.56 E-value=3 Score=35.40 Aligned_cols=78 Identities=14% Similarity=0.112 Sum_probs=49.7
Q ss_pred cCCCCeEEEECC-c-chHHHHHhc----CceEEEecCCCC--------CcEEEccCCCCC-------CCCCceeEEEEcc
Q 027441 139 HSPSLVIADFGC-G-DARLAKSVK----NKVFSFDLVSND--------PSVIACDMSNTP-------LNSSSVDVAVFCL 197 (223)
Q Consensus 139 ~~~~~~ILDiGc-G-~G~~a~~la----~~v~gvDis~~~--------~~~~~~d~~~lp-------~~~~sfD~Vi~~~ 197 (223)
..++.+||-+|+ | .|..+..++ .+|+++|.++.. .+. ..|..... .....+|+|+.+.
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR-PINYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcE-EEecCChhHHHHHHHhcCCCCCEEEECC
Confidence 347789999993 3 466555554 579999987521 111 11221111 0124699999776
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. ...+..+.++|+++|.+++
T Consensus 240 g------~~~~~~~~~~l~~~G~iv~ 259 (362)
T 2c0c_A 240 G------GAMFDLAVDALATKGRLIV 259 (362)
T ss_dssp C------THHHHHHHHHEEEEEEEEE
T ss_pred C------HHHHHHHHHHHhcCCEEEE
Confidence 5 2578889999999999863
No 358
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=81.27 E-value=0.33 Score=40.21 Aligned_cols=78 Identities=12% Similarity=0.062 Sum_probs=48.2
Q ss_pred cCCCCeEEEECC--cchHHHHHhc----CceEEEecCCCCCcEE-------EccCCC-CCCCC--CceeEEEEcccccCC
Q 027441 139 HSPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSN-TPLNS--SSVDVAVFCLSLMGI 202 (223)
Q Consensus 139 ~~~~~~ILDiGc--G~G~~a~~la----~~v~gvDis~~~~~~~-------~~d~~~-lp~~~--~sfD~Vi~~~~l~~~ 202 (223)
..++.+||-+|+ |.|..+..++ .+|+++|.++....+. ..|..+ ..+.. ..+|+|+. ...
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~--- 198 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG--- 198 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC---
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH---
Confidence 347889999998 3455555444 5899999876433221 112111 00000 46999997 432
Q ss_pred CHHHHHHHHHHccCCCCEEEc
Q 027441 203 NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 203 d~~~~l~e~~rvLkpgG~lvi 223 (223)
..+..+.++|+++|.+++
T Consensus 199 ---~~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 199 ---KEVEESLGLLAHGGRLVY 216 (302)
T ss_dssp ---TTHHHHHTTEEEEEEEEE
T ss_pred ---HHHHHHHHhhccCCEEEE
Confidence 357788899999999863
No 359
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=81.26 E-value=2.5 Score=36.43 Aligned_cols=92 Identities=14% Similarity=0.038 Sum_probs=55.7
Q ss_pred HHHHHHHhccCCCCeEEEECCcchHHHHHhc-CceEEEecCC------------CCC---cEEEccCCCCCCCCCceeEE
Q 027441 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-NKVFSFDLVS------------NDP---SVIACDMSNTPLNSSSVDVA 193 (223)
Q Consensus 130 ~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la-~~v~gvDis~------------~~~---~~~~~d~~~lp~~~~sfD~V 193 (223)
+.+++++.....+..||.|+.+.|.++..|+ ..++.+.=|- ..+ .+...+. +.-....||+|
T Consensus 27 ~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~~~~~v 104 (375)
T 4dcm_A 27 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDS--TADYPQQPGVV 104 (375)
T ss_dssp HHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGGCCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TSCCCSSCSEE
T ss_pred HHHHHhhhhccCCCCEEEECCCCCHHHHhhccCCceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--ccccccCCCEE
Confidence 3456665543345789999999999999887 3555552221 000 1111221 11223568998
Q ss_pred EEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+....=+--.....|..+...|.||+.+++
T Consensus 105 ~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~ 134 (375)
T 4dcm_A 105 LIKVPKTLALLEQQLRALRKVVTSDTRIIA 134 (375)
T ss_dssp EEECCSCHHHHHHHHHHHHTTCCTTSEEEE
T ss_pred EEEcCCCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 875542211445788889999999998864
No 360
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=81.14 E-value=1.8 Score=36.35 Aligned_cols=78 Identities=12% Similarity=0.092 Sum_probs=49.4
Q ss_pred CCCCeEEEECC--cchHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCC--------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGc--G~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp--------~~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|+ |.|..+..++ .+|+++|.++....+ ...|..+.. .....+|+|+.+..
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 244 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG 244 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence 36789999998 4566555554 578999887522110 122332211 11246999997765
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|+++|.+++
T Consensus 245 ------~~~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 245 ------ALYFEGVIKATANGGRIAI 263 (343)
T ss_dssp ------SSSHHHHHHHEEEEEEEEE
T ss_pred ------HHHHHHHHHhhccCCEEEE
Confidence 2356778899999998863
No 361
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=80.97 E-value=1.4 Score=37.13 Aligned_cols=46 Identities=17% Similarity=0.326 Sum_probs=33.0
Q ss_pred CCCchHHHHHHHHhccCCCCeEEEECCcchHHHHHhc---CceEEEecCCC
Q 027441 124 WPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN 171 (223)
Q Consensus 124 ~p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~~ 171 (223)
.|...+..++.... .++..|||.-||+|..+.... .+.+|+|+++.
T Consensus 237 kp~~l~~~~i~~~~--~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~ 285 (323)
T 1boo_A 237 FPAKLPEFFIRMLT--EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPE 285 (323)
T ss_dssp CCTHHHHHHHHHHC--CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHH
T ss_pred CCHHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHH
Confidence 34444455554432 478999999999999776654 68999999873
No 362
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=80.62 E-value=1.8 Score=36.03 Aligned_cols=77 Identities=18% Similarity=0.141 Sum_probs=47.8
Q ss_pred CCC-eEEEECC-c-chHHHHHhc----CceEEEecCCCCCc---------EEEc-cC--CC-CCCCCCceeEEEEccccc
Q 027441 141 PSL-VIADFGC-G-DARLAKSVK----NKVFSFDLVSNDPS---------VIAC-DM--SN-TPLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 141 ~~~-~ILDiGc-G-~G~~a~~la----~~v~gvDis~~~~~---------~~~~-d~--~~-lp~~~~sfD~Vi~~~~l~ 200 (223)
++. +||-+|+ | .|.++..++ .+|++++.++.+.. ++.. +. .. ..+....+|+|+.+..
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g-- 226 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG-- 226 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC--
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc--
Confidence 443 7999997 3 355555444 57999998864322 1111 11 11 1122346999987655
Q ss_pred CCCHHHHHHHHHHccCCCCEEEc
Q 027441 201 GINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|++||.+++
T Consensus 227 ----~~~~~~~~~~l~~~G~iv~ 245 (330)
T 1tt7_A 227 ----GKQLASLLSKIQYGGSVAV 245 (330)
T ss_dssp ----THHHHHHHTTEEEEEEEEE
T ss_pred ----HHHHHHHHHhhcCCCEEEE
Confidence 2468889999999999863
No 363
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=80.23 E-value=0.75 Score=38.87 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=47.6
Q ss_pred CCCeEEEEC-Ccc-hHHHHHhc----CceEEEecCCCCCcE-------EEccCCC-C-----CCCCCceeEEEEcccccC
Q 027441 141 PSLVIADFG-CGD-ARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSN-T-----PLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 141 ~~~~ILDiG-cG~-G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~-l-----p~~~~sfD~Vi~~~~l~~ 201 (223)
++.+||=+| +|. |.++..++ .+|+++|.++.+..+ ...|... + ......||+|+.+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g--- 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFN--- 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSC---
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCC---
Confidence 578899994 543 55554444 589999887622111 0111111 0 012346999997654
Q ss_pred CCHHHHHHHHHHccCCCCEEE
Q 027441 202 INFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 202 ~d~~~~l~e~~rvLkpgG~lv 222 (223)
-+..+..+.++|+|+|.++
T Consensus 227 --~~~~~~~~~~~l~~~G~iv 245 (346)
T 3fbg_A 227 --TDMYYDDMIQLVKPRGHIA 245 (346)
T ss_dssp --HHHHHHHHHHHEEEEEEEE
T ss_pred --chHHHHHHHHHhccCCEEE
Confidence 2567889999999999985
No 364
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=80.18 E-value=1.3 Score=36.94 Aligned_cols=77 Identities=17% Similarity=0.094 Sum_probs=46.8
Q ss_pred CCC-eEEEECC--cchHHHHHhc----CceEEEecCCCCCcE-------EEccCCCC------CCCCCceeEEEEccccc
Q 027441 141 PSL-VIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNT------PLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 141 ~~~-~ILDiGc--G~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~l------p~~~~sfD~Vi~~~~l~ 200 (223)
++. +||-+|+ |.|.++..++ .+|++++.++.+..+ ...|..+. .+....+|+|+.+..-
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~- 226 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG- 226 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT-
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH-
Confidence 443 7999997 3455555554 579999988633211 01122111 1223469999876542
Q ss_pred CCCHHHHHHHHHHccCCCCEEEc
Q 027441 201 GINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
..+..+.++|++||.+++
T Consensus 227 -----~~~~~~~~~l~~~G~~v~ 244 (328)
T 1xa0_A 227 -----RTLATVLSRMRYGGAVAV 244 (328)
T ss_dssp -----TTHHHHHHTEEEEEEEEE
T ss_pred -----HHHHHHHHhhccCCEEEE
Confidence 257788899999999863
No 365
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=80.14 E-value=2.5 Score=35.55 Aligned_cols=79 Identities=14% Similarity=0.206 Sum_probs=49.2
Q ss_pred CCCCeEEEECCcchH--HHHHh-----cCceEEEecCCCCCcE-------EEccCCCCC-------CCC-CceeEEEEcc
Q 027441 140 SPSLVIADFGCGDAR--LAKSV-----KNKVFSFDLVSNDPSV-------IACDMSNTP-------LNS-SSVDVAVFCL 197 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~--~a~~l-----a~~v~gvDis~~~~~~-------~~~d~~~lp-------~~~-~sfD~Vi~~~ 197 (223)
.++.+||-+|+|.|. .+..+ -.+|+++|.++....+ ...|..+.. +.. +.+|+|+.+.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 248 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLN 248 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECC
Confidence 477899999998543 33322 2468899987622110 112222211 112 4799999765
Q ss_pred cccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 198 SLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 198 ~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.. +..+..+.++|+|+|.+++
T Consensus 249 g~-----~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 249 NS-----EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp CC-----HHHHTTGGGGEEEEEEEEE
T ss_pred CC-----HHHHHHHHHHHhcCCEEEE
Confidence 52 4578889999999999863
No 366
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=79.88 E-value=2.2 Score=35.45 Aligned_cols=78 Identities=10% Similarity=0.019 Sum_probs=48.5
Q ss_pred CCCCeEEEECCc--chHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCC--------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG--~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp--------~~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|++ .|..+..++ .+|+++|.++..... ...|..+.. .....+|+|+.+..
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g 218 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG 218 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence 467899999943 344444433 579999887521110 122332211 11236999997765
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|++||.+++
T Consensus 219 ------~~~~~~~~~~l~~~G~iv~ 237 (327)
T 1qor_A 219 ------RDTWERSLDCLQRRGLMVS 237 (327)
T ss_dssp ------GGGHHHHHHTEEEEEEEEE
T ss_pred ------hHHHHHHHHHhcCCCEEEE
Confidence 3567888999999999863
No 367
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=79.59 E-value=3.7 Score=35.35 Aligned_cols=80 Identities=13% Similarity=0.064 Sum_probs=46.0
Q ss_pred CCCCeEEEECCcc-hHHHHHhc----C-ceEEEecCCCCCcE-------EEccCCCCC--------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~-G~~a~~la----~-~v~gvDis~~~~~~-------~~~d~~~lp--------~~~~sfD~Vi~~~~ 198 (223)
.++.+||=+|+|. |.++..++ . +|+++|.++.+..+ .+.|..... .....+|+|+-+..
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 4678999999864 44555554 3 79999988632211 111221111 11236999986554
Q ss_pred ccCCCHHHHHHHHHHcc----CCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVL----KPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvL----kpgG~lvi 223 (223)
. ....+..+.++| ++||.+++
T Consensus 292 ~----~~~~~~~~~~~l~~~~~~~G~iv~ 316 (404)
T 3ip1_A 292 V----PQLVWPQIEEVIWRARGINATVAI 316 (404)
T ss_dssp C----HHHHHHHHHHHHHHCSCCCCEEEE
T ss_pred C----cHHHHHHHHHHHHhccCCCcEEEE
Confidence 2 123444454555 99999874
No 368
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=79.32 E-value=5.3 Score=33.35 Aligned_cols=79 Identities=22% Similarity=0.297 Sum_probs=48.0
Q ss_pred CCCCeEEEECCcchH-HHHHhc-----CceEEEecCCCCCcE-------EEccCCCCC--------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGDAR-LAKSVK-----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~-~a~~la-----~~v~gvDis~~~~~~-------~~~d~~~lp--------~~~~sfD~Vi~~~~ 198 (223)
.++.+||=+|+|.+. ++..++ .+|+++|.++.+..+ ...|..+.. .....+|+++.+..
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~ 241 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAV 241 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCS
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEecc
Confidence 478899999998754 332222 589999988732111 111221111 11234676665443
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
- ...+....++|+++|.+++
T Consensus 242 ~-----~~~~~~~~~~l~~~G~~v~ 261 (348)
T 4eez_A 242 A-----RIAFEQAVASLKPMGKMVA 261 (348)
T ss_dssp C-----HHHHHHHHHTEEEEEEEEE
T ss_pred C-----cchhheeheeecCCceEEE
Confidence 2 6788899999999999864
No 369
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=78.30 E-value=3 Score=35.36 Aligned_cols=74 Identities=14% Similarity=0.063 Sum_probs=47.7
Q ss_pred CCeEEEECCcc-hHHHHHhc----CceEEEecCC---CCCcE-------EEccCCCCCCCC------CceeEEEEccccc
Q 027441 142 SLVIADFGCGD-ARLAKSVK----NKVFSFDLVS---NDPSV-------IACDMSNTPLNS------SSVDVAVFCLSLM 200 (223)
Q Consensus 142 ~~~ILDiGcG~-G~~a~~la----~~v~gvDis~---~~~~~-------~~~d~~~lp~~~------~sfD~Vi~~~~l~ 200 (223)
+.+||-+|+|. |..+..++ .+|+++|.++ .+..+ .. | .+ .+.. ..+|+|+.+...
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~~-~~~~~~~~~~~~~d~vid~~g~- 256 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY-N-SS-NGYDKLKDSVGKFDVIIDATGA- 256 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE-E-CT-TCSHHHHHHHCCEEEEEECCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee-c-hH-HHHHHHHHhCCCCCEEEECCCC-
Confidence 78999999843 33333333 5899999876 33221 12 4 33 2211 459999977653
Q ss_pred CCCHHHHH-HHHHHccCCCCEEEc
Q 027441 201 GINFPNYL-QEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~d~~~~l-~e~~rvLkpgG~lvi 223 (223)
+..+ ..+.++|+++|.+++
T Consensus 257 ----~~~~~~~~~~~l~~~G~iv~ 276 (366)
T 2cdc_A 257 ----DVNILGNVIPLLGRNGVLGL 276 (366)
T ss_dssp ----CTHHHHHHGGGEEEEEEEEE
T ss_pred ----hHHHHHHHHHHHhcCCEEEE
Confidence 2356 889999999999873
No 370
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=77.99 E-value=0.65 Score=39.51 Aligned_cols=77 Identities=17% Similarity=0.182 Sum_probs=46.6
Q ss_pred CCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCcEE--------EccCCCC----CCCCCceeEEEEcccccCCC
Q 027441 141 PSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSVI--------ACDMSNT----PLNSSSVDVAVFCLSLMGIN 203 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~~~--------~~d~~~l----p~~~~sfD~Vi~~~~l~~~d 203 (223)
++.+||=+|+|. |.++..++ .+|+++|.++....+. ..|..+. .. .+.+|+|+-+....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~-~~g~D~vid~~g~~--- 255 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSEL-ADSLDYVIDTVPVH--- 255 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHS-TTTEEEEEECCCSC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHh-cCCCCEEEECCCCh---
Confidence 678999999864 44444444 5799999887432211 1111110 01 13599998665421
Q ss_pred HHHHHHHHHHccCCCCEEEc
Q 027441 204 FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lvi 223 (223)
..+..+.++|+|||.+++
T Consensus 256 --~~~~~~~~~l~~~G~iv~ 273 (357)
T 2cf5_A 256 --HALEPYLSLLKLDGKLIL 273 (357)
T ss_dssp --CCSHHHHTTEEEEEEEEE
T ss_pred --HHHHHHHHHhccCCEEEE
Confidence 235667789999999863
No 371
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=77.93 E-value=6.8 Score=32.61 Aligned_cols=79 Identities=14% Similarity=0.165 Sum_probs=48.2
Q ss_pred CCCCeEEEECCcchH-HHHHhc-----CceEEEecCCCCCcE-------EEccCCCCCC--------CCCceeEEEEccc
Q 027441 140 SPSLVIADFGCGDAR-LAKSVK-----NKVFSFDLVSNDPSV-------IACDMSNTPL--------NSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~-~a~~la-----~~v~gvDis~~~~~~-------~~~d~~~lp~--------~~~sfD~Vi~~~~ 198 (223)
.++.+||=+|+|... ++..++ ..++++|.++.+..+ ...|..+... ....+|+|+.+..
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G 238 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAG 238 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECSC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccccccccc
Confidence 477899999997643 444443 346788888632211 1122222111 1245788875543
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
-+..+..+.++|++||.+++
T Consensus 239 -----~~~~~~~~~~~l~~~G~~v~ 258 (346)
T 4a2c_A 239 -----VPQTVELAVEIAGPHAQLAL 258 (346)
T ss_dssp -----SHHHHHHHHHHCCTTCEEEE
T ss_pred -----ccchhhhhhheecCCeEEEE
Confidence 26788899999999999874
No 372
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=77.90 E-value=4.7 Score=33.92 Aligned_cols=78 Identities=10% Similarity=0.048 Sum_probs=49.3
Q ss_pred CCC--CeEEEECCcc--hHHHHHhc----C-ceEEEecCCCCCc--------EEEccCCCCCC-------CCCceeEEEE
Q 027441 140 SPS--LVIADFGCGD--ARLAKSVK----N-KVFSFDLVSNDPS--------VIACDMSNTPL-------NSSSVDVAVF 195 (223)
Q Consensus 140 ~~~--~~ILDiGcG~--G~~a~~la----~-~v~gvDis~~~~~--------~~~~d~~~lp~-------~~~sfD~Vi~ 195 (223)
.++ .+||-.|++. |..+..++ . +|+++|.++.... -...|..+..+ ..+.+|+|+.
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~ 236 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFD 236 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEE
Confidence 467 8999999843 44444333 4 8999998752111 11223322110 1126999998
Q ss_pred cccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 196 CLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 196 ~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+.. ...+..+.++|++||.+++
T Consensus 237 ~~G------~~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 237 NVG------GNISDTVISQMNENSHIIL 258 (357)
T ss_dssp SCC------HHHHHHHHHTEEEEEEEEE
T ss_pred CCC------HHHHHHHHHHhccCcEEEE
Confidence 776 3678899999999999863
No 373
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=77.71 E-value=4.7 Score=35.38 Aligned_cols=78 Identities=9% Similarity=0.062 Sum_probs=49.1
Q ss_pred CCCCeEEEECC-c-chHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCCC---------------------
Q 027441 140 SPSLVIADFGC-G-DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTPL--------------------- 185 (223)
Q Consensus 140 ~~~~~ILDiGc-G-~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp~--------------------- 185 (223)
.++.+||=+|+ | .|.++..++ .+|++++.++.+..+ .+.|.....+
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i 306 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI 306 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence 46789999997 3 355555554 578888866522111 1112211111
Q ss_pred ----CCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 186 ----NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 186 ----~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
....+|+|+-+.. ...+..+.++|++||.+++
T Consensus 307 ~~~t~g~g~Dvvid~~G------~~~~~~~~~~l~~~G~iv~ 342 (456)
T 3krt_A 307 RELTGGEDIDIVFEHPG------RETFGASVFVTRKGGTITT 342 (456)
T ss_dssp HHHHTSCCEEEEEECSC------HHHHHHHHHHEEEEEEEEE
T ss_pred HHHhCCCCCcEEEEcCC------chhHHHHHHHhhCCcEEEE
Confidence 1247999987655 3678889999999999874
No 374
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=76.60 E-value=3 Score=35.20 Aligned_cols=78 Identities=9% Similarity=0.081 Sum_probs=48.0
Q ss_pred CCCCeEEEECC--cchHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCC--------CCCCceeEEEEccc
Q 027441 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGc--G~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp--------~~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|+ |.|..+..++ .+|+++|.++....+ ...|..... .....+|+|+.+..
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G 240 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG 240 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCC
Confidence 46789999985 3454444443 579999987522111 122332211 11246999997765
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. ..+..+.++|++||.+++
T Consensus 241 ~------~~~~~~~~~l~~~G~iv~ 259 (354)
T 2j8z_A 241 G------SYWEKNVNCLALDGRWVL 259 (354)
T ss_dssp G------GGHHHHHHHEEEEEEEEE
T ss_pred c------hHHHHHHHhccCCCEEEE
Confidence 3 257778899999999873
No 375
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=76.27 E-value=2.6 Score=35.56 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=26.4
Q ss_pred CCCCeEEEECCcchHHHHHhc---CceEEEecCC
Q 027441 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS 170 (223)
Q Consensus 140 ~~~~~ILDiGcG~G~~a~~la---~~v~gvDis~ 170 (223)
.++..|||.=||+|..+.... .+.+|+|+++
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~ 274 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAP 274 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESST
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCc
Confidence 478999999999998766654 6899999998
No 376
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=75.91 E-value=0.71 Score=38.98 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=48.0
Q ss_pred CCCeEEEECCcc-hHHHHH----h--cCceEEEecCCCCCcEE-------EccCCC---C--CCC-CCceeEEEEccccc
Q 027441 141 PSLVIADFGCGD-ARLAKS----V--KNKVFSFDLVSNDPSVI-------ACDMSN---T--PLN-SSSVDVAVFCLSLM 200 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~~a~~----l--a~~v~gvDis~~~~~~~-------~~d~~~---l--p~~-~~sfD~Vi~~~~l~ 200 (223)
++.+||-+|+|. |.++.. + -.+|+++|.++.+..+. ..|... . .+. ...||+|+.+...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~- 248 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGT- 248 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCC-
Confidence 788999999974 443333 3 34689999876221110 011100 0 011 2369999976552
Q ss_pred CCCHHHHHHHHHHccCCCCEEEc
Q 027441 201 GINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 201 ~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+..+..+.++|+|||.+++
T Consensus 249 ----~~~~~~~~~~l~~~G~iv~ 267 (344)
T 2h6e_A 249 ----EETTYNLGKLLAQEGAIIL 267 (344)
T ss_dssp ----HHHHHHHHHHEEEEEEEEE
T ss_pred ----hHHHHHHHHHhhcCCEEEE
Confidence 4578899999999999863
No 377
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=75.87 E-value=1.5 Score=37.30 Aligned_cols=54 Identities=13% Similarity=0.168 Sum_probs=38.8
Q ss_pred CeEEEECCcchHHHHHhc--C----ceEEEecCC----------CCCcEEEccCCCCCC---CCCceeEEEEc
Q 027441 143 LVIADFGCGDARLAKSVK--N----KVFSFDLVS----------NDPSVIACDMSNTPL---NSSSVDVAVFC 196 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la--~----~v~gvDis~----------~~~~~~~~d~~~lp~---~~~sfD~Vi~~ 196 (223)
.+++|+-||.|.++..+. + .|.++|+++ ....++.+|+..+.. +...+|+++.+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEec
Confidence 579999999999887774 2 367999987 344566788876642 22358999854
No 378
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=75.05 E-value=1.6 Score=37.72 Aligned_cols=96 Identities=13% Similarity=0.051 Sum_probs=58.6
Q ss_pred CCCchHHHHHHHHhccCCCCeEEEECCcchHHHHHhc--CceEEEecCC--------CCCcEEEccCCCCCCCCCceeEE
Q 027441 124 WPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK--NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVA 193 (223)
Q Consensus 124 ~p~~~~~~i~~~l~~~~~~~~ILDiGcG~G~~a~~la--~~v~gvDis~--------~~~~~~~~d~~~lp~~~~sfD~V 193 (223)
+|....+.+++++... +.+||.++-+-|.++..+. .+|+.+.-|. ....... ..........||+|
T Consensus 30 ~~~~~~~~l~~~~~~~--~~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~d~v 105 (381)
T 3dmg_A 30 YRDPVHDLLQKTVEPF--GERALDLNPGVGWGSLPLEGRMAVERLETSRAAFRCLTASGLQARL--ALPWEAAAGAYDLV 105 (381)
T ss_dssp SSCHHHHHHHTTCCCC--SSEEEESSCTTSTTTGGGBTTBEEEEEECBHHHHHHHHHTTCCCEE--CCGGGSCTTCEEEE
T ss_pred CCChHHHHHHHHHHHh--CCcEEEecCCCCccccccCCCCceEEEeCcHHHHHHHHHcCCCccc--cCCccCCcCCCCEE
Confidence 4443445555555543 4789999999998887776 4566654342 1111111 11111234679999
Q ss_pred EEcccccCC--CHHHHHHHHHHccCCCCEEEc
Q 027441 194 VFCLSLMGI--NFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 194 i~~~~l~~~--d~~~~l~e~~rvLkpgG~lvi 223 (223)
+...-=+-. .....|..+.++|+|||.|++
T Consensus 106 ~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~ 137 (381)
T 3dmg_A 106 VLALPAGRGTAYVQASLVAAARALRMGGRLYL 137 (381)
T ss_dssp EEECCGGGCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEECCcchhHHHHHHHHHHHHHhCCCCCEEEE
Confidence 866553211 235788889999999999875
No 379
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=75.04 E-value=4.2 Score=34.06 Aligned_cols=46 Identities=13% Similarity=0.063 Sum_probs=31.1
Q ss_pred EccCCCCCCCCCceeEEEEcccccCC--------CH----HHHHHHHHHccCCCCEEEc
Q 027441 177 ACDMSNTPLNSSSVDVAVFCLSLMGI--------NF----PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 177 ~~d~~~lp~~~~sfD~Vi~~~~l~~~--------d~----~~~l~e~~rvLkpgG~lvi 223 (223)
.+|+...+ ..+.+|+|++.+.-... |- ..++.-+..+|+|||.|++
T Consensus 195 ~lDfg~p~-~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~ 252 (320)
T 2hwk_A 195 RLDLGIPG-DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVS 252 (320)
T ss_dssp CGGGCSCT-TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEE
T ss_pred ccccCCcc-ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEE
Confidence 55654433 23679999988765432 21 1466777899999999974
No 380
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=73.83 E-value=2.1 Score=36.29 Aligned_cols=55 Identities=15% Similarity=0.262 Sum_probs=39.0
Q ss_pred CCCeEEEECCcchHHHHHhc--C---c-e-EEEecCC----------CCCcEEEccCCCCCC---CCCceeEEEEc
Q 027441 141 PSLVIADFGCGDARLAKSVK--N---K-V-FSFDLVS----------NDPSVIACDMSNTPL---NSSSVDVAVFC 196 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la--~---~-v-~gvDis~----------~~~~~~~~d~~~lp~---~~~sfD~Vi~~ 196 (223)
...+++|+-||.|.++..+. + + | .++|+++ ... ++.+|+..+.. +...+|+++.+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEec
Confidence 34689999999999887775 2 3 5 6999997 222 56788877642 22358999965
No 381
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=73.39 E-value=0.87 Score=38.63 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=48.0
Q ss_pred CCCCeEEEECC-c-chHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCCC-------CCCceeEEEEcccc
Q 027441 140 SPSLVIADFGC-G-DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTPL-------NSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGc-G-~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp~-------~~~sfD~Vi~~~~l 199 (223)
.++.+||-+|+ | .|..+..++ .+|+++|.++....+ ...|.....+ ....+|+|+.+..-
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 245 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA 245 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH
Confidence 46789999953 3 355554444 589999987622111 1122221111 03469999977662
Q ss_pred cCCCHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
..+..+.++|+++|.+++
T Consensus 246 ------~~~~~~~~~l~~~G~iv~ 263 (353)
T 4dup_A 246 ------AYFERNIASLAKDGCLSI 263 (353)
T ss_dssp ------GGHHHHHHTEEEEEEEEE
T ss_pred ------HHHHHHHHHhccCCEEEE
Confidence 367788899999999864
No 382
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=71.38 E-value=21 Score=28.33 Aligned_cols=56 Identities=7% Similarity=0.010 Sum_probs=41.2
Q ss_pred CeEEEECCcchHHHHHhc-------CceEEEecCC--------CCCcEEEccCCCCCCCCCceeEEEEcccccCC
Q 027441 143 LVIADFGCGDARLAKSVK-------NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI 202 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la-------~~v~gvDis~--------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~ 202 (223)
.+||=.|| |.++..+. .+|++++-++ ..+.++.+|+.++. -..+|+|+.+......
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~~~ 76 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPDSG 76 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCBTT
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcccc
Confidence 57999995 66655554 3688888775 45678889998866 4568999988776544
No 383
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=71.13 E-value=4.6 Score=33.61 Aligned_cols=54 Identities=11% Similarity=0.109 Sum_probs=38.3
Q ss_pred CeEEEECCcchHHHHHhc----CceEEEecCCC---------CCcEEEccCCCCCCC-CCceeEEEEc
Q 027441 143 LVIADFGCGDARLAKSVK----NKVFSFDLVSN---------DPSVIACDMSNTPLN-SSSVDVAVFC 196 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la----~~v~gvDis~~---------~~~~~~~d~~~lp~~-~~sfD~Vi~~ 196 (223)
.+|||+=||.|.++..|. .-|.++|+++. ...++.+|+..+... -..+|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEec
Confidence 369999999999877775 35779999972 335677888766421 1357998854
No 384
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=69.56 E-value=5 Score=33.38 Aligned_cols=78 Identities=17% Similarity=0.185 Sum_probs=48.8
Q ss_pred CCCCeEEEECC--cchHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCCC--------CCCceeEEEEccc
Q 027441 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTPL--------NSSSVDVAVFCLS 198 (223)
Q Consensus 140 ~~~~~ILDiGc--G~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp~--------~~~sfD~Vi~~~~ 198 (223)
.++.+||-+|+ |.|..+..++ .+|+++|.++..... ...|..+..+ ....+|+|+.+..
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g 223 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIG 223 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCc
Confidence 46789999996 4455544443 578999887621110 1223322111 1236999997765
Q ss_pred ccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 199 LMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 199 l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
. ..+..+.++|++||.+++
T Consensus 224 ~------~~~~~~~~~l~~~G~iv~ 242 (333)
T 1wly_A 224 K------DTLQKSLDCLRPRGMCAA 242 (333)
T ss_dssp T------TTHHHHHHTEEEEEEEEE
T ss_pred H------HHHHHHHHhhccCCEEEE
Confidence 2 457788899999999863
No 385
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=69.17 E-value=10 Score=32.96 Aligned_cols=78 Identities=8% Similarity=0.026 Sum_probs=47.2
Q ss_pred CCCCeEEEECC-c-chHHHHHhc----CceEEEecCCCCCcEE-------EccCCCCCC---------------------
Q 027441 140 SPSLVIADFGC-G-DARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSNTPL--------------------- 185 (223)
Q Consensus 140 ~~~~~ILDiGc-G-~G~~a~~la----~~v~gvDis~~~~~~~-------~~d~~~lp~--------------------- 185 (223)
.++.+||=+|+ | .|.++..++ .+|++++.++....+. ..|.....+
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 47789999997 3 344554444 5788888765221110 011100000
Q ss_pred ----CCCceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 186 ----NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 186 ----~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
....+|+|+.+.. ...+..+.++|++||.+++
T Consensus 299 v~~~~g~g~Dvvid~~G------~~~~~~~~~~l~~~G~iv~ 334 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTG------RVTFGLSVIVARRGGTVVT 334 (447)
T ss_dssp HHHHHSSCCSEEEECSC------HHHHHHHHHHSCTTCEEEE
T ss_pred HHHHhCCCceEEEECCC------chHHHHHHHHHhcCCEEEE
Confidence 0235899987665 3467888899999999874
No 386
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=68.06 E-value=2.8 Score=35.01 Aligned_cols=56 Identities=9% Similarity=0.024 Sum_probs=40.1
Q ss_pred CCCeEEEECCcchHHHHHhc----Cc--eEEEecCC----------CCCcEEEccCCCCCCC----CCceeEEEEc
Q 027441 141 PSLVIADFGCGDARLAKSVK----NK--VFSFDLVS----------NDPSVIACDMSNTPLN----SSSVDVAVFC 196 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la----~~--v~gvDis~----------~~~~~~~~d~~~lp~~----~~sfD~Vi~~ 196 (223)
...++||+=||.|.++..+. .. |.++|+++ ....+..+|+..+... ...+|+++..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 45789999999999887665 22 58999986 2334678888776421 1368999965
No 387
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=66.53 E-value=7.2 Score=32.24 Aligned_cols=77 Identities=16% Similarity=0.125 Sum_probs=45.4
Q ss_pred CCCCeEEEEC-Ccc-hHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCC-C--CCCceeEEEEcccccCCC
Q 027441 140 SPSLVIADFG-CGD-ARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP-L--NSSSVDVAVFCLSLMGIN 203 (223)
Q Consensus 140 ~~~~~ILDiG-cG~-G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp-~--~~~sfD~Vi~~~~l~~~d 203 (223)
.++.+||=+| +|. |.++..++ .+|++++ ++.+..+ ...|..... + .-..+|+|+-+..
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g----- 224 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVG----- 224 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSC-----
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCC-----
Confidence 4788999997 554 55555554 5788776 3311111 011221111 1 0146999997655
Q ss_pred HHHHHHHHHHccCCCCEEEc
Q 027441 204 FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|+++|.+++
T Consensus 225 -~~~~~~~~~~l~~~G~iv~ 243 (321)
T 3tqh_A 225 -GDVGIQSIDCLKETGCIVS 243 (321)
T ss_dssp -HHHHHHHGGGEEEEEEEEE
T ss_pred -cHHHHHHHHhccCCCEEEE
Confidence 3334889999999999873
No 388
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=66.37 E-value=4.5 Score=33.96 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=46.9
Q ss_pred CCCCeEEEECC-c-chHHHHHhc----CceEEEecCCCC--------CcEEEccCCCCC------CCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGC-G-DARLAKSVK----NKVFSFDLVSND--------PSVIACDMSNTP------LNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGc-G-~G~~a~~la----~~v~gvDis~~~--------~~~~~~d~~~lp------~~~~sfD~Vi~~~~l 199 (223)
.++.+||-+|+ | .|.++..++ .+|+++ .++.+ .+.+. +..++. .....+|+|+.+..
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g- 225 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDLVYDTLG- 225 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSC-
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceEEEECCC-
Confidence 46789999995 3 355555554 578888 55421 12211 111110 11246999997665
Q ss_pred cCCCHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|+++|.+++
T Consensus 226 -----~~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 226 -----GPVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp -----THHHHHHHHHEEEEEEEEE
T ss_pred -----cHHHHHHHHHHhcCCeEEE
Confidence 3578888999999999873
No 389
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=66.09 E-value=1.6 Score=37.19 Aligned_cols=77 Identities=17% Similarity=0.145 Sum_probs=45.9
Q ss_pred CCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCcE--------EEccCCCC----CCCCCceeEEEEcccccCCC
Q 027441 141 PSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSV--------IACDMSNT----PLNSSSVDVAVFCLSLMGIN 203 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~~--------~~~d~~~l----p~~~~sfD~Vi~~~~l~~~d 203 (223)
++.+||=+|+|. |.++..++ .+|+++|.++..... ...|..+. .+ .+.+|+|+.+....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~-~~~~D~vid~~g~~--- 262 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAA-AGTLDGIIDTVSAV--- 262 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHT-TTCEEEEEECCSSC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHh-hCCCCEEEECCCcH---
Confidence 678899999864 44444444 578999987633211 11122110 01 13699999765432
Q ss_pred HHHHHHHHHHccCCCCEEEc
Q 027441 204 FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lvi 223 (223)
..+..+.++|+++|.+++
T Consensus 263 --~~~~~~~~~l~~~G~iv~ 280 (366)
T 1yqd_A 263 --HPLLPLFGLLKSHGKLIL 280 (366)
T ss_dssp --CCSHHHHHHEEEEEEEEE
T ss_pred --HHHHHHHHHHhcCCEEEE
Confidence 134567788999998863
No 390
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=65.58 E-value=17 Score=30.78 Aligned_cols=78 Identities=9% Similarity=0.078 Sum_probs=47.4
Q ss_pred CCCCeEEEECCc--chHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCC-------CCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP-------LNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG--~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp-------~~~~sfD~Vi~~~~l 199 (223)
.++.+||=+|++ .|.++..++ .+|+++. ++.+..+ .+.|..... +..+.+|+|+-+-.-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc
Confidence 367899999984 466666555 5777774 5532221 111221111 112449999865542
Q ss_pred cCCCHHHHHHHHHHcc-CCCCEEEc
Q 027441 200 MGINFPNYLQEAQRVL-KPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvL-kpgG~lvi 223 (223)
+..+..+.+.| ++||.+++
T Consensus 242 -----~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 242 -----VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp -----HHHHHHHHHHSCTTCEEEEE
T ss_pred -----hHHHHHHHHHhhcCCCEEEE
Confidence 56788888899 69999873
No 391
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=64.84 E-value=13 Score=36.58 Aligned_cols=79 Identities=19% Similarity=0.253 Sum_probs=56.8
Q ss_pred CCCeEEEECCcchH-HHHHhc--CceEEEecCC---------CCCcEEEccCCCCCC-CCCceeEEEEccccc------C
Q 027441 141 PSLVIADFGCGDAR-LAKSVK--NKVFSFDLVS---------NDPSVIACDMSNTPL-NSSSVDVAVFCLSLM------G 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~-~a~~la--~~v~gvDis~---------~~~~~~~~d~~~lp~-~~~sfD~Vi~~~~l~------~ 201 (223)
....+||+|.|+-. ....+. ..|+.+|+=| ....|+..|.....+ ....+|+|.|.++|- .
T Consensus 821 ~~~~~lDlGTGPE~RiLsLiP~~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~i~SLGAA~A~a~ 900 (1289)
T 1ej6_A 821 DGDVVLDLGTGPEAKILELIPATSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWITGVRGDIVTCMLSLGAAAAGKS 900 (1289)
T ss_dssp TTCCEEEESCCSSCGGGGTSCTTSCEEEEESSCCCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEEEECSCHHHHHHHHT
T ss_pred ccceEEEccCCCcceeeeecCCCCceEEecccCchhhhccccccceeeEccccccceeecCCCcEEEEEeechhhhhccC
Confidence 56889999999854 333333 4789999876 345678888754332 235689999998875 3
Q ss_pred CCHHHHHHHHHHccCCCC
Q 027441 202 INFPNYLQEAQRVLKPRG 219 (223)
Q Consensus 202 ~d~~~~l~e~~rvLkpgG 219 (223)
++....++.+.+++.+.|
T Consensus 901 ~tl~~~~~q~l~~~~~~~ 918 (1289)
T 1ej6_A 901 MTFDAAFQQLIKVLSKST 918 (1289)
T ss_dssp CCHHHHHHHHHHHHHTSC
T ss_pred CcHHHHHHHHHHHHHhcC
Confidence 477788888888887766
No 392
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=64.20 E-value=4.6 Score=33.92 Aligned_cols=75 Identities=5% Similarity=-0.006 Sum_probs=43.2
Q ss_pred CeEEEE-CCc-chHHHHHhc----CceEEEecCCCCCcEE-------EccCCCCCCC--------CCceeEEEEcccccC
Q 027441 143 LVIADF-GCG-DARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSNTPLN--------SSSVDVAVFCLSLMG 201 (223)
Q Consensus 143 ~~ILDi-GcG-~G~~a~~la----~~v~gvDis~~~~~~~-------~~d~~~lp~~--------~~sfD~Vi~~~~l~~ 201 (223)
.+||=. |+| .|.++..++ .+|+++|.++.+..+. ..|.....+. ...+|+|+.+..
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g--- 242 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVT--- 242 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSC---
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCC---
Confidence 456544 333 244444443 5899999877433221 1222221111 135899997665
Q ss_pred CCHHHHHHHHHHccCCCCEEEc
Q 027441 202 INFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+..+.++|+++|.+++
T Consensus 243 ---~~~~~~~~~~l~~~G~iv~ 261 (349)
T 3pi7_A 243 ---GPLASAIFNAMPKRARWII 261 (349)
T ss_dssp ---HHHHHHHHHHSCTTCEEEE
T ss_pred ---ChhHHHHHhhhcCCCEEEE
Confidence 3345788899999999874
No 393
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=60.43 E-value=13 Score=32.84 Aligned_cols=29 Identities=24% Similarity=0.447 Sum_probs=23.7
Q ss_pred CCeEEEECCcchHHHHHhc----------CceEEEecCC
Q 027441 142 SLVIADFGCGDARLAKSVK----------NKVFSFDLVS 170 (223)
Q Consensus 142 ~~~ILDiGcG~G~~a~~la----------~~v~gvDis~ 170 (223)
...|+|+|.|+|.++..+. .+++.|++|+
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp 176 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSG 176 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTS
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCH
Confidence 4789999999999776553 2688999987
No 394
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=60.36 E-value=69 Score=26.91 Aligned_cols=91 Identities=20% Similarity=0.219 Sum_probs=55.4
Q ss_pred HHHHHHhccCCCCeEEEECCcchHHHHHhc------CceEEEecCC----------------------------------
Q 027441 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------------------------- 170 (223)
Q Consensus 131 ~i~~~l~~~~~~~~ILDiGcG~G~~a~~la------~~v~gvDis~---------------------------------- 170 (223)
.+.+++...++...|+-||||-=.....|. ..++-+|.-.
T Consensus 80 ~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~ 159 (334)
T 3iei_A 80 LIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHI 159 (334)
T ss_dssp HHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTE
T ss_pred HHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhccccccccccccccc
Confidence 344455544356789999999755544443 1233444321
Q ss_pred ---CCCcEEEccCCCC----------CCCCCceeEEEEcccccCCCHH---HHHHHHHHccCCCCEEE
Q 027441 171 ---NDPSVIACDMSNT----------PLNSSSVDVAVFCLSLMGINFP---NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 171 ---~~~~~~~~d~~~l----------p~~~~sfD~Vi~~~~l~~~d~~---~~l~e~~rvLkpgG~lv 222 (223)
.+..++.+|+.+. .+....--++++-.+++++++. .+|..+.... |+|.++
T Consensus 160 l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i 226 (334)
T 3iei_A 160 LDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFI 226 (334)
T ss_dssp EECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred CCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEE
Confidence 2334667787652 2445566789999999999655 6676666665 445443
No 395
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=59.15 E-value=9.6 Score=33.29 Aligned_cols=82 Identities=18% Similarity=0.137 Sum_probs=46.5
Q ss_pred CCCeEEEECCcchH-HHHHhc----CceEEEecCCCC--------CcEEEccCC---C---CC-CC----C---------
Q 027441 141 PSLVIADFGCGDAR-LAKSVK----NKVFSFDLVSND--------PSVIACDMS---N---TP-LN----S--------- 187 (223)
Q Consensus 141 ~~~~ILDiGcG~G~-~a~~la----~~v~gvDis~~~--------~~~~~~d~~---~---lp-~~----~--------- 187 (223)
++.+|+=+|+|.-. .+..++ .+|+++|.++.. ..++..++. + .. +. +
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~ 268 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAAL 268 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhH
Confidence 56899999999643 222222 689999999742 122211110 0 00 00 0
Q ss_pred -----CceeEEEEcccccCC-CHHHHHHHHHHccCCCCEEE
Q 027441 188 -----SSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 188 -----~sfD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lv 222 (223)
...|+||.+..+-.- .+.-+-+++.+.+|||.+++
T Consensus 269 l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIV 309 (405)
T 4dio_A 269 VAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVV 309 (405)
T ss_dssp HHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEE
T ss_pred HHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEE
Confidence 357999976433321 22234468889999999876
No 396
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=56.12 E-value=5.2 Score=34.39 Aligned_cols=31 Identities=26% Similarity=0.314 Sum_probs=21.7
Q ss_pred CCCeEEEECCcchH-HHHHhc----CceEEEecCCC
Q 027441 141 PSLVIADFGCGDAR-LAKSVK----NKVFSFDLVSN 171 (223)
Q Consensus 141 ~~~~ILDiGcG~G~-~a~~la----~~v~gvDis~~ 171 (223)
++.+|+=+|+|.-. .+..++ .+|+++|.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57899999998643 222222 57999999874
No 397
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=55.45 E-value=54 Score=27.28 Aligned_cols=29 Identities=21% Similarity=0.209 Sum_probs=20.9
Q ss_pred ceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
.+|+|+-+-. ...+.++.++|+|||.+++
T Consensus 240 ~~Dvvid~~g------~~~~~~~~~~l~~~G~iv~ 268 (357)
T 1zsy_A 240 QPRLALNCVG------GKSSTELLRQLARGGTMVT 268 (357)
T ss_dssp CCSEEEESSC------HHHHHHHHTTSCTTCEEEE
T ss_pred CceEEEECCC------cHHHHHHHHhhCCCCEEEE
Confidence 4899886654 2233567899999999873
No 398
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=55.38 E-value=7.2 Score=34.90 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=31.4
Q ss_pred CCeEEEECCcchHHHHHhc----CceEEEecCC-------------CCCcEEEccCCCC
Q 027441 142 SLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------NDPSVIACDMSNT 183 (223)
Q Consensus 142 ~~~ILDiGcG~G~~a~~la----~~v~gvDis~-------------~~~~~~~~d~~~l 183 (223)
..+++|+=||.|.++..|. ..|.++|+++ +...++.+|+..+
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhh
Confidence 3689999999999888775 3478999986 1335667787554
No 399
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=54.49 E-value=82 Score=26.63 Aligned_cols=76 Identities=9% Similarity=0.091 Sum_probs=43.5
Q ss_pred CCCeEEEECCcchHHHH--Hhc---Cc-eEEEecCCCC---------CcEEEccCCCCCCCCCceeEEEEcccccCCCHH
Q 027441 141 PSLVIADFGCGDARLAK--SVK---NK-VFSFDLVSND---------PSVIACDMSNTPLNSSSVDVAVFCLSLMGINFP 205 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~--~la---~~-v~gvDis~~~---------~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~ 205 (223)
.+.+|+-.|+|....+. ++. .. ...+|.++.. +.++.-+ . +.....|.|+.... . -..
T Consensus 318 ~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~p~--~--~~~~~~d~vl~~~~-~--~~~ 390 (416)
T 4e2x_A 318 EGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRPAS--A--FSDPYPDYALLFAW-N--HAE 390 (416)
T ss_dssp TTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEEGG--G--CCSSCCSEEEESCG-G--GHH
T ss_pred cCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCCHH--H--HhhcCCCEEEEecc-h--hHH
Confidence 46789999998754333 232 12 3357887721 2222222 1 22355687664322 1 245
Q ss_pred HHHHHHHHccCCCCEEEc
Q 027441 206 NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 206 ~~l~e~~rvLkpgG~lvi 223 (223)
.++..+...+..||.|++
T Consensus 391 ei~~~~~~~~~~g~~~~~ 408 (416)
T 4e2x_A 391 EIMAKEQEFHQAGGRWIL 408 (416)
T ss_dssp HHHHHCHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhcCCEEEE
Confidence 677777777888999985
No 400
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=54.01 E-value=11 Score=35.79 Aligned_cols=77 Identities=14% Similarity=0.159 Sum_probs=48.1
Q ss_pred CCCCeEEEECC--cchHHHHHhc----CceEEEecCCCCCcEE------EccCCCCCC--------CCCceeEEEEcccc
Q 027441 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSVI------ACDMSNTPL--------NSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGc--G~G~~a~~la----~~v~gvDis~~~~~~~------~~d~~~lp~--------~~~sfD~Vi~~~~l 199 (223)
.++.+||=.|+ |.|..+..++ .+|++++.++ ...+. ..|.....+ ....+|+|+-+..
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g- 421 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLA- 421 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCC-
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-HhhhhhcChhheeecCChhHHHHHHHHcCCCCeEEEEECCC-
Confidence 46789999995 3466666555 5788887554 21111 111111111 1246999998655
Q ss_pred cCCCHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
...+....++|+|+|.|+.
T Consensus 422 -----g~~~~~~l~~l~~~Gr~v~ 440 (795)
T 3slk_A 422 -----GEFADASLRMLPRGGRFLE 440 (795)
T ss_dssp -----TTTTHHHHTSCTTCEEEEE
T ss_pred -----cHHHHHHHHHhcCCCEEEE
Confidence 2456788999999999873
No 401
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=53.40 E-value=25 Score=24.98 Aligned_cols=78 Identities=9% Similarity=0.020 Sum_probs=46.4
Q ss_pred CeEEEECCcc-hH-HHHHhc---CceEEEecCC--------CCCcEEEccCCCCC----CCCCceeEEEEcccccCCCHH
Q 027441 143 LVIADFGCGD-AR-LAKSVK---NKVFSFDLVS--------NDPSVIACDMSNTP----LNSSSVDVAVFCLSLMGINFP 205 (223)
Q Consensus 143 ~~ILDiGcG~-G~-~a~~la---~~v~gvDis~--------~~~~~~~~d~~~lp----~~~~sfD~Vi~~~~l~~~d~~ 205 (223)
.+|+=+|||. |. ++..|. ..|+++|.++ ..+.++.+|..+.. ..-..+|+|+++..-.. ..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~--~n 85 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY--EA 85 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH--HH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH--HH
Confidence 5788999976 33 333443 4799999987 34567778875532 12246788886654211 11
Q ss_pred HHHHHHHHccCCCCEEE
Q 027441 206 NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 206 ~~l~e~~rvLkpgG~lv 222 (223)
..+....+.+.|+..++
T Consensus 86 ~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 86 GEIVASARAKNPDIEII 102 (140)
T ss_dssp HHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHHCCCCeEE
Confidence 23344556667776654
No 402
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=52.75 E-value=13 Score=36.77 Aligned_cols=80 Identities=16% Similarity=0.199 Sum_probs=57.9
Q ss_pred CCCeEEEECCcchH-HHHHhc--CceEEEecCC---------CC-CcEEEccCCCCCC-CCCceeEEEEccccc------
Q 027441 141 PSLVIADFGCGDAR-LAKSVK--NKVFSFDLVS---------ND-PSVIACDMSNTPL-NSSSVDVAVFCLSLM------ 200 (223)
Q Consensus 141 ~~~~ILDiGcG~G~-~a~~la--~~v~gvDis~---------~~-~~~~~~d~~~lp~-~~~sfD~Vi~~~~l~------ 200 (223)
.+..+||+|.|+-. ....+. ..|+-+|+=| .. ..|++.|.....+ ....+|++.|.++|-
T Consensus 827 ~~~~~lDLGTGPEcRiLsliP~~~pvtmvD~RP~ae~~~~w~~~~T~yi~~DYl~~~~~~~~~~d~vtailSLGAA~a~a 906 (1299)
T 3iyl_W 827 NLAHLLDLGTGPECRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYSTAAFWNGIRCDSATAIFTIGAAAAAA 906 (1299)
T ss_dssp GGCSEEEETCCSSCSGGGSSCTTSCEEEEESSCCSSCGGGBCTTTEEEEESCSSSGGGGSSCCCSEEEETTTHHHHHHHT
T ss_pred CCCEEEEcCCCccceeeecCCCCCceEEEecCCccccccccccccceeEEeccccceeEecCCCCEEEEeeechhhhhhC
Confidence 34889999999853 333333 4688999876 23 5688888755432 346789999998774
Q ss_pred CCCHHHHHHHHHHccCCCCE
Q 027441 201 GINFPNYLQEAQRVLKPRGE 220 (223)
Q Consensus 201 ~~d~~~~l~e~~rvLkpgG~ 220 (223)
+++....++.+.+.+++.|.
T Consensus 907 ~~tl~~~l~~~l~~~~~~~v 926 (1299)
T 3iyl_W 907 GTDLIAFVQQLIPRIVAAGG 926 (1299)
T ss_dssp TCCHHHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHHHHhcCc
Confidence 56888888888888887764
No 403
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=52.11 E-value=7.9 Score=32.82 Aligned_cols=79 Identities=9% Similarity=-0.036 Sum_probs=45.7
Q ss_pred CCCCeEEEEC-Cc-chHHHHHhc----CceEEEecCCCCCcE-------EEccCCCCCC-----CCCceeEEEEcccccC
Q 027441 140 SPSLVIADFG-CG-DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTPL-----NSSSVDVAVFCLSLMG 201 (223)
Q Consensus 140 ~~~~~ILDiG-cG-~G~~a~~la----~~v~gvDis~~~~~~-------~~~d~~~lp~-----~~~sfD~Vi~~~~l~~ 201 (223)
.++.+||=+| +| .|.++..++ .+|++++ ++.+..+ ...|.....+ ....+|+|+.+...
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~-- 258 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG-- 258 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCT--
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCC--
Confidence 3678999999 34 355555544 5788887 5422111 1112211110 11358999866542
Q ss_pred CCHHHHHHHHHHccCCCCEEEc
Q 027441 202 INFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 202 ~d~~~~l~e~~rvLkpgG~lvi 223 (223)
....+....++|++||.+++
T Consensus 259 --~~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 259 --STETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp --THHHHGGGGBCSSSCCEEEE
T ss_pred --hhhhhHHHHHhhcCCcEEEE
Confidence 12456778889999999873
No 404
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=49.75 E-value=23 Score=24.99 Aligned_cols=56 Identities=16% Similarity=0.215 Sum_probs=35.3
Q ss_pred CeEEEECCcc-hH-HHHHhc---CceEEEecCC--------CCCcEEEccCCCCC----CCCCceeEEEEccc
Q 027441 143 LVIADFGCGD-AR-LAKSVK---NKVFSFDLVS--------NDPSVIACDMSNTP----LNSSSVDVAVFCLS 198 (223)
Q Consensus 143 ~~ILDiGcG~-G~-~a~~la---~~v~gvDis~--------~~~~~~~~d~~~lp----~~~~sfD~Vi~~~~ 198 (223)
.+|+=+|||. |. ++..|. ..|+++|.++ ....++.+|..+.. ..-..+|+|+.+..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 5688999975 22 333333 4799999886 34566778876532 12246888887654
No 405
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=49.43 E-value=54 Score=25.40 Aligned_cols=59 Identities=12% Similarity=0.183 Sum_probs=38.7
Q ss_pred CCeEEEECCcchH---HHHHhcC----ceEEEecCCC----CCcEEEccCCCCC--------CCCCceeEEEEccccc
Q 027441 142 SLVIADFGCGDAR---LAKSVKN----KVFSFDLVSN----DPSVIACDMSNTP--------LNSSSVDVAVFCLSLM 200 (223)
Q Consensus 142 ~~~ILDiGcG~G~---~a~~la~----~v~gvDis~~----~~~~~~~d~~~lp--------~~~~sfD~Vi~~~~l~ 200 (223)
..+||=.|++.|. ++..|+. .|+.+|.++. .+.++.+|+.+.. +.....|++|.+..+.
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~ 81 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGIL 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCC
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccC
Confidence 4578889988775 4444542 5777777653 4567788886521 2235799999877664
No 406
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=49.24 E-value=12 Score=33.60 Aligned_cols=74 Identities=14% Similarity=0.109 Sum_probs=43.5
Q ss_pred CCCeEEEECCcc-hHHH-HHhc---CceEEEecCCCCCc------EEEccCCCCCCCCCceeEEEEcccccCC-CHHHHH
Q 027441 141 PSLVIADFGCGD-ARLA-KSVK---NKVFSFDLVSNDPS------VIACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYL 208 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~~a-~~la---~~v~gvDis~~~~~------~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d~~~~l 208 (223)
.+.+|+=+|+|. |... ..+. .+|+++|.++.... +...++..+ -..+|+|+.+..-.++ +
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~---l~~aDvVi~atgt~~~i~----- 344 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEA---IGDADIVVTATGNKDIIM----- 344 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHH---GGGCSEEEECSSSSCSBC-----
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHH---HhCCCEEEECCCCHHHHH-----
Confidence 678999999976 3222 2222 58999998863211 111121111 1357999877543332 2
Q ss_pred HHHHHccCCCCEEE
Q 027441 209 QEAQRVLKPRGEEQ 222 (223)
Q Consensus 209 ~e~~rvLkpgG~lv 222 (223)
.+..+.|+|||+|+
T Consensus 345 ~~~l~~mk~ggilv 358 (494)
T 3ce6_A 345 LEHIKAMKDHAILG 358 (494)
T ss_dssp HHHHHHSCTTCEEE
T ss_pred HHHHHhcCCCcEEE
Confidence 25566789999986
No 407
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=48.47 E-value=8.3 Score=33.42 Aligned_cols=82 Identities=13% Similarity=0.106 Sum_probs=46.1
Q ss_pred CCCeEEEECCcchH-HHHHhc----CceEEEecCCCC--------CcEEEccC--CCC-----------------CCC--
Q 027441 141 PSLVIADFGCGDAR-LAKSVK----NKVFSFDLVSND--------PSVIACDM--SNT-----------------PLN-- 186 (223)
Q Consensus 141 ~~~~ILDiGcG~G~-~a~~la----~~v~gvDis~~~--------~~~~~~d~--~~l-----------------p~~-- 186 (223)
++.+|+=+|+|.-. .+..++ .+|+++|.++.. ..++..+. ... .+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~ 262 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDA 262 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHH
Confidence 56899999999633 322222 689999998732 12221110 000 000
Q ss_pred CCceeEEEEcccccCC-CHHHHHHHHHHccCCCCEEE
Q 027441 187 SSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 187 ~~sfD~Vi~~~~l~~~-d~~~~l~e~~rvLkpgG~lv 222 (223)
-..+|+||.+..+-.- .+..+-.++.+.++||++++
T Consensus 263 l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIV 299 (381)
T 3p2y_A 263 ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVV 299 (381)
T ss_dssp HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEE
T ss_pred HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEE
Confidence 1468999976432221 11223478888999998876
No 408
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=47.95 E-value=8.3 Score=31.98 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=25.9
Q ss_pred CCceeEEEEcccc----cCC-CHH-------HHHHHHHHccCCCCEEEc
Q 027441 187 SSSVDVAVFCLSL----MGI-NFP-------NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 187 ~~sfD~Vi~~~~l----~~~-d~~-------~~l~e~~rvLkpgG~lvi 223 (223)
-+.||+|++..-- ||. .++ .+-....+.|+|||.+++
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~ 257 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLI 257 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEE
Confidence 4799999977543 333 222 455667789999999974
No 409
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=47.85 E-value=19 Score=28.49 Aligned_cols=82 Identities=7% Similarity=0.076 Sum_probs=51.2
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC-----------CCCcEEEccCCCCCC----------CCCceeEE
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS-----------NDPSVIACDMSNTPL----------NSSSVDVA 193 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~-----------~~~~~~~~d~~~lp~----------~~~sfD~V 193 (223)
.+.++|=.|++.|. ++..|+ .+|+.+|.++ ..+.++.+|+.+..- ..+.+|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46789999988775 344444 4788888765 245677888866421 01468999
Q ss_pred EEcccccCC------C---HH-----------HHHHHHHHccCCCCEEE
Q 027441 194 VFCLSLMGI------N---FP-----------NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 194 i~~~~l~~~------d---~~-----------~~l~e~~rvLkpgG~lv 222 (223)
+.+..+... + +. .+++.+.+.++.+|.++
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv 135 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIV 135 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEE
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEE
Confidence 987655432 1 11 34555666666777765
No 410
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.65 E-value=39 Score=26.85 Aligned_cols=82 Identities=16% Similarity=0.193 Sum_probs=51.5
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC--------------------------CCCcEEEccCCCCCC---
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS--------------------------NDPSVIACDMSNTPL--- 185 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~--------------------------~~~~~~~~d~~~lp~--- 185 (223)
.+.+||=.|++.|. ++..|+ .+|+.+|.+. ..+.++.+|+.+..-
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 45789999987775 344444 4788888761 245677788866320
Q ss_pred --C-----CCceeEEEEcccccC----C---CHH-----------HHHHHHHHccCCCCEEE
Q 027441 186 --N-----SSSVDVAVFCLSLMG----I---NFP-----------NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 186 --~-----~~sfD~Vi~~~~l~~----~---d~~-----------~~l~e~~rvLkpgG~lv 222 (223)
. .+.+|++|.+..+.. + ++. .++..+.+.|+.+|.++
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 150 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASII 150 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEE
Confidence 0 136899998766543 1 122 45566677777788776
No 411
>4g9j_C Synthetic peptide, serine/threonine-protein phosphatase PP1-alpha Ca subunit; activating peptide; 3.10A {Homo sapiens}
Probab=46.42 E-value=3.3 Score=20.69 Aligned_cols=10 Identities=60% Similarity=1.039 Sum_probs=5.7
Q ss_pred hHHHhhhhcc
Q 027441 7 RKRKRRRRHN 16 (223)
Q Consensus 7 ~~~~~~~~~~ 16 (223)
|||++|||.|
T Consensus 2 rkrpkrkrkn 11 (26)
T 4g9j_C 2 RKRPKRKRKN 11 (26)
T ss_pred Cccccccccc
Confidence 4566665554
No 412
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=46.30 E-value=48 Score=30.43 Aligned_cols=40 Identities=15% Similarity=0.208 Sum_probs=27.6
Q ss_pred CCCCCCceeEEEEccc----ccCC-CH-------HHHHHHHHHccCCCCEEEc
Q 027441 183 TPLNSSSVDVAVFCLS----LMGI-NF-------PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 183 lp~~~~sfD~Vi~~~~----l~~~-d~-------~~~l~e~~rvLkpgG~lvi 223 (223)
+|- .+.||+|++..- .||. .+ ..+-....+.|+|||.+++
T Consensus 216 ~p~-~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~ 267 (670)
T 4gua_A 216 FPP-QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVV 267 (670)
T ss_dssp CCC-CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCC-CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEE
Confidence 553 479999997653 3343 22 2555677899999999974
No 413
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=45.61 E-value=15 Score=30.76 Aligned_cols=76 Identities=18% Similarity=0.269 Sum_probs=41.2
Q ss_pred CCCCeEEEECCc--chHHHHHhc-----CceEEEecCCCCCcEE------EccCCCCC-------CCCCceeEEEEcccc
Q 027441 140 SPSLVIADFGCG--DARLAKSVK-----NKVFSFDLVSNDPSVI------ACDMSNTP-------LNSSSVDVAVFCLSL 199 (223)
Q Consensus 140 ~~~~~ILDiGcG--~G~~a~~la-----~~v~gvDis~~~~~~~------~~d~~~lp-------~~~~sfD~Vi~~~~l 199 (223)
.++.+||=+|++ .|.++..++ ..|++++ ++....+. ..| .... +....+|+|+-+..-
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~ 218 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIKDSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCG 218 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHGGGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC-
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHHcCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCc
Confidence 477899999983 355555554 3677776 33221111 111 1111 123579999966542
Q ss_pred cCCCHHHHHHHHHHccCCCCEEEc
Q 027441 200 MGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 200 ~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
..+..+.++|+++|.+++
T Consensus 219 ------~~~~~~~~~l~~~G~~v~ 236 (349)
T 4a27_A 219 ------DNTGKGLSLLKPLGTYIL 236 (349)
T ss_dssp ------------CTTEEEEEEEEE
T ss_pred ------hhHHHHHHHhhcCCEEEE
Confidence 234678899999999873
No 414
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=45.19 E-value=63 Score=25.98 Aligned_cols=82 Identities=11% Similarity=0.012 Sum_probs=51.7
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC---------------CCCcEEEccCCCCC-----CC-----CCc
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP-----LN-----SSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp-----~~-----~~s 189 (223)
.+.+||=.|++.|. ++..|+ .+|+.+|.+. ..+.++.+|+.+.. +. .+.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999987775 344444 4788887764 24567788886632 00 136
Q ss_pred eeEEEEcccccCC-------C---HH-----------HHHHHHHHccCCCCEEE
Q 027441 190 VDVAVFCLSLMGI-------N---FP-----------NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 190 fD~Vi~~~~l~~~-------d---~~-----------~~l~e~~rvLkpgG~lv 222 (223)
+|++|.+....+. + +. .+++.+.+.|+.+|.++
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv 179 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVII 179 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEE
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEE
Confidence 8999977554321 1 11 45666777788888776
No 415
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=45.14 E-value=3.9 Score=35.13 Aligned_cols=82 Identities=13% Similarity=0.095 Sum_probs=43.4
Q ss_pred CCCeEEEECCcc-hHHHHHhc----CceEEEecCCCCCcEEE--------ccCCC-CCCC--CCceeEEEEcccccCC-C
Q 027441 141 PSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSVIA--------CDMSN-TPLN--SSSVDVAVFCLSLMGI-N 203 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~~a~~la----~~v~gvDis~~~~~~~~--------~d~~~-lp~~--~~sfD~Vi~~~~l~~~-d 203 (223)
++.+|+=+|+|. |..+..++ .+|+++|.++....... .+... ..+. -..+|+|+.+...... .
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t 246 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKA 246 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 568999999975 22222222 47999998763211110 00000 0000 1257999875432221 1
Q ss_pred HHHHHHHHHHccCCCCEEE
Q 027441 204 FPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lv 222 (223)
+..+..++...++|||.|+
T Consensus 247 ~~li~~~~l~~mk~g~~iV 265 (377)
T 2vhw_A 247 PKLVSNSLVAHMKPGAVLV 265 (377)
T ss_dssp CCCBCHHHHTTSCTTCEEE
T ss_pred cceecHHHHhcCCCCcEEE
Confidence 1122456778899999886
No 416
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=43.81 E-value=42 Score=26.62 Aligned_cols=83 Identities=24% Similarity=0.238 Sum_probs=51.7
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC---------------CCCcEEEccCCCCCC-----C-----CCc
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPL-----N-----SSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp~-----~-----~~s 189 (223)
.+.++|=.|++.|. ++..|+ .+|+.++... ..+.++.+|+.+..- . .+.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789989987765 344444 4677766543 346677888876320 0 136
Q ss_pred eeEEEEcccccCC------C---HH-----------HHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMGI------N---FP-----------NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~~------d---~~-----------~~l~e~~rvLkpgG~lvi 223 (223)
.|++|.+..+.+. + +. .++..+.+.++++|.+++
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 150 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVL 150 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEE
Confidence 7999977665432 1 11 455677778888887763
No 417
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=43.73 E-value=47 Score=26.50 Aligned_cols=83 Identities=16% Similarity=0.116 Sum_probs=52.0
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC---------------CCCcEEEccCCCCC-----CC-----CCc
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP-----LN-----SSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp-----~~-----~~s 189 (223)
.+.++|=.|++.|. ++..|+ .+|+.++... ..+.++.+|+.+.. +. .+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56789999988775 344444 4677776543 34567788886632 00 136
Q ss_pred eeEEEEcccccCC------C---HH-----------HHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMGI------N---FP-----------NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~~------d---~~-----------~~l~e~~rvLkpgG~lvi 223 (223)
.|++|.+..+.+. + +. .++..+.+.|+++|.+++
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~ 163 (271)
T 3v2g_A 110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIIT 163 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEE
Confidence 8999987665422 1 11 456667777888887763
No 418
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=43.53 E-value=60 Score=24.41 Aligned_cols=78 Identities=15% Similarity=0.094 Sum_probs=44.4
Q ss_pred eEEEECCcchHHHHHhc-------CceEEEecCC--------CCCcEEEccCCCCCC-CCCceeEEEEcccccCC--C--
Q 027441 144 VIADFGCGDARLAKSVK-------NKVFSFDLVS--------NDPSVIACDMSNTPL-NSSSVDVAVFCLSLMGI--N-- 203 (223)
Q Consensus 144 ~ILDiGcG~G~~a~~la-------~~v~gvDis~--------~~~~~~~~d~~~lp~-~~~sfD~Vi~~~~l~~~--d-- 203 (223)
+||=.|+ +|.++..++ .+|++++-++ ..+.++.+|+.+... .-..+|+|+.+....+. .
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 4777775 344443333 4688887664 467888888866432 11357999988776432 1
Q ss_pred -HHHHHHHHHHccCC-CCEEE
Q 027441 204 -FPNYLQEAQRVLKP-RGEEQ 222 (223)
Q Consensus 204 -~~~~l~e~~rvLkp-gG~lv 222 (223)
.......+.+.++. |+.++
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v 101 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAV 101 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEE
T ss_pred HHHHHHHHHHHHHHHcCCcEE
Confidence 12334445555544 34444
No 419
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=43.45 E-value=81 Score=25.95 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=47.8
Q ss_pred CCeEEEECCcc--hHHHHHhc---C--ceEEEecCCCCCc---------EEEccCCCCCCCCCceeEEEEcccccCCCHH
Q 027441 142 SLVIADFGCGD--ARLAKSVK---N--KVFSFDLVSNDPS---------VIACDMSNTPLNSSSVDVAVFCLSLMGINFP 205 (223)
Q Consensus 142 ~~~ILDiGcG~--G~~a~~la---~--~v~gvDis~~~~~---------~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~ 205 (223)
..+|.=||+|. +.++..|. . .|+++|.++.... ....+...+ .-...|+|+.+--.. ...
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~--~~~~aDvVilavp~~--~~~ 108 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV--EDFSPDFVMLSSPVR--TFR 108 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGG--GGGCCSEEEECSCGG--GHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHH--hhccCCEEEEeCCHH--HHH
Confidence 46899999986 33555554 2 7999998863211 112222220 123479998775543 245
Q ss_pred HHHHHHHHccCCCCEEE
Q 027441 206 NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 206 ~~l~e~~rvLkpgG~lv 222 (223)
.++.++...|+||.+++
T Consensus 109 ~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 109 EIAKKLSYILSEDATVT 125 (314)
T ss_dssp HHHHHHHHHSCTTCEEE
T ss_pred HHHHHHhhccCCCcEEE
Confidence 78888989999988764
No 420
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=43.31 E-value=57 Score=25.47 Aligned_cols=60 Identities=18% Similarity=0.182 Sum_probs=38.6
Q ss_pred CCCeEEEECCc--chH---HHHHhc---CceEEEecCC-------------CCCcEEEccCCCCC-----C-----CCCc
Q 027441 141 PSLVIADFGCG--DAR---LAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTP-----L-----NSSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG--~G~---~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~lp-----~-----~~~s 189 (223)
.+.+||=.|++ .|. ++..|+ .+|+.++.+. ..+.++.+|+.+.. + ..+.
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 92 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDS 92 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56889999975 443 333443 4788887663 34677888887632 0 0246
Q ss_pred eeEEEEccccc
Q 027441 190 VDVAVFCLSLM 200 (223)
Q Consensus 190 fD~Vi~~~~l~ 200 (223)
+|++|.+..+.
T Consensus 93 id~lv~nAg~~ 103 (271)
T 3ek2_A 93 LDGLVHSIGFA 103 (271)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEECCccC
Confidence 89999876654
No 421
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=43.15 E-value=13 Score=32.31 Aligned_cols=30 Identities=13% Similarity=0.239 Sum_probs=23.2
Q ss_pred CCCeEEEECCcchHHHHHhc------------CceEEEecCC
Q 027441 141 PSLVIADFGCGDARLAKSVK------------NKVFSFDLVS 170 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la------------~~v~gvDis~ 170 (223)
....|+|+|.|.|.++..+. .+++.||+|+
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp 121 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINP 121 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCH
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCH
Confidence 34579999999999866542 2678899987
No 422
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=42.78 E-value=97 Score=23.01 Aligned_cols=56 Identities=20% Similarity=0.249 Sum_probs=35.1
Q ss_pred eEEEECCcchHHHHHh----c---CceEEEecCC-------CCCcEEEccCCCCCC-CCCceeEEEEccccc
Q 027441 144 VIADFGCGDARLAKSV----K---NKVFSFDLVS-------NDPSVIACDMSNTPL-NSSSVDVAVFCLSLM 200 (223)
Q Consensus 144 ~ILDiGcG~G~~a~~l----a---~~v~gvDis~-------~~~~~~~~d~~~lp~-~~~sfD~Vi~~~~l~ 200 (223)
+||=+|+ +|.++..+ . .+|++++-++ ..+.++.+|+.+... .-..+|+|+.+....
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred eEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 5777774 34333333 2 4688888765 467788888865431 013579999877664
No 423
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=42.51 E-value=23 Score=28.64 Aligned_cols=60 Identities=13% Similarity=0.121 Sum_probs=36.6
Q ss_pred CCCeEEEECCcchHHHHHhc-------CceEEEecCCC----CCcEEEccCCCCC-----CCCCceeEEEEcccccC
Q 027441 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVSN----DPSVIACDMSNTP-----LNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-------~~v~gvDis~~----~~~~~~~d~~~lp-----~~~~sfD~Vi~~~~l~~ 201 (223)
+..+||=.|+ +|.++..++ .+|++++-++. .+.++.+|+.+.. +....+|+|+.+.....
T Consensus 11 ~~~~vlVTGa-tG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 86 (321)
T 2pk3_A 11 GSMRALITGV-AGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSS 86 (321)
T ss_dssp --CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred CcceEEEECC-CChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccc
Confidence 5678887774 555544443 46888887654 3567778886532 11234799998776543
No 424
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=41.56 E-value=6.3 Score=34.23 Aligned_cols=31 Identities=26% Similarity=0.277 Sum_probs=21.6
Q ss_pred CCCeEEEECCcchH-HHHHhc----CceEEEecCCC
Q 027441 141 PSLVIADFGCGDAR-LAKSVK----NKVFSFDLVSN 171 (223)
Q Consensus 141 ~~~~ILDiGcG~G~-~a~~la----~~v~gvDis~~ 171 (223)
++.+|+=+|+|.-. .+..++ ..|+++|.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 57899999998643 222222 57999998863
No 425
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=41.10 E-value=8.8 Score=30.89 Aligned_cols=19 Identities=16% Similarity=0.223 Sum_probs=16.7
Q ss_pred HHHHHHHHHccCCCCEEEc
Q 027441 205 PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 205 ~~~l~e~~rvLkpgG~lvi 223 (223)
..+|.++.++|+|||.++|
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v 72 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYI 72 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEE
Confidence 4788899999999999875
No 426
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=41.10 E-value=65 Score=25.23 Aligned_cols=83 Identities=16% Similarity=0.271 Sum_probs=51.5
Q ss_pred CCCeEEEECCc--chH---HHHHhc---CceEEEecCC---------------CCCcEEEccCCCCCC-----C-----C
Q 027441 141 PSLVIADFGCG--DAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPL-----N-----S 187 (223)
Q Consensus 141 ~~~~ILDiGcG--~G~---~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp~-----~-----~ 187 (223)
.+.+||=.|++ .|. ++..|+ .+|+.++.+. ..+.++.+|+.+..- . .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 45788888876 444 344444 4687777654 157788889876431 0 1
Q ss_pred CceeEEEEcccccC----------CCHH--------------HHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMG----------INFP--------------NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~----------~d~~--------------~~l~e~~rvLkpgG~lvi 223 (223)
+.+|+++.+..+.+ .+.. .++..+.+.++++|.+++
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~ 145 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVT 145 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEE
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEE
Confidence 36899987765543 1222 355667777788887763
No 427
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=41.01 E-value=1e+02 Score=26.10 Aligned_cols=59 Identities=14% Similarity=0.111 Sum_probs=36.0
Q ss_pred CCeEEEECCcchHHHHHhc-------CceEEEecCCC--------------------------CCcEEEccCCCCC-C-C
Q 027441 142 SLVIADFGCGDARLAKSVK-------NKVFSFDLVSN--------------------------DPSVIACDMSNTP-L-N 186 (223)
Q Consensus 142 ~~~ILDiGcG~G~~a~~la-------~~v~gvDis~~--------------------------~~~~~~~d~~~lp-~-~ 186 (223)
..+||=.|+ +|.++..++ .+|++++-++. .+.++.+|+.+.+ + .
T Consensus 69 ~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~ 147 (427)
T 4f6c_A 69 LGNTLLTGA-TGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVL 147 (427)
T ss_dssp CEEEEEECT-TSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCCC
T ss_pred CCEEEEecC-CcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCCC
Confidence 457888885 444444433 36778776653 5678888986632 1 3
Q ss_pred CCceeEEEEcccccC
Q 027441 187 SSSVDVAVFCLSLMG 201 (223)
Q Consensus 187 ~~sfD~Vi~~~~l~~ 201 (223)
...+|+|+.+.+..+
T Consensus 148 ~~~~d~Vih~A~~~~ 162 (427)
T 4f6c_A 148 PENMDTIIHAGARTD 162 (427)
T ss_dssp SSCCSEEEECCCCC-
T ss_pred cCCCCEEEECCcccC
Confidence 457899998776554
No 428
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=40.21 E-value=1.3e+02 Score=24.07 Aligned_cols=61 Identities=13% Similarity=0.035 Sum_probs=37.3
Q ss_pred CCCeEEEECCcchHHHHHhc-------CceEEEecCC---------------CCCcEE-EccCCCCC-CC--CCceeEEE
Q 027441 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVS---------------NDPSVI-ACDMSNTP-LN--SSSVDVAV 194 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-------~~v~gvDis~---------------~~~~~~-~~d~~~lp-~~--~~sfD~Vi 194 (223)
.+.+||=.|+. |.++..++ .+|++++-+. ..+.++ .+|+.+.. +. -..+|+|+
T Consensus 10 ~~~~vlVTGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVTGAN-GFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 45789988864 44443332 3688887653 345566 68886543 11 12589999
Q ss_pred EcccccCC
Q 027441 195 FCLSLMGI 202 (223)
Q Consensus 195 ~~~~l~~~ 202 (223)
.+....+.
T Consensus 89 h~A~~~~~ 96 (342)
T 1y1p_A 89 HIASVVSF 96 (342)
T ss_dssp ECCCCCSC
T ss_pred EeCCCCCC
Confidence 87766543
No 429
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=38.62 E-value=35 Score=27.78 Aligned_cols=82 Identities=16% Similarity=0.095 Sum_probs=52.7
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC-----------CCCcEEEccCCCCCC----------CCCceeEE
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS-----------NDPSVIACDMSNTPL----------NSSSVDVA 193 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~-----------~~~~~~~~d~~~lp~----------~~~sfD~V 193 (223)
.+.++|=-|++.|. .+..|+ .+|+.+|.+. ....++.+|+.+..- .-+..|++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57889999998886 444454 5788888875 356677888866320 12578999
Q ss_pred EEcccccCC------C---HH-----------HHHHHHHHccCCCCEEE
Q 027441 194 VFCLSLMGI------N---FP-----------NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 194 i~~~~l~~~------d---~~-----------~~l~e~~rvLkpgG~lv 222 (223)
+.+...... + |. .+.+.+.+.|+.+|.++
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~II 156 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVV 156 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEE
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEE
Confidence 877665432 1 22 44455666666666654
No 430
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=38.41 E-value=49 Score=28.63 Aligned_cols=79 Identities=13% Similarity=0.058 Sum_probs=47.8
Q ss_pred CCeEEEECCcc-hH-HHHHhc---CceEEEecCC--------CCCcEEEccCCCCC----CCCCceeEEEEcccccCCCH
Q 027441 142 SLVIADFGCGD-AR-LAKSVK---NKVFSFDLVS--------NDPSVIACDMSNTP----LNSSSVDVAVFCLSLMGINF 204 (223)
Q Consensus 142 ~~~ILDiGcG~-G~-~a~~la---~~v~gvDis~--------~~~~~~~~d~~~lp----~~~~sfD~Vi~~~~l~~~d~ 204 (223)
..+|+=+|+|. |. ++..|. ..|+++|.++ ....++.+|+.+.. ..-..+|+|+++..-. ..
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~--~~ 81 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDP--QT 81 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSH--HH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCCh--HH
Confidence 35688888875 32 333333 4799999987 35667888887632 2234678888665411 11
Q ss_pred HHHHHHHHHccCCCCEEE
Q 027441 205 PNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 205 ~~~l~e~~rvLkpgG~lv 222 (223)
...+....|-+.|...++
T Consensus 82 n~~i~~~ar~~~p~~~Ii 99 (413)
T 3l9w_A 82 NLQLTEMVKEHFPHLQII 99 (413)
T ss_dssp HHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHhCCCCeEE
Confidence 244555666667765554
No 431
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=37.91 E-value=46 Score=26.34 Aligned_cols=60 Identities=15% Similarity=0.194 Sum_probs=36.8
Q ss_pred CCCeEEEECC-cchHHHHHh----c---CceEEEecCC------------CCCcEEEccCCCCC-----CC-----CC--
Q 027441 141 PSLVIADFGC-GDARLAKSV----K---NKVFSFDLVS------------NDPSVIACDMSNTP-----LN-----SS-- 188 (223)
Q Consensus 141 ~~~~ILDiGc-G~G~~a~~l----a---~~v~gvDis~------------~~~~~~~~d~~~lp-----~~-----~~-- 188 (223)
.+.+||=.|+ |+|.++..+ + .+|+.+|.++ ..+.++.+|+.+.. +. .+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3567888897 244444333 3 4688887664 14567788886632 00 12
Q ss_pred -ceeEEEEccccc
Q 027441 189 -SVDVAVFCLSLM 200 (223)
Q Consensus 189 -sfD~Vi~~~~l~ 200 (223)
.+|++|.+..+.
T Consensus 86 ~~iD~lv~nAg~~ 98 (269)
T 2h7i_A 86 NKLDGVVHSIGFM 98 (269)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCceEEEECCccC
Confidence 799999876644
No 432
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=37.07 E-value=1.3e+02 Score=23.25 Aligned_cols=58 Identities=24% Similarity=0.122 Sum_probs=35.5
Q ss_pred CCeEEEECCcchH---HHHHhc---CceEEEecCCCCC--cEEEccCCCCC----------CCCCceeEEEEcccc
Q 027441 142 SLVIADFGCGDAR---LAKSVK---NKVFSFDLVSNDP--SVIACDMSNTP----------LNSSSVDVAVFCLSL 199 (223)
Q Consensus 142 ~~~ILDiGcG~G~---~a~~la---~~v~gvDis~~~~--~~~~~d~~~lp----------~~~~sfD~Vi~~~~l 199 (223)
+.+||=.|++.|. ++..|+ .+|+++|.++... ..+.+|+.+.. -..+.+|++|.+..+
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~ 97 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGG 97 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 4678989988765 333443 4788888876432 23445543311 113578999987764
No 433
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=36.31 E-value=5.9 Score=33.80 Aligned_cols=82 Identities=10% Similarity=0.051 Sum_probs=42.6
Q ss_pred CCCeEEEECCcc-hHHHH-Hhc---CceEEEecCCCCCcE--------EEccCCCC-CCC--CCceeEEEEcccccCC-C
Q 027441 141 PSLVIADFGCGD-ARLAK-SVK---NKVFSFDLVSNDPSV--------IACDMSNT-PLN--SSSVDVAVFCLSLMGI-N 203 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~~a~-~la---~~v~gvDis~~~~~~--------~~~d~~~l-p~~--~~sfD~Vi~~~~l~~~-d 203 (223)
.+.+|+=+|+|. |..+. .+. .+|+++|.++..... +..|.... .+. -..+|+|+.+...... .
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~ 244 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKA 244 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence 458899999964 22222 222 589999987622111 11111110 000 1257999876654321 1
Q ss_pred HHHHHHHHHHccCCCCEEE
Q 027441 204 FPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lv 222 (223)
+..+..++.+.++|||.++
T Consensus 245 ~~li~~~~l~~mk~gg~iV 263 (369)
T 2eez_A 245 PKLVTRDMLSLMKEGAVIV 263 (369)
T ss_dssp -CCSCHHHHTTSCTTCEEE
T ss_pred chhHHHHHHHhhcCCCEEE
Confidence 1123566778889999886
No 434
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=35.73 E-value=14 Score=30.51 Aligned_cols=81 Identities=14% Similarity=0.039 Sum_probs=45.2
Q ss_pred CCCeEEEECCcc-hH-HHHHhc---CceEEEecCCCCCcEEEccCCCCCCCCCceeEEEEcccccCCCHHHHHHHHHHcc
Q 027441 141 PSLVIADFGCGD-AR-LAKSVK---NKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVL 215 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~-~a~~la---~~v~gvDis~~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvL 215 (223)
.+.+|.=||+|. |. ++..+. .+|+++|.++....... ....+.---...|+|+.+..+.......+-.+....|
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~m 199 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNVDV-ISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANA 199 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTCSE-ECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTC
T ss_pred ecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccccc-ccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhh
Confidence 567899999986 32 344343 58999998874433211 0111110013468888776652110111124566788
Q ss_pred CCCCEEE
Q 027441 216 KPRGEEQ 222 (223)
Q Consensus 216 kpgG~lv 222 (223)
+||.+|+
T Consensus 200 k~gailI 206 (290)
T 3gvx_A 200 RKNLTIV 206 (290)
T ss_dssp CTTCEEE
T ss_pred hcCceEE
Confidence 9998876
No 435
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=35.65 E-value=1.4e+02 Score=22.65 Aligned_cols=61 Identities=11% Similarity=0.180 Sum_probs=38.1
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC--------CCC-cEEEccCC-CCCCCCCceeEEEEcccccC
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS--------NDP-SVIACDMS-NTPLNSSSVDVAVFCLSLMG 201 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~--------~~~-~~~~~d~~-~lp~~~~sfD~Vi~~~~l~~ 201 (223)
.+.+||=.|+..|. ++..|. .+|++++-++ ..+ .++.+|+. .+.-.-..+|+|+.+.....
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSGP 96 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCCT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCCC
Confidence 46789989864432 223332 4788888775 356 88889986 11111246899998877654
No 436
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=34.61 E-value=1.6e+02 Score=23.30 Aligned_cols=55 Identities=15% Similarity=0.118 Sum_probs=33.4
Q ss_pred eEEEECCcchHHHHHhc-------CceEEEecCC--------CCCcEEEccCCCCCCCC--CceeEEEEccccc
Q 027441 144 VIADFGCGDARLAKSVK-------NKVFSFDLVS--------NDPSVIACDMSNTPLNS--SSVDVAVFCLSLM 200 (223)
Q Consensus 144 ~ILDiGcG~G~~a~~la-------~~v~gvDis~--------~~~~~~~~d~~~lp~~~--~sfD~Vi~~~~l~ 200 (223)
+||=.|+ +|.++..++ .+|+++|-++ ..+.++.+|+.+..+.. .. |+|+.+....
T Consensus 2 ~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~ 73 (312)
T 3ko8_A 2 RIVVTGG-AGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAANP 73 (312)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCSSC
T ss_pred EEEEECC-CChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCCCC
Confidence 5777775 444444433 4788887654 35667888887654221 11 8998776643
No 437
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=34.58 E-value=50 Score=27.04 Aligned_cols=59 Identities=10% Similarity=0.101 Sum_probs=38.8
Q ss_pred CeEEEECCcchHHHHHhc-------CceEEEecCC---------------CCCcEEEccCCCCC-----CCCCceeEEEE
Q 027441 143 LVIADFGCGDARLAKSVK-------NKVFSFDLVS---------------NDPSVIACDMSNTP-----LNSSSVDVAVF 195 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la-------~~v~gvDis~---------------~~~~~~~~d~~~lp-----~~~~sfD~Vi~ 195 (223)
.+||=+|+ +|.++..++ .+|++++-++ ..+.++.+|+.+.. +....+|+|+.
T Consensus 11 ~~IlVtGa-tG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 11 GRVLIAGA-TGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp CCEEEECT-TSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEECC-CcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 57888885 455444443 4688887765 46778889987632 22226899998
Q ss_pred cccccCC
Q 027441 196 CLSLMGI 202 (223)
Q Consensus 196 ~~~l~~~ 202 (223)
+.....+
T Consensus 90 ~a~~~n~ 96 (346)
T 3i6i_A 90 TVGGESI 96 (346)
T ss_dssp CCCGGGG
T ss_pred CCchhhH
Confidence 8877555
No 438
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=33.95 E-value=1.7e+02 Score=22.81 Aligned_cols=60 Identities=13% Similarity=0.113 Sum_probs=36.1
Q ss_pred CCCeEEEECCc--chH---HHHHhc---CceEEEecCC-------------CCCcEEEccCCCCC----------CCCCc
Q 027441 141 PSLVIADFGCG--DAR---LAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTP----------LNSSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG--~G~---~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~lp----------~~~~s 189 (223)
.+.+||=.|++ .|. ++..|+ .+|+.++.++ ....++.+|+.+.. -..+.
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35678888875 332 333333 4688887654 13356778886532 01246
Q ss_pred eeEEEEccccc
Q 027441 190 VDVAVFCLSLM 200 (223)
Q Consensus 190 fD~Vi~~~~l~ 200 (223)
+|++|.+..+.
T Consensus 88 iD~lv~~Ag~~ 98 (265)
T 1qsg_A 88 FDGFVHSIGFA 98 (265)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877654
No 439
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=32.62 E-value=7.5 Score=33.07 Aligned_cols=82 Identities=11% Similarity=0.022 Sum_probs=43.8
Q ss_pred CCCeEEEECCcchH-HHHHhc----CceEEEecCCCCCcEE---------EccCCCCCCC--CCceeEEEEcccccCC-C
Q 027441 141 PSLVIADFGCGDAR-LAKSVK----NKVFSFDLVSNDPSVI---------ACDMSNTPLN--SSSVDVAVFCLSLMGI-N 203 (223)
Q Consensus 141 ~~~~ILDiGcG~G~-~a~~la----~~v~gvDis~~~~~~~---------~~d~~~lp~~--~~sfD~Vi~~~~l~~~-d 203 (223)
++.+||=+|+|.-. .+..++ .+|+++|.++...... ..+.....+. -..+|+|+.+...... .
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~ 245 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 245 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 34899999997533 222222 4799999886321111 0000000000 0258999977654332 1
Q ss_pred HHHHHHHHHHccCCCCEEE
Q 027441 204 FPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lv 222 (223)
+..+..+....|+|||.++
T Consensus 246 ~~li~~~~~~~~~~g~~iv 264 (361)
T 1pjc_A 246 PILVPASLVEQMRTGSVIV 264 (361)
T ss_dssp CCCBCHHHHTTSCTTCEEE
T ss_pred CeecCHHHHhhCCCCCEEE
Confidence 1112455677899999876
No 440
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=32.34 E-value=1.2e+02 Score=20.62 Aligned_cols=77 Identities=17% Similarity=0.145 Sum_probs=41.5
Q ss_pred CCeEEEECCcc-hH-HHHHhc---CceEEEecCCC---------CCcEEEccCCCCC----CCCCceeEEEEcccccCCC
Q 027441 142 SLVIADFGCGD-AR-LAKSVK---NKVFSFDLVSN---------DPSVIACDMSNTP----LNSSSVDVAVFCLSLMGIN 203 (223)
Q Consensus 142 ~~~ILDiGcG~-G~-~a~~la---~~v~gvDis~~---------~~~~~~~d~~~lp----~~~~sfD~Vi~~~~l~~~d 203 (223)
+.+|+=+|+|. |. ++..|. ..|+++|.++. .+.++.+|..+.. ..-..+|+|+.+.... .
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~--~ 81 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE--E 81 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH--H
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc--h
Confidence 35788888865 22 233333 46888988751 3445566654321 1124589988774321 1
Q ss_pred HHHHHHHHHHccCCCCE
Q 027441 204 FPNYLQEAQRVLKPRGE 220 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~ 220 (223)
....+..+.+.+.++-+
T Consensus 82 ~~~~~~~~~~~~~~~~i 98 (140)
T 1lss_A 82 VNLMSSLLAKSYGINKT 98 (140)
T ss_dssp HHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHcCCCEE
Confidence 12345555666776543
No 441
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=31.91 E-value=45 Score=27.11 Aligned_cols=69 Identities=12% Similarity=0.054 Sum_probs=42.3
Q ss_pred CeEEEEC-Ccc--hHHHHHhc---CceEEEecCCCCCcEEEccCCCCCCCCCceeEEEEcccccCCCHHHHHHHHHHccC
Q 027441 143 LVIADFG-CGD--ARLAKSVK---NKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLK 216 (223)
Q Consensus 143 ~~ILDiG-cG~--G~~a~~la---~~v~gvDis~~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvLk 216 (223)
.+|.=|| +|. +.++..|. ..|+++|.++.. +... .-...|+|+.+--... ...++.++...|+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------~~~~---~~~~aDvVilavp~~~--~~~vl~~l~~~l~ 90 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------VAES---ILANADVVIVSVPINL--TLETIERLKPYLT 90 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------GHHH---HHTTCSEEEECSCGGG--HHHHHHHHGGGCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------CHHH---HhcCCCEEEEeCCHHH--HHHHHHHHHhhcC
Confidence 4688999 886 33455554 368888876531 1100 0134688887655432 5677888888888
Q ss_pred CCCEEE
Q 027441 217 PRGEEQ 222 (223)
Q Consensus 217 pgG~lv 222 (223)
|+.+++
T Consensus 91 ~~~iv~ 96 (298)
T 2pv7_A 91 ENMLLA 96 (298)
T ss_dssp TTSEEE
T ss_pred CCcEEE
Confidence 877654
No 442
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=31.90 E-value=1.3e+02 Score=27.59 Aligned_cols=49 Identities=16% Similarity=0.236 Sum_probs=32.4
Q ss_pred CCcEEEccCCCC----------CC-CCCceeEEEEcccccCCCHH---HHHHHHHHccCCCCEEE
Q 027441 172 DPSVIACDMSNT----------PL-NSSSVDVAVFCLSLMGINFP---NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 172 ~~~~~~~d~~~l----------p~-~~~sfD~Vi~~~~l~~~d~~---~~l~e~~rvLkpgG~lv 222 (223)
+..++.+|+.+. .+ ....--++++-.++++++++ .+|..+.+ + |+|.++
T Consensus 189 ~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~ 251 (695)
T 2zwa_A 189 KYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFI 251 (695)
T ss_dssp SEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEE
T ss_pred CeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEE
Confidence 345667888663 22 44556788899999999555 67776665 3 566554
No 443
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=31.57 E-value=63 Score=25.50 Aligned_cols=60 Identities=18% Similarity=0.149 Sum_probs=38.0
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC-----------------CCCcEEEccCCCCC-----CC-----C
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS-----------------NDPSVIACDMSNTP-----LN-----S 187 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~-----------------~~~~~~~~d~~~lp-----~~-----~ 187 (223)
.+.++|=.|++.|. ++..|+ .+|+.++.+. ..+.++.+|+.+.. +. .
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45789999988775 344444 4677766442 24566788886632 00 1
Q ss_pred CceeEEEEccccc
Q 027441 188 SSVDVAVFCLSLM 200 (223)
Q Consensus 188 ~sfD~Vi~~~~l~ 200 (223)
+..|++|.+..+.
T Consensus 90 g~iD~lvnnAg~~ 102 (262)
T 3ksu_A 90 GKVDIAINTVGKV 102 (262)
T ss_dssp CSEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999877654
No 444
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=31.12 E-value=29 Score=27.91 Aligned_cols=78 Identities=12% Similarity=0.195 Sum_probs=43.7
Q ss_pred CeEEEECC-cc-h-HHHHHhc---CceEEEecCCCCCcEEE---ccCCCCCCCCCceeEEEEcccccCCCHHHHHHHHHH
Q 027441 143 LVIADFGC-GD-A-RLAKSVK---NKVFSFDLVSNDPSVIA---CDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQR 213 (223)
Q Consensus 143 ~~ILDiGc-G~-G-~~a~~la---~~v~gvDis~~~~~~~~---~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l~e~~r 213 (223)
.+|.=||+ |. | .++..|. .+|+++|.++....... .+..+..-.-...|+|+.+..-.. ...++.++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~--~~~v~~~l~~ 89 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNI--IEKVAEDIVP 89 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHH--HHHHHHHHGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchH--HHHHHHHHHH
Confidence 47999999 85 3 2444444 36888887752211000 011111101135799987765332 3567777777
Q ss_pred ccCCCCEEE
Q 027441 214 VLKPRGEEQ 222 (223)
Q Consensus 214 vLkpgG~lv 222 (223)
.|+||.+++
T Consensus 90 ~l~~~~ivv 98 (286)
T 3c24_A 90 RVRPGTIVL 98 (286)
T ss_dssp GSCTTCEEE
T ss_pred hCCCCCEEE
Confidence 888887664
No 445
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=30.58 E-value=68 Score=25.44 Aligned_cols=82 Identities=22% Similarity=0.179 Sum_probs=49.1
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC---------------CCCcEEEccCCCCCC-----C-----CCc
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPL-----N-----SSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp~-----~-----~~s 189 (223)
.+.++|=.|++.|. ++..|+ .+|+.++... ..+.++.+|+.+..- . .+.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999988775 344444 4666654332 245677788866320 0 146
Q ss_pred eeEEEEcccccCC------C---HH-----------HHHHHHHHccCCCCEEE
Q 027441 190 VDVAVFCLSLMGI------N---FP-----------NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 190 fD~Vi~~~~l~~~------d---~~-----------~~l~e~~rvLkpgG~lv 222 (223)
+|++|.+..+... + +. .++..+.+.++++|.++
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv 158 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRII 158 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEE
Confidence 8999987765432 1 11 34556667777777765
No 446
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=30.36 E-value=74 Score=25.61 Aligned_cols=83 Identities=13% Similarity=0.029 Sum_probs=50.9
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC----------------CCCcEEEccCCCCCC-----C-----CC
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPL-----N-----SS 188 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~----------------~~~~~~~~d~~~lp~-----~-----~~ 188 (223)
.+.+||=.|++.|. ++..|+ .+|+.+|.+. ..+.++.+|+.+..- . .+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46789999987765 334444 4677777652 245566777765320 0 14
Q ss_pred ceeEEEEcccccCC-------CH---H-----------HHHHHHHHccCCCCEEEc
Q 027441 189 SVDVAVFCLSLMGI-------NF---P-----------NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 189 sfD~Vi~~~~l~~~-------d~---~-----------~~l~e~~rvLkpgG~lvi 223 (223)
.+|+++.+..+... +. . .+++.+.+.++.+|.+++
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 68999977765321 11 1 455667777888887763
No 447
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=30.19 E-value=17 Score=30.17 Aligned_cols=20 Identities=30% Similarity=0.614 Sum_probs=17.5
Q ss_pred HHHHHHHHHHccCCCCEEEc
Q 027441 204 FPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lvi 223 (223)
...+|..+..+|+|||.|+|
T Consensus 212 L~~~L~~a~~~L~~gGrl~v 231 (285)
T 1wg8_A 212 LKEFLEQAAEVLAPGGRLVV 231 (285)
T ss_dssp HHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEE
Confidence 34899999999999999975
No 448
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=30.17 E-value=78 Score=25.67 Aligned_cols=61 Identities=20% Similarity=0.239 Sum_probs=38.8
Q ss_pred CCCeEEEECCcchHHHHHhc-------CceEEEecCC--CCCcEEEccCCCCC-CC--CCceeEEEEcccccCC
Q 027441 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVS--NDPSVIACDMSNTP-LN--SSSVDVAVFCLSLMGI 202 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-------~~v~gvDis~--~~~~~~~~d~~~lp-~~--~~sfD~Vi~~~~l~~~ 202 (223)
...+||=.|+ +|.++..++ .+|++++-++ ..+.++.+|+.+.. +. -..+|+|+.+.++...
T Consensus 18 ~~~~vlVtGa-tG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~ 90 (347)
T 4id9_A 18 GSHMILVTGS-AGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSW 90 (347)
T ss_dssp ---CEEEETT-TSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCS
T ss_pred CCCEEEEECC-CChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcccCc
Confidence 4577998885 455444443 4789998876 46788889987632 00 1258999987776554
No 449
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=29.87 E-value=39 Score=28.62 Aligned_cols=79 Identities=15% Similarity=0.184 Sum_probs=45.6
Q ss_pred CCeEEEECCcc-h-HHHHHhc---CceEEEecCCCCCcEE-------EccCCCCCCCCCceeEEEEcccccCCCHHHHHH
Q 027441 142 SLVIADFGCGD-A-RLAKSVK---NKVFSFDLVSNDPSVI-------ACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQ 209 (223)
Q Consensus 142 ~~~ILDiGcG~-G-~~a~~la---~~v~gvDis~~~~~~~-------~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l~ 209 (223)
..+|.=||+|. | .++..|+ ..|+++|.++..+.-+ ..+...+--.....|+|+.+..-. ....++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~--~v~~vl~ 99 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA--VVDSMLQ 99 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG--GHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH--HHHHHHH
Confidence 46799999885 2 2344444 4789999886322110 001100000012348888766544 4567788
Q ss_pred HHHHccCCCCEEE
Q 027441 210 EAQRVLKPRGEEQ 222 (223)
Q Consensus 210 e~~rvLkpgG~lv 222 (223)
++...|+||.+++
T Consensus 100 ~l~~~l~~g~iiI 112 (358)
T 4e21_A 100 RMTPLLAANDIVI 112 (358)
T ss_dssp HHGGGCCTTCEEE
T ss_pred HHHhhCCCCCEEE
Confidence 8888898887765
No 450
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=29.74 E-value=88 Score=25.39 Aligned_cols=60 Identities=15% Similarity=0.091 Sum_probs=38.5
Q ss_pred CCCeEEEECCcchHHHHHhc-------CceEEEecCC-------------------CCCcEEEccCCCCCC---CCCcee
Q 027441 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVS-------------------NDPSVIACDMSNTPL---NSSSVD 191 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-------~~v~gvDis~-------------------~~~~~~~~d~~~lp~---~~~sfD 191 (223)
...+||=.|+ +|.++..++ .+|++++-++ ..+.++.+|+.+... .-..+|
T Consensus 24 ~~~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 102 (351)
T 3ruf_A 24 SPKTWLITGV-AGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD 102 (351)
T ss_dssp SCCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred CCCeEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence 4578998884 455444443 4788888754 356788889866320 012589
Q ss_pred EEEEcccccC
Q 027441 192 VAVFCLSLMG 201 (223)
Q Consensus 192 ~Vi~~~~l~~ 201 (223)
+|+.+....+
T Consensus 103 ~Vih~A~~~~ 112 (351)
T 3ruf_A 103 HVLHQAALGS 112 (351)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCccCC
Confidence 9998877543
No 451
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=29.69 E-value=65 Score=25.45 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=44.9
Q ss_pred eEEEECCcc-h-HHHHHhc---CceEEEecCCCCCcEEEccC-----------CCCCCCCCceeEEEEcccccCCCHHHH
Q 027441 144 VIADFGCGD-A-RLAKSVK---NKVFSFDLVSNDPSVIACDM-----------SNTPLNSSSVDVAVFCLSLMGINFPNY 207 (223)
Q Consensus 144 ~ILDiGcG~-G-~~a~~la---~~v~gvDis~~~~~~~~~d~-----------~~lp~~~~sfD~Vi~~~~l~~~d~~~~ 207 (223)
+|.=||+|. | .++..|. ..|+.+|.++.....+.... ...+-.-..+|+|+.+.--.. ...+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~--~~~v 79 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQ--VSDA 79 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGG--HHHH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHh--HHHH
Confidence 577789985 3 2444443 36888988775433221110 000000124788887765443 4678
Q ss_pred HHHHHHccCCCCEEE
Q 027441 208 LQEAQRVLKPRGEEQ 222 (223)
Q Consensus 208 l~e~~rvLkpgG~lv 222 (223)
+.++...|+|+..++
T Consensus 80 ~~~l~~~l~~~~~vv 94 (291)
T 1ks9_A 80 VKSLASTLPVTTPIL 94 (291)
T ss_dssp HHHHHTTSCTTSCEE
T ss_pred HHHHHhhCCCCCEEE
Confidence 888888888887665
No 452
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=29.69 E-value=1.1e+02 Score=26.71 Aligned_cols=57 Identities=14% Similarity=0.126 Sum_probs=37.5
Q ss_pred CeEEEECCcchHHHHHhc-------CceEEEecCCC--------------------------CCcEEEccCCCCC-C-CC
Q 027441 143 LVIADFGCGDARLAKSVK-------NKVFSFDLVSN--------------------------DPSVIACDMSNTP-L-NS 187 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la-------~~v~gvDis~~--------------------------~~~~~~~d~~~lp-~-~~ 187 (223)
.+||=.| |+|.++..+. .+|++++-++. .+.++.+|+.+.+ + ..
T Consensus 151 ~~VLVTG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~ 229 (508)
T 4f6l_B 151 GNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVLP 229 (508)
T ss_dssp EEEEESC-TTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCCCS
T ss_pred CeEEEEC-CccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCCCc
Confidence 5677776 5676666554 36777765543 6778899987632 2 24
Q ss_pred CceeEEEEccccc
Q 027441 188 SSVDVAVFCLSLM 200 (223)
Q Consensus 188 ~sfD~Vi~~~~l~ 200 (223)
..+|+|+.+.+..
T Consensus 230 ~~~D~Vih~Aa~~ 242 (508)
T 4f6l_B 230 ENMDTIIHAGART 242 (508)
T ss_dssp SCCSEEEECCCC-
T ss_pred cCCCEEEECCcee
Confidence 5789999776654
No 453
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=29.57 E-value=1.4e+02 Score=23.95 Aligned_cols=83 Identities=18% Similarity=0.215 Sum_probs=51.1
Q ss_pred CCCeEEEECCcc--hH---HHHHhc---CceEEEecCC-------------CCCcEEEccCCCCC-----CC-----CCc
Q 027441 141 PSLVIADFGCGD--AR---LAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTP-----LN-----SSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~--G~---~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~lp-----~~-----~~s 189 (223)
.+.+||=.|++. |. ++..|+ .+|+.+|.+. ..+.++.+|+.+.. +. .+.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 357889899753 33 444444 5788888774 24567788887632 00 146
Q ss_pred eeEEEEcccccC----------CC---HH-----------HHHHHHHHccCCCCEEEc
Q 027441 190 VDVAVFCLSLMG----------IN---FP-----------NYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 190 fD~Vi~~~~l~~----------~d---~~-----------~~l~e~~rvLkpgG~lvi 223 (223)
+|++|.+..+.. .+ +. .++..+.+.++.+|.+++
T Consensus 109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~ 166 (296)
T 3k31_A 109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILT 166 (296)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEE
T ss_pred CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 899998776542 12 11 455566677777887763
No 454
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=29.54 E-value=1.5e+02 Score=20.92 Aligned_cols=79 Identities=6% Similarity=-0.020 Sum_probs=42.9
Q ss_pred CCeEEEECCcchH--HHHHhc---CceEEEecCC------------CCCcEEEccCCCCC----CCCCceeEEEEccccc
Q 027441 142 SLVIADFGCGDAR--LAKSVK---NKVFSFDLVS------------NDPSVIACDMSNTP----LNSSSVDVAVFCLSLM 200 (223)
Q Consensus 142 ~~~ILDiGcG~G~--~a~~la---~~v~gvDis~------------~~~~~~~~d~~~lp----~~~~sfD~Vi~~~~l~ 200 (223)
..+|+=+|||.=. ++..|. ..|+++|.++ ..+.++.+|..+.. ..-..+|+|+++..-.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 3567778875421 222332 4789999863 24667788876531 1124578888765421
Q ss_pred CCCHHHHHHHHHHccCCCCEEE
Q 027441 201 GINFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 201 ~~d~~~~l~e~~rvLkpgG~lv 222 (223)
.....+....+.+.|...++
T Consensus 83 --~~n~~~~~~a~~~~~~~~ii 102 (153)
T 1id1_A 83 --ADNAFVVLSAKDMSSDVKTV 102 (153)
T ss_dssp --HHHHHHHHHHHHHTSSSCEE
T ss_pred --HHHHHHHHHHHHHCCCCEEE
Confidence 11234444555555544443
No 455
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=29.12 E-value=28 Score=34.00 Aligned_cols=30 Identities=17% Similarity=0.327 Sum_probs=24.0
Q ss_pred CCCeEEEECCcchHHHHHhc--C---ceEEEecCC
Q 027441 141 PSLVIADFGCGDARLAKSVK--N---KVFSFDLVS 170 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la--~---~v~gvDis~ 170 (223)
...++|||=||.|.++..|. + .|.++|+++
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~ 573 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWD 573 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSH
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCH
Confidence 34689999999999887774 3 367999986
No 456
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=28.92 E-value=95 Score=23.31 Aligned_cols=56 Identities=14% Similarity=0.111 Sum_probs=35.7
Q ss_pred eEEEECCcchHHHHHhc-------CceEEEecCC------CCCcEEEccCCC-CC---CCCCceeEEEEccccc
Q 027441 144 VIADFGCGDARLAKSVK-------NKVFSFDLVS------NDPSVIACDMSN-TP---LNSSSVDVAVFCLSLM 200 (223)
Q Consensus 144 ~ILDiGcG~G~~a~~la-------~~v~gvDis~------~~~~~~~~d~~~-lp---~~~~sfD~Vi~~~~l~ 200 (223)
+||=.|+ +|.++..++ .+|++++-++ ..+.++.+|+.+ .. -.-..+|+|+.+....
T Consensus 2 ~ilItGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 2 KIFIVGS-TGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp EEEEEST-TSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 5777774 444444443 3688888775 356778899877 21 1113589999877654
No 457
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=28.76 E-value=18 Score=30.83 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=17.0
Q ss_pred HHHHHHHHHccCCCCEEEc
Q 027441 205 PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 205 ~~~l~e~~rvLkpgG~lvi 223 (223)
..+|..+..+|+|||.|+|
T Consensus 254 ~~~L~~a~~~L~~gGRl~V 272 (347)
T 3tka_A 254 EQALKSSLNVLAPGGRLSI 272 (347)
T ss_dssp HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEE
Confidence 4889999999999999986
No 458
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=28.68 E-value=27 Score=37.61 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=48.3
Q ss_pred CCCCeEEEECC--cchHHHHHhc----CceEEEecCCCCCcEE-----------EccCCCC-------CCC-CCceeEEE
Q 027441 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSVI-----------ACDMSNT-------PLN-SSSVDVAV 194 (223)
Q Consensus 140 ~~~~~ILDiGc--G~G~~a~~la----~~v~gvDis~~~~~~~-----------~~d~~~l-------p~~-~~sfD~Vi 194 (223)
.++.+||=.|+ |.|..+..++ .+|++++.++....+. ..|.... ... ...+|+|+
T Consensus 1666 ~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVl 1745 (2512)
T 2vz8_A 1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVL 1745 (2512)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEE
T ss_pred CCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEE
Confidence 47789999874 3455555555 5788888665221111 1111111 111 23599999
Q ss_pred EcccccCCCHHHHHHHHHHccCCCCEEE
Q 027441 195 FCLSLMGINFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 195 ~~~~l~~~d~~~~l~e~~rvLkpgG~lv 222 (223)
.+.. ...+....++|+|||.++
T Consensus 1746 d~~g------~~~l~~~l~~L~~~Gr~V 1767 (2512)
T 2vz8_A 1746 NSLA------EEKLQASVRCLAQHGRFL 1767 (2512)
T ss_dssp ECCC------HHHHHHHHTTEEEEEEEE
T ss_pred ECCC------chHHHHHHHhcCCCcEEE
Confidence 8654 577899999999999986
No 459
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=28.53 E-value=90 Score=27.82 Aligned_cols=73 Identities=15% Similarity=0.101 Sum_probs=40.8
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCCCCC------cEEEccCCCCCCCCCceeEEEEcccccCC-CHHHH
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVSNDP------SVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNY 207 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~~~~------~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d~~~~ 207 (223)
.+.+|+=+|+| |. .+..|+ .+|+++|+++... .+.+.+.... ...+|+|+....-.++ +
T Consensus 264 ~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~---~~~aDvVi~atG~~~vl~---- 335 (488)
T 3ond_A 264 AGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDV---VSEADIFVTTTGNKDIIM---- 335 (488)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGT---TTTCSEEEECSSCSCSBC----
T ss_pred cCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHH---HHhcCEEEeCCCChhhhh----
Confidence 67899999998 43 233333 5899999876211 1112222211 2357888765443332 2
Q ss_pred HHHHHHccCCCCEEE
Q 027441 208 LQEAQRVLKPRGEEQ 222 (223)
Q Consensus 208 l~e~~rvLkpgG~lv 222 (223)
.+..+.+++|++++
T Consensus 336 -~e~l~~mk~gaiVv 349 (488)
T 3ond_A 336 -LDHMKKMKNNAIVC 349 (488)
T ss_dssp -HHHHTTSCTTEEEE
T ss_pred -HHHHHhcCCCeEEE
Confidence 22456678888765
No 460
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=28.43 E-value=1.2e+02 Score=23.71 Aligned_cols=55 Identities=16% Similarity=0.309 Sum_probs=37.0
Q ss_pred CeEEEECCcchHHHHHhc-------CceEEEecCC----CCCcEEEccCCCCC-C---CCCceeEEEEcccc
Q 027441 143 LVIADFGCGDARLAKSVK-------NKVFSFDLVS----NDPSVIACDMSNTP-L---NSSSVDVAVFCLSL 199 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la-------~~v~gvDis~----~~~~~~~~d~~~lp-~---~~~sfD~Vi~~~~l 199 (223)
.+||=.|| |.++..++ .+|++++-++ ..+.++.+|+.+.. + -.+.+|+|+.+...
T Consensus 4 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~ 73 (286)
T 3gpi_A 4 SKILIAGC--GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAA 73 (286)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHH
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCCC
Confidence 56888884 66655554 4788888775 46778889986643 1 12348999977654
No 461
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=27.62 E-value=1.1e+02 Score=23.92 Aligned_cols=59 Identities=15% Similarity=0.120 Sum_probs=36.9
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEE-ecCC--------------CCCcEEEccCCCCC-----CC-----CCc
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSF-DLVS--------------NDPSVIACDMSNTP-----LN-----SSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gv-Dis~--------------~~~~~~~~d~~~lp-----~~-----~~s 189 (223)
.+.++|=.|++.|. ++..|+ .+|+.+ +.+. ..+.++.+|+.+.. +. -+.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46789999988775 344444 467766 4332 34667888887632 00 146
Q ss_pred eeEEEEcccc
Q 027441 190 VDVAVFCLSL 199 (223)
Q Consensus 190 fD~Vi~~~~l 199 (223)
.|+++.+...
T Consensus 87 id~lv~nAg~ 96 (259)
T 3edm_A 87 IHGLVHVAGG 96 (259)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999977643
No 462
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=27.24 E-value=60 Score=25.09 Aligned_cols=60 Identities=18% Similarity=0.147 Sum_probs=36.4
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCCCC----CcEEEccCCCCC-----CC-------CCceeEEEEccc
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVSND----PSVIACDMSNTP-----LN-------SSSVDVAVFCLS 198 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~~~----~~~~~~d~~~lp-----~~-------~~sfD~Vi~~~~ 198 (223)
.+.+||=.|++.|. ++..|+ .+|+.+|.++.. ..++.+|+.+.. +. .+.+|++|.+..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag 85 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAG 85 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEccc
Confidence 45688988977664 333443 468888877632 234456664421 00 157999998876
Q ss_pred cc
Q 027441 199 LM 200 (223)
Q Consensus 199 l~ 200 (223)
+.
T Consensus 86 ~~ 87 (241)
T 1dhr_A 86 GW 87 (241)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 463
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=27.03 E-value=68 Score=25.53 Aligned_cols=52 Identities=15% Similarity=0.034 Sum_probs=31.1
Q ss_pred CCeEEEECCcchHHHHHhc-------CceEEEecCCC----------------CCcEEEccCCCCCCCCCceeEEEEccc
Q 027441 142 SLVIADFGCGDARLAKSVK-------NKVFSFDLVSN----------------DPSVIACDMSNTPLNSSSVDVAVFCLS 198 (223)
Q Consensus 142 ~~~ILDiGcG~G~~a~~la-------~~v~gvDis~~----------------~~~~~~~d~~~lp~~~~sfD~Vi~~~~ 198 (223)
..+||=.|+ +|.++..++ .+|++++-++. .+.++.+|+. .+|+|+.+..
T Consensus 7 ~~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------~~d~vi~~a~ 78 (321)
T 3vps_A 7 KHRILITGG-AGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-------DVRLVYHLAS 78 (321)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-------TEEEEEECCC
T ss_pred CCeEEEECC-CChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-------cCCEEEECCc
Confidence 467888885 455444443 47888876543 1233333433 6899997776
Q ss_pred ccC
Q 027441 199 LMG 201 (223)
Q Consensus 199 l~~ 201 (223)
..+
T Consensus 79 ~~~ 81 (321)
T 3vps_A 79 HKS 81 (321)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 464
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=26.78 E-value=54 Score=28.74 Aligned_cols=82 Identities=13% Similarity=0.107 Sum_probs=46.0
Q ss_pred CCCeEEEECCcc-hH-HHHHhc---CceEEEecCCCCCcEEEccC------------------CCCCCC------CCcee
Q 027441 141 PSLVIADFGCGD-AR-LAKSVK---NKVFSFDLVSNDPSVIACDM------------------SNTPLN------SSSVD 191 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~-~a~~la---~~v~gvDis~~~~~~~~~d~------------------~~lp~~------~~sfD 191 (223)
...+|-=||+|. |. ++..|+ ..|+++|+++..+.-+.... ..+-+. -...|
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 446788888885 32 334444 47999999984432211110 001110 02358
Q ss_pred EEEEccc--c---cCC-C---HHHHHHHHHHccCCCCEEE
Q 027441 192 VAVFCLS--L---MGI-N---FPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 192 ~Vi~~~~--l---~~~-d---~~~~l~e~~rvLkpgG~lv 222 (223)
+|+.+-. . .+. | ...++..+...|++|-+++
T Consensus 87 vvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV 126 (446)
T 4a7p_A 87 AVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIV 126 (446)
T ss_dssp EEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEE
T ss_pred EEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEE
Confidence 8876632 1 111 2 4577888889999988776
No 465
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=26.59 E-value=1.1e+02 Score=23.27 Aligned_cols=64 Identities=11% Similarity=0.211 Sum_probs=34.8
Q ss_pred CCCeEEEECCcc-h-HHHHHhc---CceEEEecCCCCCcEEEccCCCCCCCCCceeEEEEcccccCCCHHHHHHHHHHcc
Q 027441 141 PSLVIADFGCGD-A-RLAKSVK---NKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVL 215 (223)
Q Consensus 141 ~~~~ILDiGcG~-G-~~a~~la---~~v~gvDis~~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l~e~~rvL 215 (223)
...+|.=||+|. | .++..|+ .+|+.+|.++. .-...|+|+.+.-.. ....++.++...+
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~--------------~~~~aD~vi~av~~~--~~~~v~~~l~~~~ 81 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ--------------ATTLGEIVIMAVPYP--ALAALAKQYATQL 81 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC--------------CSSCCSEEEECSCHH--HHHHHHHHTHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH--------------HhccCCEEEEcCCcH--HHHHHHHHHHHhc
Confidence 346799999886 2 2444444 36888887654 113457777655411 1234555555555
Q ss_pred CCCCEE
Q 027441 216 KPRGEE 221 (223)
Q Consensus 216 kpgG~l 221 (223)
+ +.++
T Consensus 82 ~-~~~v 86 (209)
T 2raf_A 82 K-GKIV 86 (209)
T ss_dssp T-TSEE
T ss_pred C-CCEE
Confidence 5 4443
No 466
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=26.00 E-value=21 Score=30.01 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=43.0
Q ss_pred CCCeEEEECCcc-hH-HHHHhc---CceEEEecCCCCCcE----EE-ccCCCCCCCCCceeEEEEccccc----CCCHHH
Q 027441 141 PSLVIADFGCGD-AR-LAKSVK---NKVFSFDLVSNDPSV----IA-CDMSNTPLNSSSVDVAVFCLSLM----GINFPN 206 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~-~a~~la---~~v~gvDis~~~~~~----~~-~d~~~lp~~~~sfD~Vi~~~~l~----~~d~~~ 206 (223)
.+.+|.=||+|. |. ++..+. .+|+++|.++..... .. .++..+ -...|+|+.+.-+. |+
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~el---l~~aDvV~l~lPlt~~t~~l---- 208 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADA---LATANFIVNALPLTPTTHHL---- 208 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHH---HHHCSEEEECCCCCGGGTTC----
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHH---HhhCCEEEEcCCCchHHHHh----
Confidence 467899999986 32 344333 589999988643211 11 111111 13468888766542 22
Q ss_pred HHHHHHHccCCCCEEE
Q 027441 207 YLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 207 ~l~e~~rvLkpgG~lv 222 (223)
+-.+....|+||.+|+
T Consensus 209 i~~~~l~~mk~gailI 224 (324)
T 3evt_A 209 FSTELFQQTKQQPMLI 224 (324)
T ss_dssp BSHHHHHTCCSCCEEE
T ss_pred cCHHHHhcCCCCCEEE
Confidence 1134566789998876
No 467
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=25.98 E-value=30 Score=28.68 Aligned_cols=78 Identities=15% Similarity=0.067 Sum_probs=42.3
Q ss_pred CCCeEEEECCcc-hH-HHHHhc---CceEEEecCCCCCcEEEccCCCCCCCCCceeEEEEcccccCCCHHHHH-HHHHHc
Q 027441 141 PSLVIADFGCGD-AR-LAKSVK---NKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYL-QEAQRV 214 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~-~a~~la---~~v~gvDis~~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l-~e~~rv 214 (223)
.+.+|.=||+|. |. ++..+. .+|+++|.++.... .....+.---...|+|+.+..+... ...++ .+....
T Consensus 143 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~l~ell~~aDvV~l~~p~~~~-t~~li~~~~l~~ 218 (311)
T 2cuk_A 143 QGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP---YPFLSLEELLKEADVVSLHTPLTPE-THRLLNRERLFA 218 (311)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS---SCBCCHHHHHHHCSEEEECCCCCTT-TTTCBCHHHHTT
T ss_pred CCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc---cccCCHHHHHhhCCEEEEeCCCChH-HHhhcCHHHHhh
Confidence 567899999885 22 333333 47999998875443 1111111001246888877544310 00111 134457
Q ss_pred cCCCCEEE
Q 027441 215 LKPRGEEQ 222 (223)
Q Consensus 215 LkpgG~lv 222 (223)
|+||++|+
T Consensus 219 mk~ga~li 226 (311)
T 2cuk_A 219 MKRGAILL 226 (311)
T ss_dssp SCTTCEEE
T ss_pred CCCCcEEE
Confidence 89988875
No 468
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=25.46 E-value=2e+02 Score=22.86 Aligned_cols=61 Identities=11% Similarity=0.139 Sum_probs=41.8
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC------------CCCcEEEccCCCCC-----CCCCceeEEEEcc
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS------------NDPSVIACDMSNTP-----LNSSSVDVAVFCL 197 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~------------~~~~~~~~d~~~lp-----~~~~sfD~Vi~~~ 197 (223)
.+.++|=-|.+.|. .+..|+ .+|+.+|... .+..++.+|+.+.. +..+.+|+++.+.
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA 87 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA 87 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence 46788888888876 344454 5788888775 34567788885532 3457799999877
Q ss_pred cccC
Q 027441 198 SLMG 201 (223)
Q Consensus 198 ~l~~ 201 (223)
.+.+
T Consensus 88 Gi~~ 91 (247)
T 4hp8_A 88 GIIR 91 (247)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 469
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=24.89 E-value=41 Score=27.42 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=43.9
Q ss_pred CCCeEEEECCcchH--HHHHhc---CceEEEecCCCCCc------EEEccCCCCCCCCCceeEEEEcccccCCCHHHHHH
Q 027441 141 PSLVIADFGCGDAR--LAKSVK---NKVFSFDLVSNDPS------VIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQ 209 (223)
Q Consensus 141 ~~~~ILDiGcG~G~--~a~~la---~~v~gvDis~~~~~------~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l~ 209 (223)
.+.+|+=||+|.-. .+..+. .+|+++|.++.... +...+...+.-.-...|+|+.+...+-++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~----- 230 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMILNQ----- 230 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCCBCH-----
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhhhCH-----
Confidence 57899999998632 222222 47999998752211 111111111100145799998877644453
Q ss_pred HHHHccCCCCEEE
Q 027441 210 EAQRVLKPRGEEQ 222 (223)
Q Consensus 210 e~~rvLkpgG~lv 222 (223)
+....++||++|+
T Consensus 231 ~~~~~mk~g~~li 243 (300)
T 2rir_A 231 TVLSSMTPKTLIL 243 (300)
T ss_dssp HHHTTSCTTCEEE
T ss_pred HHHHhCCCCCEEE
Confidence 2446789998875
No 470
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=24.86 E-value=1.1e+02 Score=24.16 Aligned_cols=82 Identities=16% Similarity=0.123 Sum_probs=48.5
Q ss_pred CCCeEEEECCcchH---HHHHhc---CceEEEecCC---------------CCCcEEEccCCCCC-----CC-----CCc
Q 027441 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP-----LN-----SSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la---~~v~gvDis~---------------~~~~~~~~d~~~lp-----~~-----~~s 189 (223)
.+.+||=.|++.|. ++..|+ .+|+.++.+. .++.++.+|+.+.. +. -+.
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 107 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 107 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45678888877664 333333 4687777654 23556677876532 00 136
Q ss_pred eeEEEEcccccCC------CHH--------------HHHHHHHHccCCCCEEE
Q 027441 190 VDVAVFCLSLMGI------NFP--------------NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 190 fD~Vi~~~~l~~~------d~~--------------~~l~e~~rvLkpgG~lv 222 (223)
+|++|.+..+... +.. .++..+.+.|+.+|.++
T Consensus 108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 160 (283)
T 1g0o_A 108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLI 160 (283)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEE
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEE
Confidence 8999987765432 111 34566667776777776
No 471
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=24.85 E-value=1.8e+02 Score=25.39 Aligned_cols=58 Identities=17% Similarity=0.108 Sum_probs=37.3
Q ss_pred CCeEEEECCcchHHHHHhc-------CceEEEecCCCCCcEEEccCCCCC-CCCCceeEEEEccccc
Q 027441 142 SLVIADFGCGDARLAKSVK-------NKVFSFDLVSNDPSVIACDMSNTP-LNSSSVDVAVFCLSLM 200 (223)
Q Consensus 142 ~~~ILDiGcG~G~~a~~la-------~~v~gvDis~~~~~~~~~d~~~lp-~~~~sfD~Vi~~~~l~ 200 (223)
..+||=.| |+|.++..++ .+|++++-++.....+.+|+.+.. -.-..+|+||.+....
T Consensus 147 ~m~VLVTG-atG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~~ 212 (516)
T 3oh8_A 147 PLTVAITG-SRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEP 212 (516)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC-
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCCc
Confidence 56899888 4455544443 479999988766666777765421 1124689999776654
No 472
>3g2e_A OORC subunit of 2-oxoglutarate:acceptor oxidoredu; structural genomics, PSI-2, protein structure initiative; 2.00A {Campylobacter jejuni}
Probab=24.50 E-value=74 Score=24.33 Aligned_cols=29 Identities=14% Similarity=0.090 Sum_probs=21.6
Q ss_pred CceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
+..|++++... .. +......|+|||++++
T Consensus 69 g~~D~lv~~d~------~~-~~~~~~~l~~gg~vi~ 97 (194)
T 3g2e_A 69 GEVDFMLSTAD------KG-YKGFRGGVKEGGIIVV 97 (194)
T ss_dssp TCEEEEEECCH------HH-HHHHGGGEEEEEEEEE
T ss_pred CCCCEEEEcCH------HH-HHHHHhccCCCeEEEE
Confidence 47999998664 33 3456778999999875
No 473
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=23.71 E-value=2.2e+02 Score=22.92 Aligned_cols=57 Identities=16% Similarity=0.040 Sum_probs=35.6
Q ss_pred CCCeEEEECCcchHHHHHhc-------CceEEEecCC-------------CCCcEEEccCCCCCCCCCceeEEEEccccc
Q 027441 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la-------~~v~gvDis~-------------~~~~~~~~d~~~lp~~~~sfD~Vi~~~~l~ 200 (223)
...+||=.|+ +|.++..++ ..|++++-.. ..+.++.+|+.+..+ ..+|+|+.+....
T Consensus 26 ~~~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~~d~vih~A~~~ 102 (343)
T 2b69_A 26 DRKRILITGG-AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLY--IEVDQIYHLASPA 102 (343)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCC--CCCSEEEECCSCC
T ss_pred CCCEEEEEcC-ccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhh--cCCCEEEECcccc
Confidence 4578998885 455444443 4688887542 235667778765443 3589999776654
No 474
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=23.44 E-value=1.7e+02 Score=22.96 Aligned_cols=60 Identities=18% Similarity=0.141 Sum_probs=36.5
Q ss_pred CCCeEEEECCc--chH---HHHHhc---CceEEEecCCC-------------CCcEEEccCCCCC-----C-----CCCc
Q 027441 141 PSLVIADFGCG--DAR---LAKSVK---NKVFSFDLVSN-------------DPSVIACDMSNTP-----L-----NSSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG--~G~---~a~~la---~~v~gvDis~~-------------~~~~~~~d~~~lp-----~-----~~~s 189 (223)
.+.+||=.|++ .|. ++..|+ .+|+.++.++. .+.++.+|+.+.. + ..+.
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 84 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35678888975 332 333343 46888876642 3567778886632 0 0246
Q ss_pred eeEEEEccccc
Q 027441 190 VDVAVFCLSLM 200 (223)
Q Consensus 190 fD~Vi~~~~l~ 200 (223)
+|++|.+..+.
T Consensus 85 id~lv~nAg~~ 95 (275)
T 2pd4_A 85 LDFIVHSVAFA 95 (275)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEECCccC
Confidence 89999876543
No 475
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=23.06 E-value=1.9e+02 Score=25.25 Aligned_cols=74 Identities=12% Similarity=0.156 Sum_probs=42.3
Q ss_pred CCCeEEEECCcchH--HHHHhc---CceEEEecCCCCC------cEEEccCCCCCCCCCceeEEEEcccccCC-CHHHHH
Q 027441 141 PSLVIADFGCGDAR--LAKSVK---NKVFSFDLVSNDP------SVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYL 208 (223)
Q Consensus 141 ~~~~ILDiGcG~G~--~a~~la---~~v~gvDis~~~~------~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~-d~~~~l 208 (223)
.+.+|+=+|+|.=. .+..+. .+|+++|+++... .+...++..+ -...|+|+.+..-.++ +
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leea---l~~ADIVi~atgt~~lI~----- 290 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEV---IRQVDIVITCTGNKNVVT----- 290 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHH---TTTCSEEEECSSCSCSBC-----
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHH---HhcCCEEEECCCCcccCC-----
Confidence 67899999999732 222222 5899999876211 1111222111 1346998886332332 2
Q ss_pred HHHHHccCCCCEEE
Q 027441 209 QEAQRVLKPRGEEQ 222 (223)
Q Consensus 209 ~e~~rvLkpgG~lv 222 (223)
.+....+|||++|+
T Consensus 291 ~e~l~~MK~gailI 304 (435)
T 3gvp_A 291 REHLDRMKNSCIVC 304 (435)
T ss_dssp HHHHHHSCTTEEEE
T ss_pred HHHHHhcCCCcEEE
Confidence 24556789998876
No 476
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=22.85 E-value=54 Score=28.66 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=21.2
Q ss_pred ceeEEEEcccccC-C------C---HHHHHHHHHHccCCCCEEE
Q 027441 189 SVDVAVFCLSLMG-I------N---FPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 189 sfD~Vi~~~~l~~-~------d---~~~~l~e~~rvLkpgG~lv 222 (223)
..|+|+.+-.-.. . | ...+...+...|+||.+++
T Consensus 83 ~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV 126 (431)
T 3ojo_A 83 ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTII 126 (431)
T ss_dssp CCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEE
T ss_pred hCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEE
Confidence 4677776543221 1 2 3466778888899887665
No 477
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=22.45 E-value=1.6e+02 Score=22.21 Aligned_cols=75 Identities=13% Similarity=-0.024 Sum_probs=41.3
Q ss_pred eEEEECCcchHHHHHhc-------CceEEEecCC---------CCCcEEEccCCCCC----CCCCceeEEEEcccccCCC
Q 027441 144 VIADFGCGDARLAKSVK-------NKVFSFDLVS---------NDPSVIACDMSNTP----LNSSSVDVAVFCLSLMGIN 203 (223)
Q Consensus 144 ~ILDiGcG~G~~a~~la-------~~v~gvDis~---------~~~~~~~~d~~~lp----~~~~sfD~Vi~~~~l~~~d 203 (223)
+|+=+|+| .++..++ ..|+++|.++ ....++.+|..+.. ..-..+|+|+++..-. .
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d--~ 77 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD--E 77 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH--H
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc--H
Confidence 46667764 4444433 4789999876 24567778876532 1124578888765421 1
Q ss_pred HHHHHHHHHHccCCCCEEE
Q 027441 204 FPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 204 ~~~~l~e~~rvLkpgG~lv 222 (223)
...++..+.+.+.|...++
T Consensus 78 ~n~~~~~~a~~~~~~~~ii 96 (218)
T 3l4b_C 78 VNLFIAQLVMKDFGVKRVV 96 (218)
T ss_dssp HHHHHHHHHHHTSCCCEEE
T ss_pred HHHHHHHHHHHHcCCCeEE
Confidence 1234444555555554443
No 478
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.24 E-value=82 Score=24.14 Aligned_cols=59 Identities=24% Similarity=0.208 Sum_probs=35.3
Q ss_pred CCeEEEECCcchH---HHHHhc---CceEEEecCCCC----CcEEEccCCCCC-----C-------CCCceeEEEEcccc
Q 027441 142 SLVIADFGCGDAR---LAKSVK---NKVFSFDLVSND----PSVIACDMSNTP-----L-------NSSSVDVAVFCLSL 199 (223)
Q Consensus 142 ~~~ILDiGcG~G~---~a~~la---~~v~gvDis~~~----~~~~~~d~~~lp-----~-------~~~sfD~Vi~~~~l 199 (223)
+.+||=.|++.|. ++..|+ .+|++++.++.. ..++.+|+.+.. + ..+.+|++|.+..+
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~ 82 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGG 82 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcc
Confidence 4568888877664 333343 368888877633 234556664421 0 11579999988765
Q ss_pred c
Q 027441 200 M 200 (223)
Q Consensus 200 ~ 200 (223)
.
T Consensus 83 ~ 83 (236)
T 1ooe_A 83 W 83 (236)
T ss_dssp C
T ss_pred c
Confidence 3
No 479
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=22.18 E-value=2.1e+02 Score=22.74 Aligned_cols=82 Identities=11% Similarity=0.121 Sum_probs=50.9
Q ss_pred CCCeEEEECCcc--hH---HHHHhc---CceEEEecCC-------------CCCcEEEccCCCCC-----C-----CCCc
Q 027441 141 PSLVIADFGCGD--AR---LAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTP-----L-----NSSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~--G~---~a~~la---~~v~gvDis~-------------~~~~~~~~d~~~lp-----~-----~~~s 189 (223)
.+.+||=.|++. |. ++..|+ .+|+.++.++ ..+.++.+|+.+.. + ..+.
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK 109 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 567899999763 33 344444 4688777663 34567788886632 0 0246
Q ss_pred eeEEEEcccccC----------CCHH--------------HHHHHHHHccCCCCEEE
Q 027441 190 VDVAVFCLSLMG----------INFP--------------NYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 190 fD~Vi~~~~l~~----------~d~~--------------~~l~e~~rvLkpgG~lv 222 (223)
+|++|.+..+.. .+.. .++..+.+.++.+|.++
T Consensus 110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv 166 (293)
T 3grk_A 110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSIL 166 (293)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEE
Confidence 899998766542 1111 45566677777788776
No 480
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.96 E-value=2.3e+02 Score=20.49 Aligned_cols=79 Identities=10% Similarity=0.183 Sum_probs=43.9
Q ss_pred CCeEEEECCcc-hH-HHHHhc----CceEEEecCC--------CCCcEEEccCCCCC----C-CCCceeEEEEcccccCC
Q 027441 142 SLVIADFGCGD-AR-LAKSVK----NKVFSFDLVS--------NDPSVIACDMSNTP----L-NSSSVDVAVFCLSLMGI 202 (223)
Q Consensus 142 ~~~ILDiGcG~-G~-~a~~la----~~v~gvDis~--------~~~~~~~~d~~~lp----~-~~~sfD~Vi~~~~l~~~ 202 (223)
+.+|+=+|||. |. ++..|. ..|+++|.++ ..+.++.+|..+.. . .-..+|+|+.+..-.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~-- 116 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH-- 116 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH--
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh--
Confidence 46799999985 32 333332 3689999886 24456667765421 1 124589888754311
Q ss_pred CHHHHHHHHHHccCCCCEEE
Q 027441 203 NFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 203 d~~~~l~e~~rvLkpgG~lv 222 (223)
.....+..+.+.+.|++.++
T Consensus 117 ~~~~~~~~~~~~~~~~~~ii 136 (183)
T 3c85_A 117 QGNQTALEQLQRRNYKGQIA 136 (183)
T ss_dssp HHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHHHHHHCCCCEEE
Confidence 11122333455566666654
No 481
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=21.94 E-value=27 Score=26.86 Aligned_cols=13 Identities=8% Similarity=0.031 Sum_probs=5.9
Q ss_pred ECCcchHHHHHhc
Q 027441 148 FGCGDARLAKSVK 160 (223)
Q Consensus 148 iGcG~G~~a~~la 160 (223)
+.||||.-....+
T Consensus 87 liCGTGiG~sIaA 99 (179)
T 3k7p_A 87 LAAGSGIGMSIAA 99 (179)
T ss_dssp EEESSSHHHHHHH
T ss_pred EEccCcHHHhhHh
Confidence 3455554433333
No 482
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=21.90 E-value=1.8e+02 Score=22.69 Aligned_cols=63 Identities=14% Similarity=0.170 Sum_probs=38.8
Q ss_pred CeEEEECCcchH---HHHHhc---CceEEEecCC-----CCCcEEEccCCCCCC-C--CCceeEEEEcccccCC-CHH
Q 027441 143 LVIADFGCGDAR---LAKSVK---NKVFSFDLVS-----NDPSVIACDMSNTPL-N--SSSVDVAVFCLSLMGI-NFP 205 (223)
Q Consensus 143 ~~ILDiGcG~G~---~a~~la---~~v~gvDis~-----~~~~~~~~d~~~lp~-~--~~sfD~Vi~~~~l~~~-d~~ 205 (223)
.+||=.|++.|. ++..|+ .+|+++|.++ ..+.++.+|+.+..- . -..+|+||.+...... ++.
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~~~ 81 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKPFE 81 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCCHH
Confidence 467778865443 233333 3688888876 356778888876320 0 1258999988776544 444
No 483
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=21.87 E-value=1.7e+02 Score=23.83 Aligned_cols=78 Identities=12% Similarity=0.109 Sum_probs=43.7
Q ss_pred CeEEEECCcch--HHHHHhc---CceEEEecCCC------CCcEEE---cc-----C---CCCCCCCCceeEEEEccccc
Q 027441 143 LVIADFGCGDA--RLAKSVK---NKVFSFDLVSN------DPSVIA---CD-----M---SNTPLNSSSVDVAVFCLSLM 200 (223)
Q Consensus 143 ~~ILDiGcG~G--~~a~~la---~~v~gvDis~~------~~~~~~---~d-----~---~~lp~~~~sfD~Vi~~~~l~ 200 (223)
.+|+=||+|.= .++..|+ ..|+.++-++. .+.+.. ++ + .+..-....+|+|+.+--.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~~ 82 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKVV 82 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCCC
Confidence 46888898862 3444454 36888776541 000100 00 0 00000113689999877655
Q ss_pred CCCHHHHHHHHHHccCCCCEEE
Q 027441 201 GINFPNYLQEAQRVLKPRGEEQ 222 (223)
Q Consensus 201 ~~d~~~~l~e~~rvLkpgG~lv 222 (223)
.+ ..++..+...|.|+..++
T Consensus 83 ~~--~~~l~~l~~~l~~~t~Iv 102 (320)
T 3i83_A 83 EG--ADRVGLLRDAVAPDTGIV 102 (320)
T ss_dssp TT--CCHHHHHTTSCCTTCEEE
T ss_pred Ch--HHHHHHHHhhcCCCCEEE
Confidence 54 257788888888887665
No 484
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=21.50 E-value=26 Score=29.04 Aligned_cols=19 Identities=26% Similarity=0.614 Sum_probs=16.8
Q ss_pred HHHHHHHHHccCCCCEEEc
Q 027441 205 PNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 205 ~~~l~e~~rvLkpgG~lvi 223 (223)
..+|..+..+|+|||.|+|
T Consensus 225 ~~~l~~~~~~l~~ggr~~v 243 (301)
T 1m6y_A 225 KEFLKKAEDLLNPGGRIVV 243 (301)
T ss_dssp HHHHHHGGGGEEEEEEEEE
T ss_pred HHHHHHHHHhhCCCCEEEE
Confidence 4888999999999999975
No 485
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=21.41 E-value=76 Score=25.61 Aligned_cols=78 Identities=9% Similarity=0.071 Sum_probs=43.6
Q ss_pred CeEEEECCcc-h-HHHHHhc---CceEEEecCCCCCcEEEccC------CCCCCC--CCceeEEEEcccccCCCHHHHHH
Q 027441 143 LVIADFGCGD-A-RLAKSVK---NKVFSFDLVSNDPSVIACDM------SNTPLN--SSSVDVAVFCLSLMGINFPNYLQ 209 (223)
Q Consensus 143 ~~ILDiGcG~-G-~~a~~la---~~v~gvDis~~~~~~~~~d~------~~lp~~--~~sfD~Vi~~~~l~~~d~~~~l~ 209 (223)
.+|+=||+|. | .++..|+ ..|+.++-++..+.....+- ...+.. ...+|+|+.+--.+ +...++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~--~~~~~l~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH--QLDAVIP 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG--GHHHHGG
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc--CHHHHHH
Confidence 3588889985 2 3444454 46888877653222211000 000011 25689998765433 4467778
Q ss_pred HHHHccCCCCEEE
Q 027441 210 EAQRVLKPRGEEQ 222 (223)
Q Consensus 210 e~~rvLkpgG~lv 222 (223)
++...+.|+..++
T Consensus 81 ~l~~~l~~~~~iv 93 (294)
T 3g17_A 81 HLTYLAHEDTLII 93 (294)
T ss_dssp GHHHHEEEEEEEE
T ss_pred HHHHhhCCCCEEE
Confidence 8888887776654
No 486
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=21.33 E-value=57 Score=27.34 Aligned_cols=58 Identities=21% Similarity=0.269 Sum_probs=34.6
Q ss_pred CCCeEEEECCcc-hH-HHHHhc--CceEEEecCC-------CCCcEEEccCCCCC-CC--CCceeEEEEccc
Q 027441 141 PSLVIADFGCGD-AR-LAKSVK--NKVFSFDLVS-------NDPSVIACDMSNTP-LN--SSSVDVAVFCLS 198 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~-~a~~la--~~v~gvDis~-------~~~~~~~~d~~~lp-~~--~~sfD~Vi~~~~ 198 (223)
...+||=||||. |. .+..|+ ..|+..|.+. ..+..+..|+.+.. +. -..+|+|+++..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p 86 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALP 86 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecC
Confidence 457899999963 43 333444 4677788775 34455666765432 00 135799987754
No 487
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=21.30 E-value=1e+02 Score=25.75 Aligned_cols=30 Identities=10% Similarity=0.121 Sum_probs=24.1
Q ss_pred CCCeEEEECCcchHHHHHhcC---------ceEEEecCC
Q 027441 141 PSLVIADFGCGDARLAKSVKN---------KVFSFDLVS 170 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la~---------~v~gvDis~ 170 (223)
.+..|+=+|||.|.....|+. +.+.+|..+
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap 98 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRH 98 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCc
Confidence 357999999999998887761 567888865
No 488
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=21.27 E-value=69 Score=25.93 Aligned_cols=77 Identities=14% Similarity=0.078 Sum_probs=43.0
Q ss_pred CCCeEEEECCcchH--HHHHhc---CceEEEecCCCCCc------EEEccCCCCCCCCCceeEEEEcccccCCCHHHHHH
Q 027441 141 PSLVIADFGCGDAR--LAKSVK---NKVFSFDLVSNDPS------VIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQ 209 (223)
Q Consensus 141 ~~~~ILDiGcG~G~--~a~~la---~~v~gvDis~~~~~------~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l~ 209 (223)
.+.+|+=||+|.-. .+..+. .+|+++|.++.... ....+...+.-.-...|+|+.+...+-++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~----- 228 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALVVTA----- 228 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCCBCH-----
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHHhCH-----
Confidence 57899999998632 222222 47999998752211 011111111100145799998776543344
Q ss_pred HHHHccCCCCEEE
Q 027441 210 EAQRVLKPRGEEQ 222 (223)
Q Consensus 210 e~~rvLkpgG~lv 222 (223)
+....++||++|+
T Consensus 229 ~~l~~mk~~~~li 241 (293)
T 3d4o_A 229 NVLAEMPSHTFVI 241 (293)
T ss_dssp HHHHHSCTTCEEE
T ss_pred HHHHhcCCCCEEE
Confidence 2345689999876
No 489
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=20.99 E-value=14 Score=31.64 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=42.6
Q ss_pred CCCeEEEECCcc-hH-HHHHhc---CceEEEecCCCCC-----cEEEccCCCCCCCCCceeEEEEcccccCCCHHHHHHH
Q 027441 141 PSLVIADFGCGD-AR-LAKSVK---NKVFSFDLVSNDP-----SVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQE 210 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~-~a~~la---~~v~gvDis~~~~-----~~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l~e 210 (223)
.+.+|.=||.|. |. ++..+. .+|+++|.+.... .+...++..+ -...|+|+....+.--....+-.+
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~el---l~~aDvV~l~~Plt~~T~~li~~~ 251 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDV---LTKSDFIFVVAAVTSENKRFLGAE 251 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHH---HHSCSEEEECSCSSCC---CCCHH
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHH---HhcCCEEEEcCcCCHHHHhhcCHH
Confidence 467899999986 32 344443 4799999874211 0111111111 134688887655431111111245
Q ss_pred HHHccCCCCEEE
Q 027441 211 AQRVLKPRGEEQ 222 (223)
Q Consensus 211 ~~rvLkpgG~lv 222 (223)
....||||++|+
T Consensus 252 ~l~~mk~gailI 263 (365)
T 4hy3_A 252 AFSSMRRGAAFI 263 (365)
T ss_dssp HHHTSCTTCEEE
T ss_pred HHhcCCCCcEEE
Confidence 667789999886
No 490
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=20.89 E-value=1.1e+02 Score=25.34 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=21.8
Q ss_pred CceeEEEEcccccCCCHHHHHHHHHHccCCCCEEEc
Q 027441 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPRGEEQI 223 (223)
Q Consensus 188 ~sfD~Vi~~~~l~~~d~~~~l~e~~rvLkpgG~lvi 223 (223)
..+|+|+-+-.- +.+. .+.++|+++|.+++
T Consensus 244 ~g~Dvvid~~G~-----~~~~-~~~~~l~~~G~~v~ 273 (364)
T 1gu7_A 244 GEAKLALNCVGG-----KSST-GIARKLNNNGLMLT 273 (364)
T ss_dssp CCEEEEEESSCH-----HHHH-HHHHTSCTTCEEEE
T ss_pred CCceEEEECCCc-----hhHH-HHHHHhccCCEEEE
Confidence 469999866551 3334 77899999999873
No 491
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=20.59 E-value=47 Score=27.07 Aligned_cols=60 Identities=15% Similarity=0.185 Sum_probs=35.8
Q ss_pred CCCeEEEECCcchHHHHHhc---------CceEEEecCC--------------CCCcEEEccCCCCC-----CCCCceeE
Q 027441 141 PSLVIADFGCGDARLAKSVK---------NKVFSFDLVS--------------NDPSVIACDMSNTP-----LNSSSVDV 192 (223)
Q Consensus 141 ~~~~ILDiGcG~G~~a~~la---------~~v~gvDis~--------------~~~~~~~~d~~~lp-----~~~~sfD~ 192 (223)
...+||=.|+ +|.++..++ ..|+++|... ..+.++.+|+.+.. +....+|+
T Consensus 23 ~~~~vlVtGa-tG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 23 NAMNILVTGG-AGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp -CEEEEEETT-TSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred CCCeEEEECC-ccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 4567998885 455444433 2567777553 35667888886632 11224899
Q ss_pred EEEcccccC
Q 027441 193 AVFCLSLMG 201 (223)
Q Consensus 193 Vi~~~~l~~ 201 (223)
|+.+.+..+
T Consensus 102 Vih~A~~~~ 110 (346)
T 4egb_A 102 IVNFAAESH 110 (346)
T ss_dssp EEECCCCC-
T ss_pred EEECCcccc
Confidence 997776554
No 492
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=20.41 E-value=1.3e+02 Score=20.41 Aligned_cols=76 Identities=12% Similarity=0.194 Sum_probs=38.7
Q ss_pred CCeEEEECCcc-hH-HHHHhc---CceEEEecCC--------CCCcEEEccCCCCC----CCCCceeEEEEcccccCCCH
Q 027441 142 SLVIADFGCGD-AR-LAKSVK---NKVFSFDLVS--------NDPSVIACDMSNTP----LNSSSVDVAVFCLSLMGINF 204 (223)
Q Consensus 142 ~~~ILDiGcG~-G~-~a~~la---~~v~gvDis~--------~~~~~~~~d~~~lp----~~~~sfD~Vi~~~~l~~~d~ 204 (223)
..+|+=+|+|. |. ++..|. ..|+++|.++ ....++.+|..+.. ..-..+|+|+.+.... .+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~-~~~ 84 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN-IQA 84 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC-HHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc-hHH
Confidence 35689999854 22 222232 4688888764 12344556654321 1124689988765421 011
Q ss_pred HHHHHHHHHccCCC
Q 027441 205 PNYLQEAQRVLKPR 218 (223)
Q Consensus 205 ~~~l~e~~rvLkpg 218 (223)
...+....+.+.+.
T Consensus 85 ~~~~~~~~~~~~~~ 98 (144)
T 2hmt_A 85 STLTTLLLKELDIP 98 (144)
T ss_dssp HHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCC
Confidence 22344444445554
No 493
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=20.32 E-value=2.2e+02 Score=22.99 Aligned_cols=61 Identities=16% Similarity=0.190 Sum_probs=35.5
Q ss_pred CeEEEECCcchHHHHHhc------C------ceEEEecCCC-------CCcEEEccCCCCC-----CCCC-ceeEEEEcc
Q 027441 143 LVIADFGCGDARLAKSVK------N------KVFSFDLVSN-------DPSVIACDMSNTP-----LNSS-SVDVAVFCL 197 (223)
Q Consensus 143 ~~ILDiGcG~G~~a~~la------~------~v~gvDis~~-------~~~~~~~d~~~lp-----~~~~-sfD~Vi~~~ 197 (223)
.+||=.| |+|.++..+. . +|++++-++. .+.++.+|+.+.. +... .+|+|+.+.
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a 80 (364)
T 2v6g_A 2 SVALIVG-VTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT 80 (364)
T ss_dssp EEEEEET-TTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred CEEEEEC-CCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence 3577677 4455544432 3 4778876642 4667888886532 2222 289998876
Q ss_pred cccCCCH
Q 027441 198 SLMGINF 204 (223)
Q Consensus 198 ~l~~~d~ 204 (223)
.....++
T Consensus 81 ~~~~~~~ 87 (364)
T 2v6g_A 81 WANRSTE 87 (364)
T ss_dssp CCCCSSH
T ss_pred CCCcchH
Confidence 6544333
No 494
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=20.27 E-value=22 Score=30.02 Aligned_cols=78 Identities=14% Similarity=0.126 Sum_probs=43.0
Q ss_pred CCCeEEEECCcc-hH-HHHHhc---CceEEEecCCCCCc-----EEEccCCCCCCCCCceeEEEEcccccCCCHHHHH-H
Q 027441 141 PSLVIADFGCGD-AR-LAKSVK---NKVFSFDLVSNDPS-----VIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYL-Q 209 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~-~a~~la---~~v~gvDis~~~~~-----~~~~d~~~lp~~~~sfD~Vi~~~~l~~~d~~~~l-~ 209 (223)
.+.+|.=||+|. |. ++..+. .+|+++|.++.... +...++..+ -...|+|+.+..+... -..++ .
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~el---l~~aDvV~l~~P~t~~-t~~li~~ 239 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEI---WPLCDFITVHTPLLPS-TTGLLND 239 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHH---GGGCSEEEECCCCCTT-TTTSBCH
T ss_pred CcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeCCHHHH---HhcCCEEEEecCCCHH-HHHhhCH
Confidence 567899999985 32 344443 47999998753210 111111110 1356888877654311 00111 3
Q ss_pred HHHHccCCCCEEE
Q 027441 210 EAQRVLKPRGEEQ 222 (223)
Q Consensus 210 e~~rvLkpgG~lv 222 (223)
+....|+||++|+
T Consensus 240 ~~l~~mk~gailI 252 (335)
T 2g76_A 240 NTFAQCKKGVRVV 252 (335)
T ss_dssp HHHTTSCTTEEEE
T ss_pred HHHhhCCCCcEEE
Confidence 5667789998876
No 495
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=20.17 E-value=75 Score=26.15 Aligned_cols=77 Identities=14% Similarity=0.092 Sum_probs=42.4
Q ss_pred CCCeEEEECCcc-hH-HHHHhc---CceEEEecCCCCCcEEEccCCCCCCC--CCceeEEEEcccccCCCHHHHH-HHHH
Q 027441 141 PSLVIADFGCGD-AR-LAKSVK---NKVFSFDLVSNDPSVIACDMSNTPLN--SSSVDVAVFCLSLMGINFPNYL-QEAQ 212 (223)
Q Consensus 141 ~~~~ILDiGcG~-G~-~a~~la---~~v~gvDis~~~~~~~~~d~~~lp~~--~~sfD~Vi~~~~l~~~d~~~~l-~e~~ 212 (223)
.+.+|.=||+|. |. ++..+. .+|+++|.++. .. +......+. -...|+|+.+..+.-. -..++ .+..
T Consensus 123 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~---~~~~~~~l~ell~~aDvV~l~~P~~~~-t~~~i~~~~l 197 (303)
T 1qp8_A 123 QGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EG---PWRFTNSLEEALREARAAVCALPLNKH-TRGLVKYQHL 197 (303)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CS---SSCCBSCSHHHHTTCSEEEECCCCSTT-TTTCBCHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-cc---CcccCCCHHHHHhhCCEEEEeCcCchH-HHHHhCHHHH
Confidence 567899999886 32 343333 47999998765 11 100001111 1356998877654311 00111 2456
Q ss_pred HccCCCCEEE
Q 027441 213 RVLKPRGEEQ 222 (223)
Q Consensus 213 rvLkpgG~lv 222 (223)
..|+||.+|+
T Consensus 198 ~~mk~gaili 207 (303)
T 1qp8_A 198 ALMAEDAVFV 207 (303)
T ss_dssp TTSCTTCEEE
T ss_pred hhCCCCCEEE
Confidence 7789998875
No 496
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=20.08 E-value=82 Score=24.37 Aligned_cols=60 Identities=13% Similarity=0.060 Sum_probs=35.1
Q ss_pred CCCeEEEECCcchH---HHHHhc----CceEEEecCC--------------CCCcEEEccCCCCCC-----C-----CCc
Q 027441 141 PSLVIADFGCGDAR---LAKSVK----NKVFSFDLVS--------------NDPSVIACDMSNTPL-----N-----SSS 189 (223)
Q Consensus 141 ~~~~ILDiGcG~G~---~a~~la----~~v~gvDis~--------------~~~~~~~~d~~~lp~-----~-----~~s 189 (223)
.+.+||=.|++.|. ++..|+ .+|+.++-+. ..+.++.+|+.+..- . .+.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 35678877765543 222332 3577777653 256778888876320 0 136
Q ss_pred eeEEEEccccc
Q 027441 190 VDVAVFCLSLM 200 (223)
Q Consensus 190 fD~Vi~~~~l~ 200 (223)
+|+||.+....
T Consensus 83 id~li~~Ag~~ 93 (276)
T 1wma_A 83 LDVLVNNAGIA 93 (276)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEECCccc
Confidence 89999776544
Done!