Query 027446
Match_columns 223
No_of_seqs 151 out of 185
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 16:49:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027446.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027446hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ct1_A Transcriptional repress 97.5 4.5E-05 1.5E-09 52.6 2.9 54 44-97 15-71 (77)
2 2drp_A Protein (tramtrack DNA- 97.5 5E-05 1.7E-09 50.6 2.6 54 43-96 9-65 (66)
3 3uk3_C Zinc finger protein 217 96.9 0.00034 1.2E-08 45.0 1.6 51 44-96 4-57 (57)
4 2yt9_A Zinc finger-containing 96.9 0.00067 2.3E-08 47.8 3.3 51 44-96 7-60 (95)
5 1x5w_A Zinc finger protein 64, 96.8 0.00059 2E-08 46.0 2.5 53 43-97 8-63 (70)
6 1x6h_A Transcriptional repress 96.8 0.00081 2.8E-08 46.4 3.0 54 44-97 15-73 (86)
7 1bbo_A Human enhancer-binding 96.7 0.001 3.5E-08 42.7 2.8 50 45-96 2-54 (57)
8 1x6e_A Zinc finger protein 24; 96.6 0.00092 3.2E-08 45.4 2.4 50 44-95 14-66 (72)
9 2adr_A ADR1; transcription reg 96.4 0.0021 7.2E-08 41.7 3.0 51 44-96 2-55 (60)
10 2cot_A Zinc finger protein 435 96.4 0.0024 8E-08 43.7 3.3 52 43-96 17-71 (77)
11 2eod_A TNF receptor-associated 96.3 0.0018 6.3E-08 43.3 2.3 48 43-93 9-59 (66)
12 2dmd_A Zinc finger protein 64, 96.3 0.0023 7.8E-08 45.0 2.8 49 44-94 8-59 (96)
13 2ctd_A Zinc finger protein 512 96.1 0.0027 9.3E-08 46.6 2.7 49 44-95 34-86 (96)
14 2wbt_A B-129; zinc finger; 2.7 96.1 0.003 1E-07 47.2 3.0 50 44-97 74-126 (129)
15 2ee8_A Protein ODD-skipped-rel 96.1 0.0047 1.6E-07 44.3 3.7 53 42-96 15-70 (106)
16 2lce_A B-cell lymphoma 6 prote 96.1 0.0034 1.2E-07 42.6 2.8 53 42-96 15-70 (74)
17 2gqj_A Zinc finger protein KIA 96.1 0.00056 1.9E-08 49.7 -1.3 53 44-97 24-80 (98)
18 2kmk_A Zinc finger protein GFI 96.1 0.002 6.9E-08 43.8 1.5 47 45-93 30-79 (82)
19 1a1h_A QGSR zinc finger peptid 96.0 0.0027 9.3E-08 44.0 2.1 50 44-95 34-86 (90)
20 2lv2_A Insulinoma-associated p 96.0 0.004 1.4E-07 45.4 3.1 52 43-96 27-81 (85)
21 2d9h_A Zinc finger protein 692 96.0 0.0018 6.1E-08 44.4 1.0 54 44-97 7-64 (78)
22 2dmd_A Zinc finger protein 64, 95.9 0.0075 2.6E-07 42.3 4.1 51 44-96 36-89 (96)
23 2rpc_A Zinc finger protein ZIC 95.9 0.0052 1.8E-07 47.1 3.3 57 40-96 21-87 (155)
24 2dlq_A GLI-kruppel family memb 95.9 0.0048 1.6E-07 45.0 2.9 52 44-95 35-90 (124)
25 2dlq_A GLI-kruppel family memb 95.8 0.0042 1.4E-07 45.3 2.6 53 43-97 65-120 (124)
26 2yt9_A Zinc finger-containing 95.8 0.0045 1.5E-07 43.4 2.5 53 44-96 35-90 (95)
27 4gzn_C ZFP-57, zinc finger pro 95.8 0.0043 1.5E-07 42.4 2.2 48 44-93 4-54 (60)
28 2csh_A Zinc finger protein 297 95.7 0.0046 1.6E-07 44.8 2.3 52 44-97 37-91 (110)
29 2ej4_A Zinc finger protein ZIC 95.7 0.0068 2.3E-07 42.6 3.2 54 42-95 23-86 (95)
30 2kmk_A Zinc finger protein GFI 95.6 0.0036 1.2E-07 42.5 1.4 50 45-96 2-54 (82)
31 2ee8_A Protein ODD-skipped-rel 95.6 0.0075 2.6E-07 43.2 3.1 51 44-96 45-98 (106)
32 1llm_C Chimera of ZIF23-GCN4; 95.4 0.0045 1.5E-07 43.4 1.3 54 44-99 3-59 (88)
33 2d9k_A FLN29 gene product; zin 95.2 0.0038 1.3E-07 43.9 0.2 48 43-93 16-64 (75)
34 2dmi_A Teashirt homolog 3; zin 95.0 0.018 6.2E-07 41.9 3.4 52 44-95 19-76 (115)
35 2gli_A Protein (five-finger GL 94.8 0.015 5.2E-07 44.2 2.7 50 44-95 67-123 (155)
36 1ubd_C Protein (YY1 zinc finge 94.7 0.023 7.7E-07 41.7 3.4 49 44-95 5-58 (124)
37 2ebt_A Krueppel-like factor 5; 94.7 0.019 6.5E-07 40.4 2.8 55 40-96 11-72 (100)
38 1wjp_A Zinc finger protein 295 94.6 0.011 3.7E-07 42.7 1.4 45 44-92 16-63 (107)
39 2eq0_A Zinc finger protein 347 94.5 0.021 7.3E-07 34.9 2.4 34 44-79 12-46 (46)
40 2ghf_A ZHX1, zinc fingers and 94.4 0.018 6E-07 43.3 2.2 50 44-93 18-73 (102)
41 2epx_A Zinc finger protein 28 94.3 0.022 7.6E-07 34.8 2.2 35 44-79 12-47 (47)
42 2em0_A Zinc finger protein 224 94.3 0.024 8.3E-07 34.7 2.3 34 44-79 12-46 (46)
43 2dlk_A Novel protein; ZF-C2H2 94.3 0.02 6.8E-07 38.7 2.1 51 44-95 7-64 (79)
44 2ema_A Zinc finger protein 347 94.3 0.022 7.4E-07 34.9 2.1 34 44-79 12-46 (46)
45 2eps_A POZ-, at HOOK-, and zin 94.3 0.023 7.7E-07 36.5 2.3 39 44-83 12-51 (54)
46 2ytn_A Zinc finger protein 347 94.2 0.029 1E-06 34.3 2.7 34 44-79 12-46 (46)
47 2lt7_A Transcriptional regulat 94.2 0.014 4.8E-07 45.3 1.3 49 43-93 21-72 (133)
48 1f2i_G Fusion of N-terminal 17 94.2 0.018 6E-07 38.6 1.6 48 43-92 18-70 (73)
49 2el4_A Zinc finger protein 268 94.2 0.029 9.9E-07 34.2 2.5 34 44-79 12-46 (46)
50 2ene_A Zinc finger protein 347 94.1 0.027 9.4E-07 34.4 2.3 34 44-79 12-46 (46)
51 2eop_A Zinc finger protein 268 94.1 0.028 9.6E-07 34.3 2.3 34 44-79 12-46 (46)
52 2i13_A AART; DNA binding, zinc 94.0 0.019 6.4E-07 45.5 1.8 51 44-96 105-158 (190)
53 1llm_C Chimera of ZIF23-GCN4; 94.0 0.0027 9.1E-08 44.6 -2.9 51 44-97 31-84 (88)
54 2epr_A POZ-, at HOOK-, and zin 93.9 0.03 1E-06 34.8 2.3 37 43-81 11-48 (48)
55 2emf_A Zinc finger protein 484 93.9 0.038 1.3E-06 33.8 2.7 34 44-79 12-46 (46)
56 1a1h_A QGSR zinc finger peptid 93.8 0.02 7E-07 39.4 1.5 51 44-96 4-59 (90)
57 1wjp_A Zinc finger protein 295 93.7 0.019 6.5E-07 41.4 1.1 49 44-95 42-93 (107)
58 2ep2_A Zinc finger protein 484 93.7 0.036 1.2E-06 33.8 2.3 34 44-79 12-46 (46)
59 2ytj_A Zinc finger protein 484 93.6 0.032 1.1E-06 34.1 2.0 34 44-79 12-46 (46)
60 2ytg_A ZFP-95, zinc finger pro 93.6 0.046 1.6E-06 33.3 2.7 34 44-79 12-46 (46)
61 2csh_A Zinc finger protein 297 93.6 0.034 1.2E-06 40.0 2.4 50 44-96 10-62 (110)
62 2em5_A ZFP-95, zinc finger pro 93.5 0.041 1.4E-06 33.7 2.3 34 44-79 12-46 (46)
63 2eoq_A Zinc finger protein 224 93.5 0.032 1.1E-06 34.1 1.8 34 44-79 12-46 (46)
64 2em9_A Zinc finger protein 224 93.5 0.046 1.6E-06 33.2 2.5 34 44-79 12-46 (46)
65 2epw_A Zinc finger protein 268 93.5 0.033 1.1E-06 33.9 1.8 34 44-79 12-46 (46)
66 2em7_A Zinc finger protein 224 93.5 0.047 1.6E-06 33.3 2.5 34 44-79 12-46 (46)
67 2ytq_A Zinc finger protein 268 93.4 0.042 1.4E-06 33.6 2.2 34 44-79 12-46 (46)
68 2emy_A Zinc finger protein 268 93.4 0.028 9.6E-07 34.4 1.4 34 44-79 12-46 (46)
69 2enc_A Zinc finger protein 224 93.3 0.039 1.3E-06 33.7 2.0 34 44-79 12-46 (46)
70 2eme_A Zinc finger protein 473 93.3 0.049 1.7E-06 33.1 2.4 34 44-79 12-46 (46)
71 1ubd_C Protein (YY1 zinc finge 93.2 0.055 1.9E-06 39.5 3.0 51 44-96 34-89 (124)
72 2ytk_A Zinc finger protein 347 93.2 0.035 1.2E-06 33.9 1.7 34 44-79 12-46 (46)
73 2j7j_A Transcription factor II 93.2 0.033 1.1E-06 37.7 1.6 50 45-96 2-58 (85)
74 2dmi_A Teashirt homolog 3; zin 93.1 0.032 1.1E-06 40.5 1.6 52 42-95 48-104 (115)
75 2eoe_A Zinc finger protein 347 93.1 0.035 1.2E-06 33.8 1.6 34 44-79 12-46 (46)
76 2ytr_A Zinc finger protein 347 93.1 0.047 1.6E-06 33.2 2.1 34 44-79 12-46 (46)
77 1tf6_A Protein (transcription 93.1 0.059 2E-06 42.6 3.2 52 44-95 72-130 (190)
78 2ep0_A Zinc finger protein 28 93.1 0.052 1.8E-06 33.1 2.3 34 44-79 12-46 (46)
79 2ysp_A Zinc finger protein 224 93.0 0.041 1.4E-06 33.6 1.7 34 44-79 12-46 (46)
80 2epz_A Zinc finger protein 28 93.0 0.055 1.9E-06 33.0 2.3 34 44-79 12-46 (46)
81 2en6_A Zinc finger protein 268 93.0 0.029 9.9E-07 34.3 0.9 34 44-79 12-46 (46)
82 2emk_A Zinc finger protein 28 92.9 0.035 1.2E-06 34.0 1.4 34 44-79 12-46 (46)
83 2elz_A Zinc finger protein 224 92.9 0.056 1.9E-06 33.0 2.3 34 44-79 12-46 (46)
84 2emh_A Zinc finger protein 484 92.9 0.034 1.2E-06 34.0 1.2 34 44-79 12-46 (46)
85 2eov_A Zinc finger protein 484 92.8 0.036 1.2E-06 33.7 1.3 34 44-79 12-46 (46)
86 2ely_A Zinc finger protein 224 92.8 0.041 1.4E-06 33.7 1.5 34 44-79 12-46 (46)
87 2eml_A Zinc finger protein 28 92.8 0.064 2.2E-06 32.7 2.4 34 44-79 12-46 (46)
88 2en1_A Zinc finger protein 224 92.7 0.054 1.9E-06 33.0 2.0 34 44-79 12-46 (46)
89 2i13_A AART; DNA binding, zinc 92.7 0.039 1.3E-06 43.6 1.6 47 45-93 22-71 (190)
90 2eq4_A Zinc finger protein 224 92.6 0.05 1.7E-06 33.1 1.7 34 44-79 12-46 (46)
91 2el6_A Zinc finger protein 268 92.6 0.068 2.3E-06 32.6 2.4 34 44-79 12-46 (46)
92 2jp9_A Wilms tumor 1; DNA bind 92.6 0.041 1.4E-06 39.7 1.5 47 45-93 37-88 (119)
93 2ytd_A Zinc finger protein 473 92.5 0.051 1.8E-06 33.1 1.7 34 44-79 12-46 (46)
94 2en8_A Zinc finger protein 224 92.5 0.074 2.5E-06 32.3 2.4 34 44-79 12-46 (46)
95 2ep3_A Zinc finger protein 484 92.5 0.068 2.3E-06 32.5 2.3 34 44-79 12-46 (46)
96 2eoo_A ZFP-95, zinc finger pro 92.5 0.037 1.3E-06 33.9 1.0 34 44-79 12-46 (46)
97 2j7j_A Transcription factor II 92.4 0.046 1.6E-06 36.9 1.5 47 44-95 31-85 (85)
98 2wbs_A Krueppel-like factor 4; 92.4 0.083 2.8E-06 36.2 2.8 51 43-95 4-61 (89)
99 2ytm_A Zinc finger protein 28 92.3 0.035 1.2E-06 34.1 0.7 34 44-79 12-46 (46)
100 2emm_A ZFP-95, zinc finger pro 92.2 0.059 2E-06 32.7 1.7 34 44-79 12-46 (46)
101 2wbs_A Krueppel-like factor 4; 92.1 0.069 2.4E-06 36.6 2.1 47 44-92 35-86 (89)
102 2jp9_A Wilms tumor 1; DNA bind 92.1 0.058 2E-06 38.9 1.8 47 44-92 66-117 (119)
103 2emx_A Zinc finger protein 268 92.1 0.061 2.1E-06 32.4 1.6 34 44-79 10-44 (44)
104 2gli_A Protein (five-finger GL 92.0 0.074 2.5E-06 40.3 2.4 52 44-95 3-63 (155)
105 2epq_A POZ-, at HOOK-, and zin 92.0 0.046 1.6E-06 33.3 1.0 35 44-80 10-45 (45)
106 2emp_A Zinc finger protein 347 91.8 0.052 1.8E-06 33.1 1.1 34 44-79 12-46 (46)
107 2yu8_A Zinc finger protein 347 91.7 0.053 1.8E-06 33.1 1.0 34 44-79 12-46 (46)
108 2yso_A ZFP-95, zinc finger pro 91.5 0.084 2.9E-06 32.1 1.8 34 44-79 12-46 (46)
109 2lt7_A Transcriptional regulat 91.4 0.053 1.8E-06 42.0 0.9 52 44-97 50-104 (133)
110 2rpc_A Zinc finger protein ZIC 91.4 0.15 5.1E-06 38.7 3.5 51 44-96 62-117 (155)
111 2em8_A Zinc finger protein 224 91.3 0.064 2.2E-06 32.8 1.1 34 44-79 12-46 (46)
112 2ebt_A Krueppel-like factor 5; 91.3 0.17 5.7E-06 35.3 3.4 49 44-94 45-98 (100)
113 2ctu_A Zinc finger protein 483 91.2 0.025 8.6E-07 37.3 -0.9 43 44-94 18-62 (73)
114 2ytt_A Zinc finger protein 473 91.1 0.043 1.5E-06 33.6 0.2 34 44-79 12-46 (46)
115 2em2_A Zinc finger protein 28 91.1 0.093 3.2E-06 32.0 1.7 34 44-79 12-46 (46)
116 1t1h_A Gspef-atpub14, armadill 90.9 0.13 4.4E-06 35.7 2.5 49 37-85 1-55 (78)
117 2ysl_A Tripartite motif-contai 90.6 0.11 3.7E-06 35.4 1.9 48 39-86 15-70 (73)
118 1tf6_A Protein (transcription 90.1 0.18 6.3E-06 39.6 3.1 51 44-96 104-161 (190)
119 2epa_A Krueppel-like factor 10 89.8 0.39 1.3E-05 31.8 4.1 50 41-92 14-70 (72)
120 1vd4_A Transcription initiatio 88.7 0.18 6E-06 33.3 1.7 37 44-84 14-50 (62)
121 3mjh_B Early endosome antigen 88.3 0.15 5.3E-06 31.8 1.1 27 44-70 5-32 (34)
122 2ep1_A Zinc finger protein 484 86.9 0.31 1.1E-05 29.3 1.9 33 44-78 12-45 (46)
123 6rxn_A Rubredoxin; electron tr 86.7 0.36 1.2E-05 32.0 2.2 35 43-82 3-39 (46)
124 2em3_A Zinc finger protein 28 86.6 0.24 8.4E-06 29.9 1.3 33 44-78 12-45 (46)
125 2eon_A ZFP-95, zinc finger pro 86.4 0.42 1.4E-05 29.0 2.3 33 44-78 12-45 (46)
126 2yts_A Zinc finger protein 484 86.3 0.49 1.7E-05 28.4 2.6 33 44-78 12-45 (46)
127 2emi_A Zinc finger protein 484 86.2 0.41 1.4E-05 28.9 2.2 33 44-78 12-45 (46)
128 2eq2_A Zinc finger protein 347 85.8 0.43 1.5E-05 28.8 2.1 33 44-78 12-45 (46)
129 2egp_A Tripartite motif-contai 85.5 0.54 1.9E-05 32.2 2.8 47 39-85 7-65 (79)
130 2emg_A Zinc finger protein 484 85.5 0.47 1.6E-05 28.6 2.2 33 44-78 12-45 (46)
131 3ztg_A E3 ubiquitin-protein li 85.5 0.14 4.7E-06 36.6 -0.4 45 39-83 8-60 (92)
132 2dlk_A Novel protein; ZF-C2H2 85.4 0.32 1.1E-05 32.5 1.5 38 44-83 38-78 (79)
133 1wge_A Hypothetical protein 26 85.0 0.36 1.2E-05 35.7 1.7 45 31-84 16-63 (83)
134 2csy_A Zinc finger protein 183 84.8 0.2 6.8E-06 35.1 0.2 47 38-84 9-60 (81)
135 2yth_A Zinc finger protein 224 84.8 0.54 1.8E-05 28.4 2.3 33 44-78 12-45 (46)
136 2ect_A Ring finger protein 126 84.8 0.61 2.1E-05 32.1 2.8 47 39-85 10-64 (78)
137 2enf_A Zinc finger protein 347 84.7 0.53 1.8E-05 28.3 2.2 33 44-78 12-45 (46)
138 2yrj_A Zinc finger protein 473 84.6 0.53 1.8E-05 28.2 2.2 33 44-78 12-45 (46)
139 1paa_A Yeast transcription fac 84.6 0.4 1.4E-05 25.7 1.4 26 44-69 2-28 (30)
140 2lv2_A Insulinoma-associated p 84.5 0.39 1.3E-05 34.7 1.7 29 44-72 56-85 (85)
141 2ytp_A Zinc finger protein 484 84.5 0.55 1.9E-05 28.3 2.2 33 44-78 12-45 (46)
142 2ytf_A Zinc finger protein 268 84.3 0.52 1.8E-05 28.3 2.0 33 44-78 12-45 (46)
143 2eow_A Zinc finger protein 347 84.3 0.38 1.3E-05 28.9 1.3 33 44-78 12-45 (46)
144 2yti_A Zinc finger protein 347 83.9 0.52 1.8E-05 28.4 1.9 33 44-78 12-45 (46)
145 2jr7_A DPH3 homolog; DESR1, CS 83.7 0.38 1.3E-05 36.1 1.4 45 31-84 9-56 (89)
146 2em4_A Zinc finger protein 28 83.6 0.47 1.6E-05 28.7 1.6 33 44-78 12-45 (46)
147 2epu_A Zinc finger protein 32; 83.4 0.5 1.7E-05 28.4 1.7 33 44-78 12-45 (45)
148 2eoy_A Zinc finger protein 473 83.4 0.66 2.2E-05 28.0 2.2 34 44-78 12-46 (46)
149 2eq1_A Zinc finger protein 347 83.3 0.63 2.2E-05 28.0 2.1 33 44-78 12-45 (46)
150 2el5_A Zinc finger protein 268 82.7 0.68 2.3E-05 27.2 2.0 32 44-77 10-42 (42)
151 2emj_A Zinc finger protein 28 82.3 0.55 1.9E-05 28.3 1.5 33 44-78 12-45 (46)
152 2ecy_A TNF receptor-associated 82.2 1.4 4.9E-05 29.3 3.7 47 39-85 10-62 (66)
153 2ecj_A Tripartite motif-contai 81.8 0.79 2.7E-05 29.4 2.2 19 39-57 10-28 (58)
154 2eor_A Zinc finger protein 224 81.7 0.46 1.6E-05 28.5 1.0 33 44-78 12-45 (46)
155 1x6h_A Transcriptional repress 81.6 0.77 2.6E-05 30.9 2.2 38 43-82 46-84 (86)
156 2kre_A Ubiquitin conjugation f 81.6 1.3 4.3E-05 32.9 3.6 45 39-85 24-75 (100)
157 3hcs_A TNF receptor-associated 81.5 0.86 2.9E-05 36.2 2.8 45 44-91 82-129 (170)
158 2ysj_A Tripartite motif-contai 81.3 0.56 1.9E-05 31.0 1.4 18 39-56 15-32 (63)
159 2kr4_A Ubiquitin conjugation f 81.1 1.1 3.8E-05 32.1 3.0 44 39-85 9-60 (85)
160 1wgm_A Ubiquitin conjugation f 80.9 1.4 4.8E-05 32.6 3.6 45 39-85 17-69 (98)
161 2yrm_A B-cell lymphoma 6 prote 80.9 0.65 2.2E-05 27.7 1.5 33 44-78 10-43 (43)
162 2eoz_A Zinc finger protein 473 80.9 0.53 1.8E-05 28.4 1.0 33 44-78 12-45 (46)
163 2ent_A Krueppel-like factor 15 80.8 1.1 3.6E-05 27.0 2.5 34 44-79 12-48 (48)
164 1wii_A Hypothetical UPF0222 pr 80.8 0.52 1.8E-05 35.0 1.2 37 40-83 19-57 (85)
165 1zw8_A Zinc-responsive transcr 80.4 1 3.4E-05 30.8 2.5 51 45-95 2-64 (64)
166 2em6_A Zinc finger protein 224 80.3 0.97 3.3E-05 27.2 2.2 33 44-78 12-45 (46)
167 2en9_A Zinc finger protein 28 80.2 0.73 2.5E-05 27.8 1.6 33 44-78 12-45 (46)
168 1twf_L ABC10-alpha, DNA-direct 80.0 0.95 3.2E-05 32.4 2.3 31 41-83 25-55 (70)
169 2eof_A Zinc finger protein 268 79.5 0.9 3.1E-05 26.8 1.8 32 44-77 12-44 (44)
170 2d8t_A Dactylidin, ring finger 79.4 0.62 2.1E-05 31.7 1.1 49 41-89 12-65 (71)
171 1yop_A KTI11P; zinc finger, me 79.4 0.44 1.5E-05 35.3 0.4 45 31-84 9-56 (83)
172 2adr_A ADR1; transcription reg 79.3 0.99 3.4E-05 28.5 2.0 28 44-71 30-58 (60)
173 2ct1_A Transcriptional repress 79.2 0.69 2.4E-05 31.0 1.3 29 43-71 44-73 (77)
174 2ctu_A Zinc finger protein 483 78.9 0.22 7.5E-06 32.5 -1.3 36 42-79 37-73 (73)
175 2k5c_A Uncharacterized protein 78.7 0.66 2.3E-05 34.7 1.1 13 44-56 51-63 (95)
176 2ecw_A Tripartite motif-contai 78.4 0.54 1.9E-05 32.3 0.6 47 39-85 14-71 (85)
177 2k5c_A Uncharacterized protein 78.0 0.61 2.1E-05 34.9 0.8 20 45-64 9-28 (95)
178 2enh_A Zinc finger protein 28 77.9 1.4 4.8E-05 26.4 2.3 32 44-77 12-44 (46)
179 2lcq_A Putative toxin VAPC6; P 77.6 0.76 2.6E-05 36.7 1.3 30 41-83 129-158 (165)
180 2djb_A Polycomb group ring fin 77.6 0.45 1.6E-05 32.5 -0.0 47 39-85 10-62 (72)
181 1bor_A Transcription factor PM 77.3 2 6.8E-05 28.1 3.1 42 43-84 5-48 (56)
182 2en7_A Zinc finger protein 268 77.3 1.3 4.3E-05 26.1 2.0 21 44-64 12-33 (44)
183 3pwf_A Rubrerythrin; non heme 77.1 1.2 4.2E-05 36.4 2.4 27 42-82 136-162 (170)
184 1klr_A Zinc finger Y-chromosom 76.8 0.75 2.6E-05 24.3 0.7 21 45-65 3-24 (30)
185 2f42_A STIP1 homology and U-bo 76.6 1.5 5E-05 36.4 2.8 41 39-85 101-153 (179)
186 2emb_A Zinc finger protein 473 76.4 1.7 5.9E-05 25.6 2.4 32 44-77 12-44 (44)
187 1wir_A Protein arginine N-meth 76.3 1.4 4.8E-05 34.6 2.5 34 41-74 12-46 (121)
188 2ecv_A Tripartite motif-contai 76.0 0.69 2.3E-05 31.8 0.5 47 39-85 14-71 (85)
189 2eom_A ZFP-95, zinc finger pro 75.9 1.1 3.6E-05 27.1 1.4 33 44-78 12-45 (46)
190 2yur_A Retinoblastoma-binding 75.8 0.69 2.4E-05 31.8 0.5 44 39-82 10-61 (74)
191 2kiz_A E3 ubiquitin-protein li 75.8 0.42 1.5E-05 32.1 -0.6 46 40-85 10-63 (69)
192 2yuc_A TNF receptor-associated 75.7 2.1 7.1E-05 29.5 3.0 47 43-91 15-63 (76)
193 2eoh_A Zinc finger protein 28 75.6 1.2 4E-05 26.8 1.5 32 44-77 12-44 (46)
194 1iym_A EL5; ring-H2 finger, ub 75.3 0.65 2.2E-05 29.7 0.3 39 45-83 6-53 (55)
195 2eq3_A Zinc finger protein 347 74.6 1.3 4.4E-05 26.4 1.5 32 44-77 12-44 (46)
196 2yto_A Zinc finger protein 484 74.4 1.1 3.6E-05 27.0 1.1 32 44-77 12-44 (46)
197 1znf_A 31ST zinc finger from X 74.0 1.5 5.1E-05 22.7 1.5 20 45-64 2-22 (27)
198 2emz_A ZFP-95, zinc finger pro 73.8 0.7 2.4E-05 27.8 0.1 32 44-77 12-44 (46)
199 2yte_A Zinc finger protein 473 73.6 1.7 5.8E-05 25.3 1.8 20 45-64 11-31 (42)
200 4ayb_P DNA-directed RNA polyme 73.2 2.2 7.6E-05 28.6 2.4 15 45-59 4-18 (48)
201 1rik_A E6APC1 peptide; E6-bind 73.0 1.1 3.9E-05 23.6 0.9 20 45-64 3-23 (29)
202 1ard_A Yeast transcription fac 72.8 1 3.6E-05 23.6 0.7 21 45-65 3-24 (29)
203 2lvr_A Zinc finger and BTB dom 75.0 0.74 2.5E-05 24.5 0.0 22 44-65 3-25 (30)
204 2m0d_A Zinc finger and BTB dom 72.4 1.4 4.8E-05 23.1 1.2 22 44-65 3-25 (30)
205 2kvh_A Zinc finger and BTB dom 72.1 1.2 4.2E-05 23.3 0.9 21 44-64 3-24 (27)
206 2m0f_A Zinc finger and BTB dom 72.1 1.3 4.5E-05 23.1 1.0 21 44-64 2-23 (29)
207 2els_A Zinc finger protein 406 72.1 1.3 4.6E-05 24.9 1.1 22 44-65 9-31 (36)
208 3uk3_C Zinc finger protein 217 71.9 1 3.5E-05 28.0 0.6 24 44-67 32-56 (57)
209 2elp_A Zinc finger protein 406 71.8 1 3.6E-05 25.5 0.5 21 44-64 9-31 (37)
210 2yu5_A Zinc finger protein 473 71.6 1.7 5.7E-05 25.7 1.5 20 45-64 13-33 (44)
211 1p7a_A BF3, BKLF, kruppel-like 71.4 1.6 5.6E-05 24.6 1.3 22 44-65 11-33 (37)
212 2eoj_A Zinc finger protein 268 71.2 1.7 5.8E-05 25.6 1.5 22 44-65 12-34 (44)
213 1e4u_A Transcriptional repress 71.1 2.3 7.9E-05 30.2 2.4 43 42-85 9-62 (78)
214 3iuf_A Zinc finger protein UBI 70.6 1.6 5.4E-05 27.0 1.2 20 45-64 8-28 (48)
215 2kvf_A Zinc finger and BTB dom 70.5 1.7 5.9E-05 22.8 1.2 21 44-64 3-24 (28)
216 2elx_A Zinc finger protein 406 70.5 1.4 4.9E-05 24.3 0.9 22 44-65 7-29 (35)
217 2d9h_A Zinc finger protein 692 70.5 2.7 9.3E-05 27.9 2.5 29 44-72 38-67 (78)
218 1lko_A Rubrerythrin all-iron(I 70.1 1.7 5.9E-05 35.9 1.7 28 42-82 153-180 (191)
219 3l11_A E3 ubiquitin-protein li 70.0 2.4 8.3E-05 31.3 2.4 45 40-85 11-62 (115)
220 2drp_A Protein (tramtrack DNA- 69.8 1.3 4.4E-05 28.5 0.7 25 44-68 40-65 (66)
221 2ea6_A Ring finger protein 4; 69.5 1 3.4E-05 29.8 0.1 45 40-84 11-67 (69)
222 1srk_A Zinc finger protein ZFP 69.5 1.9 6.6E-05 23.9 1.4 22 44-65 7-29 (35)
223 1v87_A Deltex protein 2; ring- 69.4 0.8 2.8E-05 33.8 -0.4 40 45-84 26-93 (114)
224 2ytb_A Zinc finger protein 32; 69.3 3.4 0.00011 23.9 2.5 20 45-64 12-32 (42)
225 2ckl_B Ubiquitin ligase protei 69.2 0.37 1.3E-05 38.2 -2.5 45 40-84 50-101 (165)
226 2m0e_A Zinc finger and BTB dom 69.1 1.6 5.3E-05 22.7 0.8 20 45-64 3-23 (29)
227 2ct2_A Tripartite motif protei 69.1 1.1 3.7E-05 31.2 0.2 48 39-86 10-69 (88)
228 2c2l_A CHIP, carboxy terminus 68.9 3.5 0.00012 34.2 3.4 47 39-85 203-255 (281)
229 2lvt_A Zinc finger and BTB dom 71.7 1 3.5E-05 23.9 0.0 20 45-64 3-23 (29)
230 2lvu_A Zinc finger and BTB dom 71.5 1 3.6E-05 23.4 0.0 20 45-64 3-23 (26)
231 2kvg_A Zinc finger and BTB dom 68.3 1.6 5.4E-05 23.1 0.7 21 44-64 3-24 (27)
232 3flo_B DNA polymerase alpha ca 68.2 1.6 5.6E-05 37.0 1.2 40 42-84 20-60 (206)
233 2jne_A Hypothetical protein YF 67.9 0.8 2.7E-05 35.1 -0.7 54 45-102 33-93 (101)
234 2elq_A Zinc finger protein 406 67.9 1.7 5.7E-05 24.4 0.9 22 44-65 9-31 (36)
235 2ept_A Zinc finger protein 32; 67.5 3.5 0.00012 23.8 2.3 22 44-65 10-32 (41)
236 2elm_A Zinc finger protein 406 67.2 1.8 6.1E-05 24.8 0.9 25 44-68 9-34 (37)
237 3htk_C E3 SUMO-protein ligase 67.1 2.2 7.7E-05 37.7 1.9 44 41-84 178-231 (267)
238 2eou_A Zinc finger protein 473 66.4 2.4 8.1E-05 25.1 1.4 22 44-65 12-34 (44)
239 3fl2_A E3 ubiquitin-protein li 66.2 0.92 3.1E-05 34.2 -0.7 44 41-85 49-99 (124)
240 2kdx_A HYPA, hydrogenase/ureas 66.2 2.7 9.1E-05 32.1 1.9 30 40-82 69-99 (119)
241 2elt_A Zinc finger protein 406 65.9 2 6.9E-05 23.9 0.9 22 44-65 9-31 (36)
242 2ghf_A ZHX1, zinc fingers and 65.8 1.9 6.3E-05 32.0 0.9 38 44-82 50-88 (102)
243 2ep4_A Ring finger protein 24; 65.5 2.2 7.5E-05 28.9 1.2 45 40-84 11-63 (74)
244 1x4j_A Ring finger protein 38; 64.9 1.2 4.2E-05 30.4 -0.2 42 43-84 22-71 (75)
245 2elo_A Zinc finger protein 406 64.5 1.4 4.6E-05 24.9 -0.0 22 44-65 9-31 (37)
246 1vq8_Z 50S ribosomal protein L 64.4 1.7 5.8E-05 32.0 0.5 32 40-84 23-56 (83)
247 1yuz_A Nigerythrin; rubrythrin 64.1 3.4 0.00012 34.5 2.4 27 42-82 169-195 (202)
248 2i5o_A DNA polymerase ETA; zin 63.9 2.8 9.6E-05 26.7 1.4 23 42-64 7-29 (39)
249 2en3_A ZFP-95, zinc finger pro 63.2 1.7 5.8E-05 26.0 0.2 20 45-64 13-33 (46)
250 2kfq_A FP1; protein, de novo p 63.1 2.7 9.4E-05 23.2 1.1 23 45-68 3-26 (32)
251 1e8j_A Rubredoxin; iron-sulfur 62.8 3.9 0.00013 27.4 2.0 14 40-53 32-45 (52)
252 1x5w_A Zinc finger protein 64, 62.6 2.2 7.4E-05 27.9 0.7 26 44-69 37-63 (70)
253 1ffk_W Ribosomal protein L37AE 62.2 1.7 5.7E-05 31.5 0.1 15 39-53 22-36 (73)
254 2kn9_A Rubredoxin; metalloprot 62.2 5.3 0.00018 29.3 2.8 41 42-82 25-69 (81)
255 2elr_A Zinc finger protein 406 62.0 2.7 9.3E-05 23.3 1.0 22 44-65 9-31 (36)
256 2elu_A Zinc finger protein 406 62.0 2.1 7.2E-05 26.7 0.5 25 45-69 10-35 (37)
257 2l6l_A DNAJ homolog subfamily 61.9 2.8 9.5E-05 33.1 1.3 49 32-90 99-150 (155)
258 2elv_A Zinc finger protein 406 61.6 3.2 0.00011 23.2 1.3 22 44-65 9-31 (36)
259 3jyw_9 60S ribosomal protein L 61.5 2 7E-05 31.0 0.4 14 40-53 22-35 (72)
260 1jm7_B BARD1, BRCA1-associated 61.4 2.4 8.3E-05 31.6 0.9 44 41-84 19-66 (117)
261 1rim_A E6APC2 peptide; E6-bind 60.9 2.7 9.1E-05 23.5 0.8 20 45-64 3-23 (33)
262 2czr_A TBP-interacting protein 60.4 2.8 9.6E-05 35.7 1.2 26 40-65 150-175 (226)
263 3j21_i 50S ribosomal protein L 60.2 2.2 7.4E-05 31.6 0.4 15 39-53 30-44 (83)
264 1njq_A Superman protein; zinc- 60.1 3.3 0.00011 23.7 1.2 22 44-65 6-28 (39)
265 2epv_A Zinc finger protein 268 59.2 3.8 0.00013 24.2 1.4 22 44-65 12-34 (44)
266 2ct5_A Zinc finger BED domain 59.1 3.8 0.00013 29.3 1.5 29 73-101 29-62 (73)
267 2epc_A Zinc finger protein 32; 58.0 4.7 0.00016 23.2 1.6 20 45-64 12-32 (42)
268 3iz5_m 60S ribosomal protein L 57.9 2.6 8.8E-05 31.8 0.5 14 40-53 32-45 (92)
269 3a43_A HYPD, hydrogenase nicke 57.8 4.3 0.00015 32.1 1.8 43 40-82 66-116 (139)
270 4a17_Y RPL37A, 60S ribosomal p 57.6 2.7 9.3E-05 32.3 0.5 31 40-84 32-65 (103)
271 2cot_A Zinc finger protein 435 57.2 6 0.00021 26.1 2.2 25 44-69 46-71 (77)
272 3izc_m 60S ribosomal protein R 57.2 2.5 8.6E-05 31.9 0.3 14 40-53 32-45 (92)
273 2xeu_A Ring finger protein 4; 57.1 1.2 4.1E-05 29.0 -1.4 42 44-85 3-56 (64)
274 3mkr_B Coatomer subunit alpha; 57.0 4.3 0.00015 36.7 1.8 34 43-89 277-311 (320)
275 3mv2_A Coatomer subunit alpha; 56.9 4.7 0.00016 36.6 2.1 35 42-89 285-320 (325)
276 1z6u_A NP95-like ring finger p 56.7 1 3.5E-05 35.7 -2.1 45 41-86 75-126 (150)
277 2ea5_A Cell growth regulator w 56.6 3.2 0.00011 28.5 0.8 42 43-85 14-58 (68)
278 2eos_A B-cell lymphoma 6 prote 56.4 4.5 0.00015 23.5 1.3 24 44-68 11-35 (42)
279 2en2_A B-cell lymphoma 6 prote 56.1 4.3 0.00015 23.4 1.2 22 44-65 11-33 (42)
280 4ayc_A E3 ubiquitin-protein li 55.8 1.8 6.2E-05 33.3 -0.7 42 43-84 52-98 (138)
281 2l0b_A E3 ubiquitin-protein li 55.7 1.7 5.8E-05 31.1 -0.8 43 42-84 38-88 (91)
282 2v3b_B Rubredoxin 2, rubredoxi 54.6 5.9 0.0002 26.8 1.8 13 44-56 3-15 (55)
283 3cc2_Z 50S ribosomal protein L 54.5 3.1 0.00011 32.6 0.5 33 40-84 56-89 (116)
284 2yuc_A TNF receptor-associated 53.7 6.9 0.00023 26.8 2.1 32 43-77 43-74 (76)
285 2l7x_A Envelope glycoprotein; 53.3 3.9 0.00013 29.7 0.7 20 45-64 31-50 (77)
286 1pft_A TFIIB, PFTFIIBN; N-term 53.2 3.5 0.00012 26.6 0.5 35 44-89 5-40 (50)
287 2lo3_A SAGA-associated factor 53.1 4.4 0.00015 26.6 0.9 28 42-70 15-42 (44)
288 2jvx_A NF-kappa-B essential mo 53.1 4.4 0.00015 24.1 0.9 21 44-64 3-24 (28)
289 2qgp_A HNH endonuclease; Q39X4 52.1 2.6 8.8E-05 32.0 -0.4 43 42-84 33-81 (112)
290 2ckl_A Polycomb group ring fin 52.0 1 3.6E-05 33.1 -2.6 46 40-85 11-62 (108)
291 3lrq_A E3 ubiquitin-protein li 51.9 1.3 4.5E-05 32.3 -2.0 45 41-85 19-70 (100)
292 2e72_A POGO transposable eleme 51.5 4.8 0.00016 27.0 0.9 22 43-64 11-33 (49)
293 2akl_A PHNA-like protein PA012 51.4 4 0.00014 32.8 0.6 26 45-82 28-53 (138)
294 2d9k_A FLN29 gene product; zin 49.5 5.8 0.0002 27.1 1.1 26 43-69 42-67 (75)
295 2epp_A POZ-, at HOOK-, and zin 49.3 6.6 0.00023 26.9 1.4 22 44-65 13-35 (66)
296 1yui_A GAGA-factor; complex (D 48.6 6.1 0.00021 24.5 1.1 22 44-65 24-46 (54)
297 1l8d_A DNA double-strand break 48.1 5.3 0.00018 29.6 0.8 11 46-56 49-59 (112)
298 2gqj_A Zinc finger protein KIA 48.1 4.1 0.00014 28.7 0.2 25 44-68 54-79 (98)
299 2a25_A Ubiquitin ligase SIAH1; 48.0 6.1 0.00021 32.6 1.2 51 44-97 6-65 (193)
300 1jm7_A BRCA1, breast cancer ty 47.8 3.3 0.00011 30.0 -0.4 45 41-85 18-70 (112)
301 4ap4_A E3 ubiquitin ligase RNF 47.4 9.3 0.00032 28.0 2.1 36 45-85 49-84 (133)
302 2y43_A E3 ubiquitin-protein li 47.0 2.3 7.7E-05 30.6 -1.4 45 41-85 19-69 (99)
303 2eox_A Zinc finger protein 473 46.3 5.4 0.00018 23.3 0.5 22 44-65 12-34 (44)
304 2jr6_A UPF0434 protein NMA0874 46.3 8.8 0.0003 27.0 1.7 33 39-82 3-35 (68)
305 2ecn_A Ring finger protein 141 45.9 2.5 8.7E-05 28.2 -1.2 45 40-84 11-59 (70)
306 2js4_A UPF0434 protein BB2007; 45.7 9.3 0.00032 27.0 1.8 33 39-82 3-35 (70)
307 2hf1_A Tetraacyldisaccharide-1 45.4 8.8 0.0003 27.0 1.6 33 39-82 3-35 (68)
308 1sp2_A SP1F2; zinc finger, tra 45.3 9 0.00031 20.4 1.3 21 45-65 3-26 (31)
309 1dl6_A Transcription factor II 45.0 8.4 0.00029 26.1 1.4 36 44-90 11-47 (58)
310 3ng2_A RNF4, snurf, ring finge 44.3 1.8 6.1E-05 28.9 -2.2 44 43-86 9-64 (71)
311 1dx8_A Rubredoxin; electron tr 44.2 7.8 0.00027 27.5 1.1 40 43-82 6-49 (70)
312 2yu4_A E3 SUMO-protein ligase 42.7 9.8 0.00033 27.3 1.5 41 42-82 5-59 (94)
313 2ecl_A Ring-box protein 2; RNF 42.5 2.2 7.6E-05 30.0 -2.0 12 73-84 64-75 (81)
314 1wim_A KIAA0161 protein; ring 42.4 5 0.00017 28.6 -0.1 48 44-91 5-72 (94)
315 3h0g_L DNA-directed RNA polyme 42.0 14 0.00048 25.8 2.2 30 42-83 19-48 (63)
316 2jvm_A Uncharacterized protein 41.9 10 0.00035 27.8 1.5 14 43-56 52-65 (80)
317 2pk7_A Uncharacterized protein 40.8 10 0.00035 26.8 1.3 33 39-82 3-35 (69)
318 4ic3_A E3 ubiquitin-protein li 40.6 6.9 0.00024 26.8 0.4 44 41-85 21-67 (74)
319 2jrr_A Uncharacterized protein 40.4 9.4 0.00032 27.1 1.1 13 43-55 39-51 (67)
320 2ab3_A ZNF29; zinc finger prot 40.3 9.7 0.00033 19.5 0.9 20 45-64 3-25 (29)
321 3dpl_R Ring-box protein 1; ubi 40.2 4.3 0.00015 30.5 -0.8 23 60-82 73-98 (106)
322 1fv5_A First zinc finger of U- 39.8 7.3 0.00025 23.5 0.4 20 44-63 8-28 (36)
323 2gmg_A Hypothetical protein PF 39.1 13 0.00044 28.6 1.7 28 43-82 66-93 (105)
324 1rmd_A RAG1; V(D)J recombinati 38.7 4.4 0.00015 29.9 -1.0 47 39-85 18-70 (116)
325 2ecm_A Ring finger and CHY zin 38.5 4.8 0.00016 25.3 -0.7 40 44-83 5-53 (55)
326 2ctd_A Zinc finger protein 512 38.4 10 0.00034 27.0 1.0 26 44-69 62-88 (96)
327 1s24_A Rubredoxin 2; electron 37.9 8.1 0.00028 28.7 0.4 40 42-81 33-76 (87)
328 2wbt_A B-129; zinc finger; 2.7 37.7 11 0.00038 27.3 1.1 25 44-68 100-125 (129)
329 2eln_A Zinc finger protein 406 37.7 12 0.0004 22.7 1.1 22 44-65 9-33 (38)
330 3hcs_A TNF receptor-associated 37.3 21 0.0007 28.0 2.8 46 44-91 110-156 (170)
331 1zfd_A SWI5; DNA binding motif 36.2 14 0.00048 19.6 1.2 22 44-65 3-27 (32)
332 3o9x_A Uncharacterized HTH-typ 35.5 7.9 0.00027 29.0 0.0 39 46-84 4-47 (133)
333 2vje_B MDM4 protein; proto-onc 35.2 4.3 0.00015 27.2 -1.4 43 42-84 5-55 (63)
334 1va1_A Transcription factor SP 34.8 14 0.00048 20.7 1.1 21 44-64 8-31 (37)
335 3t6p_A Baculoviral IAP repeat- 34.7 13 0.00044 33.6 1.3 43 42-85 293-338 (345)
336 3pih_A Uvrabc system protein A 34.7 17 0.0006 36.9 2.4 35 42-81 247-281 (916)
337 4a0k_B E3 ubiquitin-protein li 34.6 8.3 0.00028 29.7 0.0 37 46-82 50-109 (117)
338 1chc_A Equine herpes virus-1 r 34.4 8.2 0.00028 25.4 -0.0 41 44-84 5-51 (68)
339 1yk4_A Rubredoxin, RD; electro 34.2 12 0.00039 25.0 0.7 14 40-53 31-44 (52)
340 2jny_A Uncharacterized BCR; st 33.4 16 0.00054 25.7 1.3 33 39-82 5-37 (67)
341 3hct_A TNF receptor-associated 32.2 9.9 0.00034 28.2 0.1 47 39-85 13-65 (118)
342 3vhs_A ATPase wrnip1; zinc fin 32.1 19 0.00066 21.2 1.3 18 73-90 6-24 (29)
343 1g25_A CDK-activating kinase a 31.5 3.8 0.00013 27.0 -2.1 43 44-86 3-56 (65)
344 2jrp_A Putative cytoplasmic pr 30.9 11 0.00038 27.6 0.2 10 74-83 32-41 (81)
345 4rxn_A Rubredoxin; electron tr 30.4 14 0.00047 25.0 0.6 14 40-53 32-45 (54)
346 2djr_A Zinc finger BED domain- 30.3 9.1 0.00031 27.6 -0.4 16 85-100 49-64 (76)
347 1bhi_A CRE-BP1, ATF-2; CRE bin 30.0 19 0.00066 19.9 1.1 22 44-65 6-30 (38)
348 1e7l_A GP49, recombination end 29.6 7.9 0.00027 31.7 -0.9 42 44-85 20-67 (157)
349 1x3c_A Zinc finger protein 292 29.1 19 0.00064 25.9 1.1 32 44-76 27-61 (73)
350 2r6f_A Excinuclease ABC subuni 28.8 25 0.00084 36.2 2.3 34 43-81 266-299 (972)
351 3al0_B Aspartyl/glutamyl-tRNA( 28.6 23 0.00078 33.7 1.9 16 69-84 32-47 (482)
352 3sp4_A Aprataxin-like protein; 28.4 15 0.00052 31.0 0.6 25 42-66 167-193 (204)
353 3knv_A TNF receptor-associated 28.3 7.2 0.00025 30.4 -1.3 44 39-83 26-76 (141)
354 2jsp_A Transcriptional regulat 27.7 31 0.0011 25.6 2.1 32 68-100 16-47 (87)
355 2kpi_A Uncharacterized protein 27.6 21 0.00073 24.0 1.1 32 38-82 4-37 (56)
356 3h0l_B Aspartyl/glutamyl-tRNA( 27.4 25 0.00085 33.4 1.9 17 68-84 32-48 (478)
357 1qyp_A RNA polymerase II; tran 27.3 26 0.00088 23.1 1.5 35 44-82 15-52 (57)
358 3mhs_C SAGA-associated factor 26.6 25 0.00087 26.7 1.5 25 40-64 66-90 (99)
359 2jz8_A Uncharacterized protein 26.3 25 0.00087 26.1 1.4 16 43-58 47-62 (87)
360 3bhp_A UPF0291 protein YNZC; N 26.2 52 0.0018 22.8 2.9 21 193-213 20-41 (60)
361 3ip4_B Aspartyl/glutamyl-tRNA( 25.9 27 0.00093 33.2 1.9 17 68-84 30-46 (483)
362 2yho_A E3 ubiquitin-protein li 25.3 18 0.00062 25.2 0.4 43 42-85 16-61 (79)
363 1ncs_A Peptide M30F, transcrip 25.2 21 0.00072 21.3 0.7 22 44-65 18-42 (47)
364 2l8e_A Polyhomeotic-like prote 24.6 27 0.00091 23.1 1.2 15 43-57 17-31 (49)
365 2fiy_A Protein FDHE homolog; F 23.8 20 0.00069 31.9 0.5 39 42-82 180-231 (309)
366 3k7a_M Transcription initiatio 23.5 36 0.0012 30.1 2.2 43 40-90 17-59 (345)
367 1i7f_A Heat shock protein 33; 23.0 18 0.0006 31.9 0.0 13 40-53 223-235 (292)
368 2j9u_B VPS36, vacuolar protein 22.8 22 0.00075 25.9 0.5 9 74-82 18-26 (76)
369 3kfu_F Aspartyl/glutamyl-tRNA( 21.9 36 0.0012 32.3 1.9 17 68-84 30-46 (466)
370 2ecg_A Baculoviral IAP repeat- 21.9 23 0.00078 24.1 0.4 44 41-85 22-68 (75)
371 1x6f_A Zinc finger protein 462 21.9 29 0.00099 24.4 1.0 35 44-80 25-60 (88)
372 2ygr_A Uvrabc system protein A 21.4 42 0.0014 34.6 2.4 34 43-81 274-308 (993)
373 4dvc_A Thiol:disulfide interch 21.2 9.5 0.00032 29.0 -1.9 10 43-52 29-38 (184)
374 2d8s_A Cellular modulator of i 20.4 84 0.0029 22.0 3.2 12 73-84 58-69 (80)
375 1ee8_A MUTM (FPG) protein; bet 20.3 28 0.00094 30.1 0.7 28 45-81 236-263 (266)
No 1
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.53 E-value=4.5e-05 Score=52.64 Aligned_cols=54 Identities=22% Similarity=0.413 Sum_probs=45.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~~ 97 (223)
.|.|++|+.. .....|..|+...|..+.+...|++|..... .++..|+...|+.
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 4999999998 6678899999878887778889999999764 5899998877754
No 2
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.49 E-value=5e-05 Score=50.64 Aligned_cols=54 Identities=24% Similarity=0.550 Sum_probs=45.0
Q ss_pred ceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 43 ~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
-.|.|+.|+.. -....|..|+...|....+...|++|..... .++..|+...|+
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 36999999998 5678899999887866677889999999765 589999887775
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=96.88 E-value=0.00034 Score=45.01 Aligned_cols=51 Identities=22% Similarity=0.334 Sum_probs=39.4
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
.|.|+.|+.. -....|..|+.. |.. .+...|++|..... .++..|+...|+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRT-HTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CccCCCCcchhCChHHHHHHHHH-cCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 5899999998 577889999885 433 45689999998754 589999887764
No 4
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.87 E-value=0.00067 Score=47.79 Aligned_cols=51 Identities=27% Similarity=0.454 Sum_probs=24.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
.|.|++|+.. -....|..|+.. |.. .+...|++|..... .++..|+...|+
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 60 (95)
T 2yt9_A 7 GVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDG 60 (95)
T ss_dssp CEECSSSCCEESSSHHHHHHHHH-SCS-SCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred CeECCCCCCccCChHHHHHHHHh-cCC-CCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence 3556666555 244455555553 221 23345666655433 355555544443
No 5
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.81 E-value=0.00059 Score=46.00 Aligned_cols=53 Identities=19% Similarity=0.289 Sum_probs=41.7
Q ss_pred ceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcccc
Q 027446 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (223)
Q Consensus 43 ~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~~ 97 (223)
..|.|+.|+.. -....|..|+.. |.. .+...|++|..... .++..|+...|+.
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCC-SCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 35999999998 567889999986 543 45689999999865 5899998776653
No 6
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.76 E-value=0.00081 Score=46.36 Aligned_cols=54 Identities=20% Similarity=0.337 Sum_probs=42.4
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCC--CCccccCCccCccc--hhhhhhhhhcccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIE--AKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e--~k~~VCPVCa~~v~--~d~i~Hi~~qH~~ 97 (223)
.|.|++|+.. .....|..|+...|... .+...|++|..... .++..|+...|+.
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence 5999999998 56778999998777653 36689999998764 5899998766643
No 7
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=96.69 E-value=0.001 Score=42.69 Aligned_cols=50 Identities=18% Similarity=0.321 Sum_probs=39.2
Q ss_pred eeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 45 FLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
|.|+.|+.. -....|..|+.. |.. .+...|++|..... .++..|+...|+
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS-CCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC-CCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence 799999998 567889999876 443 45679999999765 589999866554
No 8
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.61 E-value=0.00092 Score=45.38 Aligned_cols=50 Identities=20% Similarity=0.311 Sum_probs=39.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH 95 (223)
.|.|++|+.. -....|..|+.. |.. .+...|++|..... .++..|+.+.+
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~ 66 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRV-HTG-EKPYKCLECGKAFSQNSGLINHQRIHT 66 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHG-GGC-SCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHh-cCC-CCCeECCCCCcccCCHHHHHHHHHhcC
Confidence 5999999998 567789999875 433 46689999999765 58889986544
No 9
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=96.40 E-value=0.0021 Score=41.68 Aligned_cols=51 Identities=22% Similarity=0.399 Sum_probs=39.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
.|.|+.|+.. -....|..|+.. |.. .+...|++|..... .++..|+...|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~ 55 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHS 55 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence 4899999998 567889999876 543 45679999999765 588899754553
No 10
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.38 E-value=0.0024 Score=43.75 Aligned_cols=52 Identities=21% Similarity=0.379 Sum_probs=40.1
Q ss_pred ceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 43 ~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
..|.|+.|+.. -....|..|+.. |.. .+...|++|..... .+|..|+.+.++
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG-EKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC-SCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC-CcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 36999999998 457889999875 443 45689999999764 589999866543
No 11
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.29 E-value=0.0018 Score=43.32 Aligned_cols=48 Identities=19% Similarity=0.406 Sum_probs=38.6
Q ss_pred ceeeCCCCCccchhhhhhccccccCCCCCCccccC-CccCccc--hhhhhhhhh
Q 027446 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCP-VCAKRVG--TDIVSHITM 93 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCP-VCa~~v~--~d~i~Hi~~ 93 (223)
-.|.|++|+..|....|..|... ...+...|+ +|..... .++..|+.+
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHHh
Confidence 36999999999778889999875 456788999 9998643 588888753
No 12
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.28 E-value=0.0023 Score=45.05 Aligned_cols=49 Identities=16% Similarity=0.297 Sum_probs=26.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQ 94 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~q 94 (223)
.|.|++|+.. -....|..|+...+. .+...|++|..... .++..|+...
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h 59 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMRCHTG--VKPYKCKTCDYAAADSSSLNKHLRIH 59 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGGGCCC--CCSEECSSSCCEESSHHHHHHHHHHS
T ss_pred CeECCCCCCccCCHHHHHHHHHhcCC--CCCEeCCCCCCccCCHHHHHHHHHHh
Confidence 3666666665 345556666654322 23456666666543 3566666543
No 13
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.14 E-value=0.0027 Score=46.57 Aligned_cols=49 Identities=24% Similarity=0.473 Sum_probs=39.5
Q ss_pred eeeCCCCCccc--hhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcc
Q 027446 44 MFLCPFCAEDF--DIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CPfC~~~~--d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH 95 (223)
.|.|+.|++.| ....|..|+.. | ..+...|++|.+... .++..|+..-|
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~-h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H 86 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMEN-C--KQEMFTCHHCGKQLRSLAGMKYHVMANH 86 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHH-H--CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred CcCCCCCCCCcccCHHHHHHHHHH-H--CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence 59999999998 78899999875 5 557789999999865 58889933345
No 14
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=96.13 E-value=0.003 Score=47.16 Aligned_cols=50 Identities=32% Similarity=0.638 Sum_probs=39.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~~ 97 (223)
.|.|++|+.. .....|..|+.. | .++..|++|..... .++..|+...|+-
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 5999999998 566778899875 5 55679999998764 5899998877764
No 15
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=96.09 E-value=0.0047 Score=44.33 Aligned_cols=53 Identities=19% Similarity=0.431 Sum_probs=37.5
Q ss_pred cceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 42 NAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 42 ~~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
...|.|++|+.. -....|..|+...+. .+...|++|..... .++..|+...++
T Consensus 15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 15 KKEFICKFCGRHFTKSYNLLIHERTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHHHHCC--SCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred CcCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 346889999987 456778888875432 35578999988754 578888765543
No 16
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.09 E-value=0.0034 Score=42.61 Aligned_cols=53 Identities=19% Similarity=0.399 Sum_probs=40.3
Q ss_pred cceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 42 NAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 42 ~~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
...|.|+.|+.. -....|..|+.. |.. .+...|++|..... .++..|+...++
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTV-HTG-EKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHH-HCC-CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHH-cCC-CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 346999999998 467889999875 433 35679999999764 589999865443
No 17
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.07 E-value=0.00056 Score=49.69 Aligned_cols=53 Identities=23% Similarity=0.378 Sum_probs=41.4
Q ss_pred eeeCCCCCccc--hhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcccc
Q 027446 44 MFLCPFCAEDF--DIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (223)
Q Consensus 44 ~F~CPfC~~~~--d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~~ 97 (223)
.|.|++|+..| ....|..|+... ....+...|++|..... .+|..|++..|+.
T Consensus 24 ~~~C~~C~k~f~~~~~~L~~H~~~h-~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 24 EAVCPTCNVVTRKTLVGLKKHMEVC-QKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp CCCCTTTCCCCSSCSHHHHHHHHHH-HHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CcCCCCCCCChhhhHHHHHHHHHHH-cCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 59999999986 578999998764 33245679999999865 5899998776654
No 18
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=96.05 E-value=0.002 Score=43.79 Aligned_cols=47 Identities=19% Similarity=0.452 Sum_probs=22.2
Q ss_pred eeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhh
Q 027446 45 FLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITM 93 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~ 93 (223)
|.|++|+.. -....|..|+...+ . .+...|++|..... .++..|++.
T Consensus 30 ~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~ 79 (82)
T 2kmk_A 30 YPCQYCGKRFHQKSDMKKHTFIHT-G-EKPHKCQVCGKAFSQSSNLITHSRK 79 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHH-T-CCCEECTTTSCEESSHHHHHHHHHH
T ss_pred eeCCcCChhhCCHHHHHHHHHHhc-C-CCCCcCCCcchhhCChHHHHHHHHh
Confidence 555555554 34445555554322 1 23345555555432 345555443
No 19
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=96.03 E-value=0.0027 Score=44.01 Aligned_cols=50 Identities=22% Similarity=0.453 Sum_probs=26.7
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH 95 (223)
.|.|++|+.. -....|..|+.. |.. .+...|++|..... .++..|+.+.+
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 86 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHTKIHL 86 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred CccCCCCCcccCCHHHHHHHHHH-cCC-CCCccCCCCCchhCCHHHHHHHHHHhc
Confidence 3666666665 445556666553 222 23456666666543 35666654433
No 20
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.02 E-value=0.004 Score=45.43 Aligned_cols=52 Identities=23% Similarity=0.337 Sum_probs=41.4
Q ss_pred ceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 43 ~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
..|.||.|++. -....|..|+.. |.. .++-.|++|..... .++.+|+...|.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~ 81 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRL-LHA-AQVFPCKYCPATFYSSPGLTRHINKCHP 81 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHT-TSC-SSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhh-ccC-CCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence 46999999998 567889999886 433 46789999999865 689999866664
No 21
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.00 E-value=0.0018 Score=44.38 Aligned_cols=54 Identities=20% Similarity=0.338 Sum_probs=41.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCC-CCCccccCCccCccc--hhhhhhhhhcccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPI-EAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~-e~k~~VCPVCa~~v~--~d~i~Hi~~qH~~ 97 (223)
.|.|+.|+.. -....|..|+...+.. ..+...|++|..... .++..|+...|..
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~ 64 (78)
T 2d9h_A 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64 (78)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred CeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence 5999999998 5677899998754321 256789999999865 5899998666644
No 22
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.94 E-value=0.0075 Score=42.32 Aligned_cols=51 Identities=20% Similarity=0.397 Sum_probs=40.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
.|.|++|+.. .....|..|+.. |.. .+...|++|..... .++..|+...|+
T Consensus 36 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 89 (96)
T 2dmd_A 36 PYKCKTCDYAAADSSSLNKHLRI-HSD-ERPFKCQICPYASRNSSQLTVHLRSHTG 89 (96)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCC-CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred CEeCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHhcC
Confidence 5999999998 577889999986 433 45679999999764 589999876554
No 23
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=95.88 E-value=0.0052 Score=47.07 Aligned_cols=57 Identities=19% Similarity=0.290 Sum_probs=43.6
Q ss_pred CccceeeCCCCCcc-chhhhhhccccccCCCCCCc-------cccCCccCccc--hhhhhhhhhccc
Q 027446 40 DLNAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKN-------GVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 40 d~~~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~-------~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
+....|+|+.|+.. -....|..|+...|..+... ..|++|..... .++..|+...++
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 87 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC
T ss_pred hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC
Confidence 44557999999998 56788999999888775432 57999998764 588899865443
No 24
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.86 E-value=0.0048 Score=45.03 Aligned_cols=52 Identities=21% Similarity=0.383 Sum_probs=30.6
Q ss_pred eeeCCCCCcc-chhhhhhccccccCC-CCCCccccCCccCccc--hhhhhhhhhcc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHP-IEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~-~e~k~~VCPVCa~~v~--~d~i~Hi~~qH 95 (223)
.|.|++|+.. .....|..|+...|. ...+...|++|..... .++..|+...+
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~ 90 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHT 90 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcC
Confidence 4677777765 456667777665432 2334456777776543 46666765444
No 25
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.84 E-value=0.0042 Score=45.32 Aligned_cols=53 Identities=23% Similarity=0.414 Sum_probs=41.4
Q ss_pred ceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcccc
Q 027446 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (223)
Q Consensus 43 ~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~~ 97 (223)
..|.|++|+.. -....|..|+...+ . .+...|++|..... .++..|+...|+.
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVSHT-G-EMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHS-S-SCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred CCeECCCCCCccCCHHHHHHHHHHcC-C-CCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence 46999999998 66788999997643 2 45679999999765 5899998766753
No 26
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.80 E-value=0.0045 Score=43.43 Aligned_cols=53 Identities=21% Similarity=0.431 Sum_probs=42.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
.|.|+.|+.. .....|..|+...|....+...|++|..... .++..|+...|+
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 90 (95)
T 2yt9_A 35 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90 (95)
T ss_dssp SEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcC
Confidence 5999999998 5778899999876554457889999998765 589999865564
No 27
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=95.78 E-value=0.0043 Score=42.41 Aligned_cols=48 Identities=29% Similarity=0.628 Sum_probs=39.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhh
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITM 93 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~ 93 (223)
-|.|+.|+.. -....|..|+.. |.. -++-.|++|..... .++..|+++
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~-Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~ 54 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRA-HLG-YRPRSCPECGKCFRDQSEVNRHLKV 54 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HHT-CCCEECTTTCCEESSHHHHHHHGGG
T ss_pred CccCCCCCCEeCCHHHHHHHHHH-hCC-CcCeECCCCCCCcCCHHHHHHHhCc
Confidence 3899999998 567789999875 654 56789999999865 689999865
No 28
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.73 E-value=0.0046 Score=44.77 Aligned_cols=52 Identities=25% Similarity=0.350 Sum_probs=31.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~~ 97 (223)
.|.|++|+.. -....|..|+.. |.. .+...|++|..... .++..|++..|..
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKI-HTG-IKPYECNICAKRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTT-TCC-CCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH-cCC-CCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence 4777777776 455667777664 322 24467777777643 4677776655533
No 29
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.73 E-value=0.0068 Score=42.59 Aligned_cols=54 Identities=19% Similarity=0.256 Sum_probs=40.9
Q ss_pred cceeeCCCCCcc-chhhhhhccccccCCCCCCc-------cccCCccCccc--hhhhhhhhhcc
Q 027446 42 NAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKN-------GVCPVCAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 42 ~~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~-------~VCPVCa~~v~--~d~i~Hi~~qH 95 (223)
...|+|+.|+.. -....|..|+...|..+... ..|++|..... .+|..|+++.+
T Consensus 23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~ 86 (95)
T 2ej4_A 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86 (95)
T ss_dssp CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHH
T ss_pred cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcC
Confidence 346889999998 56788999988767665321 68999999865 58899986543
No 30
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.64 E-value=0.0036 Score=42.49 Aligned_cols=50 Identities=24% Similarity=0.503 Sum_probs=38.8
Q ss_pred eeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 45 FLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
|.|+.|+.. -....|..|+...+ ..+...|++|..... .++..|+...++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHS--DTRPYPCQYCGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHH--TCCCEECSSSCCEESSHHHHHHHHHHHHT
T ss_pred ccCCCCcccccCchhHHHHHHHcC--CCCCeeCCcCChhhCCHHHHHHHHHHhcC
Confidence 899999998 57788999998643 345679999998764 588899865443
No 31
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=95.62 E-value=0.0075 Score=43.22 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=39.6
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
.|.|+.|+.. .....|..|+.. |.. .+...|++|..... .++..|+.+.++
T Consensus 45 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 98 (106)
T 2ee8_A 45 PYTCDICHKAFRRQDHLRDHRYI-HSK-EKPFKCQECGKGFCQSRTLAVHKTLHMQ 98 (106)
T ss_dssp CCBCSSSCCBCSCHHHHHHHGGG-SCC-CCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred CcCCCCccchhCCHHHHHHHHHH-hCC-CCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence 5999999998 577889999875 433 45679999999764 589999865543
No 32
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=95.43 E-value=0.0045 Score=43.36 Aligned_cols=54 Identities=24% Similarity=0.402 Sum_probs=41.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcccchh
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGNFF 99 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~~~f 99 (223)
.|.|+.|+.. -....|..|+.. |.. .+...|++|..... .++..|+...|+..|
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~ 59 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHRDIQHILPI 59 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHHHHTHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCCccCCHHHHHHHHHHhCCCcc
Confidence 4899999997 567788899875 443 35678999998754 589999888886444
No 33
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.16 E-value=0.0038 Score=43.89 Aligned_cols=48 Identities=25% Similarity=0.474 Sum_probs=39.2
Q ss_pred ceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCccc-hhhhhhhhh
Q 027446 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG-TDIVSHITM 93 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~-~d~i~Hi~~ 93 (223)
-.|.|+||+..|-...|-.|. .|+. .+.+.||.|...+. .+|..|+.+
T Consensus 16 r~~~C~~C~~~~~~~~L~~H~--~~c~-~~~~~C~~C~~~~~~~~l~~H~~~ 64 (75)
T 2d9k_A 16 RLAVCQHCDLELSILKLKEHE--DYCG-ARTELCGNCGRNVLVKDLKTHPEV 64 (75)
T ss_dssp CCEECSSSCCEECHHHHHHHH--HHHH-HCEEECSSSCCEEETTGGGTHHHH
T ss_pred cccCCcccChHhhHHHHHHHH--hHcC-CCceEcccCCCcCcHHHHHHHHHH
Confidence 368999999999999999997 4654 56789999998754 688888754
No 34
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.95 E-value=0.018 Score=41.87 Aligned_cols=52 Identities=19% Similarity=0.271 Sum_probs=33.2
Q ss_pred eeeCCCCCcc-chhhhhhcccccc-CCCCCCccccCCccCcc----chhhhhhhhhcc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDED-HPIEAKNGVCPVCAKRV----GTDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~e-H~~e~k~~VCPVCa~~v----~~d~i~Hi~~qH 95 (223)
.|.|+.|++. .....|..|+... |..+.....|++|.... ..++..|+.+.+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence 4888888887 5567788887741 33333334588887654 246777765433
No 35
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.77 E-value=0.015 Score=44.16 Aligned_cols=50 Identities=26% Similarity=0.489 Sum_probs=33.5
Q ss_pred eeeCCC--CCcc-chhhhhhccccccCCCCCCccccCC--ccCccc--hhhhhhhhhcc
Q 027446 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCPV--Ca~~v~--~d~i~Hi~~qH 95 (223)
.|.|++ |+.. .....|..|+.. |.. .+...|++ |..... .++..|+...|
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H 123 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRS-HTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTH 123 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHH-TTT-CCCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred CccCCCCCCCCcccCHHHHHHHHHH-cCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhc
Confidence 478886 8886 566778888775 432 35567887 887654 47788864344
No 36
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=94.70 E-value=0.023 Score=41.66 Aligned_cols=49 Identities=22% Similarity=0.450 Sum_probs=35.8
Q ss_pred eeeCC--CCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcc
Q 027446 44 MFLCP--FCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CP--fC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH 95 (223)
.|.|| .|+.. -....|..|+.. | ..+...|++|..... .++..|+...+
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~-h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~ 58 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLHT-H--GPRVHVCAECGKAFVESSKLKRHQLVHT 58 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHGG-G--SCCCEECTTTCCEESSHHHHHHHGGGTS
T ss_pred cccCCCCCCcCccCCHHHHHHHHHH-c--CCCCeECCCCCchhCCHHHHHHHHHHcC
Confidence 58888 78887 467788888864 5 456678899888754 57888876544
No 37
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=94.69 E-value=0.019 Score=40.38 Aligned_cols=55 Identities=18% Similarity=0.402 Sum_probs=38.3
Q ss_pred CccceeeCCC--CCcc-chhhhhhccccccCCCCCCccccC--CccCccc--hhhhhhhhhccc
Q 027446 40 DLNAMFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCP--VCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 40 d~~~~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCP--VCa~~v~--~d~i~Hi~~qH~ 96 (223)
+....|.|++ |+.. -....|..|+...+. .+...|+ +|..... .++..|+...++
T Consensus 11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG--EKPYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp CSCCCEECCSSSCCCEESCHHHHHHHHHHHSC--CCCEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred ccCcceEcCCCCCCCcccCHHHHHHHHHHhCC--CCCeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 4455788987 9987 567788888875332 3557886 5988654 578888765544
No 38
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.59 E-value=0.011 Score=42.74 Aligned_cols=45 Identities=20% Similarity=0.412 Sum_probs=35.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhh
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHIT 92 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~ 92 (223)
.|.|++|+.. -....|..|+.. | .+...|++|..... .++..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 5899999997 567788888876 4 35678999988764 57888873
No 39
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.49 E-value=0.021 Score=34.91 Aligned_cols=34 Identities=21% Similarity=0.074 Sum_probs=26.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQLI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHTT-TCCC-CCSCCSCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 5999999998 566788889765 6544 67789998
No 40
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.40 E-value=0.018 Score=43.33 Aligned_cols=50 Identities=22% Similarity=0.469 Sum_probs=38.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCC--CCCccccCCccCccc--hhhhhh-hhh
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPI--EAKNGVCPVCAKRVG--TDIVSH-ITM 93 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~--e~k~~VCPVCa~~v~--~d~i~H-i~~ 93 (223)
.|.|++|+.. -....|..|+...|.. ..++..|++|..... .++..| +++
T Consensus 18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~ 73 (102)
T 2ghf_A 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY 73 (102)
T ss_dssp SEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHT
T ss_pred CcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh
Confidence 5999999998 5677899998766752 456789999999764 588889 443
No 41
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.35 E-value=0.022 Score=34.81 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=27.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+...|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~-~k~~~C~~C 47 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTG-EKPSGPSSG 47 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTT-SCSSSCCCC
T ss_pred CEECCccCchhCChHHHHHHhHhhcCC-CCCCCCCCC
Confidence 4899999998 5667888898745654 356789988
No 42
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=94.28 E-value=0.024 Score=34.66 Aligned_cols=34 Identities=18% Similarity=0.085 Sum_probs=26.7
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVG-EKPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSS-SSCSCSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCcCCCCC
Confidence 4899999998 566788899875 543 466789998
No 43
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.28 E-value=0.02 Score=38.71 Aligned_cols=51 Identities=24% Similarity=0.413 Sum_probs=39.2
Q ss_pred eeeCCC--CCcc-chhhhhhccccccCCCCCCccccCC--ccCccc--hhhhhhhhhcc
Q 027446 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCPV--Ca~~v~--~d~i~Hi~~qH 95 (223)
.|+|++ |+.. -....|..|+...|.. .+...|++ |..... .++..|+.+.+
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 64 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHS 64 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhC
Confidence 478887 9998 5678899998865654 46689999 998754 58899986544
No 44
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=94.28 E-value=0.022 Score=34.90 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=26.6
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++..|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG-GGC-CCCCSSSCC
T ss_pred CcCCCCCcchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999998 566788889775 544 367789998
No 45
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.28 E-value=0.023 Score=36.49 Aligned_cols=39 Identities=21% Similarity=0.351 Sum_probs=31.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCcc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRV 83 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v 83 (223)
.|.|+.|+.. -....|..|+...|.. .+...|++|....
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~F 51 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGP 51 (54)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCSS
T ss_pred CeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCCC
Confidence 5999999998 5778899998756654 4667999998754
No 46
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.24 E-value=0.029 Score=34.26 Aligned_cols=34 Identities=21% Similarity=0.132 Sum_probs=26.6
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRGI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGGG-TSCC-CCCSCCCC
T ss_pred CeECCCCCCeeCCHHHHHHHhhh-cCCC-CCCCCCCC
Confidence 4899999998 566778899764 6543 67899998
No 47
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=94.21 E-value=0.014 Score=45.30 Aligned_cols=49 Identities=20% Similarity=0.373 Sum_probs=34.2
Q ss_pred ceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhh
Q 027446 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITM 93 (223)
Q Consensus 43 ~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~ 93 (223)
-.|.|+.|+.. -....|..|+.. |.. .++-.|++|..... .++..|+.+
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFNI-HSW-EKKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHHH-HHC-CSCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHHH-cCC-CCCeeCCccCeecccccchhhhccc
Confidence 45888888887 566778888763 543 35667888887654 477778654
No 48
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=94.17 E-value=0.018 Score=38.62 Aligned_cols=48 Identities=25% Similarity=0.491 Sum_probs=36.5
Q ss_pred ceeeCCC--CCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhh
Q 027446 43 AMFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHIT 92 (223)
Q Consensus 43 ~~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~ 92 (223)
..|.||+ |+.. -....|..|+.. |.. .+...|++|..... .++..|+.
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIR 70 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHh-hCC-CCCeECCCCCchhCCHHHHHHHHH
Confidence 3599996 9998 567788899874 443 45679999999765 58888864
No 49
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=94.16 E-value=0.029 Score=34.19 Aligned_cols=34 Identities=21% Similarity=0.140 Sum_probs=26.6
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRS-HTG-VKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGG-SSS-CCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4999999998 566788899865 543 456799998
No 50
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.11 E-value=0.027 Score=34.40 Aligned_cols=34 Identities=18% Similarity=0.054 Sum_probs=26.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TCC-CCCCSCCCC
T ss_pred CeECCCCCchhCChHHHHHHHhh-cCC-CCCCCCCCC
Confidence 4999999998 566788899875 544 366789998
No 51
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.06 E-value=0.028 Score=34.27 Aligned_cols=34 Identities=15% Similarity=0.001 Sum_probs=26.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4899999998 566788889875 543 456789998
No 52
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=94.04 E-value=0.019 Score=45.50 Aligned_cols=51 Identities=24% Similarity=0.518 Sum_probs=35.6
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
.|.|++|+.. -....|..|+...+. .+...|++|..... .++..|+...++
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 4888888887 456678888775432 35567888888654 578888766544
No 53
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=94.01 E-value=0.0027 Score=44.57 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=41.4
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~~ 97 (223)
.|.|+.|+.. -....|..|+...|. ...+|+.|..... .++..||...|+.
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~ 84 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKL 84 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4999999998 577899999998873 6789999998754 4789998766643
No 54
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.94 E-value=0.03 Score=34.84 Aligned_cols=37 Identities=19% Similarity=0.156 Sum_probs=29.0
Q ss_pred ceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccC
Q 027446 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAK 81 (223)
Q Consensus 43 ~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~ 81 (223)
..|.|++|+.. -....|..|+.. |.. .++-.|++|.+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C~k 48 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSSGPSSG 48 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG-SCS-CCCCCSCCCCC
T ss_pred cCeeCCCCCcccCCHHHHHHHHHh-cCC-CCCccCCCCCC
Confidence 46999999998 567889999875 543 46689999964
No 55
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.88 E-value=0.038 Score=33.83 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=26.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGG-TSC-SSCSCCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4999999998 566788889875 543 467889998
No 56
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=93.84 E-value=0.02 Score=39.43 Aligned_cols=51 Identities=24% Similarity=0.504 Sum_probs=38.5
Q ss_pred eeeCCC--CCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
.|.||+ |+.. -....|..|+...+. .+...|++|..... .++..|+...++
T Consensus 4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 4 PYACPVESCDRRFSQSGSLTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred ceECCCCCCCCccCCHHHHHHHHHHhCC--CCCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 589995 9998 567789999885432 45679999998764 588999865443
No 57
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.67 E-value=0.019 Score=41.44 Aligned_cols=49 Identities=22% Similarity=0.310 Sum_probs=38.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH 95 (223)
.|.|+.|+.. -....|..|+. |.. .+...|++|..... .++..|+...|
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H 93 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCE-YKKLTCLECMRTFKSSFSIWRHQVEVH 93 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCS-TGGGEEGGGTEECSSHHHHHHHHHHTS
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCC-CCCccCccccchhCCHHHHHHHHHHHc
Confidence 5999999998 56778889984 654 46689999998764 58999975455
No 58
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.67 E-value=0.036 Score=33.84 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=26.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-TSSC-CSCCSCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCCC
Confidence 5999999997 566788889874 5543 66789998
No 59
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.63 E-value=0.032 Score=34.07 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=26.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKI-HTK-QKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-TSC-CCCSSCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4999999998 566788899864 543 467789998
No 60
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.62 E-value=0.046 Score=33.34 Aligned_cols=34 Identities=24% Similarity=0.177 Sum_probs=26.4
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGGG-GSS-CCSSCSCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999998 556788899764 543 466789998
No 61
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.62 E-value=0.034 Score=40.02 Aligned_cols=50 Identities=20% Similarity=0.450 Sum_probs=39.2
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~ 96 (223)
.|.| .|+.. -....|..|+...+. .+...|++|..... .++..|+...++
T Consensus 10 ~~~C-~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 62 (110)
T 2csh_A 10 LYPC-QCGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIHTG 62 (110)
T ss_dssp CEEC-TTSCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHHTTTCC
T ss_pred CEec-cCCCccCCHHHHHHHHHHcCC--CcCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 5999 99998 567889999986443 35679999998765 589999876554
No 62
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.53 E-value=0.041 Score=33.70 Aligned_cols=34 Identities=18% Similarity=0.016 Sum_probs=26.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++..|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSC-SCCSSCCCC
T ss_pred CeECCcCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999998 567889999865 643 466789998
No 63
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.49 E-value=0.032 Score=34.07 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=26.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSMV-HTA-EKPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-TTC-CCSSSCCCC
T ss_pred CcCCCcCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5899999997 566788888764 544 366789988
No 64
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=93.48 E-value=0.046 Score=33.23 Aligned_cols=34 Identities=18% Similarity=0.055 Sum_probs=26.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .++..|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRV-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-GTS-CCCCSTTCC
T ss_pred CeECCccccccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999998 566888899765 543 456789998
No 65
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.47 E-value=0.033 Score=33.94 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=26.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|... |.. .++..|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT-HVD-DKHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-CCS-CCCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4999999998 566788889875 544 356789988
No 66
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.46 E-value=0.047 Score=33.29 Aligned_cols=34 Identities=18% Similarity=0.117 Sum_probs=26.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG-GTT-CCCSSTTCC
T ss_pred CccCCCccchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999997 566788899775 543 466789998
No 67
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.38 E-value=0.042 Score=33.65 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=26.4
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4899999997 566788899775 543 466789988
No 68
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.37 E-value=0.028 Score=34.36 Aligned_cols=34 Identities=18% Similarity=0.141 Sum_probs=26.4
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT-HAG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTT-SCCSCSSCC
T ss_pred CcCCCCCCcccCcHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 566788889775 543 466789998
No 69
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.33 E-value=0.039 Score=33.70 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=26.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. .....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRS-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCC-SSCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4999999998 567888999764 644 466789998
No 70
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.31 E-value=0.049 Score=33.13 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=26.4
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCC-CSCCSSCCC
T ss_pred CeECCCCChhhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 4999999998 566788899864 543 456789988
No 71
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=93.25 E-value=0.055 Score=39.54 Aligned_cols=51 Identities=24% Similarity=0.463 Sum_probs=38.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC--ccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV--Ca~~v~--~d~i~Hi~~qH~ 96 (223)
.|.|+.|+.. -....|..|+.. |.. .+...|++ |..... .++..|+...++
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 89 (124)
T 1ubd_C 34 VHVCAECGKAFVESSKLKRHQLV-HTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89 (124)
T ss_dssp CEECTTTCCEESSHHHHHHHGGG-TSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 5999999998 567889999885 432 45678987 998754 588899866554
No 72
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.24 E-value=0.035 Score=33.89 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=26.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~c 46 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCSSCCCC
T ss_pred CEeCCcCCCccCCHHHHHHHHHH-HCC-CCCCCCCCC
Confidence 5999999998 566778889874 543 367799998
No 73
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=93.16 E-value=0.033 Score=37.69 Aligned_cols=50 Identities=24% Similarity=0.444 Sum_probs=29.2
Q ss_pred eeC--CCCCcc-chhhhhhccccccCCCCCCccccCC--ccCccc--hhhhhhhhhccc
Q 027446 45 FLC--PFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 45 F~C--PfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV--Ca~~v~--~d~i~Hi~~qH~ 96 (223)
|.| +.|+.. -....|..|+.. |.. .+...|++ |..... .++..|+...++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHHH-hCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 567 667766 345666667653 332 34456766 766543 466667665554
No 74
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.14 E-value=0.032 Score=40.54 Aligned_cols=52 Identities=12% Similarity=0.066 Sum_probs=39.5
Q ss_pred cceeeCCCCCccc---hhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcc
Q 027446 42 NAMFLCPFCAEDF---DIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 42 ~~~F~CPfC~~~~---d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH 95 (223)
+..+.|+.|+..| ....|..|+.. |.. .+...|++|..... .++..|+...|
T Consensus 48 ~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh 104 (115)
T 2dmi_A 48 DNHETDNNNPKRWSKPRKRSLLEMEGK-EDA-QKVLKCMYCGHSFESLQDLSVHMIKTK 104 (115)
T ss_dssp SCCCCCCCCCSCCSSCCCCCCCCCCCS-CCC-CSSCBCSSSCCBCSSHHHHHHHHHHTT
T ss_pred CCCccCCCCCcccccccHHHHHHHhhc-cCC-CcceECCCCCCccCCHHHHHHHHHHhC
Confidence 4456799999876 67788999875 543 45679999998765 58999986655
No 75
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.13 E-value=0.035 Score=33.79 Aligned_cols=34 Identities=18% Similarity=0.084 Sum_probs=26.4
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQRI-HTGV-KPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHGG-GSCC-CSCSSCCC
T ss_pred CeECCCcChhhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 4899999997 566788889864 5543 66789998
No 76
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.09 E-value=0.047 Score=33.22 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=26.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTT-TTT-CSCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 4899999997 566778889764 544 356789988
No 77
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=93.08 E-value=0.059 Score=42.56 Aligned_cols=52 Identities=21% Similarity=0.289 Sum_probs=30.8
Q ss_pred eeeCC--CCCcc-chhhhhhccccccCCCCCCcccc--CCccCccc--hhhhhhhhhcc
Q 027446 44 MFLCP--FCAED-FDIVGLCCHIDEDHPIEAKNGVC--PVCAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CP--fC~~~-~d~~~L~~H~~~eH~~e~k~~VC--PVCa~~v~--~d~i~Hi~~qH 95 (223)
.|.|+ .|+.. .....|..|+...|....+..+| ++|..... .++..|+...+
T Consensus 72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 130 (190)
T 1tf6_A 72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130 (190)
T ss_dssp CEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS
T ss_pred ceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC
Confidence 36666 66665 55666666665566555555666 66666543 46666665433
No 78
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.08 E-value=0.052 Score=33.11 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=26.7
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4999999998 566888899764 543 466799998
No 79
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.02 E-value=0.041 Score=33.57 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=26.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .+...|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV-HTG-ERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT-SCS-CCSSCCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-hCC-CCCCCCCCC
Confidence 5999999998 566788899875 543 456789998
No 80
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.95 E-value=0.055 Score=33.00 Aligned_cols=34 Identities=26% Similarity=0.227 Sum_probs=26.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHTT-TTT-CCCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4899999997 556788889874 543 366789988
No 81
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.95 E-value=0.029 Score=34.30 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=26.7
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRT-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHH-HSS-CCCSSSCCC
T ss_pred CeECCCCCcccCchHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999998 566788899875 544 367789998
No 82
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=92.94 E-value=0.035 Score=33.98 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=25.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH-HSS-CCCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4899999997 566778888865 543 467789988
No 83
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.94 E-value=0.056 Score=33.02 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=26.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQRV-HMG-EKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGGG-GGS-CCCCCSCCC
T ss_pred CeeCcccCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 4899999998 566788889774 543 456789988
No 84
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.88 E-value=0.034 Score=33.96 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=26.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHC-SSCSSSCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999998 556778889764 543 366789998
No 85
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.84 E-value=0.036 Score=33.72 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=26.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|... |.. .+...|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQKC-HTG-ERHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHHH-HSC-CSSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 4899999997 556788899764 544 366789988
No 86
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=92.80 E-value=0.041 Score=33.65 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=26.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HSC-CSSCSCCCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4899999997 556788889775 543 466789988
No 87
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.76 E-value=0.064 Score=32.66 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=25.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRI-HSG-KKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS-CCCSCSSCC
T ss_pred CeeCCCcCCccCCHHHHHHHHHH-hcC-CCCCCCCCC
Confidence 4899999997 556778889875 543 456789988
No 88
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.70 E-value=0.054 Score=33.00 Aligned_cols=34 Identities=21% Similarity=0.163 Sum_probs=26.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGG-GSC-CCCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4999999997 566778889865 543 367789988
No 89
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=92.67 E-value=0.039 Score=43.62 Aligned_cols=47 Identities=26% Similarity=0.478 Sum_probs=15.9
Q ss_pred eeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhh
Q 027446 45 FLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITM 93 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~ 93 (223)
|.|+.|+.. -....|..|+...+. .+...|++|..... .++..|+..
T Consensus 22 ~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~ 71 (190)
T 2i13_A 22 YACPECGKSFSRSDHLAEHQRTHTG--EKPYKCPECGKSFSDKKDLTRHQRT 71 (190)
T ss_dssp ---------CCSSHHHHHGGGCC-----CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CcCCCCccccCCHHHHHHHHHHcCC--CCCccCCCcCchhCCHHHHHHHHHh
Confidence 555555554 233445555543221 23345555555432 345555443
No 90
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.64 E-value=0.05 Score=33.08 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=26.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERL-HSG-EKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHH-CCS-SSCCCCCCC
T ss_pred CeECCCCCCccCchHHHHHHHHh-cCC-CCCCCCCCC
Confidence 4899999997 566788889765 543 466789988
No 91
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=92.63 E-value=0.068 Score=32.63 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=26.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRM-HTR-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG-GCC-SSCCSCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4999999997 566788889765 543 456789988
No 92
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=92.55 E-value=0.041 Score=39.73 Aligned_cols=47 Identities=17% Similarity=0.331 Sum_probs=22.5
Q ss_pred eeCC--CCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhh
Q 027446 45 FLCP--FCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITM 93 (223)
Q Consensus 45 F~CP--fC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~ 93 (223)
|.|+ .|+.. -....|..|+...+ ..+...|++|..... .++..|+..
T Consensus 37 ~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 37 YQCDFKDCERRFSRSDQLKRHQRRHT--GVKPFQCKTCQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred ccCCCCCCcCccCCHHHHHHHHHHcC--CCCCccCCccCchhCCHHHHHHHHHH
Confidence 5555 35554 34455555555422 123345555555433 355555543
No 93
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.53 E-value=0.051 Score=33.12 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=26.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRI-HTG-YRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HTC-CCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4999999998 566778889764 543 456789998
No 94
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.50 E-value=0.074 Score=32.28 Aligned_cols=34 Identities=21% Similarity=0.138 Sum_probs=26.2
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQRV-HMG-EKCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHTT-TCC-SCSSCCSCC
T ss_pred CeECCCcCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4999999998 566788889764 543 456789988
No 95
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.50 E-value=0.068 Score=32.53 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=25.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~ 46 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TTT-SCCCCTTCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4999999997 566778889864 543 366789887
No 96
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.45 E-value=0.037 Score=33.88 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=26.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. -....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR-HFR-EKSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHS-TTSSCCSCC
T ss_pred CEEccccCcccCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 4899999998 566778889765 543 456789988
No 97
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=92.40 E-value=0.046 Score=36.93 Aligned_cols=47 Identities=21% Similarity=0.256 Sum_probs=37.3
Q ss_pred eeeCCC--CCcc-chhhhhhccccccCCCCCCccccCC---ccCccc--hhhhhhhhhcc
Q 027446 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPV---CAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCPV---Ca~~v~--~d~i~Hi~~qH 95 (223)
.|.||+ |++. .....|..|+...+. ..|++ |..... .++..|+...|
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 599999 9998 678889999976444 68999 988754 58999987655
No 98
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=92.39 E-value=0.083 Score=36.15 Aligned_cols=51 Identities=20% Similarity=0.399 Sum_probs=35.1
Q ss_pred ceeeCCC--CCcc-chhhhhhccccccCCCCCCccccC--CccCccc--hhhhhhhhhcc
Q 027446 43 AMFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCP--VCAKRVG--TDIVSHITMQH 95 (223)
Q Consensus 43 ~~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCP--VCa~~v~--~d~i~Hi~~qH 95 (223)
..|.|++ |+.. -....|..|+.. |.. .+...|| +|..... .++..|+...+
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~ 61 (89)
T 2wbs_A 4 ATHTCDYAGCGKTYTKSSHLKAHLRT-HTG-EKPYHCDWDGCGWKFARSDELTRHYRKHT 61 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHTT-SCS-SCCEECCSTTTCCEESSHHHHHHHHHHHH
T ss_pred CCeeCCCCCCCCcCCCHHHHHHHHHh-cCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcC
Confidence 4688988 9887 466778888875 332 3557887 5887654 57788875443
No 99
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.26 E-value=0.035 Score=34.08 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=25.7
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTG-QRPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHS-CCCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4899999997 556778888765 543 356789988
No 100
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.24 E-value=0.059 Score=32.74 Aligned_cols=34 Identities=18% Similarity=0.115 Sum_probs=26.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSC-CCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4899999998 566788889765 543 456789988
No 101
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=92.11 E-value=0.069 Score=36.57 Aligned_cols=47 Identities=17% Similarity=0.369 Sum_probs=36.0
Q ss_pred eeeCCC--CCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhh
Q 027446 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHIT 92 (223)
Q Consensus 44 ~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~ 92 (223)
.|.||+ |+.. -....|..|+.. |.. .+...|++|..... .++..|+.
T Consensus 35 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~ 86 (89)
T 2wbs_A 35 PYHCDWDGCGWKFARSDELTRHYRK-HTG-HRPFQCQKCDRAFSRSDHLALHMK 86 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHGG
T ss_pred CcCCCCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCcccCCHHHHHHHHH
Confidence 599986 9998 467788899864 543 35679999998754 58888864
No 102
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=92.09 E-value=0.058 Score=38.91 Aligned_cols=47 Identities=28% Similarity=0.476 Sum_probs=36.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCcccc--CCccCccc--hhhhhhhh
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVC--PVCAKRVG--TDIVSHIT 92 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VC--PVCa~~v~--~d~i~Hi~ 92 (223)
.|.|+.|+.. -....|..|+.. |.. .+...| |+|..... .++..|++
T Consensus 66 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~ 117 (119)
T 2jp9_A 66 PFQCKTCQRKFSRSDHLKTHTRT-HTG-EKPFSCRWPSCQKKFARSDELVRHHN 117 (119)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHT-CCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred CccCCccCchhCCHHHHHHHHHH-hcC-CCCeeCCCCCCccccCCHHHHHHHHh
Confidence 5999999998 577889999985 433 345789 89999765 58888875
No 103
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.05 E-value=0.061 Score=32.45 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=26.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HAE-EKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HTS-SCSCSCCCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4899999997 566788889775 543 456789988
No 104
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.05 E-value=0.074 Score=40.26 Aligned_cols=52 Identities=21% Similarity=0.224 Sum_probs=28.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCC-CCCccccCCcc-----Ccc--chhhhhhhhhcc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPI-EAKNGVCPVCA-----KRV--GTDIVSHITMQH 95 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~-e~k~~VCPVCa-----~~v--~~d~i~Hi~~qH 95 (223)
.|.|+.|+.. -....|..|+...|.. +.+..+|++|. ... ...+..|+...+
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~ 63 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcC
Confidence 4667777776 4566677777654322 23445666432 322 235666665433
No 105
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=91.96 E-value=0.046 Score=33.27 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=27.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCcc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCA 80 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa 80 (223)
.|.|+.|+.. .....|..|+.. |.. .+...||+|.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~cg 45 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS-HDG-SVGKSGPSSG 45 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH-HSC-CCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHH-ccC-CCCCCCcCCC
Confidence 5899999998 567788889875 443 4567999993
No 106
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.85 E-value=0.052 Score=33.11 Aligned_cols=34 Identities=18% Similarity=0.148 Sum_probs=25.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH-HHC-CSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4899999997 566778888765 543 456789988
No 107
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.70 E-value=0.053 Score=33.05 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=25.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRRV-HTG-GKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTHH-HHS-CCCSCSCCC
T ss_pred CeECCcCCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999997 566778888764 543 366789988
No 108
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.46 E-value=0.084 Score=32.11 Aligned_cols=34 Identities=29% Similarity=0.217 Sum_probs=25.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. .....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVL-HMG-QKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HSC-CSCCCTTCC
T ss_pred CEEccccChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999998 556778889765 433 456789988
No 109
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=91.38 E-value=0.053 Score=41.96 Aligned_cols=52 Identities=21% Similarity=0.254 Sum_probs=41.7
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhcccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~qH~~ 97 (223)
.|.|++|+.. .....|..|+.. |.. .++.+|++|..... .+|..|+...|+-
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEIH-HTG-ERRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HHT-CCCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred CeeCCccCeecccccchhhhccc-cCC-CccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 5999999998 567789999764 654 35689999999865 5899999888864
No 110
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=91.35 E-value=0.15 Score=38.71 Aligned_cols=51 Identities=24% Similarity=0.320 Sum_probs=38.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC--ccCccc--hhhhhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV--Ca~~v~--~d~i~Hi~~qH~ 96 (223)
.|.|+.|+.. -....|..|+...+ ..+...|++ |..... .++..|+...++
T Consensus 62 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~ 117 (155)
T 2rpc_A 62 WEECPREGKSFKAKYKLVNHIRVHT--GEKPFPCPFPGCGKIFARSENLKIHKRTHTG 117 (155)
T ss_dssp BTTCTTSSCCCSSHHHHHHHTHHHH--CCCSEECSCTTTCCEESCHHHHHHHHTTTCS
T ss_pred ccCCCCcccccCCHHHHHHHHHhcC--CCCcccCCcCCCCCccCCHHHHHHHHHhhCC
Confidence 3899999997 56778889988543 245678988 988754 588899876554
No 111
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.31 E-value=0.064 Score=32.78 Aligned_cols=34 Identities=18% Similarity=0.107 Sum_probs=26.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRV-HTG-EKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HHC-CCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 5999999997 556788889875 543 456789988
No 112
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=91.25 E-value=0.17 Score=35.34 Aligned_cols=49 Identities=20% Similarity=0.359 Sum_probs=37.6
Q ss_pred eeeCCC--CCcc-chhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhc
Q 027446 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQ 94 (223)
Q Consensus 44 ~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~q 94 (223)
.|.||+ |+.. .....|..|+... .. .+...|++|..... .++..|+...
T Consensus 45 ~~~C~~~~C~~~f~~~~~l~~H~~~h-~~-~~~~~C~~C~~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 45 PYKCTWEGCDWRFARSDELTRHYRKH-TG-AKPFQCGVCNRSFSRSDHLALHMKRH 98 (100)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHHH-TS-CCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred CeeCCCCCCCCccCCHHHHHHHHHHh-CC-CCCeECCCCcCccCCHHHHHHHHHHh
Confidence 599986 9997 5778899998754 33 35679999998764 5888997654
No 113
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.24 E-value=0.025 Score=37.28 Aligned_cols=43 Identities=16% Similarity=0.199 Sum_probs=29.5
Q ss_pred eeeCCCCCccchhhhhhccccccCCCCCCccccCCccCccc--hhhhhhhhhc
Q 027446 44 MFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQ 94 (223)
Q Consensus 44 ~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~--~d~i~Hi~~q 94 (223)
.|.|+.|+..|.....+.- .+...|++|..... .++..|+...
T Consensus 18 ~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H 62 (73)
T 2ctu_A 18 SQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNE 62 (73)
T ss_dssp EEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCC
T ss_pred CeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhh
Confidence 5999999998654333221 45679999988754 4777776543
No 114
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.11 E-value=0.043 Score=33.56 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=25.6
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+.|+.. .....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWIT-HTR-EKPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTH-HHH-CCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4899999997 566788888775 443 356789988
No 115
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.06 E-value=0.093 Score=31.98 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=25.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|++|+.. .....|..|+.. |.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~~ 46 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCSSCSSCC
T ss_pred CEECCcCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4899999997 566778888765 543 356789887
No 116
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=90.90 E-value=0.13 Score=35.67 Aligned_cols=49 Identities=20% Similarity=0.320 Sum_probs=29.8
Q ss_pred CCCCccceeeCCCCCccchhhh--hhccccccCCC----CCCccccCCccCccch
Q 027446 37 GDDDLNAMFLCPFCAEDFDIVG--LCCHIDEDHPI----EAKNGVCPVCAKRVGT 85 (223)
Q Consensus 37 ~d~d~~~~F~CPfC~~~~d~~~--L~~H~~~eH~~----e~k~~VCPVCa~~v~~ 85 (223)
|+++....|.||.|.+.+.... -|-|.-...+. ......||+|...+..
T Consensus 1 g~~~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 1 GSPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp CCCCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred CCcCCcccCCCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 3456778999999998754332 23332221111 2236789999998763
No 117
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.65 E-value=0.11 Score=35.40 Aligned_cols=48 Identities=21% Similarity=0.422 Sum_probs=28.9
Q ss_pred CCccceeeCCCCCccchhh-h-hhccc-----cccCCCC-CCccccCCccCccchh
Q 027446 39 DDLNAMFLCPFCAEDFDIV-G-LCCHI-----DEDHPIE-AKNGVCPVCAKRVGTD 86 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~-~-L~~H~-----~~eH~~e-~k~~VCPVCa~~v~~d 86 (223)
++....+.||.|.+.+... . -|-|. ...+-.. .....||+|...+..+
T Consensus 15 ~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 15 NKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCC
T ss_pred HhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcc
Confidence 4566788999999875532 2 24442 2211111 3456899999887643
No 118
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=90.10 E-value=0.18 Score=39.61 Aligned_cols=51 Identities=24% Similarity=0.445 Sum_probs=40.0
Q ss_pred eeeC--CCCCcc-chhhhhhccccccCCCCCCccccCC--ccCccc--hhhhhhhhhccc
Q 027446 44 MFLC--PFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQHG 96 (223)
Q Consensus 44 ~F~C--PfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV--Ca~~v~--~d~i~Hi~~qH~ 96 (223)
.|.| +.|+.. -....|..|+.. |.. .+...||+ |..... .++..|+.+.++
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGG-GSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred eeeCCCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 5899 779997 677889999886 433 45679988 999865 589999987665
No 119
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=89.83 E-value=0.39 Score=31.77 Aligned_cols=50 Identities=22% Similarity=0.434 Sum_probs=37.0
Q ss_pred ccceeeCCC--CCcc-chhhhhhccccccCCCCCCccccCC--ccCccc--hhhhhhhh
Q 027446 41 LNAMFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHIT 92 (223)
Q Consensus 41 ~~~~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCPV--Ca~~v~--~d~i~Hi~ 92 (223)
....|.|++ |+.. -....|..|+.. |.. .+...|++ |..... .++..|+.
T Consensus 14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 14 RIRSHICSHPGCGKTYFKSSHLKAHTRT-HTG-EKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CCCCEECSSTTTCCEESSHHHHHHHHHH-HSS-SCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred ccCceeCCCCCCccccCCHHHHHHHHHh-cCC-CCCccCCCCCCCcccCCHHHHHhHhh
Confidence 345799998 9998 567789999875 433 46679976 998764 57788864
No 120
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=88.71 E-value=0.18 Score=33.30 Aligned_cols=37 Identities=24% Similarity=0.503 Sum_probs=25.5
Q ss_pred eeeCCCCCccchhhhhhccccccCCCCCCccccCCccCccc
Q 027446 44 MFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (223)
Q Consensus 44 ~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~ 84 (223)
.|.||.|+..|....-.. ..|.. .+...|++|.....
T Consensus 14 ~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f~ 50 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEVE 50 (62)
T ss_dssp EEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBCE
T ss_pred CccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCccc
Confidence 599999999865543322 34543 46789999998654
No 121
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=88.32 E-value=0.15 Score=31.84 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=23.6
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIE 70 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e 70 (223)
-|.||.|-++ -....|..|-+..|..+
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 5999999998 78889999999999864
No 122
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.95 E-value=0.31 Score=29.31 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=21.2
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE-NPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS-CCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 4788888887 455677777764 4432 4566764
No 123
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=86.71 E-value=0.36 Score=31.99 Aligned_cols=35 Identities=23% Similarity=0.594 Sum_probs=22.2
Q ss_pred ceeeCCCCCccchhhhhhccccccCCCCCCc--cccCCccCc
Q 027446 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKN--GVCPVCAKR 82 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~--~VCPVCa~~ 82 (223)
..|.|+.||--+|...--. .+++.-. -+||+|.+.
T Consensus 3 ~~y~C~vCGyvyd~~~Gd~-----t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 3 QKYVCNVCGYEYDPAEHDN-----VPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CCEEETTTCCEECGGGGTT-----CCGGGSCTTCBCTTTCCB
T ss_pred CEEECCCCCeEEeCCcCCC-----cchhhCCCCCcCcCCCCc
Confidence 3688999998777542211 3444433 499999874
No 124
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.61 E-value=0.24 Score=29.92 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=22.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4888888887 556677788764 443 35567765
No 125
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.43 E-value=0.42 Score=29.00 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=22.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSV-HSG-ERPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTT-TTS-CCSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHHh-cCC-CCCCCCCC
Confidence 4788888887 555677788764 543 34567764
No 126
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.29 E-value=0.49 Score=28.42 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=22.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~p~~C~~ 45 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRR-IHTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGG-GTSSC-CSSCCCC
T ss_pred CEECCCCChhhCChHHHHHHHH-hcCCC-CCcCCCC
Confidence 4889999887 56677888876 45433 5567765
No 127
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.17 E-value=0.41 Score=28.88 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=22.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRI-HRGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG-GCSC-CCCSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHhH-hCCC-CCCCCCC
Confidence 4888888887 456777788664 5433 4566764
No 128
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.82 E-value=0.43 Score=28.77 Aligned_cols=33 Identities=21% Similarity=0.216 Sum_probs=21.2
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. -....|..|+.. |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGG-GCCC-CCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 4788888887 455667778754 4433 4556764
No 129
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=85.54 E-value=0.54 Score=32.20 Aligned_cols=47 Identities=26% Similarity=0.466 Sum_probs=28.4
Q ss_pred CCccceeeCCCCCccchhhh-h-hcc-----ccccCCCC-----CCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFDIVG-L-CCH-----IDEDHPIE-----AKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~-L-~~H-----~~~eH~~e-----~k~~VCPVCa~~v~~ 85 (223)
++....+.||.|.+.+.... | |-| |...+-.. .....||+|...+..
T Consensus 7 ~~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 7 GNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred hhcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 34566789999998755432 2 333 22222211 226789999998764
No 130
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.49 E-value=0.47 Score=28.57 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=22.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKI-HTG-ERPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TSC-CCCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4888888887 456777788764 543 35566764
No 131
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=85.47 E-value=0.14 Score=36.63 Aligned_cols=45 Identities=22% Similarity=0.513 Sum_probs=28.0
Q ss_pred CCccceeeCCCCCccchh-hhh--hccc-----cccCCCCCCccccCCccCcc
Q 027446 39 DDLNAMFLCPFCAEDFDI-VGL--CCHI-----DEDHPIEAKNGVCPVCAKRV 83 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~-~~L--~~H~-----~~eH~~e~k~~VCPVCa~~v 83 (223)
++....|.||.|.+.|.. ..| |-|. -..+-.......||+|...+
T Consensus 8 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 8 DPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred ccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 466778999999987443 333 4452 22222123346899999885
No 132
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=85.37 E-value=0.32 Score=32.51 Aligned_cols=38 Identities=21% Similarity=0.362 Sum_probs=29.9
Q ss_pred eeeCCC--CCcc-chhhhhhccccccCCCCCCccccCCccCcc
Q 027446 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRV 83 (223)
Q Consensus 44 ~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v 83 (223)
.|.|+. |+.. -....|..|+.. |.. .+.-.|++|....
T Consensus 38 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~F 78 (79)
T 2dlk_A 38 SFSCPEPACGKSFNFKKHLKEHMKL-HSD-TRDYICEFSGPSS 78 (79)
T ss_dssp CEECSCTTTCCEESSHHHHHHHHHH-HHT-SCCCSCCSSSCCC
T ss_pred CeECCCCCCcCccCCHHHHHHHHHH-hCC-CCCeeCCCCCCCC
Confidence 599999 9998 567889999985 443 3668999998753
No 133
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=85.01 E-value=0.36 Score=35.73 Aligned_cols=45 Identities=20% Similarity=0.508 Sum_probs=30.1
Q ss_pred CCCCCCCCCC-ccceeeCCCCCcc--chhhhhhccccccCCCCCCccccCCccCccc
Q 027446 31 GYDETDGDDD-LNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (223)
Q Consensus 31 ~~~~~~~d~d-~~~~F~CPfC~~~--~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~ 84 (223)
.++|++-+++ ..-.|+|| ||.. +....|... .--+.||-|+-.+.
T Consensus 16 ~LeDm~~de~~~~y~y~Cr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 63 (83)
T 1wge_A 16 EIEDFQYDEDSETYFYPCP-CGDNFAITKEDLENG--------EDVATCPSCSLIIK 63 (83)
T ss_dssp EGGGSCCBTTTTEEEECCS-SSSCEEEEHHHHHTT--------CCEEECTTTCCEEE
T ss_pred EHHHceEccCCCEEEEeCC-CCCEEEECHHHHhCC--------CEEEECCCCceEEE
Confidence 4566655443 35689999 9986 666677432 12578999999764
No 134
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.83 E-value=0.2 Score=35.07 Aligned_cols=47 Identities=19% Similarity=0.406 Sum_probs=28.0
Q ss_pred CCCccceeeCCCCCccchhhhh--hccccccCCCC---CCccccCCccCccc
Q 027446 38 DDDLNAMFLCPFCAEDFDIVGL--CCHIDEDHPIE---AKNGVCPVCAKRVG 84 (223)
Q Consensus 38 d~d~~~~F~CPfC~~~~d~~~L--~~H~~~eH~~e---~k~~VCPVCa~~v~ 84 (223)
+++....+.||.|...+....+ |-|.-=..+.. .+...||+|...+.
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 9 SEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp SSCCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred cccCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 3556668999999987544322 44422111110 12457999999876
No 135
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.82 E-value=0.54 Score=28.39 Aligned_cols=33 Identities=24% Similarity=0.225 Sum_probs=20.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. -....|..|+.. |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGG-GTTC-CCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 4778888876 455667777654 4332 4556654
No 136
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=84.76 E-value=0.61 Score=32.10 Aligned_cols=47 Identities=30% Similarity=0.667 Sum_probs=30.0
Q ss_pred CCccceeeCCCCCccchhh-----hhhccccccCCCC---CCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFDIV-----GLCCHIDEDHPIE---AKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~-----~L~~H~~~eH~~e---~k~~VCPVCa~~v~~ 85 (223)
++....+.||.|.+.|... .-|.|.-=.++.. .+...||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 10 EHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp TTSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred ccCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCC
Confidence 3445678999998876532 1377754444442 134689999987654
No 137
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.65 E-value=0.53 Score=28.32 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=21.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRGI-HTG-EKPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHTT-TTT-SSCCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHHh-hCC-CCCCCCCC
Confidence 4888888887 556677778653 543 35566764
No 138
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.63 E-value=0.53 Score=28.24 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=21.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSS-CCSSCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 4888888887 455677788764 543 34566764
No 139
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=84.59 E-value=0.4 Score=25.73 Aligned_cols=26 Identities=23% Similarity=0.379 Sum_probs=17.9
Q ss_pred eeeCCCCCccc-hhhhhhccccccCCC
Q 027446 44 MFLCPFCAEDF-DIVGLCCHIDEDHPI 69 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~~eH~~ 69 (223)
.|.|+.|+..| ....|..|+...|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~ 28 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccC
Confidence 37899998874 557777885445643
No 140
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=84.54 E-value=0.39 Score=34.67 Aligned_cols=29 Identities=34% Similarity=0.827 Sum_probs=25.4
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAK 72 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k 72 (223)
.|.|++|++. .....|..|+...|+.|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 5999999998 6888999999999998754
No 141
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.51 E-value=0.55 Score=28.33 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=22.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSC-CCCCSSCC
T ss_pred CeECCcCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4889999887 556778888764 543 35567764
No 142
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.34 E-value=0.52 Score=28.27 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=22.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |.. .+.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRT-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-SCS-SSSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4888888887 566777788764 543 34556764
No 143
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.28 E-value=0.38 Score=28.94 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=21.6
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQAT-HSG-EKPSGPSS 45 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHHH-HCC-CSCSCTTC
T ss_pred CeeccccCChhcCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 4888888887 556677778764 433 35566764
No 144
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.85 E-value=0.52 Score=28.38 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=21.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRGI-HTG-EKPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTT-TSC-SCCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHhHh-cCC-CCCCCCCC
Confidence 4788888887 455667777653 543 35566764
No 145
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=83.69 E-value=0.38 Score=36.13 Aligned_cols=45 Identities=18% Similarity=0.477 Sum_probs=30.1
Q ss_pred CCCCCCCCC-CccceeeCCCCCcc--chhhhhhccccccCCCCCCccccCCccCccc
Q 027446 31 GYDETDGDD-DLNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (223)
Q Consensus 31 ~~~~~~~d~-d~~~~F~CPfC~~~--~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~ 84 (223)
.++|++-++ +..-.|+|| ||.. +....|... .--+.||-|+-.+.
T Consensus 9 ~LeDm~~de~~~~y~ypCr-CGd~F~IteedLe~g--------e~iv~C~sCSL~Ik 56 (89)
T 2jr7_A 9 EIEDFQYDEDSETYFYPCP-CGDNFSITKEDLENG--------EDVATCPSCSLIIK 56 (89)
T ss_dssp ETTTSEEETTTTEEEEECT-TSSEEEEEHHHHHHT--------CCEEECTTTCCEEE
T ss_pred EHHHcEEcCCCCEEEEcCC-CCCEEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 355665433 345689999 9986 666677432 12578999999865
No 146
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.55 E-value=0.47 Score=28.65 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=20.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|... |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRS-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 4788888876 445667777654 432 34556664
No 147
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.44 E-value=0.5 Score=28.39 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=22.7
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQRI-HTG-EKSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHTT-TSS-CCCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHHH-hCC-CCCCCCCC
Confidence 4889999987 455678888764 543 35567764
No 148
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.41 E-value=0.66 Score=27.98 Aligned_cols=34 Identities=24% Similarity=0.197 Sum_probs=22.2
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. -....|..|.. .|....+.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence 4888888887 45577777875 3544234566764
No 149
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.30 E-value=0.63 Score=27.98 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=21.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQVI-HTG-EKPSGPSS 45 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHTT-TCC-SCCSSCCC
T ss_pred CeECCcCChhhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4788888887 455677778763 543 34556664
No 150
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=82.74 E-value=0.68 Score=27.17 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=18.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCP 77 (223)
.|.|+.|+.. -....|..|+.. |..+ ++-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT-HAGE-SGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCCC-CSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 3777777776 444566667653 4332 344554
No 151
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=82.29 E-value=0.55 Score=28.34 Aligned_cols=33 Identities=21% Similarity=0.158 Sum_probs=21.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HTT-SCSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4788888887 455677777664 433 34556764
No 152
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.18 E-value=1.4 Score=29.32 Aligned_cols=47 Identities=13% Similarity=0.277 Sum_probs=28.4
Q ss_pred CCccceeeCCCCCccchhhh--hhccccccCCC----CCCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFDIVG--LCCHIDEDHPI----EAKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~--L~~H~~~eH~~----e~k~~VCPVCa~~v~~ 85 (223)
+.....+.||.|.+.+.... -|-|.-=..+. ...+..||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 10 KTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CSCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred hcCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 34566899999998754332 23342211111 2456689999988764
No 153
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.83 E-value=0.79 Score=29.44 Aligned_cols=19 Identities=21% Similarity=0.429 Sum_probs=13.6
Q ss_pred CCccceeeCCCCCccchhh
Q 027446 39 DDLNAMFLCPFCAEDFDIV 57 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~ 57 (223)
++....+.||.|.+.+...
T Consensus 10 ~~~~~~~~C~IC~~~~~~p 28 (58)
T 2ecj_A 10 ENLQVEASCSVCLEYLKEP 28 (58)
T ss_dssp SCSCCCCBCSSSCCBCSSC
T ss_pred hccccCCCCccCCcccCcc
Confidence 4556678999999875543
No 154
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.70 E-value=0.46 Score=28.53 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=21.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. -....|..|+.. |.. .++-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~kp~~C~~ 45 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHS-CCCSSSTT
T ss_pred CccCCCCCCCcCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 4788888887 455667777654 433 34556765
No 155
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=81.62 E-value=0.77 Score=30.89 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=29.7
Q ss_pred ceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCc
Q 027446 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 43 ~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
..|.|+.|+.. .....|..|+...|. .+...|++|...
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~~~~~~~~ 84 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCAG--PDGVEGENSGPS 84 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCCC--CCSCCCCCCCCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHccC--CCCcccCCCCCC
Confidence 46999999998 577889999987554 345689998764
No 156
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=81.56 E-value=1.3 Score=32.94 Aligned_cols=45 Identities=18% Similarity=0.129 Sum_probs=26.1
Q ss_pred CCccceeeCCCCCccchh-hhh-hccccc-----cCCCCCCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFDI-VGL-CCHIDE-----DHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~-~~L-~~H~~~-----eH~~e~k~~VCPVCa~~v~~ 85 (223)
.+.+..|.||.|.+-+.. +.+ |-|.-+ .|- . .+..||+|...+..
T Consensus 24 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l-~-~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 24 SDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHL-L-NSPTDPFNRQTLTE 75 (100)
T ss_dssp SSCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHT-T-SCSBCSSSCCBCCT
T ss_pred ccCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHH-H-cCCCCCCCCCCCCh
Confidence 456789999999875322 222 222211 111 1 25689999998663
No 157
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=81.49 E-value=0.86 Score=36.16 Aligned_cols=45 Identities=29% Similarity=0.456 Sum_probs=26.9
Q ss_pred eeeCC--CCCccchhhhhhccccccCCCCCCccccCCccCccc-hhhhhhh
Q 027446 44 MFLCP--FCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG-TDIVSHI 91 (223)
Q Consensus 44 ~F~CP--fC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~-~d~i~Hi 91 (223)
.+.|| -|.+.+....|..|.. + -+-+.+.||-|...+. .++..|+
T Consensus 82 ~v~C~n~GC~~~~~~~~l~~H~~-~--C~~~~v~C~~C~~~~~r~~l~~H~ 129 (170)
T 3hcs_A 82 MVKCPNEGCLHKMELRHLEDHQA-H--CEFALMDCPQCQRPFQKFHINIHI 129 (170)
T ss_dssp EEECCSTTCCCEEEGGGHHHHHT-T--CTTSEEECTTTCCEEEGGGHHHHH
T ss_pred ccCCCCCCCCceecHhHHHHHHh-c--CCceeeECCCCChHHHHHHHHHHh
Confidence 45674 4776677777777752 1 1234566777777543 4666664
No 158
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.26 E-value=0.56 Score=31.04 Aligned_cols=18 Identities=22% Similarity=0.711 Sum_probs=13.7
Q ss_pred CCccceeeCCCCCccchh
Q 027446 39 DDLNAMFLCPFCAEDFDI 56 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~ 56 (223)
++....+.||.|.+.+..
T Consensus 15 ~~~~~~~~C~IC~~~~~~ 32 (63)
T 2ysj_A 15 NKLQEEVICPICLDILQK 32 (63)
T ss_dssp CCCCCCCBCTTTCSBCSS
T ss_pred HhCccCCCCCcCCchhCC
Confidence 456678899999987554
No 159
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=81.07 E-value=1.1 Score=32.08 Aligned_cols=44 Identities=9% Similarity=-0.013 Sum_probs=25.6
Q ss_pred CCccceeeCCCCCccchhhhhhccccccCCCCC--------CccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEA--------KNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~--------k~~VCPVCa~~v~~ 85 (223)
.+.+..|.||.|.+-+....... .-|.|+. .+..||+|...+..
T Consensus 9 ~~~p~~~~CpI~~~~m~dPV~~~---cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 9 SDAPDEFRDPLMDTLMTDPVRLP---SGTVMDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp TTCCTTTBCTTTCSBCSSEEECT---TSCEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred hcCchheECcccCchhcCCeECC---CCCEECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 45678999999887533222211 1222211 14689999988663
No 160
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=80.93 E-value=1.4 Score=32.57 Aligned_cols=45 Identities=20% Similarity=0.151 Sum_probs=26.8
Q ss_pred CCccceeeCCCCCccc-hhhhh-hc-cccc-----cCCCCCCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDF-DIVGL-CC-HIDE-----DHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~-d~~~L-~~-H~~~-----eH~~e~k~~VCPVCa~~v~~ 85 (223)
.+.+..|.||.|.+-+ |-+.+ |- |.-+ .|- . .+..||+|...+..
T Consensus 17 ~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l-~-~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHL-L-SDQTDPFNRSPLTM 69 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHT-T-TSCBCTTTCSBCCT
T ss_pred hcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHH-H-hCCCCCCCCCCCCh
Confidence 4567899999998753 32222 22 3221 111 1 25689999998763
No 161
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.92 E-value=0.65 Score=27.74 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=20.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. .....|..|... |.. .+...|+|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 43 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTLQ-THS-DKSGPSSG 43 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHHH-HTC-TTCSSSCC
T ss_pred CEECCCCCCeeCChHHHHHHHHh-hCC-CCCccCCC
Confidence 4788888887 455667777664 432 34556664
No 162
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.86 E-value=0.53 Score=28.43 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=21.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|++|+.. -....|..|+.. |.. .+.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV-HTQ-ETLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH-HSS-CCSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4888888887 556677778664 433 24456664
No 163
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.83 E-value=1.1 Score=27.01 Aligned_cols=34 Identities=21% Similarity=0.097 Sum_probs=26.0
Q ss_pred eeeCC--CCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 44 MFLCP--FCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 44 ~F~CP--fC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
.|.|+ .|+.. .....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 48 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS-HSG-VKPSGPSSG 48 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT-SCC-CCSCSSCCC
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 58997 89997 566788899875 543 456789988
No 164
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=80.76 E-value=0.52 Score=34.99 Aligned_cols=37 Identities=30% Similarity=0.692 Sum_probs=23.5
Q ss_pred CccceeeCCCCCcc--chhhhhhccccccCCCCCCccccCCccCcc
Q 027446 40 DLNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRV 83 (223)
Q Consensus 40 d~~~~F~CPfC~~~--~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v 83 (223)
-+...|.||||+-+ +.+. -+.....-.+.|-||....
T Consensus 19 ~L~t~F~CPfCnh~~sV~vk-------idk~~~~g~l~C~~Cg~~~ 57 (85)
T 1wii_A 19 TLETQFTCPFCNHEKSCDVK-------MDRARNTGVISCTVCLEEF 57 (85)
T ss_dssp CCSSCCCCTTTCCSSCEEEE-------EETTTTEEEEEESSSCCEE
T ss_pred CCCCeEcCCCCCCCCeEEEE-------EEccCCEEEEEcccCCCeE
Confidence 35578999999975 3332 1222223446799999864
No 165
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=80.39 E-value=1 Score=30.80 Aligned_cols=51 Identities=29% Similarity=0.509 Sum_probs=35.6
Q ss_pred eeCCC--CCcc-chhhhhhccccccCCCCC-----CccccC--CccCcc--chhhhhhhhhcc
Q 027446 45 FLCPF--CAED-FDIVGLCCHIDEDHPIEA-----KNGVCP--VCAKRV--GTDIVSHITMQH 95 (223)
Q Consensus 45 F~CPf--C~~~-~d~~~L~~H~~~eH~~e~-----k~~VCP--VCa~~v--~~d~i~Hi~~qH 95 (223)
|.|-. |++. -....|+.|+..+|-... .+.+|. -|.... ...|+.||+..|
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 34444 8887 456679999998896543 356786 777653 257999998776
No 166
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.34 E-value=0.97 Score=27.18 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=21.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. -....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQR-VHTG-EKPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHT-TTSS-SCCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence 4788888887 45567777765 3543 34556664
No 167
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.19 E-value=0.73 Score=27.75 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=21.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-HTS-SCCCSCCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 4788888887 455667777664 433 34556764
No 168
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=80.03 E-value=0.95 Score=32.36 Aligned_cols=31 Identities=16% Similarity=0.585 Sum_probs=23.4
Q ss_pred ccceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCcc
Q 027446 41 LNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRV 83 (223)
Q Consensus 41 ~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v 83 (223)
..-+|.|+-|+.+|++. +...+.||-|..++
T Consensus 25 ~~v~Y~C~~CG~~~e~~------------~~d~irCp~CG~RI 55 (70)
T 1twf_L 25 ATLKYICAECSSKLSLS------------RTDAVRCKDCGHRI 55 (70)
T ss_dssp CCCCEECSSSCCEECCC------------TTSTTCCSSSCCCC
T ss_pred ceEEEECCCCCCcceeC------------CCCCccCCCCCceE
Confidence 56789999999998753 22356899998753
No 169
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.54 E-value=0.9 Score=26.80 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=18.2
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCP 77 (223)
.|.|++|+.. -....|..|+.. |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTGE-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTTS-SCSCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCCC-CCCCCC
Confidence 3777777776 445666677653 4332 334453
No 170
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.43 E-value=0.62 Score=31.68 Aligned_cols=49 Identities=18% Similarity=0.344 Sum_probs=29.3
Q ss_pred ccceeeCCCCCccchh-hhh-hccccccCCC---CCCccccCCccCccchhhhh
Q 027446 41 LNAMFLCPFCAEDFDI-VGL-CCHIDEDHPI---EAKNGVCPVCAKRVGTDIVS 89 (223)
Q Consensus 41 ~~~~F~CPfC~~~~d~-~~L-~~H~~~eH~~---e~k~~VCPVCa~~v~~d~i~ 89 (223)
....+.||.|.+.+.. ..| |-|.-=..+. -.+...||+|...+..+.+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 65 (71)
T 2d8t_A 12 SLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLD 65 (71)
T ss_dssp SSSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHHS
T ss_pred CCCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhcc
Confidence 3456899999987443 222 5553211111 12346899999998876543
No 171
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=79.42 E-value=0.44 Score=35.28 Aligned_cols=45 Identities=18% Similarity=0.465 Sum_probs=29.0
Q ss_pred CCCCCCCCC-CccceeeCCCCCcc--chhhhhhccccccCCCCCCccccCCccCccc
Q 027446 31 GYDETDGDD-DLNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (223)
Q Consensus 31 ~~~~~~~d~-d~~~~F~CPfC~~~--~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~ 84 (223)
.++|++-++ +..-.|+|| ||.. +....|... ---+.||-|+-.+.
T Consensus 9 ~leDm~~de~~~~y~ypCr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 56 (83)
T 1yop_A 9 EIEDMTFEPENQMFTYPCP-CGDRFQIYLDDMFEG--------EKVAVCPSCSLMID 56 (83)
T ss_dssp BGGGSEEETTTTEEEEEET-TTEEEEEEHHHHHTT--------CCEEECSSSCCEEE
T ss_pred EHHHcEEcCCCCEEEEeCC-CCCeEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 344554333 334689999 9974 666677432 12478999999765
No 172
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=79.28 E-value=0.99 Score=28.49 Aligned_cols=28 Identities=18% Similarity=0.207 Sum_probs=23.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEA 71 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~ 71 (223)
.|.|++|+.. -....|..|+...|..+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 5999999998 567889999887887553
No 173
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=79.21 E-value=0.69 Score=30.98 Aligned_cols=29 Identities=28% Similarity=0.537 Sum_probs=24.4
Q ss_pred ceeeCCCCCcc-chhhhhhccccccCCCCC
Q 027446 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEA 71 (223)
Q Consensus 43 ~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~ 71 (223)
..|.|++|+.. .....|..|+...|..+.
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred CccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 36999999998 567899999999898754
No 174
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.88 E-value=0.22 Score=32.55 Aligned_cols=36 Identities=14% Similarity=0.094 Sum_probs=27.4
Q ss_pred cceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCc
Q 027446 42 NAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (223)
Q Consensus 42 ~~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVC 79 (223)
...|.|+.|+.. -....|..|+.. |.. .+...|++|
T Consensus 37 ~~~~~C~~C~~~f~~~~~l~~H~~~-H~~-~~~~~C~~C 73 (73)
T 2ctu_A 37 RKTPMCEKCRKDSCQEAALNKDEGN-ESG-KKTSGPSSG 73 (73)
T ss_dssp SSSCCCHHHHHTCSCCCSSCCCSSC-CCC-CCCSSCCCC
T ss_pred CCCCCCCCCChhhcCHHHHHHHHHh-hcC-CCCCCCCCC
Confidence 346999999998 566788899875 543 356789998
No 175
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=78.74 E-value=0.66 Score=34.74 Aligned_cols=13 Identities=46% Similarity=1.119 Sum_probs=11.1
Q ss_pred eeeCCCCCccchh
Q 027446 44 MFLCPFCAEDFDI 56 (223)
Q Consensus 44 ~F~CPfC~~~~d~ 56 (223)
.|+||-|+++|--
T Consensus 51 ~FkCP~CgEEFyG 63 (95)
T 2k5c_A 51 VFKCPVCGEEFYG 63 (95)
T ss_dssp EEECTTTCCEEET
T ss_pred hhcCCCccHHHhc
Confidence 7999999998743
No 176
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=78.37 E-value=0.54 Score=32.32 Aligned_cols=47 Identities=26% Similarity=0.403 Sum_probs=27.8
Q ss_pred CCccceeeCCCCCccchhhh--hhccccccCCC---------CCCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFDIVG--LCCHIDEDHPI---------EAKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~--L~~H~~~eH~~---------e~k~~VCPVCa~~v~~ 85 (223)
++....+.||.|.+.+.... -|-|.-=..+. ......||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 14 EMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred HhCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 34556789999998754432 24442111111 1236789999988764
No 177
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=78.00 E-value=0.61 Score=34.93 Aligned_cols=20 Identities=20% Similarity=0.401 Sum_probs=16.4
Q ss_pred eeCCCCCccchhhhhhcccc
Q 027446 45 FLCPFCAEDFDIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~~d~~~L~~H~~ 64 (223)
-+||.||+.+|-.+|..-+-
T Consensus 9 ~~~PlCG~~L~W~eLIeQML 28 (95)
T 2k5c_A 9 AKCPICGSPLKWEELIEEML 28 (95)
T ss_dssp EECSSSCCEECHHHHHHHST
T ss_pred ccCCcCCCccCHHHHHHHHH
Confidence 37999999999999976554
No 178
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.91 E-value=1.4 Score=26.44 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=19.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCP 77 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRV-HSG-EKPSGPS 44 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGG-SCC-SCCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 4778888776 344566777654 433 2445565
No 179
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=77.63 E-value=0.76 Score=36.72 Aligned_cols=30 Identities=30% Similarity=0.833 Sum_probs=22.7
Q ss_pred ccceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCcc
Q 027446 41 LNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRV 83 (223)
Q Consensus 41 ~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v 83 (223)
....|.|+-|+..|+.. .....||.|...+
T Consensus 129 ~~~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 129 IKWRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCCCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred ccEEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 34579999999988754 2245999998764
No 180
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.57 E-value=0.45 Score=32.49 Aligned_cols=47 Identities=23% Similarity=0.434 Sum_probs=28.9
Q ss_pred CCccceeeCCCCCccch-hhhh--hccccccCCCC---CCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFD-IVGL--CCHIDEDHPIE---AKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d-~~~L--~~H~~~eH~~e---~k~~VCPVCa~~v~~ 85 (223)
++....+.||.|.+.+. ...| |-|.-=..+.. .....||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 10 SELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQ 62 (72)
T ss_dssp CCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCS
T ss_pred hhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCc
Confidence 45677899999998754 3333 55532111111 124579999998764
No 181
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=77.30 E-value=2 Score=28.07 Aligned_cols=42 Identities=21% Similarity=0.418 Sum_probs=27.3
Q ss_pred ceeeCCCCCccchhhh--hhccccccCCCCCCccccCCccCccc
Q 027446 43 AMFLCPFCAEDFDIVG--LCCHIDEDHPIEAKNGVCPVCAKRVG 84 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~--L~~H~~~eH~~e~k~~VCPVCa~~v~ 84 (223)
..+.||.|...|.... =|-|.-=..+.......||+|...+.
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 4678999998754432 24554334444556678999998764
No 182
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.28 E-value=1.3 Score=26.10 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=13.0
Q ss_pred eeeCCCCCcc-chhhhhhcccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~ 64 (223)
.|.|++|+.. -....|..|+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTR 33 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHT
T ss_pred CeECCCCCCccCCHHHHHHHhh
Confidence 3677777776 44555666664
No 183
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=77.08 E-value=1.2 Score=36.42 Aligned_cols=27 Identities=30% Similarity=0.789 Sum_probs=19.6
Q ss_pred cceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCc
Q 027446 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
...|.||-||.-++- + -+.+||||...
T Consensus 136 ~~~~~C~~CG~i~~~-------------~-~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYICPICGYTAVD-------------E-APEYCPVCGAP 162 (170)
T ss_dssp SCEEECTTTCCEEES-------------C-CCSBCTTTCCB
T ss_pred CCeeEeCCCCCeeCC-------------C-CCCCCCCCCCC
Confidence 468999999987651 1 23499999864
No 184
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=76.84 E-value=0.75 Score=24.28 Aligned_cols=21 Identities=29% Similarity=0.601 Sum_probs=12.5
Q ss_pred eeCCCCCccc-hhhhhhccccc
Q 027446 45 FLCPFCAEDF-DIVGLCCHIDE 65 (223)
Q Consensus 45 F~CPfC~~~~-d~~~L~~H~~~ 65 (223)
|.|+.|+..| ....|..|+..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKT 24 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHHHH
Confidence 6677777663 44556666553
No 185
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=76.61 E-value=1.5 Score=36.45 Aligned_cols=41 Identities=12% Similarity=0.129 Sum_probs=26.3
Q ss_pred CCccceeeCCCCCcc------------chhhhhhccccccCCCCCCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAED------------FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~------------~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~~ 85 (223)
.+.+..|.||.|.+- |+...+..|+... ...||+|...+..
T Consensus 101 ~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~------~~tcP~t~~~l~~ 153 (179)
T 2f42_A 101 REIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV------GHFDPVTRSPLTQ 153 (179)
T ss_dssp CCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHT------CSBCTTTCCBCCG
T ss_pred cCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhC------CCCCCCCcCCCCh
Confidence 467889999998764 3334444444331 1269999988763
No 186
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.41 E-value=1.7 Score=25.64 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=19.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCP 77 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~ 44 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQKT-HAA-KSGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGGG-GCC-CCCTTCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-cCC-CCCcCCC
Confidence 4788888876 455667777653 432 2334453
No 187
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=76.30 E-value=1.4 Score=34.59 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=28.2
Q ss_pred ccceeeCCCCCcc-chhhhhhccccccCCCCCCcc
Q 027446 41 LNAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNG 74 (223)
Q Consensus 41 ~~~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~ 74 (223)
....+.|=||.+. -+...+..||.+.|.++-..+
T Consensus 12 e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~i 46 (121)
T 1wir_A 12 GRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDSM 46 (121)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHHHSSCCCHHHH
T ss_pred CCCceeEecCCCcccCHHHHHHHHHHhcCCCHHHH
Confidence 3356999999997 589999999999999976543
No 188
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.03 E-value=0.69 Score=31.79 Aligned_cols=47 Identities=21% Similarity=0.373 Sum_probs=28.0
Q ss_pred CCccceeeCCCCCccchhhh--hhccccccCCCC---------CCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFDIVG--LCCHIDEDHPIE---------AKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~--L~~H~~~eH~~e---------~k~~VCPVCa~~v~~ 85 (223)
++....+.||.|.+.+.... -|-|.-=..+.. .....||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 14 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred HHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 45566789999998754432 234432111211 235789999988764
No 189
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.88 E-value=1.1 Score=27.07 Aligned_cols=33 Identities=15% Similarity=0.085 Sum_probs=19.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPV 78 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|.|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HSS-CCCSSCCC
T ss_pred CcCCCCCCCeeCChHHHHHHHHH-hCC-CCCCCCCC
Confidence 4778888876 445667777654 433 24455653
No 190
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=75.84 E-value=0.69 Score=31.84 Aligned_cols=44 Identities=25% Similarity=0.551 Sum_probs=26.6
Q ss_pred CCccceeeCCCCCccchhh-hh--hccccccCCC-----CCCccccCCccCc
Q 027446 39 DDLNAMFLCPFCAEDFDIV-GL--CCHIDEDHPI-----EAKNGVCPVCAKR 82 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~-~L--~~H~~~eH~~-----e~k~~VCPVCa~~ 82 (223)
++....+.||.|.+.|... .| |-|.-=..+. ......||+|...
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 10 DPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp CCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred ccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 4667789999999875443 33 3453222221 1223589999986
No 191
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=75.80 E-value=0.42 Score=32.14 Aligned_cols=46 Identities=17% Similarity=0.425 Sum_probs=25.6
Q ss_pred CccceeeCCCCCccchh----h-hhhccccccCCCC---CCccccCCccCccch
Q 027446 40 DLNAMFLCPFCAEDFDI----V-GLCCHIDEDHPIE---AKNGVCPVCAKRVGT 85 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~----~-~L~~H~~~eH~~e---~k~~VCPVCa~~v~~ 85 (223)
+......||.|.+.|.. . .-|.|.-=.++.. .++..||+|...+..
T Consensus 10 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp STTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred cCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 44556789999887642 1 2255532111111 123469999887654
No 192
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=75.68 E-value=2.1 Score=29.49 Aligned_cols=47 Identities=21% Similarity=0.416 Sum_probs=35.7
Q ss_pred ceeeCC-CCCccchhhhhhccccccCCCCCCccccCCccCccc-hhhhhhh
Q 027446 43 AMFLCP-FCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG-TDIVSHI 91 (223)
Q Consensus 43 ~~F~CP-fC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~-~d~i~Hi 91 (223)
....|| .|+..+-...|-.|+..+ -..+.+.|+-|...+. .++-.|.
T Consensus 15 ~~v~C~~~C~~~v~r~~l~~H~~~~--C~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 15 NVIPCPNRCPMKLSRRDLPAHLQHD--CPKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp SCCBCTTCCSCBCCSSSSTTTTTTS--CTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred cccCCCccccHHhhHhHHHhhCHhh--CCCcceECCCCCCccCHHHHHHHH
Confidence 456895 799999899999998743 3356789999998765 5777774
No 193
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.63 E-value=1.2 Score=26.77 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=17.7
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCP 77 (223)
.|.|++|+.. .....|..|... |.. .+.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRV-HTG-ERSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-CSS-CCSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 3677777776 345566666553 432 2344554
No 194
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=75.33 E-value=0.65 Score=29.68 Aligned_cols=39 Identities=23% Similarity=0.507 Sum_probs=21.7
Q ss_pred eeCCCCCccchh----hhh--hccccccCCC---CCCccccCCccCcc
Q 027446 45 FLCPFCAEDFDI----VGL--CCHIDEDHPI---EAKNGVCPVCAKRV 83 (223)
Q Consensus 45 F~CPfC~~~~d~----~~L--~~H~~~eH~~---e~k~~VCPVCa~~v 83 (223)
..||.|.+++.. ..| |.|.-=.++. -.++..||+|...+
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEe
Confidence 468888777544 222 5554222222 12356899998754
No 195
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.60 E-value=1.3 Score=26.45 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=19.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCP 77 (223)
.|.|+.|+.. -....|..|+.. |.. .+.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAI-HTG-KKPSGPS 44 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTT-SCC-CCCCCSC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 4778888876 455667777653 433 2445565
No 196
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.44 E-value=1.1 Score=26.99 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=17.7
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCP 77 (223)
.|.|++|+.. -....|..|+.. |.. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTG-ERHSGPS 44 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTC-CCBTTTB
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCC-CCCCCCC
Confidence 3777777776 445666666553 332 2344454
No 197
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=74.02 E-value=1.5 Score=22.73 Aligned_cols=20 Identities=25% Similarity=0.668 Sum_probs=12.7
Q ss_pred eeCCCCCccc-hhhhhhcccc
Q 027446 45 FLCPFCAEDF-DIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~~-d~~~L~~H~~ 64 (223)
|.|+.|+..| ....|..|..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred ccCCCCCCcCCCHHHHHHHHH
Confidence 6777777763 3456666654
No 198
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.76 E-value=0.7 Score=27.85 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=16.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCP 77 (223)
.|.|++|+.. -....|..|+.. |.. .+.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRL-HSR-EKSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HHH-TTCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 3677777766 344556666543 322 2344554
No 199
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.62 E-value=1.7 Score=25.26 Aligned_cols=20 Identities=30% Similarity=0.463 Sum_probs=11.9
Q ss_pred eeCCCCCcc-chhhhhhcccc
Q 027446 45 FLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~ 64 (223)
|.|+.|+.. -....|..|+.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (42)
T 2yte_A 11 YSCAECKETFSDNNRLVQHQK 31 (42)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 666666665 34455566654
No 200
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=73.19 E-value=2.2 Score=28.56 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=6.7
Q ss_pred eeCCCCCccchhhhh
Q 027446 45 FLCPFCAEDFDIVGL 59 (223)
Q Consensus 45 F~CPfC~~~~d~~~L 59 (223)
|.|=-|+..|+..+|
T Consensus 4 Y~C~rCg~~fs~~el 18 (48)
T 4ayb_P 4 YRCGKCWKTFTDEQL 18 (48)
T ss_dssp -CCCCTTTTCCCCCS
T ss_pred EEeeccCCCccHHHH
Confidence 444455554444444
No 201
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=72.99 E-value=1.1 Score=23.56 Aligned_cols=20 Identities=35% Similarity=0.615 Sum_probs=13.6
Q ss_pred eeCCCCCcc-chhhhhhcccc
Q 027446 45 FLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~ 64 (223)
|.|+.|+.. -....|..|+.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHIL 23 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHT
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 778888876 34556666665
No 202
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=72.82 E-value=1 Score=23.63 Aligned_cols=21 Identities=24% Similarity=0.453 Sum_probs=13.8
Q ss_pred eeCCCCCcc-chhhhhhccccc
Q 027446 45 FLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
|.|+.|+.. -....|..|...
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHHH
Confidence 778888876 344566666553
No 203
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=75.01 E-value=0.74 Score=24.47 Aligned_cols=22 Identities=27% Similarity=0.572 Sum_probs=15.4
Q ss_pred eeeCCCCCccc-hhhhhhccccc
Q 027446 44 MFLCPFCAEDF-DIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~~ 65 (223)
.|.|++|+..| ....|..|...
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRI 25 (30)
Confidence 37899998874 45667777653
No 204
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=72.42 E-value=1.4 Score=23.10 Aligned_cols=22 Identities=23% Similarity=0.691 Sum_probs=16.0
Q ss_pred eeeCCCCCccc-hhhhhhccccc
Q 027446 44 MFLCPFCAEDF-DIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~~ 65 (223)
.|.|+.|+..| ....|..|+..
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 47899998874 56677777653
No 205
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=72.10 E-value=1.2 Score=23.32 Aligned_cols=21 Identities=24% Similarity=0.629 Sum_probs=14.6
Q ss_pred eeeCCCCCcc-chhhhhhcccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~ 64 (223)
.|.|+.|+.. -....|..|+.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHH
Confidence 4788888887 44566666654
No 206
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=72.08 E-value=1.3 Score=23.10 Aligned_cols=21 Identities=24% Similarity=0.447 Sum_probs=13.8
Q ss_pred eeeCCCCCccc-hhhhhhcccc
Q 027446 44 MFLCPFCAEDF-DIVGLCCHID 64 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~ 64 (223)
.|.|+.|+..| ....|..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLR 23 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHH
Confidence 36788888763 4556666654
No 207
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.06 E-value=1.3 Score=24.89 Aligned_cols=22 Identities=23% Similarity=0.458 Sum_probs=16.8
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|++|+.. -....|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHHHH
Confidence 5899999998 456677777653
No 208
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=71.95 E-value=1 Score=28.02 Aligned_cols=24 Identities=25% Similarity=0.606 Sum_probs=19.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDH 67 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH 67 (223)
.|.|++|+.. .....|..|+...|
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CcCCCCCcchhCCHHHHHHHHHHhc
Confidence 4999999998 56788889987665
No 209
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.80 E-value=1 Score=25.53 Aligned_cols=21 Identities=33% Similarity=0.520 Sum_probs=16.4
Q ss_pred eeeCCCCCccchh--hhhhcccc
Q 027446 44 MFLCPFCAEDFDI--VGLCCHID 64 (223)
Q Consensus 44 ~F~CPfC~~~~d~--~~L~~H~~ 64 (223)
.|.|++|+..|.. ..|..|..
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~ 31 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIW 31 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHH
Confidence 5999999998655 57877865
No 210
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.62 E-value=1.7 Score=25.71 Aligned_cols=20 Identities=25% Similarity=0.283 Sum_probs=11.7
Q ss_pred eeCCCCCcc-chhhhhhcccc
Q 027446 45 FLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~ 64 (223)
|.|+.|+.. -....|..|..
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2yu5_A 13 FKCSKCDRVFTQRNYLVQHER 33 (44)
T ss_dssp EECSSSSCEESSSHHHHHHHH
T ss_pred eECCCCCchhCCHHHHHHHhH
Confidence 666666665 34455556654
No 211
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=71.43 E-value=1.6 Score=24.59 Aligned_cols=22 Identities=27% Similarity=0.425 Sum_probs=16.5
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. .....|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 4899999997 455677777653
No 212
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.23 E-value=1.7 Score=25.60 Aligned_cols=22 Identities=18% Similarity=0.217 Sum_probs=13.7
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. -....|..|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKT 34 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTT
T ss_pred CeeCCCCCCccCCHHHHHHHHHH
Confidence 3777777776 444566667553
No 213
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=71.14 E-value=2.3 Score=30.18 Aligned_cols=43 Identities=28% Similarity=0.553 Sum_probs=26.6
Q ss_pred cceeeCCCCCccchhh---hh---hccc-----cccCCCCCCccccCCccCccch
Q 027446 42 NAMFLCPFCAEDFDIV---GL---CCHI-----DEDHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~---~L---~~H~-----~~eH~~e~k~~VCPVCa~~v~~ 85 (223)
...+.||.|-+.++.. .+ |-|. -... .+..+..||+|...+..
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~-~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRI-RTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHH-TTSSCSBCTTTCCBCSS
T ss_pred ccCCcCCccCccCccccccccccCCCCCcCHHHHHHH-HhcCCCCCCCCCCccCC
Confidence 3467899999987543 22 4442 1111 12246789999998764
No 214
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=70.61 E-value=1.6 Score=26.97 Aligned_cols=20 Identities=25% Similarity=0.642 Sum_probs=9.3
Q ss_pred eeCCCCCcc-chhhhhhcccc
Q 027446 45 FLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~ 64 (223)
|.|+.|+.. .....|..|+.
T Consensus 8 ~~C~~C~k~F~~~~~L~~H~~ 28 (48)
T 3iuf_A 8 YACDICGKRYKNRPGLSYHYA 28 (48)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred EECCCcCcccCCHHHHHHHhh
Confidence 455555554 23344444444
No 215
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=70.54 E-value=1.7 Score=22.76 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=14.1
Q ss_pred eeeCCCCCccc-hhhhhhcccc
Q 027446 44 MFLCPFCAEDF-DIVGLCCHID 64 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~ 64 (223)
.|.|+.|+..| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 37888888873 4466666654
No 216
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=70.53 E-value=1.4 Score=24.35 Aligned_cols=22 Identities=27% Similarity=0.686 Sum_probs=16.4
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. .....|..|+..
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHHHH
Confidence 4899999987 455677778764
No 217
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.46 E-value=2.7 Score=27.91 Aligned_cols=29 Identities=24% Similarity=0.469 Sum_probs=23.9
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAK 72 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k 72 (223)
.|.|++|+.. -....|..|+...|..+..
T Consensus 38 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 38 RFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred ccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 5999999998 5678899999888886543
No 218
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=70.08 E-value=1.7 Score=35.88 Aligned_cols=28 Identities=21% Similarity=0.535 Sum_probs=19.7
Q ss_pred cceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCc
Q 027446 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
...|.|+.||--++-. + -+-+||+|...
T Consensus 153 ~~~~~C~~CG~~~~g~--------~-----~p~~CP~C~~~ 180 (191)
T 1lko_A 153 ATKWRCRNCGYVHEGT--------G-----APELCPACAHP 180 (191)
T ss_dssp EEEEEETTTCCEEEEE--------E-----CCSBCTTTCCB
T ss_pred CceEEECCCCCEeeCC--------C-----CCCCCCCCcCC
Confidence 3489999999877621 1 12299999873
No 219
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=70.05 E-value=2.4 Score=31.28 Aligned_cols=45 Identities=24% Similarity=0.435 Sum_probs=27.7
Q ss_pred CccceeeCCCCCccchhhh--hhcc-----ccccCCCCCCccccCCccCccch
Q 027446 40 DLNAMFLCPFCAEDFDIVG--LCCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~~~--L~~H-----~~~eH~~e~k~~VCPVCa~~v~~ 85 (223)
.....|.||.|...+.... -|-| |...+ .......||+|...+..
T Consensus 11 ~~~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~-~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 11 PSLSECQCGICMEILVEPVTLPCNHTLCKPCFQST-VEKASLCCPFCRRRVSS 62 (115)
T ss_dssp CCHHHHBCTTTCSBCSSCEECTTSCEECHHHHCCC-CCTTTSBCTTTCCBCHH
T ss_pred CCCCCCCCccCCcccCceeEcCCCCHHhHHHHHHH-HhHCcCCCCCCCcccCc
Confidence 4456799999998744322 2444 22222 12335789999998764
No 220
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=69.81 E-value=1.3 Score=28.51 Aligned_cols=25 Identities=24% Similarity=0.638 Sum_probs=20.5
Q ss_pred eeeCCCCCcc-chhhhhhccccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHP 68 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~ 68 (223)
.|.|++|+.. -....|..|+...|.
T Consensus 40 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 40 VYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred CeECCCCCCccCCHHHHHHHHHHHcC
Confidence 5999999998 566789899887664
No 221
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.53 E-value=1 Score=29.81 Aligned_cols=45 Identities=20% Similarity=0.628 Sum_probs=26.7
Q ss_pred CccceeeCCCCCccchhh---------hhhccccccCCCC---CCccccCCccCccc
Q 027446 40 DLNAMFLCPFCAEDFDIV---------GLCCHIDEDHPIE---AKNGVCPVCAKRVG 84 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~~---------~L~~H~~~eH~~e---~k~~VCPVCa~~v~ 84 (223)
.....+.||.|.+.+... .-|-|.-=..+.. .+...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp CTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 445578999999986643 2355532222221 12457999987654
No 222
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=69.48 E-value=1.9 Score=23.93 Aligned_cols=22 Identities=23% Similarity=0.573 Sum_probs=16.6
Q ss_pred eeeCCCCCccc-hhhhhhccccc
Q 027446 44 MFLCPFCAEDF-DIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~~ 65 (223)
.|.|++|+..| ....|..|+..
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHH
Confidence 48999999874 56777778654
No 223
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=69.38 E-value=0.8 Score=33.78 Aligned_cols=40 Identities=25% Similarity=0.467 Sum_probs=25.1
Q ss_pred eeCCCCCccchhhh------------------h--hccccccCCCC--------CCccccCCccCccc
Q 027446 45 FLCPFCAEDFDIVG------------------L--CCHIDEDHPIE--------AKNGVCPVCAKRVG 84 (223)
Q Consensus 45 F~CPfC~~~~d~~~------------------L--~~H~~~eH~~e--------~k~~VCPVCa~~v~ 84 (223)
..||.|.+.|.... + |.|+-=.++.. .+...||+|...++
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 48999988875432 2 66654333321 34568999987654
No 224
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.34 E-value=3.4 Score=23.88 Aligned_cols=20 Identities=25% Similarity=0.496 Sum_probs=11.1
Q ss_pred eeCCCCCcc-chhhhhhcccc
Q 027446 45 FLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~ 64 (223)
|.|+.|+.. -....|..|+.
T Consensus 12 ~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2ytb_A 12 YRCDQCGKAFSQKGSLIVHIR 32 (42)
T ss_dssp BCCTTTTCCBSSHHHHHTTGG
T ss_pred eeCCCccchhCCHHHHHHHHH
Confidence 566666665 33455555554
No 225
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=69.17 E-value=0.37 Score=38.22 Aligned_cols=45 Identities=27% Similarity=0.591 Sum_probs=28.4
Q ss_pred CccceeeCCCCCccchhh-hh--hccccccCCC----CCCccccCCccCccc
Q 027446 40 DLNAMFLCPFCAEDFDIV-GL--CCHIDEDHPI----EAKNGVCPVCAKRVG 84 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~~-~L--~~H~~~eH~~----e~k~~VCPVCa~~v~ 84 (223)
+....+.||.|...|... .+ |-|.-=..+. ......||+|...+.
T Consensus 50 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 50 SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred hCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 456789999999875543 33 5553322222 223578999999874
No 226
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=69.14 E-value=1.6 Score=22.72 Aligned_cols=20 Identities=30% Similarity=0.813 Sum_probs=12.2
Q ss_pred eeCCCCCccc-hhhhhhcccc
Q 027446 45 FLCPFCAEDF-DIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~~-d~~~L~~H~~ 64 (223)
|.|+.|+..| ....|..|..
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 2m0e_A 3 HKCPHCDKKFNQVGNLKAHLK 23 (29)
T ss_dssp CCCSSCCCCCCTTTHHHHHHH
T ss_pred CcCCCCCcccCCHHHHHHHHH
Confidence 6777777764 4445555654
No 227
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.11 E-value=1.1 Score=31.20 Aligned_cols=48 Identities=29% Similarity=0.567 Sum_probs=28.2
Q ss_pred CCccceeeCCCCCccchh----h-hh-hccccccCCC------CCCccccCCccCccchh
Q 027446 39 DDLNAMFLCPFCAEDFDI----V-GL-CCHIDEDHPI------EAKNGVCPVCAKRVGTD 86 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~----~-~L-~~H~~~eH~~------e~k~~VCPVCa~~v~~d 86 (223)
++....+.||.|.+.|.. . .| |-|.-=..+. ......||+|...+..+
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 10 DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp CCCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred hhccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 345567899999998665 2 11 3342211111 12357899999987654
No 228
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=68.91 E-value=3.5 Score=34.24 Aligned_cols=47 Identities=13% Similarity=0.051 Sum_probs=26.0
Q ss_pred CCccceeeCCCCCccchhhhh--hccccccCCCC----CCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFDIVGL--CCHIDEDHPIE----AKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~L--~~H~~~eH~~e----~k~~VCPVCa~~v~~ 85 (223)
.+.+..|.||.|.+-+..... |-|.-...+.+ .....||+|...+..
T Consensus 203 ~~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 203 RDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp CCCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred CCCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 467789999999875332222 22222211111 112349999998763
No 229
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=71.72 E-value=1 Score=23.93 Aligned_cols=20 Identities=25% Similarity=0.675 Sum_probs=13.9
Q ss_pred eeCCCCCccc-hhhhhhcccc
Q 027446 45 FLCPFCAEDF-DIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~~-d~~~L~~H~~ 64 (223)
|.|+.|+..| ....|..|+.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 7788888874 4566667765
No 230
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=71.47 E-value=1 Score=23.39 Aligned_cols=20 Identities=30% Similarity=0.735 Sum_probs=13.8
Q ss_pred eeCCCCCccc-hhhhhhcccc
Q 027446 45 FLCPFCAEDF-DIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~~-d~~~L~~H~~ 64 (223)
|.|+.|+..| ....|..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHIR 23 (26)
Confidence 7888888874 4466666654
No 231
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=68.28 E-value=1.6 Score=23.12 Aligned_cols=21 Identities=19% Similarity=0.709 Sum_probs=14.6
Q ss_pred eeeCCCCCccc-hhhhhhcccc
Q 027446 44 MFLCPFCAEDF-DIVGLCCHID 64 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~ 64 (223)
.|.|+.|+..| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHH
Confidence 37888888874 4566777754
No 232
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=68.25 E-value=1.6 Score=37.01 Aligned_cols=40 Identities=18% Similarity=0.429 Sum_probs=28.4
Q ss_pred cceeeCCCCCccchhhhhhccccccCC-CCCCccccCCccCccc
Q 027446 42 NAMFLCPFCAEDFDIVGLCCHIDEDHP-IEAKNGVCPVCAKRVG 84 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L~~H~~~eH~-~e~k~~VCPVCa~~v~ 84 (223)
+-+|.||.|+.++...++.. .... ..+.-..||-|...+.
T Consensus 20 ~l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~~ 60 (206)
T 3flo_B 20 TLELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLFT 60 (206)
T ss_dssp CEEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBCC
T ss_pred eeEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcCC
Confidence 55899999999877777753 1111 3445678999999876
No 233
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=67.93 E-value=0.8 Score=35.12 Aligned_cols=54 Identities=20% Similarity=0.367 Sum_probs=35.3
Q ss_pred eeCCCCCccchhhhhhccccccCCCCCCccccCCccCccc-------hhhhhhhhhcccchhhhc
Q 027446 45 FLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG-------TDIVSHITMQHGNFFKIQ 102 (223)
Q Consensus 45 F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~-------~d~i~Hi~~qH~~~fk~~ 102 (223)
-.||-|..+++..+=.-||+.=+..=.+.+.||-|...+- .|+. =||++-+|++
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYF----C~~chgLiSK 93 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYF----CQHGHGLISK 93 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEE----ETTTTEEECT
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhcCcchh----hccCCceeec
Confidence 5899999887665544444433333345678999999863 3554 4677877754
No 234
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.91 E-value=1.7 Score=24.44 Aligned_cols=22 Identities=23% Similarity=0.505 Sum_probs=16.8
Q ss_pred eeeCCCCCccc-hhhhhhccccc
Q 027446 44 MFLCPFCAEDF-DIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~~ 65 (223)
.|.|+.|+..| ....|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHH
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 58999999984 56777778653
No 235
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.48 E-value=3.5 Score=23.81 Aligned_cols=22 Identities=18% Similarity=0.304 Sum_probs=14.2
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. -....|..|+..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~ 32 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHERI 32 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGGG
T ss_pred CeECCCCCCCcCCHHHHHHHHHH
Confidence 4777777776 345566667653
No 236
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.17 E-value=1.8 Score=24.80 Aligned_cols=25 Identities=20% Similarity=0.445 Sum_probs=17.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHP 68 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~ 68 (223)
.|.|+.|+.. -....|..|+...|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 5899999998 456778888333453
No 237
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=67.11 E-value=2.2 Score=37.71 Aligned_cols=44 Identities=18% Similarity=0.388 Sum_probs=28.0
Q ss_pred ccceeeCCCCCccchhhh---hhcccccc-----CCCCCCccccCC--ccCccc
Q 027446 41 LNAMFLCPFCAEDFDIVG---LCCHIDED-----HPIEAKNGVCPV--CAKRVG 84 (223)
Q Consensus 41 ~~~~F~CPfC~~~~d~~~---L~~H~~~e-----H~~e~k~~VCPV--Ca~~v~ 84 (223)
....|.||.|...|.... -|-|.-+. +-.......||| |...+.
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred CceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 467899999998744333 35554332 222234578999 999765
No 238
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.37 E-value=2.4 Score=25.09 Aligned_cols=22 Identities=18% Similarity=0.025 Sum_probs=13.2
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. -....|..|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQAL 34 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 3677777776 344556666553
No 239
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=66.21 E-value=0.92 Score=34.18 Aligned_cols=44 Identities=25% Similarity=0.408 Sum_probs=26.5
Q ss_pred ccceeeCCCCCccchhhh--hhccc-----cccCCCCCCccccCCccCccch
Q 027446 41 LNAMFLCPFCAEDFDIVG--LCCHI-----DEDHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 41 ~~~~F~CPfC~~~~d~~~--L~~H~-----~~eH~~e~k~~VCPVCa~~v~~ 85 (223)
....+.||.|...|.... -|-|. -..+- ..+...||+|...+..
T Consensus 49 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 49 VEETFQCICCQELVFRPITTVCQHNVCKDCLDRSF-RAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHH-HTTCCBCTTTCCBCCT
T ss_pred CccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHH-hHCcCCCCCCCccCCC
Confidence 345789999998754332 23342 22211 2345589999988764
No 240
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=66.17 E-value=2.7 Score=32.07 Aligned_cols=30 Identities=27% Similarity=0.489 Sum_probs=23.4
Q ss_pred CccceeeCCCCCccchhhhhhccccccCCCCCCcc-ccCCccCc
Q 027446 40 DLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNG-VCPVCAKR 82 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~-VCPVCa~~ 82 (223)
+.+..|.|+-|+..|... .... .||.|...
T Consensus 69 ~~p~~~~C~~CG~~~e~~-------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 69 DEKVELECKDCSHVFKPN-------------ALDYGVCEKCHSK 99 (119)
T ss_dssp EECCEEECSSSSCEECSC-------------CSTTCCCSSSSSC
T ss_pred eccceEEcCCCCCEEeCC-------------CCCCCcCccccCC
Confidence 567799999999988762 2246 89999876
No 241
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.94 E-value=2 Score=23.93 Aligned_cols=22 Identities=23% Similarity=0.462 Sum_probs=16.4
Q ss_pred eeeCCCCCccc-hhhhhhccccc
Q 027446 44 MFLCPFCAEDF-DIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~~ 65 (223)
.|.|++|+..| ....|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRK 31 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHH
Confidence 58999999984 45667778653
No 242
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.81 E-value=1.9 Score=32.02 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=29.1
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
.|.|+.|+.. -....|..|+...|..+ ++-.|.+|...
T Consensus 50 pf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~~ 88 (102)
T 2ghf_A 50 SYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKRN 88 (102)
T ss_dssp CEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCCS
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccCC
Confidence 5999999998 56778999954567654 67899986653
No 243
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.55 E-value=2.2 Score=28.87 Aligned_cols=45 Identities=33% Similarity=0.564 Sum_probs=25.0
Q ss_pred CccceeeCCCCCccchhhh-----hhccccccCCCC---CCccccCCccCccc
Q 027446 40 DLNAMFLCPFCAEDFDIVG-----LCCHIDEDHPIE---AKNGVCPVCAKRVG 84 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~~~-----L~~H~~~eH~~e---~k~~VCPVCa~~v~ 84 (223)
+......||.|.+.|.... -|.|.-=.++.. .+...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 63 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCS
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccc
Confidence 3445668999998764321 255542111111 12348999988764
No 244
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.88 E-value=1.2 Score=30.40 Aligned_cols=42 Identities=31% Similarity=0.648 Sum_probs=25.7
Q ss_pred ceeeCCCCCccchhh----hh-hccccccCCCCC---CccccCCccCccc
Q 027446 43 AMFLCPFCAEDFDIV----GL-CCHIDEDHPIEA---KNGVCPVCAKRVG 84 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~----~L-~~H~~~eH~~e~---k~~VCPVCa~~v~ 84 (223)
....||.|.++|... .| |.|.-=.++... ++..||+|...+.
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 356899999876543 22 666543333221 3458999988764
No 245
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.54 E-value=1.4 Score=24.94 Aligned_cols=22 Identities=23% Similarity=0.519 Sum_probs=16.6
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|++|+.. .....|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHH
Confidence 4899999987 455677778664
No 246
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=64.38 E-value=1.7 Score=31.98 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=22.4
Q ss_pred CccceeeCCCCCcc--chhhhhhccccccCCCCCCccccCCccCccc
Q 027446 40 DLNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (223)
Q Consensus 40 d~~~~F~CPfC~~~--~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~ 84 (223)
.+...|+||||+.+ ++... ....||-|-..+.
T Consensus 23 ~q~~~y~Cp~CG~~~v~r~at-------------GiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 23 EMNEDHACPNCGEDRVDRQGT-------------GIWQCSYCDYKFT 56 (83)
T ss_dssp HHHSCEECSSSCCEEEEEEET-------------TEEEETTTCCEEE
T ss_pred hccccCcCCCCCCcceeccCC-------------CeEECCCCCCEec
Confidence 34568999999986 44432 2467999988743
No 247
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=64.10 E-value=3.4 Score=34.54 Aligned_cols=27 Identities=30% Similarity=0.872 Sum_probs=20.1
Q ss_pred cceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCc
Q 027446 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
...|.|+.||--++ + + .+-+||||...
T Consensus 169 ~~~~~C~~CG~i~~--g-------~-----~p~~CP~C~~~ 195 (202)
T 1yuz_A 169 DKFHLCPICGYIHK--G-------E-----DFEKCPICFRP 195 (202)
T ss_dssp CCEEECSSSCCEEE--S-------S-----CCSBCTTTCCB
T ss_pred CcEEEECCCCCEEc--C-------c-----CCCCCCCCCCC
Confidence 36899999998776 2 1 13699999864
No 248
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=63.88 E-value=2.8 Score=26.71 Aligned_cols=23 Identities=17% Similarity=0.338 Sum_probs=18.1
Q ss_pred cceeeCCCCCccchhhhhhcccc
Q 027446 42 NAMFLCPFCAEDFDIVGLCCHID 64 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L~~H~~ 64 (223)
...|.||-|++.|.+....+|.+
T Consensus 7 ~~~~~C~~C~~~i~~~~~~EH~D 29 (39)
T 2i5o_A 7 EDQVPCEKCGSLVPVWDMPEHMD 29 (39)
T ss_dssp CCEEECTTTCCEEEGGGHHHHHH
T ss_pred CCCcccccccCcCCcccccchhh
Confidence 34688999999888877777765
No 249
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.18 E-value=1.7 Score=25.97 Aligned_cols=20 Identities=25% Similarity=0.403 Sum_probs=10.4
Q ss_pred eeCCCCCcc-chhhhhhcccc
Q 027446 45 FLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~ 64 (223)
|.|++|+.. .....|..|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2en3_A 13 FQCKECGMNFSWSCSLFKHLR 33 (46)
T ss_dssp EECSSSCCEESSSHHHHHHHH
T ss_pred eeCcccChhhCCHHHHHHHHH
Confidence 566666655 33444555543
No 250
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=63.11 E-value=2.7 Score=23.20 Aligned_cols=23 Identities=30% Similarity=0.573 Sum_probs=15.8
Q ss_pred eeCCCCCcc-chhhhhhccccccCC
Q 027446 45 FLCPFCAED-FDIVGLCCHIDEDHP 68 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~~eH~ 68 (223)
|.|+.|+.. -....|..|... |.
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~~-H~ 26 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIKT-AF 26 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTTS-SS
T ss_pred CCCCCCCcccCCHHHHHHHHHH-Hc
Confidence 788888887 445667777653 44
No 251
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=62.78 E-value=3.9 Score=27.42 Aligned_cols=14 Identities=36% Similarity=0.918 Sum_probs=10.4
Q ss_pred CccceeeCCCCCcc
Q 027446 40 DLNAMFLCPFCAED 53 (223)
Q Consensus 40 d~~~~F~CPfC~~~ 53 (223)
|++..+.||.|+..
T Consensus 32 ~lP~dw~CP~Cg~~ 45 (52)
T 1e8j_A 32 DLPDDWACPVCGAS 45 (52)
T ss_dssp SSCTTCCCSSSCCC
T ss_pred HCCCCCcCCCCCCc
Confidence 56777888888863
No 252
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.62 E-value=2.2 Score=27.88 Aligned_cols=26 Identities=27% Similarity=0.432 Sum_probs=21.2
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPI 69 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~ 69 (223)
.|.|++|+.. .....|..|+...|.-
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 4999999998 5678899998876653
No 253
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=62.22 E-value=1.7 Score=31.47 Aligned_cols=15 Identities=20% Similarity=0.521 Sum_probs=12.7
Q ss_pred CCccceeeCCCCCcc
Q 027446 39 DDLNAMFLCPFCAED 53 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~ 53 (223)
..+...|.||||+.+
T Consensus 22 ~~q~~ky~C~fCgk~ 36 (73)
T 1ffk_W 22 IKHKKKYKCPVCGFP 36 (73)
T ss_pred HhcccCccCCCCCCc
Confidence 467889999999985
No 254
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=62.19 E-value=5.3 Score=29.33 Aligned_cols=41 Identities=20% Similarity=0.295 Sum_probs=23.1
Q ss_pred cceeeCCCCCccchhhhh--hccccccCCCCCCc--cccCCccCc
Q 027446 42 NAMFLCPFCAEDFDIVGL--CCHIDEDHPIEAKN--GVCPVCAKR 82 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L--~~H~~~eH~~e~k~--~VCPVCa~~ 82 (223)
...|.|+.|+--+|...= ..=+.---+++.-. -+||||.+.
T Consensus 25 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp CCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred cceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 358999999977775321 00111112233223 389999883
No 255
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.02 E-value=2.7 Score=23.34 Aligned_cols=22 Identities=27% Similarity=0.437 Sum_probs=16.4
Q ss_pred eeeCCCCCccc-hhhhhhccccc
Q 027446 44 MFLCPFCAEDF-DIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~~ 65 (223)
.|.|+.|+..| ....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKLL 31 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeecCcCCCCcCchHHHHHHHHH
Confidence 58999999985 45677777653
No 256
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=62.02 E-value=2.1 Score=26.74 Aligned_cols=25 Identities=32% Similarity=0.594 Sum_probs=21.6
Q ss_pred eeCCCCCcc-chhhhhhccccccCCC
Q 027446 45 FLCPFCAED-FDIVGLCCHIDEDHPI 69 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~~eH~~ 69 (223)
--|-||-+. -|+.-|..|+.+.|..
T Consensus 10 qhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 369999986 8999999999998864
No 257
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=61.92 E-value=2.8 Score=33.08 Aligned_cols=49 Identities=14% Similarity=0.183 Sum_probs=31.5
Q ss_pred CCCCCCC-CCccceeeCCCCCcc--chhhhhhccccccCCCCCCccccCCccCccchhhhhh
Q 027446 32 YDETDGD-DDLNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSH 90 (223)
Q Consensus 32 ~~~~~~d-~d~~~~F~CPfC~~~--~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~~d~i~H 90 (223)
+++++.. ++..-.+.|| ||.. +....|-. ...+.|+-|+..+-.-+..|
T Consensus 99 ~~~m~~~e~~~~f~~~Cr-CG~~f~i~~~~l~~---------~~~v~C~sCSl~~~v~~~~~ 150 (155)
T 2l6l_A 99 LEEMSWNEGDHSFYLSCR-CGGKYSVSKDEAEE---------VSLISCDTCSLIIELLHYNH 150 (155)
T ss_dssp TTTSEEETTTTEEEEECS-SSCEEEEETTHHHH---------CCEEECSSSSCEEEEECCCC
T ss_pred HHHhccccCCcEEEEcCC-CCCeEEecHHHhCC---------CCEEECCCCceEEEEEEccc
Confidence 3444432 2334579999 9975 44444422 15688999999987767766
No 258
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.65 E-value=3.2 Score=23.18 Aligned_cols=22 Identities=14% Similarity=0.316 Sum_probs=16.5
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. .....|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 5899999997 455667778653
No 259
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=61.51 E-value=2 Score=30.97 Aligned_cols=14 Identities=29% Similarity=0.831 Sum_probs=11.7
Q ss_pred CccceeeCCCCCcc
Q 027446 40 DLNAMFLCPFCAED 53 (223)
Q Consensus 40 d~~~~F~CPfC~~~ 53 (223)
.+...|.||||+..
T Consensus 22 ~q~~ky~C~fCgk~ 35 (72)
T 3jyw_9 22 QQHARYDCSFCGKK 35 (72)
T ss_dssp HHHSCBCCSSCCSS
T ss_pred HhccCccCCCCCCc
Confidence 45678999999986
No 260
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=61.38 E-value=2.4 Score=31.61 Aligned_cols=44 Identities=27% Similarity=0.472 Sum_probs=27.6
Q ss_pred ccceeeCCCCCccc-hhhhh--hccccccCCCCCCc-cccCCccCccc
Q 027446 41 LNAMFLCPFCAEDF-DIVGL--CCHIDEDHPIEAKN-GVCPVCAKRVG 84 (223)
Q Consensus 41 ~~~~F~CPfC~~~~-d~~~L--~~H~~~eH~~e~k~-~VCPVCa~~v~ 84 (223)
....+.||.|...| +-..| |-|.-=..+..... ..||+|...+.
T Consensus 19 l~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 19 LEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp HHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred chhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCc
Confidence 34578999999874 44444 55644333332211 57999998865
No 261
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=60.94 E-value=2.7 Score=23.51 Aligned_cols=20 Identities=35% Similarity=0.670 Sum_probs=11.3
Q ss_pred eeCCCCCcc-chhhhhhcccc
Q 027446 45 FLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~ 64 (223)
|.|+.|+.. -....|..|+.
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~ 23 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHIT 23 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 566666665 34455555544
No 262
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=60.44 E-value=2.8 Score=35.69 Aligned_cols=26 Identities=27% Similarity=0.480 Sum_probs=23.1
Q ss_pred CccceeeCCCCCccchhhhhhccccc
Q 027446 40 DLNAMFLCPFCAEDFDIVGLCCHIDE 65 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~~~L~~H~~~ 65 (223)
=.|+-|+|-.|++.+|+..|..|+..
T Consensus 150 vFWQFYKCe~CgKYvDId~~~~Hlk~ 175 (226)
T 2czr_A 150 IFWQFYKCEECGKYVDIENLEAHLRE 175 (226)
T ss_dssp EEEEEEECTTTCCEEEGGGHHHHHHT
T ss_pred EEEEEEehhhcCceecHHHHHHHHHH
Confidence 36899999999999999999999874
No 263
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=60.22 E-value=2.2 Score=31.64 Aligned_cols=15 Identities=20% Similarity=0.720 Sum_probs=12.2
Q ss_pred CCccceeeCCCCCcc
Q 027446 39 DDLNAMFLCPFCAED 53 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~ 53 (223)
..+...|.||||+..
T Consensus 30 ~~q~~ky~CpfCGk~ 44 (83)
T 3j21_i 30 AKMRQKHTCPVCGRK 44 (83)
T ss_dssp HHHHSCBCCSSSCSS
T ss_pred HHhhcccCCCCCCCc
Confidence 345678999999986
No 264
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=60.06 E-value=3.3 Score=23.71 Aligned_cols=22 Identities=23% Similarity=0.604 Sum_probs=16.6
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. .....|..|+..
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~ 28 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNV 28 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHT
T ss_pred ceECCCCCcccCCHHHHHHHHHH
Confidence 4899999987 456677788764
No 265
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.18 E-value=3.8 Score=24.18 Aligned_cols=22 Identities=18% Similarity=0.208 Sum_probs=17.5
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. .....|..|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERT 34 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG
T ss_pred CeECCCCCcccCchHHHHHHHhH
Confidence 5899999998 456788888764
No 266
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=59.09 E-value=3.8 Score=29.32 Aligned_cols=29 Identities=17% Similarity=0.430 Sum_probs=20.4
Q ss_pred ccccCCccCcc-----chhhhhhhhhcccchhhh
Q 027446 73 NGVCPVCAKRV-----GTDIVSHITMQHGNFFKI 101 (223)
Q Consensus 73 ~~VCPVCa~~v-----~~d~i~Hi~~qH~~~fk~ 101 (223)
.++|.+|-..+ +.+|.+||...|...|+.
T Consensus 29 ~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~~ 62 (73)
T 2ct5_A 29 KIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCE 62 (73)
T ss_dssp CCEETTTTEECCCCSSTHHHHHHHHHSCHHHHHH
T ss_pred EEECCCCCccccCCCChHhHHHHHHHHCHHHHHH
Confidence 45566665544 259999999999887763
No 267
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=57.96 E-value=4.7 Score=23.19 Aligned_cols=20 Identities=25% Similarity=0.531 Sum_probs=11.4
Q ss_pred eeCCCCCcc-chhhhhhcccc
Q 027446 45 FLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~-~d~~~L~~H~~ 64 (223)
|.|+.|+.. -....|..|..
T Consensus 12 ~~C~~C~k~f~~~~~l~~H~~ 32 (42)
T 2epc_A 12 YLCGQCGKSFTQRGSLAVHQR 32 (42)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHhh
Confidence 666666665 34455555554
No 268
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=57.95 E-value=2.6 Score=31.80 Aligned_cols=14 Identities=21% Similarity=0.800 Sum_probs=11.8
Q ss_pred CccceeeCCCCCcc
Q 027446 40 DLNAMFLCPFCAED 53 (223)
Q Consensus 40 d~~~~F~CPfC~~~ 53 (223)
.+...|.||||+..
T Consensus 32 ~q~~ky~CpfCgk~ 45 (92)
T 3iz5_m 32 SQHSKYFCEFCGKF 45 (92)
T ss_dssp HHHSCBCCTTTCSS
T ss_pred HHhccccCcccCCC
Confidence 45678999999986
No 269
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=57.77 E-value=4.3 Score=32.05 Aligned_cols=43 Identities=19% Similarity=0.451 Sum_probs=25.6
Q ss_pred CccceeeCCCCCccchhhhhhcccc---ccC--C---CCCCccccCCccCc
Q 027446 40 DLNAMFLCPFCAEDFDIVGLCCHID---EDH--P---IEAKNGVCPVCAKR 82 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~~~L~~H~~---~eH--~---~e~k~~VCPVCa~~ 82 (223)
+.+..+.|+-||..+....-..-++ .+. - .-.....||.|...
T Consensus 66 ~~p~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~ 116 (139)
T 3a43_A 66 EEEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSH 116 (139)
T ss_dssp EECCEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCC
T ss_pred ecCCcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCC
Confidence 5678999999999877655211111 110 0 00114689999875
No 270
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=57.58 E-value=2.7 Score=32.31 Aligned_cols=31 Identities=29% Similarity=0.738 Sum_probs=20.9
Q ss_pred CccceeeCCCCCcc-chhhhhhccccccCCCCCCccc--cCCccCccc
Q 027446 40 DLNAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGV--CPVCAKRVG 84 (223)
Q Consensus 40 d~~~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~V--CPVCa~~v~ 84 (223)
.+...|.||||+.. +...+ .+| |.-|-..+.
T Consensus 32 ~q~aky~CpfCgk~~vKR~a--------------~GIW~C~kCg~~~A 65 (103)
T 4a17_Y 32 TQHAKYGCPFCGKVAVKRAA--------------VGIWKCKPCKKIIA 65 (103)
T ss_dssp HHHSCEECTTTCCEEEEEEE--------------TTEEEETTTTEEEE
T ss_pred HhhcCCCCCCCCCceeeecC--------------cceEEcCCCCCEEe
Confidence 45678999999986 43321 233 888877753
No 271
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=57.21 E-value=6 Score=26.13 Aligned_cols=25 Identities=20% Similarity=0.290 Sum_probs=20.0
Q ss_pred eeeCCCCCcc-chhhhhhccccccCCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHPI 69 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~~ 69 (223)
.|.|++|+.. .....|..|+.. |..
T Consensus 46 ~~~C~~C~~~f~~~~~L~~H~~~-H~~ 71 (77)
T 2cot_A 46 PYKCDECGKAFIQRSHLIGHHRV-HTG 71 (77)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-SCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC
Confidence 5999999998 567889999875 543
No 272
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=57.17 E-value=2.5 Score=31.85 Aligned_cols=14 Identities=29% Similarity=0.831 Sum_probs=11.7
Q ss_pred CccceeeCCCCCcc
Q 027446 40 DLNAMFLCPFCAED 53 (223)
Q Consensus 40 d~~~~F~CPfC~~~ 53 (223)
.+...|.||||+..
T Consensus 32 ~q~~ky~CpfCgk~ 45 (92)
T 3izc_m 32 QQHARYDCSFCGKK 45 (92)
T ss_dssp HHHSCCCCSSSCSS
T ss_pred HHhcCCcCCCCCCc
Confidence 45678999999986
No 273
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=57.06 E-value=1.2 Score=28.98 Aligned_cols=42 Identities=24% Similarity=0.719 Sum_probs=25.6
Q ss_pred eeeCCCCCccchhh---------hhhccccccCCCC---CCccccCCccCccch
Q 027446 44 MFLCPFCAEDFDIV---------GLCCHIDEDHPIE---AKNGVCPVCAKRVGT 85 (223)
Q Consensus 44 ~F~CPfC~~~~d~~---------~L~~H~~~eH~~e---~k~~VCPVCa~~v~~ 85 (223)
.+.||.|.+.+... .-|-|.-=..+.. .++..||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 46899999986643 2355542211211 124589999988765
No 274
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=56.99 E-value=4.3 Score=36.73 Aligned_cols=34 Identities=21% Similarity=0.521 Sum_probs=23.9
Q ss_pred ceeeCCCCCccchhhhhhccccccCCCCCCccccCCccC-ccchhhhh
Q 027446 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAK-RVGTDIVS 89 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~-~v~~d~i~ 89 (223)
+...||||+..+... -+.-+||||-- .||.+.+|
T Consensus 277 ~~v~Cp~cgA~y~~~-------------~kG~lC~vC~l~~IG~~~~G 311 (320)
T 3mkr_B 277 PVEKCPLSGACYSPE-------------FKGQICKVTTVTEIGKDVIG 311 (320)
T ss_dssp CCEECTTTCCEECGG-------------GTTSBCTTTSSBBSSCCCCC
T ss_pred CCccCCCCCCeechh-------------hCCCCCCCCcCcccCCcccC
Confidence 456999999865321 23569999987 57877665
No 275
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=56.92 E-value=4.7 Score=36.56 Aligned_cols=35 Identities=11% Similarity=0.246 Sum_probs=23.5
Q ss_pred cceeeCCCCCccchhhhhhccccccCCCCCCccccCCccC-ccchhhhh
Q 027446 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAK-RVGTDIVS 89 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~-~v~~d~i~ 89 (223)
.+...||||+..+... -+.-+||||-- .||.+.+|
T Consensus 285 ~~~v~Cp~cgA~y~~~-------------~kG~lC~vC~l~~IG~~a~G 320 (325)
T 3mv2_A 285 TPSVSDPLTGSKYVIT-------------EKDKIDRIAMISKIGAPASG 320 (325)
T ss_dssp SCEEECTTTCCEEEGG-------------GTTSBCSSSSCBBTTCCCCC
T ss_pred CCCccCCCCCCeechh-------------hCCCCCCCCcCcccCCCccc
Confidence 3467999999865321 23569999976 47765543
No 276
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=56.68 E-value=1 Score=35.73 Aligned_cols=45 Identities=27% Similarity=0.498 Sum_probs=26.9
Q ss_pred ccceeeCCCCCccchhhh--hhcc-----ccccCCCCCCccccCCccCccchh
Q 027446 41 LNAMFLCPFCAEDFDIVG--LCCH-----IDEDHPIEAKNGVCPVCAKRVGTD 86 (223)
Q Consensus 41 ~~~~F~CPfC~~~~d~~~--L~~H-----~~~eH~~e~k~~VCPVCa~~v~~d 86 (223)
....+.||.|.+.|.... -|-| |...+- ......||+|...++.+
T Consensus 75 l~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 75 LEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSF-KAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHH-HTTCCBCTTTCCBCCTT
T ss_pred CccCCEeecCChhhcCCEEcCCCCchhHHHHHHHH-HhCCCcCCCCCccCCCC
Confidence 346789999998744332 2334 222211 22345899999987754
No 277
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.57 E-value=3.2 Score=28.47 Aligned_cols=42 Identities=26% Similarity=0.424 Sum_probs=25.3
Q ss_pred ceeeCCCCCcc-chhhhh-hccc-cccCCCCCCccccCCccCccch
Q 027446 43 AMFLCPFCAED-FDIVGL-CCHI-DEDHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 43 ~~F~CPfC~~~-~d~~~L-~~H~-~~eH~~e~k~~VCPVCa~~v~~ 85 (223)
....|+.|.+. -+...| |-|. -=..+.. +...||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK-YFQQCPMCRQFVQE 58 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHH-HCSSCTTTCCCCCC
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHh-cCCCCCCCCcchhc
Confidence 35689999886 555443 4454 2122222 23589999987764
No 278
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.42 E-value=4.5 Score=23.46 Aligned_cols=24 Identities=21% Similarity=0.481 Sum_probs=18.2
Q ss_pred eeeCCCCCcc-chhhhhhccccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHP 68 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~ 68 (223)
.|.|+.|+.. -....|..|+.. |.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 35 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLRI-HT 35 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTTT-TS
T ss_pred CEECCCCCCccCCHHHHHHHHHh-cC
Confidence 5899999998 456778888764 44
No 279
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.09 E-value=4.3 Score=23.45 Aligned_cols=22 Identities=18% Similarity=0.434 Sum_probs=17.5
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. .....|..|+..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVLI 33 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTHH
T ss_pred CEeCCCcChhhCCHHHHHHHHHH
Confidence 5999999998 566778888763
No 280
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=55.81 E-value=1.8 Score=33.30 Aligned_cols=42 Identities=31% Similarity=0.613 Sum_probs=24.5
Q ss_pred ceeeCCCCCccc-hhhhh-hccccccCCC---CCCccccCCccCccc
Q 027446 43 AMFLCPFCAEDF-DIVGL-CCHIDEDHPI---EAKNGVCPVCAKRVG 84 (223)
Q Consensus 43 ~~F~CPfC~~~~-d~~~L-~~H~~~eH~~---e~k~~VCPVCa~~v~ 84 (223)
..+.||.|.+.+ +.+.| |-|.-=..+. -.+...||+|...+.
T Consensus 52 ~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 52 NELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIK 98 (138)
T ss_dssp HHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCC
T ss_pred ccCCCcccCcccCCceECCCCCCccHHHHHHHHHcCCcCCCCCCcCC
Confidence 457899999874 43333 4443221121 123457999998764
No 281
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=55.66 E-value=1.7 Score=31.13 Aligned_cols=43 Identities=26% Similarity=0.586 Sum_probs=25.0
Q ss_pred cceeeCCCCCccchh----h-hhhccccccCCCC---CCccccCCccCccc
Q 027446 42 NAMFLCPFCAEDFDI----V-GLCCHIDEDHPIE---AKNGVCPVCAKRVG 84 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~----~-~L~~H~~~eH~~e---~k~~VCPVCa~~v~ 84 (223)
.....||.|.++|.. . --|.|.-=.++.. .++..||+|...+.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 346789999887543 1 1255542222221 23458999988754
No 282
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=54.55 E-value=5.9 Score=26.80 Aligned_cols=13 Identities=23% Similarity=0.560 Sum_probs=7.1
Q ss_pred eeeCCCCCccchh
Q 027446 44 MFLCPFCAEDFDI 56 (223)
Q Consensus 44 ~F~CPfC~~~~d~ 56 (223)
.|.|+.|+--+|.
T Consensus 3 ~y~C~~CGyvYd~ 15 (55)
T 2v3b_B 3 KWQCVVCGFIYDE 15 (55)
T ss_dssp EEEETTTCCEEET
T ss_pred cEEeCCCCeEECC
Confidence 4566666654443
No 283
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=54.54 E-value=3.1 Score=32.58 Aligned_cols=33 Identities=30% Similarity=0.603 Sum_probs=22.3
Q ss_pred CccceeeCCCCCcc-chhhhhhccccccCCCCCCccccCCccCccc
Q 027446 40 DLNAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (223)
Q Consensus 40 d~~~~F~CPfC~~~-~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~ 84 (223)
.+...|.||||+.+ +--.+- .--.|+-|-..+.
T Consensus 56 ~q~akytCPfCGk~~vKR~av------------GIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 56 EMNEDHACPNCGEDRVDRQGT------------GIWQCSYCDYKFT 89 (116)
T ss_dssp HHHSCEECSSSCCEEEEEEET------------TEEEETTTCCEEE
T ss_pred HhccCCcCCCCCCceeEecCc------------eeEECCCCCCEEE
Confidence 46778999999985 433221 2335999988854
No 284
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=53.74 E-value=6.9 Score=26.76 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=23.4
Q ss_pred ceeeCCCCCccchhhhhhccccccCCCCCCccccC
Q 027446 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCP 77 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCP 77 (223)
....|+||+..+-...|-.|... -....+.||
T Consensus 43 r~v~C~~C~~~~~~~~l~~H~~~---Cp~~~v~C~ 74 (76)
T 2yuc_A 43 RRLKCEFCGCDFSGEAYESHEGM---CPQESSGPS 74 (76)
T ss_dssp SCCCCSSSCCCCCHHHHHHTTTS---CTTSSCCCS
T ss_pred cceECCCCCCccCHHHHHHHHhH---CCCCccCCC
Confidence 46899999999999999999742 223345565
No 285
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=53.28 E-value=3.9 Score=29.65 Aligned_cols=20 Identities=35% Similarity=0.883 Sum_probs=15.2
Q ss_pred eeCCCCCccchhhhhhcccc
Q 027446 45 FLCPFCAEDFDIVGLCCHID 64 (223)
Q Consensus 45 F~CPfC~~~~d~~~L~~H~~ 64 (223)
--||||.-.+...+|..|+-
T Consensus 31 NiCPYC~nRls~eGl~RHV~ 50 (77)
T 2l7x_A 31 NICPYCASRLTSDGLARHVT 50 (77)
T ss_dssp TCCTTTCCCCCTTTHHHHHT
T ss_pred ccChhhhccCCccchhhhcc
Confidence 36888888788888887753
No 286
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=53.23 E-value=3.5 Score=26.64 Aligned_cols=35 Identities=26% Similarity=0.572 Sum_probs=23.9
Q ss_pred eeeCCCCCc-cchhhhhhccccccCCCCCCccccCCccCccchhhhh
Q 027446 44 MFLCPFCAE-DFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGTDIVS 89 (223)
Q Consensus 44 ~F~CPfC~~-~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~~d~i~ 89 (223)
.++||.|+. ++.. + .+....||+.|-.-+..+.|.
T Consensus 5 ~~~CP~C~~~~l~~---------d--~~~gelvC~~CG~v~~e~~id 40 (50)
T 1pft_A 5 QKVCPACESAELIY---------D--PERGEIVCAKCGYVIEENIID 40 (50)
T ss_dssp CCSCTTTSCCCEEE---------E--TTTTEEEESSSCCBCCCCCCC
T ss_pred cEeCcCCCCcceEE---------c--CCCCeEECcccCCcccccccc
Confidence 578999987 3211 1 235568999998877766654
No 287
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=53.14 E-value=4.4 Score=26.58 Aligned_cols=28 Identities=14% Similarity=0.420 Sum_probs=23.4
Q ss_pred cceeeCCCCCccchhhhhhccccccCCCC
Q 027446 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIE 70 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L~~H~~~eH~~e 70 (223)
-.+=.|--||+.+-+..+++|++ +|+..
T Consensus 15 ~~YRvC~~CgkPi~lsAIvdHLe-nhC~~ 42 (44)
T 2lo3_A 15 IQYRVCEKCGKPLALTAIVDHLE-NHCAG 42 (44)
T ss_dssp CCEEECTTTCCEEETTTHHHHHH-HCCTT
T ss_pred ccchhhcccCCcchHHHHHHHHH-HHhcc
Confidence 34568999999999999999998 57754
No 288
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=53.13 E-value=4.4 Score=24.09 Aligned_cols=21 Identities=33% Similarity=0.537 Sum_probs=11.6
Q ss_pred eeeCCCCCcc-chhhhhhcccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHID 64 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~ 64 (223)
.|.||.|... -|...|..|.+
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHHH
Confidence 4566666654 55555555543
No 289
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 2.60A {Geobacter metallireducens gs-15}
Probab=52.13 E-value=2.6 Score=32.01 Aligned_cols=43 Identities=23% Similarity=0.308 Sum_probs=24.6
Q ss_pred cceeeCCCCCccchhhh-hhccccccCC---CCCCc--cccCCccCccc
Q 027446 42 NAMFLCPFCAEDFDIVG-LCCHIDEDHP---IEAKN--GVCPVCAKRVG 84 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~-L~~H~~~eH~---~e~k~--~VCPVCa~~v~ 84 (223)
++.+.|+||+..++... -++|+.---. .+..| .+|+.|...-+
T Consensus 33 r~~~~C~yCg~~~~~~~~~vDHIiP~s~gG~~~~~Nl~~lC~~CN~~K~ 81 (112)
T 2qgp_A 33 IARGICHYCGEIFPPEELTMDHLVPVVRGGKSTRGNVVPACKECNNRKK 81 (112)
T ss_dssp HHHTBCTTTCCBCCGGGEEEEESSCTTTTCCCSTTTEEEEEHHHHHHHH
T ss_pred HcCCcCCCCCCcCCCCCcEEEEEeehhcCCCCChhhChhhCHHHHHHHc
Confidence 34579999999876433 3566642111 12233 46888876533
No 290
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=52.05 E-value=1 Score=33.05 Aligned_cols=46 Identities=28% Similarity=0.624 Sum_probs=26.8
Q ss_pred CccceeeCCCCCccc-hhhhh--hccccccCCC---CCCccccCCccCccch
Q 027446 40 DLNAMFLCPFCAEDF-DIVGL--CCHIDEDHPI---EAKNGVCPVCAKRVGT 85 (223)
Q Consensus 40 d~~~~F~CPfC~~~~-d~~~L--~~H~~~eH~~---e~k~~VCPVCa~~v~~ 85 (223)
+....+.||.|...+ +-..+ |-|.-=..+. -.....||+|...+..
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 11 ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp HHGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred ccCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 345678999999874 43333 4553211111 0123689999998764
No 291
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=51.93 E-value=1.3 Score=32.31 Aligned_cols=45 Identities=22% Similarity=0.485 Sum_probs=27.1
Q ss_pred ccceeeCCCCCccchhhhh---hccccccCCC----CCCccccCCccCccch
Q 027446 41 LNAMFLCPFCAEDFDIVGL---CCHIDEDHPI----EAKNGVCPVCAKRVGT 85 (223)
Q Consensus 41 ~~~~F~CPfC~~~~d~~~L---~~H~~~eH~~----e~k~~VCPVCa~~v~~ 85 (223)
....+.||.|...|..... |-|.-=..+. ......||+|...+..
T Consensus 19 l~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 19 IAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 4567899999998654433 4442211111 1122689999998764
No 292
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.46 E-value=4.8 Score=27.04 Aligned_cols=22 Identities=27% Similarity=0.548 Sum_probs=18.7
Q ss_pred ceeeCCCCCccch-hhhhhcccc
Q 027446 43 AMFLCPFCAEDFD-IVGLCCHID 64 (223)
Q Consensus 43 ~~F~CPfC~~~~d-~~~L~~H~~ 64 (223)
-.|+||-|+..|. ...|..|+.
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 5899999999877 778888876
No 293
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=51.39 E-value=4 Score=32.77 Aligned_cols=26 Identities=31% Similarity=0.732 Sum_probs=17.4
Q ss_pred eeCCCCCccchhhhhhccccccCCCCCCccccCCccCc
Q 027446 45 FLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 45 F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
-+||.|+.++.- .+....|||-|+.-
T Consensus 28 P~CP~C~seytY------------eDg~l~vCPeC~hE 53 (138)
T 2akl_A 28 PPCPQCNSEYTY------------EDGALLVCPECAHE 53 (138)
T ss_dssp CCCTTTCCCCCE------------ECSSSEEETTTTEE
T ss_pred CCCCCCCCcceE------------ecCCeEECCccccc
Confidence 489999876421 12335799999863
No 294
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.45 E-value=5.8 Score=27.15 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=21.1
Q ss_pred ceeeCCCCCccchhhhhhccccccCCC
Q 027446 43 AMFLCPFCAEDFDIVGLCCHIDEDHPI 69 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~L~~H~~~eH~~ 69 (223)
..|.||+|+..|-...|-.|... |+.
T Consensus 42 ~~~~C~~C~~~~~~~~l~~H~~~-c~~ 67 (75)
T 2d9k_A 42 RTELCGNCGRNVLVKDLKTHPEV-CGR 67 (75)
T ss_dssp CEEECSSSCCEEETTGGGTHHHH-BTT
T ss_pred CceEcccCCCcCcHHHHHHHHHH-ccC
Confidence 46899999999888999999863 443
No 295
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=49.26 E-value=6.6 Score=26.94 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=13.7
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
-|.|+.|++. .....|..|...
T Consensus 13 py~C~~CgK~F~~~s~L~~H~r~ 35 (66)
T 2epp_A 13 ILPCGLCGKVFTDANRLRQHEAQ 35 (66)
T ss_dssp CCCCTTTCCCCSCHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHhhhhh
Confidence 3677777776 344566666654
No 296
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=48.64 E-value=6.1 Score=24.51 Aligned_cols=22 Identities=23% Similarity=0.351 Sum_probs=17.4
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. -....|..|+..
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 5999999998 556778888764
No 297
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=48.09 E-value=5.3 Score=29.65 Aligned_cols=11 Identities=27% Similarity=0.921 Sum_probs=8.9
Q ss_pred eCCCCCccchh
Q 027446 46 LCPFCAEDFDI 56 (223)
Q Consensus 46 ~CPfC~~~~d~ 56 (223)
+||.||..++.
T Consensus 49 ~CPvCgs~l~~ 59 (112)
T 1l8d_A 49 KCPVCGRELTD 59 (112)
T ss_dssp ECTTTCCEECH
T ss_pred CCCCCCCcCCH
Confidence 79999988763
No 298
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.06 E-value=4.1 Score=28.71 Aligned_cols=25 Identities=24% Similarity=0.513 Sum_probs=20.8
Q ss_pred eeeCCCCCcc-chhhhhhccccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHP 68 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~ 68 (223)
.|.|++|++. -....|..|+...|.
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~~h~~ 79 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTMAEHS 79 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred CEECCCCCCccCCHHHHHHHHHHHcC
Confidence 5999999998 567789999987664
No 299
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=48.03 E-value=6.1 Score=32.57 Aligned_cols=51 Identities=22% Similarity=0.452 Sum_probs=13.8
Q ss_pred eeeCCC----CCccchhhhhhccccccCCCCCCccccCC----ccCc-cchhhhhhhhhcccc
Q 027446 44 MFLCPF----CAEDFDIVGLCCHIDEDHPIEAKNGVCPV----CAKR-VGTDIVSHITMQHGN 97 (223)
Q Consensus 44 ~F~CPf----C~~~~d~~~L~~H~~~eH~~e~k~~VCPV----Ca~~-v~~d~i~Hi~~qH~~ 97 (223)
.|+||| |.+.+--.....|-.. -.-++.-||+ |.-. ...++..|++..|+.
T Consensus 6 ~~pC~~~~~GC~~~~~y~~~~~He~~---C~f~p~~Cp~~g~~C~~~G~~~~l~~H~~~~H~~ 65 (193)
T 2a25_A 6 LFPCKYASSGCEITLPHTEKADHEEL---CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKS 65 (193)
T ss_dssp ---------------------------------CEECCCC--CCCCEECSTTHHHHHHHHCTT
T ss_pred EecCCCCCCCCCcccccccccchhhc---CCCCCccCCCCCCCCcCCCCHHHHHHHHHHHCCC
Confidence 466776 6666665566566432 1223445665 6532 124677777666653
No 300
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=47.84 E-value=3.3 Score=30.02 Aligned_cols=45 Identities=22% Similarity=0.518 Sum_probs=25.1
Q ss_pred ccceeeCCCCCccchhhh--hhccccccCCC-----C-CCccccCCccCccch
Q 027446 41 LNAMFLCPFCAEDFDIVG--LCCHIDEDHPI-----E-AKNGVCPVCAKRVGT 85 (223)
Q Consensus 41 ~~~~F~CPfC~~~~d~~~--L~~H~~~eH~~-----e-~k~~VCPVCa~~v~~ 85 (223)
....+.||.|.+.+.... -|-|.-=..+. . .....||+|...+..
T Consensus 18 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred ccCCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 345678999988754322 24442211111 1 123589999998764
No 301
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=47.44 E-value=9.3 Score=27.97 Aligned_cols=36 Identities=19% Similarity=0.416 Sum_probs=25.5
Q ss_pred eeCCCCCccchhhhhhccccccCCCCCCccccCCccCccch
Q 027446 45 FLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 45 F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~~ 85 (223)
..||.|...+....+..- ........||||-..+..
T Consensus 49 ~~CP~Cr~~~~~~~l~~l-----~i~~~~~~C~iC~~~~~~ 84 (133)
T 4ap4_A 49 NTCPTCRKKINHKRYHPI-----YIGSGTVSCPICMDGYSE 84 (133)
T ss_dssp SBCTTTCCBCTTTCEEEC-----BCSSSSCBCTTTCCBHHH
T ss_pred CCCCCCCCcCcccccccc-----ccCCCCCCCCCCCCcccc
Confidence 389999998877665432 223556789999887653
No 302
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=46.96 E-value=2.3 Score=30.61 Aligned_cols=45 Identities=27% Similarity=0.549 Sum_probs=27.5
Q ss_pred ccceeeCCCCCccchhh-hh--hccccccCCC---CCCccccCCccCccch
Q 027446 41 LNAMFLCPFCAEDFDIV-GL--CCHIDEDHPI---EAKNGVCPVCAKRVGT 85 (223)
Q Consensus 41 ~~~~F~CPfC~~~~d~~-~L--~~H~~~eH~~---e~k~~VCPVCa~~v~~ 85 (223)
....+.||.|.+.+... .+ |-|.-=..+. -.....||+|...+..
T Consensus 19 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 19 IDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 34578999999875443 33 5553211111 1134689999998774
No 303
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.30 E-value=5.4 Score=23.34 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=17.6
Q ss_pred eeeCCCCCcc-chhhhhhccccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+.|+.. -....|..|+..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTHHH
T ss_pred CeECcccCcccCCHHHHHHHHHH
Confidence 5999999997 566778888764
No 304
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=46.27 E-value=8.8 Score=27.02 Aligned_cols=33 Identities=6% Similarity=0.174 Sum_probs=21.9
Q ss_pred CCccceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCc
Q 027446 39 DDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
..+.....||.|.-.+.... +....+||.|...
T Consensus 3 ~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (68)
T 2jr6_A 3 KKFLDILVCPVTKGRLEYHQ-----------DKQELWSRQAKLA 35 (68)
T ss_dssp CSSSCCCBCSSSCCBCEEET-----------TTTEEEETTTTEE
T ss_pred hHHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 34566789999998754322 1245789988654
No 305
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.92 E-value=2.5 Score=28.22 Aligned_cols=45 Identities=20% Similarity=0.386 Sum_probs=26.2
Q ss_pred CccceeeCCCCCccchhh-hhhccccccCCC---CCCccccCCccCccc
Q 027446 40 DLNAMFLCPFCAEDFDIV-GLCCHIDEDHPI---EAKNGVCPVCAKRVG 84 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~~-~L~~H~~~eH~~---e~k~~VCPVCa~~v~ 84 (223)
+....+.||.|.+.+... .-|-|.-=..+. -.+...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 11 QLTDEEECCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCCCCSSSCCSCCSEEETTTEEECHHHHHHSSCCCSSCHHHHHCTT
T ss_pred cCCCCCCCeeCCcCccCcccCCCCcccHHHHHHHHHCcCcCCCcCCccc
Confidence 445578999999874333 235553211111 124678999987654
No 306
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=45.68 E-value=9.3 Score=27.03 Aligned_cols=33 Identities=18% Similarity=0.436 Sum_probs=22.1
Q ss_pred CCccceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCc
Q 027446 39 DDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
........||.|.-.+.... +....+||.|...
T Consensus 3 ~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (70)
T 2js4_A 3 SRLLDILVCPVCKGRLEFQR-----------AQAELVCNADRLA 35 (70)
T ss_dssp CCCCCCCBCTTTCCBEEEET-----------TTTEEEETTTTEE
T ss_pred hHHhhheECCCCCCcCEEeC-----------CCCEEEcCCCCce
Confidence 34566789999998754322 1345789998654
No 307
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=45.41 E-value=8.8 Score=27.03 Aligned_cols=33 Identities=12% Similarity=0.338 Sum_probs=22.1
Q ss_pred CCccceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCc
Q 027446 39 DDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
..+.....||.|.-.+.... +....+||.|...
T Consensus 3 ~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (68)
T 2hf1_A 3 AKFLEILVCPLCKGPLVFDK-----------SKDELICKGDRLA 35 (68)
T ss_dssp CCCEEECBCTTTCCBCEEET-----------TTTEEEETTTTEE
T ss_pred hHHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 34567889999998654322 1345789998654
No 308
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=45.29 E-value=9 Score=20.37 Aligned_cols=21 Identities=24% Similarity=0.545 Sum_probs=14.1
Q ss_pred eeCC--CCCcc-chhhhhhccccc
Q 027446 45 FLCP--FCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 45 F~CP--fC~~~-~d~~~L~~H~~~ 65 (223)
|.|+ .|+.. -....|..|+..
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred cCCcCCCCCcccCCHhHHHHHHHH
Confidence 6776 78876 455667777653
No 309
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=44.99 E-value=8.4 Score=26.07 Aligned_cols=36 Identities=28% Similarity=0.563 Sum_probs=25.2
Q ss_pred eeeCCCCCc-cchhhhhhccccccCCCCCCccccCCccCccchhhhhh
Q 027446 44 MFLCPFCAE-DFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSH 90 (223)
Q Consensus 44 ~F~CPfC~~-~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~~d~i~H 90 (223)
...||.|+. ++ ..+ ++...+||..|-.-+..+.|.+
T Consensus 11 ~~~Cp~C~~~~l---------v~D--~~~ge~vC~~CGlVl~e~~iD~ 47 (58)
T 1dl6_A 11 RVTCPNHPDAIL---------VED--YRAGDMICPECGLVVGDRVIDV 47 (58)
T ss_dssp CCSBTTBSSSCC---------EEC--SSSCCEECTTTCCEECCSCCCC
T ss_pred cccCcCCCCCce---------eEe--CCCCeEEeCCCCCEEecccccc
Confidence 447999986 32 111 3456799999998888877654
No 310
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=44.30 E-value=1.8 Score=28.87 Aligned_cols=44 Identities=20% Similarity=0.657 Sum_probs=25.6
Q ss_pred ceeeCCCCCccchhh---------hhhccccccCCCC---CCccccCCccCccchh
Q 027446 43 AMFLCPFCAEDFDIV---------GLCCHIDEDHPIE---AKNGVCPVCAKRVGTD 86 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~---------~L~~H~~~eH~~e---~k~~VCPVCa~~v~~d 86 (223)
..+.||.|.+.+... .-|-|.-=..+.. .+...||+|...+..+
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 64 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChh
Confidence 357899999986553 2244532111111 1234899999887643
No 311
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=44.17 E-value=7.8 Score=27.48 Aligned_cols=40 Identities=18% Similarity=0.358 Sum_probs=21.0
Q ss_pred ceeeCCCCCccchhhhhh--ccccccCCCCCCc--cccCCccCc
Q 027446 43 AMFLCPFCAEDFDIVGLC--CHIDEDHPIEAKN--GVCPVCAKR 82 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~L~--~H~~~eH~~e~k~--~VCPVCa~~ 82 (223)
..|.|+.|+--+|...=- .-+.---+++.-. -+||+|.+.
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~ 49 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSP 49 (70)
T ss_dssp SCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCB
T ss_pred ceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCC
Confidence 468899998877754310 0111111222222 389999883
No 312
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.73 E-value=9.8 Score=27.35 Aligned_cols=41 Identities=32% Similarity=0.696 Sum_probs=21.0
Q ss_pred cceeeCCCCCccc-hhhhh--hccccccCCC---------CCCccccCC--ccCc
Q 027446 42 NAMFLCPFCAEDF-DIVGL--CCHIDEDHPI---------EAKNGVCPV--CAKR 82 (223)
Q Consensus 42 ~~~F~CPfC~~~~-d~~~L--~~H~~~eH~~---------e~k~~VCPV--Ca~~ 82 (223)
...|.||.|.+.| |-+.+ |-|.-+..+. ......||+ |...
T Consensus 5 ~~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 4467788777653 33332 3333221111 113468999 9865
No 313
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.46 E-value=2.2 Score=29.97 Aligned_cols=12 Identities=33% Similarity=0.825 Sum_probs=8.9
Q ss_pred ccccCCccCccc
Q 027446 73 NGVCPVCAKRVG 84 (223)
Q Consensus 73 ~~VCPVCa~~v~ 84 (223)
+..||+|...+.
T Consensus 64 ~~~CP~CR~~~~ 75 (81)
T 2ecl_A 64 NNRCPLCQQDWV 75 (81)
T ss_dssp CCBCTTTCCBCC
T ss_pred CCCCCCcCCCcc
Confidence 358999987654
No 314
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=42.44 E-value=5 Score=28.62 Aligned_cols=48 Identities=19% Similarity=0.434 Sum_probs=29.9
Q ss_pred eeeCCCCCccchhhhh-----hccc-----cccCCC----C--CCccccCC--ccCc--cchhhhhhh
Q 027446 44 MFLCPFCAEDFDIVGL-----CCHI-----DEDHPI----E--AKNGVCPV--CAKR--VGTDIVSHI 91 (223)
Q Consensus 44 ~F~CPfC~~~~d~~~L-----~~H~-----~~eH~~----e--~k~~VCPV--Ca~~--v~~d~i~Hi 91 (223)
.|.||.|.+++..... |-|. -..|-. + ..+..||. |... +..+.+..+
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~l 72 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECM 72 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHH
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHH
Confidence 6789999987654332 5552 111111 1 13568999 9999 887777654
No 315
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=41.96 E-value=14 Score=25.80 Aligned_cols=30 Identities=27% Similarity=0.576 Sum_probs=22.4
Q ss_pred cceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCcc
Q 027446 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRV 83 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v 83 (223)
.-.|.|.-|+.++++.. ...+-||-|..++
T Consensus 19 ~v~Y~C~~Cg~~~~l~~------------~~~iRC~~CG~RI 48 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQA------------KEVIRCRECGHRV 48 (63)
T ss_dssp CCCCBCSSSCCBCCCCS------------SSCCCCSSSCCCC
T ss_pred CeEEECCCCCCeeecCC------------CCceECCCCCcEE
Confidence 46899999999887441 2357899998654
No 316
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=41.85 E-value=10 Score=27.79 Aligned_cols=14 Identities=14% Similarity=0.591 Sum_probs=10.5
Q ss_pred ceeeCCCCCccchh
Q 027446 43 AMFLCPFCAEDFDI 56 (223)
Q Consensus 43 ~~F~CPfC~~~~d~ 56 (223)
....||||+..|-.
T Consensus 52 g~~~CpYCg~~f~l 65 (80)
T 2jvm_A 52 GFVECGYCDRRYIH 65 (80)
T ss_dssp CEEECSSSSCEEEE
T ss_pred CeEECCCCCCEEEe
Confidence 46799999987433
No 317
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=40.83 E-value=10 Score=26.78 Aligned_cols=33 Identities=12% Similarity=0.360 Sum_probs=21.9
Q ss_pred CCccceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCc
Q 027446 39 DDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
..+.....||.|...+.... +....+||.|...
T Consensus 3 ~~LLeiL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (69)
T 2pk7_A 3 TKLLDILACPICKGPLKLSA-----------DKTELISKGAGLA 35 (69)
T ss_dssp CCGGGTCCCTTTCCCCEECT-----------TSSEEEETTTTEE
T ss_pred hHHHhheeCCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 34566789999998754321 1345789998654
No 318
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=40.64 E-value=6.9 Score=26.84 Aligned_cols=44 Identities=30% Similarity=0.548 Sum_probs=25.2
Q ss_pred ccceeeCCCCCccc-hhhhh-hccc-cccCCCCCCccccCCccCccch
Q 027446 41 LNAMFLCPFCAEDF-DIVGL-CCHI-DEDHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 41 ~~~~F~CPfC~~~~-d~~~L-~~H~-~~eH~~e~k~~VCPVCa~~v~~ 85 (223)
....+.||.|...+ +...| |-|. -=..+... -..||+|...+..
T Consensus 21 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~-~~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 21 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEA-VDKCPMCYTVITF 67 (74)
T ss_dssp HHHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTT-CSBCTTTCCBCSE
T ss_pred CccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhc-CccCCCcCcCccC
Confidence 34568999999874 43332 4443 11111111 1689999987753
No 319
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=40.37 E-value=9.4 Score=27.05 Aligned_cols=13 Identities=23% Similarity=0.818 Sum_probs=10.0
Q ss_pred ceeeCCCCCccch
Q 027446 43 AMFLCPFCAEDFD 55 (223)
Q Consensus 43 ~~F~CPfC~~~~d 55 (223)
....||||+..|-
T Consensus 39 g~~~CpYCg~~f~ 51 (67)
T 2jrr_A 39 GWVECPYCDCKYV 51 (67)
T ss_dssp SEEEETTTTEEEE
T ss_pred CeEECCCCCCEEE
Confidence 4678999998643
No 320
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=40.31 E-value=9.7 Score=19.50 Aligned_cols=20 Identities=25% Similarity=0.461 Sum_probs=13.8
Q ss_pred eeCC--CCCcc-chhhhhhcccc
Q 027446 45 FLCP--FCAED-FDIVGLCCHID 64 (223)
Q Consensus 45 F~CP--fC~~~-~d~~~L~~H~~ 64 (223)
|.|+ .|+.. -....|..|..
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHG
T ss_pred CCCcCCcCcCccCCHHHHHHHHH
Confidence 6788 88877 45566777754
No 321
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=40.22 E-value=4.3 Score=30.49 Aligned_cols=23 Identities=30% Similarity=0.524 Sum_probs=13.7
Q ss_pred hccccccCCCCC---CccccCCccCc
Q 027446 60 CCHIDEDHPIEA---KNGVCPVCAKR 82 (223)
Q Consensus 60 ~~H~~~eH~~e~---k~~VCPVCa~~ 82 (223)
|.|.--.|+.+. .+..||+|...
T Consensus 73 C~H~FH~~Ci~~Wl~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 73 CNHAFHFHCISRWLKTRQVCPLDNRE 98 (106)
T ss_dssp TSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred cCcEECHHHHHHHHHcCCcCcCCCCc
Confidence 555544444422 35679999875
No 322
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=39.79 E-value=7.3 Score=23.55 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=14.2
Q ss_pred eeeCCCCCcc-chhhhhhccc
Q 027446 44 MFLCPFCAED-FDIVGLCCHI 63 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~ 63 (223)
-|.|+.|++. -....|..|.
T Consensus 8 p~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEETTTTEECSCHHHHHHHH
T ss_pred CeECCCCCCccCCHhHccCcC
Confidence 4788888887 4456677775
No 323
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=39.08 E-value=13 Score=28.59 Aligned_cols=28 Identities=21% Similarity=0.352 Sum_probs=20.7
Q ss_pred ceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCc
Q 027446 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
..|.|--||..| .. --.++..||.|...
T Consensus 66 ~p~~C~~CG~~F-~~-----------~~~kPsrCP~CkSe 93 (105)
T 2gmg_A 66 KPAQCRKCGFVF-KA-----------EINIPSRCPKCKSE 93 (105)
T ss_dssp CCCBBTTTCCBC-CC-----------CSSCCSSCSSSCCC
T ss_pred ECcChhhCcCee-cc-----------cCCCCCCCcCCCCC
Confidence 468999999998 11 12456899999874
No 324
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=38.70 E-value=4.4 Score=29.89 Aligned_cols=47 Identities=17% Similarity=0.264 Sum_probs=27.4
Q ss_pred CCccceeeCCCCCccchhhh--hhccccccCCC----CCCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFDIVG--LCCHIDEDHPI----EAKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~--L~~H~~~eH~~----e~k~~VCPVCa~~v~~ 85 (223)
++....|.||.|.+.+.... -|-|.-=..+. ......||+|...+..
T Consensus 18 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 18 AHFVKSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred HhccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 35567899999998754332 23332111111 1124579999998764
No 325
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=38.49 E-value=4.8 Score=25.32 Aligned_cols=40 Identities=30% Similarity=0.577 Sum_probs=20.9
Q ss_pred eeeCCCCCccchh-----hhh-hccccccCCCC---CCccccCCccCcc
Q 027446 44 MFLCPFCAEDFDI-----VGL-CCHIDEDHPIE---AKNGVCPVCAKRV 83 (223)
Q Consensus 44 ~F~CPfC~~~~d~-----~~L-~~H~~~eH~~e---~k~~VCPVCa~~v 83 (223)
.+.||.|.+.+.. ..| |-|.-=.++.. .....||+|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 53 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPS 53 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcC
Confidence 4578888877532 112 44432222211 1126799998765
No 326
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=38.45 E-value=10 Score=27.04 Aligned_cols=26 Identities=27% Similarity=0.737 Sum_probs=20.6
Q ss_pred eeeCCCCCccc-hhhhhhccccccCCC
Q 027446 44 MFLCPFCAEDF-DIVGLCCHIDEDHPI 69 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~~eH~~ 69 (223)
.|.|+.|++.| ....|..|+...|..
T Consensus 62 ~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 62 MFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 59999999985 567899996566754
No 327
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=37.93 E-value=8.1 Score=28.70 Aligned_cols=40 Identities=18% Similarity=0.302 Sum_probs=22.5
Q ss_pred cceeeCCCCCccchhhhhh--ccccccCCCCCC--ccccCCccC
Q 027446 42 NAMFLCPFCAEDFDIVGLC--CHIDEDHPIEAK--NGVCPVCAK 81 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L~--~H~~~eH~~e~k--~~VCPVCa~ 81 (223)
...|.|+.||--+|...-- .-+.---+++.- .-+||+|.+
T Consensus 33 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 76 (87)
T 1s24_A 33 YLKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGA 76 (87)
T ss_dssp CCEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCC
T ss_pred CceEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCC
Confidence 4589999999888764210 001111122222 238999987
No 328
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=37.72 E-value=11 Score=27.25 Aligned_cols=25 Identities=20% Similarity=0.455 Sum_probs=20.3
Q ss_pred eeeCCCCCcc-chhhhhhccccccCC
Q 027446 44 MFLCPFCAED-FDIVGLCCHIDEDHP 68 (223)
Q Consensus 44 ~F~CPfC~~~-~d~~~L~~H~~~eH~ 68 (223)
.|.|++|+.. -....|..|+...|.
T Consensus 100 ~~~C~~C~k~f~~~~~l~~H~~~h~~ 125 (129)
T 2wbt_A 100 TKVCPVCKKEFTSTDSALDHVCKKHN 125 (129)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHCC
Confidence 4899999998 566789999887654
No 329
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.72 E-value=12 Score=22.68 Aligned_cols=22 Identities=27% Similarity=0.526 Sum_probs=17.1
Q ss_pred eeeCCC--CCcc-chhhhhhccccc
Q 027446 44 MFLCPF--CAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPf--C~~~-~d~~~L~~H~~~ 65 (223)
-|.|++ |+.- .....|..|+..
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 489987 9997 677788888753
No 330
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=37.31 E-value=21 Score=27.96 Aligned_cols=46 Identities=26% Similarity=0.437 Sum_probs=35.3
Q ss_pred eeeCCCCCccchhhhhhccccccCCCCCCccccCCccCcc-chhhhhhh
Q 027446 44 MFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRV-GTDIVSHI 91 (223)
Q Consensus 44 ~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v-~~d~i~Hi 91 (223)
...||.|+..+....|..|+..+= ..+.+.||-|...+ ..++..|.
T Consensus 110 ~v~C~~C~~~~~r~~l~~H~~~~C--~~r~~~C~~C~~~~~~~~l~~H~ 156 (170)
T 3hcs_A 110 LMDCPQCQRPFQKFHINIHILKDC--PRRQVSCDNCAASMAFEDKEIHD 156 (170)
T ss_dssp EEECTTTCCEEEGGGHHHHHHHTC--TTCEEECTTTCCEEEGGGHHHHH
T ss_pred eeECCCCChHHHHHHHHHHhhhhC--CCCCeECCCCCCccCHHHHHhHH
Confidence 468999999889999999986443 34667899998865 46787774
No 331
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=36.18 E-value=14 Score=19.60 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=14.3
Q ss_pred eeeCC--CCCcc-chhhhhhccccc
Q 027446 44 MFLCP--FCAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CP--fC~~~-~d~~~L~~H~~~ 65 (223)
.|.|+ .|+.. .....|..|...
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 36787 68876 445666777653
No 332
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=35.45 E-value=7.9 Score=28.96 Aligned_cols=39 Identities=15% Similarity=0.361 Sum_probs=19.7
Q ss_pred eCCCCCccchhhhhhccc----cccCCCCC-CccccCCccCccc
Q 027446 46 LCPFCAEDFDIVGLCCHI----DEDHPIEA-KNGVCPVCAKRVG 84 (223)
Q Consensus 46 ~CPfC~~~~d~~~L~~H~----~~eH~~e~-k~~VCPVCa~~v~ 84 (223)
.||+|+...-+..-.... ...-.++. ...+|+.|...+.
T Consensus 4 ~Cp~Cg~~~~~~~~~~~~~~~kg~~~~v~~v~~~~C~~CGE~~~ 47 (133)
T 3o9x_A 4 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIM 47 (133)
T ss_dssp BCTTTSSSBEEEEEEEEEEEETTEEEEEEEEEEEEESSSSCEEC
T ss_pred CCCcCCCCceeeceEEEEEEECCEEEEECCCceeECCCCCCEee
Confidence 799999752122111111 11111122 3458999998754
No 333
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=35.21 E-value=4.3 Score=27.23 Aligned_cols=43 Identities=23% Similarity=0.467 Sum_probs=24.4
Q ss_pred cceeeCCCCCcc-chhhhh---hcccc-ccCC---CCCCccccCCccCccc
Q 027446 42 NAMFLCPFCAED-FDIVGL---CCHID-EDHP---IEAKNGVCPVCAKRVG 84 (223)
Q Consensus 42 ~~~F~CPfC~~~-~d~~~L---~~H~~-~eH~---~e~k~~VCPVCa~~v~ 84 (223)
.....|+.|.+. .|...+ |-|.- =.-+ ...++..||+|...+.
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 5 NLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GGGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred CcCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 345689999886 454443 55641 0001 1112357999998764
No 334
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=34.79 E-value=14 Score=20.73 Aligned_cols=21 Identities=19% Similarity=0.585 Sum_probs=15.6
Q ss_pred eeeCCC--CCccc-hhhhhhcccc
Q 027446 44 MFLCPF--CAEDF-DIVGLCCHID 64 (223)
Q Consensus 44 ~F~CPf--C~~~~-d~~~L~~H~~ 64 (223)
.|.|++ |+..| ....|..|..
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~ 31 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLR 31 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHH
Confidence 589986 99984 5666777765
No 335
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=34.74 E-value=13 Score=33.55 Aligned_cols=43 Identities=19% Similarity=0.466 Sum_probs=27.8
Q ss_pred cceeeCCCCCcc-chhhhh-hccc-cccCCCCCCccccCCccCccch
Q 027446 42 NAMFLCPFCAED-FDIVGL-CCHI-DEDHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 42 ~~~F~CPfC~~~-~d~~~L-~~H~-~~eH~~e~k~~VCPVCa~~v~~ 85 (223)
...+.||.|... .+...| |-|. -=..|...- ..||+|...+..
T Consensus 293 ~~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~-~~CP~CR~~i~~ 338 (345)
T 3t6p_A 293 QEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSL-RKCPICRGIIKG 338 (345)
T ss_dssp HTTCBCTTTSSSBCCEEEETTCCEEECTTTGGGC-SBCTTTCCBCCE
T ss_pred cCCCCCCccCCcCCceEEcCCCChhHhHHHHhcC-CcCCCCCCCccC
Confidence 346899999987 555544 6665 333333322 689999987653
No 336
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=34.67 E-value=17 Score=36.88 Aligned_cols=35 Identities=23% Similarity=0.625 Sum_probs=22.7
Q ss_pred cceeeCCCCCccchhhhhhccccccCCCCCCccccCCccC
Q 027446 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAK 81 (223)
Q Consensus 42 ~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~ 81 (223)
-..|.||.|+..|....-.. -.+.+..+.||.|.-
T Consensus 247 s~~~~c~~~~~~~~~~~~~~-----fsfn~p~g~C~~C~G 281 (916)
T 3pih_A 247 SENLMCPVCGIGFPEITPKL-----FSFNSPYGACPNCHG 281 (916)
T ss_dssp ESSCBCTTTCCCCCCCSGGG-----GCTTSTTTBCTTTTT
T ss_pred cccccCcccCCccCCCCHhh-----cCCCCCCCcCCeeec
Confidence 35689999997654433211 124455799999975
No 337
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=34.59 E-value=8.3 Score=29.66 Aligned_cols=37 Identities=27% Similarity=0.564 Sum_probs=0.0
Q ss_pred eCCCCCccchhh--------------------hhhccccccCCCCC---CccccCCccCc
Q 027446 46 LCPFCAEDFDIV--------------------GLCCHIDEDHPIEA---KNGVCPVCAKR 82 (223)
Q Consensus 46 ~CPfC~~~~d~~--------------------~L~~H~~~eH~~e~---k~~VCPVCa~~ 82 (223)
.|+.|-++|+.. .-|.|.--.|+... .+..||+|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp ------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 688888777642 13777776677654 35689999775
No 338
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=34.36 E-value=8.2 Score=25.36 Aligned_cols=41 Identities=32% Similarity=0.472 Sum_probs=23.5
Q ss_pred eeeCCCCCccchh---hhhhccccccCCCC---CCccccCCccCccc
Q 027446 44 MFLCPFCAEDFDI---VGLCCHIDEDHPIE---AKNGVCPVCAKRVG 84 (223)
Q Consensus 44 ~F~CPfC~~~~d~---~~L~~H~~~eH~~e---~k~~VCPVCa~~v~ 84 (223)
...||.|.+.+.. ..-|-|.-=..+.. .+...||+|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 3479999887543 22355542222221 12357999988775
No 339
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=34.24 E-value=12 Score=25.05 Aligned_cols=14 Identities=36% Similarity=1.006 Sum_probs=12.0
Q ss_pred CccceeeCCCCCcc
Q 027446 40 DLNAMFLCPFCAED 53 (223)
Q Consensus 40 d~~~~F~CPfC~~~ 53 (223)
+++..+.||.|+..
T Consensus 31 ~lP~dw~CP~Cg~~ 44 (52)
T 1yk4_A 31 DLPDDWVCPLCGAP 44 (52)
T ss_dssp GSCTTCBCTTTCCB
T ss_pred HCCCCCcCCCCCCC
Confidence 67888999999974
No 340
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=33.38 E-value=16 Score=25.68 Aligned_cols=33 Identities=12% Similarity=0.055 Sum_probs=21.2
Q ss_pred CCccceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCc
Q 027446 39 DDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
........||.|.-.+.... +....|||-|...
T Consensus 5 ~~LLeiL~CP~ck~~L~~~~-----------~~g~LvC~~c~~~ 37 (67)
T 2jny_A 5 PQLLEVLACPKDKGPLRYLE-----------SEQLLVNERLNLA 37 (67)
T ss_dssp GGGTCCCBCTTTCCBCEEET-----------TTTEEEETTTTEE
T ss_pred HHHHHHhCCCCCCCcCeEeC-----------CCCEEEcCCCCcc
Confidence 44556789999988644321 2345689888553
No 341
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=32.19 E-value=9.9 Score=28.18 Aligned_cols=47 Identities=21% Similarity=0.323 Sum_probs=27.7
Q ss_pred CCccceeeCCCCCccchhhh--hhccccccCCC----CCCccccCCccCccch
Q 027446 39 DDLNAMFLCPFCAEDFDIVG--LCCHIDEDHPI----EAKNGVCPVCAKRVGT 85 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~~--L~~H~~~eH~~----e~k~~VCPVCa~~v~~ 85 (223)
+.....|.||.|.+.+.... -|-|.-=..+. ......||+|...+..
T Consensus 13 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 13 PPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp SCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred cCCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 45677899999998754332 24442111111 1122389999998764
No 342
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=32.09 E-value=19 Score=21.22 Aligned_cols=18 Identities=39% Similarity=0.726 Sum_probs=11.0
Q ss_pred ccccCCccCc-cchhhhhh
Q 027446 73 NGVCPVCAKR-VGTDIVSH 90 (223)
Q Consensus 73 ~~VCPVCa~~-v~~d~i~H 90 (223)
.|-||||-.+ +...+-.|
T Consensus 6 ~vqcpvcqq~mpaahin~h 24 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAHINSH 24 (29)
T ss_dssp EEECTTTCCEEEGGGHHHH
T ss_pred eeeChHHHHhCcHHHHHHH
Confidence 4679999875 44444444
No 343
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=31.51 E-value=3.8 Score=27.03 Aligned_cols=43 Identities=21% Similarity=0.470 Sum_probs=24.7
Q ss_pred eeeCCCCCc-cchhh------hhhccccccCCC----CCCccccCCccCccchh
Q 027446 44 MFLCPFCAE-DFDIV------GLCCHIDEDHPI----EAKNGVCPVCAKRVGTD 86 (223)
Q Consensus 44 ~F~CPfC~~-~~d~~------~L~~H~~~eH~~----e~k~~VCPVCa~~v~~d 86 (223)
++.||.|.+ .+... .-|-|.-=..+. ..+...||+|...+..+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 56 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKS 56 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccc
Confidence 467999988 54433 125553211111 12356799999987653
No 344
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=30.89 E-value=11 Score=27.63 Aligned_cols=10 Identities=30% Similarity=1.059 Sum_probs=5.9
Q ss_pred cccCCccCcc
Q 027446 74 GVCPVCAKRV 83 (223)
Q Consensus 74 ~VCPVCa~~v 83 (223)
+.||-|...+
T Consensus 32 afCPeCgq~L 41 (81)
T 2jrp_A 32 ALCPDCRQPL 41 (81)
T ss_dssp EECSSSCSCC
T ss_pred ccCcchhhHH
Confidence 4566666654
No 345
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=30.43 E-value=14 Score=25.00 Aligned_cols=14 Identities=29% Similarity=0.952 Sum_probs=11.9
Q ss_pred CccceeeCCCCCcc
Q 027446 40 DLNAMFLCPFCAED 53 (223)
Q Consensus 40 d~~~~F~CPfC~~~ 53 (223)
+++..+.||-|+..
T Consensus 32 ~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 32 DIPDDWVCPLCGVG 45 (54)
T ss_dssp GSCTTCBCTTTCCB
T ss_pred HCCCCCcCcCCCCc
Confidence 67788999999974
No 346
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.29 E-value=9.1 Score=27.58 Aligned_cols=16 Identities=19% Similarity=0.297 Sum_probs=12.8
Q ss_pred hhhhhhhhhcccchhh
Q 027446 85 TDIVSHITMQHGNFFK 100 (223)
Q Consensus 85 ~d~i~Hi~~qH~~~fk 100 (223)
.+|.+||..-|..-|+
T Consensus 49 S~L~rHL~~~H~~e~~ 64 (76)
T 2djr_A 49 TALWKHLKSMHREELE 64 (76)
T ss_dssp CHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHCHHHHH
Confidence 4788898888887776
No 347
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.96 E-value=19 Score=19.94 Aligned_cols=22 Identities=27% Similarity=0.520 Sum_probs=15.3
Q ss_pred eeeCCC--CCcc-chhhhhhccccc
Q 027446 44 MFLCPF--CAED-FDIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CPf--C~~~-~d~~~L~~H~~~ 65 (223)
.|.|++ |+.. .....|..|+..
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH
Confidence 488985 9887 455667777653
No 348
>1e7l_A GP49, recombination endonuclease VII; resolvase, holliday junction, DNAse; HET: SO4; 1.32A {Bacteriophage T4} SCOP: a.140.4.1 d.4.1.5 PDB: 2qnc_A* 1en7_A 1e7d_A 2qnf_A*
Probab=29.60 E-value=7.9 Score=31.73 Aligned_cols=42 Identities=21% Similarity=0.506 Sum_probs=27.1
Q ss_pred eeeCCCCCccchhhhhhccccccCCC------CCCccccCCccCccch
Q 027446 44 MFLCPFCAEDFDIVGLCCHIDEDHPI------EAKNGVCPVCAKRVGT 85 (223)
Q Consensus 44 ~F~CPfC~~~~d~~~L~~H~~~eH~~------e~k~~VCPVCa~~v~~ 85 (223)
.-.||.|+..|+...=-.|++=.|.. ..+-++|.-|...+|.
T Consensus 20 ~g~C~IC~~~l~~~~~~~~vDHdH~~~g~~tG~VRGlLC~~CN~~lG~ 67 (157)
T 1e7l_A 20 NGKCLICQRELNPDVQANHLDHDHELNGPKAGKVRGLLCNLCDAAEGQ 67 (157)
T ss_dssp TTBCTTTCCBCCSSGGGSEEEECCCCSSTTTTBEEEEECHHHHHHHHH
T ss_pred CCcCcccCCccccccccccccCCCCCCCCCCCcchhhccHhHhchhcc
Confidence 34899999987644324466656722 2233579999887663
No 349
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.06 E-value=19 Score=25.94 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=22.1
Q ss_pred eeeCCC--CCcc-chhhhhhccccccCCCCCCcccc
Q 027446 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVC 76 (223)
Q Consensus 44 ~F~CPf--C~~~-~d~~~L~~H~~~eH~~e~k~~VC 76 (223)
-|.|++ |+.- -....|..|+...|..+ |+.+|
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgE-KP~~~ 61 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSD-LPAFS 61 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSSSC-CCCCC
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCCCC-CCccc
Confidence 489976 9998 55667888876567653 34444
No 350
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=28.83 E-value=25 Score=36.20 Aligned_cols=34 Identities=21% Similarity=0.593 Sum_probs=22.1
Q ss_pred ceeeCCCCCccchhhhhhccccccCCCCCCccccCCccC
Q 027446 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAK 81 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~ 81 (223)
..|.||.|+..|...+=. . =.|.+-.+.||.|.-
T Consensus 266 ~~~~cp~~g~~~~~~~p~--~---FSfN~p~GaCp~C~G 299 (972)
T 2r6f_A 266 EKHACPYCGFSIGELEPR--L---FSFNSPFGACPDCDG 299 (972)
T ss_dssp SSEECTTTCCEEECCCGG--G---GCSSSTTTBCTTTTS
T ss_pred ccccCCCCCCcCCCCChh--h---cCcCCCCCCCCCCcC
Confidence 569999999865533211 1 124455699999984
No 351
>3al0_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima}
Probab=28.65 E-value=23 Score=33.66 Aligned_cols=16 Identities=31% Similarity=0.985 Sum_probs=13.6
Q ss_pred CCCCccccCCccCccc
Q 027446 69 IEAKNGVCPVCAKRVG 84 (223)
Q Consensus 69 ~e~k~~VCPVCa~~v~ 84 (223)
.+++.-|||||...||
T Consensus 32 ~~pNt~vcpv~lg~PG 47 (482)
T 3al0_B 32 LPPNTAICPVCTGQPG 47 (482)
T ss_dssp CCTTSSCCTTTTTCTT
T ss_pred CCCcCccCceecCCCC
Confidence 3577789999999988
No 352
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=28.43 E-value=15 Score=31.01 Aligned_cols=25 Identities=28% Similarity=0.545 Sum_probs=19.7
Q ss_pred cceeeCCCCCccc-h-hhhhhcccccc
Q 027446 42 NAMFLCPFCAEDF-D-IVGLCCHIDED 66 (223)
Q Consensus 42 ~~~F~CPfC~~~~-d-~~~L~~H~~~e 66 (223)
.....|+.|++.| . ...|-.|+++|
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHHH
Confidence 3467899999987 3 89999998864
No 353
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=28.31 E-value=7.2 Score=30.41 Aligned_cols=44 Identities=20% Similarity=0.437 Sum_probs=26.3
Q ss_pred CCccceeeCCCCCccchhh--hhhccc-----cccCCCCCCccccCCccCcc
Q 027446 39 DDLNAMFLCPFCAEDFDIV--GLCCHI-----DEDHPIEAKNGVCPVCAKRV 83 (223)
Q Consensus 39 ~d~~~~F~CPfC~~~~d~~--~L~~H~-----~~eH~~e~k~~VCPVCa~~v 83 (223)
+.....|.||.|...|... .-|-|. ... ........||+|...+
T Consensus 26 ~~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~-~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 26 TKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS-ILSSGPQNCAACVHEG 76 (141)
T ss_dssp GGCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHH-HGGGSCEECHHHHHTT
T ss_pred ccCCcCcCCCCCChhhcCcEECCCCCccCHHHHHH-HHhcCCCCCCCCCCcc
Confidence 3556789999999875432 234442 221 1123446899998753
No 354
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=27.72 E-value=31 Score=25.55 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=24.0
Q ss_pred CCCCCccccCCccCccchhhhhhhhhcccchhh
Q 027446 68 PIEAKNGVCPVCAKRVGTDIVSHITMQHGNFFK 100 (223)
Q Consensus 68 ~~e~k~~VCPVCa~~v~~d~i~Hi~~qH~~~fk 100 (223)
......+||.+|.+... -+-+||+..||--..
T Consensus 16 si~~d~iiClecGK~fK-~LkRHL~~~hgltpe 47 (87)
T 2jsp_A 16 SVQDDHIVCLECGGSFK-SLKRHLTTHHSMTPE 47 (87)
T ss_dssp TBCSSCEECTBTCCEES-BHHHHHHHTTCSCHH
T ss_pred ccCCCceEecccchhhH-HHHHHHHHccCCCHH
Confidence 34556679999999766 477999888887654
No 355
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=27.60 E-value=21 Score=24.00 Aligned_cols=32 Identities=19% Similarity=0.531 Sum_probs=21.4
Q ss_pred CCCccceeeCCCCCccchhhhhhccccccCCCCCCccccC--CccCc
Q 027446 38 DDDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCP--VCAKR 82 (223)
Q Consensus 38 d~d~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCP--VCa~~ 82 (223)
|........||.|...+.... ...+|+ -|...
T Consensus 4 d~~lL~iL~CP~c~~~L~~~~-------------~~L~C~~~~c~~~ 37 (56)
T 2kpi_A 4 EAGLLEILACPACHAPLEERD-------------AELICTGQDCGLA 37 (56)
T ss_dssp CCSCTTSCCCSSSCSCEEEET-------------TEEEECSSSCCCE
T ss_pred CHHHHhheeCCCCCCcceecC-------------CEEEcCCcCCCcE
Confidence 345667889999998754332 456788 77543
No 356
>3h0l_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=27.41 E-value=25 Score=33.38 Aligned_cols=17 Identities=41% Similarity=0.812 Sum_probs=14.4
Q ss_pred CCCCCccccCCccCccc
Q 027446 68 PIEAKNGVCPVCAKRVG 84 (223)
Q Consensus 68 ~~e~k~~VCPVCa~~v~ 84 (223)
-.+++.-|||||...||
T Consensus 32 g~~PNt~v~pv~lg~PG 48 (478)
T 3h0l_B 32 GAEPNTNVCPVCLGMPG 48 (478)
T ss_dssp TCCTTCSCCTTTTTCTT
T ss_pred CCCCccccCccccCCCC
Confidence 34677889999999988
No 357
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=27.34 E-value=26 Score=23.11 Aligned_cols=35 Identities=23% Similarity=0.469 Sum_probs=19.4
Q ss_pred eeeCCCCCcc---chhhhhhccccccCCCCCCccccCCccCc
Q 027446 44 MFLCPFCAED---FDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 44 ~F~CPfC~~~---~d~~~L~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
.++||-|+.. |...-+.. .+-+ .....+|+-|..+
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rs---adep-~T~fy~C~~Cg~~ 52 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRA---GDEP-STIFYKCTKCGHT 52 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSS---SSCS-SEEEEEESSSCCE
T ss_pred EeECCCCCCCEEEEEEeeccc---CCCC-CcEEEEcCCCCCE
Confidence 6899999973 33222211 1111 2234689998754
No 358
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=26.62 E-value=25 Score=26.69 Aligned_cols=25 Identities=20% Similarity=0.488 Sum_probs=18.0
Q ss_pred CccceeeCCCCCccchhhhhhcccc
Q 027446 40 DLNAMFLCPFCAEDFDIVGLCCHID 64 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~~~L~~H~~ 64 (223)
+...+|.||-|+..+--.-.--|++
T Consensus 66 ~~s~~~~C~nC~R~vaa~RFApHLe 90 (99)
T 3mhs_C 66 ESSQYIHCENCGRDVSANRLAAHLQ 90 (99)
T ss_dssp TTSCEEECTTTCCEEEGGGHHHHHH
T ss_pred cCCCeEECCCCCCCchhhhhHHHHH
Confidence 4456788888888777777666665
No 359
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=26.30 E-value=25 Score=26.10 Aligned_cols=16 Identities=19% Similarity=0.615 Sum_probs=11.7
Q ss_pred ceeeCCCCCccchhhh
Q 027446 43 AMFLCPFCAEDFDIVG 58 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~~ 58 (223)
..-.||||+..|-...
T Consensus 47 g~~~CpYCg~~y~~~~ 62 (87)
T 2jz8_A 47 DEKICPYCSTLYRYDP 62 (87)
T ss_dssp CEECCTTTCCEEECCT
T ss_pred CeEECCCCCCEeEcCC
Confidence 4679999998765444
No 360
>3bhp_A UPF0291 protein YNZC; NESG, SR384, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.01A {Bacillus subtilis}
Probab=26.22 E-value=52 Score=22.77 Aligned_cols=21 Identities=14% Similarity=0.637 Sum_probs=15.3
Q ss_pred CCCChHHHHHHHh-HhHHHHHH
Q 027446 193 PPLSDKDQEEKAR-KSEFVQGL 213 (223)
Q Consensus 193 ~~ls~ed~eEk~~-R~eFVQ~L 213 (223)
..|+++|++|+.+ |-++++.+
T Consensus 20 ~gLT~eEk~EQ~~LR~eYl~~f 41 (60)
T 3bhp_A 20 GVITEEEKAEQQKLRQEYLKGF 41 (60)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHH
Confidence 4699999999855 66666543
No 361
>3ip4_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_B 2dqn_B* 2g5h_B 2g5i_B* 2f2a_B
Probab=25.91 E-value=27 Score=33.16 Aligned_cols=17 Identities=12% Similarity=0.028 Sum_probs=14.4
Q ss_pred CCCCCccccCCccCccc
Q 027446 68 PIEAKNGVCPVCAKRVG 84 (223)
Q Consensus 68 ~~e~k~~VCPVCa~~v~ 84 (223)
-.+++.-|||||...||
T Consensus 30 g~~PNt~v~pv~lg~PG 46 (483)
T 3ip4_B 30 GAEPNSNTNVIDLAYPG 46 (483)
T ss_dssp CSSTTCSCCTTTTTCTT
T ss_pred CCCCccCcCchhccCCC
Confidence 34677889999999988
No 362
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=25.26 E-value=18 Score=25.25 Aligned_cols=43 Identities=28% Similarity=0.547 Sum_probs=26.5
Q ss_pred cceeeCCCCCcc-chhhhh-hccc-cccCCCCCCccccCCccCccch
Q 027446 42 NAMFLCPFCAED-FDIVGL-CCHI-DEDHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 42 ~~~F~CPfC~~~-~d~~~L-~~H~-~~eH~~e~k~~VCPVCa~~v~~ 85 (223)
.....|+.|... .+...| |-|. -=..+... -..||+|...+..
T Consensus 16 ~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~-~~~CP~Cr~~i~~ 61 (79)
T 2yho_A 16 KEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQ-LQSCPVCRSRVEH 61 (79)
T ss_dssp HHHTBCTTTSSSBCCEEEETTCBCCBCHHHHTT-CSBCTTTCCBCCE
T ss_pred CCCCEeEEeCcccCcEEEECCCCHHHHHHHHHh-cCcCCCCCchhhC
Confidence 445689999886 555544 5554 21222222 2389999998775
No 363
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=25.18 E-value=21 Score=21.32 Aligned_cols=22 Identities=27% Similarity=0.546 Sum_probs=15.4
Q ss_pred eeeCC--CCCccc-hhhhhhccccc
Q 027446 44 MFLCP--FCAEDF-DIVGLCCHIDE 65 (223)
Q Consensus 44 ~F~CP--fC~~~~-d~~~L~~H~~~ 65 (223)
.|.|+ .|+..| ....|..|...
T Consensus 18 ~~~C~~~~C~k~F~~~~~L~~H~~~ 42 (47)
T 1ncs_A 18 TFECLFPGCTKTFKRRYNIRSHIQT 42 (47)
T ss_dssp EEECCCTTCCCEECSSSSHHHHHHH
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH
Confidence 59996 599984 44667777653
No 364
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=24.61 E-value=27 Score=23.11 Aligned_cols=15 Identities=13% Similarity=0.516 Sum_probs=10.4
Q ss_pred ceeeCCCCCccchhh
Q 027446 43 AMFLCPFCAEDFDIV 57 (223)
Q Consensus 43 ~~F~CPfC~~~~d~~ 57 (223)
..-.|++|++.+-..
T Consensus 17 ~~~~C~~CG~~i~~~ 31 (49)
T 2l8e_A 17 NLLKCEYCGKYAPAE 31 (49)
T ss_dssp SEEECTTTCCEEEGG
T ss_pred CCCcChhccCccccc
Confidence 345699999976543
No 365
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=23.78 E-value=20 Score=31.93 Aligned_cols=39 Identities=23% Similarity=0.518 Sum_probs=21.9
Q ss_pred cceeeCCCCCcc--chh-------hh---h-hccccccCCCCCCccccCCccCc
Q 027446 42 NAMFLCPFCAED--FDI-------VG---L-CCHIDEDHPIEAKNGVCPVCAKR 82 (223)
Q Consensus 42 ~~~F~CPfC~~~--~d~-------~~---L-~~H~~~eH~~e~k~~VCPVCa~~ 82 (223)
+..=.||.||.. +-+ .+ | |..|..+ .....+.||-|-..
T Consensus 180 ~~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~--W~~~R~~C~~Cg~~ 231 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACE--WHYVRIKCSHCEES 231 (309)
T ss_dssp TTCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCE--EECCTTSCSSSCCC
T ss_pred ccCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCE--EeecCcCCcCCCCC
Confidence 556689999974 221 12 1 1233322 23345789999886
No 366
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=23.47 E-value=36 Score=30.12 Aligned_cols=43 Identities=26% Similarity=0.509 Sum_probs=28.6
Q ss_pred CccceeeCCCCCccchhhhhhccccccCCCCCCccccCCccCccchhhhhh
Q 027446 40 DLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSH 90 (223)
Q Consensus 40 d~~~~F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~~v~~d~i~H 90 (223)
|......||.|+..- . .+..+ +.....||.-|..-+..+.|.+
T Consensus 17 ~~~~~~~Cp~Cg~~~--~----~iv~D--~~~G~~vC~~CG~Vl~e~~id~ 59 (345)
T 3k7a_M 17 NLNIVLTCPECKVYP--P----KIVER--FSEGDVVCALCGLVLSDKLVDT 59 (345)
T ss_dssp CCCCCCCCSTTCCSC--C----CCCCC--SSSCSCCCSSSCCCCCCCCCCT
T ss_pred cccCCCcCcCCCCCC--C----ceEEE--CCCCCEecCCCCeEcccccccC
Confidence 555677899998741 0 11112 3466789999999888766654
No 367
>1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone, chaperone; 2.70A {Escherichia coli} SCOP: d.193.1.1 PDB: 1xjh_A
Probab=23.00 E-value=18 Score=31.95 Aligned_cols=13 Identities=23% Similarity=0.774 Sum_probs=4.8
Q ss_pred CccceeeCCCCCcc
Q 027446 40 DLNAMFLCPFCAED 53 (223)
Q Consensus 40 d~~~~F~CPfC~~~ 53 (223)
...-.|.|+ |.++
T Consensus 223 ~~~v~f~C~-CSre 235 (292)
T 1i7f_A 223 PQDVEFKCT-CSRE 235 (292)
T ss_dssp CCCCCCCCC-----
T ss_pred CCCCCeeCC-CCHH
Confidence 344456665 5543
No 368
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=22.83 E-value=22 Score=25.85 Aligned_cols=9 Identities=44% Similarity=1.128 Sum_probs=7.2
Q ss_pred cccCCccCc
Q 027446 74 GVCPVCAKR 82 (223)
Q Consensus 74 ~VCPVCa~~ 82 (223)
-|||||...
T Consensus 18 WVCpICsfs 26 (76)
T 2j9u_B 18 WVCPICMVS 26 (76)
T ss_dssp EECTTTCCE
T ss_pred eECcccccc
Confidence 489999864
No 369
>3kfu_F Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=21.94 E-value=36 Score=32.26 Aligned_cols=17 Identities=35% Similarity=0.700 Sum_probs=14.4
Q ss_pred CCCCCccccCCccCccc
Q 027446 68 PIEAKNGVCPVCAKRVG 84 (223)
Q Consensus 68 ~~e~k~~VCPVCa~~v~ 84 (223)
-.+++.-|||||...||
T Consensus 30 g~~PNt~vcpvclglPG 46 (466)
T 3kfu_F 30 GAEPNTHTCPVCLGLPG 46 (466)
T ss_dssp SCCTTSSCCTTTTTCTT
T ss_pred CCCCCCccCccccCCCC
Confidence 45677789999999988
No 370
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.90 E-value=23 Score=24.06 Aligned_cols=44 Identities=27% Similarity=0.527 Sum_probs=25.6
Q ss_pred ccceeeCCCCCccc-hhhhh-hccc-cccCCCCCCccccCCccCccch
Q 027446 41 LNAMFLCPFCAEDF-DIVGL-CCHI-DEDHPIEAKNGVCPVCAKRVGT 85 (223)
Q Consensus 41 ~~~~F~CPfC~~~~-d~~~L-~~H~-~~eH~~e~k~~VCPVCa~~v~~ 85 (223)
....+.||.|...+ +...| |-|. -=..+.. +...||+|...+..
T Consensus 22 ~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~-~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 22 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAE-AVDKCPMCYTVITF 68 (75)
T ss_dssp HHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHHH-HCSBCTTTCCBCCC
T ss_pred CCCCCCCCcCCCCCCCEEEecCCCHHHHHHHhh-CCCCCccCCceecC
Confidence 35578999999874 43332 4443 1111111 23679999987754
No 371
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.86 E-value=29 Score=24.45 Aligned_cols=35 Identities=14% Similarity=0.296 Sum_probs=22.6
Q ss_pred eeeCCCCCccc-hhhhhhccccccCCCCCCccccCCcc
Q 027446 44 MFLCPFCAEDF-DIVGLCCHIDEDHPIEAKNGVCPVCA 80 (223)
Q Consensus 44 ~F~CPfC~~~~-d~~~L~~H~~~eH~~e~k~~VCPVCa 80 (223)
.|.|+.|+..| ....|..|+.. |.. .++..|..|.
T Consensus 25 py~C~~C~k~F~~~~~L~~H~~~-Ht~-ekp~~C~~~~ 60 (88)
T 1x6f_A 25 TYQCKHCDSKLQSTAELTSHLNI-HNE-EFQKRAKRQE 60 (88)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHH-HHHHHCCCCS
T ss_pred CCcCCCCCCEeCCHHHHHHHHHH-hCC-CCCcccchhh
Confidence 59999999984 55667777654 432 2344565554
No 372
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=21.41 E-value=42 Score=34.59 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=21.1
Q ss_pred ceeeCCCCC-ccchhhhhhccccccCCCCCCccccCCccC
Q 027446 43 AMFLCPFCA-EDFDIVGLCCHIDEDHPIEAKNGVCPVCAK 81 (223)
Q Consensus 43 ~~F~CPfC~-~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~ 81 (223)
..|.||.|+ ..|...+= .. =.|.+-.+.||.|.-
T Consensus 274 ~~~~c~~~g~~~~~~~~p--~~---FSfN~p~GaCp~C~G 308 (993)
T 2ygr_A 274 EKLACPNGHALAVDDLEP--RS---FSFNSPYGACPDCSG 308 (993)
T ss_dssp SSCBCTTCCCCSCSCCCG--GG---GCTTSTTTBCTTTTT
T ss_pred ccccCCCCCCcccCCCCh--hh---cCcCCCCCCCCCCcC
Confidence 468999999 55543211 11 124455699999984
No 373
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=21.19 E-value=9.5 Score=29.03 Aligned_cols=10 Identities=40% Similarity=1.112 Sum_probs=8.2
Q ss_pred ceeeCCCCCc
Q 027446 43 AMFLCPFCAE 52 (223)
Q Consensus 43 ~~F~CPfC~~ 52 (223)
..|.||||..
T Consensus 29 ~dy~Cp~C~~ 38 (184)
T 4dvc_A 29 FSFYCPHCNT 38 (184)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCCHhHHH
Confidence 3699999975
No 374
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.37 E-value=84 Score=22.00 Aligned_cols=12 Identities=17% Similarity=0.481 Sum_probs=9.1
Q ss_pred ccccCCccCccc
Q 027446 73 NGVCPVCAKRVG 84 (223)
Q Consensus 73 ~~VCPVCa~~v~ 84 (223)
+..||+|...+.
T Consensus 58 ~~~CplCr~~~~ 69 (80)
T 2d8s_A 58 TRCCELCKYEFI 69 (80)
T ss_dssp CSBCSSSCCBCC
T ss_pred CCCCCCCCCeee
Confidence 468999988653
No 375
>1ee8_A MUTM (FPG) protein; beta sandwich, zinc finger, helix two-turns helix, riken STR genomics/proteomics initiative, RSGI, structural genomics; 1.90A {Thermus thermophilus} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=20.25 E-value=28 Score=30.11 Aligned_cols=28 Identities=21% Similarity=0.599 Sum_probs=18.8
Q ss_pred eeCCCCCccchhhhhhccccccCCCCCCccccCCccC
Q 027446 45 FLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAK 81 (223)
Q Consensus 45 F~CPfC~~~~d~~~L~~H~~~eH~~e~k~~VCPVCa~ 81 (223)
-+||-|+..+....+ .......||.|-.
T Consensus 236 ~pC~~CG~~I~~~~~---------~gR~t~~CP~CQ~ 263 (266)
T 1ee8_A 236 LPCPACGRPVERRVV---------AGRGTHFCPTCQG 263 (266)
T ss_dssp SBCTTTCCBCEEEES---------SSCEEEECTTTTT
T ss_pred CCCCCCCCEeeEEEE---------CCCceEECCCCCC
Confidence 579999987654444 2344568999964
Done!