BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027451
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31 OS=Homo sapiens GN=BCAP31
PE=1 SV=3
Length = 246
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 143 EIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQN 202
E+K LE++ +LK L+ L+ EL + ++ AE +A+RKQSEG EYDRLLEE+
Sbjct: 174 EVK-LEEENRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAK 232
Query: 203 LR 204
L+
Sbjct: 233 LQ 234
>sp|Q5R8H3|BAP31_PONAB B-cell receptor-associated protein 31 OS=Pongo abelii GN=BCAP31
PE=2 SV=3
Length = 246
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 143 EIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQN 202
E+K LE++ +LK L+ L+ EL + ++ AE +A+RKQSEG EYDRLLEE+
Sbjct: 174 EVK-LEEENRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAK 232
Query: 203 LR 204
L+
Sbjct: 233 LQ 234
>sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31 OS=Mus musculus GN=Bcap31
PE=1 SV=4
Length = 245
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 153 TLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLR 204
+LK L+ L+ EL + K+ AE A+A++KQSEG EYDRLLEE+ L+
Sbjct: 182 SLKNDLRKLKDELASTKKKLEKAENEALAMQKQSEGLTKEYDRLLEEHAKLQ 233
>sp|Q62240|KDM5D_MOUSE Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2
Length = 1548
Score = 38.5 bits (88), Expect = 0.035, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSRG---FEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L +++L+IR ++ + N+ + EDG+ S EE++ALE + + +
Sbjct: 750 YTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALESEARDRRFPNSE 809
Query: 161 LESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQSLDWRLSHSGSK 220
L L+ EA A + + L SE L L E Q L Q+ +L +
Sbjct: 810 LLQRLKKCLTEAEACISQVLGLISNSEDRLQTPQITLTELQLLLKQMGTLPCTMHQIDEV 869
Query: 221 KD 222
KD
Sbjct: 870 KD 871
>sp|O15021|MAST4_HUMAN Microtubule-associated serine/threonine-protein kinase 4 OS=Homo
sapiens GN=MAST4 PE=1 SV=3
Length = 2626
Score = 38.1 bits (87), Expect = 0.048, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 89 HLLEATLMGASLFLAFMIDRLHHYIRELRIRRKTMEAIKNQSRGFEDGKAASSEEIKALE 148
+LLEA A D + I +L + + +E + + ++ G A + E +++
Sbjct: 498 YLLEAAEGHAKEGQGIKTDIPRYIISQLGLNKDPLEEMAHLGN-YDSGTAETPETDESVS 556
Query: 149 DQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQ 208
+LKL+ K ES+ ET +N A +R + F ++ ++N LRNQ+Q
Sbjct: 557 SSNASLKLRRKPRESDFETIKLISNGAYGAVYFVRHKESRQRFAMKKINKQNLILRNQIQ 616
>sp|Q30DN6|KDM5D_CANFA Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2
SV=1
Length = 1545
Score = 38.1 bits (87), Expect = 0.051, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L+IR ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 744 YTLDELPAMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSE 803
Query: 161 LESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQSL 210
L L EA A + + L E + L E + L Q+ SL
Sbjct: 804 LLQRLRNCMHEAEACVSQVLGLVSGQEARIQTSPLTLTELRVLLEQMSSL 853
>sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2
Length = 1560
Score = 37.4 bits (85), Expect = 0.081, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L++R ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 751 YTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFPNSE 810
Query: 161 LESELETKSKEANAAETNAVALRKQSEG 188
L +L+ EA A + A+ L E
Sbjct: 811 LLQQLKNCLSEAEACVSRALGLVSGQEA 838
>sp|Q54K74|YETL_DICDI Endoplasmic reticulum transmembrane protein YET-like
OS=Dictyostelium discoideum GN=DDB_G0287543 PE=3 SV=2
Length = 206
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 4 LLFTVMFSEMALIMVLLFKTP----LRKLLIMSLDRVKRGR-GPVVVKTVAGTVLVMLIS 58
L+F V+ E ++ F P LRK + LD++ G+ + +K +A V+++
Sbjct: 7 LVFLVLLVE--IVFCTFFMLPVSMHLRKNVYNKLDKLFGGQNAKIFLKVLALLVIIVFCD 64
Query: 59 SVYNIMMIQKRWIDDE--GAVVNPTDQVL-LANHLLEATLMGASLFLAFMIDRLHHYIRE 115
S+ N I K+ E GA + ++ + + + + G L+L F+I R I +
Sbjct: 65 SIVNSYNINKKLHTPELTGAKFDRQNEYTRMFRYQRNSYICGFCLYLFFLIYRSQGIISQ 124
Query: 116 LRIRRKTMEAIKNQSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLES-ELETKSKEANA 174
L + AI+ Q++ + ++ L + LK ++KDL+ E E K+ ++ A
Sbjct: 125 LSNVEASKTAIEKQTKN-------NLNTVETLLSENEKLKTEIKDLKKMEKEHKAMKSQA 177
Query: 175 AETNAVALRKQSEGFLFEYDRLL 197
T L+ Q EY++LL
Sbjct: 178 ENTTKEYLKLQE-----EYNQLL 195
>sp|A1YVX4|KDM5C_PIG Lysine-specific demethylase 5C OS=Sus scrofa GN=KDM5C PE=2 SV=1
Length = 1516
Score = 36.6 bits (83), Expect = 0.13, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L++R ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 710 YTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFPNSE 769
Query: 161 LESELETKSKEANAAETNAVALRKQSEG 188
L L+ EA A + A+ L E
Sbjct: 770 LLQRLKNCLSEAEACVSRALGLVSGQEA 797
>sp|Q38JA7|KDM5C_CANFA Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2
SV=1
Length = 1556
Score = 36.6 bits (83), Expect = 0.14, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L++R ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 751 YTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFPNSE 810
Query: 161 LESELETKSKEANAAETNAVALRKQSEG 188
L L+ EA A + A+ L E
Sbjct: 811 LLQRLKNCLSEAEACVSRALGLVSGQEA 838
>sp|P41230|KDM5C_MOUSE Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4
Length = 1554
Score = 36.2 bits (82), Expect = 0.17, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L++R ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 751 YTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFPNSE 810
Query: 161 LESELETKSKEANAAETNAVALRKQSEG 188
L L+ EA A + A+ L E
Sbjct: 811 LLQRLKNCLSEAEACVSRALGLVSGQEA 838
>sp|Q811L6|MAST4_MOUSE Microtubule-associated serine/threonine-protein kinase 4 OS=Mus
musculus GN=Mast4 PE=1 SV=3
Length = 2618
Score = 36.2 bits (82), Expect = 0.18, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 89 HLLEATLMGASLFLAFMIDRLHHYIRELRIRRKTMEAIKNQSRGFEDGKAASSEEIKALE 148
+LLEA A D + I +L + + +E + Q ++ A + E +++
Sbjct: 493 YLLEAAEGHAKEGQGIKTDIPRYIISQLGLNKDPLEEMA-QLGNYDSRTAETPEMDESVS 551
Query: 149 DQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQ 208
T+L+L+ K ES+ ET +N A +R + F ++ ++N LRNQ+Q
Sbjct: 552 SSNTSLRLRRKPRESDFETIKLISNGAYGAVYFVRHKESRQRFAMKKINKQNLILRNQIQ 611
>sp|P39083|RGA1_YEAST Rho-type GTPase-activating protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RGA1 PE=1 SV=1
Length = 1007
Score = 35.4 bits (80), Expect = 0.29, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 142 EEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQ 201
+EI E + LK+ LK+LES+ E KE ++ ALR+ E + E ++L ++
Sbjct: 603 KEIVTAEHYLKQLKINLKELESQREELMKEITEMKSMKEALRRHIESYNSEKNKLYLDSN 662
Query: 202 NLRN 205
L N
Sbjct: 663 ELSN 666
>sp|Q5XUN4|KDM5D_PANTR Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2
SV=1
Length = 1535
Score = 35.4 bits (80), Expect = 0.34, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L+IR ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 741 YTLDELPTMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSE 800
Query: 161 LESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQSLDWRLSHSGSK 220
L L+ E A + L + L E + L Q+ SL + G
Sbjct: 801 LLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQLTLTELRVLLEQMGSLPCAMHQIGDV 860
Query: 221 KD 222
KD
Sbjct: 861 KD 862
>sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2
Length = 1539
Score = 35.4 bits (80), Expect = 0.35, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 3/122 (2%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSR---GFEDGKAASSEEIKALEDQMTTLKLKLKD 160
+ +D L + +L+IR ++ + N+ R EDG+ S EE++ALE + + +
Sbjct: 741 YTLDELPTMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSE 800
Query: 161 LESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQSLDWRLSHSGSK 220
L L+ E A + L + L E + L Q+ SL + G
Sbjct: 801 LLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQLTLTELRVLLEQMGSLPCAMHQIGDV 860
Query: 221 KD 222
KD
Sbjct: 861 KD 862
>sp|Q05000|MYS_PODCA Myosin heavy chain (Fragment) OS=Podocoryne carnea PE=2 SV=1
Length = 692
Score = 35.0 bits (79), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 145 KALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLR 204
K ++ Q+ KLK +++++L+ ++A T + +R SE + +YD L +EN+ L
Sbjct: 186 KKVDQQINEWKLKCDEIQADLDKAQRDARGYSTELLKVRTASEDTIEKYDALKKENRALS 245
Query: 205 NQLQSLDWRLSHSG 218
+LQS+ +LS G
Sbjct: 246 AELQSVTEQLSDGG 259
>sp|Q336R3|BRE1B_ORYSJ E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp.
japonica GN=BRE1B PE=2 SV=1
Length = 844
Score = 34.3 bits (77), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSRGF---EDGKAASSEEIKALEDQMTTLKLKLKD 160
+ D+LHH E+ R +E ++N+ E+ A +E + A++ +TT K K++D
Sbjct: 326 ILSDQLHHLNAEIERYRGLVEVLQNEKDQLMQKEEEMLAKAESVDAVQQSITTYKAKIED 385
Query: 161 LESELETKSKEANAAETNA 179
LE E++ E N E A
Sbjct: 386 LEHEIQKLMAEKNDLEIKA 404
>sp|A2ZAC2|BRE1B_ORYSI E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp.
indica GN=BRE1B PE=3 SV=2
Length = 844
Score = 34.3 bits (77), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 104 FMIDRLHHYIRELRIRRKTMEAIKNQSRGF---EDGKAASSEEIKALEDQMTTLKLKLKD 160
+ D+LHH E+ R +E ++N+ E+ A +E + A++ +TT K K++D
Sbjct: 326 ILSDQLHHLNAEIERYRGLVEVLQNEKDQLMQKEEEMLAKAESVDAVQQSITTYKAKIED 385
Query: 161 LESELETKSKEANAAETNA 179
LE E++ E N E A
Sbjct: 386 LEHEIQKLMAEKNDLEIKA 404
>sp|O14290|YF14_SCHPO Uncharacterized protein C9E9.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC9E9.04 PE=4 SV=1
Length = 188
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 4 LLFTVMFSEMALIMVLLFKTPL---RKLLIMSLDRVKRGRGPVVVKTVAGTVLVMLISSV 60
++F ++ E+ ++L PL R +L + GR V+K +L++ SV
Sbjct: 7 IVFMLLMVEIVSFVILSLPLPLKVRRAILNAISNSPFAGRVKHVLKITIICILILFADSV 66
Query: 61 YNIMMIQKRWIDDEGAVVNPT-----------DQVLLANHLLEATLMGASLFLAFMIDRL 109
++ + K + + A+ P+ Q +L L G++LFL+ +++R
Sbjct: 67 RRVVRVTKEY---DLAIAAPSTTESARSGYKASQFYAQRNLY---LCGSALFLSLVVNRY 120
Query: 110 HHYIRELRIRRKTMEAIKNQSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKS 169
+ + + + M+A++ Q AS+ KA+E+ + TL+ KL+ + E ET +
Sbjct: 121 YLALEAMIAAQDKMQALQTQVE-------ASTNNAKAVEE-LETLRTKLETRDKEYETLA 172
Query: 170 KEANAAETNAVALRK 184
E AA T V +K
Sbjct: 173 -EKYAAVTKTVEKKK 186
>sp|Q9ERA5|SMC4_MICAR Structural maintenance of chromosomes protein 4 (Fragment)
OS=Microtus arvalis GN=SMC4 PE=2 SV=1
Length = 1243
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 125 AIKNQSRGF---EDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVA 181
AIK R +D + +EIK E + LK +LK +E + E K+ NAAE +
Sbjct: 881 AIKTADRNLIKAQDSVVRTEKEIKDTEKETNDLKAELKAIEDKAEEVIKKTNAAEESLPE 940
Query: 182 LRKQSEGFLFEYDRLLEENQN--------LRNQLQSLDWRLSHSGSK 220
++K+ L E ++++EN++ ++ +L+ +D ++ SK
Sbjct: 941 IQKEHRNLLQEL-KVIQENEHALQKDALSIKLKLEQIDGHIAEHNSK 986
>sp|Q8CG47|SMC4_MOUSE Structural maintenance of chromosomes protein 4 OS=Mus musculus
GN=Smc4 PE=1 SV=1
Length = 1286
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 125 AIKNQSRGF---EDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVA 181
AIK R +D + +EIK E ++ LK +LK++E + E AET+
Sbjct: 924 AIKTADRNLKKAQDSVCRTEKEIKDTEKEINDLKTELKNIEDKAEEVINNTKTAETSLPE 983
Query: 182 LRKQSEGFLFEYDRLLEENQN--------LRNQLQSLDWRLSHSGSK 220
++K+ L E ++++EN++ ++ +L+ +D +S SK
Sbjct: 984 IQKEHRNLLQEL-KVIQENEHALQKDALSIKLKLEQIDGHISEHNSK 1029
>sp|Q0VBY1|ODF2L_BOVIN Outer dense fiber protein 2-like OS=Bos taurus GN=ODF2L PE=2 SV=1
Length = 548
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 132 GFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEGFLF 191
E+G+ SEEI+ + + L++K+ DLE+EL K++E N + + E L
Sbjct: 457 ALEEGRQKVSEEIEKMSSRERALQVKIVDLENELRKKNEEQNQLVCKMNSKAQHQEVCLK 516
Query: 192 EYDRLLE--ENQN--LRNQLQSL 210
E LE ENQN ++N LQ L
Sbjct: 517 EIQHSLEKSENQNESIKNYLQFL 539
>sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 OS=Mus musculus GN=Bcap29
PE=1 SV=1
Length = 240
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 160 DLESELETKSKEANAAETNAVALRKQSEGFLFEYDRLLEENQNLRNQLQ 208
+L++EL+ S A+ + + ++ QSE EYDRLL+E+ L+N+L+
Sbjct: 185 NLKTELKKASDALLKAQNDVMTMKIQSERLSKEYDRLLKEHSELQNRLE 233
>sp|Q5R9U7|BAP29_PONAB B-cell receptor-associated protein 29 OS=Pongo abelii GN=BCAP29
PE=2 SV=1
Length = 241
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 129 QSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEG 188
+S G ++ +E K +EDQ + L++EL S + A+ + + ++ QSE
Sbjct: 163 KSHGKDEECVLEAENKKLVEDQ--------QKLKTELRKTSDALSKAQNDVMEMKMQSER 214
Query: 189 FLFEYDRLLEENQNLRNQLQ 208
EYD+LL+E+ L+++L+
Sbjct: 215 LSKEYDQLLKEHSELQDRLE 234
>sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29 OS=Homo sapiens GN=BCAP29
PE=1 SV=2
Length = 241
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 129 QSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEANAAETNAVALRKQSEG 188
+S G ++ +E K +EDQ + L++EL S + A+ + + ++ QSE
Sbjct: 163 KSHGKDEECVLEAENKKLVEDQ--------EKLKTELRKTSDALSKAQNDVMEMKMQSER 214
Query: 189 FLFEYDRLLEENQNLRNQLQ 208
EYD+LL+E+ L+++L+
Sbjct: 215 LSKEYDQLLKEHSELQDRLE 234
>sp|Q96ST8|CEP89_HUMAN Centrosomal protein of 89 kDa OS=Homo sapiens GN=CEP89 PE=1 SV=3
Length = 783
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 114 RELRIRRKTMEAIKNQSRGFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEAN 173
R I R+ EA+K ++ + + + E+ ++ M L+LKLK +E E + K KEA
Sbjct: 231 RYTEITREKFEALKEENMDLNNMNQSLTLELNTMKQAMKELQLKLKGMEKE-KRKLKEAE 289
Query: 174 AAETNAVA------LRKQSEGFLFEYDRL 196
A + VA LRKQ++ + E D L
Sbjct: 290 KASSQEVAAPELLYLRKQAQELVDENDGL 318
>sp|Q9ULJ1|ODF2L_HUMAN Outer dense fiber protein 2-like OS=Homo sapiens GN=ODF2L PE=2 SV=2
Length = 636
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 132 GFEDGKAASSEEIKALEDQMTTLKLKLKDLESELETKSKEAN 173
E+G+ +EEI+ + + + L++K+ DLE+EL K++E N
Sbjct: 582 ALEEGRQKVAEEIEKMSSRESALQIKILDLETELRKKNEEQN 623
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,449,382
Number of Sequences: 539616
Number of extensions: 2477000
Number of successful extensions: 16701
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 385
Number of HSP's that attempted gapping in prelim test: 14680
Number of HSP's gapped (non-prelim): 2298
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)