BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027452
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2
SV=1
Length = 329
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 119/231 (51%), Gaps = 23/231 (9%)
Query: 11 GGVPHCFPQFGP-GPMQQHGFARNMDWSI-LDSENVEGNPVIT----LELKDGPYSRAMW 64
GG+P C PQFG G ++QHGFARN WSI D + NP I L L+ +W
Sbjct: 83 GGIPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILRPAEEDLKIW 142
Query: 65 DFSFQALFKVILNTK---SISTELTITNTDNKPFSFSSALHTYFRAS-VTGASVKGLKGC 120
SF+ +V L S+++ + TNTD +PFS++ A HTYF S ++ V+GL+
Sbjct: 143 PHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETM 202
Query: 121 KTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAPS-VVHLDNGLGDTITIRNTNWSDA 179
L+ + K E+ D + F VD +YL APS + +D+ T + DA
Sbjct: 203 DYLD---NLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDA 259
Query: 180 VLWNP------HMQ--MEACYKDFVCVENAKIGK-VQLEPEQSWTAKQHLS 221
V+WNP MQ +A YK+ +CVE A + K + L+P + W + LS
Sbjct: 260 VVWNPWDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALS 310
>sp|P39173|YEAD_ECOLI Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli
(strain K12) GN=yeaD PE=1 SV=2
Length = 294
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 96/213 (45%), Gaps = 28/213 (13%)
Query: 11 GGVPHCFPQFGPGPMQ---QHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMW--D 65
GGVP C+P FGP Q HGFARN+ W++ +T EL ++ W D
Sbjct: 75 GGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGVALTFELTQSEETKKFWPHD 134
Query: 66 FSFQALFKVILNTKSISTELTITNTDNKPFSFSSALHTYFRAS-VTGASVKGLKGCKTLN 124
F+ A F+V K+ +L + F +SALHTYF + SV GL G + ++
Sbjct: 135 FTLLAHFRV---GKTCEIDL----ESHGEFETTSALHTYFNVGDIAKVSVSGL-GDRFID 186
Query: 125 KDPDPKNPMEGKEERDRVTFPGFVDCIYLDAP--SVVHLDNGLGDTITIRNTNWSDAVLW 182
K D K E TFP D +YL+ SV++ D L I + + + + V W
Sbjct: 187 KVNDAK---ENVLTDGIQTFPDRTDRVYLNPQDCSVIN-DEALNRIIAVGHQHHLNVVGW 242
Query: 183 NPHMQMEAC--------YKDFVCVENAKIGKVQ 207
NP + YK FVCVE A + Q
Sbjct: 243 NPGPALSISMGDMPDDGYKTFVCVETAYASETQ 275
>sp|Q03161|YMY9_YEAST Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR099C PE=1 SV=1
Length = 297
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 96/238 (40%), Gaps = 37/238 (15%)
Query: 11 GGVPHCFPQFGP-------GPMQQHGFARNMDWSILDSENVEGNPVITLELK---DGPYS 60
GG+P FP FG + QHG ARN W L + E P + LK P
Sbjct: 58 GGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEFL-GQTKENPPTVQFGLKPEIANPEL 116
Query: 61 RAMWDFSFQALFKVILNTKSISTELTITNTDN-KPFSFSSALHTYFRAS-VTGASVKGLK 118
+W + + V L + + T + + NT + K F+ HTYFR + G V L
Sbjct: 117 TKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLA 176
Query: 119 GCKT----LNKDPDPKNPMEGKEERDRVTFPGFVDCIY--LDAPSVVHLDNGLGDTITIR 172
G K L + K+P+ VTF D IY + A + + + T++
Sbjct: 177 GMKLYDQLLKESYVDKHPV--------VTFNQETDVIYQNVSAERAIQIVDKGVQIHTLK 228
Query: 173 NTNWSDAVLWNPHMQMEACYKDF---------VCVENAKIGK-VQLEPEQSWTAKQHL 220
N D V+WNP ++ DF +C+E + + L P + W A Q L
Sbjct: 229 RYNLPDTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLL 286
>sp|P44160|Y1317_HAEIN Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1317
PE=3 SV=1
Length = 271
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 55/215 (25%)
Query: 11 GGVPHCFPQFGPGPMQQHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMWDFSFQA 70
GGVP C+P FG HG AR W + Y ++ +
Sbjct: 72 GGVPICYPWFGGVKQPAHGTARIRLWQL------------------SHYYISVHKVRLE- 112
Query: 71 LFKVILNTKSISTELTITNTDNKPFSFS--------SALHTYFR-ASVTGASVKGL-KGC 120
F++ + I ++++ TD +F+ +ALHTYF + V+GL + C
Sbjct: 113 -FELFSDLNIIEAKVSMVFTDKCHLTFTHYGEESAQAALHTYFNIGDINQVEVQGLPETC 171
Query: 121 -KTLNKD----PDPKNPMEGKEERDRVTFPGFVDCIYLDAPSVVH--LDNGLGDTITIRN 173
+LN+ P P++ E VDCIY A ++ + LD TI + +
Sbjct: 172 FNSLNQQQENVPSPRHISEN------------VDCIY-SAENMQNQILDKSFNRTIALHH 218
Query: 174 TNWSDAVLWNP-HMQM----EACYKDFVCVENAKI 203
N S VLWNP H + E Y+ +C+E A+I
Sbjct: 219 HNASQFVLWNPWHKKTSGMSETGYQKMLCLETARI 253
>sp|P23496|LACXP_LACLL Protein LacX, plasmid OS=Lactococcus lactis subsp. lactis GN=lacX
PE=2 SV=1
Length = 299
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 20 FGPGPMQQHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMWDFSFQALFKVI--LN 77
F G +++HGF R ++++ E V N V T +K P + + ++ +Q +V+ LN
Sbjct: 69 FFTGLIRRHGFVRKEEFTL---EEVNENSV-TFSIK--PNAEMLDNYLYQFELRVVYTLN 122
Query: 78 TKSISTELTITNTDNK 93
KSI TE +TN + +
Sbjct: 123 GKSIRTEFQVTNLETE 138
>sp|P42096|LACXC_LACLL Protein LacX, chromosomal OS=Lactococcus lactis subsp. lactis
GN=lacX PE=4 SV=1
Length = 299
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 20 FGPGPMQQHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMWDFSFQALFKVI--LN 77
F G +++HGF R ++++ E V N V T +K P + + ++ +Q +V+ LN
Sbjct: 69 FFTGLIRRHGFVRKEEFTL---EEVNENSV-TFSIK--PNAEMLDNYLYQFELRVVYTLN 122
Query: 78 TKSISTELTITNTDNK 93
KSI TE +TN + +
Sbjct: 123 GKSIRTEFQVTNLETE 138
>sp|P41743|KPCI_HUMAN Protein kinase C iota type OS=Homo sapiens GN=PRKCI PE=1 SV=2
Length = 596
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 16 CFPQFGPGPMQQHGFARNMDWSILDSENV 44
C PQ G +Q H F RN+DW +++ + V
Sbjct: 507 CHPQTGFADIQGHPFFRNVDWDMMEQKQV 535
>sp|Q5R4K9|KPCI_PONAB Protein kinase C iota type OS=Pongo abelii GN=PRKCI PE=2 SV=2
Length = 596
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 16 CFPQFGPGPMQQHGFARNMDWSILDSENV 44
C PQ G +Q H F RN+DW +++ + V
Sbjct: 507 CHPQTGFADIQGHPFFRNVDWDMMEQKQV 535
>sp|Q62074|KPCI_MOUSE Protein kinase C iota type OS=Mus musculus GN=Prkci PE=1 SV=3
Length = 595
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 16 CFPQFGPGPMQQHGFARNMDWSILDSENV 44
C PQ G +Q H F RN+DW +++ + V
Sbjct: 506 CHPQTGFADIQGHPFFRNVDWDMMEQKQV 534
>sp|F1M7Y5|KPCI_RAT Protein kinase C iota type OS=Rattus norvegicus GN=Prkci PE=1 SV=1
Length = 596
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 16 CFPQFGPGPMQQHGFARNMDWSILDSENV 44
C PQ G +Q H F RN+DW +++ + V
Sbjct: 507 CHPQTGFADIQGHPFFRNVDWDMMEQKQV 535
>sp|Q04859|MAK_MOUSE Serine/threonine-protein kinase MAK OS=Mus musculus GN=Mak PE=1
SV=2
Length = 622
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 81 ISTELTITNTDNKPFSFSSALHTYFR-ASVTGASVKGLKGCKTLNKDPDPKNPMEGKEER 139
+ TE+ + +P + + H YF+ V G+S L +TL+K P P ER
Sbjct: 260 LMTEMLNWDPKKRPTASQALKHPYFQVGQVLGSSAHHLDTKQTLHKQLQPLEPKPSSSER 319
Query: 140 DRVTFPGFVD 149
D P +D
Sbjct: 320 DPKPLPNILD 329
>sp|Q90XF2|KPCI_DANRE Protein kinase C iota type OS=Danio rerio GN=prkci PE=2 SV=2
Length = 588
Score = 30.4 bits (67), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 5 YLHWDSGGVPHCFPQFGPGPMQQHGFARNMDWSILDSENV 44
+L+ +S C PQ G + H F RN+DW +++ + V
Sbjct: 488 FLNKESKERLGCHPQTGFADIMAHPFFRNVDWDLMEQKQV 527
>sp|P33003|I7_VAR67 Core protease I7 OS=Variola virus (isolate Human/India/Ind3/1967)
GN=I7L PE=2 SV=1
Length = 423
Score = 30.4 bits (67), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 173 NTNWSDAVLWNPHMQMEACYKDFVCVENAKIGKVQLEPEQ 212
NTN +VL N + ++ ++ F C+ AKIG + +E Q
Sbjct: 283 NTNHRHSVLDNTNCDIDVLFRFFECIFGAKIGCINVEVNQ 322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,847,708
Number of Sequences: 539616
Number of extensions: 3847495
Number of successful extensions: 6184
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6164
Number of HSP's gapped (non-prelim): 17
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)