Query 027452
Match_columns 223
No_of_seqs 222 out of 1171
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 16:59:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027452.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027452hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k25_A SLR1438 protein; struct 100.0 1E-45 3.6E-50 307.4 20.3 203 8-223 59-287 (289)
2 2cir_A Hexose-6-phosphate muta 100.0 8.6E-45 2.9E-49 303.1 19.4 210 8-223 55-289 (297)
3 2hta_A Putative enzyme related 100.0 4.4E-44 1.5E-48 300.3 20.3 206 8-222 87-306 (309)
4 1jov_A HI1317; hypothetical pr 100.0 3.7E-43 1.3E-47 289.2 19.0 195 8-221 68-269 (270)
5 3dcd_A Galactose mutarotase re 100.0 2.8E-40 9.5E-45 276.6 20.8 202 10-222 43-291 (307)
6 3q1n_A Galactose mutarotase re 100.0 2.7E-40 9.3E-45 275.3 19.4 205 10-222 43-293 (294)
7 3nre_A Aldose 1-epimerase; str 100.0 1.5E-39 5.1E-44 270.4 17.2 204 8-223 43-289 (291)
8 3os7_A Galactose mutarotase-li 100.0 1.7E-39 5.7E-44 275.8 17.4 209 8-223 69-339 (341)
9 3mwx_A Aldose 1-epimerase; str 100.0 3.5E-39 1.2E-43 272.4 17.7 209 8-223 62-322 (326)
10 1yga_A Hypothetical 37.9 kDa p 100.0 5.3E-35 1.8E-39 248.3 12.3 205 15-222 62-340 (342)
11 1snz_A Aldose 1-epimerase; mut 100.0 6.3E-34 2.1E-38 241.8 15.9 202 9-222 73-341 (344)
12 1lur_A Aldose 1-epimerase; vit 100.0 2.8E-33 9.7E-38 237.2 14.2 201 13-222 67-335 (339)
13 1nsx_A Galactose mutarotase; e 100.0 1.1E-31 3.9E-36 227.9 17.0 198 14-222 63-336 (347)
14 3imh_A Galactose-1-epimerase; 100.0 1E-30 3.4E-35 220.5 15.7 203 14-223 69-330 (338)
15 1z45_A GAL10 bifunctional prot 100.0 2.2E-30 7.6E-35 238.3 15.6 209 12-223 423-699 (699)
16 3ty1_A Hypothetical aldose 1-e 99.9 1.4E-21 4.8E-26 167.6 11.4 192 24-222 132-351 (384)
17 4ep8_B Urease subunit beta; al 90.6 0.22 7.4E-06 33.5 3.2 40 74-115 13-52 (101)
18 3isy_A Bsupi, intracellular pr 87.9 1.5 5.2E-05 30.7 6.1 34 67-100 6-39 (120)
19 4ubp_B Protein (urease (chain 87.6 0.36 1.2E-05 33.8 2.7 40 74-115 19-58 (126)
20 4ac7_B Urease subunit beta; hy 87.6 0.36 1.2E-05 33.8 2.7 40 74-115 19-58 (126)
21 2yfo_A Alpha-galactosidase-suc 83.6 10 0.00035 34.7 11.1 98 14-119 74-200 (720)
22 2xn2_A Alpha-galactosidase; hy 77.9 15 0.00051 33.7 10.1 45 48-99 135-181 (732)
23 3bs6_A Inner membrane protein 76.0 11 0.00039 29.9 7.9 48 48-107 92-141 (280)
24 3qga_A UREA2, fusion of urease 74.4 1.4 4.7E-05 33.9 1.9 51 63-115 105-157 (225)
25 4fnq_A Alpha-galactosidase AGA 72.9 22 0.00075 32.6 9.8 66 47-119 130-200 (729)
26 1yew_A Particulate methane mon 72.2 4.2 0.00014 33.8 4.4 28 71-98 256-283 (382)
27 1e9y_A Urease subunit alpha; h 71.5 1.5 5.2E-05 34.0 1.5 51 63-115 106-157 (238)
28 3rfr_A PMOB; membrane, oxidore 69.5 4.3 0.00015 34.1 3.9 28 71-98 290-317 (419)
29 3blc_A Inner membrane protein 66.7 24 0.00082 28.8 8.0 36 68-107 135-172 (330)
30 2kl8_A OR15; structural genomi 64.8 6.8 0.00023 23.9 3.1 18 69-86 30-47 (85)
31 3mi6_A Alpha-galactosidase; NE 61.4 51 0.0017 30.3 9.7 67 47-120 131-202 (745)
32 1k1x_A 4-alpha-glucanotransfer 58.8 22 0.00074 32.2 6.8 32 65-96 540-571 (659)
33 2ys4_A Hydrocephalus-inducing 55.6 15 0.0005 25.2 4.1 39 70-108 32-70 (122)
34 4gy7_A Urease; JACK bean, hydr 54.3 9.1 0.00031 35.8 3.6 31 73-105 143-173 (840)
35 3ndz_E Endoglucanase D; cellot 52.2 25 0.00087 23.7 4.8 36 70-108 3-41 (107)
36 4hhu_A OR280; engineered prote 38.8 28 0.00095 24.0 3.2 17 70-86 32-48 (170)
37 1so9_A Cytochrome C oxidase as 37.0 25 0.00085 25.8 2.9 48 48-97 31-80 (164)
38 2jny_A Uncharacterized BCR; st 36.9 6.7 0.00023 24.3 -0.2 15 8-22 39-53 (67)
39 3cfu_A Uncharacterized lipopro 36.7 30 0.001 25.1 3.3 26 80-108 48-73 (159)
40 2ab9_A Pro-SFTI-1; protein, be 35.3 6.8 0.00023 19.4 -0.2 7 13-19 22-28 (31)
41 2e6j_A Hydin protein; PAPD, st 34.5 96 0.0033 20.2 5.9 22 78-99 25-46 (112)
42 3abz_A Beta-glucosidase I; gly 34.1 16 0.00056 34.1 1.9 32 62-93 710-750 (845)
43 2jr6_A UPF0434 protein NMA0874 33.5 8 0.00028 24.0 -0.2 15 8-22 37-51 (68)
44 2xbt_A Cellulosomal scaffoldin 33.0 35 0.0012 24.8 3.2 33 78-110 23-56 (160)
45 2hf1_A Tetraacyldisaccharide-1 32.9 7.9 0.00027 24.0 -0.3 15 8-22 37-51 (68)
46 2kpi_A Uncharacterized protein 32.6 8.5 0.00029 22.9 -0.2 14 8-21 39-52 (56)
47 2wnx_A Glycoside hydrolase, fa 31.6 46 0.0016 24.4 3.7 32 78-109 26-58 (170)
48 2js4_A UPF0434 protein BB2007; 31.2 8.8 0.0003 24.0 -0.3 15 8-22 37-51 (70)
49 2x3c_A Toxic extracellular end 30.9 50 0.0017 27.2 4.1 23 79-102 36-58 (343)
50 3qbt_B Inositol polyphosphate 29.9 1.4E+02 0.0049 20.8 7.0 27 193-222 74-100 (140)
51 2pk7_A Uncharacterized protein 29.4 9.9 0.00034 23.7 -0.3 15 8-22 37-51 (69)
52 2g30_A AP-2 complex subunit be 28.1 88 0.003 24.6 5.0 29 67-95 43-71 (258)
53 2k5r_A Uncharacterized protein 28.0 13 0.00044 24.8 0.0 14 8-21 64-77 (97)
54 3zqx_A Cellulose 1,4-beta-cell 26.7 65 0.0022 23.0 3.6 33 78-110 16-49 (146)
55 1exg_A EXO-1,4-beta-D-glycanas 25.4 88 0.003 21.0 4.0 18 78-95 18-35 (110)
56 3lzq_A P19 protein; copper bin 22.4 1.6E+02 0.0054 21.4 4.9 27 81-107 66-100 (159)
57 1g43_A Scaffolding protein; be 21.4 55 0.0019 23.7 2.5 32 78-109 19-51 (160)
58 2x41_A Beta-glucosidase; hydro 20.4 73 0.0025 29.1 3.5 32 62-93 590-629 (721)
No 1
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=1e-45 Score=307.36 Aligned_cols=203 Identities=22% Similarity=0.391 Sum_probs=167.6
Q ss_pred cccccccEEcCCCCC---C---------CCCCceeEeeCCcEEEeeecCCCccEEEEEEecCccccccCCcceEEEEEEE
Q 027452 8 WDSGGVPHCFPQFGP---G---------PMQQHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMWDFSFQALFKVI 75 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~---~---------~~~~HGf~r~~~w~v~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~ 75 (223)
++|||+|+||||+|| + .+++|||+|++.|++++.. +++..+|+|+|.++++++++|||+|+++++|+
T Consensus 59 ~~~gg~Pvl~P~~gri~~g~~~~~g~~y~l~~HGf~r~~~W~~~~~~-~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~ 137 (289)
T 3k25_A 59 SVRGGIPILFPICGNLPQDQFNHAGKSYRLKQHGFARDLPWEVIGQQ-TQDNARLDLRLSHNDATLEAFPFAFELVFSYQ 137 (289)
T ss_dssp CCCBSBCEEBSCSSCCGGGEEEETTEEEECCTTBSGGGSCCEEEEEE-CSSSEEEEEEEECCHHHHTTSCSCEEEEEEEE
T ss_pred ccCCCCCEEECCCCCCCCCEEEECCEEeecCCCCCcccCCeEEEEec-CCCCcEEEEEEecChhHHhcCCceEEEEEEEE
Confidence 589999999999999 1 5899999999999999765 33456899999998877899999999999999
Q ss_pred EeCCcEEEEEEEEeCCCCcEEEeeeccceEEEeece-eEEecccCCeeecCCCCCCCCCCCccccceeecC-CCcceEEe
Q 027452 76 LNTKSISTELTITNTDNKPFSFSSALHTYFRASVTG-ASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFP-GFVDCIYL 153 (223)
Q Consensus 76 L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~~~-~~i~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~D~~y~ 153 (223)
|++++|+++++++|+++++|||++|+||||++++.. +++.+.. ..|+|....... ...+.+.+. ..+|++|.
T Consensus 138 L~~~~L~i~~~~~N~~~~~~~~~~~~H~yF~~~~~~~~~~~~~~-~~~~d~~~~~~~-----~~~~~~~~~~~~~D~~~~ 211 (289)
T 3k25_A 138 LQGHSLRIEQRIANLGDQRMPFSLGFHPYFFCREKLGITLAIPA-NDYLDQKTGDCH-----GYDGQLNLTSPELDLAFT 211 (289)
T ss_dssp EETTEEEEEEEEEECSSSCEEECCEECCEEECSCCTTCEEECSC-SEEEETTTCCEE-----ECCSCCCTTSSEEEEEEC
T ss_pred EeCCEEEEEEEEEcCCCCcceeEEecCcEEccCCcceEEEEcCc-ccccccccCccc-----ccCCcccCCchhhceEee
Confidence 999999999999999999999999999999999866 7777654 345664332110 112234443 57899998
Q ss_pred CC-CCeEEE-eCCCCCeEEEEeCC-CCcEEEeCCCCCCCCCCCceEEeccCce---------eceEECCCCeEEEEEEEE
Q 027452 154 DA-PSVVHL-DNGLGDTITIRNTN-WSDAVLWNPHMQMEACYKDFVCVENAKI---------GKVQLEPEQSWTAKQHLS 221 (223)
Q Consensus 154 ~~-~~~~~l-~~~~~~~l~i~~~~-~~~~vvwtp~~~~~~~~~~~vCiEP~~~---------~~~~L~pGe~~~~~~~i~ 221 (223)
.. .+.++| ++..+++|+|..++ ++++|||||.. ++|||||||+. +.++|+|||+++++++|+
T Consensus 212 ~~~~~~~~l~~~~~~~~i~v~~~~~~~~~vvw~~~~------~~fvCvEP~~~~~da~n~~~~~~~L~PGe~~~~~~~i~ 285 (289)
T 3k25_A 212 QISQPRAHFIDPDRNLKIEVSFSELYQTLVLWTVAG------KDYLCLEPWSGPRNALNSGEQLAWVEPYSSRSAWVNFQ 285 (289)
T ss_dssp CCSSSEEEEEETTTTEEEEEEECTTCCEEEEEEESS------SCEEEEEEESSCTTHHHHCTTCEEECTTEEEEEEEEEE
T ss_pred cCCCCeEEEEECCCCCEEEEEeCCCCcEEEEEecCC------CCEEEEccccCCCCcccCCCCcEEECCCCeEEEEEEEE
Confidence 75 457888 88889999999985 99999999864 78999999972 239999999999999998
Q ss_pred eC
Q 027452 222 IN 223 (223)
Q Consensus 222 v~ 223 (223)
++
T Consensus 286 v~ 287 (289)
T 3k25_A 286 VS 287 (289)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 2
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=8.6e-45 Score=303.11 Aligned_cols=210 Identities=29% Similarity=0.555 Sum_probs=170.8
Q ss_pred cccccccEEcCCCCC-C------CCCCceeEeeCCcEEEeeecCCCccEEEEEEec---CccccccCCcceEEEEEEEEe
Q 027452 8 WDSGGVPHCFPQFGP-G------PMQQHGFARNMDWSILDSENVEGNPVITLELKD---GPYSRAMWDFSFQALFKVILN 77 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~-~------~~~~HGf~r~~~w~v~~~~~~~~~~~v~l~l~~---~~~~~~~~P~~f~l~~~y~L~ 77 (223)
++|||+|+|||++|| . .+++|||+|++.|++++.+ +++..+++|++.+ +++++++|||+|+++++|+|+
T Consensus 55 ~~~GGip~l~P~~gr~~~~~~~y~l~~HGfar~~~W~v~~~~-~~~~~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~ 133 (297)
T 2cir_A 55 PVRGGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEFLGQT-KENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELG 133 (297)
T ss_dssp CCSBSBCEEBSCSSCCSSSTTGGGSCTTBSGGGSBCEEEEEE-EETTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEEC
T ss_pred CccCCCCEEEEecCCCCCCcccCCCCCccccCCCceEEEeec-cCCceEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEc
Confidence 689999999999999 2 6899999999999998764 1123679999998 777888999999999999999
Q ss_pred CCcEEEEEEEEeCC-CCcEEEeeeccceEEEeece-eEEecccCCeeecCCCCCCCCCCCccccceeecCCCcceEEeCC
Q 027452 78 TKSISTELTITNTD-NKPFSFSSALHTYFRASVTG-ASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDA 155 (223)
Q Consensus 78 ~~~L~i~~~v~N~~-~~~~p~~~g~HpyF~~~~~~-~~i~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~D~~y~~~ 155 (223)
+++|+|+++++|++ +++|||++|+||||+++++. +.+.++.+..++|.... ..+. .....+++.+++|++|...
T Consensus 134 ~~~L~i~~~~~N~~~d~~~~~~~~~H~YFnl~~~~~~~~~gv~~~~~~d~~~~--~~~~--~~~~~~~~~~~~D~~~~~~ 209 (297)
T 2cir_A 134 SDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLLK--ESYV--DKHPVVTFNQETDVIYQNV 209 (297)
T ss_dssp SSEEEEEEEEECCCSSCCEEEEEEECCEEECSCGGGEEEESCTTCEEEETTTT--EEEE--CCSSSBCCSSCEEEEECCC
T ss_pred CCEEEEEEEEEcCCCCcceEEeeecCceEeCCCccceEEecCCCCccEeccCC--cccc--ccCCccccCCccceEEeCC
Confidence 89999999999999 99999999999999998765 67777655456775421 1111 1234566777899999765
Q ss_pred C--CeEEE-eCCCCCeEEEEeCCCCcEEEeCCCCC---------CCCCCCceEEeccCce-eceEECCCCeEEEEEEEEe
Q 027452 156 P--SVVHL-DNGLGDTITIRNTNWSDAVLWNPHMQ---------MEACYKDFVCVENAKI-GKVQLEPEQSWTAKQHLSI 222 (223)
Q Consensus 156 ~--~~~~l-~~~~~~~l~i~~~~~~~~vvwtp~~~---------~~~~~~~~vCiEP~~~-~~~~L~pGe~~~~~~~i~v 222 (223)
. ..++| ++ ++++|+|.++++|++|||||+.+ .+.+|++|||||||+. +.++|+|||+++.+++|++
T Consensus 210 ~~~~~~~l~~~-~g~~l~v~~~~~p~~~v~t~~~~~~~~~~~~~~~~~~~~~vClEp~~~~~~~~L~pGe~~~~~~~~~~ 288 (297)
T 2cir_A 210 SAERAIQIVDK-GVQIHTLKRYNLPDTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLLCK 288 (297)
T ss_dssp CTTCCEEEEET-TEEEEEEEEESCCEEEEEECHHHHHHHCTTCCSTTGGGGEEEEEEEEEEEEEEECTTCEEEEEEEEEC
T ss_pred CCCccEEEEcC-CCCEEEEEecCCCcEEEECcchhhccccccCCCccccccEEEECceECCCCEEECCCCeEEEEEEEEE
Confidence 4 57889 88 89999999988999999998411 1234578999999986 4599999999999999986
Q ss_pred C
Q 027452 223 N 223 (223)
Q Consensus 223 ~ 223 (223)
.
T Consensus 289 ~ 289 (297)
T 2cir_A 289 E 289 (297)
T ss_dssp C
T ss_pred E
Confidence 3
No 3
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=4.4e-44 Score=300.27 Aligned_cols=206 Identities=31% Similarity=0.526 Sum_probs=168.6
Q ss_pred cccccccEEcCCCCC---CCCCCceeEeeCCcEEEeeecCCCccEEEEEEecCccccccCCcceEEEEEEEEeCCcEEEE
Q 027452 8 WDSGGVPHCFPQFGP---GPMQQHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMWDFSFQALFKVILNTKSISTE 84 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~---~~~~~HGf~r~~~w~v~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~ 84 (223)
++|||+|+||||+|| |++++|||+|++.|++++.+++++.++|+|+|.++++++++|||+|+++++|+| +++|+++
T Consensus 87 ~~~GG~pil~P~~gRi~~g~~~~HGfar~~~W~v~~~~~~~~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L-~~~L~i~ 165 (309)
T 2hta_A 87 ALRGGVPICWPWFGPAAQQGLPSHGFARNLPWALKAHNEDDNGVMLTFELQSSEATRKYWPHDFTLLARFKV-GKTCEIE 165 (309)
T ss_dssp CCSBSBCEEBSCCSSCSSTTCCTTBSGGGSBCEEEEEEECSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEE-SSSEEEE
T ss_pred CeeccceEEEecCCCCCCCCCCCccCcCCCceEEEeEecCCCceEEEEEeCCChHHhhcCCCceEEEEEEEE-CCceEEE
Confidence 689999999999999 478999999999999987763333478999999887778899999999999999 9999999
Q ss_pred EEEEeCCCCcEEEeeeccceEEEeece-eEEecccCCeeecCCCCCCCCCCCccccceeecCCCcceEEeCCCCeEEE-e
Q 027452 85 LTITNTDNKPFSFSSALHTYFRASVTG-ASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAPSVVHL-D 162 (223)
Q Consensus 85 ~~v~N~~~~~~p~~~g~HpyF~~~~~~-~~i~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l-~ 162 (223)
++++| +|||++|+||||+++++. +.+..+ ...|+|.++. +... ...+..++|..++|++|.+....++| +
T Consensus 166 ~~~~N----~~~~~~g~H~YFnl~~~~~~~l~~~-~~~~~~~~~~--~~~~-~~~~~~~df~~~~D~~~~~~~~~~~l~~ 237 (309)
T 2hta_A 166 LEAHG----EFATTSALHSYFNVGDIANVKVSGL-GDRFIDKVND--AKEG-VLTDGIQTFPDRTDRVYLNPEACSVIHD 237 (309)
T ss_dssp EEEES----SEEEEEEECCEEECSCGGGCEEECC-CSEEEETTTT--TEEE-ECSSSCEECSSCEEEEESSCCSEEEEEE
T ss_pred EEEEC----CeEehhcCCceEecCCccceEEECC-CCceEeccCC--cccc-cccCCceecCCccCcEEeCCCCCEEEEe
Confidence 99998 899999999999998754 555555 3556764432 2110 01244678888999999865567889 9
Q ss_pred CCCCCeEEEEeCCCCcEEEeCCCCC--------CCCCCCceEEeccCce-eceEECCCCeEEEEEEEEe
Q 027452 163 NGLGDTITIRNTNWSDAVLWNPHMQ--------MEACYKDFVCVENAKI-GKVQLEPEQSWTAKQHLSI 222 (223)
Q Consensus 163 ~~~~~~l~i~~~~~~~~vvwtp~~~--------~~~~~~~~vCiEP~~~-~~~~L~pGe~~~~~~~i~v 222 (223)
+.++++|+|.++++|++|||||+.+ .+.+|++|||||||+. +.++|+|||+++.+++|++
T Consensus 238 ~~~g~~l~v~~~~~p~~~vwtp~~~~~~~~~d~~~~~~~~~vClEp~~~~~~~~L~PGe~~~~~~~~~~ 306 (309)
T 2hta_A 238 ATLNRTIDVVHHHHLNVVGWNPGPALSVSMGDMPDDGYKTFVCVETVYATAPQQATEEKPSRLAQTICV 306 (309)
T ss_dssp TTTTEEEEEEEESCSEEEEEECHHHHHHHCTTSCTTGGGGEEEEEEEEEEEEEEEBTTBCEEEEEEEEE
T ss_pred CCCCcEEEEEECCCCcEEEECCCcccccccccCCccccccEEEECeeecCCCEEECCCCeEEEEEEEEE
Confidence 9999999999988999999999521 1334578999999996 4599999999999999986
No 4
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=3.7e-43 Score=289.22 Aligned_cols=195 Identities=28% Similarity=0.397 Sum_probs=157.3
Q ss_pred cccccccEEcCCCCCCCCCCceeEeeCCcEEEeeecCCCccEEEEEEecCccccccCCcceEEEEEEEEeCCcEEEEEEE
Q 027452 8 WDSGGVPHCFPQFGPGPMQQHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMWDFSFQALFKVILNTKSISTELTI 87 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~~~~~~HGf~r~~~w~v~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v 87 (223)
+||||+||||||||+..+|+|||||+++|+|++.+++++...++|.+.+++ +.|+++++|+|. |+++++|
T Consensus 68 ~irGGiPvlfP~~gr~~~~~HGfaR~~~W~v~~~~~~~~~v~l~~~l~~~~-------~~f~l~~~~~L~---l~~~~~v 137 (270)
T 1jov_A 68 AIRGGVPICYPWFGGVKQPAHGTARIRLWQLSHYYISVHKVRLEFELFSDL-------NIIEAKVSMVFT---DKCHLTF 137 (270)
T ss_dssp CCSBSCCEEBSSCGGGSSSTTBSGGGSBCEEEEEEEETTEEEEEEEEECTT-------SCEEEEEEEEES---SSEEEEE
T ss_pred CccCccEEEEeccCCCCCCCCceecCCCcEEeeeccCCCcEEEEEEECCCc-------cccEEEEEEEEC---CeEEEEE
Confidence 589999999999999778999999999999998753333446677776543 358899999994 8999999
Q ss_pred EeCCCCcEEEeeeccceEEEeece-eEEecccCCeeecCCCCCCCCCCCccccceeecCCCcceEEeCCCCeEEE-eCCC
Q 027452 88 TNTDNKPFSFSSALHTYFRASVTG-ASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAPSVVHL-DNGL 165 (223)
Q Consensus 88 ~N~~~~~~p~~~g~HpyF~~~~~~-~~i~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l-~~~~ 165 (223)
+|+|++ ||++|+||||+++++. +++.++.. .|+|+++.... ...+.+.+.+++|++|...++.++| ++..
T Consensus 138 ~N~g~~--p~~~g~HpyF~v~d~~~~~v~g~~~-~~~d~l~~~~~-----~~~~~~~~~~~~D~vy~~~~~~~~i~d~~~ 209 (270)
T 1jov_A 138 THYGEE--SAQAALHTYFNIGDINQVEVQGLPE-TCFNSLNQQQE-----NVPSPRHISENVDCIYSAENMQNQILDKSF 209 (270)
T ss_dssp EECCSS--CEEEEECCEEECSCGGGEEEESCCS-EEEETTTTEEE-----ECCSSBCCSSCEEEEEECSSSEEEEEETTT
T ss_pred EeCCch--hHhhhcccceecCCcceEEEECCCC-cceeccCCccc-----ccCCcccCCCCccceeCCCCCCEEEEECCC
Confidence 999986 6899999999999866 88888854 67886543111 1233566778899999987778889 9888
Q ss_pred CCeEEEEeCCCCcEEEeCCCCCC-----CCCCCceEEeccCceeceEECCCCeEEEEEEEE
Q 027452 166 GDTITIRNTNWSDAVLWNPHMQM-----EACYKDFVCVENAKIGKVQLEPEQSWTAKQHLS 221 (223)
Q Consensus 166 ~~~l~i~~~~~~~~vvwtp~~~~-----~~~~~~~vCiEP~~~~~~~L~pGe~~~~~~~i~ 221 (223)
+++|+|..++++++|||||+.++ ++++++||||||+. ..+.|+|||+++.+++|+
T Consensus 210 ~~~i~v~~~~~~~~vvWnP~~~~~~d~~~~~~~~fvCvEp~~-~~~~L~PGe~~~~~~~i~ 269 (270)
T 1jov_A 210 NRTIALHHHNASQFVLWNPWHKKTSGMSETGYQKMLCLETAR-IHHLLEFGESLSVEISLK 269 (270)
T ss_dssp TEEEEEEEESCSEEEEEECTTSCCTTCCTTGGGGEEEEEEEE-EEEEECTTCEEEEEEEEC
T ss_pred CcEEEEEEcCCCeEEEECCCcccccccccccCccEEEeCccc-cceEECCCCEEEEEEEEE
Confidence 99999999999999999997421 44578999999954 347999999999888874
No 5
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.8e-40 Score=276.57 Aligned_cols=202 Identities=18% Similarity=0.288 Sum_probs=156.0
Q ss_pred cccccEEcCCCCC---C---------CCCCceeEeeCCcEEEeeecCCCccEEEEEEecCccccccCCcceEEEEEEEEe
Q 027452 10 SGGVPHCFPQFGP---G---------PMQQHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMWDFSFQALFKVILN 77 (223)
Q Consensus 10 rgG~PvlfP~~g~---~---------~~~~HGf~r~~~w~v~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~ 77 (223)
.+|+|+||||+|| + .+++|||+|++.|++++.+ +++|+|++.++++++++|||+|+++++|+|+
T Consensus 43 ~~~~pil~P~~nRi~~g~~~~~G~~y~l~~HGf~r~~~w~v~~~~----~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~ 118 (307)
T 3dcd_A 43 GRHAPVLFPIVGRLKNDEYTYKGKTYHLGQHGFARNADFEVENHT----KESITFLLKDNEETRKVYPFKFEFRVNYNLM 118 (307)
T ss_dssp CCSSCEEBSCSSCCGGGEEEETTEEEECCTTBSGGGSBCEEEEEE----TTEEEEEEECCHHHHHHSCCCEEEEEEEEEE
T ss_pred CCCCcEEEeecCccCCCeEEECCEEEecCCCCCccCcEEEEEEec----CCEEEEEEecCcchhhhCCCceEEEEEEEEe
Confidence 4579999999999 2 5899999999999999887 7899999999877788999999999999999
Q ss_pred CCcEEEEEEEEeCCCCcEEEeeeccceEEEee--------ceeEEecccCCeeecCCCCCCCCCCCc-----cccceeec
Q 027452 78 TKSISTELTITNTDNKPFSFSSALHTYFRASV--------TGASVKGLKGCKTLNKDPDPKNPMEGK-----EERDRVTF 144 (223)
Q Consensus 78 ~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~--------~~~~i~~~~~~~~~d~~~~~~~~~~~~-----~~~~~~~~ 144 (223)
+++|+|+++++|+|+++|||++|+||||++++ ..+++++... ++....+++.++.. .....+++
T Consensus 119 ~~~L~i~~~v~N~g~~~~p~~~g~HpyF~~~~~~~~~~~d~~L~~~a~~~---~~~~~l~~g~~~~~~~~~~~~~~~~~l 195 (307)
T 3dcd_A 119 NNLLEENFSVVNKSDETMIFGVGGHPGFNLPTDHGENKEDFYFDMHPSVT---RVRIPLKDASLDWNNRSLAPTDSLIAL 195 (307)
T ss_dssp TTEEEEEEEEEECSSSCEEECEEECCEEECCCTTSCCGGGEEEEEESCCC---EEECCEETTEECGGGCEEECTTSCEEC
T ss_pred CCEEEEEEEEECCCCCcEeEEEEcCcEEEcCCCCCCccccEEEEEcCCCc---eeeeecCCcccccccccccccCCcccC
Confidence 99999999999999999999999999999973 1277776432 22222122211110 01223445
Q ss_pred CC-Ccc--eE-EeCC-C-CeEEE-eCCCCCeEEEEeCCCCcEEEeCCCCCCCCCCCceEEeccCce--------------
Q 027452 145 PG-FVD--CI-YLDA-P-SVVHL-DNGLGDTITIRNTNWSDAVLWNPHMQMEACYKDFVCVENAKI-------------- 203 (223)
Q Consensus 145 ~~-~~D--~~-y~~~-~-~~~~l-~~~~~~~l~i~~~~~~~~vvwtp~~~~~~~~~~~vCiEP~~~-------------- 203 (223)
.. .+| .+ |... . ..++| ++.+++.|+|..++||+++||+|... .++|||||||+.
T Consensus 196 ~~~~fd~da~~~~~~~~~~~v~l~~~~~g~~v~v~~~~fp~l~iwt~~~~----~~~fvciEP~tg~~Da~n~~~~~~~k 271 (307)
T 3dcd_A 196 SDDLFKDDALIYELRGNDNKVSLRTDKNKFHVNVWTRDAPFVGIWSQYPK----TDNYVCIEPWWGIADRDDADGDLEHK 271 (307)
T ss_dssp CSGGGTTSCEEEECCSSCEEEEEEETTSSCEEEEEEETCSEEEEECCSSS----CCSEEEEEEEESCCCBTTCCSBGGGC
T ss_pred CHHHcCCceEEEcCCCCceEEEEEeCCCCcEEEEEECCCCEEEEECcCCC----CCCEEEEccccCCCCCCCCCCchhcc
Confidence 43 344 33 3333 3 56888 88889999999988999999998321 268999999961
Q ss_pred -eceEECCCCeEEEEEEEEe
Q 027452 204 -GKVQLEPEQSWTAKQHLSI 222 (223)
Q Consensus 204 -~~~~L~pGe~~~~~~~i~v 222 (223)
+.++|+|||+++++++|++
T Consensus 272 ~gl~~L~PGe~~~~~~~i~~ 291 (307)
T 3dcd_A 272 YGMNHLKPGKEFQAGFSMTY 291 (307)
T ss_dssp TTCEEECTTCEEEEEEEEEE
T ss_pred CCCEEECCCCEEEEEEEEEE
Confidence 2389999999999999987
No 6
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=100.00 E-value=2.7e-40 Score=275.30 Aligned_cols=205 Identities=21% Similarity=0.385 Sum_probs=157.2
Q ss_pred cccccEEcCCCCC---C---------CCCCceeEeeCCcEEEeeecCCCccEEEEEEecCccccccCCcceEEEEEEEEe
Q 027452 10 SGGVPHCFPQFGP---G---------PMQQHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMWDFSFQALFKVILN 77 (223)
Q Consensus 10 rgG~PvlfP~~g~---~---------~~~~HGf~r~~~w~v~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~ 77 (223)
++|.|+||||+|| + .+++|||+|++.|++++.+ +++|+|++.++++++++|||+|+++++|+|+
T Consensus 43 ~~~~p~l~P~~~Ri~~g~~~~~G~~y~l~~HGf~r~~~w~~~~~~----~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~ 118 (294)
T 3q1n_A 43 NRHAPILFPSIGKSNQDQYRLGAKTYPMSQHGFARDYDFDVSDKS----DSAVTFTQHQNAETLKKFPFEYTLAVTYMLT 118 (294)
T ss_dssp SCSCCEEBSCCSCCGGGEEEETTEEEECCTTBSGGGSBCEEESCC----SSEEEEEEECCHHHHHHSCCCEEEEEEEEEE
T ss_pred cCCCCEEEeccCCcCCCEEEECCcEEccCCCCCccCcceEEEEcc----CCEEEEEEEcCcchhhcCCeEEEEEEEEEEe
Confidence 4578999999999 2 6899999999999998765 7789999999888788999999999999999
Q ss_pred CCcEEEEEEEEeCCCCcEEEeeeccceEEEee--------ceeEEeccc-CCee--ecCCCCCCCC-CCCcc-ccceeec
Q 027452 78 TKSISTELTITNTDNKPFSFSSALHTYFRASV--------TGASVKGLK-GCKT--LNKDPDPKNP-MEGKE-ERDRVTF 144 (223)
Q Consensus 78 ~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~--------~~~~i~~~~-~~~~--~d~~~~~~~~-~~~~~-~~~~~~~ 144 (223)
+++|+|+++++|+++++|||++|+||||++++ ..+++++.+ ...+ +|....+++. .+... ....+.+
T Consensus 119 ~~~L~i~~~~~N~~~~~~p~~~~~H~yFnl~~~~~~~~~d~~l~~~a~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~l 198 (294)
T 3q1n_A 119 DGGLSVHYTVTNDDSKSMPFALGFHPAFNVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFRNGDVEDIPGAEGNRLPL 198 (294)
T ss_dssp TTEEEEEEEEEECSSSCEEECEEECCEEECCBCTTSSBCSCEEEEECCSSCCEEEEESSTTSEEEEEEECTTCBTTEEEC
T ss_pred CCEEEEEEEEEcCCCCceeeeEecCcEEEcCCCCCCcccCEEEEEcCCcccceEEeeCCCCcCCCcccccccCCCceecC
Confidence 99999999999999999999999999999973 127887654 2222 3322222211 00001 1233444
Q ss_pred CC-Ccc--eEEeCC--CCeEEE-eCCCCCeEEEEeCCCCcEEEeCCCCCCCCCCCceEEeccCce---------------
Q 027452 145 PG-FVD--CIYLDA--PSVVHL-DNGLGDTITIRNTNWSDAVLWNPHMQMEACYKDFVCVENAKI--------------- 203 (223)
Q Consensus 145 ~~-~~D--~~y~~~--~~~~~l-~~~~~~~l~i~~~~~~~~vvwtp~~~~~~~~~~~vCiEP~~~--------------- 203 (223)
.. .+| .+.++. ...++| ++.+++.|+|.++++|+++||+|... .++|||||||+.
T Consensus 199 ~~~~fd~d~~~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~l~iwt~~~~----~~~~vciEP~tg~~Da~n~~~~~~~k~ 274 (294)
T 3q1n_A 199 THDLLDGGLVILANSEIAKATLASPHHDHSITLDISDFPYLTIWSPEHK----KAPFIAVEPFDGLPDQAGEPTDWYTKL 274 (294)
T ss_dssp CHHHHTTCCEEECCTTCCEEEEECTTCSCCEEEECTTCSEEEEECCTTS----CCSEEEEEEEESCCCBSSSCCBTTTCT
T ss_pred CHHHhcCCeEEEcCCCccEEEEEeCCCCcEEEEEECCCCEEEEECcCCC----CCCEEEEeCcCCCCCCCCCCCchhccC
Confidence 43 354 233332 357889 88889999999988999999998531 158999999951
Q ss_pred eceEECCCCeEEEEEEEEe
Q 027452 204 GKVQLEPEQSWTAKQHLSI 222 (223)
Q Consensus 204 ~~~~L~pGe~~~~~~~i~v 222 (223)
+.++|+|||+++.+++|+|
T Consensus 275 g~~~L~pGe~~~~~~~I~i 293 (294)
T 3q1n_A 275 GNTTLSAGANKQLALKVEL 293 (294)
T ss_dssp TCEEECTTCEEEEEEEEEE
T ss_pred CCEEECCCCEEEEEEEEEE
Confidence 2389999999999999987
No 7
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=100.00 E-value=1.5e-39 Score=270.35 Aligned_cols=204 Identities=15% Similarity=0.212 Sum_probs=158.5
Q ss_pred cccccccEEcCCCCC---C------------------CCCCceeEeeCCcEEEeeecCCCccEEEEEEecCccccccCCc
Q 027452 8 WDSGGVPHCFPQFGP---G------------------PMQQHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMWDF 66 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~---~------------------~~~~HGf~r~~~w~v~~~~~~~~~~~v~l~l~~~~~~~~~~P~ 66 (223)
++|+|.|+||||+|| + ++++|||+|++.|++++.+ +++|+|++.+. + |||
T Consensus 43 ~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~~N~~~~~~~~HG~~~~~~W~~~~~~----~~~v~l~l~~~----~-~P~ 113 (291)
T 3nre_A 43 ATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHS----DDSLCLVYEHR----S-GVY 113 (291)
T ss_dssp GGGSSEEEEBSCCSBCGGGEEEETTEEEECCCCSTTCSSCBSBSGGGSBCEEEEEC----SSEEEEEEEEE----S-SSC
T ss_pred ccccCCcEEEeeCCEecCCEEEECCEEEECCCCCCCCCCCCCCchhcceeEEEEcc----CCEEEEEEeCC----C-CCc
Confidence 578999999999998 1 4689999999999998876 67899999763 6 999
Q ss_pred ceEEEEEEEEeCCcEEEEEEEEeCCCCcEEEeeeccceEEEeece-eEEecccCCeeecCCCCCCCCCCCccccceeec-
Q 027452 67 SFQALFKVILNTKSISTELTITNTDNKPFSFSSALHTYFRASVTG-ASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTF- 144 (223)
Q Consensus 67 ~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~~~-~~i~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~- 144 (223)
+|+++++|+|++++|+|+++++|+++++|||++|+||||++++.. +++.+..... .|....|++.+.. ....++|
T Consensus 114 ~~~~~v~y~L~~~~L~i~~~~~N~~~~~~~~~~~~H~YFnl~~~~~l~i~a~~~~~-~d~~~iPtg~~~v--~~t~~df~ 190 (291)
T 3nre_A 114 HYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWL-EREQWLAGEFCEQ--LPQELDFN 190 (291)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEECSSSCEEECCEEEEEEECCTTCEEEECCSEEEE-ECGGGCEEEEESS--CCGGGCCS
T ss_pred eEEEEEEEEEeCCeEEEEEEEEECCCCCccceEEcCccEecCCCeEEEEECCEEEE-cCCCcCCCccccC--CCCccccc
Confidence 999999999999999999999999999999999999999998754 8887632111 3433344442210 1122333
Q ss_pred -----C-CCcceEEeCCCCeEEE-eCCCCCeEEEEeCC-CCcEEEeCCCCCCCCCCC-ceEEeccCc-e----------e
Q 027452 145 -----P-GFVDCIYLDAPSVVHL-DNGLGDTITIRNTN-WSDAVLWNPHMQMEACYK-DFVCVENAK-I----------G 204 (223)
Q Consensus 145 -----~-~~~D~~y~~~~~~~~l-~~~~~~~l~i~~~~-~~~~vvwtp~~~~~~~~~-~~vCiEP~~-~----------~ 204 (223)
. .++|++|......++| ++.++++|+|.++. .+.+|||||+...+..|+ .+||||||+ . +
T Consensus 191 ~~~~l~~~~~D~~f~~~~~~a~l~~~~~g~~l~v~t~~p~~~~~vyt~~~~~~~~~~~~~vclEp~~~~pda~n~~~~~~ 270 (291)
T 3nre_A 191 QPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGD 270 (291)
T ss_dssp SCEECCSSCEEEEEESCCSEEEEEEGGGTEEEEEEEESCCSEEEEEECCTTTCTTCCSCEEEEEEESSCTTGGGSGGGTT
T ss_pred CCcCCCCccccceeecCCccEEEEECCCCeEEEEEeCCCCceEEEEcCCCCCCCCccCCEEEEcCccCCCCCCcCCCCCC
Confidence 2 3699999987778889 99899999999863 224899999832223344 899999996 2 1
Q ss_pred ceEECCCCeEEEEEEEEeC
Q 027452 205 KVQLEPEQSWTAKQHLSIN 223 (223)
Q Consensus 205 ~~~L~pGe~~~~~~~i~v~ 223 (223)
.++|+|||+++.+++|+++
T Consensus 271 ~~~L~PGe~~~~~~~~~~~ 289 (291)
T 3nre_A 271 LIALAPGESTTSEMSLRVE 289 (291)
T ss_dssp CEEECTTCEEEEEEEEEEE
T ss_pred CEEECCCCEEEEEEEEEEE
Confidence 3899999999999999873
No 8
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.7e-39 Score=275.78 Aligned_cols=209 Identities=18% Similarity=0.315 Sum_probs=157.5
Q ss_pred cccccccEEcCCCCC---C------------------CCCCceeEeeCCcEEEeeecCCCccEEEEEE--ecCccccccC
Q 027452 8 WDSGGVPHCFPQFGP---G------------------PMQQHGFARNMDWSILDSENVEGNPVITLEL--KDGPYSRAMW 64 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~---~------------------~~~~HGf~r~~~w~v~~~~~~~~~~~v~l~l--~~~~~~~~~~ 64 (223)
++++|+|||||. || | ++++|||+|++.|++++.+++++..+|+|++ .+.++++++|
T Consensus 69 ~~~~G~pv~~p~-nRi~~g~f~~~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~~~~~~~v~~~~~~~d~~~~~~g~ 147 (341)
T 3os7_A 69 PQVYGLPVLFPP-NRIDDGTFKLGDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKKIDQDKALVEVVFDFTKENEAYKYF 147 (341)
T ss_dssp GGGSSCCEESSC-SEEETTEEEETTEEEECCCSBTTTTEEESCSGGGSCCEEEEEEEETTEEEEEEEEEECTTSTTTTTS
T ss_pred CcccceeEeCCC-CcccCCEEEECCEEEEccCCCCCCCcCccCCcccCcEEEEEeecCCCccEEEEEEEeCCCcchhhcC
Confidence 689999999994 76 1 2337999999999999875333344565554 4556667799
Q ss_pred CcceEEEEEEEEeCCcEEEEEEEEeCCCCcEEEeeeccceEEEee-----ce---eEEecccCCeeecCCCCCCCC---C
Q 027452 65 DFSFQALFKVILNTKSISTELTITNTDNKPFSFSSALHTYFRASV-----TG---ASVKGLKGCKTLNKDPDPKNP---M 133 (223)
Q Consensus 65 P~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~-----~~---~~i~~~~~~~~~d~~~~~~~~---~ 133 (223)
||+|+++++|+|++++|+|+++++|+++++|||++|+||||++++ +. +++++..... .|....|++. +
T Consensus 148 P~~~~~~v~y~L~~~~L~i~~~~~N~~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~~a~~~~~-~d~~~iPtG~~~~v 226 (341)
T 3os7_A 148 SHEFQFKLSYELSSKGLKQTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKISIDKFWK-QDSRNLPTGESFAP 226 (341)
T ss_dssp CCCEEEEEEEEEETTEEEEEEEEEECSSSCEEECCEECCEEESSCBTTCCGGGEEEEECEEEEEE-ECTTSCEEEEEECC
T ss_pred CceEEEEEEEEEeCCeEEEEEEEEeCCCCcEEEEEecCceeecCCCCCCCcccEEEEEeCCcEEe-cCcccCCCCccccC
Confidence 999999999999999999999999999999999999999999973 22 6666532111 3554555542 2
Q ss_pred CCcc----ccceeecCCCcceEEeCC----C----CeEEE-eCCCCCeEEEEeC-CCCcEEEeCCCCCCCCCCCceEEec
Q 027452 134 EGKE----ERDRVTFPGFVDCIYLDA----P----SVVHL-DNGLGDTITIRNT-NWSDAVLWNPHMQMEACYKDFVCVE 199 (223)
Q Consensus 134 ~~~~----~~~~~~~~~~~D~~y~~~----~----~~~~l-~~~~~~~l~i~~~-~~~~~vvwtp~~~~~~~~~~~vCiE 199 (223)
.+.. ....+.+..++|++|... + ..++| ++.++++|+|.++ ++|++|||||+. .++|||||
T Consensus 227 ~~~~~df~~~~~~~~~~~~D~~f~~~~~~~~g~~~~~~~l~~~~~g~~l~v~~~~~~p~~~vwt~~~-----~~~~vclE 301 (341)
T 3os7_A 227 TGEQKEYLENGVAVASHPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMG-----DKKYACIE 301 (341)
T ss_dssp CGGGGGGGTTCBCTTSSCCEEEEEECCEEETTEEECEEEEEEGGGTEEEEEEECTTCCEEEEECGGG-----CSSEEEEE
T ss_pred CCccchhhcCCcccCCcchhhhccccccccCCCcceEEEEEeCCCCeEEEEEeCCCCCEEEEEcCCC-----CCCEEEEC
Confidence 1110 112333445899999754 2 35888 8889999999995 899999999864 25799999
Q ss_pred cCce--------------eceEECCCCeEEEEEEEEeC
Q 027452 200 NAKI--------------GKVQLEPEQSWTAKQHLSIN 223 (223)
Q Consensus 200 P~~~--------------~~~~L~pGe~~~~~~~i~v~ 223 (223)
||+. +.++|+|||+++.+++|+++
T Consensus 302 P~~~~pDa~n~~~~~~~~g~~~L~PGe~~~~~~~i~v~ 339 (341)
T 3os7_A 302 PQTSIINSPNVKLDRSVSGFKTLKPNESWSGVCKLYIE 339 (341)
T ss_dssp EESSCTTGGGCSSCHHHHCCEEECTTCEEEEEEEEEEE
T ss_pred CccCCCCccCCCCcccccCceEECCCCEEEEEEEEEEE
Confidence 9851 23899999999999999874
No 9
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=100.00 E-value=3.5e-39 Score=272.40 Aligned_cols=209 Identities=17% Similarity=0.261 Sum_probs=158.0
Q ss_pred cccccccEEcCCCCC---C---------CCC---------CceeEeeCCcEEEeeecCCCccEEEEEEec--CccccccC
Q 027452 8 WDSGGVPHCFPQFGP---G---------PMQ---------QHGFARNMDWSILDSENVEGNPVITLELKD--GPYSRAMW 64 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~---~---------~~~---------~HGf~r~~~w~v~~~~~~~~~~~v~l~l~~--~~~~~~~~ 64 (223)
++++|+||||| +|| | .++ +|||+|++.|++++.+++++..+|+|++.. .++++++|
T Consensus 62 ~~~~G~pv~~p-~nRi~~g~~~~~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~~~~~~~v~~~~~~~~~~~~~~g~ 140 (326)
T 3mwx_A 62 PTLYGIPILFP-PNRISDGTFSFRGRTYHFDINEKDKHNHLHGFLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQF 140 (326)
T ss_dssp TTSSSCCEEBS-CSEEETTEEEETTEEEECCCCBTTTTEEESBSCTTSCCEEEEEEEESSCEEEEEEEEGGGCHHHHHHS
T ss_pred ccccCceEcCC-CCcccCCEEEECCEEEEccCCCCCCCccccCCccCCceEEEEeeccCCceEEEEEEEeCCCCccccCC
Confidence 68999999999 577 2 244 699999999999987633334567766654 45566799
Q ss_pred CcceEEEEEEEEeCCcEEEEEEEEeCCCCcEEEeeeccceEEEe--eceeEEecccCCeeecCCCCCCCCC-C-Cc---c
Q 027452 65 DFSFQALFKVILNTKSISTELTITNTDNKPFSFSSALHTYFRAS--VTGASVKGLKGCKTLNKDPDPKNPM-E-GK---E 137 (223)
Q Consensus 65 P~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~--~~~~~i~~~~~~~~~d~~~~~~~~~-~-~~---~ 137 (223)
||+|+++++|+|++++|+|+++++|+++++|||++|+||||+++ +..+++++..... .|....|++.+ + .. .
T Consensus 141 P~~~~~~v~y~L~~~~L~i~~~~~N~~~~~~~~~~~~H~yFnl~~~~~~l~~~a~~~~~-~d~~~iptg~~~~~~~~~~~ 219 (326)
T 3mwx_A 141 PHHAVVRMTYTIKENTLFKHATVMNKGKEAFPWGIGYHTTFIFPAESSLFSLTADQQWE-LDERLLPTGKLMDVPYKEAL 219 (326)
T ss_dssp CSCEEEEEEEEEETTEEEEEEEEEECSSSCEEECCEECCCEECCTTTEEEEESEEEEEE-ECTTSCEEEEEEECTTHHHH
T ss_pred CceEEEEEEEEEcCCcEEEEEEEEECCCCceeeEEeeccccCCCCCCEEEEEECCcEEE-eCCccCCCCccccCcchhhc
Confidence 99999999999999999999999999999999999999999997 2236666532111 35444444421 1 10 0
Q ss_pred ccceeecCCCcceEEeCC----C--CeEEE-eCCCCCeEEEEeC-CCCcEEEeCCCCCCCCCCCceEEeccCce------
Q 027452 138 ERDRVTFPGFVDCIYLDA----P--SVVHL-DNGLGDTITIRNT-NWSDAVLWNPHMQMEACYKDFVCVENAKI------ 203 (223)
Q Consensus 138 ~~~~~~~~~~~D~~y~~~----~--~~~~l-~~~~~~~l~i~~~-~~~~~vvwtp~~~~~~~~~~~vCiEP~~~------ 203 (223)
....+.+..++|++|+.. . ..++| ++.++++|.+..+ ++|++|||||+. +++|||||||+.
T Consensus 220 ~~~~~~~~~~~D~~f~~~~~~~~~~~~~~l~~~~~g~~l~~~~~~~~p~~~vwt~~~-----~~~~vclEP~~~~~da~n 294 (326)
T 3mwx_A 220 HEGMDLRHKQLDDVFLSSYQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG-----KQGYLCPEPYTWVTNAVN 294 (326)
T ss_dssp HHCBCCTTCCCEEEEEESHHHHCSCCEEEEEETTTTEEEEEEECTTCCEEEEECTTS-----CSSEEEEEEESSCTTGGG
T ss_pred ccCcccCCccccceeeeccccCCCceEEEEEeCCCCEEEEEEeCCCCCEEEEECCCC-----CCCEEEECCccCCCCccc
Confidence 112233456789999764 2 46888 8888999999974 899999999874 257999999971
Q ss_pred --------eceEECCCCeEEEEEEEEeC
Q 027452 204 --------GKVQLEPEQSWTAKQHLSIN 223 (223)
Q Consensus 204 --------~~~~L~pGe~~~~~~~i~v~ 223 (223)
+.++|+|||+++.+++|+++
T Consensus 295 ~~~~~~~~g~~~L~PGe~~~~~~~i~~~ 322 (326)
T 3mwx_A 295 LDLPSSLTGLQVLEPGEETTAKSSITIE 322 (326)
T ss_dssp CCSCHHHHCCEEECTTCEEEEEEEEEEE
T ss_pred cCCCccccCCeEECCCCeEEEEEEEEEE
Confidence 23899999999999999874
No 10
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-35 Score=248.34 Aligned_cols=205 Identities=14% Similarity=0.145 Sum_probs=147.5
Q ss_pred EEcCCCCC---C----------------CCCCceeE---eeCCcEEEeeecC-CCccEEEEEEecC--ccccccCCcceE
Q 027452 15 HCFPQFGP---G----------------PMQQHGFA---RNMDWSILDSENV-EGNPVITLELKDG--PYSRAMWDFSFQ 69 (223)
Q Consensus 15 vlfP~~g~---~----------------~~~~HGf~---r~~~w~v~~~~~~-~~~~~v~l~l~~~--~~~~~~~P~~f~ 69 (223)
+++|++|| + ++++|||+ |++.|++++.... .++++|+|++.+. +++++.|||+|+
T Consensus 62 ~l~p~~nRi~~g~f~~~G~~y~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~~~~~~~~v~l~l~~~~~~~g~~~yP~~~~ 141 (342)
T 1yga_A 62 TVGRYANRIAKGVFSLDDGPHKLTVNNCGNTNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNPNEFPGDLE 141 (342)
T ss_dssp EECSBCSEEGGGEEEETTEEEECCCCBTTBEETTGGGCGGGSBCEECCCEEEETTEEEEEEEEEECSSSSSCCCSSSEEE
T ss_pred EECCCCCceeCCEEEECCEEEEcCCCCCCcccCCCccccCcceeeeEEeeccCCCCCEEEEEEECCcccCCCcCCCeEEE
Confidence 66799998 1 23569999 5899999764211 1256799999875 344455999999
Q ss_pred EEEEEEEeC--CcEEEEEEEEeCCCCcEEEeeeccceEEEee------ce---eEEecccCCeeecCCC-CCCCC---CC
Q 027452 70 ALFKVILNT--KSISTELTITNTDNKPFSFSSALHTYFRASV------TG---ASVKGLKGCKTLNKDP-DPKNP---ME 134 (223)
Q Consensus 70 l~~~y~L~~--~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~------~~---~~i~~~~~~~~~d~~~-~~~~~---~~ 134 (223)
++++|+|++ ++|+|+++++|+++++|||++|+||||++++ +. +++++..... +|... +|++. +.
T Consensus 142 ~~vty~L~~~~~~L~i~~~~~N~~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~l~a~~~~~-~d~~~~iPtg~~~~v~ 220 (342)
T 1yga_A 142 VTVKYTLNVAEMTLDMEYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLE-VTEGALLPTGKIIERN 220 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEESSEEECBCEECCCBCTTTTTCTTCCTTEEEEESCCEEEE-ECTTTCCEEEEEEECS
T ss_pred EEEEEEEeCCCCEEEEEEEEEeCCCCceEEeeeccceEEcCCCCCCCcccceEEEEeCCeEEE-ECCCCCCcCCCeEecC
Confidence 999999984 8999999999999999999999999999972 22 6665532111 34433 44432 11
Q ss_pred Cc--cccceeecCC---CcceEEeCCC----------------CeEEE-eCCCCCeEEEEeCCCCcEEEeCCCCCCCCCC
Q 027452 135 GK--EERDRVTFPG---FVDCIYLDAP----------------SVVHL-DNGLGDTITIRNTNWSDAVLWNPHMQMEACY 192 (223)
Q Consensus 135 ~~--~~~~~~~~~~---~~D~~y~~~~----------------~~~~l-~~~~~~~l~i~~~~~~~~vvwtp~~~~~~~~ 192 (223)
.. .-.....+.. .+|++|+... ..++| ++.+++.|+|.++ +|++|||||+.. ++.|
T Consensus 221 ~~~~df~~~~~l~~~~~~~D~~f~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~vyt~~~~-~~~y 298 (342)
T 1yga_A 221 IATFDSTKPTVLHEDTPVFDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTT-EPTVHLYTGDNL-CGKF 298 (342)
T ss_dssp CCBTTCSSCEEECSSCCCCEEEEECTTTTTCCSSBCTTTSCCEEEEEEECTTTCCEEEEEES-SSEEEEECCTTC-CTTS
T ss_pred CCcccccCCeecCcccCCCCcEEEeCCCccccccccccccccceEEEEEeCCCCeEEEEEeC-CCEEEEECCCCc-cccC
Confidence 11 0012233332 6999997642 35788 8888999999997 999999998621 1112
Q ss_pred --CceEEeccCce---------ec-eEECCCCeEEEEEEEEe
Q 027452 193 --KDFVCVENAKI---------GK-VQLEPEQSWTAKQHLSI 222 (223)
Q Consensus 193 --~~~vCiEP~~~---------~~-~~L~pGe~~~~~~~i~v 222 (223)
+.||||||+.. .. ++|+|||+++.+++|++
T Consensus 299 ~~~~~vclEp~~~pda~n~~~~~~~~~L~pGe~~~~~~~~~f 340 (342)
T 1yga_A 299 VPRSGFAVQQGRYVDAINRDEWRGCVLLKRGEVYTSKTQYKF 340 (342)
T ss_dssp CTTSCBEEEEESCSSGGGCHHHHGGGEEETTCCEEEEEEEEE
T ss_pred CCCCEEEEECCCCCCcccCCCCCCCeEECCCCEEEEEEEEEE
Confidence 68999999862 13 79999999999999986
No 11
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=6.3e-34 Score=241.80 Aligned_cols=202 Identities=12% Similarity=0.149 Sum_probs=148.0
Q ss_pred ccccccEEcCCCCC---C----------------CCCCceeEe---eCCcEEEeeecCCCccEEEEEEecCccccccCCc
Q 027452 9 DSGGVPHCFPQFGP---G----------------PMQQHGFAR---NMDWSILDSENVEGNPVITLELKDGPYSRAMWDF 66 (223)
Q Consensus 9 ~rgG~PvlfP~~g~---~----------------~~~~HGf~r---~~~w~v~~~~~~~~~~~v~l~l~~~~~~~~~~P~ 66 (223)
++ |+ +||||+|| + ++++|||+| ++.|++++.+ ++|+|++.+.+ +.++|||
T Consensus 73 ~~-G~-~l~p~~nRi~~g~f~~~G~~y~L~~N~~~~~lHG~~~g~~~~~W~v~~~~-----~~v~l~l~~~~-~~~gyP~ 144 (344)
T 1snz_A 73 YF-GA-VIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLS-----NGVQFSRISPD-GEEGYPG 144 (344)
T ss_dssp CT-TC-EECSBCSEEGGGEEEETTEEEECCCTBTTBEETTSSSCGGGSBCEEEEET-----TEEEEEEEECT-TGGGCCS
T ss_pred ce-ee-EecCcCCcccCCEEEECCEEEECCCCCCCcccCCCccccccceeeEEEeC-----CEEEEEEECCC-cCCCCCE
Confidence 45 44 89999998 1 245999995 8999998652 46999998876 4679999
Q ss_pred ceEEEEEEEEeCCcEEEEEEEEeCCCCcEEEeeeccceEEEee-----ce---eEEecccCCeeecCCCCCCCC---CCC
Q 027452 67 SFQALFKVILNTKSISTELTITNTDNKPFSFSSALHTYFRASV-----TG---ASVKGLKGCKTLNKDPDPKNP---MEG 135 (223)
Q Consensus 67 ~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~-----~~---~~i~~~~~~~~~d~~~~~~~~---~~~ 135 (223)
+|+++++|+|++++|+|+++++| +++|||++|+|||||+++ +. +++++..... .|...+|++. +.+
T Consensus 145 ~~~~~vty~L~~~~L~i~~~a~~--d~~~p~~~~~H~YFnl~~~~~~~i~~~~L~i~a~~~~~-~d~~~iPtg~~~~v~~ 221 (344)
T 1snz_A 145 ELKVWVTYTLDGGELIVNYRAQA--SQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLP-VDETLIPTGEVAPVQG 221 (344)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEE--SSCEECBCEECCCBCTTCTTCSCCTTCEEEECEEEECC-BCTTSCBCSCCEECTT
T ss_pred EEEEEEEEEEcCCEEEEEEEEEe--CCceEEeccccceEecCCCCCCcccCEEEEEECCeEEE-eCCCCcccCceecCCC
Confidence 99999999999889999999997 899999999999999974 22 6666532111 3444445543 111
Q ss_pred c-c-ccceeecC--------CCcceEEeCCC-----CeEEE-eCCCCCeEEEEeCCCCcEEEeCCCCC------C-CCCC
Q 027452 136 K-E-ERDRVTFP--------GFVDCIYLDAP-----SVVHL-DNGLGDTITIRNTNWSDAVLWNPHMQ------M-EACY 192 (223)
Q Consensus 136 ~-~-~~~~~~~~--------~~~D~~y~~~~-----~~~~l-~~~~~~~l~i~~~~~~~~vvwtp~~~------~-~~~~ 192 (223)
+ . ......+. +++|++|+... ..++| ++.++++|+|.++ +|++|||||+.. + ...|
T Consensus 222 t~~df~~~~~l~~~~~~~~~~g~D~~f~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~~~~~~~~~~~~y 300 (344)
T 1snz_A 222 TAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTT-QPGVQFYTGNFLDGTLKGKNGAVY 300 (344)
T ss_dssp STTCCSSCEEHHHHHHHTTCCCCEEEEEECCCSSCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTCEEEEECGGGCEE
T ss_pred CcccccCCcCcChhhcccccCCCCeEEEccCCCCCceEEEEEeCCCCcEEEEEeC-CCeEEEECCCCCCccccCCCCccc
Confidence 1 0 01111221 24899997642 25788 8989999999997 999999998521 1 1111
Q ss_pred --CceEEeccCce---------eceEECCCCeEEEEEEEEe
Q 027452 193 --KDFVCVENAKI---------GKVQLEPEQSWTAKQHLSI 222 (223)
Q Consensus 193 --~~~vCiEP~~~---------~~~~L~pGe~~~~~~~i~v 222 (223)
+.|||||||.. +.++|+|||+++.+++|++
T Consensus 301 ~~~~~vclEp~~~pda~n~~~~~~~~L~pGe~~~~~~~~~f 341 (344)
T 1snz_A 301 PKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTWFKF 341 (344)
T ss_dssp ETTSCBEEEEESCTTGGGCTTSCCCEECTTSCEEEEEEEEE
T ss_pred CCCCEEEEeCcCCCCcccCCCCCCeEECCCCEEEEEEEEEE
Confidence 57999999963 2379999999999999876
No 12
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=100.00 E-value=2.8e-33 Score=237.24 Aligned_cols=201 Identities=11% Similarity=0.115 Sum_probs=148.4
Q ss_pred ccEEcCCCCC---------C----------CCCCceeE---eeCCcEEEeeecCCCccEEEEEEecCccccccCCcceEE
Q 027452 13 VPHCFPQFGP---------G----------PMQQHGFA---RNMDWSILDSENVEGNPVITLELKDGPYSRAMWDFSFQA 70 (223)
Q Consensus 13 ~PvlfP~~g~---------~----------~~~~HGf~---r~~~w~v~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l 70 (223)
-++++|+.|| | ++++|||+ +++.|++++.+ +++|+|++.+.+ +.++|||+|++
T Consensus 67 G~~lgp~anRI~~g~f~~~G~~y~L~~N~~~n~lHGg~~g~~~~~W~v~~~~----~~~v~l~l~s~d-~~~gyPg~~~~ 141 (339)
T 1lur_A 67 GKTVGRVANRIKNSTLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHA----PESVSFSVRANE-QDDGLPGDAKI 141 (339)
T ss_dssp TCEECSBCSEEGGGEEEETTEEEECCCSBTTBEETTCTTSGGGSBCEEEEEE----TTEEEEEEEEEH-HHHSSSSEEEE
T ss_pred ccEecCcCCeecCCEEEECCEEEECCCCCCCcccCCCCcccccceeeEEEcc----CCEEEEEEECCC-cCCCCCeEEEE
Confidence 3678899988 1 23499999 48999998776 678999998866 45899999999
Q ss_pred EEEEEEe-CCcEEEEEEEEeCCCCcEEEeeeccceEEEee---ce---eEEecccCCeeecCCCCCCCC---CCCc-c-c
Q 027452 71 LFKVILN-TKSISTELTITNTDNKPFSFSSALHTYFRASV---TG---ASVKGLKGCKTLNKDPDPKNP---MEGK-E-E 138 (223)
Q Consensus 71 ~~~y~L~-~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~---~~---~~i~~~~~~~~~d~~~~~~~~---~~~~-~-~ 138 (223)
+++|+|+ +++|+|++++ +++++|||++|+|||||+++ +. +++++..... +|...+|++. +.++ . .
T Consensus 142 ~vtY~L~~~~~L~i~~~a--~~d~~tp~~lg~HpYFnl~~~~~i~~~~L~i~a~~~~~-~d~~~iPtg~~~~v~~t~~Df 218 (339)
T 1lur_A 142 DVTYTVNDRNQLIIEHHA--TCDTPGLLALTNHAYWNLDGSDTVAEHFLEMEADEFVE-VDDTFCPTGAIRSVTDTGFDF 218 (339)
T ss_dssp EEEEEECTTSEEEEEEEE--ECSSCEECBCEECCEECSSCCSCSTTCEEEECEEEEEE-ECTTSCEEEEEEECTTSTTCC
T ss_pred EEEEEECCCCeEEEEEEE--eCCCCeEEeeeccceEECCCCCcccCEEEEEECCEEEE-eCCCCccCCCEEccCCCcccc
Confidence 9999998 6899999999 48999999999999999985 22 7776532212 3544444432 1111 0 0
Q ss_pred cceeecCC---------CcceEEeCC---C-----CeEEE-eCCCCCeEEEEeCCCCcEEEeCCCCC----C-CC--CCC
Q 027452 139 RDRVTFPG---------FVDCIYLDA---P-----SVVHL-DNGLGDTITIRNTNWSDAVLWNPHMQ----M-EA--CYK 193 (223)
Q Consensus 139 ~~~~~~~~---------~~D~~y~~~---~-----~~~~l-~~~~~~~l~i~~~~~~~~vvwtp~~~----~-~~--~~~ 193 (223)
.....+.. ++|++|+.. . ..++| ++.+++.|+|.++ +|++||||++.. + +. ..+
T Consensus 219 ~~~~~l~~~~~~~~~~~~~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~~~~g~~g~~y~~~ 297 (339)
T 1lur_A 219 RSGKQLKESGKDAEELLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTS-YPVIHLYASKFLDCKGKKGEHYKAN 297 (339)
T ss_dssp TTCEETTCSCCCSSCCCCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEES-SSEEEEECCTTCCEECGGGCEECTT
T ss_pred cCceecCchhcccccCCCCccEEEeCCCCCCcccceEEEEEECCCCcEEEEEeC-CCEEEEECCCCccccCCCCcccCCC
Confidence 12233332 789999653 2 35788 8889999999997 999999998621 0 11 124
Q ss_pred ceEEeccCce---------eceEECCCCeEEEEEEEEe
Q 027452 194 DFVCVENAKI---------GKVQLEPEQSWTAKQHLSI 222 (223)
Q Consensus 194 ~~vCiEP~~~---------~~~~L~pGe~~~~~~~i~v 222 (223)
.|||||||+. +.++|+|||+++.+++|++
T Consensus 298 ~~vclEp~~~pDa~n~~~~~~~~L~pGe~~~~~~~~~f 335 (339)
T 1lur_A 298 KALAIEPQFHSAAPNFDHFPDVSLRPGDHYCQEIVYTF 335 (339)
T ss_dssp CCEEEEEESCTTGGGCTTSCCCEECTTCCEEEEEEEEE
T ss_pred CEEEEeccCCCCccCCCCCCCeEECCCCEEEEEEEEEE
Confidence 6999999973 2389999999999999876
No 13
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=99.98 E-value=1.1e-31 Score=227.89 Aligned_cols=198 Identities=12% Similarity=0.145 Sum_probs=146.6
Q ss_pred cEEcCCCCC---C---------CC-------CCceeE---eeCCcEEEeeecCCCcc---EEEEEEecCccccccCCcce
Q 027452 14 PHCFPQFGP---G---------PM-------QQHGFA---RNMDWSILDSENVEGNP---VITLELKDGPYSRAMWDFSF 68 (223)
Q Consensus 14 PvlfP~~g~---~---------~~-------~~HGf~---r~~~w~v~~~~~~~~~~---~v~l~l~~~~~~~~~~P~~f 68 (223)
|+|||+.|| | .+ ++||++ |++.|++++.+ ++ +|+|++.+.+ +.++|||+|
T Consensus 63 ~~lgp~anRI~~g~f~~~G~~y~L~~N~~~n~lHGg~~g~~~~~W~v~~~~----~~~~~~v~l~l~s~d-~~~gyPg~~ 137 (347)
T 1nsx_A 63 ATVGPTAGRIKDGLVKISGKDYILNQNEGPQTLHGGEESIHTKLWTYEVTD----LGAEVQVKFSLVSND-GTNGYPGKI 137 (347)
T ss_dssp CEECSBCSEEGGGEEEETTEEEECCCCBTTBEETTSTTCGGGSBCEEEEEE----CSSEEEEEEEEEECT-TGGGCCSCE
T ss_pred eEEcccCCcccCCEEEECCEEEEccCCCCCcccCCCCcccccceEEEEEcc----CCcceEEEEEEECCC-ccCCCCeEE
Confidence 799999998 1 34 499998 99999998775 44 8999999874 568999999
Q ss_pred EEEEEEEEe-CCcEEEEEEEEeCCCCcEEEeeeccceEEEee-----ce---eEEecccCCeeecCCC-CCCCC---CCC
Q 027452 69 QALFKVILN-TKSISTELTITNTDNKPFSFSSALHTYFRASV-----TG---ASVKGLKGCKTLNKDP-DPKNP---MEG 135 (223)
Q Consensus 69 ~l~~~y~L~-~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~-----~~---~~i~~~~~~~~~d~~~-~~~~~---~~~ 135 (223)
+++++|+|+ +++|+|+++++ ++++|||++|+|||||+++ +. +++++..... +|... +|++. +.+
T Consensus 138 ~~~vtY~L~~~~~L~i~~~a~--~d~~tp~nlg~HpYFnl~g~~~~~i~~~~L~i~a~~~~~-~d~~~~iPtG~~~~v~g 214 (347)
T 1nsx_A 138 EMSVTHSFDDDNKWKIHYEAI--SDKDTVFNPTGNVYFNLNGDASESVENHGLRLAASRFVP-LKDQTEIVRGDIVDIKN 214 (347)
T ss_dssp EEEEEEEEETTSEEEEEEEEE--ESSCEECBCEECCEECTTSSTTSCGGGSEEEECEEEECC-BCSTTCCBCSCCEECTT
T ss_pred EEEEEEEECCCCeEEEEEEEE--cCCCeEEeeeccceEecCCCCCCceeceEEEEECCeEEE-ECCCCcCcCCCeEecCC
Confidence 999999998 68999999997 8999999999999999974 22 7776532222 45544 55543 211
Q ss_pred c--cccceeecC-------------CCcceEEeCCC-----CeEEE-eCCCCCeEEEEeCCCCcEEEeCCCCC-----C-
Q 027452 136 K--EERDRVTFP-------------GFVDCIYLDAP-----SVVHL-DNGLGDTITIRNTNWSDAVLWNPHMQ-----M- 188 (223)
Q Consensus 136 ~--~~~~~~~~~-------------~~~D~~y~~~~-----~~~~l-~~~~~~~l~i~~~~~~~~vvwtp~~~-----~- 188 (223)
+ .......+. +++|++|+.+. ..++| + +++.|+|.++ +|++||||++.. +
T Consensus 215 t~~df~~~~~l~~~~~~~~~~~~~~~g~D~~f~l~~~~~~~~~a~l~~--sg~~l~v~t~-~p~lqvyt~~~~~~g~~~~ 291 (347)
T 1nsx_A 215 TDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQLGLDKEQARLTL--DDTSISVFTD-QPSIVIFTANFGDLGTLYH 291 (347)
T ss_dssp STTCCSSCEEHHHHHHCCCHHHHHHTSCEEEEEESSCBTTSCCEEEEE--TTEEEEEEES-SSEEEEECCCCTTCCCEET
T ss_pred CcccccCCcccchhhccchhhhcccCCCCEEEEecCCCCceEEEEEEe--CCCEEEEEeC-CCEEEEECCCCCccccccC
Confidence 1 111112221 26899997532 35788 6 7899999997 999999997621 0
Q ss_pred --CCCCCceEEeccCce---------eceEECCCCeEEEEEEEEe
Q 027452 189 --EACYKDFVCVENAKI---------GKVQLEPEQSWTAKQHLSI 222 (223)
Q Consensus 189 --~~~~~~~vCiEP~~~---------~~~~L~pGe~~~~~~~i~v 222 (223)
+...+.+||||||+. +.++|+|||+++.++++++
T Consensus 292 g~~~~~~~~vclEpq~~pDa~n~~~~~~~~L~pGe~~~~~~~~~f 336 (347)
T 1nsx_A 292 EKKQVHHGGITFECQVSPGSEQIPELGDISLKAGEKYQATTIYSL 336 (347)
T ss_dssp TEECCTTCCEECEEESCTTTTTCGGGCCCEECTTCEEEEEEEEEE
T ss_pred CcccCCcCEEEEeccCCCCccCCCCCCCeEECCCCEEEEEEEEEE
Confidence 111245699999973 2389999999999998875
No 14
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=99.97 E-value=1e-30 Score=220.55 Aligned_cols=203 Identities=15% Similarity=0.138 Sum_probs=147.9
Q ss_pred cEEcCCCCC---C----------------CCCCceeE--eeCCcEEEeeecCCCccEEEEEEecCccccccCCcceEEEE
Q 027452 14 PHCFPQFGP---G----------------PMQQHGFA--RNMDWSILDSENVEGNPVITLELKDGPYSRAMWDFSFQALF 72 (223)
Q Consensus 14 PvlfP~~g~---~----------------~~~~HGf~--r~~~w~v~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ 72 (223)
++|+|+.|| | ++++||++ +++.|+++... +.++++|+|++.+.+ ..++|||+|++++
T Consensus 69 ~~lgp~anRI~~g~f~~~G~~y~L~~N~g~n~LHGg~g~~~~~W~v~~~~-~~~~~~v~l~l~s~d-~~~gyPg~~~~~v 146 (338)
T 3imh_A 69 GTVGRIAGRVRAGQWKHGNEIHQLPLNDGDNHIHGGIGTDMHVWDFRPSC-DSEHARVDLTLFDPD-GNNDYPGNLKLHA 146 (338)
T ss_dssp CEECSBCSEEGGGEEEETTEEEECCCCBTTBEETTSSCGGGSBCEEEEEE-CSSEEEEEEEEEECT-TGGGCCSCEEEEE
T ss_pred eEEEeeCCEecCCEEEECCEEEECCCCCCCcCCCCCCCcCCceEEEEeee-ecCCCEEEEEEECCc-cccCCCeEEEEEE
Confidence 599999998 1 34559998 78999995432 233678999998865 4579999999999
Q ss_pred EEEEeC-CcEEEEEEEEeCCCCcEEEeeeccceEEEee-c---eeEEecccCCeeecCCCCCCCCC---CCc--cccce-
Q 027452 73 KVILNT-KSISTELTITNTDNKPFSFSSALHTYFRASV-T---GASVKGLKGCKTLNKDPDPKNPM---EGK--EERDR- 141 (223)
Q Consensus 73 ~y~L~~-~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~-~---~~~i~~~~~~~~~d~~~~~~~~~---~~~--~~~~~- 141 (223)
+|+|++ ++|+|+++++ ++++|||++|+|||||+++ + .+++++..... +|...+|++.+ .++ +-+..
T Consensus 147 tY~L~~~~~L~i~~~a~--~d~~tp~nlg~HpYFnL~g~i~~~~L~i~a~~~~~-~d~~~iPTG~~~~v~gt~~DFr~~~ 223 (338)
T 3imh_A 147 RYELDNENNLHYLLEAV--SDKLTIFNPVNHTYFNLGERAEDLNLQMNADYYLP-VDEAGLPDRGMAEVAGTAFDFRKTK 223 (338)
T ss_dssp EEEEETTSEEEEEEEEE--ESSSEECBCEECCEECTTSCGGGCEEEECEEEECC-BCTTSSBSSCCEECTTSTTCCSSCE
T ss_pred EEEEecCCeEEEEEEEe--cCCCeEEEEeeCCEEeCCCCcCCeEEEEEcCcEEE-eCCccCCcCceecCCCCcccCCCCe
Confidence 999996 6799999998 8999999999999999974 2 27777643222 46666666532 211 00111
Q ss_pred ------------eecCCCcceEEeCCC--CeEEEeCCCCCeEEEEeCCCCcEEEeCCCCCCC------CCCCceEEeccC
Q 027452 142 ------------VTFPGFVDCIYLDAP--SVVHLDNGLGDTITIRNTNWSDAVLWNPHMQME------ACYKDFVCVENA 201 (223)
Q Consensus 142 ------------~~~~~~~D~~y~~~~--~~~~l~~~~~~~l~i~~~~~~~~vvwtp~~~~~------~~~~~~vCiEP~ 201 (223)
+...+++|++|+... ..++|. .+|++|+|.++ .|.+||||++.... ...+..||||||
T Consensus 224 ~ig~~~~~~~~q~~~~~g~Dh~f~l~~~~~~a~l~-~sg~~l~v~t~-~p~~q~YTgn~l~~~g~g~~~~~~~g~clE~q 301 (338)
T 3imh_A 224 RIGDALNSDDSQIKLRNGLDHPFILNGNNPAALLS-SNKHRLIVKTN-APALVLYAGNHFNHTGIVNNIGQYDGITFEAQ 301 (338)
T ss_dssp EHHHHHTSCCHHHHHHTSCEEEEEECSCSCSEEEE-CSSEEEEEEES-SSEEEEECCTTCCSBTTBTTCCTTSCEECEEE
T ss_pred EcchhhhccchhhcccCCCCCceeecCCceEEEEE-CCCeEEEEEeC-CCEEEEeCCCCcCCCCCCcccCccCEEEEEcc
Confidence 111236999997642 257772 27899999995 89999999864211 112468999999
Q ss_pred ce-------eceEECCCCeEEEEEEEEeC
Q 027452 202 KI-------GKVQLEPEQSWTAKQHLSIN 223 (223)
Q Consensus 202 ~~-------~~~~L~pGe~~~~~~~i~v~ 223 (223)
.. +.++|+|||+++.++.++++
T Consensus 302 ~~P~n~~~f~~~vL~pGe~y~~~t~y~f~ 330 (338)
T 3imh_A 302 CPPAEGNDLGQITLLPFEKFKRTVDWKFE 330 (338)
T ss_dssp SCCCSSSCCGGGEECTTCCEEEEEEEEEE
T ss_pred CCCCCCCCCCCeEECCCCEEEEEEEEEEC
Confidence 74 24899999999999998764
No 15
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=99.97 E-value=2.2e-30 Score=238.33 Aligned_cols=209 Identities=12% Similarity=0.055 Sum_probs=150.0
Q ss_pred cccEEcCCCCC---C----------------CCCCceeEe---eCCcEEEeeec-CCCccEEEEEEecCccccccCCcce
Q 027452 12 GVPHCFPQFGP---G----------------PMQQHGFAR---NMDWSILDSEN-VEGNPVITLELKDGPYSRAMWDFSF 68 (223)
Q Consensus 12 G~PvlfP~~g~---~----------------~~~~HGf~r---~~~w~v~~~~~-~~~~~~v~l~l~~~~~~~~~~P~~f 68 (223)
.-++++|+.|| | ++.+||+++ ++.|++...+. +++..+++|++.++++ .++|||+|
T Consensus 423 ~g~~l~~~~nRi~~g~f~~~G~~y~l~~n~~~~~lHG~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~gyP~~~ 501 (699)
T 1z45_A 423 IGATIGRYANRISKGKFSLCNKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQNPSKDVFTAEYMLIDNEK-DTEFPGDL 501 (699)
T ss_dssp TTCEECSBCSEEGGGEEEETTEEEECCCCBTTBEETTGGGCGGGSBCEEEEEEEEETTEEEEEEEEEECGG-GSSSSSEE
T ss_pred cccccCcccCeecCcEEEECCEEEEccCCCCCcccCCCccccceeecceeeeccCCCCcceEEEEEECCCc-CCCCCceE
Confidence 34788999998 1 234699994 89999843211 1111379999998876 68999999
Q ss_pred EEEEEEEEe--CCcEEEEEEEEeCCCCcEEEeeeccceEEEee-----ce---eEEecccCCeeecCCCCCCCC---CCC
Q 027452 69 QALFKVILN--TKSISTELTITNTDNKPFSFSSALHTYFRASV-----TG---ASVKGLKGCKTLNKDPDPKNP---MEG 135 (223)
Q Consensus 69 ~l~~~y~L~--~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~-----~~---~~i~~~~~~~~~d~~~~~~~~---~~~ 135 (223)
+++++|+|+ +++|+|+++++|+++++|||++|+|||||+++ +. +++++..... .|....|++. +.+
T Consensus 502 ~~~v~y~L~~~~~~L~i~~~~~n~~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l~~~a~~~~~-~d~~~iptg~~~~v~~ 580 (699)
T 1z45_A 502 LVTIQYTVNVAQKSLEIVYKGKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVD-VDKNMIPTGNIVDREI 580 (699)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEESSEEECBCEECCEECTTTTSCSSSTTEEEEESCCEEEE-ECTTSCEEEEEEECSC
T ss_pred EEEEEEEEecCCCEEEEEEEEEecCCCCceecccccceEeecCCCCCCccccEEEEecCeEEe-cCCCCCCCCCcccCcC
Confidence 999999999 89999999999999999999999999999973 22 7776532211 3444444442 211
Q ss_pred c---c-ccceeecC-CCcceEEeCCC---------------CeEEE-eCCCCCeEEEEeCCCCcEEEeCCCCCCC-CCCC
Q 027452 136 K---E-ERDRVTFP-GFVDCIYLDAP---------------SVVHL-DNGLGDTITIRNTNWSDAVLWNPHMQME-ACYK 193 (223)
Q Consensus 136 ~---~-~~~~~~~~-~~~D~~y~~~~---------------~~~~l-~~~~~~~l~i~~~~~~~~vvwtp~~~~~-~~~~ 193 (223)
+ . ....+... .++|++|+... ..++| ++.+++.|+|.++ +|++||||++...+ ...+
T Consensus 581 t~~df~~~~~l~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~~yt~~~~~~~~~~~ 659 (699)
T 1z45_A 581 ATFNSTKPTVLGPKNPQFDCCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLST-EPTYQFYTGDFLSAGYEAR 659 (699)
T ss_dssp CBTTSSSCEEECSSCCCCEEEEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTCCTTCCTT
T ss_pred CCcccCCcccccccCCCCCcceEccCccccccccccccccceeEEEEcCCCCCEEEEEEC-CCEEEEEeCCCCCCCCCCC
Confidence 1 0 11112222 37999997642 23788 8989999999996 99999999853111 1125
Q ss_pred ceEEeccCce----------eceEECCCCeEEEEEEEEeC
Q 027452 194 DFVCVENAKI----------GKVQLEPEQSWTAKQHLSIN 223 (223)
Q Consensus 194 ~~vCiEP~~~----------~~~~L~pGe~~~~~~~i~v~ 223 (223)
.+||||||.. +.++|+|||+++.++++++.
T Consensus 660 ~~~clEp~~~pda~n~~~~~~~~~L~pge~~~~~~~~~f~ 699 (699)
T 1z45_A 660 QGFAIEPGRYIDAINQENWKDCVTLKNGETYGSKIVYRFS 699 (699)
T ss_dssp SCEEEEEESCSSGGGCTTTGGGGEEETTCEEEEEEEEEEC
T ss_pred CEEEEecCCCCCccCcccCCCCcEECCCCEEEEEEEEEEC
Confidence 7899999952 12799999999999999874
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.86 E-value=1.4e-21 Score=167.64 Aligned_cols=192 Identities=14% Similarity=0.117 Sum_probs=124.2
Q ss_pred CCCCceeEeeCCcEEEeeec-CCCccEEEEEEecCccccccCCcceEEEEEEEEeCCcEEEEEEEEeCCCCcEEEeeecc
Q 027452 24 PMQQHGFARNMDWSILDSEN-VEGNPVITLELKDGPYSRAMWDFSFQALFKVILNTKSISTELTITNTDNKPFSFSSALH 102 (223)
Q Consensus 24 ~~~~HGf~r~~~w~v~~~~~-~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~H 102 (223)
.+++||++++.+|+.+..+. +++...++++....+....+|||.++.+++|+|.+++|+|+.+|+|.|+++|||.+++|
T Consensus 132 ~~~LHG~~~~~pa~~~~~~~~~~~~~~i~l~g~~~~~~~~G~~~~l~~~i~~~l~~~~l~i~~~VtN~g~~p~P~~~~~H 211 (384)
T 3ty1_A 132 IYTLHGKAGNTPASLVEVEVADSAPYEIRIRGLVKESTFKKADLQTLTELRYVPGSNSFSLHDVLTNHADYPHDYQIIYH 211 (384)
T ss_dssp EECTTCSGGGSCCSEEEEEEESSTTCCEEEEEEEEEEETTTEEEEEEEEEEECTTCSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cccccccccCCCcceeEEEecCCCceEEEEEEEEEEeeeccCCEEEEEEEEEEeCCCEEEEEEEEEECCCCCCchheecc
Confidence 47999999999966533221 12245677776666555678999999999999989999999999999999999999999
Q ss_pred ceEEEe----eceeEEecccCCeeecCCCCCCCCCCCccccceeecCCCcceEEe-C----CCC--eEEE-eCCCCCeEE
Q 027452 103 TYFRAS----VTGASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYL-D----APS--VVHL-DNGLGDTIT 170 (223)
Q Consensus 103 pyF~~~----~~~~~i~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~D~~y~-~----~~~--~~~l-~~~~~~~l~ 170 (223)
|||..+ +.++.++...... .+... ...+...... .-+....-+.+|. + ..+ .+.| ++..+..+.
T Consensus 212 ~nfg~Pll~~g~rl~~p~~~~~p-~~~~~--~~~l~~~~~~-~~p~~~~~E~vf~~d~~~d~~G~~~~~l~n~~~g~~~~ 287 (384)
T 3ty1_A 212 SNFGTPILEEGARFLAPISSISP-FNDYA--KSGLKTWQTY-QGPTKDFDEMVFNIQPLADENHQTLAAVVNKAGDKGAS 287 (384)
T ss_dssp EEECTTTCCTTCEEECCEEEEEE-SSGGG--GGGSTTTTBC-CCCCTTCCCEEEEEEECCCTTSEEEEEEECSSSSCEEE
T ss_pred cccCCCccCCCcEEEeccceecc-ccccc--cccccchhhc-cCCCCCCCceEEEEeccccCCCceEEEEEecCCCcEEE
Confidence 999875 2224433321111 01000 0000000000 0000111134442 1 233 3667 777888998
Q ss_pred EEe--CCCCcEEEeCCCCCCCCCCCceE-EeccCce-----------ec-eEECCCCeEEEEEEEEe
Q 027452 171 IRN--TNWSDAVLWNPHMQMEACYKDFV-CVENAKI-----------GK-VQLEPEQSWTAKQHLSI 222 (223)
Q Consensus 171 i~~--~~~~~~vvwtp~~~~~~~~~~~v-CiEP~~~-----------~~-~~L~pGe~~~~~~~i~v 222 (223)
++. +.||++++|+.... .+ +.|+ ||||++. +. +.|+|||+++++++|.+
T Consensus 288 l~f~~~~fP~l~~W~~~~~--~~-~gyvl~LEP~T~~p~~~~~~~~~g~l~~L~PGes~~~~~~i~v 351 (384)
T 3ty1_A 288 IQFDTRQLPVLTLWKNTDT--VK-QGYVTGIEPGTSYAYPVTIERKQKRVKQLQPGASAQFDLTYTL 351 (384)
T ss_dssp EEEETTTSCEEEEEEEESC--TT-TCEEEEEEEESSCSSCHHHHHHTTCCEEECTTCEEEEEEEEEE
T ss_pred EEEchHHCCHhHhhcccCC--CC-CccEEEEeCccCCCchhHHHHhCCCeEEECCCCEEEEEEEEEE
Confidence 887 46999999986211 01 3375 9999983 23 99999999999999876
No 17
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=90.62 E-value=0.22 Score=33.48 Aligned_cols=40 Identities=15% Similarity=0.247 Sum_probs=28.4
Q ss_pred EEEeCCcEEEEEEEEeCCCCcEEEeeeccceEEEeeceeEEe
Q 027452 74 VILNTKSISTELTITNTDNKPFSFSSALHTYFRASVTGASVK 115 (223)
Q Consensus 74 y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~~~~~i~ 115 (223)
++|..+.=+++++|+|+||+ |++.|.|-.|.=.+..+.++
T Consensus 13 I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N~aL~FD 52 (101)
T 4ep8_B 13 IALNTGRATCRVVVENHGDR--PIQVGSHYHFAEVNPALKFD 52 (101)
T ss_dssp EECSTTCCEEEEEEEECSSS--CEEEETTSCGGGSCTTEESC
T ss_pred EEEcCCCCEEEEEEEeCCCc--ceEEccccChhHcCcceeec
Confidence 46676677999999999998 56677887774222225554
No 18
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=87.87 E-value=1.5 Score=30.67 Aligned_cols=34 Identities=12% Similarity=0.264 Sum_probs=27.5
Q ss_pred ceEEEEEEEEeCCcEEEEEEEEeCCCCcEEEeee
Q 027452 67 SFQALFKVILNTKSISTELTITNTDNKPFSFSSA 100 (223)
Q Consensus 67 ~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g 100 (223)
...+++++.-.++.+.+.++|+|.++++..+.+.
T Consensus 6 ~l~~~v~~~~~g~~v~~~ltv~N~s~~~v~l~f~ 39 (120)
T 3isy_A 6 EVVLSIDAIQEPEQIKFNMSLKNQSERAIEFQFS 39 (120)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEECSSSCEEEEES
T ss_pred EEEEEEeeccCCCeEEEEEEEEcCCCCcEEEEeC
Confidence 4566777776788999999999999998777543
No 19
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=87.64 E-value=0.36 Score=33.80 Aligned_cols=40 Identities=15% Similarity=0.212 Sum_probs=28.5
Q ss_pred EEEeCCcEEEEEEEEeCCCCcEEEeeeccceEEEeeceeEEe
Q 027452 74 VILNTKSISTELTITNTDNKPFSFSSALHTYFRASVTGASVK 115 (223)
Q Consensus 74 y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~~~~~i~ 115 (223)
++|..+.=+++++|+|+||+ |++.|-|-.|-=.+..|.++
T Consensus 19 I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N~aL~FD 58 (126)
T 4ubp_B 19 IEINAGREKTTIRVSNTGDR--PIQVGSHIHFVEVNKELLFD 58 (126)
T ss_dssp EETTTTSCEEEEEEEECSSS--CEEEETTSCGGGSCTTEESC
T ss_pred EEeCCCCcEEEEEEEeCCCC--CEEEccccchhhcCchhhcc
Confidence 56776677899999999998 56677887774222226555
No 20
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=87.64 E-value=0.36 Score=33.80 Aligned_cols=40 Identities=15% Similarity=0.212 Sum_probs=28.5
Q ss_pred EEEeCCcEEEEEEEEeCCCCcEEEeeeccceEEEeeceeEEe
Q 027452 74 VILNTKSISTELTITNTDNKPFSFSSALHTYFRASVTGASVK 115 (223)
Q Consensus 74 y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~~~~~i~ 115 (223)
++|..+.=+++++|+|+||+ |++.|-|-.|-=.+..|.++
T Consensus 19 I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N~aL~FD 58 (126)
T 4ac7_B 19 IEINAGREKTTIRVSNTGDR--PIQVGSHIHFVEVNKELLFD 58 (126)
T ss_dssp EETTTTSCEEEEEEEECSSS--CEEEETTSCGGGSCTTEESC
T ss_pred EEeCCCCcEEEEEEEeCCCC--CEEEccccchhhcCchhhcc
Confidence 56776677899999999998 56677887774222226555
No 21
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=83.63 E-value=10 Score=34.75 Aligned_cols=98 Identities=15% Similarity=0.207 Sum_probs=57.9
Q ss_pred cEEcCCCCCCCC--------CCceeEeeCCcEEEeeecC----------------CCccEEEEEEecCccccccCCcceE
Q 027452 14 PHCFPQFGPGPM--------QQHGFARNMDWSILDSENV----------------EGNPVITLELKDGPYSRAMWDFSFQ 69 (223)
Q Consensus 14 PvlfP~~g~~~~--------~~HGf~r~~~w~v~~~~~~----------------~~~~~v~l~l~~~~~~~~~~P~~f~ 69 (223)
|..||..|.+.. ...| .+...|+..+++.. +++..+++++.+.. ..++
T Consensus 74 ~~~~p~~g~~~~~~pa~~~~~~~g-~~~~~~~y~~~~~~~~k~~~~~lp~~~~~~~~~~~l~i~l~D~~-------~~l~ 145 (720)
T 2yfo_A 74 PQEYPSLGTGDYRNIALNIKNEKG-VESADLLFKSYEIRNGKYRLQGLPAVWADEKEAQTLEIVLADEN-------AQVE 145 (720)
T ss_dssp CBSSCBTTSSCCSCCSEEEECTTS-CBCCCCEEEEEEEEESCCCBTTBCCCCCCTTTEEEEEEEEEETT-------TTEE
T ss_pred hhhcccCCCCCCCCCeEEEEeCCC-CceeeeEEEeEEecCCcccccCCccccccCCCCcEEEEEEEECC-------CCEE
Confidence 446777776311 1234 55566776665521 12345666776532 2668
Q ss_pred EEEEEEEeC--CcEEEEEEEEeCCCCcEEEeeeccceEEEee--ce-eEEecccC
Q 027452 70 ALFKVILNT--KSISTELTITNTDNKPFSFSSALHTYFRASV--TG-ASVKGLKG 119 (223)
Q Consensus 70 l~~~y~L~~--~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~--~~-~~i~~~~~ 119 (223)
++++|++.+ +-++...+++|+|+++.-+.--.-.-+.++. .. +.+.|.|.
T Consensus 146 v~l~y~~~~~~~vi~~~~~i~N~g~~~~~l~~~~s~~l~~~~~~~~l~~~~G~w~ 200 (720)
T 2yfo_A 146 VHLLYGVLEENDVITRSVRIKNTGTGQITIEKAAAACLDFVQGEFDVLRFYGKHA 200 (720)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECSSSCEEEEEEEEEEEEESSCCEEEEEEEEETT
T ss_pred EEEEEEEECCCCEEEEEEEEEECCCCCEEEeeeecccccCCCCCCEEEeeeCCCc
Confidence 999999985 4699999999999987655433332333332 12 45555553
No 22
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=77.94 E-value=15 Score=33.70 Aligned_cols=45 Identities=9% Similarity=0.131 Sum_probs=32.5
Q ss_pred cEEEEEEecCccccccCCcceEEEEEEEEeC--CcEEEEEEEEeCCCCcEEEee
Q 027452 48 PVITLELKDGPYSRAMWDFSFQALFKVILNT--KSISTELTITNTDNKPFSFSS 99 (223)
Q Consensus 48 ~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~--~~L~i~~~v~N~~~~~~p~~~ 99 (223)
..+++++.+.. ..++++++|++.+ +-++...+++|+|+++..+.-
T Consensus 135 ~~l~i~l~D~~-------~~l~v~l~y~~~~~~~~i~~~~~i~N~g~~~~~l~~ 181 (732)
T 2xn2_A 135 QTLIVTLEDKV-------SKLEYDLLYTIYRDRPVIVRSVQVHNHGEEAVYLEK 181 (732)
T ss_dssp EEEEEEEEETT-------TTEEEEEEEEEETTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cEEEEEEEeCC-------CCEEEEEEEEEECCCCEEEEEEEEEECcCCcEEEeE
Confidence 34666665532 2668999999985 458889999999998755543
No 23
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=76.03 E-value=11 Score=29.95 Aligned_cols=48 Identities=10% Similarity=0.248 Sum_probs=33.0
Q ss_pred cEEEEEEecCccccccCCcceEEEEEEEEeCC--cEEEEEEEEeCCCCcEEEeeeccceEEE
Q 027452 48 PVITLELKDGPYSRAMWDFSFQALFKVILNTK--SISTELTITNTDNKPFSFSSALHTYFRA 107 (223)
Q Consensus 48 ~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~--~L~i~~~v~N~~~~~~p~~~g~HpyF~~ 107 (223)
..|+|++...+ ...++.+|+|..+ .+.++++|.|.+++++.. .+|+.+
T Consensus 92 ~~Vtlt~~~~~--------G~~~~ktytf~~~~Y~i~v~~~v~N~s~~~~~~----~~y~~l 141 (280)
T 3bs6_A 92 LQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEI----SSFGQL 141 (280)
T ss_dssp EEEEEEEECTT--------CCEEEEEEEEETTCCEEEEEEEEECCSSSCEEE----EEEEEE
T ss_pred eEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcCCCCceeE----eeeeEE
Confidence 56666665322 3678999999843 488888999999876544 356655
No 24
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=74.36 E-value=1.4 Score=33.94 Aligned_cols=51 Identities=22% Similarity=0.115 Sum_probs=32.8
Q ss_pred cCCcceEE--EEEEEEeCCcEEEEEEEEeCCCCcEEEeeeccceEEEeeceeEEe
Q 027452 63 MWDFSFQA--LFKVILNTKSISTELTITNTDNKPFSFSSALHTYFRASVTGASVK 115 (223)
Q Consensus 63 ~~P~~f~l--~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~~~~~i~ 115 (223)
.-|+.+++ .-.++|..+.=+++++|+|+||+ |++.|.|-.|-=.+..+.|+
T Consensus 105 ~~PGei~~~~~g~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N~aL~FD 157 (225)
T 3qga_A 105 FKAGEIKFASDKDIELNAGKEITELKVTNKGPK--SLHVGSHFHFFEANRALEFD 157 (225)
T ss_dssp CCTTCEECSCSCCEETTTTCCCEEEEEEECSSS--CEEEETTSCGGGSCTTEESC
T ss_pred CCCCeEeccCCCceecCCCCceEEEEEEECCCC--ceeeccccchhhcCchhhcc
Confidence 35775521 12356666667899999999999 56677887774222226555
No 25
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=72.90 E-value=22 Score=32.58 Aligned_cols=66 Identities=12% Similarity=0.172 Sum_probs=43.5
Q ss_pred ccEEEEEEecCccccccCCcceEEEEEEEEeC--CcEEEEEEEEeCCCCcEEEeeeccceEEEeec--e-eEEecccC
Q 027452 47 NPVITLELKDGPYSRAMWDFSFQALFKVILNT--KSISTELTITNTDNKPFSFSSALHTYFRASVT--G-ASVKGLKG 119 (223)
Q Consensus 47 ~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~--~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~~--~-~~i~~~~~ 119 (223)
..+++++|.+.. ..+++++.|++-+ +-++...+|+|.|+++.-+.-..-.-+.++.. . +.+.|.|.
T Consensus 130 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~~s~~l~~~~~~~~~~~~~g~w~ 200 (729)
T 4fnq_A 130 AETLEIVLGDAL-------IGLEVTLQYTAYEKWNVITRAARFENKGGERLKLLRALSMSVDFPTADYDWIHLPGAWG 200 (729)
T ss_dssp EEEEEEEEEETT-------TTEEEEEEEEEESSSSEEEEEEEEEECSSSCEEEEEEEEEEEEESCCCEEEEEEECCTT
T ss_pred ceEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeEeeeecCcCCCCcceEEEccCCcc
Confidence 445666666532 2678999999964 56888899999999987665444444444432 2 56666554
No 26
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=72.16 E-value=4.2 Score=33.83 Aligned_cols=28 Identities=25% Similarity=0.336 Sum_probs=23.9
Q ss_pred EEEEEEeCCcEEEEEEEEeCCCCcEEEe
Q 027452 71 LFKVILNTKSISTELTITNTDNKPFSFS 98 (223)
Q Consensus 71 ~~~y~L~~~~L~i~~~v~N~~~~~~p~~ 98 (223)
..+|++-+.+|+++++|+|.|+++...+
T Consensus 256 ~A~Y~vpgR~l~~~~~VtN~g~~pvrlg 283 (382)
T 1yew_A 256 DATYRVPGRAMRMKLTITNHGNSPIRLG 283 (382)
T ss_dssp EEEEESSCSEEEEEEEEEECSSSCEEEE
T ss_pred ccEEecCCcEEEEEEEEEcCCCCceEee
Confidence 4468888999999999999999987654
No 27
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=71.49 E-value=1.5 Score=33.98 Aligned_cols=51 Identities=8% Similarity=0.038 Sum_probs=32.9
Q ss_pred cCCcceEEE-EEEEEeCCcEEEEEEEEeCCCCcEEEeeeccceEEEeeceeEEe
Q 027452 63 MWDFSFQAL-FKVILNTKSISTELTITNTDNKPFSFSSALHTYFRASVTGASVK 115 (223)
Q Consensus 63 ~~P~~f~l~-~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~~~~~i~ 115 (223)
.-|+.+... -.+.|..+.=+++++|+|+||+ |++.|.|-.|-=.+..+.|+
T Consensus 106 miPGei~~~~g~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N~aL~FD 157 (238)
T 1e9y_A 106 LVPGELFLKNEDITINEGKKAVSVKVKNVGDR--PVQIGSHFHFFEVNRCLDFD 157 (238)
T ss_dssp CCTTCEECCSCEEETTTTCCCCEEEEEECSSS--CEEEETTSCGGGSCTTEESC
T ss_pred CCCCeEEcCCCCeeeCCCCCeEEEEEEeCCCC--ceEeccccchHhcCcccccc
Confidence 357655432 1366766666899999999999 56677787774222225555
No 28
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=69.50 E-value=4.3 Score=34.13 Aligned_cols=28 Identities=7% Similarity=0.156 Sum_probs=23.6
Q ss_pred EEEEEEeCCcEEEEEEEEeCCCCcEEEe
Q 027452 71 LFKVILNTKSISTELTITNTDNKPFSFS 98 (223)
Q Consensus 71 ~~~y~L~~~~L~i~~~v~N~~~~~~p~~ 98 (223)
..+|++-+.+|+++++|+|.|+++..++
T Consensus 290 ~A~Y~vpgR~l~~~~~VtN~g~~pvrlg 317 (419)
T 3rfr_A 290 GGVYKVPGRELTINVKVKNGTSQPVRLG 317 (419)
T ss_dssp EEEEESSSSEEEEEEEEECCSSSCBEEE
T ss_pred ceEEecCCcEEEEEEEEecCCCCceEEe
Confidence 3468888999999999999999987543
No 29
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=66.74 E-value=24 Score=28.83 Aligned_cols=36 Identities=11% Similarity=0.254 Sum_probs=26.4
Q ss_pred eEEEEEEEEeCC--cEEEEEEEEeCCCCcEEEeeeccceEEE
Q 027452 68 FQALFKVILNTK--SISTELTITNTDNKPFSFSSALHTYFRA 107 (223)
Q Consensus 68 f~l~~~y~L~~~--~L~i~~~v~N~~~~~~p~~~g~HpyF~~ 107 (223)
..++.+|+|..+ .+.++++|.|.+++++.. .+|+.+
T Consensus 135 ~~v~k~ytf~~~~Y~i~v~~~v~N~s~~~~~~----~~y~~l 172 (330)
T 3blc_A 135 NTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEI----SSFGQL 172 (330)
T ss_dssp CEEEEEEEEETTCCEEEEEEEEECCSSSCEEE----EEEEEE
T ss_pred eEEEEEEEEcCCceEEEEEEEEEcCCCCccee----eeeeee
Confidence 578999999854 488888999999876543 345544
No 30
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=64.81 E-value=6.8 Score=23.93 Aligned_cols=18 Identities=11% Similarity=0.224 Sum_probs=14.8
Q ss_pred EEEEEEEEeCCcEEEEEE
Q 027452 69 QALFKVILNTKSISTELT 86 (223)
Q Consensus 69 ~l~~~y~L~~~~L~i~~~ 86 (223)
.-+++|+|+++.|.|.++
T Consensus 30 agtvtytldgndleirit 47 (85)
T 2kl8_A 30 AGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp TCEEEEEECSSCEEEEEE
T ss_pred cceEEEEecCCeeEEEEe
Confidence 347899999999988875
No 31
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=61.36 E-value=51 Score=30.31 Aligned_cols=67 Identities=10% Similarity=0.099 Sum_probs=42.4
Q ss_pred ccEEEEEEecCccccccCCcceEEEEEEEEeC--CcEEEEEEEEeCCCCcEEEeeeccceEEEee--ce-eEEecccCC
Q 027452 47 NPVITLELKDGPYSRAMWDFSFQALFKVILNT--KSISTELTITNTDNKPFSFSSALHTYFRASV--TG-ASVKGLKGC 120 (223)
Q Consensus 47 ~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~--~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~--~~-~~i~~~~~~ 120 (223)
...+++.+.+.. ..+++++.|++.+ +-++...+++|.|+++.-..-..=..+.++. .. +.+.|.|..
T Consensus 131 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~~S~~l~~p~~~~~l~~~~G~W~~ 202 (745)
T 3mi6_A 131 AQTLVVSFNDRI-------TGLALDLNYSIFPHQDVIVKSAKFTNPSSEKLVLNRALSSQLDLPDANYDLIQFSGTWAR 202 (745)
T ss_dssp CEEEEEEEEETT-------TCCEEEEEEEEEGGGTEEEEEEEEECCSSSCEEEEEEEEEEEEESCCCCEEEEEEEETTE
T ss_pred CCEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEeeeecccccCCCCCCCEEEECCCcchh
Confidence 456777776542 2568888999874 5678789999999988666433222233332 22 666666643
No 32
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=58.77 E-value=22 Score=32.23 Aligned_cols=32 Identities=6% Similarity=-0.039 Sum_probs=25.8
Q ss_pred CcceEEEEEEEEeCCcEEEEEEEEeCCCCcEE
Q 027452 65 DFSFQALFKVILNTKSISTELTITNTDNKPFS 96 (223)
Q Consensus 65 P~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p 96 (223)
++...++-+|+|++++|.++|+++|.++.++-
T Consensus 540 ~~~~~l~K~~~~~~~~~~v~y~~~~~~~~~~~ 571 (659)
T 1k1x_A 540 KIPARVEKKIELTEDGFIAKYRVLLEKPYKAL 571 (659)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEESSCCCEE
T ss_pred CcceEEEEEEEEcCCEEEEEEEEeeCCCCceE
Confidence 34677888899999999999999998764333
No 33
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.58 E-value=15 Score=25.20 Aligned_cols=39 Identities=21% Similarity=0.097 Sum_probs=32.5
Q ss_pred EEEEEEEeCCcEEEEEEEEeCCCCcEEEeeeccceEEEe
Q 027452 70 ALFKVILNTKSISTELTITNTDNKPFSFSSALHTYFRAS 108 (223)
Q Consensus 70 l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~ 108 (223)
+..-+..-+..-+..+.++|.|+.+..|.+-..+.|.+.
T Consensus 32 l~fg~~~v~~~~~~~~~l~N~g~~~~~f~~~~~~~F~i~ 70 (122)
T 2ys4_A 32 LNFSTCPVKYSTQKILLVRNIGNKNAVFHIKTCRPFSIE 70 (122)
T ss_dssp ECCCSEESSSCEEEEEEEECCSSSCEEEEEECCTTEEEE
T ss_pred eecCCeecCCeEEEEEEEEECCCCCEEEEEecCCCeEEE
Confidence 334455567888999999999999999999999899885
No 34
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=54.30 E-value=9.1 Score=35.76 Aligned_cols=31 Identities=23% Similarity=0.339 Sum_probs=24.8
Q ss_pred EEEEeCCcEEEEEEEEeCCCCcEEEeeeccceE
Q 027452 73 KVILNTKSISTELTITNTDNKPFSFSSALHTYF 105 (223)
Q Consensus 73 ~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpyF 105 (223)
.++|..+.=+++++|+|+||+| ++.|-|-.|
T Consensus 143 ~~~~~~~~~~~~~~v~~~~~r~--~~v~sh~hf 173 (840)
T 4gy7_A 143 CLTLNIGRKAVILKVTSKGDRP--IQVGSHYHF 173 (840)
T ss_dssp EEECSCSCEEEEEEEEECCSSC--EEEETTSCG
T ss_pred ceEecCCCceEEEEEEeCCCCc--eEeccccch
Confidence 4677777789999999999995 566777666
No 35
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=52.22 E-value=25 Score=23.72 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=24.4
Q ss_pred EEEEEEEe---CCcEEEEEEEEeCCCCcEEEeeeccceEEEe
Q 027452 70 ALFKVILN---TKSISTELTITNTDNKPFSFSSALHTYFRAS 108 (223)
Q Consensus 70 l~~~y~L~---~~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~ 108 (223)
++++|++. +++...+++|+|.++.++- +|---|.++
T Consensus 3 c~v~y~v~~~W~~Gf~~~vtVtN~g~~~i~---gWtv~~~~p 41 (107)
T 3ndz_E 3 VEVTYAITNSWGSGASVNVTIKNNGTTPIN---GWTLKWTMP 41 (107)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEECSSSCEE---SCEEEEECC
T ss_pred cEEEEEEcccCCCCEEEEEEEEeCCCCccc---CcEEEEEcC
Confidence 35566653 5778889999999988753 455555554
No 36
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=38.76 E-value=28 Score=24.04 Aligned_cols=17 Identities=12% Similarity=0.133 Sum_probs=14.4
Q ss_pred EEEEEEEeCCcEEEEEE
Q 027452 70 ALFKVILNTKSISTELT 86 (223)
Q Consensus 70 l~~~y~L~~~~L~i~~~ 86 (223)
-+++|+|+++.|.|.++
T Consensus 32 gtvtytl~gn~l~i~it 48 (170)
T 4hhu_A 32 GTVTYTLSGNRLVIVIT 48 (170)
T ss_dssp CEEEEEEETTEEEEEEE
T ss_pred ceEEEEEeCCEEEEEEe
Confidence 48899999999888775
No 37
>1so9_A Cytochrome C oxidase assembly protein CTAG; immunoglobulin-like fold, copper protein, structural proteomics in europe, spine; NMR {Sinorhizobium meliloti} SCOP: b.146.1.1 PDB: 1sp0_A
Probab=37.01 E-value=25 Score=25.83 Aligned_cols=48 Identities=10% Similarity=0.150 Sum_probs=32.7
Q ss_pred cEEEEEEecCccccccCCcceEEEEE-EEEe-CCcEEEEEEEEeCCCCcEEE
Q 027452 48 PVITLELKDGPYSRAMWDFSFQALFK-VILN-TKSISTELTITNTDNKPFSF 97 (223)
Q Consensus 48 ~~v~l~l~~~~~~~~~~P~~f~l~~~-y~L~-~~~L~i~~~v~N~~~~~~p~ 97 (223)
..|++++..+ ...+-||.|+-+++ .++. |..-.+.|+++|.+++++.-
T Consensus 31 R~I~V~F~a~--~~~~lpW~F~P~q~~v~V~pGE~~~~~y~a~N~sd~~i~G 80 (164)
T 1so9_A 31 EKIKVTFDAN--VAAGLPWEFVPVQRDIDVRIGETVQIMYRAKNLASTPTTG 80 (164)
T ss_dssp CCEEEEEEEE--ECTTSCEEEECSCSEEEECTTCCCCEEEEEEECSSSCEEC
T ss_pred eEEEEEEEee--cCCCCceEEEeceeEEEEcCCCeEEEEEEEECCCCCcEEE
Confidence 3466666443 22467999986554 4444 67778899999999998753
No 38
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=36.86 E-value=6.7 Score=24.30 Aligned_cols=15 Identities=13% Similarity=0.136 Sum_probs=12.6
Q ss_pred cccccccEEcCCCCC
Q 027452 8 WDSGGVPHCFPQFGP 22 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~ 22 (223)
+||.|||++.|-=.+
T Consensus 39 PI~dGIPvmL~~Ear 53 (67)
T 2jny_A 39 RIDDGIPVLLIDEAT 53 (67)
T ss_dssp EEETTEECCCSSCCE
T ss_pred cCCCCEeeeChhHhc
Confidence 799999999997544
No 39
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=36.66 E-value=30 Score=25.14 Aligned_cols=26 Identities=19% Similarity=0.293 Sum_probs=21.4
Q ss_pred cEEEEEEEEeCCCCcEEEeeeccceEEEe
Q 027452 80 SISTELTITNTDNKPFSFSSALHTYFRAS 108 (223)
Q Consensus 80 ~L~i~~~v~N~~~~~~p~~~g~HpyF~~~ 108 (223)
-|.+.++|+|.|++++.++. ..|.+-
T Consensus 48 fviV~VTIeN~g~e~~~~s~---~~F~L~ 73 (159)
T 3cfu_A 48 RLIIEVTMENIGEDSISYNF---IGFDLR 73 (159)
T ss_dssp EEEEEEEEEECSSSCEEEEG---GGEEEE
T ss_pred EEEEEEEEEECCCCceeeCc---ccEEEE
Confidence 48999999999999998875 367764
No 40
>2ab9_A Pro-SFTI-1; protein, beta-sheet, random coil, hydrolase inhibitor; NMR {Helianthus annuus}
Probab=35.30 E-value=6.8 Score=19.38 Aligned_cols=7 Identities=57% Similarity=1.455 Sum_probs=5.1
Q ss_pred ccEEcCC
Q 027452 13 VPHCFPQ 19 (223)
Q Consensus 13 ~PvlfP~ 19 (223)
-|||||-
T Consensus 22 ppicfpd 28 (31)
T 2ab9_A 22 PPICFPD 28 (31)
T ss_dssp SCSSSSC
T ss_pred CCcccCC
Confidence 4788983
No 41
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.50 E-value=96 Score=20.22 Aligned_cols=22 Identities=14% Similarity=0.048 Sum_probs=19.3
Q ss_pred CCcEEEEEEEEeCCCCcEEEee
Q 027452 78 TKSISTELTITNTDNKPFSFSS 99 (223)
Q Consensus 78 ~~~L~i~~~v~N~~~~~~p~~~ 99 (223)
+...+.+++++|+|+.|+.|.+
T Consensus 25 g~~~~~~~~l~N~g~~p~~~~~ 46 (112)
T 2e6j_A 25 GSAHCYEAILYNKGSIDALFNM 46 (112)
T ss_dssp SCCEEEEEEEEECCSSCEEEEE
T ss_pred CCEEEEEEEEEECCcceEEEEE
Confidence 6678889999999999998876
No 42
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=34.06 E-value=16 Score=34.09 Aligned_cols=32 Identities=13% Similarity=0.334 Sum_probs=22.4
Q ss_pred ccCCcceEEEEE---E-----EEeCCcEEEEEEEEeCC-CC
Q 027452 62 AMWDFSFQALFK---V-----ILNTKSISTELTITNTD-NK 93 (223)
Q Consensus 62 ~~~P~~f~l~~~---y-----~L~~~~L~i~~~v~N~~-~~ 93 (223)
..|||-|-|.+| | +++++.++++++|+|+| +.
T Consensus 710 plfPFG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~ 750 (845)
T 3abz_A 710 VAFPFGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKF 750 (845)
T ss_dssp CSBCTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSC
T ss_pred eeecccCCCcceeEEEecccccccCCeEEEEEEEEECCcCC
Confidence 469987754332 2 23367799999999999 65
No 43
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=33.50 E-value=8 Score=23.99 Aligned_cols=15 Identities=13% Similarity=0.080 Sum_probs=12.6
Q ss_pred cccccccEEcCCCCC
Q 027452 8 WDSGGVPHCFPQFGP 22 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~ 22 (223)
+||.|||++.|-=.+
T Consensus 37 PI~dGIPvmL~~Ear 51 (68)
T 2jr6_A 37 PIKDGIPYMLENEAR 51 (68)
T ss_dssp EEETTEECCCTTTCE
T ss_pred cCCCCeeeeChhhcc
Confidence 799999999997544
No 44
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=32.99 E-value=35 Score=24.83 Aligned_cols=33 Identities=12% Similarity=0.374 Sum_probs=25.4
Q ss_pred CCcEEEEEEEEeCCCCcEEEe-eeccceEEEeec
Q 027452 78 TKSISTELTITNTDNKPFSFS-SALHTYFRASVT 110 (223)
Q Consensus 78 ~~~L~i~~~v~N~~~~~~p~~-~g~HpyF~~~~~ 110 (223)
.+.+++.++|+|+|..+...+ +.++=||...+.
T Consensus 23 ~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~ 56 (160)
T 2xbt_A 23 SNQIYMNMKLQNTGSSTYDLSKITIRYFYTSDDD 56 (160)
T ss_dssp ESSEEEEEEEEECSSCCEEGGGEEEEEEECCSSC
T ss_pred CCEEEEEEEEEECCCCceecCcEEEEEEEeCCCC
Confidence 467889999999998876654 788888887653
No 45
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=32.88 E-value=7.9 Score=24.02 Aligned_cols=15 Identities=13% Similarity=0.089 Sum_probs=12.3
Q ss_pred cccccccEEcCCCCC
Q 027452 8 WDSGGVPHCFPQFGP 22 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~ 22 (223)
+||.|||++.|-=.+
T Consensus 37 PI~dGIPvmL~~Ear 51 (68)
T 2hf1_A 37 PIKDGIPMMLESEAR 51 (68)
T ss_dssp EEETTEECCCGGGCE
T ss_pred cCCCCeeeeChhhcc
Confidence 799999999987443
No 46
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=32.55 E-value=8.5 Score=22.85 Aligned_cols=14 Identities=14% Similarity=0.085 Sum_probs=11.6
Q ss_pred cccccccEEcCCCC
Q 027452 8 WDSGGVPHCFPQFG 21 (223)
Q Consensus 8 ~~rgG~PvlfP~~g 21 (223)
+||.|+|++.|--.
T Consensus 39 PI~dGIPvlL~~ea 52 (56)
T 2kpi_A 39 PVRDGIPVLLVDEA 52 (56)
T ss_dssp EEETTEECCCTTTC
T ss_pred eeECCEeeeCHHHc
Confidence 79999999988643
No 47
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=31.60 E-value=46 Score=24.43 Aligned_cols=32 Identities=22% Similarity=0.432 Sum_probs=25.8
Q ss_pred CCcEEEEEEEEeCCCCcEEEe-eeccceEEEee
Q 027452 78 TKSISTELTITNTDNKPFSFS-SALHTYFRASV 109 (223)
Q Consensus 78 ~~~L~i~~~v~N~~~~~~p~~-~g~HpyF~~~~ 109 (223)
.+.+++.++|+|+|..+...+ +.+.=||.+.+
T Consensus 26 ~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~ 58 (170)
T 2wnx_A 26 KNTIRATINIKNTGTTPVNLSDIKVRYWFTSDG 58 (170)
T ss_dssp CCEEEEEEEEEECSSSCEEGGGEEEEEEECCTT
T ss_pred CCEEEEEEEEEECCCCceecCcEEEEEEEcCCC
Confidence 467999999999998877654 78888888764
No 48
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=31.18 E-value=8.8 Score=23.96 Aligned_cols=15 Identities=20% Similarity=0.080 Sum_probs=12.4
Q ss_pred cccccccEEcCCCCC
Q 027452 8 WDSGGVPHCFPQFGP 22 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~ 22 (223)
+||.|||++.|-=.+
T Consensus 37 PI~dGIPvmL~~Ear 51 (70)
T 2js4_A 37 PVRDGVPIMLEAEAR 51 (70)
T ss_dssp EEETTEECCCGGGSE
T ss_pred cCCCCeeeeChhhcc
Confidence 799999999987543
No 49
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=30.89 E-value=50 Score=27.24 Aligned_cols=23 Identities=30% Similarity=0.534 Sum_probs=19.0
Q ss_pred CcEEEEEEEEeCCCCcEEEeeecc
Q 027452 79 KSISTELTITNTDNKPFSFSSALH 102 (223)
Q Consensus 79 ~~L~i~~~v~N~~~~~~p~~~g~H 102 (223)
+.+.|..+|+|+|++++-+ +-||
T Consensus 36 ~~~~vk~tvtN~g~~~~~l-Lk~~ 58 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRL-LKWQ 58 (343)
T ss_dssp SCCEEEEEEEECSSSCEEE-EGGG
T ss_pred CCeEEEEEEEeCCCCceEe-eccC
Confidence 4589999999999999766 4555
No 50
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=29.90 E-value=1.4e+02 Score=20.78 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=21.2
Q ss_pred CceEEeccCceeceEECCCCeEEEEEEEEe
Q 027452 193 KDFVCVENAKIGKVQLEPEQSWTAKQHLSI 222 (223)
Q Consensus 193 ~~~vCiEP~~~~~~~L~pGe~~~~~~~i~v 222 (223)
...+.|+|.. -+|.||++....+++.+
T Consensus 74 ~~wl~v~P~~---G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 74 KPWLRAEPFE---GYLEPNETVDISLDVYV 100 (140)
T ss_dssp CTTEEEESCE---EEECTTCEEEEEEEECB
T ss_pred hHhhhcCCcc---cccCCCCeeEEEEEEEE
Confidence 3578888854 79999999988887754
No 51
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=29.38 E-value=9.9 Score=23.65 Aligned_cols=15 Identities=13% Similarity=0.067 Sum_probs=12.3
Q ss_pred cccccccEEcCCCCC
Q 027452 8 WDSGGVPHCFPQFGP 22 (223)
Q Consensus 8 ~~rgG~PvlfP~~g~ 22 (223)
+||.|||++.|-=.+
T Consensus 37 PI~dGIPvmL~~ear 51 (69)
T 2pk7_A 37 PIRDGIPVMLESEAR 51 (69)
T ss_dssp EEETTEECCCGGGCE
T ss_pred cCcCCeeeeChhhcc
Confidence 799999999987444
No 52
>2g30_A AP-2 complex subunit beta-1; alpha-helical ARH peptide, platform domain, sandwich domain, endocytosis, adaptor, endocytosis/exocytosis complex; 1.60A {Homo sapiens} SCOP: b.1.10.1 d.105.1.1 PDB: 1e42_A 3h1z_A 3hs9_A 2iv9_A 2iv8_A
Probab=28.09 E-value=88 Score=24.60 Aligned_cols=29 Identities=14% Similarity=0.085 Sum_probs=23.8
Q ss_pred ceEEEEEEEEeCCcEEEEEEEEeCCCCcE
Q 027452 67 SFQALFKVILNTKSISTELTITNTDNKPF 95 (223)
Q Consensus 67 ~f~l~~~y~L~~~~L~i~~~v~N~~~~~~ 95 (223)
-+++..+|+-.++.+.+.++++|.+..+|
T Consensus 43 GLeI~g~f~r~~g~i~l~l~~~N~s~~~i 71 (258)
T 2g30_A 43 GLEISGTFTHRQGHIYMEMNFTNKALQHM 71 (258)
T ss_dssp TEEEEEEEEEETTEEEEEEEEEECSSSCB
T ss_pred cEEEEEEEEEeCCEEEEEEEEecCCccce
Confidence 56677777777899999999999998864
No 53
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=28.00 E-value=13 Score=24.84 Aligned_cols=14 Identities=14% Similarity=0.249 Sum_probs=11.7
Q ss_pred cccccccEEcCCCC
Q 027452 8 WDSGGVPHCFPQFG 21 (223)
Q Consensus 8 ~~rgG~PvlfP~~g 21 (223)
+||.|||++.|-=.
T Consensus 64 PI~dGIPvmL~~ea 77 (97)
T 2k5r_A 64 RIEDSIPVLLPEEA 77 (97)
T ss_dssp EEETTEEECCGGGE
T ss_pred cccCCCcccChHHh
Confidence 79999999998643
No 54
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=26.73 E-value=65 Score=23.04 Aligned_cols=33 Identities=30% Similarity=0.510 Sum_probs=25.5
Q ss_pred CCcEEEEEEEEeCCCCcEEEe-eeccceEEEeec
Q 027452 78 TKSISTELTITNTDNKPFSFS-SALHTYFRASVT 110 (223)
Q Consensus 78 ~~~L~i~~~v~N~~~~~~p~~-~g~HpyF~~~~~ 110 (223)
.++++..+.|+|++..+...+ +.+.=||.+.+.
T Consensus 16 ~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~ 49 (146)
T 3zqx_A 16 TQEIKGKFNIVNTGNRDYSLKDIVLRYYFTKEHN 49 (146)
T ss_dssp ESCEEEEEEEEECSSCCEEGGGEEEEEECCCCCC
T ss_pred CCEEeEEEEEEECCCceEEcCcEEEEEEEecCCC
Confidence 467899999999998877764 778888877643
No 55
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=25.43 E-value=88 Score=20.96 Aligned_cols=18 Identities=22% Similarity=0.510 Sum_probs=13.7
Q ss_pred CCcEEEEEEEEeCCCCcE
Q 027452 78 TKSISTELTITNTDNKPF 95 (223)
Q Consensus 78 ~~~L~i~~~v~N~~~~~~ 95 (223)
+.+...+++|+|.++.++
T Consensus 18 ~~Gf~~~vtVtN~g~~~i 35 (110)
T 1exg_A 18 NTGFTANVTVKNTSSAPV 35 (110)
T ss_dssp SSEEEEEEEEEECSSSCE
T ss_pred CCCEEEEEEEEeCCCCcc
Confidence 566778888888887765
No 56
>3lzq_A P19 protein; copper binding, iron transport, iron uptake, P19 delition, T protein; 1.41A {Campylobacter jejuni} PDB: 3lzn_A 3lzo_A 3lzp_A 3lzl_A 3lzr_A
Probab=22.38 E-value=1.6e+02 Score=21.36 Aligned_cols=27 Identities=19% Similarity=0.240 Sum_probs=13.6
Q ss_pred EEEEEEEEeCCCC--------cEEEeeeccceEEE
Q 027452 81 ISTELTITNTDNK--------PFSFSSALHTYFRA 107 (223)
Q Consensus 81 L~i~~~v~N~~~~--------~~p~~~g~HpyF~~ 107 (223)
|+++++++|.++. ||-.+.|.|=.=|+
T Consensus 66 L~v~y~i~~~~~~~v~~g~~mPMvA~dGpHYG~Nv 100 (159)
T 3lzq_A 66 LTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANI 100 (159)
T ss_dssp CEEEEEEEETTTCCEEEEECEEEEETTEEEEEEEE
T ss_pred ceEEEEEEeCCCCeEEEeecceeecCCCCccccce
Confidence 4555555554432 45555666655443
No 57
>1g43_A Scaffolding protein; beta-sandwich, structural protein; 2.20A {Clostridium cellulolyticum} SCOP: b.2.2.2
Probab=21.43 E-value=55 Score=23.71 Aligned_cols=32 Identities=25% Similarity=0.506 Sum_probs=25.2
Q ss_pred CCcEEEEEEEEeCCCCcEEEe-eeccceEEEee
Q 027452 78 TKSISTELTITNTDNKPFSFS-SALHTYFRASV 109 (223)
Q Consensus 78 ~~~L~i~~~v~N~~~~~~p~~-~g~HpyF~~~~ 109 (223)
.+.+++.++|+|++..+...+ +.++=||...+
T Consensus 19 ~n~i~~~~~I~N~g~~~i~Ls~l~iRYyft~d~ 51 (160)
T 1g43_A 19 SNSIYARFKVTNTSGSPINLADLKLRYYYTQDA 51 (160)
T ss_dssp ESCEEEEEEEEECSSSCEEGGGEEEEEEECCSS
T ss_pred CCEEEEEEEEEECCCCCcccCcEEEEEEEecCC
Confidence 467888999999998877754 78888888764
No 58
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=20.40 E-value=73 Score=29.08 Aligned_cols=32 Identities=13% Similarity=0.407 Sum_probs=21.4
Q ss_pred ccCCcceEEEEE---E---EE--eCCcEEEEEEEEeCCCC
Q 027452 62 AMWDFSFQALFK---V---IL--NTKSISTELTITNTDNK 93 (223)
Q Consensus 62 ~~~P~~f~l~~~---y---~L--~~~~L~i~~~v~N~~~~ 93 (223)
..|||-|-|.+| | ++ .++.++++++|+|+|+.
T Consensus 590 plypFG~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~ 629 (721)
T 2x41_A 590 PAYEFGYGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGR 629 (721)
T ss_dssp EEECTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSS
T ss_pred eeeccCCCCCcceeEeeceEeecCCCeEEEEEEEEECCCC
Confidence 468887644331 1 22 25679999999999975
Done!