BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027457
(223 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225425744|ref|XP_002276441.1| PREDICTED: probable peptidyl-prolyl cis-trans isomerase isoform 1
[Vitis vinifera]
gi|359473259|ref|XP_003631278.1| PREDICTED: probable peptidyl-prolyl cis-trans isomerase isoform 2
[Vitis vinifera]
gi|296086396|emb|CBI31985.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/215 (84%), Positives = 201/215 (93%), Gaps = 2/215 (0%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L ++G ASSQE PQLGSARVVFQTNYGDIEFGF+P VAP+TVDHIFKLVRLGC+NTN
Sbjct: 14 LALAFVVG-ASSQE-PQLGSARVVFQTNYGDIEFGFFPGVAPKTVDHIFKLVRLGCFNTN 71
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNS 128
HFFRVD+GFVAQVADVVGGRSAPMNE QR EA KTVVGEFSDVKHVRGILSMGRY+DP+S
Sbjct: 72 HFFRVDRGFVAQVADVVGGRSAPMNEEQREEAVKTVVGEFSDVKHVRGILSMGRYADPDS 131
Query: 129 AASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYY 188
A+SSFS+LLGDAPHLDGQYA+FG+VTKGDETL+KLE LPTR+EGIFVMPTERITI SSY+
Sbjct: 132 ASSSFSMLLGDAPHLDGQYAIFGRVTKGDETLKKLEQLPTRREGIFVMPTERITILSSYF 191
Query: 189 YDTEMEICEKERSVLKRRLTASVIEIERQRMKCFP 223
YDT+ME CE+E+S LKRRL ASV+EIERQRMKCFP
Sbjct: 192 YDTKMETCEQEKSTLKRRLAASVVEIERQRMKCFP 226
>gi|224110430|ref|XP_002315517.1| predicted protein [Populus trichocarpa]
gi|222864557|gb|EEF01688.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/207 (86%), Positives = 192/207 (92%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
ASS +DP L SARVVFQTNYGDIEFGF+PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG
Sbjct: 17 AASSSQDPHLSSARVVFQTNYGDIEFGFFPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
Query: 77 FVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSIL 136
FVAQVADVVGGRSAPMNE Q EA+KTVVGEFSDVKHVRGILSMGR+ DPNSA SSFS+L
Sbjct: 77 FVAQVADVVGGRSAPMNEEQIKEAKKTVVGEFSDVKHVRGILSMGRFEDPNSAQSSFSML 136
Query: 137 LGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEIC 196
LG+APHLDGQYA+FGKVTKGD+TL KLE L TRKEGIFVMPTERITI SSYYYDTEME C
Sbjct: 137 LGNAPHLDGQYAIFGKVTKGDDTLTKLEQLRTRKEGIFVMPTERITILSSYYYDTEMESC 196
Query: 197 EKERSVLKRRLTASVIEIERQRMKCFP 223
E+ERSVLKRRL+AS +EIE+QRMKCFP
Sbjct: 197 EEERSVLKRRLSASAVEIEKQRMKCFP 223
>gi|255558158|ref|XP_002520106.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
gi|223540598|gb|EEF42161.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
Length = 222
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/202 (86%), Positives = 190/202 (94%)
Query: 22 EDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQV 81
EDP+LGSARVVFQTNYGDIEFGFYP+VAPQTV+HI+KLVRLGCYNTNHFFRVDKGFVAQV
Sbjct: 21 EDPELGSARVVFQTNYGDIEFGFYPNVAPQTVEHIYKLVRLGCYNTNHFFRVDKGFVAQV 80
Query: 82 ADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
ADVVGGRSAPMNE QR EA+KTV+GEFS VKHVRGILSMGRYSDPNSA+SSFSILLGDAP
Sbjct: 81 ADVVGGRSAPMNEEQRKEAQKTVIGEFSHVKHVRGILSMGRYSDPNSASSSFSILLGDAP 140
Query: 142 HLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERS 201
HLDGQYA+FGKVTKGD+TL KLE +PT +EGIFVMPTERITI SSYYYD +E CE+ERS
Sbjct: 141 HLDGQYAIFGKVTKGDDTLSKLEQVPTHREGIFVMPTERITILSSYYYDAVIETCEEERS 200
Query: 202 VLKRRLTASVIEIERQRMKCFP 223
+L+RRL AS IEIERQRMKCFP
Sbjct: 201 ILRRRLAASAIEIERQRMKCFP 222
>gi|449442287|ref|XP_004138913.1| PREDICTED: probable peptidyl-prolyl cis-trans isomerase-like
[Cucumis sativus]
Length = 226
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/207 (84%), Positives = 189/207 (91%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
T +S +D LGSARVVFQTNYGDIEFGF+P VAP+TVDHIFKLVRLGCYNTNHFFRVDKG
Sbjct: 20 TITSAQDSHLGSARVVFQTNYGDIEFGFFPKVAPRTVDHIFKLVRLGCYNTNHFFRVDKG 79
Query: 77 FVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSIL 136
FVAQVADVVGGR APMNE QR EAEKTVVGEFSDVKHVRGILSMGRY DP+SA SSFS+L
Sbjct: 80 FVAQVADVVGGRLAPMNEEQRTEAEKTVVGEFSDVKHVRGILSMGRYDDPDSAQSSFSML 139
Query: 137 LGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEIC 196
LGDAPHLDG YA+FGKVTKGD+TL+KLE LPTR+EGIFVMPTERITI SSYYYDT ++ C
Sbjct: 140 LGDAPHLDGTYAIFGKVTKGDDTLKKLEELPTRREGIFVMPTERITILSSYYYDTNLDSC 199
Query: 197 EKERSVLKRRLTASVIEIERQRMKCFP 223
E++RS LKRRL AS +EIERQRMKCFP
Sbjct: 200 EEDRSTLKRRLAASFVEIERQRMKCFP 226
>gi|363814306|ref|NP_001242025.1| uncharacterized protein LOC100819238 precursor [Glycine max]
gi|255640687|gb|ACU20628.1| unknown [Glycine max]
Length = 230
Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 174/215 (80%), Positives = 191/215 (88%), Gaps = 1/215 (0%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
+L+ LI S+ E P+LGS RVVFQT YGDIEFGFYP+VAP+TVDHI+KLVRLG YNTN
Sbjct: 13 FSLLALISVISALE-PELGSTRVVFQTKYGDIEFGFYPTVAPKTVDHIYKLVRLGGYNTN 71
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNS 128
HFFRVDKGFVAQVADV GRSAPMNE QR EA KTVVGEF++VKHVRGILSMGRY DP+S
Sbjct: 72 HFFRVDKGFVAQVADVTNGRSAPMNEEQRREAVKTVVGEFTEVKHVRGILSMGRYDDPDS 131
Query: 129 AASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYY 188
A+SSFSILLGDAPHLDG+YA+FGKVTKGDETL KLE LPTRKEGIFVMP ERITI SSYY
Sbjct: 132 ASSSFSILLGDAPHLDGKYAIFGKVTKGDETLTKLEQLPTRKEGIFVMPMERITILSSYY 191
Query: 189 YDTEMEICEKERSVLKRRLTASVIEIERQRMKCFP 223
YDTE E CE++RS+LKRRL AS IE+ERQRMKCFP
Sbjct: 192 YDTETENCEEDRSILKRRLAASAIEVERQRMKCFP 226
>gi|357486745|ref|XP_003613660.1| Peptidyl-prolyl cis-trans isomerase-like protein [Medicago
truncatula]
gi|217075436|gb|ACJ86078.1| unknown [Medicago truncatula]
gi|355514995|gb|AES96618.1| Peptidyl-prolyl cis-trans isomerase-like protein [Medicago
truncatula]
gi|388515327|gb|AFK45725.1| unknown [Medicago truncatula]
Length = 220
Score = 362 bits (929), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 173/216 (80%), Positives = 191/216 (88%), Gaps = 1/216 (0%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
F+ L+ + SS E PQ+GS RVVFQTNYGDIEFGFYP+VAP+TVDHIFKLVRLG YNT
Sbjct: 6 FILLLAFASSISSFE-PQMGSTRVVFQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNT 64
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPN 127
NHFFRVDKGFVAQVADV GRSAPMNE QR AEKTVVGEFSDVKHVRGILSMGR+ DP+
Sbjct: 65 NHFFRVDKGFVAQVADVANGRSAPMNEEQRRVAEKTVVGEFSDVKHVRGILSMGRHDDPD 124
Query: 128 SAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSY 187
S SSFS+LLG++PHLDG+YA+FGKVTKGD+TL KLE LPTR+EGIFVMPTERITI SSY
Sbjct: 125 SGGSSFSMLLGNSPHLDGKYAIFGKVTKGDDTLTKLEQLPTRREGIFVMPTERITILSSY 184
Query: 188 YYDTEMEICEKERSVLKRRLTASVIEIERQRMKCFP 223
YYDTE E CE++RSVLKRRL AS IE+ERQRMKCFP
Sbjct: 185 YYDTEAETCEQDRSVLKRRLAASAIEVERQRMKCFP 220
>gi|297850978|ref|XP_002893370.1| peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297339212|gb|EFH69629.1| peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 226
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/215 (79%), Positives = 191/215 (88%), Gaps = 2/215 (0%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L ++++ S +P+LGSARVVFQT+YGDIEFGFYP+VAP+TVDHIFKLVRLG YNTN
Sbjct: 14 LAFVSIVKALS--HEPELGSARVVFQTSYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTN 71
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNS 128
HFFRVDKGFVAQVADV GRSAPMNE QR EAEK +VGEFSDVKHVRG LSMGRY DPNS
Sbjct: 72 HFFRVDKGFVAQVADVASGRSAPMNEEQRKEAEKKIVGEFSDVKHVRGTLSMGRYDDPNS 131
Query: 129 AASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYY 188
A SSFS+LLG+APHLD QYAVFGKVTKGDETL KLE +PTR+EGIFVMPTERITI S+YY
Sbjct: 132 AQSSFSMLLGNAPHLDRQYAVFGKVTKGDETLSKLEEVPTRREGIFVMPTERITILSTYY 191
Query: 189 YDTEMEICEKERSVLKRRLTASVIEIERQRMKCFP 223
YDT+ME CE+ERSVL+RRL AS +E+ERQRMKCFP
Sbjct: 192 YDTKMESCEEERSVLRRRLQASFVEVERQRMKCFP 226
>gi|18396122|ref|NP_564267.1| Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
[Arabidopsis thaliana]
gi|21553981|gb|AAM63062.1| unknown [Arabidopsis thaliana]
gi|26451588|dbj|BAC42891.1| unknown protein [Arabidopsis thaliana]
gi|28973273|gb|AAO63961.1| unknown protein [Arabidopsis thaliana]
gi|332192641|gb|AEE30762.1| Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
[Arabidopsis thaliana]
Length = 226
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 170/201 (84%), Positives = 185/201 (92%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
+P+LGSARVVFQT+YGDIEFGFYP+VAP+TVDHIFKLVRLG YNTNHFFRVDKGFVAQVA
Sbjct: 26 EPELGSARVVFQTSYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVA 85
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
DV GRSAPMNE QR EAEK +VGEFSDVKHVRG LSMGRY DPNSA SSFS+LLG+APH
Sbjct: 86 DVASGRSAPMNEEQRKEAEKKIVGEFSDVKHVRGTLSMGRYDDPNSAQSSFSMLLGNAPH 145
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSV 202
LD QYAVFGKVTKGDETL KLE +PTR+EGIFVMPTERITI S+YYYDT+ME CE+ERSV
Sbjct: 146 LDRQYAVFGKVTKGDETLSKLEEVPTRREGIFVMPTERITILSTYYYDTKMESCEEERSV 205
Query: 203 LKRRLTASVIEIERQRMKCFP 223
LKRRL AS +E+ERQRMKCFP
Sbjct: 206 LKRRLQASFVEVERQRMKCFP 226
>gi|56407691|gb|AAV88079.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[Ipomoea batatas]
Length = 248
Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 166/184 (90%), Positives = 176/184 (95%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
QTNYGDIEFGFYP VAP+TV+HIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGR+ PMN
Sbjct: 2 QTNYGDIEFGFYPRVAPRTVEHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRTVPMN 61
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
E QRVEAEKTV GEFSDVKHVRGILSMGRYSDP+SA+SSFS+LLGDAPHLDGQYAVFGKV
Sbjct: 62 EEQRVEAEKTVKGEFSDVKHVRGILSMGRYSDPDSASSSFSMLLGDAPHLDGQYAVFGKV 121
Query: 154 TKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSVLKRRLTASVIE 213
TKGDETLRKLE LPTR+EGIFVMPTERITI SSYYYDTEME CE+ERS+LKRRL ASV+E
Sbjct: 122 TKGDETLRKLEQLPTRREGIFVMPTERITILSSYYYDTEMESCEQERSLLKRRLAASVVE 181
Query: 214 IERQ 217
IERQ
Sbjct: 182 IERQ 185
>gi|357156222|ref|XP_003577382.1| PREDICTED: probable peptidyl-prolyl cis-trans isomerase-like
[Brachypodium distachyon]
Length = 231
Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 160/200 (80%), Positives = 181/200 (90%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
DP LGSARVVFQTN+GDIEFGF+P VAP+TV+HIFKLVRLGCYNTNHFFRVDKGFVAQVA
Sbjct: 31 DPNLGSARVVFQTNHGDIEFGFFPRVAPKTVEHIFKLVRLGCYNTNHFFRVDKGFVAQVA 90
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
DVVGGR APMN+ Q +AEK++VGEFS VKH+RGILSMGRYSDP+SA+SSFSILLGDAPH
Sbjct: 91 DVVGGRKAPMNKEQEQQAEKSIVGEFSTVKHIRGILSMGRYSDPDSASSSFSILLGDAPH 150
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSV 202
LDGQYAVFG+VTKGD+TLRKLE LPTRKEGIFVMP ERI I S+YYYD E++ CE E+S+
Sbjct: 151 LDGQYAVFGRVTKGDDTLRKLERLPTRKEGIFVMPIERIEIMSTYYYDIEVDSCEAEKSI 210
Query: 203 LKRRLTASVIEIERQRMKCF 222
L++RL+ S EIER R KCF
Sbjct: 211 LRKRLSESSSEIERWRRKCF 230
>gi|115486183|ref|NP_001068235.1| Os11g0602900 [Oryza sativa Japonica Group]
gi|77551808|gb|ABA94605.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type family
protein, expressed [Oryza sativa Japonica Group]
gi|77551809|gb|ABA94606.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type family
protein, expressed [Oryza sativa Japonica Group]
gi|77551810|gb|ABA94607.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type family
protein, expressed [Oryza sativa Japonica Group]
gi|113645457|dbj|BAF28598.1| Os11g0602900 [Oryza sativa Japonica Group]
gi|215679387|dbj|BAG96527.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765508|dbj|BAG87205.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 235
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 157/200 (78%), Positives = 180/200 (90%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
DP LGSARVVFQT +GDIEFGF+P VAP+TV+HI+KLVRLGCYNTNHFFRVDKGFVAQVA
Sbjct: 35 DPNLGSARVVFQTTHGDIEFGFFPHVAPKTVEHIYKLVRLGCYNTNHFFRVDKGFVAQVA 94
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
VVGGR+APMN+ Q+ EAEK+VVGEFS VKHVRGILSMGR+SDPNS SSFSILLGDAPH
Sbjct: 95 SVVGGRTAPMNDEQQEEAEKSVVGEFSTVKHVRGILSMGRHSDPNSGGSSFSILLGDAPH 154
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSV 202
LDGQYAVFG++TKGD+TLRKLE LPTR+EGIFVMP ERI+I S+YYYD ++E CE E+S+
Sbjct: 155 LDGQYAVFGRLTKGDDTLRKLEQLPTRREGIFVMPIERISILSTYYYDVDLESCEAEKSI 214
Query: 203 LKRRLTASVIEIERQRMKCF 222
L+RRL+ S E+ER R KCF
Sbjct: 215 LRRRLSESASEVERWRRKCF 234
>gi|357156220|ref|XP_003577381.1| PREDICTED: probable peptidyl-prolyl cis-trans isomerase-like
[Brachypodium distachyon]
Length = 231
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/200 (79%), Positives = 177/200 (88%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
DP LGSARVVFQTN+GDIEFGF+P VAP+T +HIFKLVRLGCYNTNHFFRVDKGFVAQVA
Sbjct: 31 DPNLGSARVVFQTNHGDIEFGFFPHVAPKTAEHIFKLVRLGCYNTNHFFRVDKGFVAQVA 90
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
VVGGR APMNE Q +AEK++VGEFS VKHVRGILSMGR+SDP+S +SSFSILLGDAPH
Sbjct: 91 AVVGGRKAPMNEEQEQQAEKSIVGEFSTVKHVRGILSMGRHSDPDSGSSSFSILLGDAPH 150
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSV 202
LDGQYAVFG+VTKGD TLRKLE LPTR+EGIFVMP ERI I S+YYYD E++ CE E+S+
Sbjct: 151 LDGQYAVFGRVTKGDNTLRKLERLPTRREGIFVMPIERIDILSTYYYDIEVDSCEAEKSI 210
Query: 203 LKRRLTASVIEIERQRMKCF 222
L+RRL+ S EIER R KCF
Sbjct: 211 LRRRLSESASEIERWRRKCF 230
>gi|356498224|ref|XP_003517953.1| PREDICTED: LOW QUALITY PROTEIN: probable peptidyl-prolyl cis-trans
isomerase-like [Glycine max]
Length = 226
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/213 (77%), Positives = 181/213 (84%), Gaps = 1/213 (0%)
Query: 11 LITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHF 70
L+ L+ S E P+LG RVVFQT YGDIEFGFYP+VA +TVDHIFKLVRLG YNTNHF
Sbjct: 15 LLALVSIISGLE-PELGFTRVVFQTKYGDIEFGFYPTVASKTVDHIFKLVRLGGYNTNHF 73
Query: 71 FRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAA 130
FRVDKGFVAQVADV RS P+NE QR EA KTVVGEFS+VKHVRGILSMGRY DP+SA+
Sbjct: 74 FRVDKGFVAQVADVANERSTPVNEEQRREAVKTVVGEFSEVKHVRGILSMGRYDDPDSAS 133
Query: 131 SSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYD 190
SSFSILLGDAPHLDG+YA+FGKVTKGDE L KLE LPTRKEGIFVMP E ITI SSYYYD
Sbjct: 134 SSFSILLGDAPHLDGKYAIFGKVTKGDEMLTKLEXLPTRKEGIFVMPMECITILSSYYYD 193
Query: 191 TEMEICEKERSVLKRRLTASVIEIERQRMKCFP 223
TE E CE++RS+LK R AS +E+ERQRMKCFP
Sbjct: 194 TETENCEQDRSILKLRPAASAVEVERQRMKCFP 226
>gi|242069069|ref|XP_002449811.1| hypothetical protein SORBIDRAFT_05g023760 [Sorghum bicolor]
gi|241935654|gb|EES08799.1| hypothetical protein SORBIDRAFT_05g023760 [Sorghum bicolor]
Length = 233
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/200 (78%), Positives = 179/200 (89%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
DP LGSARVVFQTNYGDIEFGF+P VAP+TV+HIFKLVRLGCYNTNHFFRVDKGFVAQVA
Sbjct: 33 DPNLGSARVVFQTNYGDIEFGFFPHVAPKTVEHIFKLVRLGCYNTNHFFRVDKGFVAQVA 92
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
DV+ GR+APMN Q+ EAEKT+VGEFS VKHVRGILSMGR+SDP+SA SSFSILLG++PH
Sbjct: 93 DVMSGRTAPMNAEQKREAEKTIVGEFSSVKHVRGILSMGRHSDPDSAGSSFSILLGNSPH 152
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSV 202
LDGQYAVFG+VTKGD+TL KLE LPTR+EGIFVMP ERI I S+YYYD ++E CE E+++
Sbjct: 153 LDGQYAVFGRVTKGDDTLSKLERLPTRREGIFVMPIERIDILSTYYYDIDVESCEAEKTI 212
Query: 203 LKRRLTASVIEIERQRMKCF 222
L+RRL+ S E+ER R KCF
Sbjct: 213 LRRRLSESASEVERWRRKCF 232
>gi|226503169|ref|NP_001150697.1| peptidyl-prolyl cis-trans isomerase A precursor [Zea mays]
gi|195641126|gb|ACG40031.1| peptidyl-prolyl cis-trans isomerase A precursor [Zea mays]
Length = 229
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/200 (78%), Positives = 178/200 (89%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
DP LGSARVVFQTN+GDIEFGF+P VAP+TV+HIFKLVRL CYNTNHFFRVDKGFVAQVA
Sbjct: 29 DPNLGSARVVFQTNFGDIEFGFFPHVAPKTVEHIFKLVRLXCYNTNHFFRVDKGFVAQVA 88
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
DV+ GR+APMNE Q+ EAEKT+VGEFS VKHVRGILSMGR+SDP+SA SSFSILLG++PH
Sbjct: 89 DVMSGRTAPMNEEQKKEAEKTIVGEFSSVKHVRGILSMGRHSDPDSAGSSFSILLGNSPH 148
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSV 202
LDGQYAVFG+VTKGD+TL KLE LPTR+EGIFVMP ERI I S+YYYD ++E CE E+S+
Sbjct: 149 LDGQYAVFGRVTKGDDTLSKLERLPTRREGIFVMPIERINILSTYYYDIDLESCEAEKSI 208
Query: 203 LKRRLTASVIEIERQRMKCF 222
L+RRL S E+ER R KCF
Sbjct: 209 LRRRLXESASEVERWRRKCF 228
>gi|414591698|tpg|DAA42269.1| TPA: peptidyl-prolyl cis-trans isomerase A isoform 1 [Zea mays]
gi|414591699|tpg|DAA42270.1| TPA: peptidyl-prolyl cis-trans isomerase A isoform 2 [Zea mays]
Length = 229
Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 156/200 (78%), Positives = 179/200 (89%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
DP LGSARVVFQTN+GDIEFGF+P VAP+TV+HIFKLVRLGCY TNHFFRVDKGFVAQVA
Sbjct: 29 DPNLGSARVVFQTNFGDIEFGFFPHVAPKTVEHIFKLVRLGCYITNHFFRVDKGFVAQVA 88
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
DV+ GR+APMNE Q+ EAEKT+VGEFS VKHVRGILSMGR+SDP+SA SSFSILLG++PH
Sbjct: 89 DVMSGRTAPMNEEQKKEAEKTIVGEFSSVKHVRGILSMGRHSDPDSAGSSFSILLGNSPH 148
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSV 202
LDGQYAVFG+VTKGD+TL KLE LPTR+EGIFVMP ERI I S+YYYD ++E CE E+S+
Sbjct: 149 LDGQYAVFGRVTKGDDTLTKLERLPTRREGIFVMPIERINILSTYYYDIDLESCEAEKSI 208
Query: 203 LKRRLTASVIEIERQRMKCF 222
L+RRL+ S E+ER R KCF
Sbjct: 209 LRRRLSESASEVERWRRKCF 228
>gi|4262183|gb|AAD14500.1| Hypothetical protein [Arabidopsis thaliana]
Length = 204
Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 156/193 (80%), Positives = 170/193 (88%), Gaps = 6/193 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V QT+YGDIEFGFYP+VAP+TVDHIFKLVRLG YNTNHFFRVDKGFVAQVADV GRSA
Sbjct: 1 MVVQTSYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVASGRSA 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD------ 144
PMNE QR EAEK +VGEFSDVKHVRG LSMGRY DPNSA SSFS+LLG+APHLD
Sbjct: 61 PMNEEQRKEAEKKIVGEFSDVKHVRGTLSMGRYDDPNSAQSSFSMLLGNAPHLDRQIGGI 120
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSVLK 204
QYAVFGKVTKGDETL KLE +PTR+EGIFVMPTERITI S+YYYDT+ME CE+ERSVLK
Sbjct: 121 QQYAVFGKVTKGDETLSKLEEVPTRREGIFVMPTERITILSTYYYDTKMESCEEERSVLK 180
Query: 205 RRLTASVIEIERQ 217
RRL AS +E+ERQ
Sbjct: 181 RRLQASFVEVERQ 193
>gi|218186014|gb|EEC68441.1| hypothetical protein OsI_36647 [Oryza sativa Indica Group]
Length = 269
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/234 (67%), Positives = 180/234 (76%), Gaps = 34/234 (14%)
Query: 23 DPQLGSARVVFQ----------------------------------TNYGDIEFGFYPSV 48
DP LGSARVVFQ T +GDIEFGF+P V
Sbjct: 35 DPNLGSARVVFQGGKERFLLGFMEKTGPKVGFWHGQIRRLIKDFGITTHGDIEFGFFPHV 94
Query: 49 APQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEF 108
AP+TV+HI+KLVRLGCYNTNHFFRVDKGFVAQVA VVGGR+APMN+ Q+ EAEK+VVGEF
Sbjct: 95 APKTVEHIYKLVRLGCYNTNHFFRVDKGFVAQVASVVGGRTAPMNDEQQEEAEKSVVGEF 154
Query: 109 SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPT 168
S VKHVRGILSMGR+SDPNS SSFSILLGDAPHLDGQYAVFG++TKGD+TLRKLE LPT
Sbjct: 155 STVKHVRGILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLEQLPT 214
Query: 169 RKEGIFVMPTERITIHSSYYYDTEMEICEKERSVLKRRLTASVIEIERQRMKCF 222
R+EGIFVMP ERI+I S+YYYD ++E CE E+S+L+RRL+ S E+ER R KCF
Sbjct: 215 RREGIFVMPIERISILSTYYYDVDLESCEAEKSILRRRLSESASEVERWRRKCF 268
>gi|168024667|ref|XP_001764857.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683893|gb|EDQ70299.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 183
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 142/185 (76%), Positives = 158/185 (85%), Gaps = 2/185 (1%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
+P+LG+ RVVFQT YGDIEFGFYP VAP+TV HI KLVRLG YNTNHFFRVDKGFVAQVA
Sbjct: 1 EPKLGNTRVVFQTTYGDIEFGFYPDVAPKTVAHIMKLVRLGAYNTNHFFRVDKGFVAQVA 60
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
DV+GGR APMN QR E +KT+ GEFS VKHVRGILSMGRYSDP+SA SSFS+LLG+APH
Sbjct: 61 DVIGGREAPMNAEQRQEGKKTIPGEFSQVKHVRGILSMGRYSDPDSAGSSFSMLLGNAPH 120
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSV 202
LDGQYA+FGKVTKGDE L KLE LPTR+EGIFVMP +RITI S+YYY E+E CE
Sbjct: 121 LDGQYAIFGKVTKGDEVLAKLEELPTRREGIFVMPLQRITILSTYYY--EIESCEDRVYS 178
Query: 203 LKRRL 207
LK+RL
Sbjct: 179 LKKRL 183
>gi|302780008|ref|XP_002971779.1| hypothetical protein SELMODRAFT_95954 [Selaginella moellendorffii]
gi|300160911|gb|EFJ27528.1| hypothetical protein SELMODRAFT_95954 [Selaginella moellendorffii]
Length = 234
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 140/198 (70%), Positives = 154/198 (77%), Gaps = 14/198 (7%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
QT YGDIEFGFYP VAP TV+HIFKLVRLG YNTNHFFRVDKGFVAQVADVVGGR AP+N
Sbjct: 1 QTKYGDIEFGFYPDVAPVTVEHIFKLVRLGAYNTNHFFRVDKGFVAQVADVVGGRKAPLN 60
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG-------- 145
E Q E +KT+ GEFSDVKHVRGILSMGRYSDPNSA SSFSILLG APHLD
Sbjct: 61 EAQMEEGKKTIKGEFSDVKHVRGILSMGRYSDPNSAQSSFSILLGSAPHLDREVDLSLFS 120
Query: 146 ----QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEME--ICEKE 199
QYAVFGKVTKG ETL L+ LPT++EGIFVMP ER+TI S+YYYD + CE E
Sbjct: 121 FFVLQYAVFGKVTKGFETLELLQELPTKREGIFVMPQERVTILSTYYYDVDPVPLKCEDE 180
Query: 200 RSVLKRRLTASVIEIERQ 217
S+L+RRL + E+E Q
Sbjct: 181 VSILRRRLIQASNELEEQ 198
>gi|302760009|ref|XP_002963427.1| hypothetical protein SELMODRAFT_79654 [Selaginella moellendorffii]
gi|300168695|gb|EFJ35298.1| hypothetical protein SELMODRAFT_79654 [Selaginella moellendorffii]
Length = 232
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/196 (70%), Positives = 154/196 (78%), Gaps = 12/196 (6%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
QT YGDIEFGFYP VAP TV+HIFKLVRLG YNTNHFFRVDKGFVAQVADVVGGR AP+N
Sbjct: 1 QTKYGDIEFGFYPDVAPITVEHIFKLVRLGAYNTNHFFRVDKGFVAQVADVVGGRKAPLN 60
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ------- 146
E Q E +KT+ GEFSDVKHVRGILSMGRYSDPNSA SSFSILLG APHLD +
Sbjct: 61 EAQMEEGKKTIKGEFSDVKHVRGILSMGRYSDPNSAQSSFSILLGSAPHLDREVSLILFS 120
Query: 147 ---YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEME--ICEKERS 201
YAVFGKVTKG ETL L+ LPT++EGIFVMP ER+TI S+YYYD + CE E S
Sbjct: 121 FYAYAVFGKVTKGFETLELLQELPTKREGIFVMPQERVTILSTYYYDVDPVPLKCEDEVS 180
Query: 202 VLKRRLTASVIEIERQ 217
+L+RRL + E+E Q
Sbjct: 181 ILRRRLIQASNELEEQ 196
>gi|302844528|ref|XP_002953804.1| hypothetical protein VOLCADRAFT_64009 [Volvox carteri f.
nagariensis]
gi|300260912|gb|EFJ45128.1| hypothetical protein VOLCADRAFT_64009 [Volvox carteri f.
nagariensis]
Length = 224
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 164/225 (72%), Gaps = 7/225 (3%)
Query: 2 LNVIRIFLTLITLIGTASSQED--PQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+ ++ +F++L+ + G ++ ++ P + RVVFQT YGDI FGF+P VAP T HIFKL
Sbjct: 3 IPLLTLFVSLLAIAGRVAANDEITPVMSDERVVFQTEYGDITFGFWPEVAPVTCAHIFKL 62
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGE-FSDVKHVRGIL 118
+R+GC+ +NHFFRVDKGFVAQ++DVVGGR+ PMN+ Q+ EA KTV E VKH G+L
Sbjct: 63 IRMGCFISNHFFRVDKGFVAQISDVVGGRTVPMNDEQQREASKTVPLEVMQGVKHHAGVL 122
Query: 119 SMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPT 178
SMGRY DPNS ASSFSILLGDAPHLD QY F KVT+G E+LR++E LPTR+EGIFVMP
Sbjct: 123 SMGRYDDPNSGASSFSILLGDAPHLDMQYTAFAKVTEGMESLRRMEELPTRREGIFVMPV 182
Query: 179 ERITIHSSYYYDTEMEICEKERSVLKRRLTASVIEIERQRMKCFP 223
+R+TI ++Y+Y CE E + L R + E++R R KC P
Sbjct: 183 KRVTILATYWYRH----CEDELAELTMRFESQADELQRVRKKCLP 223
>gi|125577657|gb|EAZ18879.1| hypothetical protein OsJ_34421 [Oryza sativa Japonica Group]
Length = 309
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/228 (57%), Positives = 159/228 (69%), Gaps = 41/228 (17%)
Query: 23 DPQLGSARVVFQ----------------------------------TNYGDIEFGFYPSV 48
DP LGSARVVFQ T +GDIEFGF+ +
Sbjct: 35 DPNLGSARVVFQGGKERFLPGFMEKTGPKVGFWHGQIRRLIKDFGITTHGDIEFGFFLML 94
Query: 49 APQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEF 108
+ ++ LV + + +VDKGFVAQVA VVGGR+APMN+ Q+ EAEK+VVGEF
Sbjct: 95 LLRQLNTFTNLV-------DDWVQVDKGFVAQVASVVGGRTAPMNDEQQEEAEKSVVGEF 147
Query: 109 SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPT 168
S VKHVRGILSMGR+SDPNS SSFSILLGDAPHLDGQYAVFG++TKGD+TLRKLE LPT
Sbjct: 148 STVKHVRGILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLEQLPT 207
Query: 169 RKEGIFVMPTERITIHSSYYYDTEMEICEKERSVLKRRLTASVIEIER 216
R+EGIFVMP ERI+I S+YYYD ++E CE E+S+L+RRL+ S E+ER
Sbjct: 208 RREGIFVMPIERISILSTYYYDVDLESCEAEKSILRRRLSESASEVER 255
>gi|159487168|ref|XP_001701607.1| cyclophilin-like protein [Chlamydomonas reinhardtii]
gi|158271548|gb|EDO97365.1| cyclophilin-like protein [Chlamydomonas reinhardtii]
Length = 235
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 146/211 (69%), Gaps = 11/211 (5%)
Query: 24 PQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVAD 83
P + RVVFQT YGDI FGF+P VAP T HIFKLVR+GCY +NHFFRVDKGFVAQ +D
Sbjct: 24 PVMSDERVVFQTEYGDITFGFWPEVAPVTCAHIFKLVRMGCYISNHFFRVDKGFVAQTSD 83
Query: 84 VVGGRSAPMNEVQRVEAEKTVVGE-FSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
VVGGRS PMN Q EA KTV E VKH G+LSMGRY DPNS ASSFS+LLG APH
Sbjct: 84 VVGGRSLPMNAEQEAEAGKTVPLEVVRGVKHHAGVLSMGRYDDPNSGASSFSVLLGSAPH 143
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDT----------E 192
LD Y F KVT+G ETLRKLE LPT++EGIFVMP +RITI ++Y+Y +
Sbjct: 144 LDMVYTAFAKVTEGMETLRKLEELPTKREGIFVMPLKRITIQATYWYRVNRPEPTLTLPD 203
Query: 193 MEICEKERSVLKRRLTASVIEIERQRMKCFP 223
++CE + L R + E++R R KC P
Sbjct: 204 TKVCEDDLHELTLRFASQAEELQRVRKKCLP 234
>gi|159487170|ref|XP_001701608.1| cyclophilin-like protein [Chlamydomonas reinhardtii]
gi|158271549|gb|EDO97366.1| cyclophilin-like protein [Chlamydomonas reinhardtii]
Length = 235
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 147/211 (69%), Gaps = 11/211 (5%)
Query: 24 PQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVAD 83
P + RVVFQT YGDI FGF+P VAP T HIFKLVR+GCY +NHFFRVDKGFVAQ +D
Sbjct: 24 PVMSDERVVFQTEYGDITFGFWPEVAPVTCAHIFKLVRMGCYISNHFFRVDKGFVAQTSD 83
Query: 84 VVGGRSAPMNEVQRVEAEKTVVGE-FSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
VVGGRS PMN Q EA KTV E VKH G+LSM R +D N A SSFS+LLG APH
Sbjct: 84 VVGGRSLPMNAEQEAEAGKTVPLEVVRGVKHHAGVLSMARGADKNGARSSFSVLLGSAPH 143
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDT----------E 192
LD +YA+FGKVT+G ETLRKLE LPT++EGIFVMP +RITI ++Y+Y +
Sbjct: 144 LDMEYAIFGKVTEGMETLRKLEELPTKREGIFVMPLKRITIQATYWYRVNRPEPTLTLPD 203
Query: 193 MEICEKERSVLKRRLTASVIEIERQRMKCFP 223
++CE + L R + E++R R KC P
Sbjct: 204 TKVCEDDLHELTLRFASQAEELQRVRKKCLP 234
>gi|303275568|ref|XP_003057078.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461430|gb|EEH58723.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 243
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 149/218 (68%), Gaps = 14/218 (6%)
Query: 20 SQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVA 79
++ P+L R+VFQT GDIE F+P VAP TV HI L R G Y TNHFFRVD GFVA
Sbjct: 24 ARASPRLSDERLVFQTTKGDIEMAFFPDVAPTTVAHILDLARRGLYTTNHFFRVDAGFVA 83
Query: 80 QVADVV-GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLG 138
QVADV GGRSAP++ QR A +T+ GEFSDVKH RGILSMGR++DPNSA SSFSILLG
Sbjct: 84 QVADVASGGRSAPLDAYQREIARRTLPGEFSDVKHARGILSMGRHADPNSATSSFSILLG 143
Query: 139 DAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEI--- 195
DAPHLD +YAVFGKV G+ETLR +E + T+K+GIFVMPTERI I SSY + E
Sbjct: 144 DAPHLDKEYAVFGKVISGEETLRAMEAVKTKKDGIFVMPTERIEILSSYVKEKEGGGGGE 203
Query: 196 ----------CEKERSVLKRRLTASVIEIERQRMKCFP 223
CE E K+R+ A V EIE R + P
Sbjct: 204 RGNVGALGGDCEAELKETKQRVVALVHEIEEIRRRKLP 241
>gi|212723372|ref|NP_001131718.1| uncharacterized protein LOC100193083 precursor [Zea mays]
gi|194692328|gb|ACF80248.1| unknown [Zea mays]
gi|414591697|tpg|DAA42268.1| TPA: hypothetical protein ZEAMMB73_576084 [Zea mays]
Length = 170
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/135 (79%), Positives = 120/135 (88%), Gaps = 2/135 (1%)
Query: 21 QEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ 80
DP LGSARVVFQTN+GDIEFGF+P VAP+TV+HIFKLVRLGCY TNHFFRVDKGFVAQ
Sbjct: 27 SSDPNLGSARVVFQTNFGDIEFGFFPHVAPKTVEHIFKLVRLGCYITNHFFRVDKGFVAQ 86
Query: 81 VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
VADV+ GR+APMNE Q+ EAEKT+VGEFS VKHVRGILSMGR+SDP+SA SSFSILLG++
Sbjct: 87 VADVMSGRTAPMNEEQKKEAEKTIVGEFSSVKHVRGILSMGRHSDPDSAGSSFSILLGNS 146
Query: 141 PHLDGQYAVFGKVTK 155
PHLDGQ VF +K
Sbjct: 147 PHLDGQ--VFNTTSK 159
>gi|194695552|gb|ACF81860.1| unknown [Zea mays]
Length = 139
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/138 (73%), Positives = 120/138 (86%)
Query: 85 VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
+ GR+APMNE Q+ EAEKT+VGEFS VKHVRGILSMGR+SDP+SA SSFSILLG++PHLD
Sbjct: 1 MSGRTAPMNEEQKKEAEKTIVGEFSSVKHVRGILSMGRHSDPDSAGSSFSILLGNSPHLD 60
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSVLK 204
GQYAVFG+VTKGD+TL KLE LPTR+EGIFVMP ERI I S+YYYD ++E CE E+S+L+
Sbjct: 61 GQYAVFGRVTKGDDTLTKLERLPTRREGIFVMPIERINILSTYYYDIDLESCEAEKSILR 120
Query: 205 RRLTASVIEIERQRMKCF 222
RRL+ S E+ER R KCF
Sbjct: 121 RRLSESASEVERWRRKCF 138
>gi|255076607|ref|XP_002501978.1| predicted protein [Micromonas sp. RCC299]
gi|226517243|gb|ACO63236.1| predicted protein [Micromonas sp. RCC299]
Length = 159
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/158 (65%), Positives = 120/158 (75%), Gaps = 1/158 (0%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
VVFQT GDIE FYP VAP T HI L R G Y +NHFFRVDKGFVAQV VVGGR
Sbjct: 1 VVFQTTKGDIELAFYPDVAPVTSAHILDLCRRGLYISNHFFRVDKGFVAQVDGVVGGRRI 60
Query: 91 PMNEVQRVEAEKTVVGEFS-DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
PM+ QR A K + GEFS DVKH G LSMGRY DPNSA SSFSILLGDAPHLDGQYA+
Sbjct: 61 PMDAYQREVASKKLPGEFSNDVKHTFGTLSMGRYDDPNSATSSFSILLGDAPHLDGQYAI 120
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSY 187
FG++T+G+ L+ ++ +PT++EGIFVMP ERI I ++Y
Sbjct: 121 FGRITRGEAALQAMQQVPTKREGIFVMPEERIEILATY 158
>gi|384252904|gb|EIE26379.1| cyclophilin-like protein [Coccomyxa subellipsoidea C-169]
Length = 230
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 138/203 (67%), Gaps = 7/203 (3%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
+L R+VFQT +G+IE YP VAP T HI KL +LG YN+ HFFRVDKGFVAQ ADV
Sbjct: 29 RLSDERIVFQTTFGNIEMAVYPEVAPITARHILKLAKLGAYNSVHFFRVDKGFVAQTADV 88
Query: 85 VGGR--SAPMNEVQRVEAEKTVVGE-FSDVKH-VRGILSMGRYSDPNSAASSFSILLGDA 140
V GR AP++ Q + +K V E +VKH RGILSMGR+SDP+S SSFSILLG A
Sbjct: 89 VYGRLEGAPLDARQMEDGDKFVPLEVLPEVKHDRRGILSMGRHSDPDSGKSSFSILLGPA 148
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKER 200
PHLD QY +FG+VTKG ETL K E + T+K+GIFVMP ERITIHSSY Y + CEKE
Sbjct: 149 PHLDMQYTIFGEVTKGFETLSKFEEVETKKDGIFVMPKERITIHSSYVY---CDKCEKET 205
Query: 201 SVLKRRLTASVIEIERQRMKCFP 223
+ R+ + E++ R P
Sbjct: 206 AFHTHRIESLSKELQTCRAARLP 228
>gi|307103445|gb|EFN51705.1| hypothetical protein CHLNCDRAFT_13084 [Chlorella variabilis]
Length = 157
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 117/157 (74%), Gaps = 2/157 (1%)
Query: 33 FQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPM 92
QT +GD+ FYP+VAP+T DHI + LG YNTNHFFRVDKGFVAQVAD+ GGR APM
Sbjct: 1 LQTAFGDVHMAFYPNVAPKTADHIRRCAELGLYNTNHFFRVDKGFVAQVADISGGRLAPM 60
Query: 93 NEVQRVEAEKTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ +Q+ A + V E DVKH RGILSM R DPNS SSFS+LLG APHLD YAVF
Sbjct: 61 SRMQQEVATRHVPLELHPDVKHDRRGILSMARNDDPNSGGSSFSLLLGPAPHLDQHYAVF 120
Query: 151 GKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSY 187
G+V +G ETL +LE LPTR EGIFVMP ERITI S+Y
Sbjct: 121 GEVVEGIETLARLEELPTRTEGIFVMPIERITISSTY 157
>gi|449526509|ref|XP_004170256.1| PREDICTED: uncharacterized protein LOC101224664, partial [Cucumis
sativus]
Length = 214
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/105 (88%), Positives = 97/105 (92%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
T +S +D LGSARVVFQTNYGDIEFGF+P VAP+TVDHIFKLVRLGCYNTNHFFRVDKG
Sbjct: 110 TITSAQDSHLGSARVVFQTNYGDIEFGFFPKVAPRTVDHIFKLVRLGCYNTNHFFRVDKG 169
Query: 77 FVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMG 121
FVAQVADVVGGR APMNE QR EAEKTVVGEFSDVKHVRGILSMG
Sbjct: 170 FVAQVADVVGGRLAPMNEEQRTEAEKTVVGEFSDVKHVRGILSMG 214
>gi|308810441|ref|XP_003082529.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
gi|116060998|emb|CAL56386.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
Length = 260
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 122/171 (71%), Gaps = 7/171 (4%)
Query: 24 PQLGSARVVFQTNYGDIEFGFY----PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVA 79
P+ S R V QT GD+ Y +VAP T+ H+ ++++LG Y TNH FR+DKGFVA
Sbjct: 44 PKRSSERYVLQTTRGDLTLALYDDEEENVAPLTIAHVREMLKLGMYATNHVFRIDKGFVA 103
Query: 80 QVADVVGGRSAPMNEVQRVEAEKTVVGEFSDV-KHVRGILSMGRYSDPNSAASSFSILLG 138
Q+ADV GGR A MN Q AEKTV GEF + KH RG LSM R+ DP+SA SSFS+LLG
Sbjct: 104 QIADVKGGRRAAMNTAQTRLAEKTVKGEFKNQPKHSRGRLSMARWDDPDSATSSFSVLLG 163
Query: 139 DAPHLDGQYAVFGKVT--KGDETLRKLEGLPTRKEGIFVMPTERITIHSSY 187
DAPHLDG+YAVFG+V + + TLR+LE + T++EGIFVMP ER+ I ++Y
Sbjct: 164 DAPHLDGKYAVFGEVVGEESEATLRRLEAMETKREGIFVMPKERVEILATY 214
>gi|145353185|ref|XP_001420903.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581139|gb|ABO99196.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 160
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/160 (58%), Positives = 114/160 (71%), Gaps = 3/160 (1%)
Query: 31 VVFQTNYGDIEFGFYP--SVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGR 88
+V QT GD+ Y A T H+ + LG Y+TNHFFRVD GFVAQ+AD GGR
Sbjct: 1 LVMQTTLGDVTLALYDHDDAARATAAHVLEAFELGLYDTNHFFRVDAGFVAQIADCAGGR 60
Query: 89 SAPMNEVQRVEAEKTVVGEF-SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
A M+E QR A +TV GEF + VKH RG LSM R+SDP+SA SSFS++LG APHLDG+Y
Sbjct: 61 RAAMSERQRELATRTVRGEFDASVKHARGKLSMARWSDPDSATSSFSVMLGTAPHLDGEY 120
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSY 187
AVFG++ +G+ETLRK+E + T K GIFVMP ERI I S+Y
Sbjct: 121 AVFGEMVEGEETLRKIEAVETTKSGIFVMPKERIEILSTY 160
>gi|414591696|tpg|DAA42267.1| TPA: hypothetical protein ZEAMMB73_576084 [Zea mays]
Length = 164
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 93/100 (93%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
DP LGSARVVFQTN+GDIEFGF+P VAP+TV+HIFKLVRLGCY TNHFFRVDKGFVAQVA
Sbjct: 29 DPNLGSARVVFQTNFGDIEFGFFPHVAPKTVEHIFKLVRLGCYITNHFFRVDKGFVAQVA 88
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGR 122
DV+ GR+APMNE Q+ EAEKT+VGEFS VKHVRGILSMGR
Sbjct: 89 DVMSGRTAPMNEEQKKEAEKTIVGEFSSVKHVRGILSMGR 128
>gi|449495962|ref|XP_004159997.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans
isomerase-like 2-like [Cucumis sativus]
Length = 125
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/113 (72%), Positives = 94/113 (83%)
Query: 111 VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRK 170
V + + RY DP+SA SSFS+LLGDAPHLDG YA+FGKVTKGD+TL KLE LPTR+
Sbjct: 13 VHRFKFTCDLRRYDDPDSAQSSFSMLLGDAPHLDGTYAIFGKVTKGDDTLXKLEELPTRR 72
Query: 171 EGIFVMPTERITIHSSYYYDTEMEICEKERSVLKRRLTASVIEIERQRMKCFP 223
EGIFVMPTERITI SSYYYDT ++ CE++RS LKRRL AS +EIERQRMKCFP
Sbjct: 73 EGIFVMPTERITILSSYYYDTNLDSCEEDRSTLKRRLAASFVEIERQRMKCFP 125
>gi|412986772|emb|CCO15198.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Bathycoccus
prasinos]
Length = 232
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 112/181 (61%), Gaps = 5/181 (2%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
+L V Q +YG++E GFY A T DHI K +LG Y+TNH FRVDK FVAQ+AD
Sbjct: 30 ELRKETVTMQLSYGNVELGFYKDEASNTADHILKAFKLGLYDTNHVFRVDKNFVAQIADC 89
Query: 85 VGGRSAPMNEVQRVEAEKTVVGEF--SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
+ R + Q A K + GE +KH +G LSM R++DP+S +SFSILLGDAPH
Sbjct: 90 MTSRRVGLTFEQNEHARKKIRGEHVGQTIKHRKGTLSMARFNDPDSGTTSFSILLGDAPH 149
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYY---DTEMEICEKE 199
LDGQY FG++ G E L +L+ L T K GIFVMP ERI I S+Y D + C KE
Sbjct: 150 LDGQYCQFGELISGFEVLDELQKLETTKSGIFVMPKERIEIMSTYVTSGGDGDNNNCAKE 209
Query: 200 R 200
+
Sbjct: 210 K 210
>gi|410723316|ref|ZP_11362558.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Clostridium sp. Maddingley MBC34-26]
gi|410603273|gb|EKQ57710.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Clostridium sp. Maddingley MBC34-26]
Length = 226
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 88/154 (57%), Gaps = 5/154 (3%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
T+SSQE+ L A + + YGDI+ YP +AP TV++ L Y+ F RV KG
Sbjct: 47 TSSSQENKNLPIATITVE-GYGDIKAELYPEIAPNTVNNFIYLANKNFYDNLKFHRVIKG 105
Query: 77 FVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSI 135
F+ Q D G G P +E E T G + +KH +G+LSM R DPNSA S F I
Sbjct: 106 FMIQGGDPKGNGTGGPG---YSIEGEFTSNGFANSLKHTKGVLSMARTQDPNSAGSQFFI 162
Query: 136 LLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTR 169
+ GDAP+LDG+YA FGKV G E + K++ + T
Sbjct: 163 MSGDAPNLDGEYAAFGKVISGLEIVDKIQNVETN 196
>gi|220930442|ref|YP_002507351.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulolyticum H10]
gi|220000770|gb|ACL77371.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
cellulolyticum H10]
Length = 208
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 101/193 (52%), Gaps = 22/193 (11%)
Query: 7 IFLTLITLIGTASSQEDPQL--GSARVVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLG 63
IF L++ G SQ + G R+ F+ GD + F YP AP+TV++ L G
Sbjct: 18 IFTILLSGCGKPGSQSNSNQPSGHPRIQFEMEGGDKMTFELYPEYAPETVENFVSLAESG 77
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-------VKHVRG 116
YN F R+ KGF+ Q D G S ++K + GEFS +KH +G
Sbjct: 78 FYNGLTFHRIIKGFMVQGGDPNGNGSG--------GSDKNIKGEFSSNGFTQNTLKHTKG 129
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE----G 172
I+SM R +DP+SA+S F I+ G A LDG YA FGK+T G+ETL K+ P + G
Sbjct: 130 IISMARSNDPDSASSQFFIMDGTAATLDGGYAAFGKLTSGEETLDKIASTPVKANPSMRG 189
Query: 173 IFVMPTERITIHS 185
+PTE++ I S
Sbjct: 190 EVSVPTEKVIIKS 202
>gi|196230939|ref|ZP_03129799.1| Peptidylprolyl isomerase [Chthoniobacter flavus Ellin428]
gi|196224769|gb|EDY19279.1| Peptidylprolyl isomerase [Chthoniobacter flavus Ellin428]
Length = 198
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 6/179 (3%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L+ +TL ++ ED ++ V +T+ G++ F+P VAP+TV + KL + G YN
Sbjct: 14 LSAVTLFPNSARAEDKEV----AVLKTSQGEMVIEFWPDVAPKTVANFIKLAKAGFYNGT 69
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNS 128
F R+ GF+ Q D + + A++ + EF+D H G++SM R +DP+S
Sbjct: 70 AFHRIIDGFMIQGGDPLTKDPSMEGRWGTGHADERIKAEFNDHHHEFGVISMARSADPDS 129
Query: 129 AASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPT--RKEGIFVMPTERITIHS 185
A+S F I LG P LDG+Y FGK+ KG++TLRKL P G P R+ + S
Sbjct: 130 ASSQFFICLGPTPQLDGKYTAFGKLIKGEDTLRKLGKTPVGPSPNGENSKPQSRVALES 188
>gi|326202484|ref|ZP_08192353.1| Peptidylprolyl isomerase [Clostridium papyrosolvens DSM 2782]
gi|325987602|gb|EGD48429.1| Peptidylprolyl isomerase [Clostridium papyrosolvens DSM 2782]
Length = 208
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 100/193 (51%), Gaps = 22/193 (11%)
Query: 7 IFLTLITLIGTASSQ--EDPQLGSARVVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLG 63
+F L++ G SQ D G + F+ GD + F YP AP+TV++ L + G
Sbjct: 18 LFTVLLSGCGKPGSQGSSDQPSGHPNIQFEMENGDKMTFELYPEYAPETVNNFVSLAKSG 77
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-------VKHVRG 116
YN F R+ KGF+ Q D G S ++K + GEFS + H +G
Sbjct: 78 FYNGLTFHRIIKGFMIQGGDPKGDGSG--------GSDKDIKGEFSSNGFTQNTLNHTKG 129
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE----G 172
I+SM R DPNSA+S F I+ G A +LDG+YA FGK+ G+ETL K+ P + G
Sbjct: 130 IISMARSGDPNSASSQFFIMDGPAANLDGEYAAFGKLISGEETLDKIASTPVKANPNARG 189
Query: 173 IFVMPTERITIHS 185
+PTE++ I +
Sbjct: 190 EVSLPTEKVVIKA 202
>gi|391228067|ref|ZP_10264274.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Opitutaceae bacterium TAV1]
gi|391223560|gb|EIQ01980.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Opitutaceae bacterium TAV1]
Length = 212
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V T YGD+ F+P VAP TV++ KL R G Y+ F R+ KGF+ Q
Sbjct: 42 GKEVAVISTTYGDMTIAFWPEVAPNTVENFKKLARDGFYDHTAFHRIIKGFMIQ-GGCPN 100
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ +A + EF+ HVRG++SM R SDP+SA S F I GDA LD Q
Sbjct: 101 TKPGATGTPGTGDAGYKIKAEFNSKSHVRGVISMARSSDPDSAGSQFFICHGDAKFLDRQ 160
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGI-FVMPTERITIHS 185
Y FG++ GD+ L K+ PTR +G P +RI + S
Sbjct: 161 YTAFGQLIAGDDVLDKIATAPTRPDGRENSTPRDRIEVKS 200
>gi|373853795|ref|ZP_09596594.1| Peptidylprolyl isomerase [Opitutaceae bacterium TAV5]
gi|372473322|gb|EHP33333.1| Peptidylprolyl isomerase [Opitutaceae bacterium TAV5]
Length = 212
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V T YGD+ F+P VAP TV++ KL R G Y+ F R+ KGF+ Q
Sbjct: 42 GKEVAVISTTYGDMTIAFWPEVAPNTVENFKKLARDGFYDHTAFHRIIKGFMIQ-GGCPN 100
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ +A + EF+ HVRG++SM R SDP+SA S F I GDA LD Q
Sbjct: 101 TKPGATGTPGTGDAGYKIKAEFNSRSHVRGVISMARSSDPDSAGSQFFICHGDAKFLDRQ 160
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGI-FVMPTERITIHS 185
Y FG++ GD+ L K+ PTR +G P +RI + S
Sbjct: 161 YTAFGQLIAGDDVLDKIATAPTRPDGRENSTPRDRIEVKS 200
>gi|376262979|ref|YP_005149699.1| peptidyl-prolyl cis-trans isomerase [Clostridium sp. BNL1100]
gi|373946973|gb|AEY67894.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Clostridium sp. BNL1100]
Length = 207
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 97/192 (50%), Gaps = 21/192 (10%)
Query: 7 IFLTLITLIGTASSQ--EDPQLGSARVVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLG 63
IF L++ G SQ + G ++ F+ GD + F YP AP+TV + L G
Sbjct: 18 IFTVLLSGCGKPGSQGSSNQPSGHPKIQFEMENGDKMTFELYPEYAPETVKNFVSLAESG 77
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-------VKHVRG 116
YN F R+ KGF+ Q D G S ++K + GEFS + H +G
Sbjct: 78 FYNGLTFHRIIKGFMVQGGDPNGNGSG--------GSDKNIKGEFSSNGFTQNTLNHTKG 129
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTR---KEGI 173
I+SM R DP+SA+S F I+ G A LDG+YA FGK+T G+ETL K+ P G
Sbjct: 130 IISMARSGDPDSASSQFFIMDGTAATLDGEYAAFGKLTSGEETLDKIANTPVELDPNSGE 189
Query: 174 FVMPTERITIHS 185
PTE++ I +
Sbjct: 190 VSHPTEKVIIKT 201
>gi|300870161|ref|YP_003785032.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli
95/1000]
gi|404475504|ref|YP_006706935.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli B2904]
gi|431806793|ref|YP_007233691.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli
P43/6/78]
gi|434382601|ref|YP_006704384.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli WesB]
gi|300687860|gb|ADK30531.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli
95/1000]
gi|404431250|emb|CCG57296.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli WesB]
gi|404436993|gb|AFR70187.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli B2904]
gi|430780152|gb|AGA65436.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli
P43/6/78]
Length = 188
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 4 VIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLG 63
++ FL +IT +Q+ P+ + +T+YG IE FYP AP+ V+ I KL G
Sbjct: 8 ILLSFLAIITFTAVLLAQK-PKTSKEHLFIETDYGTIEIAFYPDKAPKHVEAIKKLANEG 66
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV-GEFSDVKHVRGILSMGR 122
YN F RV GF+ Q D + + P + V+ EF+DV H RGI SM R
Sbjct: 67 FYNGTLFHRVIPGFMIQGGDPLSKQ--PNRALHGTGGPDFVIPAEFNDVSHKRGICSMAR 124
Query: 123 YSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGL 166
+ NSA S F I + D+P LDGQY V+G+V KG +T+ K+ L
Sbjct: 125 SQNINSAGSQFFICVADSPFLDGQYTVWGEVIKGMDTVDKIVNL 168
>gi|150015442|ref|YP_001307696.1| peptidyl-prolyl isomerase [Clostridium beijerinckii NCIMB 8052]
gi|149901907|gb|ABR32740.1| Peptidylprolyl isomerase [Clostridium beijerinckii NCIMB 8052]
Length = 226
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 78/133 (58%), Gaps = 4/133 (3%)
Query: 37 YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEV 95
+G+I+ YP +AP TV++ L G YN F RV KGF+ Q D G G P
Sbjct: 67 FGEIQAELYPEIAPNTVNNFIYLANKGFYNNLKFHRVIKGFMIQGGDPQGNGTGGPG--- 123
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+E E T G + +KH +G+LSM R DPNSA S F I+ GDAP+LDG+YA FGKV
Sbjct: 124 YSIEGEFTSNGFANSLKHTKGVLSMARAQDPNSAGSQFFIMSGDAPNLDGEYAAFGKVIS 183
Query: 156 GDETLRKLEGLPT 168
G + + K++ + T
Sbjct: 184 GLDIVDKIQNVET 196
>gi|187932355|ref|YP_001884870.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
botulinum B str. Eklund 17B]
gi|187720508|gb|ACD21729.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
botulinum B str. Eklund 17B]
Length = 228
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
+YG IE YP AP TV++ L G YN F R+ K F+ Q D G G P
Sbjct: 68 DYGVIEAVLYPETAPNTVNNFIDLANKGFYNNLKFHRIIKDFMIQGGDPKGDGTGGPG-- 125
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
+E E G + +KH +G+LSM R +PNSA S F I+ GDAPHLDG+YA FGKV
Sbjct: 126 -YSIEGEFASNGIPNGLKHTKGVLSMARSQNPNSAGSQFFIMTGDAPHLDGEYAAFGKVV 184
Query: 155 KGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
G + L K+ + T+ + I P + + I S
Sbjct: 185 SGFDVLDKIGSVKTKSQDI---PKDDVIIES 212
>gi|408403935|ref|YP_006861918.1| peptidyl-prolyl cis-trans isomerase [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408364531|gb|AFU58261.1| putative peptidyl-prolyl cis-trans isomerase [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 164
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 75/133 (56%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
QT +GDI F+P AP+TV++ KL + G Y+ F R+ GFV Q D +A +
Sbjct: 10 QTKFGDISIEFFPDAAPKTVENFIKLAKSGFYDGLLFHRIVPGFVIQGGDPNTKSAANRS 69
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
TV EF+ KH RG LSM R DPNSA S F I+L DA LDGQY VFG+V
Sbjct: 70 RWGTGGPGWTVKAEFNKNKHSRGALSMARAQDPNSAGSQFFIVLKDANFLDGQYTVFGRV 129
Query: 154 TKGDETLRKLEGL 166
T G + + K+ L
Sbjct: 130 TAGMDVVDKIAAL 142
>gi|225156571|ref|ZP_03724904.1| Peptidylprolyl isomerase [Diplosphaera colitermitum TAV2]
gi|224802803|gb|EEG21052.1| Peptidylprolyl isomerase [Diplosphaera colitermitum TAV2]
Length = 190
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 16 GTASSQEDPQLGSAR--VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRV 73
G A+ +D + + + T GD+ F+P VAP+TV++ +L R G Y+ F R+
Sbjct: 14 GGAAPSKDAATAAGKEVAIISTTVGDMTIAFWPEVAPKTVENFKQLAREGFYDGTAFHRI 73
Query: 74 DKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSF 133
KGF+ Q + AP +A + EF+ HVRG++SM R SDPNSA S F
Sbjct: 74 IKGFMIQGGCPNSKKDAP-GIPGTGDAGYKIKAEFNSRSHVRGVISMARSSDPNSAGSQF 132
Query: 134 SILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
I GDA LD QY FG++ GD+ L K+ +PT P ER+ + S
Sbjct: 133 FICHGDAKFLDRQYTAFGQLIAGDDVLDKIANVPTSGP-ERSTPRERVEVKS 183
>gi|373852757|ref|ZP_09595557.1| Peptidylprolyl isomerase [Opitutaceae bacterium TAV5]
gi|372474986|gb|EHP34996.1| Peptidylprolyl isomerase [Opitutaceae bacterium TAV5]
Length = 172
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA---DVVGG 87
V T YGDI F+P VAP+TV++ KL R G Y+ F R+ KGF+ Q G
Sbjct: 10 AVISTAYGDITIAFWPDVAPKTVENFKKLAREGFYDGTAFHRIIKGFMIQGGCPNTKEGA 69
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
R P + + EF+ HVRG++SM R ++P+SA S F I GDA LD QY
Sbjct: 70 RGLPGTG----DPGYKIKAEFNTKSHVRGVISMARAANPDSAGSQFFICHGDARFLDRQY 125
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIF--VMPTERITIHS 185
FG++ GD+ L K+ +PT+ G P ERI + +
Sbjct: 126 TAFGELVAGDDVLEKIATVPTKSGGGGEKSTPIERIAVKT 165
>gi|293376800|ref|ZP_06623021.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Turicibacter
sanguinis PC909]
gi|325838179|ref|ZP_08166515.1| putative peptidyl-prolyl cis-trans isomerase B [Turicibacter sp.
HGF1]
gi|292644582|gb|EFF62671.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Turicibacter
sanguinis PC909]
gi|325490850|gb|EGC93151.1| putative peptidyl-prolyl cis-trans isomerase B [Turicibacter sp.
HGF1]
Length = 214
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 77/144 (53%), Gaps = 16/144 (11%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
+YG IE YP +AP TV + L+ G Y+ RVDKGFV Q D G G P +
Sbjct: 51 DYGTIEAQLYPQIAPNTVYNFISLIEKGFYDGLTIHRVDKGFVLQGGDPTGIGSGGPGYQ 110
Query: 95 VQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
+ VGEF+ D+KH G+LSM R +D +SA S F I+LG+ PHLDG YA
Sbjct: 111 I---------VGEFAANGIGNDLKHTEGVLSMARSNDMDSAGSQFFIMLGEFPHLDGSYA 161
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG 172
FGKV G + LE L +G
Sbjct: 162 AFGKVISGMDVAHALESLTVAPDG 185
>gi|391231809|ref|ZP_10268015.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Opitutaceae bacterium TAV1]
gi|391221470|gb|EIP99890.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Opitutaceae bacterium TAV1]
Length = 172
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA---DVVGG 87
V T YGDI F+P VAP+TV++ KL R G Y+ F R+ KGF+ Q G
Sbjct: 10 AVISTAYGDITIAFWPDVAPKTVENFKKLAREGFYDGTAFHRIIKGFMIQGGCPNTKEGA 69
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
R P + + EF+ HVRG++SM R ++P+SA S F I GDA LD QY
Sbjct: 70 RGLPGTG----DPGYKIKAEFNTKSHVRGVISMARAANPDSAGSQFFICHGDARFLDRQY 125
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIF--VMPTERITIHS 185
FG++ GD+ L K+ +PT+ G P ER+ + +
Sbjct: 126 TAFGELVAGDDVLEKIATVPTKSGGGGEKSTPIERVAVKT 165
>gi|225619981|ref|YP_002721238.1| peptidyl-prolyl cis-trans isomerase B [Brachyspira hyodysenteriae
WA1]
gi|225214800|gb|ACN83534.1| peptidyl-prolyl cis-trans isomerase B [Brachyspira hyodysenteriae
WA1]
Length = 191
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
L +I I L + + GT + P+ + +TN+G IE F+P AP+ V+ I KL
Sbjct: 5 LKIIIISLLGVIIFGTVLIAQKPKASKEHLFIETNFGTIEIAFFPEKAPKHVEAIKKLAN 64
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV-GEFSDVKHVRGILSM 120
G YN F RV GF+ Q D + + P + V+ EF+DV H RGI SM
Sbjct: 65 EGFYNGTLFHRVIPGFMIQGGDPLSKQ--PNRSLHGTGGPNFVIPAEFNDVSHKRGICSM 122
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGL 166
R + NSA S F I + D+P LDGQY V+G+V G + K+ L
Sbjct: 123 ARGASINSAGSQFFICVADSPFLDGQYTVWGEVVSGMDVADKIVAL 168
>gi|251777596|ref|ZP_04820516.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|243081911|gb|EES47801.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 228
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
+YG IE YP AP TV++ L G YN F R+ K F+ Q D G G P
Sbjct: 68 DYGVIEAVLYPETAPNTVNNFIDLANKGFYNNLKFHRIIKDFMIQGGDPNGDGTGGPG-- 125
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
+E E G + +KH +G+LSM R +PNS S F I+ GD+PHLDG+YA FGKV
Sbjct: 126 -YSIEGEFASNGIPNGLKHTKGVLSMARSQNPNSGGSQFFIMTGDSPHLDGEYAAFGKVV 184
Query: 155 KGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
G + L K+ + T+ + I P + + I S
Sbjct: 185 SGFDVLDKIGSVKTKSKDI---PKDDVIIES 212
>gi|188590224|ref|YP_001920027.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
botulinum E3 str. Alaska E43]
gi|188500505|gb|ACD53641.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
botulinum E3 str. Alaska E43]
Length = 228
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
+YG IE YP AP TV++ L G YN F R+ K F+ Q D G G P
Sbjct: 68 DYGVIEAVLYPETAPNTVNNFIDLANKGFYNNLKFHRIIKDFMIQGGDPNGDGTGGPG-- 125
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
+E E G + +KH +G+LSM R +PNS S F I+ GD+PHLDG+YA FGKV
Sbjct: 126 -YSIEGEFASNGIPNGLKHTKGVLSMARSQNPNSGGSQFFIMTGDSPHLDGEYAAFGKVV 184
Query: 155 KGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
G + L K+ + T+ + I P + + I S
Sbjct: 185 SGFDVLDKIGSVKTKSKDI---PKDDVIIES 212
>gi|223937969|ref|ZP_03629868.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [bacterium
Ellin514]
gi|223893370|gb|EEF59832.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [bacterium
Ellin514]
Length = 212
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 10/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T GD+ F+P VAP+TV++ KL R G Y+ F RV KGF+ Q D + ++
Sbjct: 51 AVIKTTAGDMVIQFWPDVAPKTVENFKKLAREGFYDGTAFHRVIKGFMIQGGDPLTKDAS 110
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ + + EF+D H RG++SM R +DP+SA S F I G LD QY F
Sbjct: 111 KEDAWGTGDPGYKIKAEFNDRPHERGVISMARSADPDSAGSQFFICHGSPRFLDHQYTAF 170
Query: 151 GKVTKGDETLRKLEGLPT-------RKEGIF---VMPTERI 181
GK+ KGD+ L K+ PT +++GI ++P + I
Sbjct: 171 GKLIKGDDVLEKIATTPTHPPDRPDKRQGIISVKIVPADSI 211
>gi|451821961|ref|YP_007458162.1| peptidyl-prolyl cis-trans isomerase B [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451787940|gb|AGF58908.1| peptidyl-prolyl cis-trans isomerase B [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 225
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
+S +E+ L A + YG I+ YP +AP TV++ L YN F RV K F
Sbjct: 48 SSIEENKNLPIATITVN-GYGVIKAELYPEIAPNTVNNFIDLANKNFYNNLKFHRVIKNF 106
Query: 78 VAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSIL 136
+ Q D G G P +E E T G + +KH +G+LSM R SDPNSA S F I+
Sbjct: 107 MIQGGDPKGDGTGGPG---YSIEGEFTSNGFANSLKHTKGVLSMARTSDPNSAGSQFFIM 163
Query: 137 LGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
GDA +LDG+YA FGKV G + + K++ + T P E + I S
Sbjct: 164 SGDAANLDGEYAAFGKVISGLDVVDKIQNVSTNSAD---APKEDVVITS 209
>gi|384209560|ref|YP_005595280.1| peptidyl-prolyl cis-trans isomerase B [Brachyspira intermedia
PWS/A]
gi|343387210|gb|AEM22700.1| peptidyl-prolyl cis-trans isomerase B [Brachyspira intermedia
PWS/A]
Length = 191
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
L +I I L + + GT + P+ + +TN+G IE F+P AP+ V+ I KL
Sbjct: 5 LKIIIISLLGVIVFGTVLIAQKPKTSKEHLFIETNFGTIEIAFFPEKAPKHVEAIKKLAN 64
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV-GEFSDVKHVRGILSM 120
G YN F RV GF+ Q D + + P + V+ EF+DV H RGI SM
Sbjct: 65 EGFYNGTLFHRVIPGFMIQGGDPLSKQ--PNRSLHGTGGPNFVIPAEFNDVSHKRGICSM 122
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGL 166
R + NSA S F I + D+P LDGQY V+G+V G + K+ L
Sbjct: 123 ARGASVNSAGSQFFICVADSPFLDGQYTVWGEVVSGMDVADKIVSL 168
>gi|445062373|ref|ZP_21374767.1| peptidyl-prolyl cis-trans isomerase B [Brachyspira hampsonii 30599]
gi|444506241|gb|ELV06609.1| peptidyl-prolyl cis-trans isomerase B [Brachyspira hampsonii 30599]
Length = 191
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
L +I I L + + GT + P+ + +TN+G IE F+P AP+ V+ I KL
Sbjct: 5 LKIITISLLGLIIFGTVLIAQKPKTSKEHLFIETNFGTIEIAFFPEKAPKHVEAIKKLAN 64
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV-GEFSDVKHVRGILSM 120
G Y+ F RV GF+ Q D + + P + V+ EF+DV H RGI SM
Sbjct: 65 EGFYDGTLFHRVIPGFIIQGGDPLSKQ--PNRALHGTGGPNFVIPAEFNDVSHKRGICSM 122
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGL 166
R + NSA S F I + D+P LDGQY V+G+V G + K+ L
Sbjct: 123 ARGTSINSAGSQFFICVADSPFLDGQYTVWGEVVSGMDVADKIVAL 168
>gi|118445075|ref|YP_879119.1| peptidyl-prolyl cis-trans isomerase [Clostridium novyi NT]
gi|118135531|gb|ABK62575.1| Peptidyl-prolyl cis-trans isomerase [Clostridium novyi NT]
Length = 171
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP VAP TV++ L+ G Y+ F RV GF+ Q D G G
Sbjct: 5 VTIKMENGDIIKAELYPEVAPNTVNNFISLINKGFYDGVIFHRVIPGFMIQGGDPDGTGM 64
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E T G +D+KH RG+LSM R +PNSA S F I++ DAPHLDGQYA
Sbjct: 65 GGPG---YSIKGEFTANGFKNDLKHTRGVLSMARAMNPNSAGSQFFIMVADAPHLDGQYA 121
Query: 149 VFGKVTKGDETLRKL 163
FGKVT+G E K+
Sbjct: 122 SFGKVTEGMEVADKI 136
>gi|223937970|ref|ZP_03629869.1| Peptidylprolyl isomerase [bacterium Ellin514]
gi|223893371|gb|EEF59833.1| Peptidylprolyl isomerase [bacterium Ellin514]
Length = 174
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVAD------- 83
V +T+ G++ F+P VAP+TV++ L G Y+ F R+ KGF+ Q D
Sbjct: 8 AVIKTSAGELVVEFWPDVAPKTVENFKALANKGFYDGTAFHRIVKGFMIQGGDPLTKDAS 67
Query: 84 --VVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
+ G P ++VQ EF++ HVRG+LSM R SDPNSA S F + L DA
Sbjct: 68 KESMWGTGGPGHKVQ---------AEFNERPHVRGVLSMARSSDPNSAGSQFFVCLADAR 118
Query: 142 HLDGQYAVFGKVTKGDETLRKLEGLPT--RKEGIFVMPTERITIHS 185
LD QY FGK+ KGD+ L K+ PT G P R+ + S
Sbjct: 119 FLDRQYTAFGKLLKGDDVLGKIGDTPTTMSNGGERSKPLSRVGVES 164
>gi|342732120|ref|YP_004770959.1| peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455532|ref|YP_005668127.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|417965806|ref|ZP_12607285.1| Peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-4]
gi|417966193|ref|ZP_12607595.1| Peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-5]
gi|417968755|ref|ZP_12609740.1| Peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-co]
gi|418016481|ref|ZP_12656046.1| peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372372|ref|ZP_12964464.1| Peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329575|dbj|BAK56217.1| peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506816|gb|EGX29110.1| peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346983875|dbj|BAK79551.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|380335767|gb|EIA25880.1| Peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-4]
gi|380339009|gb|EIA27821.1| Peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-co]
gi|380342041|gb|EIA30486.1| Peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|380343327|gb|EIA31715.1| Peptidyl-prolyl cis-trans isomerase [Candidatus Arthromitus sp.
SFB-5]
Length = 175
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 4/129 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N+G+I+F YP +AP TV + LV G YN F R+ K FV Q +G G P
Sbjct: 13 NFGEIKFELYPEIAPVTVTNFIDLVNKGYYNGLTFHRIIKDFVIQGGCPLGSGVGGPG-- 70
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E + G +D+KH G+LSM R +DPNS S F I++G++PHLDG YA FGKVT
Sbjct: 71 -YSIKGEFKINGVKNDIKHELGVLSMARANDPNSGGSQFFIMVGNSPHLDGSYAAFGKVT 129
Query: 155 KGDETLRKL 163
G E + +
Sbjct: 130 DGIEIILNI 138
>gi|182414265|ref|YP_001819331.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Opitutus
terrae PB90-1]
gi|177841479|gb|ACB75731.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Opitutus
terrae PB90-1]
Length = 173
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ +T YG++E F+P VAP+TV++ KL R Y+ F R+ KGF+ Q R
Sbjct: 11 AIIKTTYGEMELAFWPDVAPKTVENFKKLAREKFYDGTAFHRIIKGFMIQ-GGCPNTRQG 69
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ EF+ HVRG++SM R + P+SA S F I GDA LD QY F
Sbjct: 70 ETGMPGTGGPGYKIKAEFNTKSHVRGVISMARSAHPDSAGSQFFICHGDAKFLDRQYTAF 129
Query: 151 GKVTKGDETLRKLEGLPTRK--EGIFVMPTERITIHS 185
G++ KGD+ L ++ +PT G P +R+ I S
Sbjct: 130 GELVKGDDVLERIATVPTEHGGGGEKSTPIDRVEIES 166
>gi|417963148|ref|ZP_12605177.1| Peptidyl-prolyl cis-trans isomerase, partial [Candidatus
Arthromitus sp. SFB-3]
gi|380334182|gb|EIA24638.1| Peptidyl-prolyl cis-trans isomerase, partial [Candidatus
Arthromitus sp. SFB-3]
Length = 154
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 4/129 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N+G+I+F YP +AP TV + LV G YN F R+ K FV Q +G G P
Sbjct: 13 NFGEIKFELYPEIAPVTVTNFIDLVNKGYYNGLTFHRIIKDFVIQGGCPLGSGVGGPG-- 70
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E + G +D+KH G+LSM R +DPNS S F I++G++PHLDG YA FGKVT
Sbjct: 71 -YSIKGEFKINGVKNDIKHELGVLSMARANDPNSGGSQFFIMVGNSPHLDGSYAAFGKVT 129
Query: 155 KGDETLRKL 163
G E + +
Sbjct: 130 DGIEIILNI 138
>gi|169342762|ref|ZP_02863798.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens C str. JGS1495]
gi|169299019|gb|EDS81091.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens C str. JGS1495]
Length = 210
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N+G IE YP+ AP TVD+ L G Y+ R+ KGFV Q D +
Sbjct: 49 NFGTIEAELYPNKAPNTVDNFISLANSGFYDGLTIHRIVKGFVLQGGDPK--GTGTGGPG 106
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++ E + G +D+KH GILSM R +P+SA S F I+ +APHLDGQYA FGKVTK
Sbjct: 107 YMIKGEFSSNGVENDIKHEEGILSMARSQNPDSAGSQFFIVTKEAPHLDGQYAAFGKVTK 166
Query: 156 GDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKER 200
G + + ++E + G P E + I S +E E E+
Sbjct: 167 GLDVVHEIEKVSV---GANDKPVEDVVIESIKVDTKGIEYNEPEK 208
>gi|168209361|ref|ZP_02634986.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens B str. ATCC 3626]
gi|168213537|ref|ZP_02639162.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens CPE str. F4969]
gi|168217688|ref|ZP_02643313.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens NCTC 8239]
gi|422346235|ref|ZP_16427149.1| hypothetical protein HMPREF9476_01222 [Clostridium perfringens
WAL-14572]
gi|170712492|gb|EDT24674.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens B str. ATCC 3626]
gi|170714899|gb|EDT27081.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens CPE str. F4969]
gi|182380250|gb|EDT77729.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens NCTC 8239]
gi|373226857|gb|EHP49179.1| hypothetical protein HMPREF9476_01222 [Clostridium perfringens
WAL-14572]
Length = 210
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N+G IE YP+ AP TVD+ L G Y+ R+ KGFV Q D +
Sbjct: 49 NFGTIEAELYPNKAPNTVDNFISLANSGFYDGLTIHRIVKGFVLQGGDPK--GTGTGGPG 106
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++ E + G +D+KH GILSM R +P+SA S F I+ +APHLDGQYA FGKVTK
Sbjct: 107 YMIKGEFSSNGVENDIKHEEGILSMARSQNPDSAGSQFFIVTKEAPHLDGQYAAFGKVTK 166
Query: 156 GDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKER 200
G + + ++E + G P E + I S +E E E+
Sbjct: 167 GLDVVHEIEKVSV---GANDKPVEDVVIESIKVDTKGIEYKEPEK 208
>gi|168206794|ref|ZP_02632799.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens E str. JGS1987]
gi|170661784|gb|EDT14467.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens E str. JGS1987]
Length = 210
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N+G IE YP+ AP TVD+ L G Y+ R+ KGFV Q D +
Sbjct: 49 NFGTIEAELYPNKAPNTVDNFISLANSGFYDGLTIHRIVKGFVLQGGDPK--GTGTGGPG 106
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++ E + G +D+KH GILSM R +P+SA S F I+ +APHLDGQYA FGKVTK
Sbjct: 107 YMIKGEFSSNGVENDIKHEEGILSMARSQNPDSAGSQFFIVTKEAPHLDGQYAAFGKVTK 166
Query: 156 GDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKER 200
G + + ++E + G P E + I S +E E E+
Sbjct: 167 GLDVVHEIEKVSV---GANDKPVEDVVIESIKVDTKGIEYKEPEK 208
>gi|110803433|ref|YP_698856.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens SM101]
gi|110683934|gb|ABG87304.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens SM101]
Length = 195
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N+G IE YP+ AP TVD+ L G Y+ R+ KGFV Q D +
Sbjct: 34 NFGTIEAELYPNKAPNTVDNFISLANSGFYDGLTIHRIVKGFVLQGGDPK--GTGTGGPG 91
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++ E + G +D+KH GILSM R +P+SA S F I+ +APHLDGQYA FGKVTK
Sbjct: 92 YMIKGEFSSNGVENDIKHEEGILSMARSQNPDSAGSQFFIVTKEAPHLDGQYAAFGKVTK 151
Query: 156 GDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKER 200
G + + ++E + G P E + I S +E E E+
Sbjct: 152 GLDVVHEIEKISV---GANDKPVEDVVIESIKVDTKGIEYKEPEK 193
>gi|429124122|ref|ZP_19184654.1| peptidyl-prolyl cis-trans isomerase B [Brachyspira hampsonii 30446]
gi|426279852|gb|EKV56871.1| peptidyl-prolyl cis-trans isomerase B [Brachyspira hampsonii 30446]
Length = 191
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
L +I I L + + GT + P+ + +TN+G IE F+P AP+ V+ I KL
Sbjct: 5 LKIITISLLGLIIFGTVLIAQKPKTSKEHLFIETNFGTIEIAFFPEKAPKHVEAIKKLAN 64
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV-GEFSDVKHVRGILSM 120
G Y+ F RV GF+ Q D + + P + V+ EF+D+ H RGI SM
Sbjct: 65 EGFYDGTLFHRVIPGFMIQGGDPLSKQ--PNRALHGTGGPNFVIPAEFNDISHKRGICSM 122
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGL 166
R + NSA S F I + D+P LDGQY V+G+V G + K+ L
Sbjct: 123 ARGTSINSAGSQFFICVADSPFLDGQYTVWGEVVSGMDVADKIVAL 168
>gi|329925211|ref|ZP_08280154.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Paenibacillus sp. HGF5]
gi|328940044|gb|EGG36377.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Paenibacillus sp. HGF5]
Length = 240
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 23 DPQLGSARVVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQV 81
DP V + G I+ YP VAP TV++ LV G Y+ F RV GF+ Q
Sbjct: 65 DPNASHPIVTIEMENGKTIKLELYPEVAPNTVNNFISLVEQGFYDGTGFHRVIPGFMIQG 124
Query: 82 ADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
D G G P + E T G +D+KH G+LSM R DPNSA S F I++ DA
Sbjct: 125 GDPDGNGTGGPG---YAIAGEFTSNGFQNDLKHTTGVLSMARAQDPNSAGSQFFIMVADA 181
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGL 166
P LD QYA FGKV +G ET ++ GL
Sbjct: 182 PSLDAQYASFGKVIEGMETAEEIVGL 207
>gi|110798721|ref|YP_696253.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
perfringens ATCC 13124]
gi|110673368|gb|ABG82355.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens ATCC 13124]
Length = 195
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N+G IE YP+ AP TVD+ L G Y+ R+ KGFV Q D +
Sbjct: 34 NFGTIEAELYPNKAPNTVDNFISLANSGFYDGLTIHRIVKGFVLQGGDPK--GTGTGGPG 91
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++ E + G +D+KH GILSM R +P+SA S F I+ +APHLDGQYA FGKVTK
Sbjct: 92 YMIKGEFSSNGVENDIKHEEGILSMARSQNPDSAGSQFFIVTKEAPHLDGQYAAFGKVTK 151
Query: 156 GDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKER 200
G + + ++E + G P E + I S +E E E+
Sbjct: 152 GLDVVHEIEKVSV---GANDKPVEDVVIESIKVDTKGIEYNEPEK 193
>gi|261405260|ref|YP_003241501.1| peptidylprolyl isomerase [Paenibacillus sp. Y412MC10]
gi|261281723|gb|ACX63694.1| Peptidylprolyl isomerase [Paenibacillus sp. Y412MC10]
Length = 241
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 23 DPQLGSARVVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQV 81
DP V + G I+ YP VAP TV++ LV G Y+ F RV GF+ Q
Sbjct: 66 DPNASHPIVTIEMENGKTIKLELYPEVAPNTVNNFISLVEQGFYDGTGFHRVIPGFMIQG 125
Query: 82 ADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
D G G P + E T G +D+KH G+LSM R DPNSA S F I++ DA
Sbjct: 126 GDPDGKGTGGPG---YAIAGEFTSNGFQNDLKHTTGVLSMARAPDPNSAGSQFFIMVADA 182
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGL 166
P LD QYA FGKV +G ET ++ GL
Sbjct: 183 PSLDAQYASFGKVIEGMETAEEIVGL 208
>gi|168185801|ref|ZP_02620436.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum C str.
Eklund]
gi|169296026|gb|EDS78159.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum C str.
Eklund]
Length = 171
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP VAP TV++ L+ G Y+ F RV GF+ Q D G G
Sbjct: 5 VTIKMQNGDIIKAELYPEVAPNTVNNFISLINKGFYDGVIFHRVIPGFMIQGGDPDGTGM 64
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E + G +D+KH RGILSM R PNSA S F I++ DAPHLDGQYA
Sbjct: 65 GGPG---YSIKGEFSANGFKNDLKHSRGILSMARAMSPNSAGSQFFIMVADAPHLDGQYA 121
Query: 149 VFGKVTKGDETLRKL 163
FGKVT+G E K+
Sbjct: 122 SFGKVTEGMEVADKI 136
>gi|402816778|ref|ZP_10866368.1| peptidylprolyl isomerase [Paenibacillus alvei DSM 29]
gi|402505680|gb|EJW16205.1| peptidylprolyl isomerase [Paenibacillus alvei DSM 29]
Length = 214
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 31 VVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
V + GD +E YP AP TV++ LV G Y+ F RV GF+ Q D
Sbjct: 67 VTIEMESGDSMEIELYPDKAPNTVNNFISLVNKGFYDGTIFHRVIPGFMIQGGDPQ---- 122
Query: 90 APMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
+ ++ GEFS D+KH G+LSM R DPNSA S F I++ DAPHL
Sbjct: 123 ----GIGIGGPGYSIKGEFSNNGVENDLKHTEGVLSMARSQDPNSAGSQFFIMVADAPHL 178
Query: 144 DGQYAVFGKVTKGDETLRKLEGLP 167
DG YA FGKV KG ET + + +P
Sbjct: 179 DGDYAAFGKVIKGMETAQAIVNVP 202
>gi|422874488|ref|ZP_16920973.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens F262]
gi|380304561|gb|EIA16849.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens F262]
Length = 210
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N+G IE YP+ +P TVD+ L G Y+ R+ KGFV Q D +
Sbjct: 49 NFGTIEAELYPNKSPNTVDNFISLANSGFYDGLTIHRIVKGFVLQGGDPK--GTGTGGPG 106
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++ E + G +D+KH GILSM R DP+SA S F I+ +APHL+GQYA FGKVTK
Sbjct: 107 YMIKGEFSSNGVENDIKHEEGILSMARSQDPDSAGSQFFIVTKEAPHLNGQYAAFGKVTK 166
Query: 156 GDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKER 200
G + + ++E + G P E + I S +E E E+
Sbjct: 167 GLDVVHEIEKVSV---GANDKPVEDVVIESIKVDTKGIEYKEPEK 208
>gi|392424164|ref|YP_006465158.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfosporosinus acidiphilus SJ4]
gi|391354127|gb|AFM39826.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfosporosinus acidiphilus SJ4]
Length = 232
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G I+ YP++AP TV + LV+ G YN F RV GF+ Q D G G P
Sbjct: 71 GIIKAELYPNIAPNTVKNFISLVKKGFYNGLTFHRVIPGFMIQGGDPSGNGTGGPG---Y 127
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
++ E T G +D+KH RG+LSM R DPNSA S F I++ AP LDG YA FGKVT G
Sbjct: 128 SIKGEFTNNGFKNDLKHTRGVLSMARTQDPNSAGSQFFIMVAAAPSLDGDYAAFGKVTSG 187
Query: 157 DETLRKLEGLP 167
+ + K+ P
Sbjct: 188 MDEVDKIVNTP 198
>gi|18310549|ref|NP_562483.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
perfringens str. 13]
gi|18145230|dbj|BAB81273.1| probable peptidyl-prolyl cis-trans isomerase B [Clostridium
perfringens str. 13]
Length = 210
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N+G IE YP+ AP TVD+ L G Y+ R+ KGFV Q D +
Sbjct: 49 NFGTIEAELYPNKAPNTVDNFISLANSGFYDGLTIHRIVKGFVLQGGDPK--GTGTGGPG 106
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++ E + G +D+KH GILSM R +P+SA S F I+ +APHL+GQYA FGKVTK
Sbjct: 107 YMIKGEFSSNGVENDIKHEEGILSMARSQNPDSAGSQFFIVTKEAPHLNGQYAAFGKVTK 166
Query: 156 GDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKER 200
G + + ++E + G P E + I S +E E E+
Sbjct: 167 GLDVVHEIEKVSV---GANDKPVEDVVIESIKVDTKGIEYKEPEK 208
>gi|315645632|ref|ZP_07898756.1| Peptidylprolyl isomerase [Paenibacillus vortex V453]
gi|315279110|gb|EFU42420.1| Peptidylprolyl isomerase [Paenibacillus vortex V453]
Length = 239
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 23 DPQLGSARVVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQV 81
DP V + G I+ YP VAP TV++ LV G Y+ F RV GF+ Q
Sbjct: 64 DPNASHPIVTIEMENGKTIKLELYPEVAPNTVNNFISLVEQGFYDGTGFHRVIPGFMIQG 123
Query: 82 ADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
D G G P E+ E T G +D+KH G+LSM R DPNSA S F I++ DA
Sbjct: 124 GDPDGNGTGGPDYEIA---GEFTSNGFQNDLKHTTGVLSMARAQDPNSAGSQFFIMVADA 180
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGL 166
P LD +YA FGKV +G E ++ GL
Sbjct: 181 PSLDAEYASFGKVIEGMEVAEEIVGL 206
>gi|347542203|ref|YP_004856839.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985238|dbj|BAK80913.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 180
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N+G+++F YP VAP TV + LV G Y F R+ KGFV Q +G G P
Sbjct: 18 NFGEVKFELYPEVAPITVTNFIDLVNNGYYTGLTFHRIIKGFVIQGGCPLGSGIGGPG-- 75
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E + G +++KH G+LSM R +DPNS S F I+LG+APHLDG YA FGKV
Sbjct: 76 -YSIKGEFKINGVENNIKHELGVLSMARANDPNSGGSQFFIMLGNAPHLDGSYAAFGKVI 134
Query: 155 KGDETLRKL 163
G + + +
Sbjct: 135 DGIDIILNI 143
>gi|218281669|ref|ZP_03488063.1| hypothetical protein EUBIFOR_00630 [Eubacterium biforme DSM 3989]
gi|218217235|gb|EEC90773.1| hypothetical protein EUBIFOR_00630 [Eubacterium biforme DSM 3989]
Length = 161
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 79/145 (54%), Gaps = 16/145 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
++ N I+ YP +AP+TV++ L+ Y+ F RV KGF+ Q +G G
Sbjct: 7 LITMKNGDQIKAELYPEIAPETVENFLNLIEKKFYDGLTFHRVIKGFMIQGGCPIGNGTG 66
Query: 90 APMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
P T+ GEF+ D+KH RG+LSM R DPNSA S F I+ DAPHL
Sbjct: 67 GP---------GYTIHGEFASNGFKNDLKHTRGVLSMARAMDPNSAGSQFFIMHQDAPHL 117
Query: 144 DGQYAVFGKVTKGDETLRKLEGLPT 168
DG+YA FGKV +G E + K+ PT
Sbjct: 118 DGEYAAFGKVIEGMENVDKIAKTPT 142
>gi|168334988|ref|ZP_02693105.1| Peptidylprolyl isomerase [Epulopiscium sp. 'N.t. morphotype B']
Length = 186
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 83/152 (54%), Gaps = 10/152 (6%)
Query: 37 YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQ 96
YGDI Y +AP TV + L G Y+ F RV K F+ Q D G + N
Sbjct: 24 YGDIVANLYYDIAPNTVSNFVALAEAGFYDGLIFHRVIKDFMLQGGDPEGNGTG--NAGY 81
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+++ E G +D+KH G+LSM R +PNSA+S F I+ D+PHLDG+YA FGKV G
Sbjct: 82 QIKGEFASNGYSNDIKHTEGVLSMARSMNPNSASSQFFIMSADSPHLDGEYAAFGKVISG 141
Query: 157 DETLRKLEGLPTR-----KEGIFVMPTERITI 183
E + ++E + T KE + + E+ITI
Sbjct: 142 MEIVDEIENVKTNANDRPKEDVVI---EKITI 170
>gi|116624576|ref|YP_826732.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Candidatus
Solibacter usitatus Ellin6076]
gi|116227738|gb|ABJ86447.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Candidatus
Solibacter usitatus Ellin6076]
Length = 351
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA---DVVGG 87
V +T G ++ P AP V + KL G N F R+ KGFV Q V G
Sbjct: 197 VTMKTTLGTLKIKMEPDWAPNHVRNFLKLAETGWLNGTSFHRIVKGFVVQGGMENSRVNG 256
Query: 88 RSAPMNEVQRVEAEKTVVGEF-SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ P + R + GEF DV+HVRGI+SM R DPNSA +SF ++L APHLDGQ
Sbjct: 257 AAHPADRWVR-----PLNGEFRKDVQHVRGIVSMARSDDPNSATTSFFLMLAPAPHLDGQ 311
Query: 147 YAVFGKVTKGDETLRKLE 164
Y+ FG++ +G E L E
Sbjct: 312 YSAFGRIVEGMEVLDLFE 329
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 10/176 (5%)
Query: 5 IRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
+R L+ + A S D V T+ G F F AP+ V H +L R G
Sbjct: 1 MRFLPLLLCSVAFAQSPAD-----LEAVVTTDLGVFRFEFAADKAPKHVQHFIQLAREGF 55
Query: 65 YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYS 124
Y+ + F RV + Q D + ++ + GEFSD+KH RG++S S
Sbjct: 56 YDGSAFHRVVAYGIIQGGDPLLKEPKTPRKLWGTGGLNQLAGEFSDMKHERGVVST--VS 113
Query: 125 DPN---SAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177
PN S S F I + P LDG+++ FG+V++G + + K+ P +G+ P
Sbjct: 114 IPNKLDSDGSQFFICISPQPPLDGKFSAFGRVSEGMDVVEKISQSPNNADGMVEKP 169
>gi|50541748|gb|AAT78352.1| peptidyl-prolyl cis-trans isomerase [Brachyspira hyodysenteriae]
Length = 177
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 12 ITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFF 71
+ + GT + P+ + +TN+G IE F+P AP+ V+ I KL G YN F
Sbjct: 1 MIIFGTVLIAQKPKASKEHLFIETNFGTIEIAFFPEKAPKHVEAIKKLANEGFYNGTLFH 60
Query: 72 RVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV-GEFSDVKHVRGILSMGRYSDPNSAA 130
RV GF+ Q D + + P + V+ EF+DV H RGI SM R + NSA
Sbjct: 61 RVIPGFMIQGGDPLSKQ--PNRSLHGTGGPNFVIPAEFNDVSHKRGICSMARGASINSAG 118
Query: 131 SSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGL 166
S F I + D+P LDGQY V+G+V G + K+ L
Sbjct: 119 SQFFICVADSPFLDGQYTVWGEVVSGMDVADKIVAL 154
>gi|429124123|ref|ZP_19184655.1| peptidyl-prolyl cis-trans isomerase A [Brachyspira hampsonii 30446]
gi|426279853|gb|EKV56872.1| peptidyl-prolyl cis-trans isomerase A [Brachyspira hampsonii 30446]
Length = 163
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+ +T+YG IE FYP +AP+ V+ I KL G Y+ F RV F+ Q D V +
Sbjct: 4 HLFIETDYGTIEIEFYPEIAPKHVEAIKKLANEGFYDGIRFHRVIPNFMIQGGDPVSKDA 63
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
A + EFSD H RGI SM R DP+SA S F I + D+PHLDGQY V
Sbjct: 64 AKRYLHGTGGPGFNIPAEFSDKPHKRGICSMARSQDPDSAGSQFFICVADSPHLDGQYTV 123
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTE 192
+G V G + K+ L K P E T++ Y + E
Sbjct: 124 WGNVVNGMDVADKIVAL---KRDHNDNPMENSTMNKVYIKEVE 163
>gi|296127233|ref|YP_003634485.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brachyspira
murdochii DSM 12563]
gi|296019049|gb|ADG72286.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brachyspira
murdochii DSM 12563]
Length = 191
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
L +I I L + + G + P+ + +T++G IE F+P AP+ V+ I KL
Sbjct: 5 LKIILISLVCVAVFGAVLIAQKPKTSKEHLFIETDFGTIEIAFFPDKAPKHVEAIKKLAN 64
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV-GEFSDVKHVRGILSM 120
G YN F RV GF+ Q D + + P + V+ EF+DV H RGI SM
Sbjct: 65 EGFYNGTLFHRVIPGFMIQGGDPLSKQ--PNRALHGTGGPNFVIPAEFNDVSHRRGICSM 122
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGL 166
R NSA S F I + D+ LDGQY V+G+V G + K+ L
Sbjct: 123 ARSQSINSAGSQFFICVADSTFLDGQYTVWGEVVSGMDVADKIAAL 168
>gi|374604698|ref|ZP_09677652.1| peptidyl-prolyl cis-trans isomerase [Paenibacillus dendritiformis
C454]
gi|374389721|gb|EHQ61089.1| peptidyl-prolyl cis-trans isomerase [Paenibacillus dendritiformis
C454]
Length = 213
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
IE YP AP TV++ LV G Y+ F RV GF+ Q D G G P +
Sbjct: 51 IEVELYPDTAPNTVNNFISLVNKGFYDGLIFHRVIPGFMIQGGDPQGTGIGGPG---YSI 107
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E + G +D+KH G++SM R DP+SA S F I+ DAPHLDGQYA FGKVT G E
Sbjct: 108 KGEFSSNGITNDLKHTEGVISMARSMDPDSAGSQFFIMDADAPHLDGQYAAFGKVTSGIE 167
Query: 159 TLRKL 163
T+ ++
Sbjct: 168 TVHEI 172
>gi|374307590|ref|YP_005054021.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Filifactor
alocis ATCC 35896]
gi|320120336|gb|EFE28444.2| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Filifactor
alocis ATCC 35896]
Length = 172
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G+I+ YP +AP TV++ L++ G Y+ F R+ +GF+ Q D G G P
Sbjct: 12 NKGNIKIELYPEIAPNTVNNFISLIKKGYYDGLIFHRIIRGFMIQGGDPRGTGMGGPGYS 71
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E + G +D+KH G+LSM R DPNSA S F ++ +PHLDGQYA FGKV
Sbjct: 72 IR---GEFSANGFTNDLKHTEGVLSMARTMDPNSAGSQFFLMTSVSPHLDGQYAAFGKVI 128
Query: 155 KGDETLRKLEGLPT 168
+G + LE + T
Sbjct: 129 EGLNLIMDLEKVKT 142
>gi|302036172|ref|YP_003796494.1| peptidylprolyl isomerase [Candidatus Nitrospira defluvii]
gi|300604236|emb|CBK40568.1| Peptidylprolyl isomerase [Candidatus Nitrospira defluvii]
Length = 217
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 9 LTLITLIGTAS--SQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYN 66
+T I L A+ E +AR V +T +GDIE F P VAP+ V++ KL + G YN
Sbjct: 25 MTGIGLAADAAPAGSESVSASNARAVIKTKFGDIEIKFLPDVAPKHVENFIKLAKSGFYN 84
Query: 67 TNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDP 126
F RV GF+ Q D S + V EFSD+ H RG++SM R DP
Sbjct: 85 GTIFHRVIPGFMIQGGDPNTKDSLKKGAYGQGGPGHNVKAEFSDLPHKRGMVSMARAQDP 144
Query: 127 NSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLP 167
+SA S F +++ ++ LD +Y +FG+V KG K+ LP
Sbjct: 145 DSAGSQFFVVVEESRFLDRKYTIFGEVVKGIGVADKIVALP 185
>gi|363897098|ref|ZP_09323638.1| hypothetical protein HMPREF9624_00200 [Oribacterium sp. ACB7]
gi|361959196|gb|EHL12489.1| hypothetical protein HMPREF9624_00200 [Oribacterium sp. ACB7]
Length = 161
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I YP +AP TV++ LV+ G YN F R+ GF+ Q D G G P ++
Sbjct: 16 IRLELYPEIAPVTVENFLDLVKKGFYNGLTFHRIIPGFMIQGGDPSGNGTGGPG---YKI 72
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E G +D+KH RG++SM R DPNSA S F I+ DAPHLDG+YA FGKV +G +
Sbjct: 73 KGEFRSNGVKNDLKHERGVISMARAFDPNSAGSQFFIMHEDAPHLDGEYAAFGKVIEGLD 132
Query: 159 TLRKLEGLPT 168
T+ ++ + T
Sbjct: 133 TVDEIASVET 142
>gi|291459550|ref|ZP_06598940.1| peptidyl-prolyl cis-trans isomerase A [Oribacterium sp. oral taxon
078 str. F0262]
gi|291417828|gb|EFE91547.1| peptidyl-prolyl cis-trans isomerase A [Oribacterium sp. oral taxon
078 str. F0262]
Length = 165
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I YP AP TV++ KLV+ G Y+ F R+ GF+ Q D G G P +
Sbjct: 16 IRLELYPDKAPITVENFLKLVKSGFYDGLCFHRIIPGFMIQGGDPKGNGCGGPG---WSI 72
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E G +D+KHVRG++SM R DPNSA S F I+ DAPHLDG+YA FG V +G +
Sbjct: 73 KGEFRSNGVPNDLKHVRGVISMARAMDPNSAGSQFFIMHADAPHLDGEYAAFGSVIEGMD 132
Query: 159 TLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTE 192
+ ++ PT G P E + + +TE
Sbjct: 133 EVDRIANTPT---GFQDAPMEDVIMKKLSLEETE 163
>gi|445062374|ref|ZP_21374768.1| peptidyl-prolyl cis-trans isomerase A [Brachyspira hampsonii 30599]
gi|444506242|gb|ELV06610.1| peptidyl-prolyl cis-trans isomerase A [Brachyspira hampsonii 30599]
Length = 163
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+ +T+YG IE FYP +AP+ V+ I KL G Y+ F RV F+ Q D V +
Sbjct: 4 HLFIETDYGTIEIEFYPEIAPKHVEAIKKLANEGFYDGIRFHRVIPNFMIQGGDPVSKDA 63
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
A + EFS+ H RGI SM R DP+SA S F I + D+PHLDGQY V
Sbjct: 64 AKRYLHGTGGPGFNIPAEFSNKPHKRGICSMARSQDPDSAGSQFFICVADSPHLDGQYTV 123
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTE 192
+G V G + + K+ L K P E T++ Y + E
Sbjct: 124 WGNVVDGMDAVDKIVAL---KRDHNDNPMENSTMNKVYIKEVE 163
>gi|334133434|ref|ZP_08506986.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Paenibacillus sp. HGF7]
gi|333608991|gb|EGL20271.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Paenibacillus sp. HGF7]
Length = 232
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
Query: 13 TLIGTASSQEDPQLGSAR--VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNH 69
T G+A E P+ V + + G I + YP VAP TV++ L++ G Y+
Sbjct: 45 TAAGSAGGSEPPKTDGKNPVVTIEMDNGKIIKAELYPEVAPNTVNNFISLIKKGFYDGKI 104
Query: 70 FFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSA 129
F RV GF+ Q D + ++ E T G +++KH RG+LSM R DP+SA
Sbjct: 105 FHRVIPGFMIQGGDP--DGTGAGGPGYGIKGEFTSNGFKNELKHTRGVLSMARAQDPDSA 162
Query: 130 ASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTR 169
S F I++ D+ HLDGQYA FGKVT+G E + ++ PT
Sbjct: 163 GSQFFIMVADSTHLDGQYASFGKVTEGMEAVDEIVNQPTE 202
>gi|427428081|ref|ZP_18918123.1| Peptidyl-prolyl cis-trans isomerase [Caenispirillum salinarum AK4]
gi|425882782|gb|EKV31461.1| Peptidyl-prolyl cis-trans isomerase [Caenispirillum salinarum AK4]
Length = 182
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFG-----FYPSVAPQTVDH 55
MLN I L + LI TAS Q SA T Y D+E G P +AP+ V
Sbjct: 1 MLNRILSALIGVFLIMTAS-----QTASAADPENTLYMDLEHGRVVIEMRPDLAPKHVAR 55
Query: 56 IFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVR 115
I +LVR G Y+ F RV GF+AQ D + + + EFS+ +HVR
Sbjct: 56 IKELVREGFYDGTPFHRVIPGFMAQGGDPT--------GTGTGGSGQNLPAEFSNERHVR 107
Query: 116 GILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
G +SM R ++PNSA S F I+ DAPHLDGQY ++GKV +G + + +++
Sbjct: 108 GTVSMARAANPNSADSQFFIVFEDAPHLDGQYTIWGKVVEGMDAVDQIK 156
>gi|420154897|ref|ZP_14661770.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
sp. MSTE9]
gi|394760033|gb|EJF42669.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
sp. MSTE9]
Length = 172
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP VAP TV + LV+ G Y+ F RV GFV Q D G G P ++ E
Sbjct: 18 LYPEVAPNTVRNFLSLVKKGFYDGTIFHRVIPGFVIQGGDPEGTGMGGPDYHIR---GEF 74
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
G +D+KH +G++SM R S P+SA S F ++ GDAP+LDG YA FGK+ +G E + +
Sbjct: 75 AKNGSKNDLKHTKGVISMARASHPDSAGSQFFLMAGDAPYLDGNYAAFGKIIEGLEEVDR 134
Query: 163 LEGLP 167
+ G P
Sbjct: 135 IVGAP 139
>gi|421860722|ref|ZP_16292827.1| peptidyl-prolyl cis-trans isomerase [Paenibacillus popilliae ATCC
14706]
gi|410829670|dbj|GAC43264.1| peptidyl-prolyl cis-trans isomerase [Paenibacillus popilliae ATCC
14706]
Length = 217
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
+E YP AP TV++ LV G Y+ F RV GF+ Q D G G P +
Sbjct: 55 MEVELYPDTAPNTVNNFISLVNKGFYDGLIFHRVIPGFMIQGGDPQGTGVGGPG---YCI 111
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E + G +D+KH G++SM R +DP+SA S F I+ DAPHLDGQYA FGKVT G E
Sbjct: 112 KGEFSANGVTNDLKHAEGVISMARSTDPDSAGSQFFIMDADAPHLDGQYAAFGKVTSGIE 171
Query: 159 TLRKL 163
+ ++
Sbjct: 172 MVHEI 176
>gi|451942141|ref|YP_007462778.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin type [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451901528|gb|AGF75990.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin type [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 172
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + G + +AP V I +LVR G Y+ F RV +GF+AQ DV G ++
Sbjct: 11 LILETTKGRVVIGLFADLAPFHVARIKELVREGAYDNVIFHRVIEGFMAQTGDVQFGKKN 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ R A+ + EFS++ H RGI+SM R +PNSA S F I DAP LD
Sbjct: 71 GAEFNLSRAGMGGSAKPNLTAEFSNLSHKRGIVSMARSQNPNSANSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGQVVEGMENVDKIK 149
>gi|354583668|ref|ZP_09002566.1| Peptidylprolyl isomerase [Paenibacillus lactis 154]
gi|353197548|gb|EHB63029.1| Peptidylprolyl isomerase [Paenibacillus lactis 154]
Length = 259
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 81/150 (54%), Gaps = 5/150 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G I+ YP VAP TV++ L++ G Y+ F RV GF+ Q D G G P
Sbjct: 101 GVIKAELYPEVAPNTVNNFISLIKQGFYDGTGFHRVIPGFMIQGGDPDGNGTGGPG---Y 157
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ E T G +D+KH G+LSM R DPNSA S F I++ DAPHLD YA FGKV +G
Sbjct: 158 SIPGEFTANGFQNDLKHTTGVLSMARGEDPNSAGSQFFIMVADAPHLDQLYASFGKVIEG 217
Query: 157 DETLRKLEGLPTRKEGIFVMP-TERITIHS 185
+ + + T E MP +++T+ +
Sbjct: 218 MDVAMGIVNVETNGETPVKMPIMKKVTVDT 247
>gi|395793308|ref|ZP_10472713.1| hypothetical protein MEI_01334 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|423713079|ref|ZP_17687339.1| hypothetical protein ME1_00085 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395424705|gb|EJF90885.1| hypothetical protein ME1_00085 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395431622|gb|EJF97640.1| hypothetical protein MEI_01334 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 172
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + G + +AP V I +LVR G Y+ F RV +GF+AQ DV G +
Sbjct: 11 LILETTKGRVVIGLFADLAPCHVARIKELVREGAYDNVIFHRVIEGFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
A + R A+ + EFS++ H RG +SM R +PNSA S F I DAP LD
Sbjct: 71 AAEFNLSRAGMGGSAKPDLTAEFSNLSHKRGTVSMARSQNPNSANSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTRKEGIFVMPT 178
QY+++G+V +G E + K++ G P + + + T
Sbjct: 131 QYSIWGQVVEGMENVDKIKRGEPVIEPDVIIKAT 164
>gi|225155849|ref|ZP_03724335.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Diplosphaera
colitermitum TAV2]
gi|224803399|gb|EEG21636.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Diplosphaera
colitermitum TAV2]
Length = 169
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 7/141 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA---DVVGG 87
V T+ GDI F+P VAP+TV++ KL R G Y+ F R+ KGF+ Q G
Sbjct: 10 AVISTSSGDITIVFWPDVAPKTVENFKKLAREGFYDGTAFHRIIKGFMIQGGCPNTKAGA 69
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
R P + + EF+ HVRG++SM R P+SA S F I GDA LD QY
Sbjct: 70 RGMPGTG----DPGYKIKAEFNTKSHVRGVISMARSQHPDSAGSQFFICHGDAKFLDRQY 125
Query: 148 AVFGKVTKGDETLRKLEGLPT 168
FG++ GD+ L + +PT
Sbjct: 126 TAFGELIAGDDVLESIASVPT 146
>gi|384209559|ref|YP_005595279.1| peptidyl-prolyl cis-trans isomerase A [Brachyspira intermedia
PWS/A]
gi|343387209|gb|AEM22699.1| peptidyl-prolyl cis-trans isomerase A [Brachyspira intermedia
PWS/A]
Length = 163
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+ +T+YG IE FYP +AP+ V+ I KL G Y+ F RV F+ Q D V +
Sbjct: 4 HLFIETDYGTIEIEFYPEIAPKHVEAIKKLANEGFYDGIRFHRVIPRFMIQGGDPVSKDA 63
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ + EFSD H RGI SM R P+SA S F I + DAPHLDGQY V
Sbjct: 64 TKRHLHGTGGPGFNIPAEFSDKPHKRGICSMARSQHPDSAGSQFFICVADAPHLDGQYTV 123
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTE 192
+G V G + K+ L K P E T++ Y + E
Sbjct: 124 WGNVVNGMDVADKIVAL---KRDHNDNPMENSTMNKVYVKEVE 163
>gi|407463394|ref|YP_006774711.1| peptidyl-prolyl isomerase [Candidatus Nitrosopumilus koreensis AR1]
gi|407047016|gb|AFS81769.1| peptidyl-prolyl isomerase [Candidatus Nitrosopumilus koreensis AR1]
Length = 497
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 7/182 (3%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
Q+ V+ +TN G I GF+P+ AP+ V++ KL G Y+ F R+ GF+ Q D
Sbjct: 18 QIMDPVVIIETNLGKIVIGFFPNDAPKHVENFLKLSTSGFYDGTLFHRIIPGFMIQGGDP 77
Query: 85 VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
P N EK + EF+ +KH RGI+SM R +DPNS S F I+ D+ LD
Sbjct: 78 NTIDGDP-NTWGTGGPEKRLDAEFNTIKHNRGIVSMARSADPNSGGSQFFIVHQDSNFLD 136
Query: 145 GQYAVFGKVTKGD--ETLRKLEGLPTRKEGIFVMPTE----RITIHSSYYYDTEMEICEK 198
QY VFG++ + ETL K+ + T ++ V P + ++T+ S +E+ E
Sbjct: 137 EQYTVFGRIVTEESFETLDKIAAVETNEKDAPVDPEQVRITKVTVVSRSEIPDLIELTEP 196
Query: 199 ER 200
+R
Sbjct: 197 DR 198
>gi|291521560|emb|CBK79853.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Coprococcus catus GD/7]
Length = 172
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ LV+ G Y+ F RV GF+ Q D G G P ++ E
Sbjct: 20 LYPEIAPNTVNNFISLVQKGFYDGLIFHRVISGFMIQGGDPQGTGMGGPG---YSIKGEF 76
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
+ G +D+KH RG+LSM R PNSA S F I+ +APHLDGQYA FGKV +G + + K
Sbjct: 77 AMNGVRNDLKHTRGVLSMARSMMPNSAGSQFFIMHANAPHLDGQYAAFGKVVEGLDVVDK 136
Query: 163 LEGLPT 168
+ + T
Sbjct: 137 IASVRT 142
>gi|225619980|ref|YP_002721237.1| peptidyl-prolyl cis-trans isomerase A [Brachyspira hyodysenteriae
WA1]
gi|50541749|gb|AAT78353.1| peptidyl-prolyl cis-trans isomerase [Brachyspira hyodysenteriae]
gi|225214799|gb|ACN83533.1| peptidyl-prolyl cis-trans isomerase A [Brachyspira hyodysenteriae
WA1]
Length = 163
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+ +T+YG IE FYP +AP+ V+ I KL G Y+ F RV F+ Q D V +
Sbjct: 4 HLFIETDYGTIEIEFYPEIAPKHVEAIKKLANEGFYDGIRFHRVIPRFMIQGGDPVSKDA 63
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ + EFSD H RGI SM R P+SA S F I + DAPHLDGQY V
Sbjct: 64 TKRHLHGTGGPGFNIPAEFSDKPHKRGICSMARSQHPDSAGSQFFICVADAPHLDGQYTV 123
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTE 192
+G V G + K+ L K P E T++ Y + E
Sbjct: 124 WGNVVDGMDVADKIVSL---KRDHNDNPMENSTMNKVYVKEVE 163
>gi|251794160|ref|YP_003008891.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Paenibacillus
sp. JDR-2]
gi|247541786|gb|ACS98804.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Paenibacillus
sp. JDR-2]
Length = 241
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 90/194 (46%), Gaps = 18/194 (9%)
Query: 17 TASSQEDPQLGSAR----VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFR 72
T Q D LGS + V N + YP +AP TV++ LV+ G Y+ F R
Sbjct: 53 TQPPQPDKLLGSDKHPVVTVEMDNGKSFKVELYPEIAPNTVNNFVSLVKKGFYDGTIFHR 112
Query: 73 VDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEF------SDVKHVRGILSMGRYSDP 126
V GF+ Q D + GEF +D+ H RG++SM R DP
Sbjct: 113 VIPGFMIQGGDP--------EGTGMGGPGYGIKGEFMSNGFQNDLLHTRGVISMARSGDP 164
Query: 127 NSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSS 186
+SA S F +++ DAP LDG YA FGKV++G +T+ ++ T K G P + + I +
Sbjct: 165 DSAGSQFFVMVADAPSLDGDYAAFGKVSEGMDTVDEIVNQATEKTGEGSRPVKPMAIKKA 224
Query: 187 YYYDTEMEICEKER 200
M E E+
Sbjct: 225 TVDTKGMTFAEPEK 238
>gi|399888082|ref|ZP_10773959.1| peptidyl-prolyl isomerase [Clostridium arbusti SL206]
Length = 171
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
V + + GDI + YP +AP TV + L+ G YN F R+ GFV Q G +
Sbjct: 5 VTIKISNGDIMKAELYPDLAPNTVKNFISLINRGFYNGLIFHRIIPGFVIQGGCPNGTGT 64
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
N ++ E + G +D+KH G+LSM R P+SA S F I++GD+PHLD QYA
Sbjct: 65 G--NPGYSIKGEFEINGFKNDIKHTEGVLSMARAMSPDSAGSQFFIMVGDSPHLDRQYAA 122
Query: 150 FGKVTKGDETLRKL 163
FGK+T+G E +K+
Sbjct: 123 FGKITEGLEIAKKM 136
>gi|330814111|ref|YP_004358350.1| peptidyl-prolyl cis-trans isomerase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487206|gb|AEA81611.1| peptidyl-prolyl cis-trans isomerase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 187
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 87/166 (52%), Gaps = 13/166 (7%)
Query: 4 VIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLG 63
V+ + L L T+ G A E+P +++ T YGD++ + +AP V+ + +L + G
Sbjct: 9 VVLLILFLSTIKGEAV--ENP-----KIILTTKYGDVKIELFKDIAPNHVERVLELSKAG 61
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRS-----APMNEVQRVEAEKTVVGEFSDVKHVRGIL 118
Y+ F RV GF+AQ D+ G + A M + + EF++ H RG L
Sbjct: 62 KYDGVAFHRVIDGFMAQTGDIQHGNTKKGFNAAMAGTGGSDLPD-LTQEFNNTAHERGTL 120
Query: 119 SMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
SM R DPNSA S F I +A HLD QY FGKV +G E + KL+
Sbjct: 121 SMARSQDPNSANSQFFICFQNASHLDRQYTAFGKVLEGMEFIDKLK 166
>gi|393794906|ref|ZP_10378270.1| peptidyl-prolyl isomerase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 151
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ +TN G I F P +AP+TV + KL + G YN F RV GF+ Q D ++A
Sbjct: 4 AIIETNLGTIVFKLLPDLAPETVRNFEKLAKDGFYNGTLFHRVIPGFMIQGGDP-NTKTA 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ T+ EFS H RGI+SM R DPNSA S F I+ D+ LD QY VF
Sbjct: 63 NKSTWGMGGPGHTIKAEFSSRSHHRGIVSMARAQDPNSAGSQFFIVTTDSTFLDRQYTVF 122
Query: 151 GKVTKGDETLRKLEGLPTRKEGIFVM 176
G+VT+G + K+ LP + +M
Sbjct: 123 GEVTEGMDVADKIVNLPRDRNDCLLM 148
>gi|320528539|ref|ZP_08029696.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Solobacterium moorei F0204]
gi|320131125|gb|EFW23698.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Solobacterium moorei F0204]
Length = 156
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 47 SVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVG 106
+ AP+TV + KLV G Y+ F R+ GF+ Q D +G + +++ +VG
Sbjct: 19 TAAPKTVANFNKLVSEGFYDGLSFHRIIPGFMIQGGDPIGNGTG--------GSKENIVG 70
Query: 107 EFSD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETL 160
EF+ +KHVRG++SM R DPNSA+S F I+ DAPHLDG YA FG V +G E +
Sbjct: 71 EFASNGFNNPIKHVRGVISMARAMDPNSASSQFFIMHADAPHLDGNYAAFGHVVEGLEVV 130
Query: 161 RKLEGLPT 168
++ PT
Sbjct: 131 DEIANTPT 138
>gi|167772395|ref|ZP_02444448.1| hypothetical protein ANACOL_03772 [Anaerotruncus colihominis DSM
17241]
gi|167665498|gb|EDS09628.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Anaerotruncus colihominis DSM 17241]
Length = 158
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 16/140 (11%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N +I+ YP +AP TV++ LV+ G Y+ F RV GF+ Q G G P +
Sbjct: 8 NGKEIKIELYPQIAPITVENFISLVKDGFYDGLTFHRVIPGFMIQGGCPDGTGMGGPGH- 66
Query: 95 VQRVEAEKTVVGEF------SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
T+ GEF + ++H RG+LSM R ++P+SA S F I+ DAPHLDGQYA
Sbjct: 67 --------TIKGEFLSNGVENTLRHTRGVLSMARANNPDSAGSQFFIMHADAPHLDGQYA 118
Query: 149 VFGKVTKGDETLRKLEGLPT 168
FGKV +G E + ++ +PT
Sbjct: 119 AFGKVVEGMEAVDEIAAVPT 138
>gi|253681167|ref|ZP_04861970.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum D str.
1873]
gi|416349814|ref|ZP_11680667.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum C str.
Stockholm]
gi|253563016|gb|EES92462.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum D str.
1873]
gi|338196491|gb|EGO88682.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum C str.
Stockholm]
Length = 172
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP +AP TV++ L+ G Y+ F RV GF+ Q D G G
Sbjct: 5 VTIKMQNGDIMKAELYPEIAPNTVNNFISLINKGFYDGVIFHRVIPGFMIQGGDPDGTGM 64
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E T G +D+KH RG+LSM R P+SA S F I++ DAPHLD QYA
Sbjct: 65 GGPG---YSIKGEFTSNGFKNDLKHTRGVLSMARAMSPDSAGSQFFIMVADAPHLDNQYA 121
Query: 149 VFGKVTKGDETLRKL 163
FGKV +G E K+
Sbjct: 122 SFGKVIEGMEVADKI 136
>gi|160932315|ref|ZP_02079706.1| hypothetical protein CLOLEP_01150 [Clostridium leptum DSM 753]
gi|156868917|gb|EDO62289.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
leptum DSM 753]
Length = 173
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G ++ YP AP TV + LV G YN F RV GF+ Q D G G P
Sbjct: 13 NGGVMKVELYPETAPNTVANFISLVEKGFYNGTIFHRVIPGFMIQGGDPEGTGMGGPG-- 70
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
R++ E T +D+KH +G++SM R P+SA S F I++ DAPHLDGQYA FGKV
Sbjct: 71 -YRIKGEFTANRFQNDLKHTKGVISMARSGHPDSAGSQFFIMVDDAPHLDGQYASFGKVI 129
Query: 155 KGDETLRKL 163
+G E ++
Sbjct: 130 EGIEVADQI 138
>gi|288554788|ref|YP_003426723.1| peptidyl-prolyl cis-trans isomerase [Bacillus pseudofirmus OF4]
gi|288545948|gb|ADC49831.1| peptidyl-prolyl cis-trans isomerase [Bacillus pseudofirmus OF4]
Length = 206
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G++ YP VAPQTV++ LV G Y+ F RV GF+ Q D G G P +
Sbjct: 55 GEVVIELYPEVAPQTVENFVSLVEDGFYDGLTFHRVIPGFMIQGGDPDGNGTGGPGH--- 111
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+E E + G +++KH RG++SM R DPNSA S F I++ D P LDG+YA FGKV +G
Sbjct: 112 SIEGEFSSNGFENNLKHERGVISMARSQDPNSAGSQFFIMVADTPSLDGEYASFGKVLEG 171
>gi|408403217|ref|YP_006861200.1| dolichyl-diphosphooligosaccharide--protein glycotransferase
[Candidatus Nitrososphaera gargensis Ga9.2]
gi|408363813|gb|AFU57543.1| dolichyl-diphosphooligosaccharide--protein glycotransferase
[Candidatus Nitrososphaera gargensis Ga9.2]
Length = 923
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 32 VFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRSA 90
+ T G IE F+P AP+ VD+ KL G Y+ F R+ GFV Q D G +
Sbjct: 757 IINTTQGPIEIEFFPKEAPKHVDNFIKLANEGFYDGTLFHRIVPGFVIQGGDPNTKGDDS 816
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH---LDGQY 147
+ + TV EF+D+ H RGI+SM R DPNSA S F I+L D + LDG+Y
Sbjct: 817 DRSTWGQGGPGYTVNAEFNDIPHTRGIVSMARAQDPNSAGSQFFIVLDDNENTRALDGKY 876
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEG 172
VFGKV G + + K+ L T G
Sbjct: 877 TVFGKVISGMDVVDKIAALQTTMVG 901
>gi|162447660|ref|YP_001620792.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Acholeplasma
laidlawii PG-8A]
gi|161985767|gb|ABX81416.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Acholeplasma
laidlawii PG-8A]
Length = 168
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Query: 37 YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQ 96
+G ++ YP++AP TV + V Y+ F R+ KGF+ Q G + P
Sbjct: 13 FGTLKVELYPNIAPNTVSNFMNYVNKNFYDGLIFHRIIKGFMIQ------GGANPKAREM 66
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
++ E G +D+KH RG+LSM R D NSA S F I+ D+PHLDGQYA FGKV +G
Sbjct: 67 PIKGEFASNGFKNDLKHARGVLSMARTMDKNSATSQFFIMHQDSPHLDGQYASFGKVIEG 126
Query: 157 DETLRKLEGLPT 168
E + K+ + T
Sbjct: 127 IEIVDKIASVKT 138
>gi|300855465|ref|YP_003780449.1| peptidyl-prolyl cis-trans isomerase [Clostridium ljungdahlii DSM
13528]
gi|300435580|gb|ADK15347.1| peptidyl-prolyl cis-trans isomerase [Clostridium ljungdahlii DSM
13528]
Length = 174
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 72/131 (54%), Gaps = 16/131 (12%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
IE YP AP TV++ LV+ G YN F R+ GF+ Q D G G P ++
Sbjct: 16 IEIELYPDTAPNTVNNFISLVKKGFYNGTIFHRIIPGFMIQGGDPEGTGMGGPGYSIK-- 73
Query: 99 EAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
GEFS ++KH +G++SM R PNSA S F I+ +APHLDGQYA FGK
Sbjct: 74 -------GEFSANNFENNLKHEKGVISMARTMAPNSAGSQFFIMTDNAPHLDGQYAAFGK 126
Query: 153 VTKGDETLRKL 163
V +G E + ++
Sbjct: 127 VVEGIEAVDEI 137
>gi|325679352|ref|ZP_08158937.1| peptidyl-prolyl cis-trans isomerase B [Ruminococcus albus 8]
gi|324108949|gb|EGC03180.1| peptidyl-prolyl cis-trans isomerase B [Ruminococcus albus 8]
Length = 157
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N +I YP VAP TV + KLV G Y+ F RV KGF+ Q D G E
Sbjct: 8 NGKEILIELYPDVAPITVANFEKLVGQGFYDGLIFHRVIKGFMIQGGDPEGTGMGGAKE- 66
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+++ E G +D+KH RG++SM R PNSA+S F I+ DAPHLDG YA FGKV K
Sbjct: 67 -KIKGEFRSNGVANDLKHTRGVISMARSMMPNSASSQFFIMHEDAPHLDGDYAAFGKVVK 125
Query: 156 GDETLRKL 163
G E + ++
Sbjct: 126 GIEVVDEI 133
>gi|291542936|emb|CBL16046.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Ruminococcus bromii L2-63]
Length = 223
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 14/134 (10%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG IE Y +AP TV + L + G Y+ F R+ GF+ Q D +G +
Sbjct: 69 DYGKIEVELYEELAPITVKNFVDLAKDGFYDGLTFHRIITGFMIQGGDPLGNGTGG---- 124
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+EKT+ GEF+ ++ H RG++SM R ++P+SA+S F I+ D+ +LDGQYA
Sbjct: 125 ----SEKTIKGEFAQNGVENNLSHTRGVISMARSNEPDSASSQFFIVQADSTYLDGQYAA 180
Query: 150 FGKVTKGDETLRKL 163
FGKVTKG + + K+
Sbjct: 181 FGKVTKGMDIVDKI 194
>gi|407774620|ref|ZP_11121918.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Thalassospira
profundimaris WP0211]
gi|407282662|gb|EKF08220.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Thalassospira
profundimaris WP0211]
Length = 167
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
L RVV Q P +AP+ V I +L R G Y+ F RV +GF+AQ D
Sbjct: 20 LKDGRVVIQ---------LRPDLAPKHVARIKELTREGFYDGLKFHRVIEGFMAQTGDPK 70
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G + Q+++AE FS+ +HVRG +SM R ++PNSA S F I+ DAPHLDG
Sbjct: 71 GNGTG--GSGQKLDAE------FSNERHVRGTVSMARSANPNSADSQFFIVFADAPHLDG 122
Query: 146 QYAVFGKVTKGDE 158
QY ++G+VT+G E
Sbjct: 123 QYTIWGEVTEGME 135
>gi|354557674|ref|ZP_08976932.1| Peptidylprolyl isomerase [Desulfitobacterium metallireducens DSM
15288]
gi|353550468|gb|EHC19905.1| Peptidylprolyl isomerase [Desulfitobacterium metallireducens DSM
15288]
Length = 168
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP +AP+TV + LV G Y+ F RV GF+ Q D G G P +
Sbjct: 23 IKIELYPEIAPETVKNFISLVSKGFYDGVIFHRVIPGFMIQGGDPSGNGTGGPG---YSI 79
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E T G +++KH RG++SM R ++PNSA S F +++ ++PHLDGQYA FGKV +G E
Sbjct: 80 KGEFTANGFENNLKHDRGVISMARTANPNSAGSQFFLMVANSPHLDGQYASFGKVIEGME 139
Query: 159 TLRKL 163
+ ++
Sbjct: 140 EVDRI 144
>gi|125972592|ref|YP_001036502.1| peptidylprolyl isomerase [Clostridium thermocellum ATCC 27405]
gi|256005154|ref|ZP_05430123.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
thermocellum DSM 2360]
gi|281416783|ref|ZP_06247803.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
thermocellum JW20]
gi|385779490|ref|YP_005688655.1| Peptidylprolyl isomerase [Clostridium thermocellum DSM 1313]
gi|419722555|ref|ZP_14249696.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
thermocellum AD2]
gi|419725632|ref|ZP_14252672.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
thermocellum YS]
gi|125712817|gb|ABN51309.1| Peptidylprolyl isomerase [Clostridium thermocellum ATCC 27405]
gi|255990901|gb|EEU01014.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
thermocellum DSM 2360]
gi|281408185|gb|EFB38443.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
thermocellum JW20]
gi|316941170|gb|ADU75204.1| Peptidylprolyl isomerase [Clostridium thermocellum DSM 1313]
gi|380771018|gb|EIC04898.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
thermocellum YS]
gi|380781432|gb|EIC11089.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
thermocellum AD2]
Length = 203
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 73/132 (55%), Gaps = 16/132 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP AP+TVD+ L G Y+ F R+ KGF+ Q D G + + KT
Sbjct: 52 LYPEYAPETVDNFITLAEEGFYDGLTFHRIIKGFMIQGGDPNGDGTG--------GSGKT 103
Query: 104 VVGEFSD-------VKHVRGILSMGRYS-DPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+ GEF++ + H RG++SM R S DPNSA S F I+ GDAP+LDG YA FGK+ +
Sbjct: 104 IKGEFANNGFTKNKLSHTRGVISMARKSNDPNSATSQFFIMHGDAPYLDGDYAAFGKLIE 163
Query: 156 GDETLRKLEGLP 167
G + L K+ P
Sbjct: 164 GYDVLDKIANTP 175
>gi|329766117|ref|ZP_08257676.1| peptidylprolyl isomerase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137388|gb|EGG41665.1| peptidylprolyl isomerase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 158
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ +TN G I F P +AP+TV + KL + G YN F RV GF+ Q D ++A
Sbjct: 4 AIIETNLGTIVFKLLPDLAPETVRNFEKLAKDGFYNGTLFHRVIPGFMIQGGDP-NTKTA 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ T+ EFS H RGI+SM R DPNSA S F I+ D+ LD QY VF
Sbjct: 63 NKSTWGMGGPGHTIKAEFSSRSHHRGIVSMARAQDPNSAGSQFFIVTTDSTFLDRQYTVF 122
Query: 151 GKVTKGDETLRKLEGLP 167
G+VT+G + K+ LP
Sbjct: 123 GEVTEGMDVADKIVNLP 139
>gi|154484012|ref|ZP_02026460.1| hypothetical protein EUBVEN_01720 [Eubacterium ventriosum ATCC
27560]
gi|149735054|gb|EDM50940.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Eubacterium
ventriosum ATCC 27560]
Length = 174
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + N GD+ + YP VAP TV++ LV G Y+ F RV +GF+ Q D G G
Sbjct: 8 VTIEMNNGDVMKAELYPEVAPNTVNNFISLVNRGYYDGIIFHRVIRGFMIQGGDPEGTGI 67
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E T G +D+KH G+LSM R PNSA S F I+ +PHLDGQYA
Sbjct: 68 GGPG---YSIKGEFTQNGFKNDLKHEPGVLSMARTMMPNSAGSQFFIMHQTSPHLDGQYA 124
Query: 149 VFGKVTKGDETLRKLEGLPTRK 170
FGKV +G E + K+ + T +
Sbjct: 125 AFGKVIEGIEVVNKIADVATDR 146
>gi|393797052|ref|ZP_10380416.1| peptidyl-prolyl isomerase, partial [Candidatus Nitrosoarchaeum
limnia BG20]
Length = 447
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
L +I + L LITL + +Q D +L V+ TN G I F+P+ AP+ V++ KL
Sbjct: 4 FLGIIFLTLFLITLGNQSFAQSDDKL----VILHTNLGKIVIEFFPNDAPKHVENFIKLA 59
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSM 120
G Y+ F R+ GF+ Q D +S +V EF+ +KH RGI+SM
Sbjct: 60 ESGFYDGTVFHRIIPGFMIQGGDP-NTKSGDPTTWGIGGPNYSVNAEFNTIKHNRGIVSM 118
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD--ETLRKLEGLPT 168
R +DPNSA S F I+ D+ LD QY VFG++ + +TL K+ + T
Sbjct: 119 ARSADPNSAGSQFFIVHKDSNFLDEQYTVFGRIVTQESFDTLDKIASVQT 168
>gi|169335768|ref|ZP_02862961.1| hypothetical protein ANASTE_02193 [Anaerofustis stercorihominis DSM
17244]
gi|169258506|gb|EDS72472.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Anaerofustis
stercorihominis DSM 17244]
Length = 163
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 77/147 (52%), Gaps = 17/147 (11%)
Query: 30 RVVFQTNYGDIEFG-FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-G 87
+V + GDI Y +AP T D+ KL + G YN F RV KGF+ Q G G
Sbjct: 6 KVKIEMEDGDIMLAELYEDIAPITCDNFIKLAKKGFYNGLIFHRVIKGFMIQGGCPDGNG 65
Query: 88 RSAPMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
P + T+ GEFS D+KH RG+LSM R D NSA S F I+ +AP
Sbjct: 66 MGGPGH---------TIKGEFSSNGIKNDLKHERGVLSMARSMDKNSAGSQFFIMHENAP 116
Query: 142 HLDGQYAVFGKVTKGDETLRKLEGLPT 168
HLDG YA FGK+ +G + L K+ PT
Sbjct: 117 HLDGDYAAFGKLIEGYDVLDKIAETPT 143
>gi|110633757|ref|YP_673965.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Chelativorans
sp. BNC1]
gi|110284741|gb|ABG62800.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Chelativorans sp. BNC1]
Length = 158
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 19/156 (12%)
Query: 19 SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFV 78
+ ++DP+ +V +T G++ +P VAP V I +L R G Y+ F RV GF+
Sbjct: 2 TKKKDPE---NTIVMETTKGNVVIELFPDVAPAHVARIKELAREGFYDGIVFHRVIDGFM 58
Query: 79 AQVADV----VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFS 134
AQ D +GG P + EFS+V HVRG SM R +PNSA S F
Sbjct: 59 AQTGDPTGTGMGGSDKP-----------DLKAEFSNVPHVRGTCSMARSQNPNSANSQFF 107
Query: 135 ILLGDAPHLDGQYAVFGKVTKGDETLRKLE-GLPTR 169
I G+AP L+ QY+V+G+V +G + + K++ G P R
Sbjct: 108 ICFGEAPWLNKQYSVWGQVVEGMDNIDKIKRGEPVR 143
>gi|296127234|ref|YP_003634486.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brachyspira
murdochii DSM 12563]
gi|296019050|gb|ADG72287.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brachyspira
murdochii DSM 12563]
Length = 162
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 71/137 (51%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+ +T+YG IE FY +AP+ V+ I KL G Y+ F RV F+ Q D V +
Sbjct: 3 HLFIETDYGTIEIEFYEKLAPKHVEAIKKLANEGFYDGIRFHRVIPNFMIQGGDPVSKDA 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
A + + EFSD H RGI SM R P+SA S F I + DAPHLDGQY V
Sbjct: 63 AKRHLHGTGGPGFNIPAEFSDKPHKRGICSMARSQHPDSAGSQFFICVADAPHLDGQYTV 122
Query: 150 FGKVTKGDETLRKLEGL 166
+G V G + K+ L
Sbjct: 123 WGNVVNGMDVADKIVSL 139
>gi|374581630|ref|ZP_09654724.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfosporosinus youngiae DSM 17734]
gi|374417712|gb|EHQ90147.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfosporosinus youngiae DSM 17734]
Length = 172
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N I+ YPS+AP+TV + LV G Y+ F R GF+ Q D G +
Sbjct: 23 NNQTIKIELYPSIAPETVQNFVSLVSQGFYDGLIFHRCIPGFMIQGGDPNG--TGMGGSK 80
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
Q + E T G +D+KH RG++SM R S PNSA+S F I++ A HLDGQYA FGKV +
Sbjct: 81 QTIRGEFTANGFKNDLKHDRGVISMARTSAPNSASSQFFIVVKAAGHLDGQYASFGKVLE 140
Query: 156 GDETLRKLEGLP 167
G E + ++ +P
Sbjct: 141 GMEEVDRIVSVP 152
>gi|317056889|ref|YP_004105356.1| peptidyl-prolyl isomerase [Ruminococcus albus 7]
gi|315449158|gb|ADU22722.1| Peptidylprolyl isomerase [Ruminococcus albus 7]
Length = 157
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N +I YP AP TV + KLV+ G Y+ F RV KGF+ Q D G +E
Sbjct: 8 NGKEILIELYPETAPITVANFEKLVKQGFYDGLIFHRVIKGFMIQGGDPEGTGMGGSDE- 66
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+++ E G +D++H RG++SM R PNSA+S F I+ DAPHLDG YA FGKV K
Sbjct: 67 -KIKGEFARNGVKNDLRHTRGVISMARSMMPNSASSQFFIMHQDAPHLDGDYAAFGKVVK 125
Query: 156 GDETLRKL 163
G E + ++
Sbjct: 126 GIEVVDEI 133
>gi|238917748|ref|YP_002931265.1| peptidylprolyl isomerase [Eubacterium eligens ATCC 27750]
gi|238873108|gb|ACR72818.1| peptidylprolyl isomerase [Eubacterium eligens ATCC 27750]
Length = 179
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F GD+ + YP +AP +V++ LV+ G Y+ F RV GF+ Q D G G
Sbjct: 13 VTFTMENGDVMKAELYPEIAPTSVNNFVNLVQKGFYDGLIFHRVIAGFMIQGGDPEGTGM 72
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E G +D+KH RG+LSM R P+SA S F I+ +APHLDG YA
Sbjct: 73 GGP---GYSIKGEFASNGFKNDLKHTRGVLSMARSMRPDSAGSQFFIMHQNAPHLDGDYA 129
Query: 149 VFGKVTKGDETLRKLEGLPT 168
FGK+ +G++ L K+ G+ T
Sbjct: 130 AFGKLIEGEDVLDKIAGVDT 149
>gi|363899454|ref|ZP_09325963.1| hypothetical protein HMPREF9625_00623 [Oribacterium sp. ACB1]
gi|395208492|ref|ZP_10397733.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oribacterium
sp. ACB8]
gi|361958494|gb|EHL11793.1| hypothetical protein HMPREF9625_00623 [Oribacterium sp. ACB1]
gi|394706073|gb|EJF13597.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oribacterium
sp. ACB8]
Length = 161
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I YP +AP TV++ LV G YN F R+ GF+ Q D G G P +
Sbjct: 16 IRLELYPEIAPITVENFLDLVNKGFYNGLTFHRIIPGFMIQGGDPSGNGTGGPG---YSI 72
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E G + +KH RG++SM R DPNSA S F I+ DAPHLDG+YA FGKV +G E
Sbjct: 73 KGEFKSNGVNNTMKHERGVISMARAFDPNSAGSQFFIMHKDAPHLDGEYAAFGKVIEGLE 132
Query: 159 TLRKLEGLPT 168
+ ++ + T
Sbjct: 133 AVDEIASVET 142
>gi|326791472|ref|YP_004309293.1| peptidyl-prolyl isomerase [Clostridium lentocellum DSM 5427]
gi|326542236|gb|ADZ84095.1| Peptidylprolyl isomerase [Clostridium lentocellum DSM 5427]
Length = 174
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAPMNEVQRVEA 100
YP VAP++V + LV G YN F R+ GF+ Q GG + R++
Sbjct: 22 LYPEVAPESVKNFISLVEKGFYNGLTFHRIIPGFMIQ-----GGCPEGTGTGGPGYRIKG 76
Query: 101 EKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETL 160
E G +D+KH RG+LSM R P+SA S F I+ DAPHLDGQYA FGKVT+G +T+
Sbjct: 77 EFAQNGVKNDLKHARGVLSMARSMMPDSAGSQFFIMHADAPHLDGQYAAFGKVTEGMDTV 136
Query: 161 RKLEGLPTRKEGIFVMPTERITI 183
+ + T V+P T+
Sbjct: 137 DYIANVGTDFSDRPVVPVRMKTV 159
>gi|218134895|ref|ZP_03463699.1| hypothetical protein BACPEC_02798 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990280|gb|EEC56291.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[[Bacteroides] pectinophilus ATCC 43243]
Length = 173
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 75/141 (53%), Gaps = 17/141 (12%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F GD+ + YP +AP TV++ L+ G Y+ F RV GF+ Q D G G
Sbjct: 7 VTFTMENGDVMKAELYPEIAPNTVNNFISLINKGFYDGLIFHRVISGFMIQGGDPEGMGY 66
Query: 89 SAPMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
P ++ GEFS D+KH G+LSM R P+SA S F I+ DAPH
Sbjct: 67 GGP---------GYSIAGEFSGNNFKNDLKHTAGVLSMARSQHPDSAGSQFFIMHKDAPH 117
Query: 143 LDGQYAVFGKVTKGDETLRKL 163
LDGQYA FGK+T+G + L +
Sbjct: 118 LDGQYAAFGKLTEGFDVLNSI 138
>gi|429767262|ref|ZP_19299470.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
celatum DSM 1785]
gi|429181317|gb|EKY22488.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
celatum DSM 1785]
Length = 218
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG--- 87
V+ +YG+I YP +AP TV++ +L G Y+ F RV KGF+ Q GG
Sbjct: 52 VIKVKDYGNITLELYPEIAPNTVNNFIELANSGYYDGLIFHRVIKGFMNQ-----GGCPN 106
Query: 88 RSAPMNEVQRVEAEKTVVG-EFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ +E E + G E +D+KH +G++SM R +DPNSA S F I+ A HLDGQ
Sbjct: 107 GTGTGGPGYSIEGEFSSNGYEGNDLKHTKGVISMARANDPNSAGSQFFIMADTASHLDGQ 166
Query: 147 YAVFGKVTKGDETLRKLEGLPT 168
YA FGK G + + ++ + T
Sbjct: 167 YAAFGKTIDGLDIVEEINSVKT 188
>gi|310640560|ref|YP_003945318.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Paenibacillus
polymyxa SC2]
gi|386039695|ref|YP_005958649.1| peptidyl-prolyl cis-trans isomerase [Paenibacillus polymyxa M1]
gi|309245510|gb|ADO55077.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Paenibacillus polymyxa SC2]
gi|343095733|emb|CCC83942.1| peptidyl-prolyl cis-trans isomerase [Paenibacillus polymyxa M1]
Length = 225
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV++ LV+ G YN F RV GF+ Q D G G P +
Sbjct: 68 IKLELYPEVAPNTVNNFISLVQKGAYNGTIFHRVIPGFMIQGGDPQGNGTGGPG---YSI 124
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ E G + +KH RG+LSM R +D +SA S F I++ DA +LDGQYA FGKVT G
Sbjct: 125 KGEFKSNGVNNTLKHTRGVLSMARSADLDSAGSQFFIMVADADYLDGQYAAFGKVTSG 182
>gi|402835494|ref|ZP_10884058.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Mogibacterium sp. CM50]
gi|402274045|gb|EJU23232.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Mogibacterium sp. CM50]
Length = 158
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
Y +AP++V++ +L G Y+ F RV GF+ Q G G P + E
Sbjct: 18 LYEDIAPKSVENFVELCEKGFYDGLIFHRVIPGFMIQGGCPDGTGMGGP---GYSIPGEF 74
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
T G +D+KH RG+LSM R DP+SA S F I++ D+PHLDGQYA FGKVT+G + +
Sbjct: 75 TANGFKNDLKHTRGVLSMARSMDPDSAGSQFFIMVADSPHLDGQYAAFGKVTEGMDEADR 134
Query: 163 LEGLP 167
+ G+P
Sbjct: 135 IVGVP 139
>gi|374995874|ref|YP_004971373.1| peptidyl-prolyl cis-trans isomerase [Desulfosporosinus orientis DSM
765]
gi|357214240|gb|AET68858.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfosporosinus orientis DSM 765]
Length = 169
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
Q+ ++ N I+ YP VAP+TV + KLV G Y+ F R F+ Q D
Sbjct: 9 QVNPIVIIEMENDNKIKIELYPDVAPETVQNFIKLVSEGFYDGLIFHRCIPSFMIQGGDP 68
Query: 85 VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
G + Q + E T G +D+KH RG++SM R S PNSA+S F I++ A HLD
Sbjct: 69 NG--TGMGGSKQTIRGEFTANGFKNDLKHDRGVISMARTSAPNSASSQFFIVVKAASHLD 126
Query: 145 GQYAVFGKVTKGDETLRKLEGLP 167
GQYA FGKV +G E + ++ P
Sbjct: 127 GQYASFGKVIEGMEEVDRIVNAP 149
>gi|308067805|ref|YP_003869410.1| peptidyl-prolyl cis-trans isomerase [Paenibacillus polymyxa E681]
gi|305857084|gb|ADM68872.1| Peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)
[Paenibacillus polymyxa E681]
Length = 225
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV++ LV+ G YN F RV GF+ Q D G G P +
Sbjct: 68 IKLELYPEVAPNTVNNFISLVQKGAYNGTIFHRVIPGFMIQGGDPQGNGTGGPG---YSI 124
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ E G + +KH RG+LSM R +D +SA S F I++ DA +LDGQYA FGKVT G
Sbjct: 125 KGEFKSNGVNNTLKHTRGVLSMARSADLDSAGSQFFIMVADADYLDGQYAAFGKVTSG 182
>gi|182419774|ref|ZP_02951014.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium butyricum 5521]
gi|237666953|ref|ZP_04526938.1| peptidyl-prolyl cis-trans isomerase CypE [Clostridium butyricum E4
str. BoNT E BL5262]
gi|182376322|gb|EDT73904.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium butyricum 5521]
gi|237658152|gb|EEP55707.1| peptidyl-prolyl cis-trans isomerase CypE [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 222
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 37 YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQ 96
+G I+ YP +AP TV++ L G Y+ F R+ K F+ Q D +
Sbjct: 63 FGTIKAELYPEIAPNTVNNFIYLANSGFYDNLTFHRIIKDFMIQGGDPN--GNGTGGPGY 120
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+E E T G + +KH G+LSM R DPNSA S F I+ A HLDG+YA FGKV G
Sbjct: 121 SIEGEFTSNGTANSLKHTEGVLSMARSQDPNSAGSQFFIMTKAASHLDGEYAAFGKVISG 180
Query: 157 DETLRKLEGLPTRKEGIFVMPTERITIHS 185
+ + ++E + T G P E + I S
Sbjct: 181 MDIVHEIENVKT---GSNDKPKEDVVIKS 206
>gi|374322507|ref|YP_005075636.1| peptidyl-prolyl cis-trans isomerase [Paenibacillus terrae HPL-003]
gi|357201516|gb|AET59413.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)
[Paenibacillus terrae HPL-003]
Length = 225
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV++ LV+ G YN F RV GF+ Q D G G P +
Sbjct: 68 IKLELYPEVAPNTVNNFISLVQKGAYNGTIFHRVIPGFMIQGGDPQGNGTGGPG---YSI 124
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ E G + +KH RG+LSM R +D +SA S F I++ DA +LDGQYA FGKVT G
Sbjct: 125 KGEFKSNGVNNTLKHTRGVLSMARSADLDSAGSQFFIMVADADYLDGQYAAFGKVTSG 182
>gi|331270558|ref|YP_004397050.1| peptidyl-prolyl isomerase [Clostridium botulinum BKT015925]
gi|329127108|gb|AEB77053.1| Peptidylprolyl isomerase [Clostridium botulinum BKT015925]
Length = 172
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ L+ G Y+ F RV GF+ Q D G G P ++ E
Sbjct: 19 LYPEIAPNTVNNFISLINKGFYDGVIFHRVIPGFMIQGGDPDGTGMGGPG---YSIKGEF 75
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
T G +D+KH +G+LSM R P+SA S F I++ DAPHLD QYA FGKV +G E K
Sbjct: 76 TSNGFKNDLKHTKGVLSMARAMSPDSAGSQFFIMVADAPHLDKQYASFGKVIEGMEVADK 135
Query: 163 L 163
+
Sbjct: 136 I 136
>gi|220928827|ref|YP_002505736.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
cellulolyticum H10]
gi|219999155|gb|ACL75756.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
cellulolyticum H10]
Length = 173
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 78/141 (55%), Gaps = 17/141 (12%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ G+I + YP +AP TV++ L+ G YN F RV GF+ Q D G G
Sbjct: 7 VTFEMENGNIMKAELYPEIAPNTVNNFISLINKGFYNGVIFHRVIPGFMIQGGDPEGTGV 66
Query: 89 SAPMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
P + ++ GEFS D+KH +G+LSM R P+SA S F I++ APH
Sbjct: 67 GGP---------DYSIKGEFSSNGFKNDLKHDKGVLSMARTMVPDSAGSQFFIMVERAPH 117
Query: 143 LDGQYAVFGKVTKGDETLRKL 163
LDGQYA FGKVT+G E ++
Sbjct: 118 LDGQYAAFGKVTEGIEEADRI 138
>gi|384262811|ref|YP_005417998.1| peptidyl-prolyl cis-trans isomerase [Rhodospirillum photometricum
DSM 122]
gi|378403912|emb|CCG09028.1| Peptidyl-prolyl cis-trans isomerase [Rhodospirillum photometricum
DSM 122]
Length = 189
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 19/184 (10%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFG-----FYPSVAPQTVDHI 56
+ + + L+ + T ++ DP+ T Y D+E G P +AP+ VD I
Sbjct: 8 VGTMGVLLSCXGIGMTDATAADPE--------NTLYMDLETGRVVIEMRPDLAPKHVDRI 59
Query: 57 FKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVR 115
L R G Y+ F RV GF+ Q D G GR +E+ + AE + S +HVR
Sbjct: 60 KTLARQGFYDGTVFHRVIDGFMVQGGDPTGTGRGG--SELPDLPAEFS---PSSKARHVR 114
Query: 116 GILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFV 175
G LSM R ++PNSA S F I+L A HLDGQY+++G+VT+G + + +++ R G
Sbjct: 115 GALSMARTANPNSANSQFFIMLAPATHLDGQYSIWGQVTQGMDLVDRIKKGDPRANGAVT 174
Query: 176 MPTE 179
P +
Sbjct: 175 DPDK 178
>gi|319404138|emb|CBI77729.1| peptidyl prolyl cis-trans isomerase [Bartonella rochalimae ATCC
BAA-1498]
Length = 170
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
+P+ ++ +T G++ +P +AP V I +LVR G Y+ F RV F+AQ
Sbjct: 3 EPKDPENTLILETTKGEVVIELFPDLAPAHVTRIKELVREGAYDNVVFHRVIDDFMAQTG 62
Query: 83 DVVGGRSAPMN-EVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
DV G+ + R+ + + EFS++ H RG +SM R +PNSA S F I L
Sbjct: 63 DVQFGKKNDQKFNLSRIGMGGSDKPDLKAEFSNLPHKRGTVSMARSQNPNSANSQFFICL 122
Query: 138 GDAPHLDGQYAVFGKVTKGDETLRKLE 164
DAP L+ QY+++G+V KG E + K++
Sbjct: 123 ADAPWLNRQYSIWGQVLKGMENIDKIK 149
>gi|291545033|emb|CBL18142.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Ruminococcus champanellensis 18P13]
Length = 157
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N I+ YP +AP + ++ KLVR G YN F RV GF+ Q G G P
Sbjct: 8 NGKKIKIELYPDIAPISCENFEKLVRQGFYNGLTFHRVIPGFMIQGGCPDGTGMGGPG-- 65
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E G +D+KH RG+LSM R PNSA S F I+ DAPHLDGQYA FGKV
Sbjct: 66 -WSIKGEFAANGVKNDLKHTRGVLSMARSMMPNSAGSQFFIMHEDAPHLDGQYAAFGKVI 124
Query: 155 KGDETLRKLEGLPT 168
+G + + ++ + T
Sbjct: 125 EGMDVVDEIAQVAT 138
>gi|153954926|ref|YP_001395691.1| protein RotA [Clostridium kluyveri DSM 555]
gi|219855373|ref|YP_002472495.1| hypothetical protein CKR_2030 [Clostridium kluyveri NBRC 12016]
gi|146347784|gb|EDK34320.1| RotA [Clostridium kluyveri DSM 555]
gi|219569097|dbj|BAH07081.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 174
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP +AP TV++ L G YN F RV GF+ Q D G G P
Sbjct: 16 IKIELYPDIAPNTVNNFISLAEKGFYNGTIFHRVIPGFMIQGGDPEGTGMGGP------- 68
Query: 99 EAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
++ GEFS D+KH +G++SM R P+SA S F I+ +APHLDGQYA FGK
Sbjct: 69 --GYSIKGEFSSNNFKNDLKHEKGVISMARTMAPDSAGSQFFIMANNAPHLDGQYAAFGK 126
Query: 153 VTKGDETLRKL 163
V +G E + K+
Sbjct: 127 VIEGIEEVYKI 137
>gi|395786446|ref|ZP_10466173.1| hypothetical protein ME5_01491 [Bartonella tamiae Th239]
gi|423716661|ref|ZP_17690851.1| hypothetical protein MEG_00391 [Bartonella tamiae Th307]
gi|395422744|gb|EJF88940.1| hypothetical protein ME5_01491 [Bartonella tamiae Th239]
gi|395428735|gb|EJF94810.1| hypothetical protein MEG_00391 [Bartonella tamiae Th307]
Length = 197
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Query: 4 VIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLG 63
++ + L L + AS+Q + +V GD+ P +AP+ VD + KLV+ G
Sbjct: 8 IMAVILILFGFLAFASAQNHNLDRNNTIVLTLKDGDVAIQLRPDLAPKHVDQVEKLVKEG 67
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSA-----PMNEVQRVEAEKTVVGEFSDVKHVRGIL 118
Y+ F RV GF+AQ DV G+ P + EFS RG +
Sbjct: 68 AYDNVVFHRVIPGFMAQTGDVRFGKKGGEDYNPRRAGMGGSHYPDLYAEFSKEHFKRGTV 127
Query: 119 SMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPT 178
M R +PNSA S F I DAP LDGQY + G+V KG + + K++ T G P
Sbjct: 128 GMARSQNPNSANSQFFICYEDAPFLDGQYTIIGQVIKGMDIVDKIKKGSTSNNGAVDDPD 187
Query: 179 ERITIH 184
I H
Sbjct: 188 IIIKAH 193
>gi|379011764|ref|YP_005269576.1| peptidyl-prolyl cis-trans isomerase RotA [Acetobacterium woodii DSM
1030]
gi|375302553|gb|AFA48687.1| peptidyl-prolyl cis-trans isomerase RotA [Acetobacterium woodii DSM
1030]
Length = 169
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
+E YP +AP TV++ KLV G YN F RV GF+ Q G G P +
Sbjct: 24 MEIELYPEIAPITVENYLKLVNDGFYNGLIFHRVIPGFMIQGGCPQGTGMGGPG---HNI 80
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E + G +D+KHV+G++SM R P+SA S F I++ DAP LDGQYA FGKV G E
Sbjct: 81 KGEFSGNGVVNDLKHVKGVISMARSGMPDSAGSQFFIMVDDAPFLDGQYAAFGKVISGIE 140
Query: 159 T 159
T
Sbjct: 141 T 141
>gi|150391388|ref|YP_001321437.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Alkaliphilus
metalliredigens QYMF]
gi|149951250|gb|ABR49778.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Alkaliphilus
metalliredigens QYMF]
Length = 172
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 16/132 (12%)
Query: 39 DIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQR 97
+I+ YP +AP TV++ L++ G YN F RV GF+ Q D G G P ++
Sbjct: 15 EIKAELYPEIAPNTVNNFISLIKKGFYNGVIFHRVIPGFMIQGGDPEGLGIGGPGYSIK- 73
Query: 98 VEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
GEFS D+ H +G+LSM R +PNSA S F I+ +A HLDGQYA FG
Sbjct: 74 --------GEFSGNGFKNDLVHTKGVLSMARSMNPNSAGSQFFIMADNASHLDGQYAGFG 125
Query: 152 KVTKGDETLRKL 163
KVT+G E + K+
Sbjct: 126 KVTEGIEEVDKI 137
>gi|402300125|ref|ZP_10819666.1| peptidyl-prolyl cis-trans isomerase [Bacillus alcalophilus ATCC
27647]
gi|401724720|gb|EJS98057.1| peptidyl-prolyl cis-trans isomerase [Bacillus alcalophilus ATCC
27647]
Length = 214
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G++ YP VAP+TVD+ LV+ G Y+ F R+ GF+ Q D G G P +
Sbjct: 59 NGGEVVIELYPDVAPKTVDNFVSLVQDGFYDGLTFHRIIPGFMIQGGDPDGNGTGGPGH- 117
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
VE E G +D+KH G++SM R P+SA S F I++ +PHLDG YA FGKVT
Sbjct: 118 --TVEGEFESNGFENDLKHDPGVISMARSQHPDSAGSQFFIMVETSPHLDGDYAGFGKVT 175
Query: 155 KGDETLRKLEGLPTRKEGIFVMPTERI 181
G + + ++ + T + V E++
Sbjct: 176 DGMDVVNEIVAVETDSRDMPVQGQEQV 202
>gi|262277208|ref|ZP_06055001.1| peptidyl-prolyl cis-trans isomerase (PPIase) (Rotamase) [alpha
proteobacterium HIMB114]
gi|262224311|gb|EEY74770.1| peptidyl-prolyl cis-trans isomerase (PPIase) (Rotamase) [alpha
proteobacterium HIMB114]
Length = 187
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ ++ + YG+++ + +AP V+ I +L + G Y+ F RV GF+AQ DV G
Sbjct: 25 NPKITLKLKYGEVKIELFKDIAPNHVERILELSKKGKYDGVAFHRVIDGFMAQTGDVQHG 84
Query: 88 RSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
+ V + + EF+DV H RGILSM R +P+SA S F I PHL
Sbjct: 85 NTKNNFNPAMVGTGGSDLPDLKAEFNDVPHERGILSMARSQNPDSANSQFFICFDTHPHL 144
Query: 144 DGQYAVFGKVTKGDETLRKL-EGLP 167
D QY VFGKVT G E + ++ +G P
Sbjct: 145 DRQYTVFGKVTSGMEFVDQIKKGAP 169
>gi|374849499|dbj|BAL52513.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [uncultured
Bacteroidetes bacterium]
Length = 215
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 2 LNVIRIFLTLITLIGTASSQ------------EDPQLGSARVVFQTNYGDIEFGFYPSVA 49
+N + L + L+ TA S+ E PQ G + +P VA
Sbjct: 10 MNYVLFALVAVGLVTTAFSRSDGDVPPPPPGVERPQYKITVTQNGKTLGSMIIELFPDVA 69
Query: 50 PQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE-AEKTVVGEF 108
P+ V + LV +G YN F RV GF+ Q D ++ P + + ++K V EF
Sbjct: 70 PKHVANFDSLVSIGFYNGTAFHRVIPGFMIQGGDP-NSKTKPREQWGFGDPSQKRVPAEF 128
Query: 109 SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
S + H RGI+S R +DPNSA S F I + DAP LDGQY+VFG+V +G
Sbjct: 129 SKIAHRRGIISAARTADPNSATSQFFICVADAPWLDGQYSVFGRVLQG 176
>gi|297851204|ref|XP_002893483.1| hypothetical protein ARALYDRAFT_890296 [Arabidopsis lyrata subsp.
lyrata]
gi|297339325|gb|EFH69742.1| hypothetical protein ARALYDRAFT_890296 [Arabidopsis lyrata subsp.
lyrata]
Length = 155
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 4/64 (6%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L ++++ S +P+LGSARVVFQT+YGDI GFYP+ AP+TVDHIFKLVRLG YNTN
Sbjct: 14 LAFVSIVKALS--HEPELGSARVVFQTSYGDI--GFYPTAAPKTVDHIFKLVRLGGYNTN 69
Query: 69 HFFR 72
HFFR
Sbjct: 70 HFFR 73
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 49/72 (68%), Gaps = 18/72 (25%)
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSVLKR 205
+YA FGKVTKGDET RKLE +PTR+EGIF+M CE+ERSVLKR
Sbjct: 84 RYAAFGKVTKGDETSRKLEEVPTRREGIFIMS------------------CEEERSVLKR 125
Query: 206 RLTASVIEIERQ 217
RL ASV+E+ERQ
Sbjct: 126 RLQASVVEVERQ 137
>gi|451981086|ref|ZP_21929463.1| Peptidylprolyl isomerase (modular protein) [Nitrospina gracilis
3/211]
gi|451761689|emb|CCQ90712.1| Peptidylprolyl isomerase (modular protein) [Nitrospina gracilis
3/211]
Length = 184
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
Query: 1 MLNVIRI-FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
M N+IR+ F+T+ G +S+ ++ V QT +G+++ F+ AP V + L
Sbjct: 1 MHNLIRVVFITIFMAWGISSTVWAGEI----AVIQTKFGNMKIEFFEDQAPGHVKNFKDL 56
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEK----TVVGEFSDVKHVR 115
+ G Y+ F RV GF+ Q GG N+ + + T+ EFS++ H R
Sbjct: 57 AKKGFYDGTLFHRVIPGFMIQ-----GGDPNTRNQQREMHGMGGPGYTIDAEFSNIPHDR 111
Query: 116 GILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
GI+SM R DPNSA S F I++ DA LD +Y VFG+VT+G E K+
Sbjct: 112 GIVSMARAQDPNSAGSQFFIVVKDAHFLDKKYTVFGRVTEGMEVADKI 159
>gi|392393988|ref|YP_006430590.1| peptidyl-prolyl cis-trans isomerase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525066|gb|AFM00797.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 195
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Query: 16 GTASSQEDPQLGSARVVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVD 74
G A S++D V + G+ I+ YP VAP+TV + LV G Y+ F RV
Sbjct: 24 GCAVSEQDLNEKKPVVTIEMESGNTIKVELYPDVAPETVKNFVSLVEKGFYDGIIFHRVI 83
Query: 75 KGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFS 134
GF+ Q D G ++ E T G +++KH RG++SM R ++PNSA S F
Sbjct: 84 PGFMIQGGDPQGNGMGGCG--YSIKGEFTSNGFRNELKHDRGVISMARTANPNSAGSQFF 141
Query: 135 ILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
++ D+PHLDGQYA FG++ +G E + ++
Sbjct: 142 LMHADSPHLDGQYASFGRIIEGIEEVDRI 170
>gi|255524011|ref|ZP_05390973.1| Peptidylprolyl isomerase [Clostridium carboxidivorans P7]
gi|296186869|ref|ZP_06855270.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
carboxidivorans P7]
gi|255512298|gb|EET88576.1| Peptidylprolyl isomerase [Clostridium carboxidivorans P7]
gi|296048583|gb|EFG88016.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
carboxidivorans P7]
Length = 171
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G I+ YP +AP TV++ L++ G YN F RV GF+ Q +G G P
Sbjct: 13 GVIKAELYPEIAPNTVNNFISLIKKGFYNGIVFHRVIPGFMIQGGCPLGNGTGGPG---Y 69
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
++ E T G +D+KH G+LSM R P+SA S F ++ +APHLDGQYA FGKVT+G
Sbjct: 70 SIKGEFTSNGFKNDLKHTTGVLSMARTMQPDSAGSQFFLMTENAPHLDGQYAAFGKVTEG 129
>gi|260439347|ref|ZP_05793163.1| peptidylprolyl cis-trans isomerase, cyclophilin-type [Butyrivibrio
crossotus DSM 2876]
gi|292808358|gb|EFF67563.1| peptidylprolyl cis-trans isomerase, cyclophilin-type [Butyrivibrio
crossotus DSM 2876]
Length = 174
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ N G I E YP +AP TV++ LV+ G Y+ F RV KGF+ Q D G G
Sbjct: 7 VKFEMNDGSIFEAELYPDIAPNTVNNFISLVKKGFYDGLIFHRVIKGFMIQGGDPQGTGM 66
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E + G +D+KH G+LSM R DP+SA S F I+ +PHLDG YA
Sbjct: 67 GGPG---YSIKGEFSNNGFTNDLKHTPGVLSMARAMDPDSAGSQFFIMHETSPHLDGSYA 123
Query: 149 VFGKVTKGDETLRKL 163
FGKV G + + +
Sbjct: 124 AFGKVINGLDVINTI 138
>gi|407771472|ref|ZP_11118828.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407285464|gb|EKF10964.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 176
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 79/139 (56%), Gaps = 14/139 (10%)
Query: 35 TNYGDIEFG-----FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
T Y D+E G P +AP+ V+ I +L R G Y+ F RV +GF+AQ D G +
Sbjct: 24 TLYLDLEAGRVVIKLRPDLAPKHVERIKELTREGFYDGLTFHRVIEGFMAQGGDPKGDGT 83
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
Q++ AE FS+ HVRG +SM R S+PNSA S F I+ DAPHLDGQY +
Sbjct: 84 G--GSGQKLPAE------FSNENHVRGTVSMARSSNPNSADSQFFIVFADAPHLDGQYTI 135
Query: 150 FGKVTKGDETLRKL-EGLP 167
+G+V G E + L +G P
Sbjct: 136 WGQVVSGMEYVDGLKKGAP 154
>gi|210623348|ref|ZP_03293746.1| hypothetical protein CLOHIR_01696 [Clostridium hiranonis DSM 13275]
gi|210153658|gb|EEA84664.1| hypothetical protein CLOHIR_01696 [Clostridium hiranonis DSM 13275]
Length = 176
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G I+ YP +AP TV++ L+ G YN F RV +GF+ Q G G P
Sbjct: 16 NGGVIKAELYPHIAPNTVNNFISLINKGYYNGIGFHRVIEGFMIQGGCPDGTGMGGPG-- 73
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
+ E T G +++KH RG+LSM R DPNSA S F I+ ++PHLDGQYA FG+V
Sbjct: 74 -YSIRGEFTGNGFTNNLKHERGVLSMARTMDPNSAGSQFFIMHKNSPHLDGQYASFGRVI 132
Query: 155 KGDETLRKLEGLPTRKEGIFVMPT 178
+G + + ++ T K G PT
Sbjct: 133 EGMDVVDEIA---TTKTGWGDKPT 153
>gi|402573067|ref|YP_006622410.1| peptidyl-prolyl cis-trans isomerase [Desulfosporosinus meridiei DSM
13257]
gi|402254264|gb|AFQ44539.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfosporosinus meridiei DSM 13257]
Length = 170
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 14/157 (8%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
T +Q+ + ++ N I+ YPS+AP+TV++ LV G Y+ F R G
Sbjct: 2 TNETQDQAKENPIVIIEMENDNTIKIELYPSIAPETVENFISLVSEGFYDGLIFHRCIPG 61
Query: 77 FVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAA 130
F+ Q D G ++KT+ GEF+ D++H RG++SM R S PNSA+
Sbjct: 62 FMIQGGDPNGTGMGG--------SKKTIRGEFTGNGFKNDLRHDRGVISMARTSAPNSAS 113
Query: 131 SSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLP 167
S F I++ + HLDGQYA FGKV +G E + ++ P
Sbjct: 114 SQFFIVVKASSHLDGQYASFGKVIEGMEEVDRIVNAP 150
>gi|375307295|ref|ZP_09772584.1| peptidyl-prolyl cis-trans isomerase precursor [Paenibacillus sp.
Aloe-11]
gi|375080640|gb|EHS58859.1| peptidyl-prolyl cis-trans isomerase precursor [Paenibacillus sp.
Aloe-11]
Length = 225
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV++ LV+ G YN F RV GF+ Q D G G P +
Sbjct: 68 IKLELYPEVAPNTVNNFISLVQKGAYNGTIFHRVIPGFMIQGGDPQGNGTGGPG---YSI 124
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E G + +KH RG+LSM R +D +SA S F I++ +A +LDGQYA FGKVT G E
Sbjct: 125 KGEFKSNGFNNTLKHTRGVLSMARSADLDSAGSQFFIMVANADYLDGQYAAFGKVTSGME 184
Query: 159 TL 160
+
Sbjct: 185 VV 186
>gi|261368296|ref|ZP_05981179.1| peptidylprolyl cis-trans isomerase, cyclophilin-type
[Subdoligranulum variabile DSM 15176]
gi|282569666|gb|EFB75201.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Subdoligranulum variabile DSM 15176]
Length = 156
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 76/140 (54%), Gaps = 5/140 (3%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
R+ Q N I+ P AP T ++ KLV+ G YN F RV GF+ Q G G
Sbjct: 3 RITMQ-NGKTIDIELNPETAPITCENFEKLVKQGFYNGLTFHRVIPGFMIQGGCPKGNGT 61
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ A V +++KH RG++SM R DPNSA S F I+ DAPHLDG+YA
Sbjct: 62 GGPGWNIKGEFAHNGVA---NNLKHTRGVISMARAMDPNSAGSQFFIMHQDAPHLDGEYA 118
Query: 149 VFGKVTKGDETLRKLEGLPT 168
FGKV G + + ++ G+ T
Sbjct: 119 AFGKVVSGMDVVDEIAGVAT 138
>gi|225019429|ref|ZP_03708621.1| hypothetical protein CLOSTMETH_03382 [Clostridium methylpentosum
DSM 5476]
gi|224947758|gb|EEG28967.1| hypothetical protein CLOSTMETH_03382 [Clostridium methylpentosum
DSM 5476]
Length = 172
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP +AP TV + LV+ G Y+ F RV GF+ Q D G G P +
Sbjct: 16 IKIELYPEIAPNTVKNFISLVQKGFYDGTIFHRVIPGFMIQGGDPDGVGTGGPG---YHI 72
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E G +D+KH +G+LSM R P+SA S F I++ DAPHLDG YA FGKV +G E
Sbjct: 73 KGEFANNGFKNDLKHTKGVLSMARAMHPDSAGSQFFIMVADAPHLDGDYAAFGKVIEGIE 132
Query: 159 TLRKL 163
++
Sbjct: 133 EADRI 137
>gi|306843962|ref|ZP_07476557.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
inopinata BO1]
gi|306275717|gb|EFM57441.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
inopinata BO1]
Length = 196
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 19 SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFV 78
+S DP+ V+ + GD+ P +AP+ V I KLVR G YN F RV GF+
Sbjct: 24 ASAADPE---NTVILKLKDGDVTLALRPDLAPKHVAQIKKLVREGAYNGVAFHRVIPGFM 80
Query: 79 AQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFS 134
AQ DV G + RV + + EFS VRG + M R +PNSA S F
Sbjct: 81 AQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKESFVRGTVGMARSQNPNSANSQFF 140
Query: 135 ILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
I+ D P L+GQY V GKV G + + K++
Sbjct: 141 IMFDDGPFLNGQYTVVGKVVSGMDAVDKIK 170
>gi|49474363|ref|YP_032405.1| peptidyl prolyl cis-trans isomerase b [Bartonella quintana str.
Toulouse]
gi|49239867|emb|CAF26265.1| Peptidyl prolyl cis-trans isomerase b [Bartonella quintana str.
Toulouse]
Length = 170
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + + +AP+ V I +L + G YN F RV GF+AQ DV G+
Sbjct: 11 LILETTKGRVVIELFADLAPRHVAQIRRLTKEGAYNNVVFHRVISGFMAQTGDVQFGKKD 70
Query: 91 PMN-EVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
N + +RV + EFS++ H RG +SM R +PNSA S F I DAP LD
Sbjct: 71 SANFDPKRVGTGGSNYPNIPAEFSNLSHKRGTVSMARSQNPNSANSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGQVIEGMENVDKIK 149
>gi|312796652|ref|YP_004029574.1| peptidyl-prolyl cis-trans isomerase [Burkholderia rhizoxinica HKI
454]
gi|312168427|emb|CBW75430.1| Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) [Burkholderia
rhizoxinica HKI 454]
Length = 219
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 99/197 (50%), Gaps = 25/197 (12%)
Query: 9 LTLITLIGTASSQEDP----------QLGSAR--VVFQTNYGDIEFGFYPSVAPQTVDHI 56
L L L+GTA P Q G++ V+F+T+ G+I YP AP+TVD+
Sbjct: 24 LLLSALLGTALIASAPVHAQSHAGTRQAGASHPNVLFKTSMGEIRVELYPEKAPRTVDNF 83
Query: 57 FKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRG 116
+ V G YN F RV +GF+ Q GG P E Q+ + + +K+ G
Sbjct: 84 IQYVASGQYNNTIFHRVIRGFMIQ-----GGGFTPEME-QKPTRAPIPLESRNGLKNATG 137
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLD------GQYAVFGKVTKGDETLRKLEGLPTRK 170
++M R +DPNSA++ F I D P+LD YAVFGKV G + ++K+E PT
Sbjct: 138 SIAMARTNDPNSASAQFFINTVDNPNLDYPNPDGHGYAVFGKVISGLDVVKKIEATPTAT 197
Query: 171 EGIFV-MPTERITIHSS 186
G F +P + I I S+
Sbjct: 198 HGSFSDVPQKPIVIQSA 214
>gi|238925281|ref|YP_002938798.1| peptidylprolyl isomerase [Eubacterium rectale ATCC 33656]
gi|238876957|gb|ACR76664.1| peptidylprolyl isomerase [Eubacterium rectale ATCC 33656]
gi|291524422|emb|CBK90009.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Eubacterium rectale DSM 17629]
gi|291527560|emb|CBK93146.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Eubacterium rectale M104/1]
Length = 173
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ L+ Y+ F RV KGF+ Q D G G P E++ E
Sbjct: 21 LYPEIAPNTVNNFISLINHNFYDGVCFHRVIKGFMLQGGDPDGNGTGGPGYEIK---GEF 77
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
T G +D+KH G+LSM R P+SA S F I+ DAPHLDG+YA FGKV +G + + K
Sbjct: 78 THNGFKNDLKHTAGVLSMARTMIPDSAGSQFFIMHQDAPHLDGEYAAFGKVIEGMDVVNK 137
Query: 163 L 163
+
Sbjct: 138 I 138
>gi|440784926|ref|ZP_20961963.1| peptidyl-prolyl isomerase [Clostridium pasteurianum DSM 525]
gi|440218576|gb|ELP57795.1| peptidyl-prolyl isomerase [Clostridium pasteurianum DSM 525]
Length = 171
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ L++ G YN F RV GFV Q G + N ++ E
Sbjct: 19 LYPDIAPNTVNNFISLIKKGFYNGLIFHRVIPGFVIQGGCPNGTGTG--NPGYSIKGEFE 76
Query: 104 VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
+ G +D+KH G+LSM R P+SA S F +++GDAPHLD QYA FGK+ +G + + +
Sbjct: 77 INGFKNDLKHTEGVLSMARAMSPDSAGSQFFVMVGDAPHLDRQYAGFGKIIEGLDVAKNI 136
Query: 164 EGLPT 168
+ T
Sbjct: 137 TKVKT 141
>gi|395789454|ref|ZP_10468974.1| hypothetical protein ME9_00691 [Bartonella taylorii 8TBB]
gi|395429997|gb|EJF96049.1| hypothetical protein ME9_00691 [Bartonella taylorii 8TBB]
Length = 170
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + F+ +AP V I +LVR G Y+ F RV GF+AQ DV G +
Sbjct: 11 LILETTKGRVVIDFFADLAPSHVARIKELVREGAYDNVIFHRVIDGFMAQTGDVEFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ R + + EFS++ H RG +SM R +PNSA S F I DAP LD
Sbjct: 71 GDKFNLSRAGMGGSEKPNLTAEFSNLSHKRGTVSMARSQNPNSANSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G V +G E + K++
Sbjct: 131 QYSIWGHVVEGMENIDKIK 149
>gi|227500319|ref|ZP_03930386.1| peptidylprolyl isomerase [Anaerococcus tetradius ATCC 35098]
gi|227217605|gb|EEI82917.1| peptidylprolyl isomerase [Anaerococcus tetradius ATCC 35098]
Length = 174
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP +AP TV++ L++ G Y+ F RV K F+ Q D G G
Sbjct: 8 VTIEMENGDIIKAELYPDIAPNTVNNFISLIKKGFYDGLIFHRVIKNFMIQGGDPQGTGM 67
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E + G +D+KH RG+LSM R P+SA S F I+ D+PHLDGQYA
Sbjct: 68 GGPG---YAIKGEFNMNGFKNDLKHERGVLSMARSFMPDSAGSQFFIMHQDSPHLDGQYA 124
Query: 149 VFGKVTKGDETLRKLEGLPTRKE 171
FGKV +G + + K+ T ++
Sbjct: 125 GFGKVIEGMDVVDKIAASKTDRQ 147
>gi|149178874|ref|ZP_01857453.1| hypothetical protein PM8797T_17869 [Planctomyces maris DSM 8797]
gi|148842286|gb|EDL56670.1| hypothetical protein PM8797T_17869 [Planctomyces maris DSM 8797]
Length = 178
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+VVF+T G I+ YP VAP +I L ++G Y+ F RV FV Q+
Sbjct: 24 QVVFETTKGTIKMDLYPDVAPGHCKNIIGLTKIGFYDGIIFHRVIPDFVVQIG------- 76
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
P T+ EF+++ H GILSM R SDPNSA S F I LG PHLD QY V
Sbjct: 77 CPQ-GTGTGGPGYTIDAEFNNLPHETGILSMARTSDPNSAGSQFFICLGRVPHLDNQYTV 135
Query: 150 FGKVTKGD 157
FGK + +
Sbjct: 136 FGKTSDAE 143
>gi|395765222|ref|ZP_10445838.1| hypothetical protein MCO_01120 [Bartonella sp. DB5-6]
gi|395413075|gb|EJF79554.1| hypothetical protein MCO_01120 [Bartonella sp. DB5-6]
Length = 170
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + F+ +AP V I +LVR G Y+ F RV GF+AQ DV G +
Sbjct: 11 LILETTKGRVVIEFFADLAPSHVARIKELVREGAYDNVIFHRVIDGFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
++ R + + EFS++ H RG +SM R +PNSA S F I D+P LD
Sbjct: 71 DEKFDLSRAGMGGSEKPNLTAEFSNLSHKRGTVSMARSQNPNSANSQFFICFADSPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGQVVEGMENIDKIK 149
>gi|167045017|gb|ABZ09681.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[uncultured marine crenarchaeote HF4000_APKG8G15]
Length = 162
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ +T++G I+F P AP+TV + L + G Y+ F RV GF+ Q D
Sbjct: 4 AIIKTDFGSIKFSLLPDTAPETVRNFVTLAKKGFYDGTLFHRVIPGFMIQGGDPNTKDPN 63
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGD--APHLDGQYA 148
++ T+ EFS H+ GI+SM R +DP+SA S F I+ D LD QY
Sbjct: 64 KKSQWGMGGPGHTIKAEFSSRSHLEGIVSMARATDPDSAGSQFFIVTSDNNTEALDRQYT 123
Query: 149 VFGKVTKGDETLRKLEGLP 167
VFGKVT+G + K+E LP
Sbjct: 124 VFGKVTEGMDVAHKIENLP 142
>gi|119775833|ref|YP_928573.1| peptidyl-prolyl cis-trans isomerase [Shewanella amazonensis SB2B]
gi|119768333|gb|ABM00904.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin
family-like protein [Shewanella amazonensis SB2B]
Length = 187
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 18/148 (12%)
Query: 13 TLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFR 72
LIGT E+ V +T+ GD+ F F+P+ AP+TV + +L + G Y F+R
Sbjct: 22 ALIGTGVKAEN------LVTIETSLGDMTFEFFPNEAPRTVANFQRLAQSGWYEGKSFYR 75
Query: 73 VDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASS 132
V KG V Q S N RVEAE F+ H++G L + R DPNS ++
Sbjct: 76 VVKGHVIQAG------SLDENTEPRVEAE------FNQHPHIKGTLGLARDEDPNSGSTE 123
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETL 160
F I PHLDG+Y VFG++ +G+ L
Sbjct: 124 FYICHEARPHLDGRYTVFGQLVEGEAVL 151
>gi|326201735|ref|ZP_08191606.1| Peptidylprolyl isomerase [Clostridium papyrosolvens DSM 2782]
gi|325988335|gb|EGD49160.1| Peptidylprolyl isomerase [Clostridium papyrosolvens DSM 2782]
Length = 173
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 77/141 (54%), Gaps = 17/141 (12%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ G+I + YP +AP TV++ L+ G YN F RV GF+ Q D G G
Sbjct: 7 VTFEMENGNIMKAELYPEIAPNTVNNFISLINKGFYNGVIFHRVIPGFMIQGGDPEGTGA 66
Query: 89 SAPMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
P + ++ GEFS D+KH +G+LSM R P+SA S F +++ APH
Sbjct: 67 GGP---------DYSIKGEFSSNGFKNDLKHDKGVLSMARTMVPDSAGSQFFVMVEKAPH 117
Query: 143 LDGQYAVFGKVTKGDETLRKL 163
LDGQYA FGKV +G E ++
Sbjct: 118 LDGQYAAFGKVIEGIEEADRI 138
>gi|376260443|ref|YP_005147163.1| peptidyl-prolyl cis-trans isomerase [Clostridium sp. BNL1100]
gi|373944437|gb|AEY65358.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Clostridium sp. BNL1100]
Length = 173
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 70/127 (55%), Gaps = 16/127 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ L+ G YN F RV GF+ Q D G G P +
Sbjct: 21 LYPEIAPNTVNNFISLINKGFYNGVIFHRVIPGFMIQGGDPEGTGTGGP---------DY 71
Query: 103 TVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
++ GEFS D+KH +G+LSM R P+SA S F I++ APHLDGQYA FGKV +G
Sbjct: 72 SIKGEFSSNGFKNDLKHDKGVLSMARTMVPDSAGSQFFIMVEKAPHLDGQYAAFGKVIEG 131
Query: 157 DETLRKL 163
E ++
Sbjct: 132 IEEADRI 138
>gi|169351418|ref|ZP_02868356.1| hypothetical protein CLOSPI_02198 [Clostridium spiroforme DSM 1552]
gi|169291640|gb|EDS73773.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
spiroforme DSM 1552]
Length = 160
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 28 SARVVFQTNYGDIEFG-FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
+ ++ + G++ G YP +AP TV++ L+ + F RV GF+ Q G
Sbjct: 3 TVKIAIEMEDGEVMKGELYPEIAPITVENFLNLIDQDFFAGLIFHRVIPGFMIQG----G 58
Query: 87 GRSAPMN--EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
G N E + ++ E + G +D+ H RG+LSM R P+SA+S F I+ DAPHLD
Sbjct: 59 GYDKDFNHHEAKSIKGEFSSNGVKNDLLHTRGVLSMARTMVPDSASSQFFIMHEDAPHLD 118
Query: 145 GQYAVFGKVTKGDETLRKLEGLP 167
GQYA FGK+T+G E + K+ +P
Sbjct: 119 GQYAAFGKITEGLEIVDKIANMP 141
>gi|153812377|ref|ZP_01965045.1| hypothetical protein RUMOBE_02776 [Ruminococcus obeum ATCC 29174]
gi|149831539|gb|EDM86626.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruminococcus
obeum ATCC 29174]
Length = 253
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 76/147 (51%), Gaps = 20/147 (13%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YGDI+ AP TV + KL + G Y+ F+R+ GF+ Q D G + E
Sbjct: 100 DYGDIKVELDADTAPVTVTNFVKLAQEGFYDGLTFWRIMDGFMMQGGDPKGNGTGGSGE- 158
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
T+ GEFS D+ HVRG +SM R +DP+SA+S F I+ D+ LDG YA
Sbjct: 159 -------TIKGEFSSNGVKNDISHVRGTISMARSTDPDSASSQFFIVQSDSTFLDGDYAA 211
Query: 150 FGKVTKG----DETLRKLEGLPTRKEG 172
FGKVT+G DE + PT G
Sbjct: 212 FGKVTEGMDIVDEICKNAN--PTDDNG 236
>gi|392426336|ref|YP_006467330.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfosporosinus acidiphilus SJ4]
gi|391356299|gb|AFM41998.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfosporosinus acidiphilus SJ4]
Length = 173
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Query: 19 SSQEDPQLGSARVVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
S+Q+ Q + V + G+I + YP +AP TV + LV G Y+ F RV F
Sbjct: 5 STQDLEQTKNPLVAIEMENGNIIKIELYPDIAPDTVKNFMTLVSQGFYDGLIFHRVIPSF 64
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q D G + Q + E + G +D+KH RG++SM R ++PNSA+S F I++
Sbjct: 65 MIQGGDPNG--TGMGGSKQAIRGEFSANGFKNDLKHDRGVISMARTANPNSASSQFFIVV 122
Query: 138 GDAPHLDGQYAVFGKVTKGDETLRKLEGLP 167
+ HLDGQYA FGKV +G E + ++ +P
Sbjct: 123 KASSHLDGQYASFGKVIEGMEEVDRIVNVP 152
>gi|23501972|ref|NP_698099.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella suis
1330]
gi|163843361|ref|YP_001627765.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella suis
ATCC 23445]
gi|225627569|ref|ZP_03785606.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
ceti str. Cudo]
gi|225852596|ref|YP_002732829.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
melitensis ATCC 23457]
gi|256263910|ref|ZP_05466442.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 2 str.
63/9]
gi|256369521|ref|YP_003107031.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
microti CCM 4915]
gi|260565644|ref|ZP_05836128.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|261219441|ref|ZP_05933722.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261222261|ref|ZP_05936542.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314182|ref|ZP_05953379.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317729|ref|ZP_05956926.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321937|ref|ZP_05961134.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261752400|ref|ZP_05996109.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella suis
bv. 5 str. 513]
gi|261755060|ref|ZP_05998769.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261758285|ref|ZP_06001994.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99]
gi|265988760|ref|ZP_06101317.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265991175|ref|ZP_06103732.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995011|ref|ZP_06107568.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998226|ref|ZP_06110783.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294852434|ref|ZP_06793107.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL 07-0026]
gi|340790713|ref|YP_004756178.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
pinnipedialis B2/94]
gi|376280766|ref|YP_005154772.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella suis
VBI22]
gi|384211461|ref|YP_005600543.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
melitensis M5-90]
gi|384224760|ref|YP_005615924.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella suis
1330]
gi|384408570|ref|YP_005597191.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
melitensis M28]
gi|384445155|ref|YP_005603874.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
melitensis NI]
gi|81752580|sp|Q8G0J9.1|PPI1_BRUSU RecName: Full=Probable peptidyl-prolyl cis-trans isomerase;
Short=PPIase; AltName: Full=Rotamase; Flags: Precursor
gi|143358355|sp|Q8YHB5.2|PPI1_BRUME RecName: Full=Probable peptidyl-prolyl cis-trans isomerase;
Short=PPIase; AltName: Full=Rotamase; Flags: Precursor
gi|23347920|gb|AAN30014.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
suis 1330]
gi|163674084|gb|ABY38195.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella suis
ATCC 23445]
gi|225617574|gb|EEH14619.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
ceti str. Cudo]
gi|225640961|gb|ACO00875.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
melitensis ATCC 23457]
gi|255999683|gb|ACU48082.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
microti CCM 4915]
gi|260151712|gb|EEW86806.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260920845|gb|EEX87498.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260924530|gb|EEX91098.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294627|gb|EEX98123.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296952|gb|EEY00449.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303208|gb|EEY06705.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261738269|gb|EEY26265.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99]
gi|261742153|gb|EEY30079.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella suis
bv. 5 str. 513]
gi|261744813|gb|EEY32739.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262552694|gb|EEZ08684.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262766124|gb|EEZ11913.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001959|gb|EEZ14534.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094043|gb|EEZ17977.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 2 str.
63/9]
gi|264660957|gb|EEZ31218.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294821023|gb|EFG38022.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. NVSL 07-0026]
gi|326409117|gb|ADZ66182.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
melitensis M28]
gi|326538824|gb|ADZ87039.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
melitensis M5-90]
gi|340559172|gb|AEK54410.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Brucella
pinnipedialis B2/94]
gi|343382940|gb|AEM18432.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
suis 1330]
gi|349743146|gb|AEQ08689.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
melitensis NI]
gi|358258365|gb|AEU06100.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
suis VBI22]
Length = 196
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 12 ITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFF 71
I + TAS+ DP+ V+ + GD+ P +AP+ V I KLVR G YN F
Sbjct: 18 IGAVQTASAA-DPE---NTVILKLKDGDVALELRPDLAPKHVAQIKKLVREGAYNGVAFH 73
Query: 72 RVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPN 127
RV GF+AQ DV G + RV + + EFS VRG + M R +PN
Sbjct: 74 RVIPGFMAQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPN 133
Query: 128 SAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
SA S F I+ D P L+GQY V GKV G + + K++
Sbjct: 134 SANSQFFIMFDDGPFLNGQYTVVGKVVSGMDAVDKIK 170
>gi|306841821|ref|ZP_07474504.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella sp.
BO2]
gi|306288102|gb|EFM59496.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella sp.
BO2]
Length = 196
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 12 ITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFF 71
I + TAS+ DP+ V+ + GD+ P +AP+ V I KLVR G YN F
Sbjct: 18 IGAVQTASAA-DPE---NTVILKLKDGDVALELRPDLAPKHVAQIKKLVREGAYNGVAFH 73
Query: 72 RVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPN 127
RV GF+AQ DV G + RV + + EFS VRG + M R +PN
Sbjct: 74 RVIPGFMAQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPN 133
Query: 128 SAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
SA S F I+ D P L+GQY V GKV G + + K++
Sbjct: 134 SANSQFFIMFDDGPFLNGQYTVVGKVVSGMDAVDKIK 170
>gi|62290009|ref|YP_221802.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
abortus bv. 1 str. 9-941]
gi|82699937|ref|YP_414511.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis biovar
Abortus 2308]
gi|189024250|ref|YP_001935018.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
abortus S19]
gi|237815517|ref|ZP_04594514.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
abortus str. 2308 A]
gi|260546564|ref|ZP_05822303.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus NCTC 8038]
gi|260754837|ref|ZP_05867185.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 6 str. 870]
gi|260758054|ref|ZP_05870402.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 4 str. 292]
gi|260761878|ref|ZP_05874221.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 2 str. 86/8/59]
gi|260883849|ref|ZP_05895463.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214088|ref|ZP_05928369.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 3 str. Tulya]
gi|297248411|ref|ZP_06932129.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 5 str.
B3196]
gi|376273173|ref|YP_005151751.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus A13334]
gi|423166802|ref|ZP_17153505.1| hypothetical protein M17_00492 [Brucella abortus bv. 1 str. NI435a]
gi|423170824|ref|ZP_17157499.1| hypothetical protein M19_01357 [Brucella abortus bv. 1 str. NI474]
gi|423173094|ref|ZP_17159765.1| hypothetical protein M1A_00492 [Brucella abortus bv. 1 str. NI486]
gi|423178213|ref|ZP_17164857.1| hypothetical protein M1E_02453 [Brucella abortus bv. 1 str. NI488]
gi|423180254|ref|ZP_17166895.1| hypothetical protein M1G_01354 [Brucella abortus bv. 1 str. NI010]
gi|423183386|ref|ZP_17170023.1| hypothetical protein M1I_01355 [Brucella abortus bv. 1 str. NI016]
gi|423185674|ref|ZP_17172288.1| hypothetical protein M1K_00492 [Brucella abortus bv. 1 str. NI021]
gi|423188810|ref|ZP_17175420.1| hypothetical protein M1M_00492 [Brucella abortus bv. 1 str. NI259]
gi|75505277|sp|Q57D43.1|PPI1_BRUAB RecName: Full=Probable peptidyl-prolyl cis-trans isomerase;
Short=PPIase; AltName: Full=Rotamase; Flags: Precursor
gi|123768458|sp|Q2YPY5.1|PPI1_BRUA2 RecName: Full=Probable peptidyl-prolyl cis-trans isomerase;
Short=PPIase; AltName: Full=Rotamase; Flags: Precursor
gi|62196141|gb|AAX74441.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
abortus bv. 1 str. 9-941]
gi|82616038|emb|CAJ11074.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Brucella
melitensis biovar Abortus 2308]
gi|189019822|gb|ACD72544.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Brucella
abortus S19]
gi|237788815|gb|EEP63026.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
abortus str. 2308 A]
gi|260095614|gb|EEW79491.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus NCTC 8038]
gi|260668372|gb|EEX55312.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 4 str. 292]
gi|260672310|gb|EEX59131.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 2 str. 86/8/59]
gi|260674945|gb|EEX61766.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 6 str. 870]
gi|260873377|gb|EEX80446.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915695|gb|EEX82556.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 3 str. Tulya]
gi|297175580|gb|EFH34927.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus bv. 5 str.
B3196]
gi|363400779|gb|AEW17749.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus A13334]
gi|374539402|gb|EHR10906.1| hypothetical protein M19_01357 [Brucella abortus bv. 1 str. NI474]
gi|374543033|gb|EHR14517.1| hypothetical protein M17_00492 [Brucella abortus bv. 1 str. NI435a]
gi|374543649|gb|EHR15131.1| hypothetical protein M1A_00492 [Brucella abortus bv. 1 str. NI486]
gi|374545452|gb|EHR16913.1| hypothetical protein M1E_02453 [Brucella abortus bv. 1 str. NI488]
gi|374548818|gb|EHR20265.1| hypothetical protein M1G_01354 [Brucella abortus bv. 1 str. NI010]
gi|374549449|gb|EHR20892.1| hypothetical protein M1I_01355 [Brucella abortus bv. 1 str. NI016]
gi|374558468|gb|EHR29861.1| hypothetical protein M1M_00492 [Brucella abortus bv. 1 str. NI259]
gi|374559765|gb|EHR31150.1| hypothetical protein M1K_00492 [Brucella abortus bv. 1 str. NI021]
Length = 196
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 12 ITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFF 71
I + TAS+ DP+ V+ + GD+ P +AP+ V I KLVR G YN F
Sbjct: 18 IGAVQTASAA-DPE---NTVILKLKDGDVALEIRPDLAPKHVAQIKKLVREGAYNGVAFH 73
Query: 72 RVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPN 127
RV GF+AQ DV G + RV + + EFS VRG + M R +PN
Sbjct: 74 RVIPGFMAQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPN 133
Query: 128 SAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
SA S F I+ D P L+GQY V GKV G + + K++
Sbjct: 134 SANSQFFIMFDDGPFLNGQYTVVGKVVSGMDAVDKIK 170
>gi|395767180|ref|ZP_10447715.1| hypothetical protein MCS_00648 [Bartonella doshiae NCTC 12862]
gi|395414493|gb|EJF80935.1| hypothetical protein MCS_00648 [Bartonella doshiae NCTC 12862]
Length = 170
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
+VF+T G + + +AP V + +LVR G Y+ F RV +GF+AQ DV G+
Sbjct: 11 IVFETTKGRVVIELFADLAPGHVARVKELVREGAYDNVVFHRVIEGFMAQTGDVKFGKKD 70
Query: 90 --------APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
A M + + + EFS++ H RG +SM R +PNSA S F I DAP
Sbjct: 71 GEKFDLSCAGMGGSDKPD----LTAEFSNLSHKRGTVSMARSQNPNSANSQFFICFADAP 126
Query: 142 HLDGQYAVFGKVTKGDETLRKLE-GLPTRKEGIFVMPT 178
LD QY+V+G+V +G E + K++ G P I + T
Sbjct: 127 WLDRQYSVWGQVVEGMENVDKIKRGEPVIDPDIILKAT 164
>gi|17987170|ref|NP_539804.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str.
16M]
gi|17982837|gb|AAL52068.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str.
16M]
Length = 176
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 19 SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFV 78
+S DP+ V+ + GD+ P +AP+ V I KLVR G YN F RV GF+
Sbjct: 4 ASAADPE---NTVILKLKDGDVALELRPDLAPKHVAQIKKLVREGAYNGVAFHRVIPGFM 60
Query: 79 AQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFS 134
AQ DV G + RV + + EFS VRG + M R +PNSA S F
Sbjct: 61 AQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPNSANSQFF 120
Query: 135 ILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
I+ D P L+GQY V GKV G + + K++
Sbjct: 121 IMFDDGPFLNGQYTVVGKVVSGMDAVDKIK 150
>gi|15965337|ref|NP_385690.1| peptidyl-prolyl cis-trans isomerase B protein [Sinorhizobium
meliloti 1021]
gi|334316218|ref|YP_004548837.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti AK83]
gi|384529333|ref|YP_005713421.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti BL225C]
gi|384536416|ref|YP_005720501.1| putative peptidyl-prolyl cis-trans isomerase B protein
[Sinorhizobium meliloti SM11]
gi|407720527|ref|YP_006840189.1| peptidyl-prolyl cis-trans isomerase [Sinorhizobium meliloti Rm41]
gi|418401416|ref|ZP_12974945.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti CCNWSX0020]
gi|433613358|ref|YP_007190156.1| Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Sinorhizobium meliloti GR4]
gi|21636312|gb|AAM69921.1|AF451910_1 glucuronan lyase [Sinorhizobium meliloti]
gi|15074517|emb|CAC46163.1| Putative peptidyl-prolyl cis-trans isomerase B [Sinorhizobium
meliloti 1021]
gi|333811509|gb|AEG04178.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
meliloti BL225C]
gi|334095212|gb|AEG53223.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
meliloti AK83]
gi|336033308|gb|AEH79240.1| putative peptidyl-prolyl cis-trans isomerase B protein
[Sinorhizobium meliloti SM11]
gi|359504662|gb|EHK77195.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti CCNWSX0020]
gi|407318759|emb|CCM67363.1| putative peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti Rm41]
gi|429551548|gb|AGA06557.1| Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Sinorhizobium meliloti GR4]
Length = 169
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +L R G Y+ F RV + F+AQ DV G++
Sbjct: 11 IIMETTKGRVVIELRPDVAPGHVARIKELTREGAYDGVVFHRVIEDFMAQTGDVQYGKTG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFSDV HVRG SM R PNSA S F I DAP L+
Sbjct: 71 GEQFNPSRAGMGGSSKPDLKAEFSDVSHVRGTCSMARSQMPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTRKEGIFV 175
QY+V+G+V +G E + ++ G P R V
Sbjct: 131 QYSVWGQVVEGMENIDNIKRGEPVRDPDTIV 161
>gi|395778015|ref|ZP_10458528.1| hypothetical protein MCU_00229 [Bartonella elizabethae Re6043vi]
gi|423715940|ref|ZP_17690161.1| hypothetical protein MEE_01358 [Bartonella elizabethae F9251]
gi|395418324|gb|EJF84651.1| hypothetical protein MCU_00229 [Bartonella elizabethae Re6043vi]
gi|395428384|gb|EJF94461.1| hypothetical protein MEE_01358 [Bartonella elizabethae F9251]
Length = 170
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + + +AP V I +LVR G Y+ F RV GF+AQ DV G +
Sbjct: 11 LILETTKGRVVIELFADLAPGHVARIKELVREGAYDNVIFHRVIDGFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ R + + EFS++ H RG +SM R +PNSA S F I DAP LD
Sbjct: 71 GEKFNLSRAGMGGSEKPNLTAEFSNLSHKRGTVSMARSQNPNSANSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++GKV +G E + K++
Sbjct: 131 QYSIWGKVVEGMENVDKIK 149
>gi|358061861|ref|ZP_09148513.1| hypothetical protein HMPREF9473_00575 [Clostridium hathewayi
WAL-18680]
gi|356699885|gb|EHI61393.1| hypothetical protein HMPREF9473_00575 [Clostridium hathewayi
WAL-18680]
Length = 172
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ GDI + YP +AP TV++ LV G YN F RV GF+ Q G G
Sbjct: 6 VTFEMENGDIMKAELYPEIAPNTVNNFISLVNRGFYNGLIFHRVINGFMIQGGCPDGNGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E + G + +KH G+LSM R DPNSA S F I+ ++PHLDG YA
Sbjct: 66 GDPG---YSIKGEFSQNGFANQLKHTEGVLSMARAMDPNSAGSQFFIMHKNSPHLDGAYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGKV +G + + K+
Sbjct: 123 AFGKVIEGMDVVNKI 137
>gi|182420089|ref|ZP_02951323.1| peptidyl-prolyl cis-trans isomerase Ppi1 [Clostridium butyricum
5521]
gi|237669539|ref|ZP_04529519.1| peptidylprolyl isomerase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376126|gb|EDT73713.1| peptidyl-prolyl cis-trans isomerase Ppi1 [Clostridium butyricum
5521]
gi|237654983|gb|EEP52543.1| peptidylprolyl isomerase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 174
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 8/131 (6%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAPM 92
N G I+ YP VAP TV++ LV G Y+ F RV GF+ Q GG +
Sbjct: 12 NGGVIKAELYPEVAPNTVNNFVDLVNRGFYDGLIFHRVIPGFMIQ-----GGCPEGTGTG 66
Query: 93 NEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
++ E T G +D+KH +G+LSM R P+SA S F I++ DAPHLDGQYA FGK
Sbjct: 67 GPGYSIKGEFTSNGFKNDLKHSKGVLSMARAMHPDSAGSQFFIMVADAPHLDGQYASFGK 126
Query: 153 VTKGDETLRKL 163
V +G + K+
Sbjct: 127 VIEGMDEADKI 137
>gi|423074164|ref|ZP_17062896.1| putative peptidyl-prolyl cis-trans isomerase B [Desulfitobacterium
hafniense DP7]
gi|361854882|gb|EHL06909.1| putative peptidyl-prolyl cis-trans isomerase B [Desulfitobacterium
hafniense DP7]
Length = 191
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 14 LIGTASSQEDPQLGSARVVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFR 72
L G S+ D V + G+ I+ YP VAP+TV + LV G Y+ F R
Sbjct: 18 LGGCTVSEHDLNDKKPVVTIEMESGNTIKIELYPDVAPETVKNFVSLVEKGFYDGIIFHR 77
Query: 73 VDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASS 132
V GF+ Q D G + E T G +++KH RG++SM R ++PNSA S
Sbjct: 78 VIPGFMIQGGDPQGTGMGGCG--YSINGEFTANGFPNNLKHERGVISMARTANPNSAGSQ 135
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
F ++ D+PHLDGQYA FG++ +G E + ++
Sbjct: 136 FFLMHADSPHLDGQYASFGRIIEGIEEVDRI 166
>gi|91784177|ref|YP_559383.1| peptidylprolyl isomerase [Burkholderia xenovorans LB400]
gi|91688131|gb|ABE31331.1| Peptidylprolyl isomerase [Burkholderia xenovorans LB400]
Length = 193
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+F+T+ GDI YP AP+TV + V+ G YN F RV +GF
Sbjct: 19 AFAQSGSQAAHPSVLFKTSEGDIRVELYPEKAPKTVANFLDYVKSGQYNGTIFHRVIRGF 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q G + ++ V+ + +K+ G L+M R SDPNSA + F I
Sbjct: 79 MIQ------GGGYTQSFAEKPTRAPIVLESRNGLKNTTGTLAMARTSDPNSATAQFFINT 132
Query: 138 GDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
D P+ DG YAVFGKVT G + ++K+EG PT G +P + + I S+
Sbjct: 133 VDNAGLDYPNPDGNGYAVFGKVTGGMDVVKKIEGTPTTSRGPMSDVPQKAVVIESA 188
>gi|395784165|ref|ZP_10464004.1| hypothetical protein ME3_00660 [Bartonella melophagi K-2C]
gi|395423920|gb|EJF90108.1| hypothetical protein ME3_00660 [Bartonella melophagi K-2C]
Length = 170
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G++ + +AP V I +LVR G Y+ F RV GF+AQ DV G ++
Sbjct: 11 LILETTKGNVVIELFADLAPGHVVRIKELVREGAYDNVVFHRVIDGFMAQTGDVKFGKKN 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ RV + + EFS++ H RG +SM R +PNSA S F I DAP LD
Sbjct: 71 NEKFDSSRVGMGGSDKPDLKAEFSNISHKRGTVSMARSQNPNSANSQFFICFEDAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V KG E + K++
Sbjct: 131 QYSIWGQVMKGMENVDKIK 149
>gi|354559968|ref|ZP_08979207.1| Peptidylprolyl isomerase [Desulfitobacterium metallireducens DSM
15288]
gi|353539330|gb|EHC08818.1| Peptidylprolyl isomerase [Desulfitobacterium metallireducens DSM
15288]
Length = 229
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 39 DIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQR 97
+I+ YP VAP TV + LV+ G YN F RV F+ Q D G G P
Sbjct: 70 EIKIELYPDVAPNTVKNFISLVQKGFYNGTTFHRVIPQFMIQGGDPQGNGLGGPG---YN 126
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
++ E T G + +KH R ++SM R + PNSA S F I++ AP LDG+YA FGKV G
Sbjct: 127 IKGEFTENGFKNSLKHERSVISMARSNAPNSAGSQFFIMVAAAPSLDGKYAAFGKVLSGM 186
Query: 158 ETLRKLEGLP 167
ET K+ P
Sbjct: 187 ETADKIVSSP 196
>gi|315924186|ref|ZP_07920412.1| peptidyl-prolyl cis-trans isomerase [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622588|gb|EFV02543.1| peptidyl-prolyl cis-trans isomerase [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 164
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMN 93
N G ++ YP VAP TV++ KL++ G Y+ F RV GF+ Q D G G P
Sbjct: 13 ANGGIVKAELYPEVAPITVENFVKLIKEGFYDGLIFHRVIPGFMIQGGDPEGSGMGGPGY 72
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
++ E G +D+KH RG+LSM R P+SA S F I++ APHLDG YA FG+V
Sbjct: 73 SIK---GEFASNGVENDLKHDRGVLSMARSMMPDSAGSQFFIMVEKAPHLDGDYAAFGQV 129
Query: 154 TKG 156
T+G
Sbjct: 130 TEG 132
>gi|302876668|ref|YP_003845301.1| Peptidylprolyl isomerase [Clostridium cellulovorans 743B]
gi|307687343|ref|ZP_07629789.1| Peptidylprolyl isomerase [Clostridium cellulovorans 743B]
gi|302579525|gb|ADL53537.1| Peptidylprolyl isomerase [Clostridium cellulovorans 743B]
Length = 172
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G I+ YP VAP TV++ L++ YN F RV GF+ Q D G G P
Sbjct: 14 GIIKAELYPDVAPNTVNNFISLIKKEFYNGVIFHRVIPGFMIQGGDPNGTGVGGPG---Y 70
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
++ E T G +D+KH G+LSM R PNSA S F I++ ++PHLD +YA FGKV +G
Sbjct: 71 SIKGEFTNNGFKNDLKHTEGVLSMARTMMPNSAGSQFFIMVANSPHLDAEYASFGKVIEG 130
Query: 157 DETLRKL 163
E K+
Sbjct: 131 MEIAHKI 137
>gi|403385422|ref|ZP_10927479.1| peptidyl-prolyl cis-trans isomerase-like 1 [Kurthia sp. JC30]
Length = 209
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 16/132 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV + LV G Y+ F RV F+ Q D G G+ P
Sbjct: 57 LYPKIAPNTVANFISLVEAGKYDGLTFHRVIPEFMIQGGDPEGNGQGGP---------GY 107
Query: 103 TVVGEFSD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
T+ GEFS+ +KH RGI+SM R SDPNSA S F I++ D LDG+YA FGKV KG
Sbjct: 108 TIDGEFSENDFDNTLKHERGIVSMARASDPNSAGSQFFIMVADNAQLDGKYAAFGKVIKG 167
Query: 157 DETLRKLEGLPT 168
+T+ ++ + T
Sbjct: 168 MDTVDEIVNVST 179
>gi|219669021|ref|YP_002459456.1| peptidyl-prolyl isomerase [Desulfitobacterium hafniense DCB-2]
gi|219539281|gb|ACL21020.1| Peptidylprolyl isomerase [Desulfitobacterium hafniense DCB-2]
Length = 169
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99
I+ YP VAP+TV + LV G Y+ F RV GF+ Q D G +
Sbjct: 23 IKIELYPDVAPETVKNFVSLVEKGFYDGIIFHRVIPGFMIQGGDPQGTGMGGCG--YSIN 80
Query: 100 AEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDET 159
E T G +++KH RG++SM R ++PNSA S F ++ D+PHLDGQYA FG++ +G E
Sbjct: 81 GEFTANGFPNNLKHERGVISMARTANPNSAGSQFFLMHADSPHLDGQYASFGRIIEGIEE 140
Query: 160 LRKL 163
+ ++
Sbjct: 141 VDRI 144
>gi|403530651|ref|YP_006665180.1| peptidyl prolyl cis-trans isomerase b [Bartonella quintana RM-11]
gi|403232722|gb|AFR26465.1| peptidyl prolyl cis-trans isomerase b [Bartonella quintana RM-11]
Length = 170
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + + +AP+ V I +L + G YN F RV GF+AQ DV G+
Sbjct: 11 LILETTKGRVVIELFADLAPRHVAQIRRLTKEGAYNNVVFHRVISGFMAQTGDVQFGKKD 70
Query: 91 PMN-EVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
N + +RV + EFS++ H RG +SM R +P+SA S F I DAP LD
Sbjct: 71 SANFDPKRVGTGGSNYPNIPAEFSNLSHKRGTVSMARSQNPDSANSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGQVIEGMENVDKIK 149
>gi|357384491|ref|YP_004899215.1| peptidyl-prolyl cis-trans isomerase [Pelagibacterium halotolerans
B2]
gi|351593128|gb|AEQ51465.1| peptidyl-prolyl cis-trans isomerase [Pelagibacterium halotolerans
B2]
Length = 158
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA----DVVG 86
+V +T+ G++ P +AP V+ + +L R G Y+ F RV GF+AQV + G
Sbjct: 11 IVMETSKGNVVIELRPDLAPGHVERMKELTREGFYDGIVFHRVIDGFMAQVGCPKGNGTG 70
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EFS KHVRG +S R ++PNSA S F I +AP L+GQ
Sbjct: 71 GSDKP-----------DLKAEFSQEKHVRGTVSAARSANPNSANSQFFICFDEAPWLNGQ 119
Query: 147 YAVFGKVTKGDETLRKLE-GLPTRK 170
Y+VFGKV G + + +LE G P R
Sbjct: 120 YSVFGKVIAGMDVVDQLEKGEPVRN 144
>gi|260576739|ref|ZP_05844724.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhodobacter
sp. SW2]
gi|259020991|gb|EEW24302.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhodobacter
sp. SW2]
Length = 199
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 32 VFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAP 91
V + G I P VAP V I L G Y+ F RV GF+AQ DV G+ A
Sbjct: 44 VAGSTTGTIVIDLLPDVAPLHVTQITTLAAQGAYDDVVFHRVIDGFMAQTGDVQYGKGAA 103
Query: 92 MNEVQRVEAE-KTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ +E + EFSDV RG++ M R SDP+SA S F I+ APHLDGQY V
Sbjct: 104 SAQAGMGGSELPDLKAEFSDVSFDRGVVGMARSSDPDSANSQFFIMFAPAPHLDGQYTVV 163
Query: 151 GKVTKGDE---TLRKLEG 165
G+V G E L+K EG
Sbjct: 164 GRVISGMEVVDALKKGEG 181
>gi|189501259|ref|YP_001960729.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Chlorobium
phaeobacteroides BS1]
gi|189496700|gb|ACE05248.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Chlorobium
phaeobacteroides BS1]
Length = 189
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 6 RIFLTLITLI-------GTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFK 58
R+F+ L+ G A+S +P + + G I P +AP V+ I +
Sbjct: 7 RLFIAFFALVLLPCPVCGLAASAHEPDPENT-IYLDIPSGRIVIQLRPEIAPSHVNRIKE 65
Query: 59 LVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGIL 118
L R G Y+ F RV GF+AQ D +G + + K + EFS+ KH+RG +
Sbjct: 66 LTRQGFYDGLAFHRVLPGFMAQTGDPLGDGTG--------GSGKQIKAEFSNEKHLRGTV 117
Query: 119 SMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPT 178
SM R DP+S S F I AP LDG Y+V+GKV G E + ++ G+ PT
Sbjct: 118 SMARAEDPDSGDSQFFICFAPAPFLDGNYSVWGKVISGMEFVDTIKTGSRYNNGVVSNPT 177
Query: 179 ERI 181
I
Sbjct: 178 RII 180
>gi|265984155|ref|ZP_06096890.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306838152|ref|ZP_07471008.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella sp.
NF 2653]
gi|264662747|gb|EEZ33008.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306406742|gb|EFM62965.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella sp.
NF 2653]
Length = 196
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 19 SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFV 78
+S DP+ V+ + GD+ P +AP+ V I KLVR G YN F RV GF+
Sbjct: 24 ASVADPE---NTVILKLKDGDVALELRPDLAPKHVAQIKKLVREGAYNGVAFHRVIPGFM 80
Query: 79 AQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFS 134
AQ DV G + RV + + EFS VRG + M R +PNSA S F
Sbjct: 81 AQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPNSANSQFF 140
Query: 135 ILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
I+ D P L+GQY V GKV G + + K++
Sbjct: 141 IMFDDGPFLNGQYTVVGKVVSGMDAVDKIK 170
>gi|89894587|ref|YP_518074.1| hypothetical protein DSY1841 [Desulfitobacterium hafniense Y51]
gi|89334035|dbj|BAE83630.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 153
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99
I+ YP VAP+TV + LV G Y+ F RV GF+ Q D G +
Sbjct: 7 IKIELYPDVAPETVKNFVSLVEKGFYDGIIFHRVIPGFMIQGGDPQGTGMGGCG--YSIN 64
Query: 100 AEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDET 159
E T G +++KH RG++SM R ++PNSA S F ++ D+PHLDGQYA FG++ +G E
Sbjct: 65 GEFTANGFPNNLKHERGVISMARTANPNSAGSQFFLMHADSPHLDGQYASFGRIIEGIEE 124
Query: 160 LRKL 163
+ ++
Sbjct: 125 VDRI 128
>gi|291545789|emb|CBL18897.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Ruminococcus sp. SR1/5]
Length = 299
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG+I+ AP TV + KLV+ Y+ F R+ GF+ Q D G +
Sbjct: 146 DYGEIDVELDADTAPITVTNFVKLVQDNFYDGLTFHRIIDGFMIQGGDPNGDGTGG---- 201
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
AE T+ GEFS D+ HVRG +SM R +DP+SA+S F I+ D+ HLDG YA
Sbjct: 202 ----AEDTIKGEFSSNGVKNDISHVRGTISMARSTDPDSASSQFFIVQSDSTHLDGDYAA 257
Query: 150 FGKVTKGDETLRKL--EGLPTRKEGIFV 175
FG VT G + + ++ + PT G
Sbjct: 258 FGHVTSGMDIVDQICKDAKPTDGNGTIA 285
>gi|254293787|ref|YP_003059810.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Hirschia
baltica ATCC 49814]
gi|254042318|gb|ACT59113.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Hirschia
baltica ATCC 49814]
Length = 150
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+VF GD++ +AP V I +LV G Y+ F RV GFVAQ GG
Sbjct: 8 LVFTLAEGDVKINLRSDLAPNHVARIKELVSEGFYDGLTFHRVIDGFVAQ-----GG--C 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P +K + EF+ KHVRG SM R DPNSA S F I L D +LDGQY V+
Sbjct: 61 PQGNGMGGSGKK-IKAEFNSGKHVRGACSMARAQDPNSADSQFYICLDDVSYLDGQYTVW 119
Query: 151 GKVTKGDETLRKL-EGLPTRKEGIFV 175
G+VT+G E + L +G P R+ G +
Sbjct: 120 GEVTEGMENVDALPKGEPPREPGKII 145
>gi|197104865|ref|YP_002130242.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Phenylobacterium zucineum HLK1]
gi|196478285|gb|ACG77813.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Phenylobacterium zucineum HLK1]
Length = 153
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G + P +AP+ V+ I +L R G Y+ F RV GF+AQ D G S
Sbjct: 7 LIMELESGPVTIKLRPDLAPKHVERIKELAREGFYDGVVFHRVIPGFMAQGGDPTGTGSG 66
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ + EFS HVRG+ SM R +PNSA S F I DA LDGQY V+
Sbjct: 67 -------GSKKPNLPAEFSREPHVRGVCSMARTPNPNSANSQFFICFDDATFLDGQYTVW 119
Query: 151 GKVTKGDETLRKL-EGLPTRKEGIFV 175
G+VT+G E + L +G P R+ G V
Sbjct: 120 GEVTEGMEHVDALPKGEPPREPGKIV 145
>gi|431794007|ref|YP_007220912.1| peptidyl-prolyl cis-trans isomerase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784233|gb|AGA69516.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 169
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N I+ YP +AP+TV + LV G Y+ F RV GF+ Q D G
Sbjct: 19 NGNQIKIELYPEIAPETVKNFVALVEKGFYDGIIFHRVIPGFMIQGGDPQGTGMGGCG-- 76
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++ E T G +D+KH RG++SM R ++PNSA S F ++ ++PHLDGQYA FG++ +
Sbjct: 77 YSIKGEFTSNGFPNDLKHDRGVISMARTANPNSAGSQFFLMHANSPHLDGQYASFGRIIE 136
Query: 156 GDETLRKL 163
G E + ++
Sbjct: 137 GIEEVDRI 144
>gi|386874761|ref|ZP_10116987.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Candidatus
Nitrosopumilus salaria BD31]
gi|386807384|gb|EIJ66777.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Candidatus
Nitrosopumilus salaria BD31]
Length = 502
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 5 IRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
+ I L L++ +Q D +L VV +TN G I F+P AP V + KL G
Sbjct: 8 LTISLFLVSFGNYTFAQSDDKL----VVLETNLGVIVIEFFPDDAPNHVANFIKLTESGF 63
Query: 65 YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEA----EKTVVGEFSDVKHVRGILSM 120
Y+ F R+ GF+ Q GG +N E+ V EF+ +KH RGI+SM
Sbjct: 64 YDGTIFHRIIPGFMIQ-----GGDPNTINGDPSTWGIGGPEERVNAEFNTIKHNRGIVSM 118
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD--ETLRKLEGLPTRKEGIFVMPT 178
R +DPNS S F I+ D+ LDGQY VFG++ + +TL K+ + T + + P
Sbjct: 119 ARSADPNSGGSQFFIVHKDSNFLDGQYTVFGRIVTEESFQTLDKIAAVETGDKDNPIDPE 178
Query: 179 ERITIHSSYYYDTE----MEICEKERS 201
+ I ++ +E +E+ + ER+
Sbjct: 179 QVRIIKATVVNRSEVTDILELPDPERT 205
>gi|357384492|ref|YP_004899216.1| peptidyl-prolyl cis-trans isomerase [Pelagibacterium halotolerans
B2]
gi|351593129|gb|AEQ51466.1| peptidyl-prolyl cis-trans isomerase [Pelagibacterium halotolerans
B2]
Length = 204
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VGGRSAPMN 93
GD+ P +AP+ V I +L G Y+ F RV GF+AQ D +GG P
Sbjct: 62 GDVTIALRPDLAPEHVARITELANSGFYDGLKFHRVIDGFMAQTGDPQGTGMGGSDLP-- 119
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ EFS+ VRG L M R ++PNSA S F I+ D+PHL+GQY +FG V
Sbjct: 120 ---------DLAAEFSNESFVRGTLGMARSANPNSANSQFFIVTADSPHLNGQYTLFGNV 170
Query: 154 TKGDETLRKLEGLPTRKEGIFVMPTERITI 183
G + + LE P G P +++
Sbjct: 171 ISGMDLVDGLEKGPASANGAVSNPDIMVSL 200
>gi|160879404|ref|YP_001558372.1| peptidyl-prolyl isomerase [Clostridium phytofermentans ISDg]
gi|160428070|gb|ABX41633.1| Peptidylprolyl isomerase [Clostridium phytofermentans ISDg]
Length = 174
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ GD I+ YP +AP +V++ L++ G Y+ F RV KGF+ Q G G
Sbjct: 8 VTFEMENGDVIKAELYPEIAPISVNNFVSLIKKGYYDGLIFHRVIKGFMIQGGCPEGSGM 67
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ A+ G +D+KH G+LSM R PNSA S F I+ ++PHLDG YA
Sbjct: 68 GGPGYSIRGEFAQN---GFINDLKHSEGVLSMARSMRPNSAGSQFFIMHKNSPHLDGAYA 124
Query: 149 VFGKVTKGDETLRKL 163
FGKVT+G + + K+
Sbjct: 125 AFGKVTEGMDIVNKI 139
>gi|359409951|ref|ZP_09202416.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
sp. DL-VIII]
gi|357168835|gb|EHI97009.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Clostridium
sp. DL-VIII]
Length = 174
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G I+ YP +AP TV + L+ G Y+ F RV GF+ Q G G P
Sbjct: 12 NGGVIKAELYPEIAPNTVSNFVDLINRGFYDGLIFHRVIPGFMIQGGCPEGTGMGGPG-- 69
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E T G + +KH +G+LSM R P+SA S F I++ DAPHLDGQYA FGKV
Sbjct: 70 -YSIKGEFTSNGFKNTLKHTKGVLSMARAMHPDSAGSQFFIMVADAPHLDGQYASFGKVI 128
Query: 155 KGDETLRKL 163
+G E K+
Sbjct: 129 EGIEVADKI 137
>gi|170748567|ref|YP_001754827.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Methylobacterium radiotolerans JCM 2831]
gi|170655089|gb|ACB24144.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Methylobacterium radiotolerans JCM 2831]
Length = 182
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VG 86
V QT G I P +AP+ V I LV G YN F RV GF+AQ D G
Sbjct: 28 VYLQTKDGRITIELRPDLAPKHVKQIKTLVSQGFYNGLKFHRVIDGFMAQTGDPKGNGTG 87
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G S P + AE T +F RG + M R DPNSA S F I LGDAP L+GQ
Sbjct: 88 GSSLP-----NIPAEFTQAAQFR-----RGTVGMARSQDPNSANSQFFICLGDAPFLNGQ 137
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI 181
Y + G VT G + L K++ G V ++I
Sbjct: 138 YTIVGNVTDGLDVLDKIKKAAPGAPGGAVQDPDKI 172
>gi|257440045|ref|ZP_05615800.1| peptidyl-prolyl cis-trans isomerase A [Faecalibacterium prausnitzii
A2-165]
gi|257197397|gb|EEU95681.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Faecalibacterium prausnitzii A2-165]
Length = 158
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G I+ VAP T ++ KLV G YN F RV GF+ Q +G G P
Sbjct: 10 GIIDIELNEEVAPITCENFKKLVSEGFYNGLTFHRVIPGFMIQGGCPLGNGTGGPG---W 66
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
++ E G + +KH RG++SM R +PNSA S F I+ DAPHLDGQYA FGKV G
Sbjct: 67 NIKGEFAANGVNNPIKHTRGVISMARSMNPNSAGSQFFIMHKDAPHLDGQYAAFGKVVAG 126
Query: 157 DETLRKLEGLPT 168
E + K+ + T
Sbjct: 127 MEVVDKIASVRT 138
>gi|163868578|ref|YP_001609787.1| peptidyl prolyl cis-trans isomerase [Bartonella tribocorum CIP
105476]
gi|161018234|emb|CAK01792.1| peptidyl prolyl cis-trans isomerase [Bartonella tribocorum CIP
105476]
Length = 170
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
+V +T G + + +AP V I +LVR G Y+ F RV GF+AQ DV G +
Sbjct: 11 LVLETTKGRVVIELFADLAPCHVARIKELVREGAYDNVIFHRVIDGFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ + R + + EFS++ H RG +SM R +PNSA S F I DAP LD
Sbjct: 71 SEEFNLSRAGMGGSEKPNLTAEFSNLSHKRGTVSMARSQNPNSANSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGQVVEGMENVDKIK 149
>gi|319405590|emb|CBI79210.1| peptidyl prolyl cis-trans isomerase [Bartonella sp. AR 15-3]
Length = 170
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + + +AP V I +LVR G Y+ F RV F+AQ DV G ++
Sbjct: 11 LILETTKGKVVIELFADLAPAHVIRIKELVREGAYDDVVFHRVIDDFMAQTGDVQFGKKN 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ RV + + EFS++ H RG +SM R +PNSA S F I L DAP LD
Sbjct: 71 GEKFNLSRVGMGGSDKPDLKAEFSNLPHKRGTVSMARSQNPNSANSQFFICLADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V KG E + K++
Sbjct: 131 QYSIWGQVLKGMENIDKIK 149
>gi|339441910|ref|YP_004707915.1| hypothetical protein CXIVA_08460 [Clostridium sp. SY8519]
gi|338901311|dbj|BAK46813.1| hypothetical protein CXIVA_08460 [Clostridium sp. SY8519]
Length = 173
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP +AP TV++ L+R G Y+ F RV GF+ Q D G G
Sbjct: 7 VTIEMENGDIIKAELYPDIAPNTVNNFISLIRRGFYDGVIFHRVIPGFMIQGGDPEGTGM 66
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E T G +D+ H G+LSM R PNSA S F I+ APHLDG+YA
Sbjct: 67 GGPGYSIR---GEFTHNGFQNDLAHDPGVLSMARTMAPNSAGSQFFIMHAKAPHLDGEYA 123
Query: 149 VFGKVTKG 156
FGKVT+G
Sbjct: 124 AFGKVTEG 131
>gi|158319934|ref|YP_001512441.1| peptidyl-prolyl isomerase [Alkaliphilus oremlandii OhILAs]
gi|158140133|gb|ABW18445.1| Peptidylprolyl isomerase [Alkaliphilus oremlandii OhILAs]
Length = 172
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ L+ G YN F RV GF+ Q D + ++ E T
Sbjct: 20 LYPEIAPNTVNNFISLINKGYYNGVIFHRVIPGFMIQGGDPD--GTGTGGPGYSIKGEFT 77
Query: 104 VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
G +D+KH +G+LSM R + PNSA S F I++ ++PHLDGQYA FGKV +G E ++
Sbjct: 78 GNGFKNDLKHTKGVLSMARTAVPNSAGSQFFIMVENSPHLDGQYASFGKVIEGIEVADEI 137
>gi|307244660|ref|ZP_07526764.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Peptostreptococcus stomatis DSM 17678]
gi|306492041|gb|EFM64090.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Peptostreptococcus stomatis DSM 17678]
Length = 174
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G I+ P++AP +V++ L++ G Y+ F RV GF+ Q G G P
Sbjct: 14 NGGVIKLELLPNIAPNSVNNFISLIKKGYYDGLIFHRVISGFMIQGGCPQGSGMGGPG-- 71
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
+ E T+ G +++KH RG++SM R +PNSA S F I+ D+PHLDGQYA FG+V
Sbjct: 72 -YTIAGEFTMNGFTNNLKHERGVISMARAMNPNSAGSQFFIMHQDSPHLDGQYASFGRVL 130
Query: 155 KGDETLRKLEGLPT 168
+G + + ++ G T
Sbjct: 131 EGMDIVDQIAGTET 144
>gi|227872650|ref|ZP_03990980.1| peptidylprolyl isomerase [Oribacterium sinus F0268]
gi|227841464|gb|EEJ51764.1| peptidylprolyl isomerase [Oribacterium sinus F0268]
Length = 161
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 77/145 (53%), Gaps = 7/145 (4%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I YP AP TV++ LV+ G YN F R+ GF+ Q D G G P +
Sbjct: 16 IRLELYPETAPITVENFLDLVKKGFYNGLTFHRIISGFMIQGGDPDGNGMGGPG---YSI 72
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E G + +KH +G++SM R DPNSA S F I+ APHLDGQYA FGKV +G +
Sbjct: 73 KGEFKSNGVDNPLKHEKGVISMARSMDPNSAGSQFFIMHEAAPHLDGQYAAFGKVIEGLD 132
Query: 159 TLRKLEGLPTRKEGIFVMPTERITI 183
+ ++ + T G P E++ +
Sbjct: 133 VVDEIASVET---GFQDAPVEKVIM 154
>gi|319408723|emb|CBI82380.1| peptidyl prolyl cis-trans isomerase [Bartonella schoenbuchensis R1]
Length = 170
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G++ + +AP V I +LVR G Y+ F RV GF+AQ DV G +
Sbjct: 11 LILETTKGNVVIELFADLAPGHVVRIKELVREGAYDNVVFHRVIDGFMAQTGDVKFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ + RV + + EFS++ H RG +SM R +PNSA S F I DAP LD
Sbjct: 71 SEKFDSSRVGMGGSDKPDLKAEFSNISHKRGTVSMARSQNPNSANSQFFICFEDAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGQVMEGMENVDKIK 149
>gi|336425557|ref|ZP_08605578.1| hypothetical protein HMPREF0994_01584 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336012132|gb|EGN42058.1| hypothetical protein HMPREF0994_01584 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 173
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP +V++ L+ Y+ F RV KGF+ Q D G G P ++ E
Sbjct: 21 LYPEIAPVSVNNFISLINKKFYDGLIFHRVIKGFMIQGGDPDGNGTGGPG---YSIKGEF 77
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
+ G +D++H G+LSM R PNSA S F I+ +APHLDG YA FGKVT+G E + K
Sbjct: 78 SQNGVKNDLQHTEGVLSMARSMAPNSAGSQFFIMHKNAPHLDGSYAAFGKVTEGMENVNK 137
Query: 163 L 163
+
Sbjct: 138 I 138
>gi|161527519|ref|YP_001581345.1| peptidyl-prolyl isomerase [Nitrosopumilus maritimus SCM1]
gi|160338820|gb|ABX11907.1| Peptidylprolyl isomerase [Nitrosopumilus maritimus SCM1]
Length = 509
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 14/170 (8%)
Query: 7 IFLTLITLIGTASSQEDP-QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
+F+ ++ S + +P ++ V+ +T+ G+I GF+P+ AP+ V++ KL G Y
Sbjct: 13 LFMGIVNQTTAQSVEVNPIKIMDPVVIIETSLGNITIGFFPNDAPKHVENFLKLSTSGFY 72
Query: 66 NTNHFFRVDKGFVAQVAD--VVGGRSAPMN---EVQRVEAEKTVVGEFSDVKHVRGILSM 120
+ F R+ GF+ Q D + G S+ +R++AE F+++KH RGI+SM
Sbjct: 73 DGTLFHRIIPGFMIQGGDPNTIDGDSSTWGTGGPDERLDAE------FNNIKHNRGIVSM 126
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD--ETLRKLEGLPT 168
R +DPNS S F I+ ++ LD QY VFG++ + ETL K+ + T
Sbjct: 127 ARSADPNSGGSQFFIVHQNSNFLDEQYTVFGRIITEESFETLDKIASVST 176
>gi|239831892|ref|ZP_04680221.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Ochrobactrum
intermedium LMG 3301]
gi|444308473|ref|ZP_21144118.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
intermedium M86]
gi|239824159|gb|EEQ95727.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Ochrobactrum
intermedium LMG 3301]
gi|443488056|gb|ELT50813.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
intermedium M86]
Length = 168
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
+V +T G++ YP +AP V I +L R G Y+ F RV GF+AQ DV G++
Sbjct: 10 LVLETTKGNVVLELYPDLAPDHVARIKELAREGAYDGVVFHRVIDGFMAQTGDVKFGKTG 69
Query: 90 --------APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
A M + + + EFS+ H RG SM R ++PNSA S F I DAP
Sbjct: 70 GAHFNGSRAGMGGSDKPD----LKAEFSNTPHKRGTASMARSANPNSANSQFFICFADAP 125
Query: 142 HLDGQYAVFGKVTKGDETLRKLE 164
LD QY+V+G+V +G + + K++
Sbjct: 126 WLDRQYSVWGQVIEGMDNVDKIK 148
>gi|403069429|ref|ZP_10910761.1| peptidyl-prolyl cis-trans isomerase-like 1 [Oceanobacillus sp.
Ndiop]
Length = 220
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 14/126 (11%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP VAP TV + L+ G Y+ F RV F+ Q D G + + T
Sbjct: 68 MYPDVAPNTVANFISLIEDGYYDGQIFHRVIPDFMIQGGDPNGNGTG--------DPGYT 119
Query: 104 VVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ GEFS D+ H RGI+SM R S P+SA S F I++ D+PHLDG+YA FG+VT+G
Sbjct: 120 IPGEFSSNGFENDLIHERGIISMARSSHPDSAGSQFFIMVEDSPHLDGEYAAFGRVTEGM 179
Query: 158 ETLRKL 163
E + +
Sbjct: 180 EAVDGI 185
>gi|410727840|ref|ZP_11366035.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Clostridium sp. Maddingley MBC34-26]
gi|410597838|gb|EKQ52446.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Clostridium sp. Maddingley MBC34-26]
Length = 174
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G I+ YP +AP TV++ L+ G Y+ F RV F+ Q G G P
Sbjct: 12 NGGVIKAELYPEIAPNTVNNFVDLINRGFYDGLIFHRVIPNFMIQGGCPEGSGMGGPG-- 69
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E T G + +KH RG+LSM R P+SA S F I++ DAPHLDGQYA FGKV
Sbjct: 70 -YSIKGEFTSNGFNNTLKHSRGVLSMARAMHPDSAGSQFFIMVADAPHLDGQYASFGKVI 128
Query: 155 KGDETLRKL 163
+G E K+
Sbjct: 129 EGMEVADKI 137
>gi|398353852|ref|YP_006399316.1| peptidyl-prolyl cis-trans isomerase Ppi [Sinorhizobium fredii USDA
257]
gi|390129178|gb|AFL52559.1| putative peptidyl-prolyl cis-trans isomerase Ppi [Sinorhizobium
fredii USDA 257]
Length = 169
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +L R G Y+ F RV + F+AQ DV G+S
Sbjct: 11 IIMETTKGRVVIELRPDVAPGHVARIKELSREGAYDGVVFHRVIEDFMAQTGDVQYGKSG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS+V HVRG SM R PNSA S F I DAP L+
Sbjct: 71 GEHFDPARAGMGGSSKPDLKAEFSEVAHVRGTCSMARSQMPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY+V+G+V +G E + +++ G P R
Sbjct: 131 QYSVWGQVIEGMENIDQIKRGEPVR 155
>gi|390455192|ref|ZP_10240720.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)
[Paenibacillus peoriae KCTC 3763]
Length = 225
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV++ LV+ G YN F RV GF+ Q D G G P +
Sbjct: 68 IKLELYPEVAPNTVNNFISLVQKGAYNGTIFHRVIPGFMIQGGDPKGNGTGGPG---YSI 124
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E G + +KH RG+LSM R + +SA S F I++ +A +LDGQYA FGKVT G E
Sbjct: 125 KGEFKSNGFNNTLKHTRGVLSMARSAALDSAGSQFFIMVANADYLDGQYAAFGKVTSGME 184
Query: 159 TL 160
+
Sbjct: 185 VV 186
>gi|240850762|ref|YP_002972162.1| peptidyl prolyl cis-trans isomerase B, cyclophilin type [Bartonella
grahamii as4aup]
gi|240267885|gb|ACS51473.1| peptidyl prolyl cis-trans isomerase B, cyclophilin type [Bartonella
grahamii as4aup]
Length = 170
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + +AP V I +LVR G Y+ F RV GF+AQ DV G +
Sbjct: 11 LILETTKGRVVIELLADLAPCHVARIKELVREGAYDNVIFHRVIDGFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRVE---AEK-TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ + R AEK + EFS++ H RG +SM R +PNSA S F I DAP LD
Sbjct: 71 SEKFNLSRAGMGGAEKPNLTAEFSNLSHKRGTVSMARSQNPNSANSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGQVVEGMENVDKIK 149
>gi|395786445|ref|ZP_10466172.1| hypothetical protein ME5_01490 [Bartonella tamiae Th239]
gi|423716662|ref|ZP_17690852.1| hypothetical protein MEG_00392 [Bartonella tamiae Th307]
gi|395422743|gb|EJF88939.1| hypothetical protein ME5_01490 [Bartonella tamiae Th239]
gi|395428736|gb|EJF94811.1| hypothetical protein MEG_00392 [Bartonella tamiae Th307]
Length = 171
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
++ +T G++ P +AP+ V + +LVR G Y+ F RV GF+AQ DV G+
Sbjct: 11 LILETTKGEVIIELLPDLAPEHVKRVKELVREGAYDNVVFHRVIDGFMAQTGDVEFGKKD 70
Query: 90 ----APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS++ H RG LSM R +P+SA S F I DAP LD
Sbjct: 71 GKNFNPSRAGMGGSDKPDLKSEFSNIPHKRGTLSMARSQNPHSANSQFFICFEDAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V G + + KL+
Sbjct: 131 QYSVWGQVIDGMDYVDKLK 149
>gi|406706230|ref|YP_006756583.1| cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
[alpha proteobacterium HIMB5]
gi|406652006|gb|AFS47406.1| cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
[alpha proteobacterium HIMB5]
Length = 186
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + GD++ +P VAP V I +L G Y+ F RV GF+AQ DV G S+
Sbjct: 26 MILKLKDGDVKIELFPDVAPNHVKRIKELADSGKYDGVVFHRVIDGFMAQTGDVQFGNSS 85
Query: 91 PMN-EVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
N +++R + + EF+ + H RG LSM R DPNSA S F I AP LD
Sbjct: 86 NDNFDLRRAGMGGSDLPDLKQEFNSLPHDRGTLSMARAQDPNSANSQFFICFKPAPFLDR 145
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
QY VFGKV +G E + ++ + G P + I+ S
Sbjct: 146 QYTVFGKVIEGMEHVDSIKRGDSNNNGAVDDPDKIISFKS 185
>gi|300870162|ref|YP_003785033.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli
95/1000]
gi|404475503|ref|YP_006706934.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli B2904]
gi|431806792|ref|YP_007233690.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli
P43/6/78]
gi|434382602|ref|YP_006704385.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli WesB]
gi|300687861|gb|ADK30532.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli
95/1000]
gi|404431251|emb|CCG57297.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli WesB]
gi|404436992|gb|AFR70186.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli B2904]
gi|430780151|gb|AGA65435.1| peptidyl-prolyl cis-trans isomerase [Brachyspira pilosicoli
P43/6/78]
Length = 161
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 67/137 (48%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+ +T+YG IE FYP AP+ V+ I KL G Y+ F RV F+ Q D
Sbjct: 3 HLFIETDYGTIEIEFYPDKAPKHVEAIKKLANEGFYDGIRFHRVIPNFMIQGGDPTSKDP 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ + EF+DV H RGI SM R P+SA S F I + D P LDGQY V
Sbjct: 63 TKRHLHGTGGPGFNIEAEFNDVSHKRGICSMARSQHPDSAGSQFFICVADCPFLDGQYTV 122
Query: 150 FGKVTKGDETLRKLEGL 166
+G V G + K+ L
Sbjct: 123 WGNVVNGMDVADKIVAL 139
>gi|17987171|ref|NP_539805.1| peptidyl-prolyl cis-trans isomerase A [Brucella melitensis bv. 1
str. 16M]
gi|225627568|ref|ZP_03785605.1| peptidyl-prolyl cis-trans isomerase A [Brucella ceti str. Cudo]
gi|237815516|ref|ZP_04594513.1| peptidyl-prolyl cis-trans isomerase A [Brucella abortus str. 2308
A]
gi|17982838|gb|AAL52069.1| peptidyl-prolyl cis-trans isomerase a [Brucella melitensis bv. 1
str. 16M]
gi|225617573|gb|EEH14618.1| peptidyl-prolyl cis-trans isomerase A [Brucella ceti str. Cudo]
gi|237788814|gb|EEP63025.1| peptidyl-prolyl cis-trans isomerase A [Brucella abortus str. 2308
A]
gi|289467879|gb|ADC95624.1| peptidyl-prolyl cis-trans isomerase A [Brucella melitensis bv. 1
str. M5]
Length = 176
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 13/143 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
+V +T G++ YP +AP V I +L R G Y+ F RV GF+AQ DV G+S
Sbjct: 18 LVLETTKGNVVLELYPDLAPGHVARIKELAREGAYDGVVFHRVIDGFMAQTGDVKFGKSG 77
Query: 90 --------APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
A M + + + EFS+ H RG SM R ++PNSA S F I DAP
Sbjct: 78 GAHFDGSRAGMGGSDKAD----LKAEFSNTPHKRGTASMARSANPNSANSQFFICFADAP 133
Query: 142 HLDGQYAVFGKVTKGDETLRKLE 164
LD QY V+G+V +G + + +++
Sbjct: 134 WLDRQYTVWGQVIEGMDNVDQIK 156
>gi|319407153|emb|CBI80791.1| peptidyl prolyl cis-trans isomerase [Bartonella sp. 1-1C]
Length = 170
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
+P+ ++ +T G++ + +AP V I +LVR G Y+ F RV F+AQ
Sbjct: 3 EPKDPENTLILETTKGEVVIELFADLAPAHVARIKELVREGAYDNVVFHRVIDDFMAQTG 62
Query: 83 DV-VGGRSAPMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
DV G ++ + RV + + EFS++ H RG +SM R +PNSA S F I L
Sbjct: 63 DVQFGKKNGEKFNLSRVGMGGSDKPDLKAEFSNLPHKRGTVSMARSQNPNSANSQFFICL 122
Query: 138 GDAPHLDGQYAVFGKVTKGDETLRKLE 164
DAP L+ QY+++G+V KG E + +++
Sbjct: 123 ADAPWLNRQYSIWGQVLKGMENIDQIK 149
>gi|166033554|ref|ZP_02236383.1| hypothetical protein DORFOR_03280 [Dorea formicigenerans ATCC
27755]
gi|346309040|ref|ZP_08851143.1| hypothetical protein HMPREF9457_02852 [Dorea formicigenerans
4_6_53AFAA]
gi|166026739|gb|EDR45496.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Dorea
formicigenerans ATCC 27755]
gi|345901284|gb|EGX71087.1| hypothetical protein HMPREF9457_02852 [Dorea formicigenerans
4_6_53AFAA]
Length = 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 77/141 (54%), Gaps = 17/141 (12%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ GDI + YP +AP TV++ LV+ G Y+ F RV +GF+ Q G G
Sbjct: 6 VTFEMENGDIMKAELYPEIAPNTVNNFISLVQNGFYDGLIFHRVIRGFMIQGGCPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
P T+ GEFS D++H G+LSM R P+SA S F I+ ++PH
Sbjct: 66 GGP---------GYTIKGEFSQNGFANDLRHTEGVLSMARAMHPDSAGSQFFIMHKNSPH 116
Query: 143 LDGQYAVFGKVTKGDETLRKL 163
LDG YA FGK+T+G + + K+
Sbjct: 117 LDGAYAAFGKITEGMDIVNKI 137
>gi|295689994|ref|YP_003593687.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Caulobacter
segnis ATCC 21756]
gi|295431897|gb|ADG11069.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Caulobacter
segnis ATCC 21756]
Length = 155
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
++ G + P +AP V+ I +LVR G Y+ F RV GF+AQ D G GR
Sbjct: 9 LILTLETGPVTIQLRPDLAPGHVERIKELVREGFYDGVVFHRVIPGFMAQGGDPSGTGRG 68
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ + EF+ HVRG+ SM R DPNSA S F I+ DA LDGQY V
Sbjct: 69 G--------SDKPDLKAEFNKEPHVRGVCSMARTPDPNSANSQFFIVFDDATFLDGQYTV 120
Query: 150 FGKVTKGDETLRKL-EGLPTRKEGIFV 175
+G+VT+G E + L +G P ++ G V
Sbjct: 121 WGQVTEGMENVDALPKGEPPKEPGKIV 147
>gi|23501971|ref|NP_698098.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella suis
1330]
gi|62290008|ref|YP_221801.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
abortus bv. 1 str. 9-941]
gi|82699936|ref|YP_414510.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis biovar
Abortus 2308]
gi|148559618|ref|YP_001259017.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Brucella ovis
ATCC 25840]
gi|161619044|ref|YP_001592931.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
canis ATCC 23365]
gi|163843360|ref|YP_001627764.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella suis
ATCC 23445]
gi|189024249|ref|YP_001935017.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
abortus S19]
gi|225852595|ref|YP_002732828.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
melitensis ATCC 23457]
gi|256263911|ref|ZP_05466443.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 2 str.
63/9]
gi|256369520|ref|YP_003107030.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
microti CCM 4915]
gi|260546563|ref|ZP_05822302.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus NCTC 8038]
gi|260565645|ref|ZP_05836129.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str.
16M]
gi|260566369|ref|ZP_05836839.1| peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 4 str. 40]
gi|260754836|ref|ZP_05867184.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 6 str. 870]
gi|260758053|ref|ZP_05870401.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 4 str. 292]
gi|260883848|ref|ZP_05895462.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 9 str. C68]
gi|261214087|ref|ZP_05928368.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 3 str. Tulya]
gi|261222260|ref|ZP_05936541.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella ceti
B1/94]
gi|261314183|ref|ZP_05953380.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
pinnipedialis M163/99/10]
gi|261317728|ref|ZP_05956925.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
pinnipedialis B2/94]
gi|261752399|ref|ZP_05996108.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella suis
bv. 5 str. 513]
gi|261755059|ref|ZP_05998768.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella suis
bv. 3 str. 686]
gi|261758284|ref|ZP_06001993.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99]
gi|265984154|ref|ZP_06096889.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella sp.
83/13]
gi|265988759|ref|ZP_06101316.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
pinnipedialis M292/94/1]
gi|265991174|ref|ZP_06103731.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
melitensis bv. 1 str. Rev.1]
gi|265995010|ref|ZP_06107567.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
melitensis bv. 3 str. Ether]
gi|265998225|ref|ZP_06110782.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella ceti
M490/95/1]
gi|294852433|ref|ZP_06793106.1| peptidylprolyl isomerase [Brucella sp. NVSL 07-0026]
gi|297248410|ref|ZP_06932128.1| peptidylprolyl isomerase [Brucella abortus bv. 5 str. B3196]
gi|306838151|ref|ZP_07471007.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella sp.
NF 2653]
gi|306841820|ref|ZP_07474503.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella sp.
BO2]
gi|306843961|ref|ZP_07476556.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
inopinata BO1]
gi|340790712|ref|YP_004756177.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
pinnipedialis B2/94]
gi|376273174|ref|YP_005151752.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
abortus A13334]
gi|376276293|ref|YP_005116732.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
canis HSK A52141]
gi|376280765|ref|YP_005154771.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella suis
VBI22]
gi|384211460|ref|YP_005600542.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
melitensis M5-90]
gi|384224759|ref|YP_005615923.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella suis
1330]
gi|384408569|ref|YP_005597190.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Brucella
melitensis M28]
gi|384445154|ref|YP_005603873.1| peptidyl-prolyl cis-trans isomerase A [Brucella melitensis NI]
gi|423166803|ref|ZP_17153506.1| hypothetical protein M17_00493 [Brucella abortus bv. 1 str. NI435a]
gi|423170823|ref|ZP_17157498.1| hypothetical protein M19_01356 [Brucella abortus bv. 1 str. NI474]
gi|423173095|ref|ZP_17159766.1| hypothetical protein M1A_00493 [Brucella abortus bv. 1 str. NI486]
gi|423178212|ref|ZP_17164856.1| hypothetical protein M1E_02452 [Brucella abortus bv. 1 str. NI488]
gi|423180253|ref|ZP_17166894.1| hypothetical protein M1G_01353 [Brucella abortus bv. 1 str. NI010]
gi|423183385|ref|ZP_17170022.1| hypothetical protein M1I_01354 [Brucella abortus bv. 1 str. NI016]
gi|423185675|ref|ZP_17172289.1| hypothetical protein M1K_00493 [Brucella abortus bv. 1 str. NI021]
gi|423188811|ref|ZP_17175421.1| hypothetical protein M1M_00493 [Brucella abortus bv. 1 str. NI259]
gi|23347919|gb|AAN30013.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
suis 1330]
gi|62196140|gb|AAX74440.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
abortus bv. 1 str. 9-941]
gi|82616037|emb|CAJ11073.1| ATP/GTP-binding site motif A (P-loop):Peptidyl-prolyl cis-trans
isomerase, cyclophilin type [Brucella melitensis biovar
Abortus 2308]
gi|148370875|gb|ABQ60854.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
ovis ATCC 25840]
gi|161335855|gb|ABX62160.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
canis ATCC 23365]
gi|163674083|gb|ABY38194.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella suis
ATCC 23445]
gi|189019821|gb|ACD72543.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Brucella
abortus S19]
gi|225640960|gb|ACO00874.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
melitensis ATCC 23457]
gi|255999682|gb|ACU48081.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
microti CCM 4915]
gi|260095613|gb|EEW79490.1| peptidyl-prolyl cis-trans isomerase [Brucella abortus NCTC 8038]
gi|260151713|gb|EEW86807.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 1 str.
16M]
gi|260155887|gb|EEW90967.1| peptidyl-prolyl cis-trans isomerase [Brucella suis bv. 4 str. 40]
gi|260668371|gb|EEX55311.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 4 str. 292]
gi|260674944|gb|EEX61765.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 6 str. 870]
gi|260873376|gb|EEX80445.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 9 str. C68]
gi|260915694|gb|EEX82555.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus bv. 3 str. Tulya]
gi|260920844|gb|EEX87497.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella ceti
B1/94]
gi|261296951|gb|EEY00448.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
pinnipedialis B2/94]
gi|261303209|gb|EEY06706.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
pinnipedialis M163/99/10]
gi|261738268|gb|EEY26264.1| peptidyl-prolyl cis-trans isomerase [Brucella sp. F5/99]
gi|261742152|gb|EEY30078.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella suis
bv. 5 str. 513]
gi|261744812|gb|EEY32738.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella suis
bv. 3 str. 686]
gi|262552693|gb|EEZ08683.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella ceti
M490/95/1]
gi|262766123|gb|EEZ11912.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
melitensis bv. 3 str. Ether]
gi|263001958|gb|EEZ14533.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
melitensis bv. 1 str. Rev.1]
gi|263094044|gb|EEZ17978.1| peptidyl-prolyl cis-trans isomerase [Brucella melitensis bv. 2 str.
63/9]
gi|264660956|gb|EEZ31217.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
pinnipedialis M292/94/1]
gi|264662746|gb|EEZ33007.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella sp.
83/13]
gi|294821022|gb|EFG38021.1| peptidylprolyl isomerase [Brucella sp. NVSL 07-0026]
gi|297175579|gb|EFH34926.1| peptidylprolyl isomerase [Brucella abortus bv. 5 str. B3196]
gi|306275716|gb|EFM57440.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
inopinata BO1]
gi|306288101|gb|EFM59495.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella sp.
BO2]
gi|306406741|gb|EFM62964.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella sp.
NF 2653]
gi|326409116|gb|ADZ66181.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Brucella
melitensis M28]
gi|326538823|gb|ADZ87038.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
melitensis M5-90]
gi|340559171|gb|AEK54409.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
pinnipedialis B2/94]
gi|343382939|gb|AEM18431.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
suis 1330]
gi|349743145|gb|AEQ08688.1| peptidyl-prolyl cis-trans isomerase A [Brucella melitensis NI]
gi|358258364|gb|AEU06099.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
suis VBI22]
gi|363400780|gb|AEW17750.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
abortus A13334]
gi|363404860|gb|AEW15155.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
canis HSK A52141]
gi|374539401|gb|EHR10905.1| hypothetical protein M19_01356 [Brucella abortus bv. 1 str. NI474]
gi|374543034|gb|EHR14518.1| hypothetical protein M17_00493 [Brucella abortus bv. 1 str. NI435a]
gi|374543650|gb|EHR15132.1| hypothetical protein M1A_00493 [Brucella abortus bv. 1 str. NI486]
gi|374545451|gb|EHR16912.1| hypothetical protein M1E_02452 [Brucella abortus bv. 1 str. NI488]
gi|374548817|gb|EHR20264.1| hypothetical protein M1G_01353 [Brucella abortus bv. 1 str. NI010]
gi|374549448|gb|EHR20891.1| hypothetical protein M1I_01354 [Brucella abortus bv. 1 str. NI016]
gi|374558469|gb|EHR29862.1| hypothetical protein M1M_00493 [Brucella abortus bv. 1 str. NI259]
gi|374559766|gb|EHR31151.1| hypothetical protein M1K_00493 [Brucella abortus bv. 1 str. NI021]
Length = 168
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 13/143 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
+V +T G++ YP +AP V I +L R G Y+ F RV GF+AQ DV G+S
Sbjct: 10 LVLETTKGNVVLELYPDLAPGHVARIKELAREGAYDGVVFHRVIDGFMAQTGDVKFGKSG 69
Query: 90 --------APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
A M + + + EFS+ H RG SM R ++PNSA S F I DAP
Sbjct: 70 GAHFDGSRAGMGGSDKAD----LKAEFSNTPHKRGTASMARSANPNSANSQFFICFADAP 125
Query: 142 HLDGQYAVFGKVTKGDETLRKLE 164
LD QY V+G+V +G + + +++
Sbjct: 126 WLDRQYTVWGQVIEGMDNVDQIK 148
>gi|395779795|ref|ZP_10460264.1| hypothetical protein MCW_00351 [Bartonella washoensis 085-0475]
gi|423712832|ref|ZP_17687130.1| hypothetical protein MCQ_01586 [Bartonella washoensis Sb944nv]
gi|395410528|gb|EJF77082.1| hypothetical protein MCQ_01586 [Bartonella washoensis Sb944nv]
gi|395420170|gb|EJF86455.1| hypothetical protein MCW_00351 [Bartonella washoensis 085-0475]
Length = 170
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + +P +AP V + +LVR G Y+ F RV F+AQ DV G +
Sbjct: 11 LILETTKGKVIIELFPDLAPCHVARVKELVREGAYDNVVFHRVIDEFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ R + + EFS++ H RG +SM R +PNSA S F I DAP LD
Sbjct: 71 GEKFNLSRAGMGGSEKPNLTAEFSNLSHKRGTVSMARSQNPNSANSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGQVLEGMENVDKIK 149
>gi|150396484|ref|YP_001326951.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
medicae WSM419]
gi|150027999|gb|ABR60116.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
medicae WSM419]
Length = 169
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +L R G Y+ F RV F+AQ DV G++
Sbjct: 11 IIMETTKGRVVIELLPDVAPGHVARIKELTREGAYDGVVFHRVIDDFMAQTGDVQYGKTG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFSDV HVRG SM R PNSA S F I D+P L+
Sbjct: 71 GEQFNPARAGMGGSSKPDLKAEFSDVSHVRGTCSMARSQMPNSANSQFFICFTDSPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY+V+G+V +G E + ++ G P R
Sbjct: 131 QYSVWGQVVEGMENIDAIKRGEPVR 155
>gi|168181030|ref|ZP_02615694.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum NCTC 2916]
gi|226951017|ref|YP_002806108.1| putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Clostridium botulinum A2 str. Kyoto]
gi|421838713|ref|ZP_16272492.1| putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Clostridium botulinum CFSAN001627]
gi|182668175|gb|EDT80154.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum NCTC 2916]
gi|226841977|gb|ACO84643.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum A2 str. Kyoto]
gi|409737593|gb|EKN38755.1| putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Clostridium botulinum CFSAN001627]
Length = 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAP 91
+N +++ YP +AP TVD+ LV G YN F RV GF+ Q GG +
Sbjct: 10 SNGKEMKIELYPEIAPNTVDNFISLVNKGFYNGIIFHRVIPGFMIQ-----GGCPNGNGM 64
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
++ E G +++KH G++SM R PNSA S F I++ DAPHLD QYA FG
Sbjct: 65 GGPGYSIKGEFKSNGFNNELKHTEGVISMARTMQPNSAGSQFFIMVADAPHLDNQYAAFG 124
Query: 152 KVTKGDETLRKL 163
KV +G + +++
Sbjct: 125 KVIEGLDVAKEI 136
>gi|302670104|ref|YP_003830064.1| peptidyl-prolyl cis-trans isomerase cyclophilin-type [Butyrivibrio
proteoclasticus B316]
gi|302394577|gb|ADL33482.1| peptidyl-prolyl cis-trans isomerase cyclophilin-type [Butyrivibrio
proteoclasticus B316]
Length = 180
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ L+ Y+ F RV GF+ Q D G G P +++ E
Sbjct: 28 LYPEIAPNTVNNFISLINKNFYDGLIFHRVINGFMLQGGDPEGTGMGGPGYDIK---GEF 84
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
+ G +D+KH G+LSM R P+SA S F I+ APHLDG YA FGKVT+G E + K
Sbjct: 85 SSNGFKNDLKHTEGVLSMARSMMPDSAGSQFFIMHKKAPHLDGDYAAFGKVTEGMEIVNK 144
Query: 163 L 163
+
Sbjct: 145 I 145
>gi|345860315|ref|ZP_08812635.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Desulfosporosinus sp. OT]
gi|344326631|gb|EGW38089.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Desulfosporosinus sp. OT]
Length = 152
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N I+ YP VAPQTV + LV G ++ F RV GF+ Q D N
Sbjct: 3 NGNTIKIELYPEVAPQTVKNFVSLVTEGFFDGLIFHRVIPGFMIQGGDP--------NGT 54
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+++T+ GEFS D++H RG++SM R S PNSA+S F I++ + HLDGQYA
Sbjct: 55 GMGGSKQTIPGEFSSNGFKNDLRHDRGVISMARTSAPNSASSQFFIVVKASTHLDGQYAS 114
Query: 150 FGKVTKGDETLRKL 163
FGKV +G E + ++
Sbjct: 115 FGKVIEGMEEVDRI 128
>gi|261325183|ref|ZP_05964380.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
neotomae 5K33]
gi|261301163|gb|EEY04660.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
neotomae 5K33]
Length = 168
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 13/143 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
+V +T G++ YP +AP V I +L R G Y+ F RV GF+AQ DV G+S
Sbjct: 10 LVLETTKGNVVLELYPDLAPGHVARIKELAREGAYDGVVFHRVIDGFMAQTGDVKFGKSG 69
Query: 90 --------APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
A M + + + EFS+ H RG SM R ++PNSA S F I DAP
Sbjct: 70 GAHFDGLRAGMGGSDKAD----LKAEFSNTPHKRGTASMARSANPNSANSQFFICFADAP 125
Query: 142 HLDGQYAVFGKVTKGDETLRKLE 164
LD QY V+G+V +G + + +++
Sbjct: 126 WLDRQYTVWGQVIEGMDNVDQIK 148
>gi|153009508|ref|YP_001370723.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
anthropi ATCC 49188]
gi|151561396|gb|ABS14894.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Ochrobactrum
anthropi ATCC 49188]
Length = 168
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
+V +T G++ YP +AP V + +L R G Y+ F RV GF+AQ DV G++
Sbjct: 10 LVLETTKGNVVLELYPDLAPDHVARVKELAREGAYDGVVFHRVIDGFMAQTGDVKFGKTG 69
Query: 90 --------APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
A M + + + EFS+ H RG SM R ++PNSA S F I DAP
Sbjct: 70 GAHFNGSRAGMGGSDKPD----LKAEFSNTPHKRGTASMARSANPNSANSQFFICFADAP 125
Query: 142 HLDGQYAVFGKVTKGDETLRKLE 164
LD QY+V+G+V +G + + K++
Sbjct: 126 WLDRQYSVWGQVIEGMDNVDKIK 148
>gi|225377797|ref|ZP_03755018.1| hypothetical protein ROSEINA2194_03448 [Roseburia inulinivorans DSM
16841]
gi|225210381|gb|EEG92735.1| hypothetical protein ROSEINA2194_03448 [Roseburia inulinivorans DSM
16841]
Length = 172
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP +AP TV++ LV+ G Y+ F RV GF+ Q D G G
Sbjct: 6 VTIEMENGDIMKAELYPEIAPNTVNNFISLVKKGFYDGVIFHRVINGFMIQGGDPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P E++ E + G +D+KH G+LSM R P+SA S F I+ ++PHLDG YA
Sbjct: 66 GGPGYEIK---GEFSQNGFKNDLKHSEGVLSMARTMIPDSAGSQFFIMHKNSPHLDGAYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGKV G + + K+
Sbjct: 123 AFGKVIDGMDVVNKI 137
>gi|91202459|emb|CAJ72098.1| strongly similar to peptidylprolylisomerase [Candidatus Kuenenia
stuttgartiensis]
Length = 190
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 15/166 (9%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+V+ +TN G+I YP AP+TV++ K VR G YN F RV KGF+ Q GG +
Sbjct: 27 KVLLETNQGEIVLELYPEKAPETVENFLKYVRDGFYNGTIFHRVIKGFMIQ----GGGMT 82
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD--GQ- 146
M++ ++ K ++ +K++RG ++M R DP+SA + F I D LD GQ
Sbjct: 83 EGMSKKTTLDPVKNEA--YNGLKNLRGTVAMARTMDPHSATAQFFINTVDNGFLDFKGQT 140
Query: 147 -----YAVFGKVTKGDETLRKLEGLP-TRKEGIFVMPTERITIHSS 186
Y VFGKV KG E + +E +P T+KEG +P + + +
Sbjct: 141 ATGWGYCVFGKVIKGMEVVDAIEQMPTTKKEGHSDVPRSTVVLKKA 186
>gi|261325184|ref|ZP_05964381.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261301164|gb|EEY04661.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 196
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 12 ITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFF 71
I + TAS+ DP+ V+ + GD+ P +AP+ V I KLVR G YN F
Sbjct: 18 IGAVQTASAA-DPE---NTVILKLKDGDVALELRPDLAPKHVAQIKKLVREGAYNGVAFH 73
Query: 72 RVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPN 127
R GF+AQ DV G + RV + + EFS VRG + M R +PN
Sbjct: 74 RAIPGFMAQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPN 133
Query: 128 SAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
SA S F I+ D P L+GQY V GKV G + K++
Sbjct: 134 SANSQFFIMFDDGPFLNGQYTVVGKVVSGMHAVDKIK 170
>gi|319783736|ref|YP_004143212.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169624|gb|ADV13162.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 195
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 2 LNVIRIFLTLITLIGTASSQE---DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFK 58
L + FL ++ + TAS DP+ +V GD+ P +AP+ V+ I K
Sbjct: 3 LKKLASFLVVLAGLVTASVSAFAADPE---NTMVITLKDGDVTIALRPDLAPKHVEQIKK 59
Query: 59 LVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT-------VVGEFSDV 111
LVR G Y+ F RV GF+AQ DV G M + EA T + EFS
Sbjct: 60 LVRQGAYDNVAFHRVIDGFMAQTGDVKFGN---MKKGFSAEAVGTGGSDLPDLPAEFSQT 116
Query: 112 KHV-RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRK 170
+H RG++ M R DPNSA S F I+ AP LDGQY + G V G E + ++
Sbjct: 117 EHYKRGVVGMARSQDPNSANSQFFIMFAPAPPLDGQYTIVGNVVSGMELVDHVKKGDQAD 176
Query: 171 EGIFVMPTERITI 183
G P I +
Sbjct: 177 NGTVSDPDRMIKV 189
>gi|225028017|ref|ZP_03717209.1| hypothetical protein EUBHAL_02286 [Eubacterium hallii DSM 3353]
gi|224954617|gb|EEG35826.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Eubacterium
hallii DSM 3353]
Length = 173
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ LV+ G Y+ F RV KGF+ Q +G + N ++ E +
Sbjct: 20 LYPQIAPNTVNNFISLVKKGFYDGLIFHRVIKGFMIQGGCPLGNGTG--NPGYSIKGEFS 77
Query: 104 VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
G + +KH G+LSM R PNSA S F I+ APHLDG+YA FGKV +G + + K+
Sbjct: 78 NNGFTNQLKHEAGVLSMARSMMPNSAGSQFFIMHKAAPHLDGEYAAFGKVIEGMDVVDKI 137
Query: 164 EGLPT 168
+ T
Sbjct: 138 ASVKT 142
>gi|170761649|ref|YP_001788901.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
botulinum A3 str. Loch Maree]
gi|169408638|gb|ACA57049.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum A3 str. Loch Maree]
Length = 172
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAP 91
+N +++ YP +AP TV++ LV G YN F RV GF+ Q GG +
Sbjct: 10 SNGKEMKIELYPEIAPNTVNNFISLVNKGFYNGVIFHRVIPGFMIQ-----GGCPNGNGM 64
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
++ E G +++KH G+LSM R PNS S F I+ DAPHLDGQYA FG
Sbjct: 65 GGPGYSIKGEFKTNGFNNELKHTEGVLSMARTMQPNSGGSQFFIMADDAPHLDGQYAAFG 124
Query: 152 KVTKGDETLRKL 163
KV +G + ++++
Sbjct: 125 KVIEGLDIVKEI 136
>gi|399072035|ref|ZP_10750157.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Caulobacter sp. AP07]
gi|398042880|gb|EJL35836.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Caulobacter sp. AP07]
Length = 155
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G + P +AP V+ I +LVR G Y+ F RV GF+AQ D G GR
Sbjct: 16 GPVTITLRPDLAPGHVERIKELVREGFYDGVVFHRVIPGFMAQGGDPTGTGRGG------ 69
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
A+ + EFS HVRG+ SM R DPNSA S F I+ DA LD QY V+G+VT G
Sbjct: 70 --SAKPDIKAEFSKEPHVRGVCSMARTPDPNSANSQFFIVFDDATFLDNQYTVWGQVTDG 127
Query: 157 DETLRKLE-GLPTRKEGIFV 175
+ + L G P R G V
Sbjct: 128 MDLVDALPAGEPPRAPGKIV 147
>gi|167646151|ref|YP_001683814.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Caulobacter
sp. K31]
gi|167348581|gb|ABZ71316.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Caulobacter
sp. K31]
Length = 155
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G + P +AP V+ I +LVR G Y+ F RV GF+AQ D G GR
Sbjct: 16 GPVTIKMRPDLAPGHVERIKELVREGFYDGVVFHRVIPGFMAQGGDPTGTGRGG------ 69
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
A+ + EFS HVRG+ SM R DPNSA S F I+ DA LD QY V+G+V +G
Sbjct: 70 --SAKDDIKAEFSKEPHVRGVCSMARTPDPNSANSQFFIVFDDATFLDNQYTVWGQVVEG 127
Query: 157 DETLRKLE-GLPTRKEG 172
E + L G P R+ G
Sbjct: 128 MENVDALPAGEPPREPG 144
>gi|170755022|ref|YP_001783200.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
botulinum B1 str. Okra]
gi|387819842|ref|YP_005680189.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum H04402
065]
gi|169120234|gb|ACA44070.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum B1 str. Okra]
gi|322807886|emb|CBZ05461.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum H04402
065]
Length = 172
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAP 91
+N +I+ YP +AP TV++ LV G YN F RV GF+ Q GG +
Sbjct: 10 SNGKEIKIELYPEIAPNTVNNFISLVNKGFYNGVIFHRVIPGFMIQ-----GGCPNGNGM 64
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
++ E G +++KH G++SM R PNSA S F I++ DAPHLD QYA FG
Sbjct: 65 GGPGYSIKGEFKSNGFNNELKHTEGVISMARTMQPNSAGSQFFIMVADAPHLDNQYAAFG 124
Query: 152 KVTKGDETLRKL 163
KV +G + +++
Sbjct: 125 KVIEGLDVAKEI 136
>gi|451816934|ref|YP_007453135.1| peptidyl-prolyl cis-trans isomerase A [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451782913|gb|AGF53881.1| peptidyl-prolyl cis-trans isomerase A [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 174
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G I+ YP +AP TV + L+ G Y+ F RV GF+ Q G G P
Sbjct: 12 NGGVIKAELYPEIAPNTVRNFVDLINRGFYDGLIFHRVIPGFMIQGGCPEGSGVGGPG-- 69
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E T G + +KH +G+LSM R P+SA S F I++ DAPHLDGQYA FGKV
Sbjct: 70 -YSIKGEFTSNGFKNTLKHSKGVLSMARAMHPDSAGSQFFIMVADAPHLDGQYASFGKVI 128
Query: 155 KGDETLRKL 163
+G E K+
Sbjct: 129 EGMEVADKI 137
>gi|167042521|gb|ABZ07246.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[uncultured marine crenarchaeote HF4000_ANIW133C7]
gi|167043178|gb|ABZ07887.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[uncultured marine crenarchaeote HF4000_ANIW141J13]
Length = 162
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ +T++G+I+F +AP+TV + KL + G Y+ F RV GF+ Q D
Sbjct: 4 AIIKTSFGNIKFNLMSDIAPETVRNFVKLAKDGFYDGTLFHRVIPGFMIQGGDPNTKDPN 63
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGD--APHLDGQYA 148
++ ++ EFS H+ GI+SM R +DPNSA S F I+ D LD +Y
Sbjct: 64 MKSQWGMGGPGHSINAEFSSQSHLEGIVSMARATDPNSAGSQFFIVTSDNNTHALDRKYT 123
Query: 149 VFGKVTKGDETLRKLEGLP 167
VFGKVT+G + K+E LP
Sbjct: 124 VFGKVTEGMDVAHKIEKLP 142
>gi|395789455|ref|ZP_10468975.1| hypothetical protein ME9_00692 [Bartonella taylorii 8TBB]
gi|395429998|gb|EJF96050.1| hypothetical protein ME9_00692 [Bartonella taylorii 8TBB]
Length = 197
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 86/183 (46%), Gaps = 10/183 (5%)
Query: 5 IRIFLTLITL-----IGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+RIF+ L ++ + + + S +V GD+ P +AP+ V I +L
Sbjct: 3 LRIFIVLTSIFCFFSLSAVADDSNTADNSNVLVLSLENGDVVIRLRPDLAPKHVAQIKRL 62
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRV----EAEKTVVGEFSDVKHV 114
+ G YN F RV GF+AQ DV G+ +N + +RV + EFS
Sbjct: 63 TKDGAYNNVVFHRVIPGFMAQTGDVEFGKKGSVNFDPKRVGTGGSKYPNISAEFSKQPFK 122
Query: 115 RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIF 174
RG + M R DPNSA S F I DA L+GQY V G+V +G + + K++ T G
Sbjct: 123 RGTVGMARAQDPNSANSQFFICFNDAAFLNGQYTVVGEVIEGMDAVDKIKKGTTNNNGSV 182
Query: 175 VMP 177
P
Sbjct: 183 TNP 185
>gi|253579746|ref|ZP_04857014.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848745|gb|EES76707.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 179
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 69/127 (54%), Gaps = 16/127 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ LV+ G Y+ F RV GF+ Q G G P ++
Sbjct: 27 LYPEIAPNTVNNFISLVKKGFYDGLIFHRVINGFMIQGGCPDGTGMGGPGYSIK------ 80
Query: 103 TVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
GEF+ D+KH G+LSM R PNSA S F I+ DAPHLDG YA FGK+T+G
Sbjct: 81 ---GEFTQNRFKNDLKHTAGVLSMARAMHPNSAGSQFFIMHKDAPHLDGAYAAFGKITEG 137
Query: 157 DETLRKL 163
+ + ++
Sbjct: 138 MDVVNRI 144
>gi|161529248|ref|YP_001583074.1| peptidyl-prolyl isomerase [Nitrosopumilus maritimus SCM1]
gi|160340549|gb|ABX13636.1| Peptidylprolyl isomerase [Nitrosopumilus maritimus SCM1]
Length = 158
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
+TN+G I F P +AP+TV + KL + G Y+ F RV GF+ Q D P
Sbjct: 7 ETNFGKISFKLLPDLAPETVRNFEKLAKDGFYDGTLFHRVIPGFMIQGGD-------PNT 59
Query: 94 EVQRVEAEKT------VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
+ + T V EF+ H+RGI+SM R DP+SA S F I+ D+ LD QY
Sbjct: 60 KTDNKSSWGTGGPGYNVKAEFNSRSHLRGIVSMARAQDPDSAGSQFFIVTADSTFLDRQY 119
Query: 148 AVFGKVTKGDETLRKLEGL 166
VFG+VT+G + K+ L
Sbjct: 120 TVFGEVTEGMDVADKIVNL 138
>gi|402850677|ref|ZP_10898869.1| Peptidyl-prolyl cis-trans isomerase [Rhodovulum sp. PH10]
gi|402499058|gb|EJW10778.1| Peptidyl-prolyl cis-trans isomerase [Rhodovulum sp. PH10]
Length = 187
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 1 MLNVIRIFLTLITLIGTASSQE--------DPQLGSARVVFQTNYGDIEFGFYPSVAPQT 52
M+ VI F L ++ TA + DPQ VV TN G I +AP+
Sbjct: 1 MIRVITAFAVL--MLATAVQAQTVSLPKGVDPQHA---VVLDTNKGRIVIALRTDLAPKH 55
Query: 53 VDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVK 112
I +L R G Y+ F RV GF+AQ D G ++ + AE FS+V
Sbjct: 56 AARIERLAREGFYDNVPFHRVIDGFMAQTGDGEFGNGTGGSKYPDLPAE------FSNVP 109
Query: 113 HVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL-EGLPTRKE 171
RG++ M R SDPNSA S F I+ AP LDGQY V G+V G + K+ +G P R
Sbjct: 110 FKRGMVGMARTSDPNSANSQFFIMFAPAPSLDGQYTVVGEVVSGMNVVDKIKKGSPARNG 169
Query: 172 GI 173
+
Sbjct: 170 AV 171
>gi|395782073|ref|ZP_10462481.1| hypothetical protein MCY_00878 [Bartonella rattimassiliensis 15908]
gi|395419805|gb|EJF86095.1| hypothetical protein MCY_00878 [Bartonella rattimassiliensis 15908]
Length = 170
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + + +AP V I +LVR G Y+ F RV GF+AQ DV G +
Sbjct: 11 LILETTKGRVVIELFADLAPGHVTRIKELVREGAYDNVIFHRVIDGFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ R + + EFS++ H RG +SM R +PNSA S F I DAP LD
Sbjct: 71 GEKFNLSRAGMGGSEKPNLTAEFSNLSHKRGTVSMARGQNPNSANSQFFICFSDAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGEVVEGMENVDKIK 149
>gi|404319203|ref|ZP_10967136.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
anthropi CTS-325]
Length = 168
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 13/143 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
+V +T G++ YP +AP V + +L R G Y+ F RV GF+AQ DV G++
Sbjct: 10 LVLETTKGNVVLELYPDLAPDHVARVKELAREGAYDGVVFHRVIDGFMAQTGDVKFGKTG 69
Query: 90 --------APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
A M + + + EFS+ H RG SM R ++PNSA S F I DAP
Sbjct: 70 GAHFNGSRAGMGGSDKPD----LKAEFSNTPHKRGTASMARSANPNSANSQFFICFADAP 125
Query: 142 HLDGQYAVFGKVTKGDETLRKLE 164
LD QY+V+G+V G + + K++
Sbjct: 126 WLDRQYSVWGQVIDGMDNVDKIK 148
>gi|451940773|ref|YP_007461411.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin type [Bartonella
australis Aust/NH1]
gi|451900160|gb|AGF74623.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin type [Bartonella
australis Aust/NH1]
Length = 170
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G I + +AP V I +L G Y+ F RV GF+AQ DV G+
Sbjct: 11 LILETTKGKIVIELFADLAPCHVMRIKELADEGAYDNVVFHRVIDGFMAQTGDVQFGKK- 69
Query: 91 PMNEVQRVEAEKTVVG---------EFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
+ ++ + + +G EFS+ H RGI+SM R +PNSA S F I L DAP
Sbjct: 70 ---DSEKFNSSRVGMGGSDKPDLKAEFSNFSHKRGIVSMARSQNPNSANSQFFICLADAP 126
Query: 142 HLDGQYAVFGKVTKGDETLRKLE-GLPTRKEGIFVMPT 178
LD QY+V+G+V +G E + K++ G P + + T
Sbjct: 127 WLDRQYSVWGQVIEGMENVDKIKRGEPVVNPDVIIKAT 164
>gi|255654390|ref|ZP_05399799.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile
QCD-23m63]
gi|296449114|ref|ZP_06890901.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08]
gi|296880909|ref|ZP_06904857.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07]
gi|296261933|gb|EFH08741.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP08]
gi|296428196|gb|EFH14095.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile NAP07]
Length = 174
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N +I+ YP++AP TV + LV G YN F RV GF+ Q G G P
Sbjct: 14 NGKEIKIELYPNIAPNTVKNFVSLVNEGYYNGIIFHRVIPGFMIQGGCPNGTGMGGPG-- 71
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E + G +++KH RG++SM R PNSA S F I+ ++PHLDGQYA FG+V
Sbjct: 72 -HSIKGEFSGNGFTNNLKHERGVISMARTMAPNSAGSQFFIMHKNSPHLDGQYAGFGRVI 130
Query: 155 KGDETLRKLEGLPT 168
+G +T+ ++ + T
Sbjct: 131 EGMDTVDEIASVKT 144
>gi|161619045|ref|YP_001592932.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brucella
canis ATCC 23365]
gi|260566368|ref|ZP_05836838.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|376276292|ref|YP_005116731.1| peptidyl-prolyl cis-trans isomerase [Brucella canis HSK A52141]
gi|161335856|gb|ABX62161.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella
canis ATCC 23365]
gi|260155886|gb|EEW90966.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|363404859|gb|AEW15154.1| Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Brucella canis HSK A52141]
Length = 196
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 12 ITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFF 71
I + TAS+ DP+ V+ + GD+ P +AP+ V I KLVR G YN F
Sbjct: 18 IGAVQTASAA-DPE---NTVILKLKDGDVALELRPDLAPKHVAQIKKLVREGAYNGVAFH 73
Query: 72 RVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPN 127
RV F+AQ DV G + RV + + EFS VRG + M R +PN
Sbjct: 74 RVIPDFMAQTGDVKFGNMDKGFDAARVGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPN 133
Query: 128 SAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
SA S F I+ D P L+GQY V GKV G + + K++
Sbjct: 134 SANSQFFIMFDDGPFLNGQYTVVGKVVSGMDAVDKIK 170
>gi|347755672|ref|YP_004863236.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Candidatus
Chloracidobacterium thermophilum B]
gi|347588190|gb|AEP12720.1| Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Candidatus Chloracidobacterium thermophilum B]
Length = 224
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
+L R V +++ G+I F+P VAP V + +L G Y+ F R+ + FV Q D
Sbjct: 51 ELKQVRAVIESSAGNIVLEFFPEVAPNHVRNFLRLAEQGFYDRTEFNRIARDFVIQGGDP 110
Query: 85 VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
+ N R + + EF+++ H +GILSM S+P+SA + + I L LD
Sbjct: 111 AKWPADSPNRRLRFDT-SPLKAEFNEMPHDKGILSMAHGSNPDSATTHYFICLRRLESLD 169
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
G+Y VFG+V +G + + K+ P + G P ER+ + +
Sbjct: 170 GKYTVFGRVVEGLDVVDKIAETPI-EPGTADKPAERVEVRT 209
>gi|340345717|ref|ZP_08668849.1| Peptidylprolyl isomerase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520858|gb|EGP94581.1| Peptidylprolyl isomerase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 158
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 29 ARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGR 88
+ + +TN G I F P +AP+TV + KL + G Y+ F RV GF+ Q D +
Sbjct: 2 STAIIETNLGTIVFKLLPDLAPETVRNFEKLAKDGFYDGTLFHRVIPGFMIQGGDP-NTK 60
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
S + T+ EFS H RGI+SM R DPNSA S F I+ D+ LD QY
Sbjct: 61 SGNKSTWGTGGPGYTIKAEFSSRSHHRGIVSMARAQDPNSAGSQFFIVTTDSTFLDRQYT 120
Query: 149 VFGKVTKGDETLRKL 163
VFG+VT+G + K+
Sbjct: 121 VFGEVTEGMDVADKI 135
>gi|15888986|ref|NP_354667.1| peptidyl prolyl cis-trans isomerase [Agrobacterium fabrum str. C58]
gi|335036522|ref|ZP_08529849.1| peptidyl prolyl cis-trans isomerase [Agrobacterium sp. ATCC 31749]
gi|15156770|gb|AAK87452.1| peptidyl prolyl cis-trans isomerase [Agrobacterium fabrum str. C58]
gi|333792413|gb|EGL63783.1| peptidyl prolyl cis-trans isomerase [Agrobacterium sp. ATCC 31749]
Length = 189
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
Q G + P VAP+ V I L + G Y+ F RV GF+AQ DV G
Sbjct: 32 QLKDGPVVIELMPQVAPKHVAQIEALAKKGAYDNVAFHRVIDGFMAQTGDVQYGNMEKGF 91
Query: 94 EVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
QR + + EFS RG++ M R SDPNSA S F I+ D P L+GQY V
Sbjct: 92 NAQRAGTGGSDMADIPAEFSKTPFTRGVVGMARSSDPNSANSQFFIMFADGPFLNGQYTV 151
Query: 150 FGKVTKGDETLRKLE 164
GKV G E + K++
Sbjct: 152 VGKVVSGMEAVDKIK 166
>gi|187777457|ref|ZP_02993930.1| hypothetical protein CLOSPO_01024 [Clostridium sporogenes ATCC
15579]
gi|187774385|gb|EDU38187.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
sporogenes ATCC 15579]
Length = 172
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAP 91
+N +++ YP +AP TV++ LV G YN F RV GF+ Q GG +
Sbjct: 10 SNGKEMKIELYPEIAPNTVNNFISLVNKGFYNGVIFHRVIPGFMIQ-----GGCPNGNGM 64
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
++ E G +++KH GI+SM R PNSA S F I++ DAPHLD QYA FG
Sbjct: 65 GGPGYSIKGEFKSNGFNNELKHTEGIISMARTMQPNSAGSQFFIMVADAPHLDNQYAAFG 124
Query: 152 KVTKGDETLRKL 163
KV +G + +++
Sbjct: 125 KVIEGLDVAKEI 136
>gi|429245247|ref|ZP_19208652.1| peptidyl-prolyl cis-trans isomerase, partial [Clostridium botulinum
CFSAN001628]
gi|428757728|gb|EKX80195.1| peptidyl-prolyl cis-trans isomerase, partial [Clostridium botulinum
CFSAN001628]
Length = 165
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAP 91
+N +I+ YP +AP TV++ LV G YN F RV GF+ Q GG +
Sbjct: 3 SNGKEIKIELYPEIAPNTVNNFISLVNKGFYNGVIFHRVIPGFMIQ-----GGCPNGNGM 57
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
++ E G +++KH G++SM R PNSA S F I++ DAPHLD QYA FG
Sbjct: 58 GGPGYSIKGEFKSNGFNNELKHTEGVISMARTMQPNSAGSQFFIMVADAPHLDNQYAAFG 117
Query: 152 KVTKGDETLRKL 163
KV +G + +++
Sbjct: 118 KVIEGLDVAKEI 129
>gi|385209047|ref|ZP_10035915.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Burkholderia sp. Ch1-1]
gi|385181385|gb|EIF30661.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Burkholderia sp. Ch1-1]
Length = 193
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+F+T+ GDI YP AP+TV + V+ G Y+ F RV +GF
Sbjct: 19 AFAQSGSQAAHPSVLFKTSEGDIRVELYPEKAPKTVANFLDYVKSGQYSGTIFHRVIRGF 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q G + ++ V+ + +K+ G L+M R SDPNSA + F I
Sbjct: 79 MIQ------GGGYTQSFAEKPTRAPIVLESRNGLKNTTGTLAMARTSDPNSATAQFFINT 132
Query: 138 GDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
D P+ DG YAVFGKVT G + ++K+EG PT G +P + + I S+
Sbjct: 133 VDNAGLDYPNPDGNGYAVFGKVTGGMDVVKKIEGTPTTSRGPMSDVPQKPVVIESA 188
>gi|408787169|ref|ZP_11198902.1| peptidyl prolyl cis-trans isomerase [Rhizobium lupini HPC(L)]
gi|424910474|ref|ZP_18333851.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392846505|gb|EJA99027.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. viciae USDA 2370]
gi|408487122|gb|EKJ95443.1| peptidyl prolyl cis-trans isomerase [Rhizobium lupini HPC(L)]
Length = 189
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
Q G + P VAP+ V I L + G Y+ F RV GF+AQ DV G
Sbjct: 32 QLKDGPVVIELMPDVAPKHVAQIEALAKKGAYDNVAFHRVIDGFMAQTGDVQYGNMEKGF 91
Query: 94 EVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
QR + + EFS V RG++ M R DPNSA S F I+ D P L+GQY V
Sbjct: 92 SAQRAGTGGSDLPDIPAEFSKVPFTRGVVGMARSQDPNSANSQFFIMFADGPFLNGQYTV 151
Query: 150 FGKVTKGDETLRKLE 164
GKV G E + K++
Sbjct: 152 VGKVVSGMEAVDKIK 166
>gi|160893388|ref|ZP_02074174.1| hypothetical protein CLOL250_00938 [Clostridium sp. L2-50]
gi|156864963|gb|EDO58394.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
sp. L2-50]
Length = 176
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 26 LGSARVVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
L + V GD I+ YP +AP TV++ LV+ G YN +F R+ GF+ Q
Sbjct: 5 LANPIVTITMENGDVIKAELYPDIAPNTVNNFISLVKKGFYNGLNFHRIINGFMIQGGCP 64
Query: 85 VG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
G G P ++ E + G +D+KH G+LSM R P+SA S F I+ APHL
Sbjct: 65 EGTGMGGPN---YSIKGEFSQNGFKNDLKHTEGVLSMARSMRPDSAGSQFFIMHKAAPHL 121
Query: 144 DGQYAVFGKVTKGDETLRKL 163
DG YA FGKV +G + + K+
Sbjct: 122 DGAYAAFGKVIEGMDVVNKI 141
>gi|261219440|ref|ZP_05933721.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella ceti
M13/05/1]
gi|261321936|ref|ZP_05961133.1| peptidyl-prolyl cis-trans isomerase [Brucella ceti M644/93/1]
gi|260924529|gb|EEX91097.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brucella ceti
M13/05/1]
gi|261294626|gb|EEX98122.1| peptidyl-prolyl cis-trans isomerase [Brucella ceti M644/93/1]
Length = 168
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VG 86
+V +T G++ YP +AP V I +L R G Y+ F RV GF+AQ DV +G
Sbjct: 10 LVLETTKGNVVLELYPDLAPGHVARIKELAREGAYDGVVFHRVIDGFMAQTGDVKFGKLG 69
Query: 87 GRSAPMNEVQRVEAEKT-VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G + ++K + EFS+ H RG SM R ++PNSA S F I DAP LD
Sbjct: 70 GAHFDGSRAGMGGSDKADLKAEFSNTPHKRGTASMARSANPNSANSQFFICFADAPWLDR 129
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V+G+V +G + + +++
Sbjct: 130 QYTVWGQVIEGMDNVDQIK 148
>gi|299541818|ref|ZP_07052141.1| peptidyl-prolyl cis-trans isomerase-like 1 [Lysinibacillus
fusiformis ZC1]
gi|424740100|ref|ZP_18168510.1| peptidyl-prolyl cis-trans isomerase-like 1 [Lysinibacillus
fusiformis ZB2]
gi|298725556|gb|EFI66197.1| peptidyl-prolyl cis-trans isomerase-like 1 [Lysinibacillus
fusiformis ZC1]
gi|422946323|gb|EKU40736.1| peptidyl-prolyl cis-trans isomerase-like 1 [Lysinibacillus
fusiformis ZB2]
Length = 224
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTV 104
P+VAP TV + LV+ G Y+ F RV F+ Q D G G P ++ E T
Sbjct: 73 PTVAPNTVANFIALVKDGFYDGLIFHRVIPDFMIQGGDPKGNGTGGP---DYSIDGEFTS 129
Query: 105 VGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
G +++KH RG++SM R DPNSA S F I++ +A HLDG+YA FGKV G ET+ +
Sbjct: 130 NGFENNMKHERGVISMARSDDPNSAGSQFFIMVKEASHLDGKYAAFGKVIAGMETVDAIV 189
Query: 165 G 165
G
Sbjct: 190 G 190
>gi|153939044|ref|YP_001392915.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
botulinum F str. Langeland]
gi|384463874|ref|YP_005676469.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum F str. 230613]
gi|152934940|gb|ABS40438.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum F str. Langeland]
gi|295320891|gb|ADG01269.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum F str. 230613]
Length = 172
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAP 91
+N +I+ YP + P TV++ LV G YN F RV GF+ Q GG +
Sbjct: 10 SNGKEIKIELYPEIGPNTVNNFISLVNKGFYNGVIFHRVIPGFMIQ-----GGCPNGNGM 64
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
++ E G +++KH G++SM R PNSA S F I++ DAPHLD QYA FG
Sbjct: 65 GGPGYSIKGEFKSNGFNNELKHTEGVISMARTMQPNSAGSQFFIMVADAPHLDNQYAAFG 124
Query: 152 KVTKGDETLRKLEGL 166
KV +G + +++ G+
Sbjct: 125 KVIEGLDVAKEIVGV 139
>gi|148559805|ref|YP_001259018.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Brucella ovis
ATCC 25840]
gi|148371062|gb|ABQ61041.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Brucella
ovis ATCC 25840]
Length = 162
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD+ P +AP+ V I KLVR G YN F RV GF+AQ DV G + R
Sbjct: 6 GDVALELRPDLAPKHVAQIKKLVREGAYNGVAFHRVIPGFMAQTGDVKFGNMDKGFDAAR 65
Query: 98 VEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
V + + EFS VRG + M R +PNSA S F I+ D P L+GQY V GKV
Sbjct: 66 VGTGGSNYPDLPAEFSKEPFVRGTVGMARSQNPNSANSQFFIMFDDGPFLNGQYTVVGKV 125
Query: 154 TKGDETLRKLE 164
G + + K++
Sbjct: 126 VSGMDAVDKIK 136
>gi|384411449|ref|YP_005620814.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931823|gb|AEH62363.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 155
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
++ + GD+ P +AP+ V+ I +L R G Y+ F RV GF+AQ D G G S
Sbjct: 9 LIMTVDGGDVTIRLRPDLAPKHVERIKELTREGFYDGIVFHRVIPGFMAQGGDPTGTGMS 68
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ + EFSD KH+RG+ SM R S P+SA S F I GDA LD QY+V
Sbjct: 69 G--------SDKPDLQAEFSDAKHIRGVCSMARTSYPHSANSQFFICFGDATFLDRQYSV 120
Query: 150 FGKVTKGDETLRKL-EGLPTRKEGIFV 175
+G+V +G E + L +G P G +
Sbjct: 121 WGEVIEGMEHIDALPKGEPPANPGKII 147
>gi|167749222|ref|ZP_02421349.1| hypothetical protein EUBSIR_00173 [Eubacterium siraeum DSM 15702]
gi|167657797|gb|EDS01927.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Eubacterium
siraeum DSM 15702]
Length = 157
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V+ N I+ YP +AP T + KLV+ G Y+ F RV GF+ Q D G
Sbjct: 3 VIEMENGKKIKIELYPEIAPITCANFEKLVKEGFYDGLIFHRVISGFMIQGGDPEGTGMG 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
E ++ E G +D+KH RG++SM R P+SA+S F I+ DAPHLDG YA F
Sbjct: 63 GAKE--NIKGEFAQNGVKNDLKHTRGVISMARSMMPDSASSQFFIMHKDAPHLDGSYAAF 120
Query: 151 GKVTKGDETLRKL 163
GKV G + + ++
Sbjct: 121 GKVVDGMDAVDEI 133
>gi|366162327|ref|ZP_09462082.1| peptidyl-prolyl cis-trans isomerase [Acetivibrio cellulolyticus
CD2]
Length = 177
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N G I+ YP +AP TV L+ G YN F RV GF+ Q D
Sbjct: 17 NGGTIKAELYPDIAPNTVKSFISLINKGFYNGIIFHRVIPGFMIQGGDPE--GIGIGGPG 74
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+ E G +D+KH RG+LSM R + NSA S F I++ D+ HLDG+YA FGKV +
Sbjct: 75 YSIRGEFNSNGFKNDLKHSRGVLSMARSRERNSAGSQFFIMVKDSSHLDGEYAAFGKVIE 134
Query: 156 GDETLRKL 163
G E K+
Sbjct: 135 GMEVADKI 142
>gi|240143767|ref|ZP_04742368.1| peptidylprolyl cis-trans isomerase, cyclophilin-type [Roseburia
intestinalis L1-82]
gi|257204236|gb|EEV02521.1| peptidylprolyl cis-trans isomerase, cyclophilin-type [Roseburia
intestinalis L1-82]
gi|291537260|emb|CBL10372.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Roseburia intestinalis M50/1]
gi|291539205|emb|CBL12316.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Roseburia intestinalis XB6B4]
Length = 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP +AP TV++ L++ G Y+ F RV KGF+ Q G G
Sbjct: 6 VTIEMENGDIMKAELYPEIAPNTVNNFISLIKSGYYDGLIFHRVIKGFMIQGGCPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P +++ E + G +D+KH G+LSM R P+SA S F I+ +PHLDG YA
Sbjct: 66 GGPGYDIK---GEFSQNGFKNDLKHTEGVLSMARAMHPDSAGSQFFIMHKTSPHLDGAYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGK+T+G + + K+
Sbjct: 123 AFGKITEGMDIVNKI 137
>gi|417001825|ref|ZP_11941330.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Anaerococcus
prevotii ACS-065-V-Col13]
gi|325479711|gb|EGC82801.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 174
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
V F+ GDI + YP +AP TV + L+ Y+ F RV KGF+ Q D
Sbjct: 8 VTFEMENGDIFKAELYPEIAPNTVRNFISLINHNFYDGVIFHRVIKGFMIQGGDPE--GI 65
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
++ E + G +D+KH RG+LSM R P+SA S F ++ D+PHLDGQYA
Sbjct: 66 GIGGPGYAIKGEFSTNGFKNDLKHERGVLSMARSMMPDSAGSQFFVMHKDSPHLDGQYAG 125
Query: 150 FGKVTKGDETLRKL 163
FGKV +G + + K+
Sbjct: 126 FGKVIEGIDVVDKI 139
>gi|325293066|ref|YP_004278930.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium sp. H13-3]
gi|418408333|ref|ZP_12981649.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium tumefaciens 5A]
gi|325060919|gb|ADY64610.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium sp. H13-3]
gi|358005247|gb|EHJ97573.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium tumefaciens 5A]
Length = 189
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
Q G + P VAP+ V I L + G Y+ F RV GF+AQ DV G
Sbjct: 32 QLKDGPVVIELMPEVAPKHVAQIEALAKKGAYDNVAFHRVIDGFMAQTGDVQYGNMEKGF 91
Query: 94 EVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
QR + + EFS RG++ M R SDPNSA S F I+ D P L+GQY V
Sbjct: 92 NAQRAGTGGSDLADIPAEFSKTPFTRGVVGMARSSDPNSANSQFFIMFADGPFLNGQYTV 151
Query: 150 FGKVTKGDETLRKLE 164
GKV G E + K++
Sbjct: 152 VGKVVSGMEAVDKIK 166
>gi|417859905|ref|ZP_12504961.1| peptidyl prolyl cis-trans isomerase [Agrobacterium tumefaciens F2]
gi|338822969|gb|EGP56937.1| peptidyl prolyl cis-trans isomerase [Agrobacterium tumefaciens F2]
Length = 189
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
Q G + P VAP+ V I L + G Y+ F RV GF+AQ DV G
Sbjct: 32 QLKDGPVVIELMPKVAPKHVAQIEALAKKGAYDNVAFHRVIDGFMAQTGDVQYGNMEKGF 91
Query: 94 EVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
QR + + EFS V RG++ M R DPNSA S F I+ D P L+GQY V
Sbjct: 92 SAQRAGTGGSDLPDIPAEFSKVPFTRGVVGMARSQDPNSANSQFFIMFADGPFLNGQYTV 151
Query: 150 FGKVTKGDETLRKLE 164
GKV G E + K++
Sbjct: 152 VGKVVSGMEAVDKIK 166
>gi|310828850|ref|YP_003961207.1| peptidyl-prolyl cis-trans isomerase [Eubacterium limosum KIST612]
gi|308740584|gb|ADO38244.1| peptidyl-prolyl cis-trans isomerase [Eubacterium limosum KIST612]
Length = 164
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 20 SQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVA 79
S+++P +G + N I+ YP +AP +V++ LV+ G Y+ F RV GF+
Sbjct: 2 SEKNPVVG----IELANGKTIKVELYPDIAPISVENFLNLVKDGFYDGLIFHRVIPGFMI 57
Query: 80 QVADVVGG---RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSIL 136
Q GG + ++ E G +++KH RG+LSM R + P+SA S F I+
Sbjct: 58 Q-----GGCPSGTGTGGPGHTIKGEFAANGVENNLKHKRGVLSMARSASPDSAGSQFFIM 112
Query: 137 LGDAPHLDGQYAVFGKVTKGDETLRKL 163
+ DAPHLDGQYA FG VT+G E ++
Sbjct: 113 VEDAPHLDGQYAAFGAVTEGMEAADEI 139
>gi|114570420|ref|YP_757100.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Maricaulis
maris MCS10]
gi|114340882|gb|ABI66162.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Maricaulis
maris MCS10]
Length = 150
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
+ ++VF GD+ P +AP+ V I +L + G Y+ F RV GFVAQ
Sbjct: 1 MAEEQLVFTLEGGDVTIKLRPDLAPKHVARITELAKEGFYDGLTFHRVIDGFVAQ----- 55
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
GG N + + + EFS KHVRG +SM R SDP+SA+S F I L D P+L+
Sbjct: 56 GGCP---NGNGMGGSGQHIPAEFSAEKHVRGTMSMARASDPDSASSQFFICLDDVPYLNN 112
Query: 146 QYAVFGKVTKGDETLRKL-EGLPTRKEGIFVMPT 178
QY V+G+V G + + L +G P G + T
Sbjct: 113 QYTVWGEVISGMDHVDALPKGEPPANPGAIIKAT 146
>gi|225412321|ref|ZP_03761510.1| hypothetical protein CLOSTASPAR_05543 [Clostridium asparagiforme
DSM 15981]
gi|225042114|gb|EEG52360.1| hypothetical protein CLOSTASPAR_05543 [Clostridium asparagiforme
DSM 15981]
Length = 172
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ LV G YN F RV +GF+ Q GG +
Sbjct: 20 LYPEIAPNTVNNFISLVNKGFYNGLIFHRVIRGFMIQ-----GGCP---DGNGMGGPGYG 71
Query: 104 VVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ GEFS D+KH G+LSM R PNSA S F I+ ++PHLDG YA FGKVT+G
Sbjct: 72 IKGEFSQNGIKNDLKHTPGVLSMARSMMPNSAGSQFFIMHKNSPHLDGAYAAFGKVTEGL 131
Query: 158 ETLRKLEGLPT 168
+ + K+ + T
Sbjct: 132 DVVDKIACVQT 142
>gi|56551669|ref|YP_162508.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Zymomonas
mobilis subsp. mobilis ZM4]
gi|260752748|ref|YP_003225641.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|397676401|ref|YP_006517939.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|56543243|gb|AAV89397.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Zymomonas
mobilis subsp. mobilis ZM4]
gi|258552111|gb|ACV75057.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|395397090|gb|AFN56417.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Zymomonas
mobilis subsp. mobilis ATCC 29191]
Length = 155
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
++ + GD+ P +AP+ V+ I +L R G Y+ F RV GF+AQ D G G S
Sbjct: 9 LIMTVDGGDVTIRLRPDLAPKHVERIKELTREGFYDGIVFHRVIPGFMAQGGDPTGTGMS 68
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ + EFSD KH+RG+ SM R S P+SA S F I GDA LD QY+V
Sbjct: 69 G--------SDKPDLQAEFSDAKHIRGVCSMARTSYPHSANSQFFICFGDATFLDRQYSV 120
Query: 150 FGKVTKGDETLRKL-EGLPTRKEGIFV 175
+G+V +G E + L +G P G +
Sbjct: 121 WGEVIEGMEHIDALPKGEPPANPGKII 147
>gi|126697903|ref|YP_001086800.1| peptidyl-prolyl cis-trans isomerase B (PPIase B) (Rotamase B)
[Clostridium difficile 630]
gi|255099504|ref|ZP_05328481.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile
QCD-63q42]
gi|255305359|ref|ZP_05349531.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile ATCC
43255]
gi|423088717|ref|ZP_17077092.1| putative peptidyl-prolyl cis-trans isomerase B [Clostridium
difficile 70-100-2010]
gi|115249340|emb|CAJ67153.1| Peptidyl-prolyl cis-trans isomerase B (PPIase B) (Rotamase B)
[Clostridium difficile 630]
gi|357559211|gb|EHJ40669.1| putative peptidyl-prolyl cis-trans isomerase B [Clostridium
difficile 70-100-2010]
Length = 174
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N +I+ YP++AP TV + LV G YN F RV GF+ Q G G P
Sbjct: 14 NGKEIKIELYPNIAPNTVKNFVSLVNEGYYNGIIFHRVIPGFMIQGGCPNGTGMGGPG-- 71
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E + G +++KH RG++SM R PNSA S F I+ ++PHLDGQYA FG+V
Sbjct: 72 -HSIKGEFSGNGFTNNLKHERGVISMARTMAPNSAGSQFFIMHKNSPHLDGQYAGFGRVI 130
Query: 155 KGDETLRKLEGLPT 168
+G +T+ ++ + T
Sbjct: 131 EGMDTVDEIASVRT 144
>gi|254974002|ref|ZP_05270474.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile
QCD-66c26]
gi|255091388|ref|ZP_05320866.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile CIP
107932]
gi|255313048|ref|ZP_05354631.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile
QCD-76w55]
gi|255515805|ref|ZP_05383481.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile
QCD-97b34]
gi|255648897|ref|ZP_05395799.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile
QCD-37x79]
gi|260682113|ref|YP_003213398.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile CD196]
gi|260685711|ref|YP_003216844.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile R20291]
gi|306519013|ref|ZP_07405360.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile
QCD-32g58]
gi|384359670|ref|YP_006197522.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile BI1]
gi|423080859|ref|ZP_17069475.1| putative peptidyl-prolyl cis-trans isomerase B [Clostridium
difficile 002-P50-2011]
gi|423085233|ref|ZP_17073685.1| putative peptidyl-prolyl cis-trans isomerase B [Clostridium
difficile 050-P50-2011]
gi|260208276|emb|CBA60691.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile CD196]
gi|260211727|emb|CBE02044.1| peptidyl-prolyl cis-trans isomerase [Clostridium difficile R20291]
gi|357550288|gb|EHJ32111.1| putative peptidyl-prolyl cis-trans isomerase B [Clostridium
difficile 050-P50-2011]
gi|357552108|gb|EHJ33884.1| putative peptidyl-prolyl cis-trans isomerase B [Clostridium
difficile 002-P50-2011]
Length = 174
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N +I+ YP++AP TV + LV G YN F RV GF+ Q G G P
Sbjct: 14 NGKEIKIELYPNIAPNTVKNFVSLVNEGYYNGIIFHRVIPGFMIQGGCPNGTGMGGPG-- 71
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E + G +++KH RG++SM R PNSA S F I+ ++PHLDGQYA FG+V
Sbjct: 72 -HSIKGEFSGNGFTNNLKHERGVISMARTMAPNSAGSQFFIMHKNSPHLDGQYAGFGRVI 130
Query: 155 KGDETLRKLEGLPT 168
+G +T+ ++ + T
Sbjct: 131 EGMDTVDEIASVRT 144
>gi|154498533|ref|ZP_02036911.1| hypothetical protein BACCAP_02523 [Bacteroides capillosus ATCC
29799]
gi|150272601|gb|EDM99786.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Pseudoflavonifractor capillosus ATCC 29799]
Length = 177
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP VAP TV++ LV+ G YN F RV GF+ Q G G P
Sbjct: 24 LYPDVAPNTVNNFISLVQSGFYNGLIFHRVIPGFMIQGGCPNGTGMGGP---------GY 74
Query: 103 TVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
T+ GEF+ D+KH RG+LSM R PNSA S F I++ APHLDG YA FGKV +G
Sbjct: 75 TIKGEFARNGVKNDLKHDRGVLSMARAMHPNSAGSQFFIMVEKAPHLDGDYAAFGKVIEG 134
>gi|254450378|ref|ZP_05063815.1| peptidyl prolyl cis-trans isomerase B signal peptide protein
[Octadecabacter arcticus 238]
gi|198264784|gb|EDY89054.1| peptidyl prolyl cis-trans isomerase B signal peptide protein
[Octadecabacter arcticus 238]
Length = 169
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G + P VAP+ V + +LVRLG YN F RV GF+AQ DV G
Sbjct: 11 ILMELTNGTVTIELLPDVAPKHVARMKELVRLGSYNNVVFHRVIDGFMAQTGDVANGNME 70
Query: 91 PMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ R + + EFS + H RG + R + PNSA S F I GD L+GQ
Sbjct: 71 NDFNISRAGTGGSDMPDLPAEFSKIPHARGSIGAARSASPNSANSQFFINFGDNDFLNGQ 130
Query: 147 YAVFGKVTKGDETLRKL 163
Y V+G V+ G E + KL
Sbjct: 131 YTVYGMVSSGMEHVDKL 147
>gi|410659216|ref|YP_006911587.1| Peptidyl-prolyl cis-trans isomerase [Dehalobacter sp. DCA]
gi|410662202|ref|YP_006914573.1| Peptidyl-prolyl cis-trans isomerase [Dehalobacter sp. CF]
gi|409021571|gb|AFV03602.1| Peptidyl-prolyl cis-trans isomerase [Dehalobacter sp. DCA]
gi|409024558|gb|AFV06588.1| Peptidyl-prolyl cis-trans isomerase [Dehalobacter sp. CF]
Length = 172
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 31 VVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
V + GD I+ YP +AP TV++ L++ G YN F RV GF+ Q G S
Sbjct: 6 VTIEMANGDVIKAELYPEIAPNTVNNFISLIKKGFYNGLIFHRVIPGFMIQGGCPQG--S 63
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
N ++ E + G +D+KH RG+LSM R +SA S F +++ DAPHLD QYA
Sbjct: 64 GMGNPGYSIKGEFSGNGFKNDLKHSRGVLSMARSRMEDSAGSQFFVMVNDAPHLDDQYAA 123
Query: 150 FGKVTKGDETLRKL 163
FGKV +G E++ +
Sbjct: 124 FGKVIEGMESVDHI 137
>gi|386349809|ref|YP_006048057.1| peptidyl-prolyl isomerase [Rhodospirillum rubrum F11]
gi|346718245|gb|AEO48260.1| peptidylprolyl isomerase [Rhodospirillum rubrum F11]
Length = 186
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 25/191 (13%)
Query: 6 RIFLTLITLIG------TASSQEDPQLGSARVVFQTNYGDIEFG-----FYPSVAPQTVD 54
RI ++L L+ T + DP+ T Y D++ G P +AP+ V+
Sbjct: 3 RILISLFALLACMGTVMTDTKAADPE--------NTLYMDLKDGRVVIELRPDLAPKHVE 54
Query: 55 HIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKH 113
I LVR G Y+ F RV GF+ Q D G GR +++ + AE S +H
Sbjct: 55 RIKLLVRKGFYDGTPFHRVIDGFMVQGGDPTGTGRGG--SDLPDLPAE---FSPPSKARH 109
Query: 114 VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGI 173
+RG+ SM R +DP+SA S F I+L + HLDGQY ++G+VTKG + + ++ +R G
Sbjct: 110 LRGVTSMARTADPDSANSQFFIMLAPSSHLDGQYTIWGQVTKGMDFVDMIKKGDSRANGS 169
Query: 174 FVMPTERITIH 184
P + +
Sbjct: 170 VSDPDRIVKVQ 180
>gi|291549040|emb|CBL25302.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Ruminococcus torques L2-14]
Length = 172
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 26 LGSARVVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
+ + V F+ GDI + YP VAP TV++ LV+ G Y+ F RV GF+ Q D
Sbjct: 1 MANPVVTFEMENGDIMKAELYPEVAPNTVNNFVSLVKKGFYDGVIFHRVISGFMIQGGDP 60
Query: 85 VG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
G G P ++ A+ V +++ H G+LSM R P+SA S F I+ APHL
Sbjct: 61 DGTGMGGPGYSIKGEFAQNGVE---NNLVHDAGVLSMARAMHPDSAGSQFFIMHKKAPHL 117
Query: 144 DGQYAVFGKVTKGDETLRKL 163
DG YA FGK+T+G + + K+
Sbjct: 118 DGAYAAFGKITEGMDVVNKI 137
>gi|357025611|ref|ZP_09087730.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mesorhizobium
amorphae CCNWGS0123]
gi|355542479|gb|EHH11636.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mesorhizobium
amorphae CCNWGS0123]
Length = 195
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 81/181 (44%), Gaps = 5/181 (2%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
FL ++ + TAS ++ GD+ P +AP+ V I KLVR G Y+
Sbjct: 9 FLVVLVGLVTASVSAFAADAENTMIITLKDGDVTIALRPDLAPKHVAQIKKLVREGAYDN 68
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHV-RGILSMGR 122
F RV GF+AQ DV G Q V + + EFS +H RG++ M R
Sbjct: 69 VAFHRVIDGFMAQTGDVKFGNMKKGFNSQAVGTGGSDLPDLPAEFSQSEHYKRGVVGMAR 128
Query: 123 YSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERIT 182
DPNSA S F I+ AP LDGQY + G V G E + ++ G P I
Sbjct: 129 SQDPNSANSQFFIMFAPAPPLDGQYTIVGNVVSGMELVDNIKKGDEADNGTVTDPDRMIK 188
Query: 183 I 183
+
Sbjct: 189 V 189
>gi|373107221|ref|ZP_09521520.1| hypothetical protein HMPREF9623_01184 [Stomatobaculum longum]
gi|371651051|gb|EHO16485.1| hypothetical protein HMPREF9623_01184 [Stomatobaculum longum]
Length = 177
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G ++ YP VAP TV++ L + G Y+ F RV +GF+ Q +G V +
Sbjct: 14 GVMKLELYPEVAPGTVNNFLSLAKKGFYDGLIFHRVIEGFMIQGGCPIGNGEGGPGYVIK 73
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
E ++ G +D+KH RG++SM R S P+SA S F I+ APHLDG YA FGK+ +G+
Sbjct: 74 GEFKQN--GVQNDLKHERGVISMARTSIPDSAGSQFFIMHKAAPHLDGGYAAFGKLIEGE 131
Query: 158 ETLRKL 163
+ L ++
Sbjct: 132 DVLDRI 137
>gi|395790929|ref|ZP_10470388.1| hypothetical protein MEC_00379 [Bartonella alsatica IBS 382]
gi|395409225|gb|EJF75824.1| hypothetical protein MEC_00379 [Bartonella alsatica IBS 382]
Length = 170
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + + +AP V I +L R G Y+ F RV GF+AQ DV G +
Sbjct: 11 LILETTKGRVIIELFADLAPCHVARIKELTRDGAYDNVVFHRVIDGFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ R A+ + EFS++ H RG +SM R PNSA S F I DAP LD
Sbjct: 71 GEKFNLSRAGMGGSAKPNLTAEFSNLSHKRGTVSMARSQSPNSANSQFFICFTDAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGQVLEGMENVDKIK 149
>gi|291542256|emb|CBL15366.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Ruminococcus bromii L2-63]
Length = 172
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ G I+ YP +AP TV++ LV G Y+ F RV GF+ Q G G
Sbjct: 6 VTFEMENGKTIKAELYPEIAPNTVNNFLSLVNKGYYDGLTFHRVIYGFMIQGGCPEGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E V G +D+KH G+LSM R P+SA S F I+ +APHLDGQYA
Sbjct: 66 GGPG---YSIKGEFAVNGFENDLKHTEGVLSMARSMMPDSAGSQFFIMHKNAPHLDGQYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGKV +G + + ++
Sbjct: 123 AFGKVIEGMDVVNEI 137
>gi|254469897|ref|ZP_05083302.1| peptidyl prolyl cis-trans isomerase B signal peptide protein
[Pseudovibrio sp. JE062]
gi|374331557|ref|YP_005081741.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Pseudovibrio
sp. FO-BEG1]
gi|211961732|gb|EEA96927.1| peptidyl prolyl cis-trans isomerase B signal peptide protein
[Pseudovibrio sp. JE062]
gi|359344345|gb|AEV37719.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Pseudovibrio
sp. FO-BEG1]
Length = 156
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G++ P +AP V I +LVR G YN F RV GF+AQ
Sbjct: 11 LLLETTQGNVVIELRPDLAPNHVARIKELVREGFYNGIVFHRVIDGFMAQTG-------C 63
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + K + EF+D KHVRG SM R DPNS S F I G+A LDGQY V+
Sbjct: 64 P-QGTGTGGSGKKLKAEFNDAKHVRGTCSMARSMDPNSGDSQFFICFGEANWLDGQYTVW 122
Query: 151 GKVTKGDETLRKLE 164
G+V +G + + K++
Sbjct: 123 GQVVEGMDNIDKIK 136
>gi|291087279|ref|ZP_06345928.2| peptidylprolyl cis-trans isomerase, cyclophilin-type [Clostridium
sp. M62/1]
gi|291075664|gb|EFE13028.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
sp. M62/1]
Length = 180
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 5/147 (3%)
Query: 19 SSQEDPQLGSARVVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
++QED + + V + GD I+ YP +AP TV++ LV+ G Y+ F RV +GF
Sbjct: 2 NTQEDINMQNPVVTIEMENGDVIKAELYPEIAPNTVNNFVSLVKKGFYDGLIFHRVIRGF 61
Query: 78 VAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSIL 136
+ Q G G P ++ E G +D+KH G+LSM R P+SA S F I+
Sbjct: 62 MIQGGCPQGNGTGGPG---YSIKGEFARNGFKNDLKHTPGVLSMARAMHPDSAGSQFFIM 118
Query: 137 LGDAPHLDGQYAVFGKVTKGDETLRKL 163
+PHLDG+YA FG V +G + + K+
Sbjct: 119 HETSPHLDGEYAAFGHVIEGMDVVNKI 145
>gi|295110325|emb|CBL24278.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Ruminococcus obeum A2-162]
Length = 256
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 16/145 (11%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG+I+ AP TV + KLV+ Y+ F+R+ GF+ Q D G + E
Sbjct: 103 DYGEIQVELDADTAPVTVTNFVKLVQDQFYDGLTFWRIMDGFMMQGGDPKGNGTGGSGE- 161
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
T+ GEFS D+ H RG +SM R +DP+SA+S F I+ D+ LDG YA
Sbjct: 162 -------TIKGEFSGNGVDNDISHTRGTISMARSTDPDSASSQFFIVQSDSTFLDGDYAA 214
Query: 150 FGKVTKGDETLRKL--EGLPTRKEG 172
FG VT+G + + K+ E PT G
Sbjct: 215 FGHVTEGMDIVDKICKEAKPTDDNG 239
>gi|395787567|ref|ZP_10467166.1| hypothetical protein ME7_00501 [Bartonella birtlesii LL-WM9]
gi|395411082|gb|EJF77617.1| hypothetical protein ME7_00501 [Bartonella birtlesii LL-WM9]
Length = 170
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + +AP V I +LVR G Y+ F RV GF+AQ DV G +
Sbjct: 11 LILETTKGTVVIELLADLAPGHVARIKELVREGAYDNVIFHRVIDGFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRVE---AEK-TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ R AEK + EFS++ H RG +SM R PNSA S F I DAP LD
Sbjct: 71 GEKFNLSRAGMGGAEKPNLTAEFSNLSHKRGTVSMARSQHPNSANSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + +++
Sbjct: 131 QYSIWGQVIEGMENIDQIK 149
>gi|148381501|ref|YP_001256042.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
botulinum A str. ATCC 3502]
gi|153930973|ref|YP_001385876.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
botulinum A str. ATCC 19397]
gi|153934987|ref|YP_001389283.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
botulinum A str. Hall]
gi|148290985|emb|CAL85121.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum A str.
ATCC 3502]
gi|152927017|gb|ABS32517.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum A str. ATCC 19397]
gi|152930901|gb|ABS36400.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum A str. Hall]
Length = 172
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAP 91
+N +++ YP +AP TV++ LV G YN F RV GF+ Q GG +
Sbjct: 10 SNGKEMKIELYPEIAPNTVNNFISLVNKGFYNGVIFHRVIPGFMIQ-----GGCPNGNGM 64
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
++ E G +++KH G++SM R PNSA S F I++ DAPHLD QYA FG
Sbjct: 65 GGPGYSIKGEFKSNGFNNELKHTEGVISMARTMQPNSAGSQFFIMVADAPHLDNQYAAFG 124
Query: 152 KVTKGDETLRKL 163
KV +G + +++
Sbjct: 125 KVIEGLDVAKEI 136
>gi|378826068|ref|YP_005188800.1| peptidyl prolyl cis-trans isomerase [Sinorhizobium fredii HH103]
gi|365179120|emb|CCE95975.1| peptidyl prolyl cis-trans isomerase [Sinorhizobium fredii HH103]
Length = 169
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +L R G Y+ F RV + F+AQ DV G++
Sbjct: 11 IIMETTKGRVVIELRPDVAPGHVARIKELSREGAYDGVVFHRVIEDFMAQTGDVQYGKTG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS++ HVRG SM R PNSA S F I DAP L+
Sbjct: 71 GEHFNPARAGMGGSSKPDLKAEFSEISHVRGTCSMARSQMPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY+V+G+V G E + +++ G P R
Sbjct: 131 QYSVWGQVIDGMEVIDQIKRGEPVR 155
>gi|291530439|emb|CBK96024.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Eubacterium siraeum 70/3]
Length = 157
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V+ N I+ YP +AP T + KLV+ G Y+ F RV GF+ Q D G
Sbjct: 3 VIEMENGKKIKIELYPEIAPITCANFEKLVKEGFYDGLIFHRVISGFMIQGGDPEGTGMG 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
E ++ E G +D+KH RG++SM R P+SA+S F I+ DAPHLDG YA F
Sbjct: 63 GAKE--NIKGEFAQNGVKNDLKHTRGVISMARSMMPDSASSQFFIMHKDAPHLDGGYAAF 120
Query: 151 GKVTKGDETLRKL 163
GKV G + + ++
Sbjct: 121 GKVVDGMDAVDEI 133
>gi|335429788|ref|ZP_08556686.1| peptidyl-prolyl cis-trans isomerase [Haloplasma contractile
SSD-17B]
gi|334889798|gb|EGM28083.1| peptidyl-prolyl cis-trans isomerase [Haloplasma contractile
SSD-17B]
Length = 184
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 71/136 (52%), Gaps = 16/136 (11%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
IE YP VAP TV++ L G Y+ F RV GF+ Q D +G G P
Sbjct: 28 IEIELYPEVAPNTVNNFIALASDGFYDGVIFHRVISGFMIQGGDPLGQGTGGP------- 80
Query: 99 EAEKTVVGEF------SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
++ GEF + +KH RG++SM R PNSA S F I+ D+PHLDG YA FGK
Sbjct: 81 --GYSIKGEFKQNQFDNPLKHERGVISMARSMMPNSAGSQFFIMHMDSPHLDGSYAGFGK 138
Query: 153 VTKGDETLRKLEGLPT 168
V G E + ++ + T
Sbjct: 139 VKNGIEVVDEIAAIAT 154
>gi|418296445|ref|ZP_12908289.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539877|gb|EHH09115.1| peptidyl-prolyl cis-trans isomerase [Agrobacterium tumefaciens
CCNWGS0286]
Length = 189
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
P VAP+ V I L + G Y+ F RV GF+AQ DV G QR +
Sbjct: 42 LMPDVAPKHVAQIEALAKKGAYDNVAFHRVIDGFMAQTGDVQYGNMEKGFSAQRAGTGGS 101
Query: 104 ----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDET 159
+ EFS V RG++ M R DPNSA S F I+ D P L+GQY V GKV G E
Sbjct: 102 DLPDIPAEFSKVPFTRGVVGMARSQDPNSANSQFFIMFADGPFLNGQYTVVGKVVSGMEA 161
Query: 160 LRKLE 164
+ K++
Sbjct: 162 VDKIK 166
>gi|404372802|ref|ZP_10978084.1| hypothetical protein CSBG_03003 [Clostridium sp. 7_2_43FAA]
gi|226914176|gb|EEH99377.1| hypothetical protein CSBG_03003 [Clostridium sp. 7_2_43FAA]
Length = 174
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G I+ YP +AP TV + L+ G Y+ F RV GF+ Q G G P
Sbjct: 14 GVIKAELYPEIAPNTVRNFIDLINRGFYDGIIFHRVIPGFMIQGGCPEGTGIGGPG---Y 70
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
++ E + G +D+KH RG+LSM R P+SA S F I++ D+PHLDGQYA FGKV +G
Sbjct: 71 SIKGEFSRNGFKNDLKHSRGVLSMARTMIPDSAGSQFFIMVADSPHLDGQYASFGKVVEG 130
Query: 157 DETLRKL 163
E K+
Sbjct: 131 MEVADKI 137
>gi|121601934|ref|YP_989038.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Bartonella
bacilliformis KC583]
gi|421760843|ref|ZP_16197656.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Bartonella
bacilliformis INS]
gi|120614111|gb|ABM44712.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Bartonella
bacilliformis KC583]
gi|411174159|gb|EKS44193.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Bartonella
bacilliformis INS]
Length = 170
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + + +AP V I +LV G Y+ F RV GF+AQ DV G +
Sbjct: 11 LILETTKGKVVIELFADLAPGHVARIKELVNEGAYDNVVFHRVIDGFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ ++ R + + EFS++ H RG +SM R +PNS S F I DAP LD
Sbjct: 71 STTFDLSRAGIGGSNKPDLTAEFSNIAHKRGTVSMARSQNPNSGNSQFFICFADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G E + K++
Sbjct: 131 QYSVWGQVIEGIENVDKIK 149
>gi|304321601|ref|YP_003855244.1| peptidyl-prolyl cis-trans isomerase [Parvularcula bermudensis
HTCC2503]
gi|303300503|gb|ADM10102.1| peptidyl-prolyl cis-trans isomerase [Parvularcula bermudensis
HTCC2503]
Length = 146
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
++ + GD+ + AP+ V+ I L G Y+ F RV +GF+AQ G +
Sbjct: 3 KLKLELETGDVVIETFEDKAPKHVEQITSLAEDGFYDGLTFHRVIEGFMAQGGCPEGTGT 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
AE+ + EF+DV H+ G+ SM R +DPNSA+S F I L DA LDGQY
Sbjct: 63 GG--------AEENIPAEFNDVNHIEGVCSMARANDPNSASSQFFICLDDASFLDGQYTA 114
Query: 150 FGKVTKGDETLRKL-EGLPTRK 170
+G+V +G E + + +G P R
Sbjct: 115 WGRVVEGMEAVHAINKGEPPRN 136
>gi|407465702|ref|YP_006776584.1| peptidyl-prolyl isomerase [Candidatus Nitrosopumilus sp. AR2]
gi|407048890|gb|AFS83642.1| peptidyl-prolyl isomerase [Candidatus Nitrosopumilus sp. AR2]
Length = 158
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 29 ARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGR 88
A V +TN G+I F P +AP+TV + KL + G Y+ F RV GF+ Q D +
Sbjct: 2 ATVNIETNLGNISFKLLPELAPETVRNFEKLAKDGFYDGTLFHRVIPGFMIQGGDP-NTK 60
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
+ + EF+ H+RGI+SM R DP+SA S F I+ D+ LD QY
Sbjct: 61 TDNKGSWGMGGPGYNIKAEFNSRSHLRGIVSMARSQDPDSAGSQFFIVTSDSAFLDRQYT 120
Query: 149 VFGKVTKGDETLRKLEGL 166
VFG+VT+G + K+ L
Sbjct: 121 VFGEVTQGMDVADKIVNL 138
>gi|407798742|ref|ZP_11145645.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Oceaniovalibus guishaninsula JLT2003]
gi|407059090|gb|EKE45023.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Oceaniovalibus guishaninsula JLT2003]
Length = 181
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G I + AP V+ I L G Y+ F RV GF+AQ DV GR M + R
Sbjct: 30 GTIAIELFDDAAPAHVERITTLAERGAYDGVVFHRVIDGFMAQTGDVQYGR---MGQDMR 86
Query: 98 VEAE-----KTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
+ + EFSD RG + M R SDP+SA S F I+ DAPHLDGQY V GK
Sbjct: 87 LAGTGGSDLPDLPAEFSDRPFERGTVGMARSSDPDSANSQFFIMFDDAPHLDGQYTVVGK 146
Query: 153 VTKGDETLRKLEGLPTRKEG 172
VT G + L ++ R EG
Sbjct: 147 VTDGLDVLDAIK----RGEG 162
>gi|407463323|ref|YP_006774640.1| peptidyl-prolyl isomerase [Candidatus Nitrosopumilus koreensis AR1]
gi|407046945|gb|AFS81698.1| peptidyl-prolyl isomerase [Candidatus Nitrosopumilus koreensis AR1]
Length = 158
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
+TN+G+I F P +AP+TV + KL R G Y+ F RV GF+ Q D ++ +
Sbjct: 7 ETNFGNISFKLLPDLAPETVRNFEKLARDGFYDGTLFHRVIPGFMIQGGDP-NTKTDNKS 65
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
V EFS H+RGI+SM R DP+SA S F I+ D+ LD QY VFG+V
Sbjct: 66 SWGMGGPGYNVKAEFSSRSHLRGIVSMARAQDPDSAGSQFFIVTTDSTFLDRQYTVFGEV 125
Query: 154 TKGDETLRKLEGL 166
+G + K+ L
Sbjct: 126 VEGMDIADKIVNL 138
>gi|167043016|gb|ABZ07728.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[uncultured marine microorganism HF4000_ANIW141A21]
Length = 225
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Query: 32 VFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAP 91
V T +G I F P +A V + KL G Y+ F RV GF+ Q D
Sbjct: 70 VIDTKFGRIVIKFLPDLASGHVKNFKKLANDGFYDGTTFHRVIPGFMIQGGDPNSKDDDR 129
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
N+ T+ EFSDV H RGI+SM R SDPNSA S F I++ D+ LDGQY++FG
Sbjct: 130 TNDGLGGPG-YTINAEFSDVSHKRGIVSMARSSDPNSAGSQFFIVVSDSTSLDGQYSIFG 188
Query: 152 KVTKGDETL 160
+V +G E +
Sbjct: 189 EVIEGLEVV 197
>gi|403388568|ref|ZP_10930625.1| peptidyl-prolyl cis-trans isomerase cyclophilin-type [Clostridium
sp. JC122]
Length = 219
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV + L Y+ F RV KGF+ Q D G G P
Sbjct: 64 LYPDLAPNTVRNFISLANSNFYDGLIFHRVIKGFMIQGGDPQGDGTGGPG---------Y 114
Query: 103 TVVGEFSD-------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
T+ GEF + +KH +G+LSM R DP+SA S F I+ APHLD QYA FGKV +
Sbjct: 115 TIKGEFKENGFEQNVLKHEKGVLSMARAQDPDSAGSQFFIMHDTAPHLDDQYAAFGKVVE 174
Query: 156 GDETLRKLEGLPTRK 170
G E + K+ + T K
Sbjct: 175 GLEVVDKIANVETDK 189
>gi|390568852|ref|ZP_10249144.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
terrae BS001]
gi|389939201|gb|EIN01038.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
terrae BS001]
Length = 193
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+ +T+ GDI YP AP+TV + V+ G YN F RV GF
Sbjct: 19 AFAQNGSQAAHPSVLLKTSEGDIRVELYPEKAPKTVANFLDYVKSGQYNGTIFHRVIPGF 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q G + ++ + + +K++ G ++M R SDPNSA + F I
Sbjct: 79 MVQ------GGGYTTSYAEKPTRAPVQLESRNGLKNMTGTIAMARTSDPNSATAQFFINT 132
Query: 138 GDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
D P+ DG YAVFGKVT G + ++K+EG PT G +P ++I + S+
Sbjct: 133 VDNAGLDYPNPDGNGYAVFGKVTSGMDVVKKIEGTPTTSRGPMSDVPQKQIVLQSA 188
>gi|399039354|ref|ZP_10734958.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF122]
gi|398062642|gb|EJL54412.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF122]
Length = 169
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV----G 86
++ +T G++ P VAP+ V I +L R Y+ F RV F+AQ DV G
Sbjct: 11 IILETTKGNVVIQLLPEVAPEHVARIKELAREKAYDGVVFHRVINDFMAQTGDVKFGKKG 70
Query: 87 GRSAPMNEVQRVEAEK-TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G S + +EK + EFS V HVRG SM R +PNSA S F I DAP L+
Sbjct: 71 GESFNPSRAGMGGSEKPDLKAEFSAVSHVRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|291517870|emb|CBK73091.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Butyrivibrio fibrisolvens 16/4]
Length = 173
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 5/140 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP +AP TV++ L+ Y+ F RV GF+ Q D G G
Sbjct: 7 VTIEMENGDIMKAELYPEIAPNTVNNFISLINHNFYDGVIFHRVINGFMLQGGDPDGTGM 66
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E T G +D+KH G+LSM R P+SA S F I+ ++PHLDG YA
Sbjct: 67 GGPG---YSIKGEFTSNGFKNDLKHEPGVLSMARTMFPDSAGSQFFIMHKNSPHLDGDYA 123
Query: 149 VFGKVTKGDETLRKLEGLPT 168
FGK+ +G + + K+ +PT
Sbjct: 124 AFGKIIEGMDIVNKIAEVPT 143
>gi|395778014|ref|ZP_10458527.1| hypothetical protein MCU_00228 [Bartonella elizabethae Re6043vi]
gi|423715939|ref|ZP_17690160.1| hypothetical protein MEE_01357 [Bartonella elizabethae F9251]
gi|395418323|gb|EJF84650.1| hypothetical protein MCU_00228 [Bartonella elizabethae Re6043vi]
gi|395428383|gb|EJF94460.1| hypothetical protein MEE_01357 [Bartonella elizabethae F9251]
Length = 198
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
F +L + SS D L +V GD+ P +AP+ V I KL G YN
Sbjct: 16 FFSLRAVANNFSSASDASL----LVLSLKDGDVIIRLRPDLAPKHVAQIKKLTEEGAYNN 71
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMN-EVQRV----EAEKTVVGEFSDVKHVRGILSMGR 122
F RV GF+AQ DV G+ + +++RV + EFS RG + M R
Sbjct: 72 VVFHRVIPGFMAQTGDVKFGKKGSRDFDLKRVGMGGSNYPNIPAEFSKQPFQRGTVGMAR 131
Query: 123 YSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERIT 182
DP+SA S F I DAP L+GQY + G+V KG + + K++ G P
Sbjct: 132 SQDPDSANSQFFICFDDAPFLNGQYTIVGEVIKGMDIVDKIKKGTASNNGAVTNPD---V 188
Query: 183 IHSS 186
IH++
Sbjct: 189 IHAA 192
>gi|197301573|ref|ZP_03166646.1| hypothetical protein RUMLAC_00299 [Ruminococcus lactaris ATCC
29176]
gi|197299303|gb|EDY33830.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruminococcus
lactaris ATCC 29176]
Length = 172
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ GDI + YP +AP TV++ LV+ G Y+ F RV GF+ Q G G
Sbjct: 6 VTFEMENGDIMKAELYPEIAPNTVNNFVSLVKKGFYDGLIFHRVISGFMIQGGCPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ A+ V +D+ H G+LSM R P+SA S F I+ APHLDG YA
Sbjct: 66 GGPGYSIKGEFAQNGVT---NDLAHDAGVLSMARAMHPDSAGSQFFIMHKKAPHLDGAYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGK+T+G + + K+
Sbjct: 123 AFGKITEGMDVVNKI 137
>gi|440226642|ref|YP_007333733.1| peptidyl prolyl cis-trans isomerase [Rhizobium tropici CIAT 899]
gi|440038153|gb|AGB71187.1| peptidyl prolyl cis-trans isomerase [Rhizobium tropici CIAT 899]
Length = 166
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VG 86
++ +T G + P VAP+ V I +L R Y+ F RV GF+AQ DV VG
Sbjct: 11 LILETTKGQVVIQLLPQVAPEHVARIKELAREKAYDNVVFHRVIDGFMAQTGDVEHGKVG 70
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G +A ++ + EFS HVRG SM R +PNSA S F I DAP L+ Q
Sbjct: 71 GNTARAGTGG--SSKPDLKAEFSATPHVRGTCSMARSQNPNSANSQFFICFTDAPWLNKQ 128
Query: 147 YAVFGKVTKGDETLRKLE-GLPTR 169
Y+V+G+V G E + +++ G P +
Sbjct: 129 YSVWGQVISGMEFVDQIKRGEPVK 152
>gi|433775215|ref|YP_007305682.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Mesorhizobium australicum WSM2073]
gi|433667230|gb|AGB46306.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Mesorhizobium australicum WSM2073]
Length = 195
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 87/187 (46%), Gaps = 17/187 (9%)
Query: 8 FLTLITLIGTASSQE---DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
FL ++ + TAS DP+ ++ GD+ P +AP+ V I KLVR
Sbjct: 9 FLVVLAGLVTASVSAYAADPE---NTMIITLKDGDVTIALRPDLAPKHVAQIKKLVRDHA 65
Query: 65 YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT-------VVGEFSDVKHV-RG 116
Y+ F RV GF+AQ DV G MN+ +A T + EFS +H RG
Sbjct: 66 YDNVAFHRVIDGFMAQTGDVKFGN---MNKGFNAQAVGTGGSDLPDLPAEFSQAEHYKRG 122
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176
++ M R DPNSA S F I+ AP LDGQY + G V G + + K++ G
Sbjct: 123 VVGMARSQDPNSANSQFFIMFAPAPPLDGQYTIVGNVVSGMDLVDKIKKGDEADNGTVTD 182
Query: 177 PTERITI 183
P I +
Sbjct: 183 PDRMIKV 189
>gi|389577104|ref|ZP_10167132.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Eubacterium cellulosolvens 6]
gi|389312589|gb|EIM57522.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Eubacterium cellulosolvens 6]
Length = 172
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GD I+ YP +AP TV++ L++ G Y+ F R+ GF+ Q D G G
Sbjct: 6 VTITMDNGDVIKAELYPEIAPNTVNNFISLIKKGFYDGLTFHRIIAGFMIQGGDPDGNGT 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E + G +D+ H G+LSM R +P+SA S F I+ DA +LDGQYA
Sbjct: 66 GGPG---YSIKGEFSGNGHKNDLSHTPGVLSMARAMNPDSAGSQFFIMHADANYLDGQYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGKV +G + + K+
Sbjct: 123 GFGKVIEGMDAVNKI 137
>gi|406707959|ref|YP_006758311.1| cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
[alpha proteobacterium HIMB59]
gi|406653735|gb|AFS49134.1| cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
[alpha proteobacterium HIMB59]
Length = 185
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 49 APQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRVE---AEKTV 104
AP V I LV G Y+ F RV GF+AQ DV G S + +++R + +
Sbjct: 44 APNHVQQIKDLVAQGKYDGVVFHRVIDGFMAQTGDVQFGNSNSESFDLRRAGTGGSGNNI 103
Query: 105 VGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
EF+D H RG LSM R DPNSA S F I D PHLDGQY V+G+V +G E + ++
Sbjct: 104 NAEFNDTPHKRGTLSMARAQDPNSADSQFFICFDDTPHLDGQYTVWGEVIEGMEFVDMIK 163
Query: 165 GLPTRKEGIFVMPTERITI 183
K G+ P + I +
Sbjct: 164 KGDPIKNGMVDDPDKIIKM 182
>gi|49475753|ref|YP_033794.1| peptidyl prolyl cis-trans isomerase b [Bartonella henselae str.
Houston-1]
gi|49238560|emb|CAF27800.1| Peptidyl prolyl cis-trans isomerase b [Bartonella henselae str.
Houston-1]
Length = 170
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + F+ +AP V I +LVR G Y+ F RV GF+AQ DV G +
Sbjct: 11 LILETTKGRVVIEFFADLAPSHVARIKELVREGAYDNVIFHRVIDGFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ R + + EFS++ H RG +SM R +P+SA S F I +AP LD
Sbjct: 71 GEKFNLSRAGMGGSEKPDLTAEFSNLSHKRGTVSMARSQNPDSANSQFFICFANAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + +++
Sbjct: 131 QYSIWGQVIEGMENIDQIK 149
>gi|83858655|ref|ZP_00952177.1| peptidyl-prolyl cis-trans isomerase [Oceanicaulis sp. HTCC2633]
gi|83853478|gb|EAP91330.1| peptidyl-prolyl cis-trans isomerase [Oceanicaulis sp. HTCC2633]
Length = 150
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+VF GD+ P +AP+ V I +L G Y+ F RV GFVAQ GG
Sbjct: 7 ELVFTLEGGDVVIRLRPDLAPKHVARISELAADGFYDGLTFHRVIDGFVAQ-----GGCP 61
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
N + + + EF+D HVRG +SM R DPNSA S F I L P+LDGQY V
Sbjct: 62 ---NGNGMGGSGQNIPAEFNDEPHVRGTMSMARAMDPNSADSQFFICLDAVPYLDGQYTV 118
Query: 150 FGKVTKGDETLRKL-EGLPTRKEGIFV 175
+G+VT G E + L +G P G V
Sbjct: 119 WGEVTSGMEHVDALPKGEPPANPGKIV 145
>gi|407465782|ref|YP_006776664.1| peptidyl-prolyl isomerase [Candidatus Nitrosopumilus sp. AR2]
gi|407048970|gb|AFS83722.1| peptidyl-prolyl isomerase [Candidatus Nitrosopumilus sp. AR2]
Length = 506
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 1 MLNVIRIFLTLITLIGTAS---SQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIF 57
M + IF I L+ + +Q D QL V +TN G I F+P AP+ V++
Sbjct: 1 MNKIFLIFSLSIILVSFGNYVFAQTDDQL----TVLETNLGTIIIEFFPDDAPKHVENFI 56
Query: 58 KLVRLGCYNTNHFFRVDKGFVAQVAD--------VVGGRSAPMNEVQRVEAEKTVVGEFS 109
LV G Y+ F R+ GF+ Q D G P V EF+
Sbjct: 57 GLVESGFYDGVIFHRIIPGFMIQGGDPNTIDGDPSTWGTGGPSTSVD---------AEFN 107
Query: 110 DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD--ETLRKLEGLP 167
+KH RGI+SM R +DPNS S F I+ D+ LD QY VFG++ + ETL K+ +
Sbjct: 108 TIKHNRGIVSMARSADPNSGGSQFFIVHADSNFLDEQYTVFGRLVTEESFETLDKIAAVQ 167
Query: 168 TRKEGIFVMPTERITIHSSY 187
T+ V E +TI +Y
Sbjct: 168 TKPNDQPVNSAE-VTITKAY 186
>gi|186476150|ref|YP_001857620.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
phymatum STM815]
gi|184192609|gb|ACC70574.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
phymatum STM815]
Length = 193
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 23/181 (12%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+ +T+ GDI YP AP+TV + V+ G YN F RV GF
Sbjct: 19 AFAQNGSQAAHPSVLLKTSEGDIRVELYPEKAPKTVANFLDYVKSGQYNGTIFHRVIPGF 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFS-----DVKHVRGILSMGRYSDPNSAASS 132
+ Q GG + AEK S +K++ G ++M R SDPNSA +
Sbjct: 79 MIQ----GGGYTTSF-------AEKPTRAPISLESRNGLKNMTGTIAMARTSDPNSATAQ 127
Query: 133 FSILLGDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHS 185
F I D P+ DG YAVFGKVT G + ++K+EG PT G +P +++ I S
Sbjct: 128 FFINTVDNAGLDYPNPDGNGYAVFGKVTAGMDVVKKIEGTPTASRGPMSDVPQKQVVIQS 187
Query: 186 S 186
+
Sbjct: 188 A 188
>gi|398828330|ref|ZP_10586531.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Phyllobacterium sp. YR531]
gi|398218365|gb|EJN04875.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Phyllobacterium sp. YR531]
Length = 192
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRSAPMNEVQ 96
GD++ P +AP+ V+ I L + G YN F RV GF+AQ DV G N+
Sbjct: 39 GDVKVELLPDLAPKHVEQIKALAKEGAYNNVVFHRVIPGFMAQTGDVQYGNTEKGYNQSA 98
Query: 97 RVEAEKT---VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
T + EFS VRG++ M R +PNSA S F I+ + P L+GQY V GKV
Sbjct: 99 AGTGGSTRPDIPAEFSKEPFVRGVVGMARSQNPNSANSQFFIMFTEYPSLNGQYTVVGKV 158
Query: 154 TKGDETLRKLE 164
T G E + K++
Sbjct: 159 TSGMEAVDKIK 169
>gi|373115192|ref|ZP_09529369.1| hypothetical protein HMPREF0995_00205 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670667|gb|EHO35745.1| hypothetical protein HMPREF0995_00205 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 173
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 68/127 (53%), Gaps = 14/127 (11%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N G + YP VAP TV++ LV+ G YN F RV GF+ Q GG
Sbjct: 13 NGGKMVAELYPEVAPNTVNNFISLVQSGFYNGLIFHRVIPGFMIQ-----GGCPN---GN 64
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
++ GEFS +KH RG+LSM R +PNSA S F I++ APHLDG+YA
Sbjct: 65 GMGGPGYSIRGEFSHNGVQNSLKHDRGVLSMARAMNPNSAGSQFFIMVEKAPHLDGEYAA 124
Query: 150 FGKVTKG 156
FGKV +G
Sbjct: 125 FGKVIEG 131
>gi|153009509|ref|YP_001370724.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
anthropi ATCC 49188]
gi|151561397|gb|ABS14895.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Ochrobactrum
anthropi ATCC 49188]
Length = 196
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 82/172 (47%), Gaps = 11/172 (6%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSAR-----VVFQTNYGDIEFGFYPSVAPQTVDHI 56
++ IR L + I A SQ Q SA VV + GD+ P +AP+ V I
Sbjct: 1 MSFIRSALAAVAFI--ALSQGAVQTASAANAENTVVLKLKDGDVAIQLRPDLAPKHVAQI 58
Query: 57 FKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVK 112
KLV G YN F RV GF+AQ DV G + RV + + EFS
Sbjct: 59 EKLVGEGAYNGVAFHRVIPGFMAQTGDVKFGNVDKGFDASRVGTGGSDYPDIPAEFSKEP 118
Query: 113 HVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
VRG + M R +PNSA S F I+ D L+GQY V GKV G + + K++
Sbjct: 119 FVRGTVGMARSQNPNSANSQFFIMFADGAFLNGQYTVVGKVVSGMDIVDKIK 170
>gi|365845396|ref|ZP_09386168.1| putative peptidyl-prolyl cis-trans isomerase B [Flavonifractor
plautii ATCC 29863]
gi|364560419|gb|EHM38358.1| putative peptidyl-prolyl cis-trans isomerase B [Flavonifractor
plautii ATCC 29863]
Length = 173
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 68/127 (53%), Gaps = 14/127 (11%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N G + YP VAP TV++ LV+ G YN F RV GF+ Q GG
Sbjct: 13 NGGKMVAELYPEVAPNTVNNFINLVQSGFYNGLIFHRVIPGFMIQ-----GGCPN---GN 64
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
++ GEFS +KH RG+LSM R +PNSA S F I++ APHLDG+YA
Sbjct: 65 GMGGPGYSIRGEFSHNGVQNSLKHDRGVLSMARAMNPNSAGSQFFIMVEKAPHLDGEYAA 124
Query: 150 FGKVTKG 156
FGKV +G
Sbjct: 125 FGKVIEG 131
>gi|227822131|ref|YP_002826102.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
fredii NGR234]
gi|227341131|gb|ACP25349.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Sinorhizobium fredii NGR234]
Length = 169
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +L R G Y+ F RV + F+AQ DV G++
Sbjct: 11 IIMETTKGRVVIELRPDVAPGHVARIKELSREGAYDGVVFHRVIEDFMAQTGDVQYGKTG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS+V HVRG SM R PNSA S F I DAP L+
Sbjct: 71 GEHFNPARAGMGGSSKPDLKAEFSEVSHVRGTCSMARSQMPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY+V+G+V +G + + +++ G P R
Sbjct: 131 QYSVWGQVIEGMDIIDQIKRGEPVR 155
>gi|28210402|ref|NP_781346.1| peptidyl-prolyl cis-trans isomerase [Clostridium tetani E88]
gi|28202839|gb|AAO35283.1| peptidyl-prolyl cis-trans isomerase [Clostridium tetani E88]
Length = 172
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 38 GDIEFG-FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEV 95
GD+ G YP +AP TV + L+ G Y+ F RV GFV Q G G P
Sbjct: 13 GDVMKGELYPEIAPNTVRNFISLIDKGFYDGLIFHRVIPGFVIQGGCPEGTGVGGPG--- 69
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++ E + G + +KH G+LSM R P+SA S F I++G++PHLDGQYA FGK+T+
Sbjct: 70 YSIKGEFSANGFPNSLKHEEGVLSMARAMSPDSAGSQFFIMVGESPHLDGQYAGFGKITE 129
Query: 156 GDETLRKLEGLPT 168
G + K+ PT
Sbjct: 130 GLDVAFKIVEQPT 142
>gi|424835837|ref|ZP_18260496.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium sporogenes PA 3679]
gi|365977707|gb|EHN13805.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium sporogenes PA 3679]
Length = 172
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAP 91
+N +++ YP +AP TV++ LV G YN F RV GF+ Q GG +
Sbjct: 10 SNGKEMKIELYPEIAPNTVNNFISLVNKGFYNGIIFHRVIPGFMIQ-----GGCPNGNGM 64
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
++ E G +++KH G++SM R PNSA S F I++ DAPHLD QYA FG
Sbjct: 65 GGPGYSIKGEFKSNGFNNELKHTEGVISMARTMQPNSAGSQFFIMVDDAPHLDNQYAAFG 124
Query: 152 KVTKGDETLRKL 163
KV +G + +++
Sbjct: 125 KVIEGLDVAKEI 136
>gi|291562012|emb|CBL40825.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[butyrate-producing bacterium SS3/4]
Length = 175
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMN 93
TN I+ YP VAP TV++ LV G YN F RV KGF+ Q G G P
Sbjct: 14 TNGDIIKAELYPDVAPNTVNNFLSLVNKGFYNGLIFHRVIKGFMIQGGCPDGNGMGGPG- 72
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
++ E + G +D+ H G+LSM R +PNSA S F I+ DAP+L+G+YA FG+V
Sbjct: 73 --YCIKGEFSHNGFQNDLAHTEGVLSMARAMNPNSAGSQFFIMHKDAPYLNGEYAAFGQV 130
Query: 154 TKGDETLRKL 163
G + + K+
Sbjct: 131 IDGMDIVNKI 140
>gi|160942793|ref|ZP_02090034.1| hypothetical protein FAEPRAM212_00270 [Faecalibacterium prausnitzii
M21/2]
gi|158445958|gb|EDP22961.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Faecalibacterium prausnitzii M21/2]
gi|295103861|emb|CBL01405.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Faecalibacterium prausnitzii SL3/3]
Length = 158
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAPMNE 94
G I+ VAP T ++ KLV+ G YN F RV GF+ Q GG +
Sbjct: 10 GIIDIELNEEVAPITCENFKKLVKEGFYNGLTFHRVIPGFMIQ-----GGCPLGTGTGGP 64
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E G + +KH RG++SM R +PNSA S F I+ DAPHLDGQYA FGKV
Sbjct: 65 GWNIKGEFAANGVNNPLKHTRGVISMARSMNPNSAGSQFFIMHQDAPHLDGQYAAFGKVV 124
Query: 155 KGDETLRKLEGLPTRKEGIFVMPTERITI 183
G + + K+ + T P + T+
Sbjct: 125 AGMDVVDKIAAVRTDWNDKPTTPVKMATV 153
>gi|91763280|ref|ZP_01265244.1| peptidylprolyl isomerase [Candidatus Pelagibacter ubique HTCC1002]
gi|91717693|gb|EAS84344.1| peptidylprolyl isomerase [Candidatus Pelagibacter ubique HTCC1002]
Length = 184
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
M +I FL L ++ + E+ + + + GD++ + VAP V I +L
Sbjct: 1 MNKLITKFLILFFILTNNTIAEENIM-----ILKLKDGDVKIELFEDVAPNHVKRIKQLA 55
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVG---------EFSDV 111
+ G Y+ F RV GF+AQ DV G S+ + + + +G EFSD+
Sbjct: 56 KDGNYDGVVFHRVIDGFMAQTGDVQFGNSSN----DQFDLRRAGMGGSDLPDLKEEFSDL 111
Query: 112 KHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
H RG LSM R DPNSA S F I +A LD QY VFGKV +G + + K++
Sbjct: 112 PHERGTLSMARSQDPNSANSQFFICFKEASFLDRQYTVFGKVIEGMDLVDKIKRGDQNNN 171
Query: 172 GIFVMPTERIT 182
G P + I+
Sbjct: 172 GSVSNPDKIIS 182
>gi|420252651|ref|ZP_14755754.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Burkholderia sp. BT03]
gi|398054158|gb|EJL46294.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Burkholderia sp. BT03]
Length = 193
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+ +T+ GDI YP AP+TV + V+ G YN F RV GF
Sbjct: 19 AFAQNGSQAAHPSVLLKTSEGDIRVELYPEKAPKTVANFLDYVKSGQYNGTIFHRVIPGF 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q G + ++ + + +K++ G ++M R SDPNSA + F I
Sbjct: 79 MVQ------GGGYTTSYAEKPTRAPIQLESRNGLKNMTGTIAMARTSDPNSATAQFFINT 132
Query: 138 GDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
D P+ DG YAVFGKVT G + ++K+EG PT G +P ++I + S+
Sbjct: 133 VDNAGLDYPNPDGNGYAVFGKVTSGMDVVKKIEGTPTTSRGPMSDVPQKQIVLQSA 188
>gi|357053672|ref|ZP_09114764.1| hypothetical protein HMPREF9467_01736 [Clostridium clostridioforme
2_1_49FAA]
gi|355385298|gb|EHG32350.1| hypothetical protein HMPREF9467_01736 [Clostridium clostridioforme
2_1_49FAA]
Length = 172
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ LV+ G Y+ F RV GF+ Q G G P ++ A+
Sbjct: 20 LYPDIAPNTVNNFISLVKKGYYDGLIFHRVINGFMIQGGCPDGTGMGGPGYSIKGEFAQN 79
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
V +D+ H G+LSM R PNS S F I+ +PHLDG YA FGKVT+G + + K
Sbjct: 80 GVK---NDLVHTEGVLSMARAMHPNSGGSQFFIMHKASPHLDGSYAAFGKVTEGMDVVNK 136
Query: 163 LEGLPT 168
+ G+ T
Sbjct: 137 IAGVRT 142
>gi|148556433|ref|YP_001264015.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sphingomonas
wittichii RW1]
gi|148501623|gb|ABQ69877.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Sphingomonas
wittichii RW1]
Length = 155
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + GD+ P +AP VD I L R G Y+ F RV GF+AQ D
Sbjct: 9 LILTLDGGDVVIALRPDLAPGHVDQIKTLAREGFYDGVVFHRVIDGFMAQGGD------- 61
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + + EFS H+RG+ SM R S+PNSA S F I DA LDGQY V+
Sbjct: 62 PTGTGMGGSEKPNLKAEFSREPHIRGVCSMARSSNPNSANSQFFICFDDARFLDGQYTVW 121
Query: 151 GKVTKGDETLRKL-EGLPTRKEGIFV 175
G V G E + L +G P R G V
Sbjct: 122 GVVESGMEHVDALPKGEPPRAPGKIV 147
>gi|338707469|ref|YP_004661670.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294273|gb|AEI37380.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 155
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 79/144 (54%), Gaps = 10/144 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
++ + GD+ P +AP+ V+ I +L R G Y+ F RV GF+AQ D G G S
Sbjct: 9 LILTLDDGDVTIRLRPDLAPKHVERIKELTREGFYDGVVFHRVIPGFMAQGGDPTGTGMS 68
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+E ++AE FSD KHVRG+ SM R S P+SA S F I DA LD QY+V
Sbjct: 69 G--SEKPDLQAE------FSDAKHVRGVCSMARTSYPHSANSQFFICFDDATFLDRQYSV 120
Query: 150 FGKVTKGDETLRKL-EGLPTRKEG 172
+G+V G E + L +G P K G
Sbjct: 121 WGEVIDGMEHIDALPKGEPPVKPG 144
>gi|295101171|emb|CBK98716.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Faecalibacterium prausnitzii L2-6]
Length = 158
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G I+ AP T ++ KL+ YN F RV F+ Q +G G P
Sbjct: 10 GIIDIELNEEAAPITCENFKKLIGQDFYNGLTFHRVIPNFMIQGGCPLGNGTGGPG---W 66
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
++ E G + +KHVRG++SM R +PNSA S F I+ DAPHLDGQYA FGKV G
Sbjct: 67 NIKGEFAANGVNNPIKHVRGVISMARSMNPNSAGSQFFIMHKDAPHLDGQYAAFGKVVAG 126
Query: 157 DETLRKLEGLPT 168
+ + K+ +PT
Sbjct: 127 MDVVDKIASVPT 138
>gi|424925407|ref|ZP_18348768.1| Peptidyl-prolyl cis-trans isomerase (rotamase) [Pseudomonas
fluorescens R124]
gi|404306567|gb|EJZ60529.1| Peptidyl-prolyl cis-trans isomerase (rotamase) [Pseudomonas
fluorescens R124]
Length = 207
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 75/140 (53%), Gaps = 9/140 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T G++ +P +AP V+ I KL + Y+ +F RV GF+AQ G RS
Sbjct: 11 IVMETTKGNVLIELFPDLAPNHVERIKKLTQEHYYDGCNFHRVIGGFMAQT----GYRS- 65
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ + EFS KH+RG SM R SDP+SA F I D+P DGQY V+
Sbjct: 66 ---DKHFGSGYGFLKSEFSKSKHLRGTCSMSRKSDPDSADCEFFICFEDSPVSDGQYTVW 122
Query: 151 GKVTKGDETLRKLE-GLPTR 169
GKV +G E + +LE G P R
Sbjct: 123 GKVIEGMENIDRLERGDPVR 142
>gi|393767156|ref|ZP_10355707.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Methylobacterium sp. GXF4]
gi|392727419|gb|EIZ84733.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Methylobacterium sp. GXF4]
Length = 182
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VG 86
V +T G I P +AP+ V I LV G Y+ F RV GF+AQ D G
Sbjct: 28 VYLETKDGRITIALRPDLAPKHVKQIKTLVSQGFYDGLKFHRVIDGFMAQTGDPKGNGTG 87
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G S P + AE + EF RG + M R SDPNSA S F I LGDAP L+ Q
Sbjct: 88 GSSLP-----NIPAEFSQTAEFR-----RGTVGMARSSDPNSANSQFFICLGDAPFLNKQ 137
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI 181
Y V G VT G + L K++ G V ++I
Sbjct: 138 YTVVGNVTDGLDVLDKIKKAAPGAPGGAVQDPDKI 172
>gi|283769423|ref|ZP_06342321.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Bulleidia
extructa W1219]
gi|283103948|gb|EFC05333.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Bulleidia
extructa W1219]
Length = 157
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V+ N G I+ + AP+TV++ LV+ G YN F R+ GF+ Q D +G
Sbjct: 3 VIEMDNGGVIKIKLDVNAAPKTVENFESLVKKGFYNGLTFHRIIPGFMIQGGDPLGNGMG 62
Query: 91 PMNEVQRVEAEKTVVGEFSD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
+E ++GEF+ + H RG++SM R DPNSA+S F I+ DA +LD
Sbjct: 63 --------GSETNIIGEFASNGIQNPLPHKRGVISMARSQDPNSASSQFFIMHADASYLD 114
Query: 145 GQYAVFGKVTKGDETLRKLEGLPT 168
G YA FGKV G + + ++ PT
Sbjct: 115 GHYAAFGKVVDGMDVVDEIAMTPT 138
>gi|150014925|ref|YP_001307179.1| peptidyl-prolyl isomerase [Clostridium beijerinckii NCIMB 8052]
gi|149901390|gb|ABR32223.1| Peptidylprolyl isomerase [Clostridium beijerinckii NCIMB 8052]
Length = 174
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G I+ YP AP TV + L+ G Y+ F RV F+ Q G G P
Sbjct: 12 NGGVIKAELYPEAAPNTVRNFVDLINRGFYDGLIFHRVIPNFMIQGGCPEGTGVGGPG-- 69
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E T G + +KH RG+LSM R P+SA S F I++ DAPHLDGQYA FGKV
Sbjct: 70 -YSIKGEFTGNGFKNTLKHTRGVLSMARAMHPDSAGSQFFIMVADAPHLDGQYASFGKVI 128
Query: 155 KGDETLRKL 163
+G E K+
Sbjct: 129 EGMEVADKI 137
>gi|15888985|ref|NP_354666.1| peptidyl prolyl cis-trans isomerase [Agrobacterium fabrum str. C58]
gi|15156769|gb|AAK87451.1| peptidyl prolyl cis-trans isomerase [Agrobacterium fabrum str. C58]
Length = 169
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +LV G Y+ F RV + F+AQ DV G+
Sbjct: 11 IIMETTTGKVVIQLLPEVAPGHVARIKELVSEGAYDGVVFHRVIEDFMAQTGDVKFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS + HVRG SM R PNSA S F I D+P L+
Sbjct: 71 SESFNPARAGMGGSEKEDLKAEFSAIPHVRGTCSMARSQSPNSANSQFFICFTDSPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY V+G+V +G E + K++ G P +
Sbjct: 131 QYTVWGQVIEGMEAIDKIKRGEPVK 155
>gi|289449744|ref|YP_003475750.1| putative peptidyl-prolyl cis-trans isomerase B [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289184291|gb|ADC90716.1| putative peptidyl-prolyl cis-trans isomerase B [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 171
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP AP TV + L G Y+ F RV KGF+ Q G G P ++ E
Sbjct: 18 LYPEKAPNTVRNFAYLANKGFYDGLIFHRVIKGFMIQGGCPDGTGMGGPG---YHIKGEF 74
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
+ G +D++H RG+LSM R P+SA S F I+ APHLDGQYA FG+VT G ET+ K
Sbjct: 75 SRNGFANDLRHSRGVLSMARAMSPDSAGSQFFIMHAAAPHLDGQYAAFGQVTDGMETVDK 134
Query: 163 L 163
+
Sbjct: 135 I 135
>gi|257784822|ref|YP_003180039.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Atopobium
parvulum DSM 20469]
gi|257473329|gb|ACV51448.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Atopobium
parvulum DSM 20469]
Length = 240
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
R+V + +YG IE +VAP TV + LV G YN F R+ GF+ Q D G S
Sbjct: 82 RIVVK-DYGTIEATLNANVAPITVSNFAHLVESGFYNGLTFHRIIDGFMIQGGDPKGNGS 140
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+++ E T G +D+ H RG +SM R DPNSA+S F I+ D L+G YA
Sbjct: 141 G--GSENKIKGEFTKNGVENDISHTRGTISMARAQDPNSASSQFFIMQADNSTLNGNYAA 198
Query: 150 FGKVTKGDETLRKL--EGLPTRKEG 172
FG VT G + + + PT G
Sbjct: 199 FGTVTSGMDVVDAICKGATPTDSNG 223
>gi|163814907|ref|ZP_02206295.1| hypothetical protein COPEUT_01058 [Coprococcus eutactus ATCC 27759]
gi|158449846|gb|EDP26841.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Coprococcus
eutactus ATCC 27759]
Length = 163
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ LV+ G Y+ F RV KGF+ Q D ++ E
Sbjct: 11 LYPDIAPNTVNNFISLVKKGFYDEVIFHRVIKGFMIQGGDPQ--GIGIGGPGYSIKGEFA 68
Query: 104 VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
G +D+ H G+LSM R P+SA S F I+ APHLDG YA FGKV +G + + K+
Sbjct: 69 QNGFKNDLAHTPGVLSMARSMMPDSAGSQFFIMHKAAPHLDGAYAAFGKVIEGLDIVDKI 128
Query: 164 EGLPT 168
+PT
Sbjct: 129 ANVPT 133
>gi|114567939|ref|YP_755093.1| peptidylprolyl isomerase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338874|gb|ABI69722.1| Peptidylprolyl isomerase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 174
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G I+ +P+VAP TV++ L++ G YN F RV GF+ Q G G P
Sbjct: 13 NGGLIKAELFPAVAPNTVNNFISLIKKGFYNGLVFHRVIPGFMIQGGCPQGSGTGGPG-- 70
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E + G + + H RG+LSM R + PNSA S F I++ APHLDG YA FG+V
Sbjct: 71 -YSIKGEFSSNGFPNHLSHERGVLSMARTAVPNSAGSQFFIMVAPAPHLDGDYAAFGQVI 129
Query: 155 KGDETLRKL 163
+G E + ++
Sbjct: 130 EGLEVVDQI 138
>gi|313114616|ref|ZP_07800124.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310623080|gb|EFQ06527.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 158
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
G I+ AP T ++ KLV G YN F RV GF+ Q +G G P
Sbjct: 10 GIIDIELNEEAAPITCENFKKLVSEGFYNGLTFHRVIPGFMIQGGCPLGNGTGGPG---W 66
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
++ E G + +KH RG++SM R +PNSA S F I+ DAPHLDGQYA FGKV G
Sbjct: 67 NIKGEFAANGVNNPLKHTRGVISMARAMNPNSAGSQFFIMHQDAPHLDGQYAAFGKVVAG 126
Query: 157 DETLRKLEGLPT 168
+ + K+ + T
Sbjct: 127 MDVVDKIAAVRT 138
>gi|164687735|ref|ZP_02211763.1| hypothetical protein CLOBAR_01377 [Clostridium bartlettii DSM
16795]
gi|164603509|gb|EDQ96974.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
bartlettii DSM 16795]
Length = 174
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 14/126 (11%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ LV+ G Y+ F RV KGF+ Q GG +
Sbjct: 22 LYPHIAPNTVNNFISLVKDGYYDGIIFHRVIKGFMIQ-----GGCPN---GNGMGGPGYS 73
Query: 104 VVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ GEFS ++KH +G+LSM R PNSA S F I+ APHLDG+YA FG+V +G
Sbjct: 74 IAGEFSSNGFTNNLKHEKGVLSMARTMQPNSAGSQFFIMHARAPHLDGEYAAFGRVIEGL 133
Query: 158 ETLRKL 163
+ + K+
Sbjct: 134 DVVDKI 139
>gi|335036523|ref|ZP_08529850.1| peptidyl prolyl cis-trans isomerase [Agrobacterium sp. ATCC 31749]
gi|333792414|gb|EGL63784.1| peptidyl prolyl cis-trans isomerase [Agrobacterium sp. ATCC 31749]
Length = 169
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +LV G Y+ F RV + F+AQ DV G+
Sbjct: 11 IIMETTTGKVVIQLLPEVAPGHVARIKELVSEGAYDGVVFHRVIEDFMAQTGDVKFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS + HVRG SM R PNSA S F I D+P L+
Sbjct: 71 SESFNPARAGMGGSEKEDLKAEFSAIPHVRGTCSMARSQSPNSANSQFFICFTDSPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY V+G+V +G E + K++ G P +
Sbjct: 131 QYTVWGQVIEGMEAIDKIKRGEPVK 155
>gi|304570561|ref|YP_266399.2| peptidyl-prolyl isomerase [Candidatus Pelagibacter ubique HTCC1062]
Length = 184
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
M +I FL L ++ + E+ + + + GD++ + VAP V I +L
Sbjct: 1 MNKLITKFLILFFILTNNTIAEENIM-----ILKLKDGDVKIELFEDVAPNHVKRIKQLA 55
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVG---------EFSDV 111
+ G Y+ F RV GF+AQ DV G S+ + + + +G EFSD+
Sbjct: 56 KDGKYDGVVFHRVIDGFMAQTGDVQFGNSSN----DQFDLRRAGMGGSDLPDLKEEFSDL 111
Query: 112 KHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
H RG LSM R DPNSA S F I +A LD QY VFGKV +G + + K++
Sbjct: 112 PHERGTLSMARSQDPNSANSQFFICFKEASFLDRQYTVFGKVIEGMDLVDKIKRGDQNNN 171
Query: 172 GIFVMPTERIT 182
G P + I+
Sbjct: 172 GSVSNPDKIIS 182
>gi|222085992|ref|YP_002544524.1| peptidyl prolyl cis-trans isomerase A signal peptide protein
[Agrobacterium radiobacter K84]
gi|398379934|ref|ZP_10538052.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. AP16]
gi|221723440|gb|ACM26596.1| peptidyl prolyl cis-trans isomerase A signal peptide protein
[Agrobacterium radiobacter K84]
gi|397721250|gb|EJK81798.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. AP16]
Length = 190
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
FL L G+A S L + Q G + P VAP+ V I L + G Y+
Sbjct: 11 FLGLAAFAGSAISAAATDL----LTIQLKDGPVVIELMPEVAPKHVAQIEALAKKGAYDN 66
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVG---------EFSDVKHVRGIL 118
F RV GF+AQ DV G N + A K G EFS V RG++
Sbjct: 67 VVFHRVIDGFMAQTGDVQYG-----NTTKGYNAAKAGTGGSDLPNLPAEFSKVPFTRGVI 121
Query: 119 SMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
M R DPNSA S F I+ D L+GQY V GKV G E + K++ R EG
Sbjct: 122 GMARAQDPNSANSQFFIMFADGDFLNGQYTVVGKVVSGMELVDKIK----RGEG 171
>gi|187932397|ref|YP_001884329.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum B str.
Eklund 17B]
gi|187720550|gb|ACD21771.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum B str.
Eklund 17B]
Length = 174
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 8/137 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAPMNE 94
G I+ YP +AP TV + L+ G Y+ F RV GF+ Q GG +
Sbjct: 14 GTIKAELYPEIAPNTVKNFIDLINRGFYDGLIFHRVIPGFMIQ-----GGCPEGTGMGGP 68
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E T G +++KH +G+LSM R P+SA S F +++ +APHLDGQYA FGKV
Sbjct: 69 GYGIKGEFTSNGFKNELKHSKGVLSMARAMHPDSAGSQFFLMVANAPHLDGQYASFGKVI 128
Query: 155 KGDETLRKLEGLPTRKE 171
+G E K+ T ++
Sbjct: 129 EGIEVADKIVATKTDRQ 145
>gi|323483131|ref|ZP_08088523.1| peptidyl-prolyl cis-trans isomerase [Clostridium symbiosum
WAL-14163]
gi|323691426|ref|ZP_08105700.1| peptidylprolyl cis-trans isomerase [Clostridium symbiosum
WAL-14673]
gi|323403551|gb|EGA95857.1| peptidyl-prolyl cis-trans isomerase [Clostridium symbiosum
WAL-14163]
gi|323504569|gb|EGB20357.1| peptidylprolyl cis-trans isomerase [Clostridium symbiosum
WAL-14673]
Length = 172
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 69/131 (52%), Gaps = 14/131 (10%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ LV G Y+ F RV KGF+ Q GG +
Sbjct: 20 LYPEIAPNTVNNFISLVNKGYYDGLIFHRVIKGFMIQ-----GGCPN---GNGMGGPGYS 71
Query: 104 VVGEFSD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ GEFS KH +G+LSM R P+SA S F I+ D+PHLDG YA FGKVT+G
Sbjct: 72 IKGEFSQNGFTNQFKHTKGVLSMARSMAPDSAGSQFFIMHEDSPHLDGAYAAFGKVTEGL 131
Query: 158 ETLRKLEGLPT 168
+ + K+ + T
Sbjct: 132 DVVDKIAAMRT 142
>gi|395793307|ref|ZP_10472712.1| hypothetical protein MEI_01333 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|423713078|ref|ZP_17687338.1| hypothetical protein ME1_00084 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395424704|gb|EJF90884.1| hypothetical protein ME1_00084 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395431621|gb|EJF97639.1| hypothetical protein MEI_01333 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 197
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
+L I F +L + G + ++ + +V GD+ P +AP+ V I KL
Sbjct: 8 VLTCIFCFFSLSAVAGDSYIADNSDV----LVLSLKNGDVVIRLRPDLAPRHVVQIKKLT 63
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRVEAEKT----VVGEFSDVKHVR 115
+ G YN F RV GF+AQ DV G+ + +++RV + + EFS R
Sbjct: 64 KEGAYNNVVFHRVIPGFMAQTGDVQFGKKGSADFDMKRVGTGASNYPNIPAEFSKQPFKR 123
Query: 116 GILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
G + M R DPNSA S F I DA L+GQY V G+V KG + + K++ T G
Sbjct: 124 GTVGMARAQDPNSANSQFFICFDDASFLNGQYTVVGEVIKGMDVVDKIKKGTTSNNG 180
>gi|413958325|ref|ZP_11397564.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
sp. SJ98]
gi|413940905|gb|EKS72865.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
sp. SJ98]
Length = 193
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 2 LNVIRIFLTLITLIGT--ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+ + + L+ LI T A +Q + Q V+F+T GDI+ YP AP+TV +
Sbjct: 1 MKFLMLALSSAALIATTPALAQPNAQAAHPTVLFKTTQGDIKVELYPEKAPKTVANFLDY 60
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILS 119
V+ G Y+ F RV GF+ Q GG S E + + + +K+ G L+
Sbjct: 61 VKSGQYSGTIFHRVIPGFMIQ----GGGYSTSFAE--KPTRAPIPLESKNGLKNATGTLA 114
Query: 120 MGRYSDPNSAASSFSILLGDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEG 172
M R SDPNSA + F I D P DG YAVFGKV G + ++K+EG PT G
Sbjct: 115 MARTSDPNSATAQFFINTVDNAGLDYPSPDGNGYAVFGKVVAGMDVVKKIEGSPTTTRG 173
>gi|302652893|ref|XP_003018286.1| hypothetical protein TRV_07736 [Trichophyton verrucosum HKI 0517]
gi|291181912|gb|EFE37641.1| hypothetical protein TRV_07736 [Trichophyton verrucosum HKI 0517]
Length = 602
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 87/174 (50%), Gaps = 20/174 (11%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
TAS+ + + G++ + T GDI +PSVAP+TV++ R G YN F RV +
Sbjct: 440 TASAAKPAETGTS-AILHTTLGDIHLRLFPSVAPKTVENFVTHSRNGYYNNTIFHRVIRK 498
Query: 77 FVAQVADVVG----GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAAS 131
F+ Q D +G G S E + EFS +KH + LSM + PN+ AS
Sbjct: 499 FMIQAGDPLGDGTGGESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNAS 548
Query: 132 SFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
F I AP LDG + +FG+ KG + + K+E + T KE P E + I S
Sbjct: 549 QFFITTEKAPWLDGNHTIFGRAVKGMDVIHKIENVKTHKE----KPEEDVKIVS 598
>gi|260221168|emb|CBA29463.1| Peptidyl-prolyl cis-trans isomerase [Curvibacter putative symbiont
of Hydra magnipapillata]
Length = 210
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
Q + +VVFQT G+ YP AP+TV++ + V+ YN F RV F+ Q
Sbjct: 44 QEQTTKVVFQTTAGNFTVELYPDRAPKTVENFVQYVKDKHYNGTIFHRVIPNFMVQ---- 99
Query: 85 VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGD----- 139
GG ++ M Q+ + + +K+ RG ++M R SDPNSA + F I + D
Sbjct: 100 GGGFTSAMQ--QKATRAPVPLEANNKLKNDRGTIAMARTSDPNSATAQFFINVVDNQNLN 157
Query: 140 APHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
AP DG Y VFGKV +G +T+ K+ +PT G+F +P I I+S+
Sbjct: 158 APRPDGYGYTVFGKVIQGMDTIDKIRTVPTTSAGMFQDVPQTPIVINSA 206
>gi|416923171|ref|ZP_11932765.1| peptidylprolyl isomerase [Burkholderia sp. TJI49]
gi|325526737|gb|EGD04253.1| peptidylprolyl isomerase [Burkholderia sp. TJI49]
Length = 191
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 89/171 (52%), Gaps = 15/171 (8%)
Query: 25 QLGSARVVFQ--TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
Q +A V Q T+ GDI YP AP+TV + + V+ G YN F RV KGF+ Q
Sbjct: 22 QTATAHPVVQLKTSQGDIRVELYPEKAPKTVANFLEYVKAGQYNGTIFHRVIKGFMIQ-- 79
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-- 140
GG A +E + + + +K++ G ++M R SDPNSA + F I D
Sbjct: 80 --GGGYKANFDE--KPTRAPIPLESKNGLKNLTGTIAMARTSDPNSATAQFFINTVDNAG 135
Query: 141 ---PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
P+ DG YAVFGKV G + ++K+E +PT G +P + +TI S+
Sbjct: 136 LDYPNPDGNGYAVFGKVVSGLDVVKKIEAVPTTSRGPMQDVPAQPVTIESA 186
>gi|188588453|ref|YP_001919513.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum E3 str.
Alaska E43]
gi|251779511|ref|ZP_04822431.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188498734|gb|ACD51870.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum E3 str.
Alaska E43]
gi|243083826|gb|EES49716.1| peptidyl-prolyl cis-trans isomerase [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 174
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 8/137 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAPMNE 94
G I+ YP +AP TV + L+ G Y+ F RV GF+ Q GG +
Sbjct: 14 GTIKAELYPEIAPNTVKNFIDLINRGFYDGLIFHRVIPGFMIQ-----GGCPDGNGMGGP 68
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E T G +++KH +G+LSM R P+SA S F +++ +APHLDGQYA FGKV
Sbjct: 69 GYGIKGEFTSNGFKNELKHSKGVLSMARAMHPDSAGSQFFLMVANAPHLDGQYASFGKVI 128
Query: 155 KGDETLRKLEGLPTRKE 171
+G E K+ T ++
Sbjct: 129 EGIEVADKIVATKTDRQ 145
>gi|291557949|emb|CBL35066.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Eubacterium siraeum V10Sc8a]
Length = 157
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V+ N I+ YP +AP T + KLV+ G Y+ F RV GF+ Q D G
Sbjct: 3 VIEMENGKKIKIELYPEIAPITCANFEKLVKEGFYDGLIFHRVISGFMIQGGDPEGTGMG 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
E ++ E G +++KH RG++SM R P+SA+S F I+ DAPHLDG YA F
Sbjct: 63 GAKE--NIKGEFAQNGVKNNLKHTRGVISMARSMMPDSASSQFFIMHKDAPHLDGSYAAF 120
Query: 151 GKVTKGDETLRKL 163
GKV G + + ++
Sbjct: 121 GKVVDGMDAVDEI 133
>gi|414870859|tpg|DAA49416.1| TPA: hypothetical protein ZEAMMB73_724144 [Zea mays]
Length = 1206
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 38/40 (95%)
Query: 33 FQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFR 72
QTN+GDIEFGF+P VAP+TV+HIFKLVRLGCYNTNHFFR
Sbjct: 1025 LQTNFGDIEFGFFPHVAPKTVEHIFKLVRLGCYNTNHFFR 1064
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 6/73 (8%)
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSVLKR 205
+YAVFG+VTKGD+TL KLE LPTR+EGIFVMP ERI I S+YYY ++ IC + K
Sbjct: 1064 RYAVFGRVTKGDDTLTKLERLPTRREGIFVMPIERINILSTYYYGQQLAIC-----ITKV 1118
Query: 206 RL-TASVIEIERQ 217
RL T+ VI R+
Sbjct: 1119 RLKTSEVISHTRE 1131
>gi|408787170|ref|ZP_11198903.1| peptidyl prolyl cis-trans isomerase [Rhizobium lupini HPC(L)]
gi|424910473|ref|ZP_18333850.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392846504|gb|EJA99026.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. viciae USDA 2370]
gi|408487123|gb|EKJ95444.1| peptidyl prolyl cis-trans isomerase [Rhizobium lupini HPC(L)]
Length = 169
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +LV G Y+ F RV + F+AQ DV G+
Sbjct: 11 IIMETTTGKVVIQLLPEVAPGHVARIKELVSEGAYDGVVFHRVIEDFMAQTGDVKFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS + HVRG SM R +PNSA S F I D+P L+
Sbjct: 71 SESFNPARAGMGGSEKPDLKAEFSAIPHVRGTCSMARSQNPNSANSQFFICFTDSPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY V+G+V +G E + K++ G P +
Sbjct: 131 QYTVWGQVIEGMEAIDKVKRGEPVK 155
>gi|355626232|ref|ZP_09048633.1| hypothetical protein HMPREF1020_02712 [Clostridium sp. 7_3_54FAA]
gi|354820913|gb|EHF05314.1| hypothetical protein HMPREF1020_02712 [Clostridium sp. 7_3_54FAA]
Length = 172
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 69/131 (52%), Gaps = 14/131 (10%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ LV G Y+ F RV KGF+ Q GG +
Sbjct: 20 LYPEIAPNTVNNFISLVNKGYYDGLIFHRVIKGFMIQ-----GGCPN---GNGMGGPGYS 71
Query: 104 VVGEFSD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ GEFS KH +G+LSM R P+SA S F I+ D+PHLDG YA FGKVT+G
Sbjct: 72 IKGEFSQNGFTNQFKHTKGVLSMARSMAPDSAGSQFFIMHEDSPHLDGAYAAFGKVTEGL 131
Query: 158 ETLRKLEGLPT 168
+ + K+ + T
Sbjct: 132 DVVDKIAAMRT 142
>gi|154253492|ref|YP_001414316.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Parvibaculum
lavamentivorans DS-1]
gi|154157442|gb|ABS64659.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Parvibaculum
lavamentivorans DS-1]
Length = 157
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V + +G++ P +AP+ V I +L R G YN F RV GF+AQ D
Sbjct: 11 LVMEIPHGEVIIEMRPDLAPKHVARIKELAREGFYNGVAFHRVIDGFMAQGGDPT----- 65
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ K + EFS HVRGI SM R DPNSA F I GD LD QY V+
Sbjct: 66 ---GTGSGGSGKKIPAEFSKEPHVRGICSMARTQDPNSADCQFFICFGDTRFLDNQYTVW 122
Query: 151 GKVTKGDETLRKLE-GLPTR 169
GKV G + + KL+ G P R
Sbjct: 123 GKVVSGMDAVDKLKRGEPVR 142
>gi|167746140|ref|ZP_02418267.1| hypothetical protein ANACAC_00836 [Anaerostipes caccae DSM 14662]
gi|317473311|ref|ZP_07932606.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
[Anaerostipes sp. 3_2_56FAA]
gi|167654655|gb|EDR98784.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Anaerostipes
caccae DSM 14662]
gi|316899147|gb|EFV21166.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
[Anaerostipes sp. 3_2_56FAA]
Length = 161
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAPM 92
N I+ YP +AP TV++ KLV+ G Y+ F R+ GF+ Q GG +
Sbjct: 12 NGDTIKAELYPDIAPITVENFVKLVKEGFYDGLTFHRIISGFMIQ-----GGCPNGNGTG 66
Query: 93 NEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
++ E ++ G +D+KH G+LSM R P+SA S F I+ +PHLDGQYA FG+
Sbjct: 67 GPGHTIKGEFSMNGVKNDLKHTPGVLSMARSMAPDSAGSQFFIMHKTSPHLDGQYAAFGQ 126
Query: 153 VTKGDETLRKLEGLPT 168
V +G + + KL + T
Sbjct: 127 VIEGMDVVNKLAEVAT 142
>gi|56962523|ref|YP_174249.1| peptidyl-prolyl cis-trans isomerase [Bacillus clausii KSM-K16]
gi|56908761|dbj|BAD63288.1| peptidyl-prolyl cis-trans isomerase [Bacillus clausii KSM-K16]
Length = 211
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 86/181 (47%), Gaps = 27/181 (14%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVF-----------QTNYGDIEFGFYPSVA 49
M V LTL GT S Q + G+ V N G ++ YP +A
Sbjct: 9 MFIVACFLLTLAACGGTDSKQGQNEEGAPDVAVGETETPIVSMEMENGGIVKLELYPEIA 68
Query: 50 PQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEF 108
P+TV++ LV G Y+ F R+ GF+ Q D G G P E++ GEF
Sbjct: 69 PKTVNNFVALVEDGFYDGLTFHRIIPGFMIQGGDPNGDGTGGPGYEIK---------GEF 119
Query: 109 SD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
S+ + H RG++SM R +P+SA S F I+ DA LDG YA FGKV +G + + +
Sbjct: 120 SNNGIDNPLSHERGVISMARTQEPDSAGSQFFIMHEDALDLDGDYAAFGKVIEGMDVVDE 179
Query: 163 L 163
+
Sbjct: 180 I 180
>gi|404319204|ref|ZP_10967137.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
anthropi CTS-325]
Length = 196
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 20 SQEDPQLGSAR-----VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVD 74
SQ Q+ SA VV + GD+ P +AP+ V I KLV G YN F RV
Sbjct: 17 SQGAVQMASAANAENTVVLKLKDGDVAIQLRPDLAPKHVAQIEKLVGEGAYNGVAFHRVI 76
Query: 75 KGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAA 130
GF+AQ DV G + RV + + EFS VRG + M R +PNSA
Sbjct: 77 PGFMAQTGDVKFGNVDKGFDASRVGTGGSDYPDIPAEFSKEPFVRGTVGMARSQNPNSAN 136
Query: 131 SSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
S F I+ D L+GQY V GKV G E + K++
Sbjct: 137 SQFFIMFADGAFLNGQYTVVGKVVSGMEIVDKIK 170
>gi|319898828|ref|YP_004158921.1| peptidyl prolyl cis-trans isomerase [Bartonella clarridgeiae 73]
gi|319402792|emb|CBI76341.1| peptidyl prolyl cis-trans isomerase [Bartonella clarridgeiae 73]
Length = 170
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV-VGGRS 89
++ +T G + + +AP V I +LVR G Y+ F RV F+AQ DV G +
Sbjct: 11 LILETTKGKVIIELFADLAPGHVVRIKELVREGAYDNVVFHRVIDDFMAQTGDVQFGKKD 70
Query: 90 APMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
+ R+ + + EFS + H RG +SM R +PNSA S F I L DAP LD
Sbjct: 71 DEKFNLSRIGIGGSDKPDLKAEFSSLPHKRGTVSMARSQNPNSANSQFFICLADAPWLDR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+++G+V +G E + K++
Sbjct: 131 QYSIWGQVLEGMENIDKIK 149
>gi|254437735|ref|ZP_05051229.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Octadecabacter antarcticus 307]
gi|198253181|gb|EDY77495.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Octadecabacter antarcticus 307]
Length = 168
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + + G + P +AP+ V+ + +LVR G Y+ F RV GF+AQ DV G
Sbjct: 11 ILMELSNGTVTIELLPDIAPKHVERMKELVRSGAYDNVAFHRVIDGFMAQTGDVANGNME 70
Query: 91 PMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ R + + EFS + H RG + R S PNSA S F I GD L+GQ
Sbjct: 71 NDFNIGRAGTGGSDMPDLPAEFSKIPHARGSIGAARSSSPNSANSQFFINFGDNDFLNGQ 130
Query: 147 YAVFGKVTKGDETLRKL 163
Y V+G V+ G E + KL
Sbjct: 131 YTVYGMVSSGMEHVDKL 147
>gi|187924489|ref|YP_001896131.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
phytofirmans PsJN]
gi|187715683|gb|ACD16907.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
phytofirmans PsJN]
Length = 193
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+F+T+ GDI YP AP+TV + V+ G Y+ F RV +GF
Sbjct: 19 AFAQSGSQAAHPSVLFKTSEGDIRVELYPEKAPKTVANFLDYVKSGQYSGTIFHRVIRGF 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q G + ++ + + +K++ G L+M R SDPNSA + F I
Sbjct: 79 MIQ------GGGYTQSFAEKPTRAPIPLESRNGLKNMTGTLAMARTSDPNSATAQFFINT 132
Query: 138 GDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
D P+ DG YAVFGKVT G + ++K+EG PT G + +P + + I S+
Sbjct: 133 VDNAGLDYPNPDGNGYAVFGKVTSGMDVVKKIEGTPTTSRGPMGDVPQKPVVIESA 188
>gi|338974417|ref|ZP_08629778.1| peptidyl-prolyl cis-trans isomerase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338232504|gb|EGP07633.1| peptidyl-prolyl cis-trans isomerase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 155
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA----DVVG 86
++ +T G + P +AP V+HI KLVR G Y+ F RV +GF+AQ G
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVEHIKKLVREGFYDGIAFHRVIEGFMAQTGCPNGTGTG 67
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EF+ HVRG SM R ++P+SA S F I DA LD Q
Sbjct: 68 GSKYP-----------NLKAEFNAEPHVRGTASMARAANPDSANSQFFICFDDARFLDKQ 116
Query: 147 YAVFGKVTKGDETLRKLE 164
Y V+GKVT G E + K++
Sbjct: 117 YTVWGKVTSGMENVDKIK 134
>gi|167754806|ref|ZP_02426933.1| hypothetical protein CLORAM_00310 [Clostridium ramosum DSM 1402]
gi|237735459|ref|ZP_04565940.1| peptidylprolyl isomerase [Mollicutes bacterium D7]
gi|365829846|ref|ZP_09371435.1| hypothetical protein HMPREF1021_00199 [Coprobacillus sp. 3_3_56FAA]
gi|374626550|ref|ZP_09698962.1| hypothetical protein HMPREF0978_02282 [Coprobacillus sp.
8_2_54BFAA]
gi|167704856|gb|EDS19435.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
ramosum DSM 1402]
gi|229381204|gb|EEO31295.1| peptidylprolyl isomerase [Coprobacillus sp. D7]
gi|365264159|gb|EHM93971.1| hypothetical protein HMPREF1021_00199 [Coprobacillus sp. 3_3_56FAA]
gi|373914078|gb|EHQ45911.1| hypothetical protein HMPREF0978_02282 [Coprobacillus sp.
8_2_54BFAA]
Length = 160
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN--EVQRVEAE 101
YP +AP +V++ KL+ + F RV GF+ Q GG N E ++ E
Sbjct: 20 LYPEIAPISVENFLKLIDQDFFAGLIFHRVIPGFMIQG----GGYDKDFNHHEADSIKGE 75
Query: 102 KTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLR 161
G +D+ H RG+LSM R P+SA+S F I+ DAPHLDG YA FGK+T+G E +
Sbjct: 76 FRSNGVANDLLHTRGVLSMARTMVPDSASSQFFIMHADAPHLDGDYAAFGKITEGLEVVD 135
Query: 162 KLEGLP 167
++ P
Sbjct: 136 QIANAP 141
>gi|326789603|ref|YP_004307424.1| peptidyl-prolyl isomerase [Clostridium lentocellum DSM 5427]
gi|326540367|gb|ADZ82226.1| Peptidylprolyl isomerase [Clostridium lentocellum DSM 5427]
Length = 228
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
+YG + YP +AP TV++ L G Y+ F R+ K F+ Q D G G P
Sbjct: 65 DYGTVTLELYPDMAPNTVNNFITLANDGFYDGLTFHRIIKDFMIQGGDPDGIGTGGP--- 121
Query: 95 VQRVEAEKTVVGEFSD-------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
++ GEFS+ + H +G++SM R P+SA S F I+ D P LDG Y
Sbjct: 122 ------GYSIAGEFSNNGYTANTLLHTKGVISMARSMAPDSAGSQFFIMTADTPSLDGNY 175
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
A FGKVT G + + ++ + T P E + I S
Sbjct: 176 AAFGKVTSGLDIIEEIGNVETDSSD---KPIEDVVIES 210
>gi|295094237|emb|CBK83328.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Coprococcus sp. ART55/1]
Length = 172
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ L++ G Y+ F RV KGF+ Q D ++ E +
Sbjct: 20 LYPDIAPNTVNNFISLIKKGFYDGIIFHRVIKGFMIQGGDPQ--GIGIGGPGYSIKGEFS 77
Query: 104 VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
G +D+ H G+LSM R P+SA S F I+ +PHLDG YA FGKV +G + + K+
Sbjct: 78 QNGFKNDLAHTPGVLSMARSMMPDSAGSQFFIMHKTSPHLDGAYAAFGKVIEGLDIVDKI 137
Query: 164 EGLPT 168
+PT
Sbjct: 138 ANVPT 142
>gi|71062792|gb|AAZ21795.1| peptidylprolyl isomerase [Candidatus Pelagibacter ubique HTCC1062]
Length = 159
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + GD++ + VAP V I +L + G Y+ F RV GF+AQ DV G S+
Sbjct: 1 MILKLKDGDVKIELFEDVAPNHVKRIKQLAKDGKYDGVVFHRVIDGFMAQTGDVQFGNSS 60
Query: 91 PMNEVQRVEAEKTVVG---------EFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAP 141
+ + + +G EFSD+ H RG LSM R DPNSA S F I +A
Sbjct: 61 N----DQFDLRRAGMGGSDLPDLKEEFSDLPHERGTLSMARSQDPNSANSQFFICFKEAS 116
Query: 142 HLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERIT 182
LD QY VFGKV +G + + K++ G P + I+
Sbjct: 117 FLDRQYTVFGKVIEGMDLVDKIKRGDQNNNGSVSNPDKIIS 157
>gi|407973228|ref|ZP_11154140.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor indicus C115]
gi|407431069|gb|EKF43741.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor indicus C115]
Length = 195
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + GD+ P +AP+ V I LV+ G Y F RV GF+AQ DV G
Sbjct: 32 MIIKLKGGDVTVALRPDLAPKHVAQIKALVKEGAYKNVAFHRVIDGFMAQTGDVQFGDVE 91
Query: 91 PMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ +RV ++ + EF+ RG + M R +DPNSA S F I+ A HL+GQ
Sbjct: 92 DGFDARRVGTGGSSKPDLPAEFTSASFERGTVGMARSADPNSANSQFFIMFAPASHLNGQ 151
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
Y V G+V KG E + +++ G+ P + +
Sbjct: 152 YTVVGEVEKGMELVDQIKKGDASANGMVQNPDRMLDV 188
>gi|239628546|ref|ZP_04671577.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518692|gb|EEQ58558.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 172
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 14/131 (10%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP VAP TV++ L+ G Y+ F RV GF+ Q GG
Sbjct: 20 LYPEVAPNTVNNFISLINKGFYDGKIFHRVISGFMIQ-----GGCPN---GNGMGGPGYC 71
Query: 104 VVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ GEFS D+KH G+LSM R P+SA S F I+ D+PHLDG YA FGKVT+G
Sbjct: 72 IKGEFSQNRFKNDLKHTPGVLSMARAMAPDSAGSQFFIMHKDSPHLDGSYAAFGKVTEGM 131
Query: 158 ETLRKLEGLPT 168
+ + ++ + T
Sbjct: 132 DIVDRIAAVQT 142
>gi|315499639|ref|YP_004088442.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Asticcacaulis
excentricus CB 48]
gi|315417651|gb|ADU14291.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Asticcacaulis
excentricus CB 48]
Length = 155
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---G 87
++ GD+ P +AP V I +L R G Y+ F RV GF+AQ D G G
Sbjct: 9 LILTLESGDVRIKLRPDLAPNHVARIKELCRQGFYDGIVFHRVIPGFMAQGGDPEGQGYG 68
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
S K + EFS HVRG+ SM R +P+SA S F I DA LDGQY
Sbjct: 69 GSG-----------KKLKAEFSREPHVRGVCSMARSQNPDSADSQFFICFADARFLDGQY 117
Query: 148 AVFGKVTKGDETLRKL-EGLPTRKEGIFV 175
V+G+VT+G E + L +G P R G V
Sbjct: 118 TVWGEVTEGMEHVDALPKGEPPRAPGKIV 146
>gi|158423949|ref|YP_001525241.1| eptidyl-prolyl cis-trans isomerase [Azorhizobium caulinodans ORS
571]
gi|158330838|dbj|BAF88323.1| eptidyl-prolyl cis-trans isomerase [Azorhizobium caulinodans ORS
571]
Length = 194
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 19 SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFV 78
+ + DPQ + T YG + P +AP V+ + L R G YN F RV GF+
Sbjct: 32 APKSDPQ---NTLYLDTAYGRVVIALRPDLAPAHVERLKTLTREGYYNNAPFHRVIDGFM 88
Query: 79 AQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLG 138
AQ D G ++ ++AE FS+ VRG + M R S P+SA S F I
Sbjct: 89 AQTGDGQYGNGTGGSKYPNLKAE------FSNTPFVRGTVGMARASSPDSANSQFFICYA 142
Query: 139 DAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI 181
D+ L+GQY V G+V G E + KL+ P G P +RI
Sbjct: 143 DSSFLNGQYTVVGQVVSGMEFIDKLKKGPKEANGAVPNP-DRI 184
>gi|347532613|ref|YP_004839376.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Roseburia
hominis A2-183]
gi|345502761|gb|AEN97444.1| peptidyl-prolyl cis-trans isomerase cyclophilin-type [Roseburia
hominis A2-183]
Length = 172
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP +AP TV++ L++ G Y+ F RV GF+ Q G G
Sbjct: 6 VTIEMENGDIMKAELYPEIAPNTVNNFISLIQKGYYDGLIFHRVINGFMIQGGCPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P +++ E + G +D+KH G+LSM R P+SA S F I+ +PHLDG YA
Sbjct: 66 GGPGYDIK---GEFSQNGFKNDLKHTEGVLSMARAMHPDSAGSQFFIMHKTSPHLDGAYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGK+T+G + + K+
Sbjct: 123 AFGKITEGMDVVNKI 137
>gi|325293065|ref|YP_004278929.1| peptidyl prolyl cis-trans isomerase [Agrobacterium sp. H13-3]
gi|418408332|ref|ZP_12981648.1| peptidyl prolyl cis-trans isomerase [Agrobacterium tumefaciens 5A]
gi|325060918|gb|ADY64609.1| peptidyl prolyl cis-trans isomerase [Agrobacterium sp. H13-3]
gi|358005246|gb|EHJ97572.1| peptidyl prolyl cis-trans isomerase [Agrobacterium tumefaciens 5A]
Length = 169
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +LV G Y+ F RV + F+AQ DV G+
Sbjct: 11 IIMETTTGKVVIQLLPEVAPGHVARIKELVSEGAYDGVVFHRVIEDFMAQTGDVKFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS + HVRG SM R PNSA S F I D+P L+
Sbjct: 71 SESFNPARAGMGGSEKPDLKAEFSAISHVRGTCSMARSQSPNSANSQFFICFTDSPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY V+G+V +G E + K++ G P +
Sbjct: 131 QYTVWGQVIEGMEAIDKVKRGEPVK 155
>gi|323341604|ref|ZP_08081837.1| peptidyl-prolyl cis-trans isomerase [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|336065671|ref|YP_004560529.1| peptidyl-prolyl cis-trans isomerase [Erysipelothrix rhusiopathiae
str. Fujisawa]
gi|322464029|gb|EFY09222.1| peptidyl-prolyl cis-trans isomerase [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|334295617|dbj|BAK31488.1| peptidyl-prolyl cis-trans isomerase [Erysipelothrix rhusiopathiae
str. Fujisawa]
Length = 159
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
Y +AP+TV + KL+ Y+ F RV GF+ Q G G P E+ E E
Sbjct: 19 LYEDIAPKTVANFVKLIEDKFYDGLIFHRVIPGFMIQGGCPNGTGMGGPGYEI---EGEF 75
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
T G +D+ H +G+LSM R DPNSA S F I+ DAPHLDGQYA FGK+ G
Sbjct: 76 TSNGFKNDLVHSKGVLSMARAMDPNSAGSQFFIMAEDAPHLDGQYASFGKLVDG 129
>gi|90419653|ref|ZP_01227563.1| peptidyl-prolyl cis-trans isomerase [Aurantimonas manganoxydans
SI85-9A1]
gi|90336590|gb|EAS50331.1| peptidyl-prolyl cis-trans isomerase [Aurantimonas manganoxydans
SI85-9A1]
Length = 185
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 86/180 (47%), Gaps = 28/180 (15%)
Query: 5 IRIFLTL---ITLIGTA------SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDH 55
++IF +L ++L TA + DP +V T GDI+ P +AP V+
Sbjct: 1 MKIFASLGLAVSLAATAFAMPASAQSSDPD---NMLVITTKNGDIDIQLRPDLAPSHVER 57
Query: 56 IFKLVRLGCYNTNHFFRVDKGFVAQVADV----VGGRSAPMNEVQRVEAEKTVVGEFSDV 111
I +L + G Y+ F RV +GF+AQ D +GG P + EFSD
Sbjct: 58 IKELAKEGFYDGVVFHRVIEGFMAQTGDPTGTGMGGSDKP-----------DLKAEFSDE 106
Query: 112 KHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL-EGLPTRK 170
RG + M R DPNSA S F I+L D LDGQY V G V G ET+ + +G P +
Sbjct: 107 TFDRGTVGMARSQDPNSANSQFFIMLADGDFLDGQYTVVGDVVSGMETVDAIKKGDPAQN 166
>gi|359408748|ref|ZP_09201216.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[SAR116 cluster alpha proteobacterium HIMB100]
gi|356675501|gb|EHI47854.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[SAR116 cluster alpha proteobacterium HIMB100]
Length = 176
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 15/167 (8%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
L+V+ L ++ SS+ +A +V +T+ G ++ P +AP+ V+ I +LV+
Sbjct: 10 LSVLSAVLGAFIIMSEKSSE------AAVLVLETSKGQVKIEMKPDLAPRHVERITELVK 63
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMG 121
G Y+ F RV GF+AQ D G E + EF+D ++V G + M
Sbjct: 64 DGFYDGIIFHRVIPGFMAQTGDPTGTGMGGSGE--------NLKAEFTDYEYVEGTVGMA 115
Query: 122 RYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL-EGLP 167
R +P+SA S F I HL GQY V+G+V KG + +RK+ EG P
Sbjct: 116 RAMNPDSADSQFFICYEGCGHLTGQYTVWGQVKKGMDVVRKINEGQP 162
>gi|312143845|ref|YP_003995291.1| Peptidylprolyl isomerase [Halanaerobium hydrogeniformans]
gi|311904496|gb|ADQ14937.1| Peptidylprolyl isomerase [Halanaerobium hydrogeniformans]
Length = 173
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNE 94
N +I+ YP A TV++ L YN F RV KGF+ Q G + N
Sbjct: 12 NNGEEIKLELYPEQAENTVNNFIDLAEKDYYNGLKFHRVIKGFMIQGGCPEG--TGTGNP 69
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E G +D+ H RG++SM R +PNSA S F I+ +APHLDGQYA FG+V
Sbjct: 70 GYAIKGEFASNGYDNDLSHTRGVISMARSQNPNSAGSQFFIVHQNAPHLDGQYAAFGEVI 129
Query: 155 KGDETLRKLEGLPT 168
+G + + K+ + T
Sbjct: 130 EGMDAVDKIADVKT 143
>gi|225573323|ref|ZP_03782078.1| hypothetical protein RUMHYD_01514 [Blautia hydrogenotrophica DSM
10507]
gi|225039312|gb|EEG49558.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Blautia
hydrogenotrophica DSM 10507]
Length = 164
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ LV+ G Y+ F RV GF+ Q G G P ++ E
Sbjct: 11 LYPEIAPNTVNNFISLVKKGFYDGLIFHRVINGFMIQGGCPDGTGMGGPG---YSIKGEF 67
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
T G + +KH G+LSM R P+SA S F ++ +PHLDG YA FGKVT+G + + K
Sbjct: 68 TQNGFVNQLKHEPGVLSMARAMHPDSAGSQFFLMHKTSPHLDGSYAAFGKVTEGLDVVNK 127
Query: 163 LEGLPT 168
+ +PT
Sbjct: 128 IAEVPT 133
>gi|222085993|ref|YP_002544525.1| peptidyl prolyl cis-trans isomerase B signal peptide protein
[Agrobacterium radiobacter K84]
gi|398379935|ref|ZP_10538053.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. AP16]
gi|221723441|gb|ACM26597.1| peptidyl prolyl cis-trans isomerase B signal peptide protein
[Agrobacterium radiobacter K84]
gi|397721251|gb|EJK81799.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. AP16]
Length = 166
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VG 86
++ +T G++ P VAP+ V I +L R Y+ F RV GF+AQ DV VG
Sbjct: 11 LILETTKGEVVIQLLPQVAPEHVARIKELAREKAYDGVVFHRVIDGFMAQTGDVEHGKVG 70
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G +A ++ + EFS H+RG SM R +PNSA S F I DA L+ Q
Sbjct: 71 GNTARAGTGG--SSKPDLKAEFSATSHIRGTCSMARSQNPNSANSQFFICFADASWLNKQ 128
Query: 147 YAVFGKVTKGDETLRKLE-GLPTR 169
Y+V+G+V G + + K++ G P +
Sbjct: 129 YSVWGQVISGMDNVDKIKRGEPVK 152
>gi|168183641|ref|ZP_02618305.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum Bf]
gi|237797022|ref|YP_002864574.1| putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Clostridium botulinum Ba4 str. 657]
gi|182673236|gb|EDT85197.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum Bf]
gi|229262739|gb|ACQ53772.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridium botulinum Ba4 str. 657]
Length = 172
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAP 91
+N +++ YP +AP TV++ LV G YN F RV GF+ Q GG +
Sbjct: 10 SNGKEMKIELYPEIAPNTVNNFISLVNKGFYNGVIFHRVIPGFMIQ-----GGCPNGNGM 64
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
++ E G +++KH G++SM R PNSA S F I++ DA HLD QYA FG
Sbjct: 65 GGPGYSIKGEFKSNGFNNELKHTEGVISMARTMQPNSAGSQFFIMVADASHLDNQYAAFG 124
Query: 152 KVTKGDETLRKL 163
KV +G E +++
Sbjct: 125 KVIEGLEVAKEI 136
>gi|227486339|ref|ZP_03916655.1| peptidylprolyl isomerase [Anaerococcus lactolyticus ATCC 51172]
gi|227235750|gb|EEI85765.1| peptidylprolyl isomerase [Anaerococcus lactolyticus ATCC 51172]
Length = 174
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 31 VVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F GD I+ YP +AP TV++ L++ G Y+ F RV K F+ Q D G G
Sbjct: 8 VTFMMENGDVIKAELYPDLAPNTVNNFISLIKKGFYDGLIFHRVIKNFMIQGGDPEGTGM 67
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E G +D+KH RG+LSM R +SA S F I+ D+PHLDG+YA
Sbjct: 68 GGPG---YAIKGEFNQNGFKNDLKHERGVLSMARSFMLDSAGSQFFIMHKDSPHLDGEYA 124
Query: 149 VFGKVTKGDETLRKLEGLPTRKE 171
FGKV +G + + K+ T ++
Sbjct: 125 GFGKVIEGIDVVDKIAETKTDRQ 147
>gi|325662527|ref|ZP_08151130.1| hypothetical protein HMPREF0490_01870 [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086296|ref|ZP_08335376.1| hypothetical protein HMPREF0987_01679 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325471223|gb|EGC74448.1| hypothetical protein HMPREF0490_01870 [Lachnospiraceae bacterium
4_1_37FAA]
gi|330406062|gb|EGG85585.1| hypothetical protein HMPREF0987_01679 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 172
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ GD I+ YP +AP TV++ LV+ G Y+ F RV +GF+ Q G G
Sbjct: 6 VTFEMENGDVIKAELYPEIAPNTVNNFISLVQKGFYDGLIFHRVIRGFMIQGGCPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P +++ E G +++KH G+LSM R P+SA S F I+ +PHLDG YA
Sbjct: 66 GGPGYQIK---GEFKQNGFTNNLKHEPGVLSMARAMHPDSAGSQFFIMHETSPHLDGSYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGKVT G + + K+
Sbjct: 123 AFGKVTDGMDVVNKI 137
>gi|254456168|ref|ZP_05069597.1| peptidylprolyl isomerase [Candidatus Pelagibacter sp. HTCC7211]
gi|207083170|gb|EDZ60596.1| peptidylprolyl isomerase [Candidatus Pelagibacter sp. HTCC7211]
Length = 161
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + GD++ + VAP V I +L G YN F RV GF+AQ DV G S+
Sbjct: 1 MILKLKDGDVKIELFEDVAPNHVKRIKELADSGQYNDVVFHRVIDGFMAQTGDVKFGNSS 60
Query: 91 PMNEVQRVEAE------KTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
N+ A + EFS + H RG LSM R SDP+SA S F I AP LD
Sbjct: 61 S-NDFNLSRAGMGGSDLPDLKQEFSSLPHDRGTLSMARSSDPDSANSQFFICFKPAPFLD 119
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
QY VFGKV +G E + ++ G P + I+ S
Sbjct: 120 RQYTVFGKVLEGMEFVDMIKRGDDSNNGAVSEPDKIISFKS 160
>gi|163868579|ref|YP_001609788.1| peptidyl prolyl cis-trans isomerase [Bartonella tribocorum CIP
105476]
gi|161018235|emb|CAK01793.1| peptidyl prolyl cis-trans isomerase [Bartonella tribocorum CIP
105476]
Length = 200
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 6 RIFLTLITL--------IGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIF 57
RIF L+ + + SS P ++ +V GD+ P +AP+ V I
Sbjct: 4 RIFAVLMCVFCFFSLHAVADNSSSASPTSDASLLVLSLKDGDVIIRLRPDLAPKHVAQIK 63
Query: 58 KLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRV----EAEKTVVGEFSDVK 112
KL G YN F RV GF+AQ DV G+ + +++RV + EFS
Sbjct: 64 KLTEEGAYNNVVFHRVIPGFMAQTGDVKFGKKGSRDFDLKRVGMGGSNYPNIPAEFSKQP 123
Query: 113 HVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
RG + M R DP+SA S F I DA L+GQY V G+V KG + + K++ G
Sbjct: 124 FKRGTVGMARSQDPDSANSQFFICFDDAAFLNGQYTVVGEVIKGMDVVDKIKKGTASNNG 183
Query: 173 IFVMP 177
P
Sbjct: 184 SVTNP 188
>gi|444308472|ref|ZP_21144117.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
intermedium M86]
gi|443488055|gb|ELT50812.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ochrobactrum
intermedium M86]
Length = 194
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
TAS+ E+ VV + GD+ P +AP+ V I KLV G YN F RV G
Sbjct: 23 TASAAEN------TVVLKLKDGDVAIELRPDLAPKHVAQIEKLVGEGAYNGVAFHRVLPG 76
Query: 77 FVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASS 132
F+AQ DV G + RV + + EFS VRG + M R +PNSA S
Sbjct: 77 FMAQTGDVKFGNMDKNFDASRVGTGGSDYPDIPAEFSKEPFVRGTVGMARSQNPNSANSQ 136
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
F I+ D L+GQY V GKV G + + K++
Sbjct: 137 FFIMFADGSFLNGQYTVVGKVVSGMDVVDKIK 168
>gi|409437369|ref|ZP_11264483.1| peptidyl-prolyl cis-trans isomerase B (rotamase B) [Rhizobium
mesoamericanum STM3625]
gi|408750797|emb|CCM75639.1| peptidyl-prolyl cis-trans isomerase B (rotamase B) [Rhizobium
mesoamericanum STM3625]
Length = 169
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV----G 86
++ +T G + P VAP V I +L R Y+ F RV F+AQ DV G
Sbjct: 11 IILETTKGKVVIQLLPEVAPGHVARIKELAREKAYDNVVFHRVINDFMAQTGDVKFGKKG 70
Query: 87 GRSAPMNEVQRVEAEK-TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G S + +EK + EFS V HVRG SM R +PNSA S F I DAP L+
Sbjct: 71 GESFNPSRAGMGGSEKPDLKAEFSAVSHVRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|49475754|ref|YP_033795.1| peptidyl-prolyl cis-trans isomerase b [Bartonella henselae str.
Houston-1]
gi|49238561|emb|CAF27801.1| Peptidyl-prolyl cis-trans isomerase b [Bartonella henselae str.
Houston-1]
Length = 190
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
L V+ + + ++ +D + +V GD+ +AP+ V I KL +
Sbjct: 3 LRVLSVLICFFCFFSLSAVADDSNV----LVLSLKNGDVVIRLRSDLAPKHVAQIKKLTK 58
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRVEAEKT----VVGEFSDVKHVRG 116
G YN F RV GF+AQ DV G+ ++ + +R+ ++ + EFS RG
Sbjct: 59 EGAYNNVVFHRVIPGFMAQTGDVQFGKKGSVDFDPKRIGMGRSNYPNIPAEFSKEPFKRG 118
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176
+ M R DPNSA S F I DA L+GQY V G+V KG + + K++ T G
Sbjct: 119 TVGMARSQDPNSANSQFFICFSDAAFLNGQYTVVGEVIKGMDVVDKIKKGTTSNNGSLTN 178
Query: 177 P 177
P
Sbjct: 179 P 179
>gi|298291667|ref|YP_003693606.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Starkeya
novella DSM 506]
gi|296928178|gb|ADH88987.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Starkeya
novella DSM 506]
Length = 184
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ QT G + F +APQ + I L R G Y+ F RV +GF+AQ D G
Sbjct: 36 IIMQTTKGPVVFVLRADLAPQHAERIKTLAREGYYDNVPFHRVIEGFMAQTGDGQYGNGT 95
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ + AE FS+V RG + M R S PNSA S F I GDA L+GQY V
Sbjct: 96 GGSRYPNLPAE------FSNVPFTRGTVGMARASSPNSANSQFFITFGDASFLNGQYTVI 149
Query: 151 GKVTKGDETLRKLE 164
G+V G E + K++
Sbjct: 150 GQVVSGMENVDKIK 163
>gi|15896024|ref|NP_349373.1| peptidyl-prolyl cis-trans isomerase [Clostridium acetobutylicum
ATCC 824]
gi|337737978|ref|YP_004637425.1| peptidyl-prolyl cis-trans isomerase [Clostridium acetobutylicum DSM
1731]
gi|384459489|ref|YP_005671909.1| Peptidyl-prolyl cis-transisomerase, cyclophilin family [Clostridium
acetobutylicum EA 2018]
gi|15025806|gb|AAK80713.1|AE007774_10 Peptidyl-prolyl cis-transisomerase, cyclophilin family [Clostridium
acetobutylicum ATCC 824]
gi|325510178|gb|ADZ21814.1| Peptidyl-prolyl cis-transisomerase, cyclophilin family [Clostridium
acetobutylicum EA 2018]
gi|336293065|gb|AEI34199.1| peptidyl-prolyl cis-trans isomerase [Clostridium acetobutylicum DSM
1731]
Length = 174
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N I+ YP +AP TV + L+ Y+ F RV GF+ Q D G G P
Sbjct: 12 NGNKIKIELYPHIAPNTVSNFISLINHNFYDGVIFHRVIPGFMIQGGDPDGNGMGGPG-- 69
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
++ E + G +++KH RG++SM R P+SA S F I+ D+PHLDG YA FG+VT
Sbjct: 70 -YAIKGEFSSNGFQNNLKHERGVISMARTGFPDSAGSQFFIMAEDSPHLDGDYAAFGRVT 128
Query: 155 KGDETLRKL 163
+G E + ++
Sbjct: 129 EGIEEVDRI 137
>gi|414173646|ref|ZP_11428273.1| hypothetical protein HMPREF9695_01919 [Afipia broomeae ATCC 49717]
gi|410890280|gb|EKS38079.1| hypothetical protein HMPREF9695_01919 [Afipia broomeae ATCC 49717]
Length = 155
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA----DVVG 86
++ +T G + P +AP V+HI KLVR G Y+ F RV +GF+AQ G
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVEHIKKLVREGFYDGIVFHRVIEGFMAQTGCPQGTGTG 67
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EF+ HVRG SM R ++P+SA S F I DA LD Q
Sbjct: 68 GSKYP-----------NLKAEFNAEPHVRGTASMARAANPDSANSQFFICFDDARFLDKQ 116
Query: 147 YAVFGKVTKGDETLRKLE 164
Y V+GKVT G E + K++
Sbjct: 117 YTVWGKVTSGMENVDKIK 134
>gi|257065953|ref|YP_003152209.1| peptidyl-prolyl isomerase [Anaerococcus prevotii DSM 20548]
gi|256797833|gb|ACV28488.1| Peptidylprolyl isomerase [Anaerococcus prevotii DSM 20548]
Length = 175
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 31 VVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
V F+ GD + YP VAP TV + L+ Y+ F RV KGF+ Q D
Sbjct: 8 VTFEMENGDTFKAELYPEVAPNTVRNFISLIGHNFYDGVIFHRVIKGFMIQGGDPE--GI 65
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
++ E G +++KH RG+LSM R P+SA S F ++ D+PHLDGQYA
Sbjct: 66 GIGGPGYAIKGEFAANGFENNLKHDRGVLSMARSMMPDSAGSQFFVMHKDSPHLDGQYAA 125
Query: 150 FGKVTKGDETLRKL 163
FG+V +G +T+ K+
Sbjct: 126 FGRVIEGMDTVDKI 139
>gi|421588962|ref|ZP_16034179.1| peptidyl-prolyl cis-trans isomerase B [Rhizobium sp. Pop5]
gi|403706209|gb|EJZ21551.1| peptidyl-prolyl cis-trans isomerase B [Rhizobium sp. Pop5]
Length = 169
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP+ V I +L R Y+ F RV F+AQ DV G+
Sbjct: 11 IILETTKGKVVIQLLPQVAPEHVKRIKELARENAYDGVVFHRVIADFMAQTGDVEFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS HVRG SM R +PNSA S F I DAP L+
Sbjct: 71 GENFNPSRAGMGGSSKDDLKAEFSATPHVRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|218672576|ref|ZP_03522245.1| peptidyl prolyl cis-trans isomerase B signal peptide protein
[Rhizobium etli GR56]
Length = 169
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP+ V I +L R Y+ F RV + F+AQ DV G+
Sbjct: 11 IILETTKGKVVIQLLPQVAPEHVARIKELAREKAYDGVVFHRVIQDFMAQTGDVEYGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS HVRG SM R +PNSA S F I DAP L+
Sbjct: 71 SETFNPGRAGMGGSSKPDLKAEFSATSHVRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|86357734|ref|YP_469626.1| peptidyl prolyl cis-trans isomerase B signal peptide protein
[Rhizobium etli CFN 42]
gi|86281836|gb|ABC90899.1| peptidyl prolyl cis-trans isomerase B signal peptide protein
[Rhizobium etli CFN 42]
Length = 169
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP+ V I +L R Y+ F RV + F+AQ DV G+
Sbjct: 11 IILETTKGKVVIQLLPQVAPEHVARIKELAREKAYDGVVFHRVIQDFMAQTGDVEYGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS HVRG SM R +PNSA S F I DAP L+
Sbjct: 71 SETFNPGRAGMGGSSKPDLKAEFSATSHVRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|414166757|ref|ZP_11422989.1| hypothetical protein HMPREF9696_00844 [Afipia clevelandensis ATCC
49720]
gi|410892601|gb|EKS40393.1| hypothetical protein HMPREF9696_00844 [Afipia clevelandensis ATCC
49720]
Length = 155
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA----DVVG 86
++ +T G + P +AP V+HI KLVR G Y+ F RV +GF+AQ G
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVEHIKKLVREGFYDGIVFHRVIEGFMAQTGCPNGTGTG 67
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EF+ HVRG SM R ++P+SA S F I DA LD Q
Sbjct: 68 GSKYP-----------NLKAEFNAEPHVRGTASMARAANPDSANSQFFICFDDARFLDKQ 116
Query: 147 YAVFGKVTKGDETLRKLE 164
Y V+GKVT G E + K++
Sbjct: 117 YTVWGKVTSGMENVDKIK 134
>gi|255283997|ref|ZP_05348552.1| peptidylprolyl cis-trans isomerase, cyclophilin-type [Bryantella
formatexigens DSM 14469]
gi|255265450|gb|EET58655.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Marvinbryantia formatexigens DSM 14469]
Length = 172
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 16/127 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP VAP +V++ L++ G Y+ F RV GF+ Q G G P ++
Sbjct: 20 LYPEVAPNSVNNFISLIKKGFYDGLIFHRVINGFMIQGGCPDGTGMGGPGYSIK------ 73
Query: 103 TVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
GEFS D+KH G+LSM R +PNSA S F I+ APHLDG YA FGKV +G
Sbjct: 74 ---GEFSANHFQNDLKHTEGVLSMARAMNPNSAGSQFFIMHKAAPHLDGSYAAFGKVIEG 130
Query: 157 DETLRKL 163
+ + ++
Sbjct: 131 MDVVNRI 137
>gi|444910680|ref|ZP_21230861.1| Peptidyl-prolyl cis-trans isomerase [Cystobacter fuscus DSM 2262]
gi|444718944|gb|ELW59748.1| Peptidyl-prolyl cis-trans isomerase [Cystobacter fuscus DSM 2262]
Length = 181
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 16 GTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDK 75
G ++ +DP+ ++ +T G + P +AP V I +L R G Y+ F RV +
Sbjct: 9 GKMANIKDPE---NTIIMETTKGKVVIELRPDLAPGHVARIKELTREGAYDGVVFHRVIE 65
Query: 76 GFVAQVADVVGGRSA-----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAA 130
F+AQ DV G+S P ++ + EFS KH RG SM R +PNSA
Sbjct: 66 KFMAQTGDVKFGKSTGPDFNPGRAGMGGSSKPDLKAEFSSAKHGRGACSMARAQNPNSAN 125
Query: 131 SSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
S F I+ DA LD QY V+G+V +G E + K++
Sbjct: 126 SQFFIVFDDASFLDRQYTVWGQVIEGMENVDKIK 159
>gi|417859906|ref|ZP_12504962.1| peptidyl prolyl cis-trans isomerase [Agrobacterium tumefaciens F2]
gi|338822970|gb|EGP56938.1| peptidyl prolyl cis-trans isomerase [Agrobacterium tumefaciens F2]
Length = 169
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +LV G Y+ F RV + F+AQ DV G+
Sbjct: 11 IIMETTTGKVVIQLLPEVAPGHVARIKELVSEGAYDGVVFHRVIEDFMAQTGDVKFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS + HVRG SM R PNSA S F I D+P L+
Sbjct: 71 AESFNPARAGMGGSDKPDLKAEFSAIPHVRGTCSMARSQSPNSANSQFFICFTDSPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY V+G+V +G E + K++ G P +
Sbjct: 131 QYTVWGQVIEGMEAIDKVKRGEPVK 155
>gi|49474364|ref|YP_032406.1| peptidyl-prolyl cis-trans isomerase b [Bartonella quintana str.
Toulouse]
gi|49239868|emb|CAF26266.1| Peptidyl-prolyl cis-trans isomerase b [Bartonella quintana str.
Toulouse]
Length = 196
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
+L I F +L + + + ++ + +V G++ F P +AP+ V I +L
Sbjct: 8 VLTCIFCFFSLSAVADDSKAADNSNI----LVLSLKNGEVVIRFRPDLAPKHVAQIKRLT 63
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRVEAEKT----VVGEFSDVKHVR 115
+ G YN F RV GF+AQ DV G+ N +++RV + + EFS+ R
Sbjct: 64 KEGAYNNVVFHRVIPGFMAQTGDVQFGKKGSANFDLKRVGTGGSNYPNIPAEFSEQPFKR 123
Query: 116 GILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
G + M R +P+SA S F I DA L+GQY V G+V KG + + K++ T G
Sbjct: 124 GTVGMARSQNPDSANSQFFICFNDAVFLNGQYTVVGEVIKGMDVVDKIKKGTTSNNG 180
>gi|218282740|ref|ZP_03488937.1| hypothetical protein EUBIFOR_01523 [Eubacterium biforme DSM 3989]
gi|218216385|gb|EEC89923.1| hypothetical protein EUBIFOR_01523 [Eubacterium biforme DSM 3989]
Length = 191
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
+L ++ F+ I+L G Q++ + A++ + +YG I AP TV + L
Sbjct: 4 LLTILCSFVLCISLFGC---QKETKNYIAKIEVK-DYGTITLKLDGKTAPITVQNFVDLA 59
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD------VKHV 114
+ G Y+ F R+ KGF+ Q D + ++KT+ GEF D +KH
Sbjct: 60 QSGFYDGLTFHRIMKGFMIQGGDPNANGTGG--------SDKTIKGEFKDNGVKNNIKHK 111
Query: 115 RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
RG++SM R SD +SA+S F I+ D LDGQYA FG VTKG + + K+
Sbjct: 112 RGVISMARSSDYDSASSQFFIMQEDNDSLDGQYAAFGHVTKGMKIVDKI 160
>gi|451942142|ref|YP_007462779.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin type [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451901529|gb|AGF75991.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin type [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 197
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
+L + F +L + + + D + +V GD+ P +AP+ V I KL
Sbjct: 8 VLTCLFCFFSLNAIADVSHTAGDSDI----LVLSLKNGDVVIRLRPDLAPRHVVQIKKLT 63
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRVEAEKT----VVGEFSDVKHVR 115
+ G YN F RV GF+AQ DV G+ + +V+RV + + EFS R
Sbjct: 64 KGGAYNNVVFHRVIPGFMAQTGDVQFGKKGSADFDVKRVGTGASNYPNIPAEFSKQPFKR 123
Query: 116 GILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
G + M R DPNSA S F I DA L+GQY V G+V KG + + K++ + G
Sbjct: 124 GTVGMARAQDPNSANSQFFICFDDASFLNGQYTVVGEVIKGMDVVDKIKKGTSSNNG 180
>gi|160937596|ref|ZP_02084957.1| hypothetical protein CLOBOL_02487 [Clostridium bolteae ATCC
BAA-613]
gi|158439665|gb|EDP17415.1| hypothetical protein CLOBOL_02487 [Clostridium bolteae ATCC
BAA-613]
Length = 179
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 21 QEDPQLGSARVVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVA 79
+E ++ + V GD+ + YP +AP TV++ LV+ G Y+ F RV GF+
Sbjct: 3 KEKDKMANPIVTITMENGDVMKAELYPEIAPNTVNNFISLVKKGYYDGLIFHRVINGFMI 62
Query: 80 QVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLG 138
Q G G P ++ A+ V +D+ H G+LSM R PNS S F I+
Sbjct: 63 QGGCPEGTGMGGPGYSIKGEFAQNGVK---NDLVHTEGVLSMARAMHPNSGGSQFFIMHK 119
Query: 139 DAPHLDGQYAVFGKVTKGDETLRKLEGLPT 168
+PHLDG YA FGKVT+G + + K+ + T
Sbjct: 120 ASPHLDGSYAAFGKVTEGMDVVNKIADVQT 149
>gi|337268661|ref|YP_004612716.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Mesorhizobium
opportunistum WSM2075]
gi|336028971|gb|AEH88622.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Mesorhizobium
opportunistum WSM2075]
Length = 195
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
L + FL ++ + TAS ++ GD+ P +AP+ V I KLVR
Sbjct: 3 LKKLASFLVVLAGLVTASVSAHAADPENTMIITLKGGDVTIALRPDLAPKHVAQIKKLVR 62
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHV-RG 116
Y+ F RV GF+AQ DV G Q V + + EFS +H RG
Sbjct: 63 DHAYDNVAFHRVIDGFMAQTGDVKFGNMEKGFNPQAVGTGGSDLPDLPAEFSQTEHYKRG 122
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176
++ M R DPNSA S F I+ AP LDGQY + G V G + + K++ G
Sbjct: 123 VVGMARSQDPNSANSQFFIMFAPAPPLDGQYTIVGNVVSGMDLVDKIKKGDEADNGTVSD 182
Query: 177 PTERITI 183
P I +
Sbjct: 183 PDRMIKV 189
>gi|418935840|ref|ZP_13489592.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhizobium sp.
PDO1-076]
gi|375057457|gb|EHS53629.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhizobium sp.
PDO1-076]
Length = 169
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + +P +AP V+ I +L R G Y+ F RV + F+AQ DV G+
Sbjct: 11 IIMETTKGKVVISLFPDIAPGHVERIKELSREGAYDGVVFHRVIEDFMAQTGDVQYGKQG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS H RG SM R +PNSA S F I DAP L+
Sbjct: 71 GADFNPGRAGMGGSSKPDLKAEFSATNHTRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY+ +G+V +G + + ++ G P R
Sbjct: 131 QYSAWGQVIEGMDVIDTIKRGEPVR 155
>gi|340345791|ref|ZP_08668923.1| Peptidylprolyl isomerase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520932|gb|EGP94655.1| Peptidylprolyl isomerase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 512
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Query: 20 SQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVA 79
+Q D +L V+ TN G+I +P+ AP V + KL G Y+ F R+ GF+
Sbjct: 23 AQSDDKL----VILHTNLGNIVIELFPNDAPNHVQNFIKLAEDGFYDGTIFHRIIPGFMI 78
Query: 80 QVAD--VVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
Q D GG + +V EF+ ++H RGI+SM R DPNSA S F I+
Sbjct: 79 QGGDPNTKGGDQSTWG---TGGPGYSVNAEFNTIEHNRGIVSMARAQDPNSAGSQFFIVH 135
Query: 138 GDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP--TERITIHSSYYYDTE--- 192
D+ LD QY VFG++ +E+ L+ + + K G +P TE++ I + +
Sbjct: 136 KDSNFLDQQYTVFGRIVT-EESFATLDKIASVKTGEKDIPVNTEQVKITKAEVVNRSTVT 194
Query: 193 --MEICEKER 200
+E+ E ER
Sbjct: 195 NLLELSEPER 204
>gi|404251922|ref|ZP_10955890.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sphingomonas
sp. PAMC 26621]
Length = 151
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD+ +APQ V I +L G Y+ F RV GF+AQ D P
Sbjct: 15 GDVVIKLRGDLAPQHVARIAELANDGFYDGVVFHRVIPGFMAQGGD-------PTGTGMH 67
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ + EFS HVRG+ SM R +DPNSA S F I DA LDGQY V+G+VT G
Sbjct: 68 GSDKPNLPAEFSKEPHVRGVASMARTNDPNSANSQFFICFDDARFLDGQYTVWGQVTSGM 127
Query: 158 ETLRKL-EGLPTRKEG 172
E + L +G P R+ G
Sbjct: 128 EHIDALPKGEPPREPG 143
>gi|144899942|emb|CAM76806.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Magnetospirillum gryphiswaldense MSR-1]
Length = 159
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 8/111 (7%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV 105
P +AP+ V I +LVR G Y+ F RV GF+AQ G + Q++EAE
Sbjct: 22 PDLAPKHVARIKELVRQGYYDGLKFHRVIPGFMAQTGCPQG--TGMGGSGQKLEAE---- 75
Query: 106 GEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
FS KHVRG SM R ++PNSA S F I+ APHLD QY+++G+V +G
Sbjct: 76 --FSKEKHVRGTCSMARAANPNSADSQFFIMFDRAPHLDNQYSIWGQVVEG 124
>gi|418296444|ref|ZP_12908288.1| peptidyl prolyl cis-trans isomerase [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539876|gb|EHH09114.1| peptidyl prolyl cis-trans isomerase [Agrobacterium tumefaciens
CCNWGS0286]
Length = 169
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP V I +LV G Y+ F RV + F+AQ DV G+
Sbjct: 11 IIMETTTGKVVIQLLPEVAPGHVARIKELVSEGAYDGVVFHRVIEDFMAQTGDVQFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS + HVRG SM R PNSA S F I D+P L+
Sbjct: 71 SDSFNPARAGMGGSDKPDLKAEFSAIPHVRGTCSMARSQSPNSANSQFFICFTDSPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE-GLPTR 169
QY V+G+V +G E + K++ G P +
Sbjct: 131 QYTVWGQVIEGMEAIDKVKRGEPVK 155
>gi|323136310|ref|ZP_08071392.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Methylocystis
sp. ATCC 49242]
gi|322398384|gb|EFY00904.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Methylocystis
sp. ATCC 49242]
Length = 151
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 70/144 (48%), Gaps = 16/144 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA----DVVG 86
+ +T G + F P +AP V HI KLV G Y+ F RV GF+AQ G
Sbjct: 8 MTLETTKGPVVIKFRPDLAPNHVAHIKKLVSEGFYDGIVFHRVIDGFMAQTGCPRGTGTG 67
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EF+D HVRG SM R DP+SA S F I DA LD Q
Sbjct: 68 GSKYP-----------NLKQEFNDAPHVRGTCSMARAQDPDSANSQFFICFDDARFLDKQ 116
Query: 147 YAVFGKVTKGDETLRKLE-GLPTR 169
Y V+G+V G E + K++ G P R
Sbjct: 117 YTVWGEVVSGMENVDKIKRGEPVR 140
>gi|268608185|ref|ZP_06141912.1| peptidylprolyl isomerase [Ruminococcus flavefaciens FD-1]
Length = 156
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG--- 87
++ N I+ YP +AP + ++ KLV+ G Y+ F RV GF+ Q GG
Sbjct: 3 IIEMENGKKIKIELYPDIAPISCENFEKLVKSGFYDGLTFHRVIPGFMIQ-----GGCPN 57
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
+ ++ E G +D+KH RG+LSM R P+SA S F I+ DAPHLDG Y
Sbjct: 58 GTGTGGPGWHIKGEFASNGVKNDLKHTRGVLSMARSMMPDSAGSQFFIMHEDAPHLDGNY 117
Query: 148 AVFGKVTKGDETLRKL 163
A FGKV +G + + ++
Sbjct: 118 AAFGKVVEGMDVVDEI 133
>gi|253579060|ref|ZP_04856331.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850003|gb|EES77962.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 259
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 83/162 (51%), Gaps = 24/162 (14%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG I+ AP TV + KL + G Y+ F R+ GF+ Q D G +
Sbjct: 106 DYGTIDVELDADTAPITVTNFVKLAQEGFYDGLTFHRIMDGFMIQGGDPNGDGTGG---- 161
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+E+ + GEFS D+ H RG +SM R SDP+SA+S F I+ D+ LDG YA
Sbjct: 162 ----SEENIKGEFSNNGVDNDISHTRGTISMARASDPDSASSQFFIVQADSTFLDGDYAG 217
Query: 150 FGKVTKGDETLRKL--EGLPTRKEGIFVMPT------ERITI 183
FG VT+G + + K+ + PT G +P+ E+ITI
Sbjct: 218 FGHVTEGMDIVDKICEDAKPTDDNG--TIPSDQQPVIEKITI 257
>gi|312116032|ref|YP_004013628.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Rhodomicrobium vannielii ATCC 17100]
gi|311221161|gb|ADP72529.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Rhodomicrobium vannielii ATCC 17100]
Length = 183
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFG-----FYPSVAPQTVDHIFKLVRLG 63
L L+ L+ A+ + SA T Y D++ G P+VAP+ ++ + KLVR G
Sbjct: 5 LMLVALLAVATLGLFARPASAASPENTLYLDLKDGRVVIELLPNVAPKHIERVKKLVREG 64
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRY 123
YN F RV GF+AQ D P + + EF+ RG + R
Sbjct: 65 FYNGLPFHRVITGFMAQTGD-------PKGDGTGGSKYADLPAEFNSTPFKRGTIGAART 117
Query: 124 SDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+PNSA S F I L D PHL+GQY V+G+VT+G
Sbjct: 118 GNPNSANSQFFICLEDTPHLNGQYTVWGRVTEG 150
>gi|451981087|ref|ZP_21929464.1| Peptidylprolyl isomerase [Nitrospina gracilis 3/211]
gi|451761690|emb|CCQ90713.1| Peptidylprolyl isomerase [Nitrospina gracilis 3/211]
Length = 162
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
+ +A V +T +G IE F+ AP V + L + G Y+ F RV GF+ Q D
Sbjct: 1 MANATAVIETVHGTIELEFFEDKAPGHVKNFKDLAQKGFYDGTTFHRVIPGFMIQGGDP- 59
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
R ++ + EF+DV H RG+LSM R DPNSA S F I++ D+ LD
Sbjct: 60 NSRDENRSKHGTGGPGYNIDAEFNDVSHKRGVLSMARAQDPNSAGSQFFIVVKDSTFLDR 119
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
QY FG+VT G + K+ P + P R+ I S
Sbjct: 120 QYTAFGRVTTGMDVADKIVNEPRDQND---NPHNRMEIKS 156
>gi|421467259|ref|ZP_15915895.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
multivorans ATCC BAA-247]
gi|400233838|gb|EJO63346.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
multivorans ATCC BAA-247]
Length = 191
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 88/171 (51%), Gaps = 15/171 (8%)
Query: 25 QLGSARVVFQ--TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
Q +A V Q T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q
Sbjct: 22 QTATAHPVVQLKTSQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ-- 79
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-- 140
GG A +E + ++ + +K++ G ++M R SDPNSA + F I D
Sbjct: 80 --GGGYKANFDE--KPTRAPILLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNSG 135
Query: 141 ---PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
P+ DG YAVFGKV G + ++K+E +PT G +P + + I S+
Sbjct: 136 LDYPNPDGNGYAVFGKVVSGLDVVKKIEAVPTTSRGPMQDVPAQPVVIESA 186
>gi|225851004|ref|YP_002731238.1| peptidyl-prolyl cis-trans isomerase B [Persephonella marina EX-H1]
gi|225646535|gb|ACO04721.1| peptidyl-prolyl cis-trans isomerase B [Persephonella marina EX-H1]
Length = 188
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 94/188 (50%), Gaps = 21/188 (11%)
Query: 7 IFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYN 66
+ TL + + + ++ E+P V +TNYGDI YP AP+TV++ + V+ G YN
Sbjct: 7 VLFTLFSFL-SVNAGENPV-----VKMETNYGDIYIELYPDKAPKTVENFLRYVKEGFYN 60
Query: 67 TNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSD 125
F RV GFV Q GG P + + K VV E + + ++RG ++M R D
Sbjct: 61 GLIFHRVIPGFVIQ-----GGGFYPGMKYKE-PTHKPVVNESDNGLSNLRGTIAMARTQD 114
Query: 126 PNSAASSFSILLGDAPHLD-------GQYAVFGKVTKGDETLRKLEGLPTRKEGIFV-MP 177
P+SA S F I L D LD Y VFGKV KG + + K+ + T G F +P
Sbjct: 115 PHSATSQFYINLKDNTFLDYGRTPQKWGYTVFGKVIKGMDVVDKISMVRTTTVGYFRDVP 174
Query: 178 TERITIHS 185
E + I S
Sbjct: 175 VEPVVIKS 182
>gi|403389261|ref|ZP_10931318.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
sp. JC122]
Length = 173
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAPMNEVQRVEA 100
YP +AP TV + L++ G YN F RV GF+ Q GG ++ N ++
Sbjct: 20 LYPEIAPNTVKNFISLIKKGFYNGLIFHRVIPGFMIQ-----GGCPEKTGAGNPGYSIKG 74
Query: 101 EKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETL 160
E +D+KH G+LSM R +SA F +++ D+PHLDGQYA FGK+T+G +
Sbjct: 75 EFRANNFKNDLKHTPGVLSMARTVVLDSAGCQFFVMVADSPHLDGQYAAFGKLTEGLDVA 134
Query: 161 RKLEGLPTR 169
++ +PT
Sbjct: 135 NEIVSVPTN 143
>gi|395787566|ref|ZP_10467165.1| hypothetical protein ME7_00500 [Bartonella birtlesii LL-WM9]
gi|395411081|gb|EJF77616.1| hypothetical protein ME7_00500 [Bartonella birtlesii LL-WM9]
Length = 198
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 5 IRIFLTLITL-----IGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+R+F LI + + ++ P S ++ GD+ P +AP+ V I +L
Sbjct: 4 LRVFAVLICVFCFFPLSAVANDSKPTDNSNVLILSLKNGDVVIRLRPDLAPKHVAQIKRL 63
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADVVGGRSA-----PMNEVQRVEAEKTVVGEFSDVKHV 114
+ G YN F RV GF+AQ DV G+ P + + EFS+
Sbjct: 64 TKEGAYNNVVFHRVIPGFMAQTGDVKFGKKDSVDFDPKHVGMGGSHYPNIPAEFSEQPFK 123
Query: 115 RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIF 174
RG + M R DPNSA S F I DA L+ QY V G+V KG + + K++ T G
Sbjct: 124 RGTVGMARSQDPNSANSQFFICFDDATFLNNQYTVVGEVIKGMDVVDKIKKGTTSNNGSV 183
Query: 175 VMP 177
P
Sbjct: 184 TNP 186
>gi|110598321|ref|ZP_01386595.1| Peptidylprolyl isomerase [Chlorobium ferrooxidans DSM 13031]
gi|110340019|gb|EAT58520.1| Peptidylprolyl isomerase [Chlorobium ferrooxidans DSM 13031]
Length = 187
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVF-QTNYGDIEFGFYPSVAPQTVDHIFKLV 60
L + + L+ + S P L A ++ G + P +AP+ V I +L
Sbjct: 5 LRTLALMFGLLATLLPLSVYGAPALDRANTIYLDLPAGRVVIRLLPDLAPRHVARIKELT 64
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSM 120
R G Y+ F RV GF+AQ D + + + EFS +H+RG +SM
Sbjct: 65 RKGFYDALSFHRVIPGFMAQTGDPQ--------GDGSGGSGQQLKAEFSRQQHIRGTVSM 116
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTE 179
R SDPNS S F I AP LDGQY ++G+V G E + K+ G+ PT
Sbjct: 117 ARASDPNSGDSQFFICFAPAPFLDGQYTIWGQVVSGMEFVDKVRAGSQFNNGMVSNPTR 175
>gi|83593077|ref|YP_426829.1| peptidyl-prolyl isomerase [Rhodospirillum rubrum ATCC 11170]
gi|83575991|gb|ABC22542.1| Peptidylprolyl isomerase [Rhodospirillum rubrum ATCC 11170]
Length = 168
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 34 QTNYGDIEFG-----FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-G 87
T Y D++ G P +AP+ V+ I LVR G Y+ F RV GF+ Q D G G
Sbjct: 11 NTLYMDLKDGRVVIELRPDLAPKHVERIKLLVRKGFYDGTPFHRVIDGFMVQGGDPTGTG 70
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
R +++ + AE S +H+RG+ SM R +DP+SA S F I+L + HLDGQY
Sbjct: 71 RGG--SDLPDLPAE---FSPPSKARHLRGVTSMARTADPDSANSQFFIMLAPSSHLDGQY 125
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIH 184
++G+VTKG + + ++ +R G P + +
Sbjct: 126 TIWGQVTKGMDFVDMIKKGDSRANGSVSDPDRIVKVQ 162
>gi|315652860|ref|ZP_07905833.1| peptidyl-prolyl cis-trans isomerase [Lachnoanaerobaculum saburreum
DSM 3986]
gi|315484891|gb|EFU75300.1| peptidyl-prolyl cis-trans isomerase [Lachnoanaerobaculum saburreum
DSM 3986]
Length = 172
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV + L+ Y+ F RV K F+ Q G G P ++
Sbjct: 16 IKIELYPEVAPNTVRNFISLINKKFYDGLTFHRVIKDFMIQGGCPQGNGMGGP---DYQI 72
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E ++ G +D+ H RG++SM R + PNSA S F I+ DAPHLDG YA FG V +G +
Sbjct: 73 KGEFSLNGFQNDLAHTRGVISMARATSPNSAGSQFFIMHQDAPHLDGSYAAFGTVIEGMD 132
Query: 159 TLRKLEGLPT 168
+ K+ T
Sbjct: 133 VVDKIASADT 142
>gi|373470990|ref|ZP_09562072.1| putative peptidyl-prolyl cis-trans isomerase B [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
gi|371761323|gb|EHO49952.1| putative peptidyl-prolyl cis-trans isomerase B [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
Length = 200
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV + L+ Y+ F RV GF+ Q G G P ++
Sbjct: 44 IKIELYPEVAPNTVRNFISLINQKFYDGLTFHRVINGFMIQGGCPQGNGMGGP---DYQI 100
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E + G +D+ H RG++SM R PNSA S F I+ DAPHLDG YA FG V +G +
Sbjct: 101 KGEFSQNGFQNDLAHTRGVISMARAMSPNSAGSQFFIMHQDAPHLDGAYAAFGSVIEGMD 160
Query: 159 TLRKLEGLPT 168
+ K+ + T
Sbjct: 161 VVDKIASVDT 170
>gi|240850763|ref|YP_002972163.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin type [Bartonella
grahamii as4aup]
gi|240267886|gb|ACS51474.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin type [Bartonella
grahamii as4aup]
Length = 197
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
F +L + G +S D L +V GD+ P +AP+ V I +L G YN
Sbjct: 15 FFSLFAVAGNSSPASDASL----LVLSLKDGDVIIRLRPDLAPKHVAQIKRLTEEGAYNN 70
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMN-EVQRV----EAEKTVVGEFSDVKHVRGILSMGR 122
F RV F+AQ DV G+ + +++RV + EFS RG + M R
Sbjct: 71 VVFHRVIPNFMAQTGDVKFGKKGSRDFDLKRVGMGGSNYPNIPAEFSKQPFKRGTVGMAR 130
Query: 123 YSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
DP+SA S F I DA L+GQY V G+V KG + + K++ T G
Sbjct: 131 SQDPDSANSQFFICFDDAAFLNGQYTVVGEVIKGMDVVDKIKKGTTSNNG 180
>gi|419718959|ref|ZP_14246253.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Lachnoanaerobaculum saburreum F0468]
gi|383304828|gb|EIC96219.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Lachnoanaerobaculum saburreum F0468]
Length = 172
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV + L+ Y+ F RV K F+ Q G G P ++
Sbjct: 16 IKIELYPEVAPNTVRNFISLINKKFYDGLTFHRVIKDFMIQGGCPQGNGMGGP---DYQI 72
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E ++ G +D+ H RG++SM R + PNSA S F I+ DAPHLDG YA FG V +G +
Sbjct: 73 KGEFSLNGFQNDLAHTRGVISMARTTSPNSAGSQFFIMHQDAPHLDGSYAAFGTVIEGMD 132
Query: 159 TLRKLEGLPT 168
+ K+ T
Sbjct: 133 VVDKIASADT 142
>gi|335419681|ref|ZP_08550730.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Salinisphaera
shabanensis E1L3A]
gi|334896213|gb|EGM34367.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Salinisphaera
shabanensis E1L3A]
Length = 196
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 4 VIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLG 63
++ +F +L A + D + VV TN GDI + AP++ + + VR G
Sbjct: 8 LVTVFFSLALSAPLAFAAGDTSKDDSMVVMHTNLGDITIEVFEDDAPKSAANFLQYVRDG 67
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGR 122
Y+ F RV GFV Q GG + + Q+ + + E + +K+ RG LSM R
Sbjct: 68 FYDGTIFHRVIPGFVIQ----GGGFT---EDYQQKKTRDPITNEADNGLKNDRGTLSMAR 120
Query: 123 YSDPNSAASSFSILLGDAPHL-----DGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM- 176
SDPNSA S F + L D L + YAVFGKVT G + + K+ PT G F
Sbjct: 121 TSDPNSATSQFFVNLTDNAPLNPSRGNAGYAVFGKVTDGMDVVDKIAATPTGSAGPFRQD 180
Query: 177 -PTERITIHSSYYYD 190
P E++ I ++ D
Sbjct: 181 APREQVVIETAEVVD 195
>gi|319783735|ref|YP_004143211.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169623|gb|ADV13161.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 170
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
++ +T G + +P +AP V I +L R G Y+ F RV +GF+AQ DV G S
Sbjct: 11 LIMETTKGTVVIELFPDLAPGHVSRIKELAREGAYDGVVFHRVIEGFMAQTGDVKFGNSS 70
Query: 90 ----APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
AP + + EFS+ H RG SM R +PNSA S F I DA L+
Sbjct: 71 KPSFAPSRAGMGGSEKPDLKAEFSNANHGRGTCSMARSQNPNSANSQFFICFDDAAFLNR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V+G+V +G + + K++
Sbjct: 131 QYTVWGQVIEGMDNVDKIK 149
>gi|402487724|ref|ZP_10834542.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhizobium sp.
CCGE 510]
gi|401813593|gb|EJT05937.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhizobium sp.
CCGE 510]
Length = 169
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V+ +T G I P VAP+ V I +L R Y+ F RV + F+AQ DV G+
Sbjct: 11 VILETTKGKIVIQLLPQVAPEHVARIKELAREKAYDGVVFHRVIQDFMAQTGDVEFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS H RG SM R +PNSA S F I DAP L+
Sbjct: 71 SETFNPGRAGMGGSSKPDLKAEFSATTHTRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|390450967|ref|ZP_10236551.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor aquibiodomus RA22]
gi|389661729|gb|EIM73328.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor aquibiodomus RA22]
Length = 158
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VG 86
+V +T G + +P +AP+ V + +L R Y+ F RV GF+AQ D +G
Sbjct: 11 IVMETTKGKVVIQLFPDIAPEHVKRVKELARDKFYDGIVFHRVIDGFMAQTGDPTGTGMG 70
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EFS++ H RG SM R +PNSA S F I AP LD Q
Sbjct: 71 GSDKP-----------DLKAEFSNMAHERGTCSMARSQNPNSANSQFFICFDKAPWLDRQ 119
Query: 147 YAVFGKVTKGDETLRKLE 164
Y+V+G+VT+G + + +++
Sbjct: 120 YSVWGQVTEGMDCIDRIK 137
>gi|323341906|ref|ZP_08082139.1| peptidyl-prolyl cis-trans isomerase [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322464331|gb|EFY09524.1| peptidyl-prolyl cis-trans isomerase [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 209
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 8 FLTLITLIGTASSQEDPQLGSAR-------------VVFQTNYGDIEFGFYPSVAPQTVD 54
F LI+L G + ++E P+ + + + G I+ YP +AP TV+
Sbjct: 6 FFVLISLTGCSQTKEQPKPDPSSEVQDFSKDTNPIVTIEMEDGGIIKLELYPDIAPNTVN 65
Query: 55 HIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD---- 110
+ KLV Y+ F RV GF+ Q D T+ GEFS
Sbjct: 66 NFIKLVEDSFYDGLLFHRVIPGFMIQGGDP--------KGTGTGGPGYTIKGEFSQNNFD 117
Query: 111 --VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPT 168
+ H RGI+SM R ++A S F I+ DAPHLDG YA FG V +G +T+ ++ + T
Sbjct: 118 NPISHKRGIISMARSKGNDTAGSQFFIVTTDAPHLDGSYAAFGNVVEGMDTVDRIVSVDT 177
Query: 169 RKE 171
++
Sbjct: 178 NQD 180
>gi|118589193|ref|ZP_01546600.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Stappia
aggregata IAM 12614]
gi|118438522|gb|EAV45156.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Stappia
aggregata IAM 12614]
Length = 157
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T+ G + P +AP V I +LVR G Y+ F RV GF+AQ
Sbjct: 11 LLMETSQGPVVIELKPDLAPTHVARIKELVRDGFYDGIVFHRVIDGFMAQTG-------C 63
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + K + EFS+ KHVRG SM R DPNS S F I DAP LDGQY V+
Sbjct: 64 P-QGTGTGGSGKKLKAEFSNEKHVRGTCSMARAMDPNSGDSQFFICFTDAPWLDGQYTVW 122
Query: 151 GKVTKGDETLRKLE 164
G+V +G + + K++
Sbjct: 123 GEVIEGMDNVDKIK 136
>gi|395491114|ref|ZP_10422693.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sphingomonas
sp. PAMC 26617]
Length = 151
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD+ +APQ V I +L G Y+ F RV GF+AQ D P
Sbjct: 15 GDVVIKLRGDLAPQHVARIAELANDGFYDGVVFHRVIPGFMAQGGD-------PTGTGMH 67
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ + EFS HVRG+ SM R +DPNSA S F I DA LDGQY V+G+VT G
Sbjct: 68 GSDKPNLPAEFSKEPHVRGVASMARTNDPNSANSQFFICFDDARFLDGQYTVWGQVTSGM 127
Query: 158 ETLRKL-EGLPTRKEG 172
E + L +G P R G
Sbjct: 128 EHIDALPKGEPPRAPG 143
>gi|336066017|ref|YP_004560875.1| peptidyl-prolyl cis-trans isomerase [Erysipelothrix rhusiopathiae
str. Fujisawa]
gi|334295963|dbj|BAK31834.1| peptidyl-prolyl cis-trans isomerase [Erysipelothrix rhusiopathiae
str. Fujisawa]
Length = 215
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 8 FLTLITLIGTASSQEDPQLGSAR-------------VVFQTNYGDIEFGFYPSVAPQTVD 54
F LI+L G + ++E P+ + + + G I+ YP +AP TV+
Sbjct: 12 FFVLISLTGCSQTKEQPKPDPSSEVQDFSKDTNPIVTIEMEDGGIIKLELYPDIAPNTVN 71
Query: 55 HIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD---- 110
+ KLV Y+ F RV GF+ Q D T+ GEFS
Sbjct: 72 NFIKLVEDSFYDGLLFHRVIPGFMIQGGDP--------KGTGTGGPGYTIKGEFSQNNFD 123
Query: 111 --VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPT 168
+ H RGI+SM R ++A S F I+ DAPHLDG YA FG V +G +T+ ++ + T
Sbjct: 124 NPISHKRGIISMARSKGNDTAGSQFFIVTTDAPHLDGSYAAFGNVVEGMDTVDRIVSVDT 183
Query: 169 RKE 171
++
Sbjct: 184 NQD 186
>gi|116252157|ref|YP_767995.1| peptidyl-prolyl cis-trans isomerase B (cyclophilin-related protein)
[Rhizobium leguminosarum bv. viciae 3841]
gi|424870633|ref|ZP_18294295.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|115256805|emb|CAK07895.1| putative peptidyl-prolyl cis-trans isomerase B (cyclophilin-related
protein) [Rhizobium leguminosarum bv. viciae 3841]
gi|393166334|gb|EJC66381.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 169
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V+ +T G + P VAP+ V I +L R Y+ F RV + F+AQ DV G+
Sbjct: 11 VILETTKGKVVIQLLPQVAPEHVARIKELAREKAYDGVVFHRVIQDFMAQTGDVEFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS H RG SM R +PNSA S F I DAP L+
Sbjct: 71 SETFNPSRAGMGGSSKPDLKAEFSATTHTRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|386875408|ref|ZP_10117582.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Candidatus
Nitrosopumilus salaria BD31]
gi|386806807|gb|EIJ66252.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Candidatus
Nitrosopumilus salaria BD31]
Length = 158
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN 93
+TN+G I F P +AP+TV + KL R G Y+ F RV GF+ Q D ++
Sbjct: 7 ETNFGKISFKLLPELAPETVRNFEKLARDGFYDGTLFHRVIPGFMIQGGDP-NTKTDNKG 65
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
++ EF+ H+RGI+SM R DP+SA S F I+ D+ LD QY VFG+V
Sbjct: 66 SWGMGGPGYSIKAEFNSRSHLRGIVSMARSQDPDSAGSQFFIVTSDSTFLDRQYTVFGEV 125
Query: 154 TKGDETLRKLEGL 166
G + K+ L
Sbjct: 126 IDGMDVADKIVNL 138
>gi|451940774|ref|YP_007461412.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin type [Bartonella
australis Aust/NH1]
gi|451900161|gb|AGF74624.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin type [Bartonella
australis Aust/NH1]
Length = 191
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V G++ P +AP+ VD I KL G YN F RV GF+AQ DV G+
Sbjct: 28 LVLSLKNGNVIIRLRPDLAPKHVDQIKKLTEEGAYNNVVFHRVIPGFMAQTGDVKFGKKG 87
Query: 91 PMN-EVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
++ +++RV A + + EFS RG + M R DPNSA S F I D+P L+
Sbjct: 88 SVDFDLKRVGAGGSNYPNLPAEFSAQPFKRGTVGMARSQDPNSANSQFFICFSDSPFLNS 147
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V G+V +G E + K++
Sbjct: 148 QYTVVGEVIEGIEVVDKIK 166
>gi|302384949|ref|YP_003820771.1| Peptidylprolyl isomerase [Clostridium saccharolyticum WM1]
gi|302195577|gb|ADL03148.1| Peptidylprolyl isomerase [Clostridium saccharolyticum WM1]
Length = 172
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ LV+ G Y+ F RV GF+ Q G G P ++ ++
Sbjct: 20 LYPEIAPNTVNNFISLVKKGYYDGLIFHRVIHGFMIQGGCPEGSGMGGPGYSIKGEFSQN 79
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
V F KH G+LSM R P+SA S F I+ APHLDG YA FGK+++G + + K
Sbjct: 80 GVTNAF---KHTEGVLSMARAMHPDSAGSQFFIMHKAAPHLDGSYAAFGKISEGMDIVNK 136
Query: 163 LEGLPT 168
+ + T
Sbjct: 137 IADVKT 142
>gi|221638905|ref|YP_002525167.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides KD131]
gi|429208439|ref|ZP_19199691.1| Peptidyl-prolyl cis-trans isomerase [Rhodobacter sp. AKP1]
gi|221159686|gb|ACM00666.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type precursor
[Rhodobacter sphaeroides KD131]
gi|428188694|gb|EKX57254.1| Peptidyl-prolyl cis-trans isomerase [Rhodobacter sp. AKP1]
Length = 197
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G++ P VAP V+ + L R G YN F RV +GF+AQ DV G+ N ++R
Sbjct: 52 GEVVIDLLPDVAPAHVERMVTLAREGAYNGVVFHRVIEGFMAQTGDVEFGKG---NNLRR 108
Query: 98 VEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ + EFSDV RG++ M R DPNSA S F I+ L+GQY V G+V
Sbjct: 109 AGTGGSSYPDLPAEFSDVPFTRGVVGMARSDDPNSANSQFFIMFAPGEFLNGQYTVVGRV 168
Query: 154 TKG-DETLRKLEGLPTR 169
+G D R G P R
Sbjct: 169 VQGMDVVDRIARGEPPR 185
>gi|190891761|ref|YP_001978303.1| peptidyl-prolyl cis-trans isomerase B [Rhizobium etli CIAT 652]
gi|218461662|ref|ZP_03501753.1| peptidyl-prolyl cis-trans isomerase B signal peptide protein
[Rhizobium etli Kim 5]
gi|218660413|ref|ZP_03516343.1| peptidyl-prolyl cis-trans isomerase B signal peptide protein
[Rhizobium etli IE4771]
gi|417097331|ref|ZP_11959138.1| peptidyl-prolyl cis-trans isomerase B signal peptide protein
[Rhizobium etli CNPAF512]
gi|190697040|gb|ACE91125.1| peptidyl-prolyl cis-trans isomerase B signal peptide protein
[Rhizobium etli CIAT 652]
gi|327193335|gb|EGE60239.1| peptidyl-prolyl cis-trans isomerase B signal peptide protein
[Rhizobium etli CNPAF512]
Length = 169
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP+ V + +L R Y+ F RV + F+AQ DV G+
Sbjct: 11 IILETTKGKVVIQLLPQVAPEHVARVKELAREKAYDGVVFHRVIQDFMAQTGDVEYGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS HVRG SM R +PNSA S F I DAP L+
Sbjct: 71 SETFNPGRAGMGGSSKPDLKAEFSATPHVRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|94498642|ref|ZP_01305194.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Sphingomonas
sp. SKA58]
gi|94421872|gb|EAT06921.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Sphingomonas
sp. SKA58]
Length = 151
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD+ P +AP V I + + G Y+ F RV GF+AQ D G +
Sbjct: 14 GDVVIKLRPDLAPGHVARIVENTKEGFYDGVVFHRVIPGFMAQGGDPTGTGMGGHPDKPD 73
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
++AE FS HVRG+ SM R S+PNSA S F I DA LDGQY V+G+VT G
Sbjct: 74 LKAE------FSRQPHVRGVCSMARASNPNSANSQFFICFDDATFLDGQYTVWGEVTSGM 127
Query: 158 ETLRKL-EGLPTRKEGIFVMPT 178
E + L +G P R G V T
Sbjct: 128 EHVDALPKGEPPRTPGKIVKAT 149
>gi|358067760|ref|ZP_09154236.1| hypothetical protein HMPREF9333_01117 [Johnsonella ignava ATCC
51276]
gi|356694105|gb|EHI55770.1| hypothetical protein HMPREF9333_01117 [Johnsonella ignava ATCC
51276]
Length = 172
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 26 LGSARVVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
+ + V + GDI + YP AP+TV + L G Y+ F RV +GF+ Q
Sbjct: 1 MNNPMAVIEMENGDIIKAELYPDTAPETVRNFISLANEGFYDGLIFHRVIEGFMIQGGCP 60
Query: 85 VG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
G G P ++ E T G +D++H RG+LSM R +PNSA S F I+ D+PHL
Sbjct: 61 DGTGMGGP---GYSIKGEFTQNGFTNDLRHTRGVLSMARSMNPNSAGSQFFIMHKDSPHL 117
Query: 144 DGQYAVFGKVTKGDETLRKL 163
DG YA FG V +G + + ++
Sbjct: 118 DGAYAGFGMVIEGMDAVDRI 137
>gi|330817523|ref|YP_004361228.1| Peptidyl-prolyl cis-trans isomerase A [Burkholderia gladioli BSR3]
gi|327369916|gb|AEA61272.1| Peptidyl-prolyl cis-trans isomerase A [Burkholderia gladioli BSR3]
Length = 191
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V F+T GDI YP AP+TV + V+ G YN F RV GF+ Q GG A
Sbjct: 30 VQFKTTQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIPGFMIQ----GGGYKA 85
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
+E + + + +K++ G ++M R SDPNSA + F I D P+ DG
Sbjct: 86 NFDE--KPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNSNLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
YAVFGKV G + ++K+E PT G + +P + ITI S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEATPTTSRGSMRDVPEKTITIESA 186
>gi|433775216|ref|YP_007305683.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Mesorhizobium australicum WSM2073]
gi|433667231|gb|AGB46307.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Mesorhizobium australicum WSM2073]
Length = 170
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
++ +T G + +P +AP V I +L R G Y+ F RV +GF+AQ DV G S
Sbjct: 11 LIMETTKGKVVIELFPDLAPGHVARIKELAREGAYDGVVFHRVIEGFMAQTGDVKFGNSS 70
Query: 90 ----APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
AP + + EFS+ H RG SM R +PNSA S F I DA L+
Sbjct: 71 KPSFAPSRAGMGGSEKPDLKAEFSNANHGRGTCSMARSQNPNSANSQFFICFDDAAFLNR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V+G+V +G + + K++
Sbjct: 131 QYTVWGQVIEGMDNVDKIK 149
>gi|409437370|ref|ZP_11264484.1| putative peptidyl-prolyl cis-trans isomerase [Rhizobium
mesoamericanum STM3625]
gi|408750798|emb|CCM75640.1| putative peptidyl-prolyl cis-trans isomerase [Rhizobium
mesoamericanum STM3625]
Length = 189
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L+L + G A +Q L Q G + P VAP+ V I L + G Y+
Sbjct: 12 LSLASFAGGAFAQSGNTL-----TIQLKDGPVVIQLMPEVAPKHVAQIEALAKKGAYDNV 66
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV +GF+AQ DV G + R + + EFS VRG + M R
Sbjct: 67 AFHRVIEGFMAQTGDVKFGNMEKGFDASRAGTGGSDLPDLPAEFSKTPFVRGTVGMARSQ 126
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
DPNSA S F I+ D L+GQY V GKV G E + K++ R EG
Sbjct: 127 DPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK----RGEG 170
>gi|398828331|ref|ZP_10586532.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Phyllobacterium sp. YR531]
gi|398218366|gb|EJN04876.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Phyllobacterium sp. YR531]
Length = 169
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G++ YP +AP V+ I +L R G Y+ F RV GF+AQ DV G+
Sbjct: 10 ILLETTKGNVVIELYPDLAPGHVERIKELAREGAYDGVVFHRVIDGFMAQTGDVKFGKQG 69
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS+ H RG SM R +PNSA S F I DA L+
Sbjct: 70 GSSFNPSRAGMGGSDKPDLKAEFSNANHGRGACSMARSQNPNSANSQFFICFDDAGFLNR 129
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V+G+V +G + + K++
Sbjct: 130 QYTVWGQVIEGMDNVDKIK 148
>gi|328543841|ref|YP_004303950.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Polymorphum
gilvum SL003B-26A1]
gi|326413585|gb|ADZ70648.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Polymorphum
gilvum SL003B-26A1]
Length = 156
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
D G ++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ
Sbjct: 3 DDNNGENTLLMETTQGPVVIEMRPDLAPNHVARIKELVRDGFYDGIVFHRVIDGFMAQTG 62
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
P + + K + EF+ KH RG SM R DPNS S F I DAP
Sbjct: 63 -------CP-HGTGTGGSGKKLRAEFTQEKHKRGTCSMARAMDPNSGDSQFFICFADAPW 114
Query: 143 LDGQYAVFGKVTKGDETLRKLE-GLPTR 169
LDGQY V+G+V +G + + K++ G P R
Sbjct: 115 LDGQYTVWGEVIEGMDNVDKIKRGEPVR 142
>gi|293374989|ref|ZP_06621284.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Turicibacter
sanguinis PC909]
gi|292646399|gb|EFF64414.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Turicibacter
sanguinis PC909]
Length = 185
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP VAPQ+V + L G YN F RV + F+ Q D G G P
Sbjct: 33 LYPEVAPQSVYNFISLANSGFYNGVIFHRVIRSFMIQGGDPQGLGIGGP---------GY 83
Query: 103 TVVGEF------SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ GEF + VKH RG++SM R + PNSA S F I+ D+PHLDG YA FGKV +G
Sbjct: 84 CITGEFKSNGFDNPVKHERGVISMARTNVPNSAGSQFFIMHKDSPHLDGSYAAFGKVIEG 143
Query: 157 DETLRKL 163
+ + ++
Sbjct: 144 IDVVDQI 150
>gi|154247713|ref|YP_001418671.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Xanthobacter
autotrophicus Py2]
gi|154161798|gb|ABS69014.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Xanthobacter
autotrophicus Py2]
Length = 152
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T G + F P +AP V I +LV G Y+ F RV GF+AQ D G
Sbjct: 6 LVLETTKGPVTIAFRPDLAPGHVARIKELVSTGFYDGVPFHRVIDGFMAQTGDPTG---- 61
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ K + EF+ HVRG SM R +P+S S F I GDA LDGQY V+
Sbjct: 62 ----TGMGGSGKKLKAEFNRQPHVRGTCSMARAQNPDSGDSQFFICFGDARFLDGQYTVW 117
Query: 151 GKVTKGDETLRKLE-GLPTR 169
G+V G E + +++ G P +
Sbjct: 118 GEVVSGMENVDQIKRGEPVK 137
>gi|325843370|ref|ZP_08167953.1| putative peptidyl-prolyl cis-trans isomerase B [Turicibacter sp.
HGF1]
gi|325489399|gb|EGC91772.1| putative peptidyl-prolyl cis-trans isomerase B [Turicibacter sp.
HGF1]
Length = 185
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP VAPQ+V + L G YN F RV + F+ Q D G G P ++ E
Sbjct: 33 LYPEVAPQSVYNFISLANSGFYNGVIFHRVIRSFMIQGGDPQGLGIGGPG---YCIKGEF 89
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
G + VKH RG++SM R + PNSA S F I+ D+PHLDG YA FGKV +G + + +
Sbjct: 90 KSNGFDNPVKHERGVISMARTNVPNSAGSQFFIMHKDSPHLDGSYAAFGKVIEGIDVVDQ 149
Query: 163 L 163
+
Sbjct: 150 I 150
>gi|355679186|ref|ZP_09061238.1| hypothetical protein HMPREF9469_04275 [Clostridium citroniae
WAL-17108]
gi|354812251|gb|EHE96870.1| hypothetical protein HMPREF9469_04275 [Clostridium citroniae
WAL-17108]
Length = 172
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 14/131 (10%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ LV G Y+ F RV GF+ Q GG +
Sbjct: 20 LYPQIAPNTVNNFISLVNKGFYDGKIFHRVISGFMIQ-----GGCPN---GNGMGGPGYS 71
Query: 104 VVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ GEFS D+KH G+LSM R P+SA S F I+ +PHLDG YA FGKVT+G
Sbjct: 72 IKGEFSQNGFKNDLKHTAGVLSMARSMMPDSAGSQFFIMHATSPHLDGAYAGFGKVTEGM 131
Query: 158 ETLRKLEGLPT 168
+ + K+ + T
Sbjct: 132 DVVNKIADVQT 142
>gi|429763988|ref|ZP_19296319.1| putative peptidyl-prolyl cis-trans isomerase B [Clostridium celatum
DSM 1785]
gi|429188929|gb|EKY29791.1| putative peptidyl-prolyl cis-trans isomerase B [Clostridium celatum
DSM 1785]
Length = 174
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP +AP TV + LV G Y+ F RV GF+ Q G G
Sbjct: 6 VTIEMENGDIMKAELYPEIAPNTVKNFVDLVNRGFYDGLIFHRVIPGFMIQGGCPEGMGI 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E + G +++KH +G+LSM R P+SA S F I++ +APHLDGQYA
Sbjct: 66 GGPG---YSIKGEFSRNGFKNELKHTKGVLSMARAMHPDSAGSQFFIMVENAPHLDGQYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGK+ +G + K+
Sbjct: 123 AFGKLIEGQDVADKI 137
>gi|16125831|ref|NP_420395.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Caulobacter
crescentus CB15]
gi|221234592|ref|YP_002517028.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000]
gi|13422977|gb|AAK23563.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Caulobacter
crescentus CB15]
gi|220963764|gb|ACL95120.1| peptidyl-prolyl cis-trans isomerase [Caulobacter crescentus NA1000]
Length = 155
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
++ G + P +AP V I +LVR G Y+ F RV GF+AQ D G GR
Sbjct: 9 LILTLESGPVTIKLRPDLAPGHVARIKELVREGFYDGVVFHRVIPGFMAQGGDPSGTGRG 68
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ + EF+D HVRG+ SM R +P+SA S F I+ DA LD QY V
Sbjct: 69 G--------SDKPDLKAEFNDESHVRGVCSMARTPNPDSANSQFFIVFDDATFLDKQYTV 120
Query: 150 FGKVTKGDETLRKL-EGLPTRKEGIFV 175
+G+VT+G E + L +G P R G V
Sbjct: 121 WGQVTEGMEHVDALPKGEPPRAPGKIV 147
>gi|317133194|ref|YP_004092508.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Ethanoligenens harbinense YUAN-3]
gi|315471173|gb|ADU27777.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Ethanoligenens harbinense YUAN-3]
Length = 173
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ--VADVVGGRSAPMN 93
N G I+ A TV++ LV G Y+ F RV GF+ Q D G A N
Sbjct: 13 NGGQIKVELLAEYAKNTVNNFISLVNSGFYDGLIFHRVISGFMIQGGCPDGTGMGGAGYN 72
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ E G + ++H RG++SM R +DP+SA+S F I+ DAPHLDGQYA FGKV
Sbjct: 73 ----IRGEFAANGVDNQLRHGRGVISMARAADPDSASSQFFIVHQDAPHLDGQYAAFGKV 128
Query: 154 TKGDETLRKLEG 165
+G + + K+ G
Sbjct: 129 VEGMDEVDKIAG 140
>gi|266620701|ref|ZP_06113636.1| peptidyl-prolyl cis-trans isomerase [Clostridium hathewayi DSM
13479]
gi|288867695|gb|EFC99993.1| peptidyl-prolyl cis-trans isomerase [Clostridium hathewayi DSM
13479]
Length = 219
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG I P+ AP TV++ L G Y+ F R+ GF+ Q D +G
Sbjct: 66 DYGTISVELNPTYAPITVENFLSLAESGFYDGLTFHRIIDGFMIQGGDPLG--------T 117
Query: 96 QRVEAEKTVVGEFSD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
++ T+ GEFS + H RG +SM R D +SA+S F I+ D+PHLDG YAV
Sbjct: 118 GLGGSDTTIKGEFSSNGVENPLSHTRGAISMARSQDKDSASSQFFIVHQDSPHLDGDYAV 177
Query: 150 FGKVTKGDETLRKL 163
FG VT G + + K+
Sbjct: 178 FGYVTDGMDVVDKI 191
>gi|452752503|ref|ZP_21952245.1| Peptidyl-prolyl cis-trans isomerase [alpha proteobacterium JLT2015]
gi|451960230|gb|EMD82644.1| Peptidyl-prolyl cis-trans isomerase [alpha proteobacterium JLT2015]
Length = 151
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 72/147 (48%), Gaps = 16/147 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---- 86
++ + GD+ P +AP V+ I +L G Y+ F RV GF+AQ D G
Sbjct: 7 LIMSLDDGDVYIRLRPDLAPNHVERIAELAESGFYDGVVFHRVIPGFMAQGGDPTGTGMH 66
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EF+ HVRG SM R DPNSA S F I DA LDGQ
Sbjct: 67 GSDKP-----------DLKAEFNSEPHVRGTCSMARTQDPNSANSQFFICFEDAEFLDGQ 115
Query: 147 YAVFGKVTKGDETLRKL-EGLPTRKEG 172
Y V+G+VT+G E + L +G P + G
Sbjct: 116 YTVWGQVTEGMEHVDALPKGEPPAEPG 142
>gi|424895024|ref|ZP_18318598.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393179251|gb|EJC79290.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 169
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP+ V I +L R Y+ F RV + F+AQ DV G+
Sbjct: 11 IILETTKGKVVIQLLPQVAPEHVARIKELARENAYDGVVFHRVIQDFMAQTGDVEFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS H RG SM R +PNSA S F I DAP L+
Sbjct: 71 SETFNPGRAGMGGSSKPDLKAEFSATTHTRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|315045229|ref|XP_003171990.1| peptidyl-prolyl cis-trans isomerase cyp15 [Arthroderma gypseum CBS
118893]
gi|311344333|gb|EFR03536.1| peptidyl-prolyl cis-trans isomerase cyp15 [Arthroderma gypseum CBS
118893]
Length = 631
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 24 PQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVAD 83
P + T GDI +PSVAP+TV++ R G YN F RV + F+ Q D
Sbjct: 475 PAETGTSAILHTTLGDIHLRLFPSVAPKTVENFVTHSRNGYYNNTIFHRVIRKFMIQAGD 534
Query: 84 VVG----GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLG 138
+G G S E + EFS +KH + LSM + PN+ AS F I
Sbjct: 535 PLGDGTGGESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNASQFFITTE 584
Query: 139 DAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
AP LDG + +FG+ KG + + K+E + T KE P E + I S
Sbjct: 585 KAPWLDGNHTIFGRAVKGMDVIHKIENVKTHKE----KPEEDVKIVS 627
>gi|241204661|ref|YP_002975757.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|424881587|ref|ZP_18305219.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WU95]
gi|240858551|gb|ACS56218.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|392517950|gb|EIW42682.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 169
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V+ +T G + P VAP+ V I +L R Y+ F RV + F+AQ DV G+
Sbjct: 11 VILETTKGKVVIQLLPQVAPEHVARIKELAREKAYDGVVFHRVIQDFMAQTGDVEFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS H RG SM R +PNSA S F I DAP L+
Sbjct: 71 SETFNPGRAGMGGSSKPDLKAEFSATTHTRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|114765963|ref|ZP_01444977.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Pelagibaca
bermudensis HTCC2601]
gi|114541777|gb|EAU44815.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Roseovarius
sp. HTCC2601]
Length = 183
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG------RSAP 91
G + VAP V I L G Y+ F RV GF+AQ DV G R A
Sbjct: 32 GTFHIDLFEDVAPNHVAQITALAEEGAYDGVAFHRVIDGFMAQTGDVQHGKMGSDMRMAG 91
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
M R + + EFSD RG++ M R +PNSA S F I+ APHL+GQY V G
Sbjct: 92 MGGSDRPD----LAAEFSDRDFGRGVVGMARSQNPNSANSQFFIMFAPAPHLNGQYTVVG 147
Query: 152 KVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
+VT G + + ++ R + P + T+
Sbjct: 148 EVTSGMDVVEAIKRGTGRNGAVVGQPDQMATV 179
>gi|395765221|ref|ZP_10445837.1| hypothetical protein MCO_01119 [Bartonella sp. DB5-6]
gi|395413074|gb|EJF79553.1| hypothetical protein MCO_01119 [Bartonella sp. DB5-6]
Length = 191
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V GD+ P +AP+ V I +L + G YN F RV F+AQ DV G+
Sbjct: 28 LVLSLENGDVVIRLRPDLAPKHVAQIKRLTKEGAYNNVVFHRVIPDFMAQTGDVKFGKKG 87
Query: 91 PMN-EVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
N + +RV + + EFS RG + M R DPNSA S F I DA L+G
Sbjct: 88 SENFDPKRVGTGGSNYPNISAEFSKQPFKRGTVGMARAQDPNSANSQFFICFSDAAFLNG 147
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177
QY V G+V KG + + K++ T G P
Sbjct: 148 QYTVVGEVIKGMDVVDKIKKGSTSNNGAVTNP 179
>gi|150396483|ref|YP_001326950.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
medicae WSM419]
gi|150027998|gb|ABR60115.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
medicae WSM419]
Length = 196
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 82/181 (45%), Gaps = 6/181 (3%)
Query: 9 LTLITLIGTA--SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYN 66
L L T G A + Q G + Q G + P +AP+ V I +L G Y+
Sbjct: 12 LALATFTGGAFFAGGAVAQSGENILTVQLKDGPVVIELRPDIAPKHVQQIKELAAAGEYD 71
Query: 67 TNHFFRVDKGFVAQVADVVGGRSAPMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGR 122
F RV KGF+AQ DV G + R ++ + EFSDV RG + M R
Sbjct: 72 NVAFHRVIKGFMAQTGDVEFGDMKDGYQADRAGTGGSSKPDLPAEFSDVPFERGTVGMAR 131
Query: 123 YSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERIT 182
DPNSA S F I+L L+GQY V GKV +G E + K++ G P ++
Sbjct: 132 AQDPNSANSQFFIMLAPGDFLNGQYTVVGKVVEGMENVDKIKLGDDANNGAVADPDRIVS 191
Query: 183 I 183
+
Sbjct: 192 V 192
>gi|407713997|ref|YP_006834562.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia phenoliruptrix
BR3459a]
gi|407236181|gb|AFT86380.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia phenoliruptrix
BR3459a]
Length = 194
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 95/194 (48%), Gaps = 15/194 (7%)
Query: 2 LNVIRIFLTLITLIGTASS--QEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+ + + L LI AS+ Q Q V+ +T+ GDI YP AP+TV +
Sbjct: 1 MKWLMLALGSAALIANASAFAQSGSQAAHPSVLLKTSEGDIRVELYPEKAPKTVANFLDY 60
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILS 119
V+ G Y+ F RV +GF+ Q GG + E + + + +K+ G L+
Sbjct: 61 VKSGQYSGTIFHRVIRGFMIQ----GGGYTQSFAE--KPTRAPIPLESRNGLKNTAGTLA 114
Query: 120 MGRYSDPNSAASSFSILLGDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEG- 172
M R SDPNSA + F I D P+ DG YAVFGKVT G + ++K+E PT G
Sbjct: 115 MARTSDPNSATAQFFINTVDNAGLDYPNPDGNGYAVFGKVTSGMDVVKKIEATPTTTRGP 174
Query: 173 IFVMPTERITIHSS 186
+ +P + I I S+
Sbjct: 175 MGDVPQKPIVIESA 188
>gi|289423444|ref|ZP_06425248.1| peptidyl-prolyl cis-trans isomerase [Peptostreptococcus anaerobius
653-L]
gi|429729240|ref|ZP_19263916.1| putative peptidyl-prolyl cis-trans isomerase B [Peptostreptococcus
anaerobius VPI 4330]
gi|289156202|gb|EFD04863.1| peptidyl-prolyl cis-trans isomerase [Peptostreptococcus anaerobius
653-L]
gi|429145064|gb|EKX88163.1| putative peptidyl-prolyl cis-trans isomerase B [Peptostreptococcus
anaerobius VPI 4330]
Length = 174
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G I+ YP++AP TV++ L+ G Y+ F RV GF+ Q G G P
Sbjct: 14 NGGIIKAELYPNIAPNTVNNFISLINKGYYDGIIFHRVISGFMIQGGCPDGTGMGGPG-- 71
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
+ E T G + ++H RG+LSM R +PNSA S F ++ ++PHLDGQYA FG+V
Sbjct: 72 -YAIAGEFTGNGFANALRHERGVLSMARTMNPNSAGSQFFVMHKNSPHLDGQYASFGRVI 130
Query: 155 KG 156
+G
Sbjct: 131 EG 132
>gi|239831891|ref|ZP_04680220.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Ochrobactrum
intermedium LMG 3301]
gi|239824158|gb|EEQ95726.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Ochrobactrum
intermedium LMG 3301]
Length = 194
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
TAS+ E+ VV + GD+ P +AP+ V I KLV G Y+ F RV G
Sbjct: 23 TASAAEN------TVVLKLKDGDVAIELRPDLAPKHVAQIEKLVGEGAYDGVAFHRVIPG 76
Query: 77 FVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASS 132
F+AQ DV G + RV + + EFS VRG + M R +PNSA S
Sbjct: 77 FMAQTGDVKFGNMDKNFDASRVGTGGSDYPDIPAEFSKEPFVRGTVGMARSQNPNSANSQ 136
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
F I+ D L+GQY V GKV G + + K++
Sbjct: 137 FFIMFADGSFLNGQYTVVGKVVSGMDVVDKIK 168
>gi|56697096|ref|YP_167459.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ruegeria
pomeroyi DSS-3]
gi|56678833|gb|AAV95499.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruegeria
pomeroyi DSS-3]
Length = 181
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGR-SAPMNEVQ 96
G + VAP+ V+ I L G Y+ F RV GF+AQ DV GR M
Sbjct: 30 GTVTIDLLEDVAPKHVEQITALAASGAYDGVVFHRVIDGFMAQTGDVQYGRMGGDMRLAG 89
Query: 97 RVEAEK-TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
R +++ + EFSD+ + RG++ M R DPNSA S F I+ P LDGQY V GKVT
Sbjct: 90 RGGSDRPDLPAEFSDITYERGVVGMARAQDPNSANSQFFIMFAPGPFLDGQYTVVGKVTG 149
Query: 156 GDETLRKLE 164
G + + ++
Sbjct: 150 GMDVVDAIK 158
>gi|357025612|ref|ZP_09087731.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Mesorhizobium
amorphae CCNWGS0123]
gi|355542480|gb|EHH11637.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Mesorhizobium
amorphae CCNWGS0123]
Length = 170
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
++ +T G + P +AP V I +L R G Y+ F RV GF+AQ DV G S
Sbjct: 11 LIMETTKGQVVIELLPDLAPGHVARIKELTREGAYDGVVFHRVIDGFMAQTGDVKFGNSS 70
Query: 90 ----APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
AP + + EFS+ H RG SM R +PNSA S F I DA L+
Sbjct: 71 KPTFAPSRAGMGGSEKPDLKAEFSNANHARGTCSMARAQNPNSANSQFFICFDDAAFLNR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V+G+V +G + + K++
Sbjct: 131 QYTVWGQVIEGMDNVDKIK 149
>gi|161524374|ref|YP_001579386.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
multivorans ATCC 17616]
gi|189350871|ref|YP_001946499.1| peptidylprolyl isomerase [Burkholderia multivorans ATCC 17616]
gi|221198384|ref|ZP_03571430.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
multivorans CGD2M]
gi|221208939|ref|ZP_03581936.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
multivorans CGD2]
gi|421476594|ref|ZP_15924471.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
multivorans CF2]
gi|160341803|gb|ABX14889.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
multivorans ATCC 17616]
gi|189334893|dbj|BAG43963.1| peptidylprolyl isomerase [Burkholderia multivorans ATCC 17616]
gi|221171222|gb|EEE03672.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
multivorans CGD2]
gi|221182316|gb|EEE14717.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
multivorans CGD2M]
gi|400228130|gb|EJO58087.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
multivorans CF2]
Length = 191
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 87/171 (50%), Gaps = 15/171 (8%)
Query: 25 QLGSARVVFQ--TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
Q +A V Q T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q
Sbjct: 22 QTATAHPVVQLKTSQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ-- 79
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-- 140
GG A +E + + + +K++ G ++M R SDPNSA + F I D
Sbjct: 80 --GGGYKANFDE--KPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNSG 135
Query: 141 ---PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
P+ DG YAVFGKV G + ++K+E +PT G +P + + I S+
Sbjct: 136 LDYPNPDGNGYAVFGKVVSGLDVVKKIEAVPTTSRGPMQDVPAQPVVIESA 186
>gi|331091748|ref|ZP_08340580.1| hypothetical protein HMPREF9477_01223 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402647|gb|EGG82214.1| hypothetical protein HMPREF9477_01223 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 172
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ GDI + YP +AP TV++ LV G Y+ F RV +GF+ Q G G
Sbjct: 6 VTFEMESGDIIKAELYPEIAPNTVNNFVSLVNSGYYDGLIFHRVIRGFMIQGGCPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E G + +KH G+LSM R P+SA S F I+ +PHLDG YA
Sbjct: 66 GGP---GYTIKGEFNQNGFSNHLKHEPGVLSMARAMHPDSAGSQFFIMHETSPHLDGSYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGKVT+G + + K+
Sbjct: 123 AFGKVTEGMDIVNKI 137
>gi|260433376|ref|ZP_05787347.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417204|gb|EEX10463.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Silicibacter
lacuscaerulensis ITI-1157]
Length = 181
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGR-SAPMNEVQ 96
G I + VAP+ V+ I L G Y+ F RV GF+AQ DV G+ + M
Sbjct: 30 GTITIDLFEDVAPKHVEQITALAAEGKYDGVAFHRVIDGFMAQTGDVEHGKLGSDMRRAG 89
Query: 97 RVEAEK-TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+++ + EFSDV + RGI+ M R DPNSA S F I+ AP L+GQY V GKVT
Sbjct: 90 TGGSDRPDLPAEFSDVPYERGIVGMARARDPNSANSQFFIMFDAAPSLNGQYTVVGKVTD 149
Query: 156 G 156
G
Sbjct: 150 G 150
>gi|390168147|ref|ZP_10220113.1| peptidyl-prolyl cis-trans isomerase B [Sphingobium indicum B90A]
gi|389589213|gb|EIM67242.1| peptidyl-prolyl cis-trans isomerase B [Sphingobium indicum B90A]
Length = 150
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VGGRSAPMN 93
GD+ P +AP V+ I +L + G Y+ F RV GF+AQ D +GG P
Sbjct: 14 GDVVIKLRPDLAPGHVERIIQLAKDGFYDGVVFHRVIPGFMAQGGDPTGTGMGGSKLP-- 71
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ EFS HVRG+ SM R +PNSA S F I DA LDGQY V+G+V
Sbjct: 72 ---------DLKAEFSREPHVRGVCSMARAMNPNSANSQFFICFDDATFLDGQYTVWGEV 122
Query: 154 TKGDETLRKL-EGLPTRKEGIFVMPT 178
T G E + L +G P + G V T
Sbjct: 123 TSGMEHVDALPKGEPPKTPGKIVKAT 148
>gi|209964688|ref|YP_002297603.1| peptidyl-prolyl cis-trans isomerase family protein [Rhodospirillum
centenum SW]
gi|209958154|gb|ACI98790.1| peptidyl-prolyl cis-trans isomerase family protein, putative
[Rhodospirillum centenum SW]
Length = 158
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV 105
P +AP+ V I +L R G Y+ F RV GF+AQ D + K +
Sbjct: 22 PDLAPKHVAQIKELARKGFYDGTPFHRVIDGFMAQGGDPT--------GTGTGGSGKNIP 73
Query: 106 GEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEG 165
EFS KHVRG SM R ++PNSA S F I AP LDGQY ++G+VT+G E + ++
Sbjct: 74 AEFSREKHVRGTASMARAANPNSADSQFFICFAPAPFLDGQYTIWGQVTEGMEHVDAIKK 133
Query: 166 LPTRKEG 172
+ + G
Sbjct: 134 GDSNRNG 140
>gi|158423948|ref|YP_001525240.1| peptidyl prolyl cis-trans isomerase [Azorhizobium caulinodans ORS
571]
gi|158330837|dbj|BAF88322.1| peptidyl prolyl cis-trans isomerase [Azorhizobium caulinodans ORS
571]
Length = 152
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T GD+ F P +AP V I +LV G YN F RV +GF+AQ D G
Sbjct: 6 LVLETTKGDVTIKFRPDLAPNHVARIKELVNEGFYNNVPFHRVIEGFMAQTGDGQYGNGM 65
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ K + EF+ HVRG SM R +P+S S F I DA LD QY V+
Sbjct: 66 G-------GSGKKLKAEFNAEPHVRGTCSMARAQNPDSGDSQFFICFTDARFLDRQYTVW 118
Query: 151 GKVTKGDETLRKLE 164
G+V G E + K++
Sbjct: 119 GQVVSGMENVDKIK 132
>gi|377821180|ref|YP_004977551.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
sp. YI23]
gi|357936015|gb|AET89574.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
sp. YI23]
Length = 193
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 2 LNVIRIFLTLITLIGTASS--QEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+ V+ + L+ LI +A + Q + Q V+ +T GDI+ YP AP+TV +
Sbjct: 1 MKVLMLALSSAALIASAPAFAQPNAQAAHPVVLIKTTQGDIKVELYPEKAPKTVANFLDY 60
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILS 119
V+ G Y+ F RV GF+ Q GG S E + + + +K+ G ++
Sbjct: 61 VKSGQYSGTIFHRVIPGFMIQ----GGGYSTSFAE--KPTRAPIPLESRNGLKNATGTIA 114
Query: 120 MGRYSDPNSAASSFSILLGDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEG 172
M R SDPNSA + F I D P DG YAVFGKV G + ++K+EG PT G
Sbjct: 115 MARTSDPNSATAQFFINTVDNAGLDYPSPDGNGYAVFGKVVGGMDVVKKIEGSPTTSRG 173
>gi|225387873|ref|ZP_03757637.1| hypothetical protein CLOSTASPAR_01643 [Clostridium asparagiforme
DSM 15981]
gi|225046000|gb|EEG56246.1| hypothetical protein CLOSTASPAR_01643 [Clostridium asparagiforme
DSM 15981]
Length = 242
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG I Y AP +V + KL G Y+ F R+ GF+ Q D +G +
Sbjct: 89 DYGTISVELYADEAPISVTNFLKLAGEGFYDGLTFHRIITGFMIQGGDPLG--TGMGGSD 146
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
Q ++ E G + ++H RG +SM R P+SA+S F I+ D+PHLDGQYA FG VT
Sbjct: 147 QMIKGEFAANGVENPLQHTRGAISMARSQYPDSASSQFFIVHQDSPHLDGQYAAFGYVTD 206
Query: 156 GDETLRKL 163
G + + KL
Sbjct: 207 GMDVVDKL 214
>gi|298291668|ref|YP_003693607.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Starkeya
novella DSM 506]
gi|296928179|gb|ADH88988.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Starkeya
novella DSM 506]
Length = 152
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 16/152 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
++ +T G ++ P +AP V I +L + G Y+ F RV +GF+AQ D G GR
Sbjct: 9 LLLETTQGPVKIRLRPDLAPGHVARISELAKEGFYDGVPFHRVIEGFMAQTGDPTGTGRG 68
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
Q+++AE F+ +HVRG +SM R P+S S F I DA LDGQY V
Sbjct: 69 G---SGQKLKAE------FNKGRHVRGTVSMARAQHPDSGDSQFFICFADASFLDGQYTV 119
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERI 181
+G+V +G E + K+ K G VM ++I
Sbjct: 120 WGEVIEGMENVDKI------KRGEPVMNPDKI 145
>gi|302505765|ref|XP_003014589.1| hypothetical protein ARB_07151 [Arthroderma benhamiae CBS 112371]
gi|291178410|gb|EFE34200.1| hypothetical protein ARB_07151 [Arthroderma benhamiae CBS 112371]
Length = 587
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 24 PQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVAD 83
P + T GDI +PSVAP+TV++ R G YN F RV + F+ Q D
Sbjct: 431 PAETGTSAILHTTLGDIHLRLFPSVAPKTVENFVTHSRNGYYNNTIFHRVIRKFMIQAGD 490
Query: 84 VVG----GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLG 138
+G G S E + EFS +KH + LSM + PN+ AS F I
Sbjct: 491 PLGDGTGGESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNASQFFITTE 540
Query: 139 DAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
AP LDG + +FG+ KG + + K+E + T KE P E + I S
Sbjct: 541 KAPWLDGNHTIFGRAVKGMDVIHKIENVKTHKE----KPEEDVKIVS 583
>gi|373493799|ref|ZP_09584409.1| hypothetical protein HMPREF0380_00047 [Eubacterium infirmum F0142]
gi|371969504|gb|EHO86949.1| hypothetical protein HMPREF0380_00047 [Eubacterium infirmum F0142]
Length = 158
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAPMNEVQRVEA 100
Y +AP TV++ KL G Y+ F RV GF+ Q GG + ++
Sbjct: 18 LYEDIAPITVENFEKLANSGFYDGLTFHRVIPGFMIQ-----GGCPNGNGTGGPGYTIKG 72
Query: 101 EKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
E ++ G +D+KH G+LSM R P+SA S F +++ DAPHLDGQYA FGK+T+G E
Sbjct: 73 EFSMNGVKNDLKHTTGVLSMARTMVPDSAGSQFFVMVADAPHLDGQYAGFGKITEGIE 130
>gi|451342731|ref|ZP_21911814.1| hypothetical protein HMPREF9943_00039 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449338462|gb|EMD17607.1| hypothetical protein HMPREF9943_00039 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 202
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG IE AP TV + L+ Y+ F R+ KGF+ Q D +G + +
Sbjct: 50 DYGTIEATLDGKAAPITVKNFVSLINEKFYDGLTFHRIIKGFMIQGGDPMGNGTGGSDN- 108
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++ E G + + H RG+LSM R D NSA+S F I+ D LDGQYA FGKVTK
Sbjct: 109 -NIKGEFKANGYNNPISHQRGVLSMARSQDYNSASSQFFIMQKDNTSLDGQYAAFGKVTK 167
Query: 156 GDETLRKL 163
G E + K+
Sbjct: 168 GIEIVDKI 175
>gi|209518047|ref|ZP_03266878.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
sp. H160]
gi|209501551|gb|EEA01576.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
sp. H160]
Length = 193
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+F+T+ GDI YP AP+TV + V+ G Y+ F RV G
Sbjct: 19 AFAQSGSQAAHPSVLFKTSEGDIRVELYPEKAPKTVANFLDYVKAGQYSGTIFHRVIPGL 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q G + V++ + S +K+ G ++M R SDPNSA + F I
Sbjct: 79 MIQ------GGGYTQSFVEKPTRAPIPLESRSGLKNTAGTIAMARTSDPNSATAQFFINT 132
Query: 138 GDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
D P+ DG YAVFGKVT G + ++++E PT G +P + I I S+
Sbjct: 133 VDNANLDYPNPDGNGYAVFGKVTSGMDVVKRIEATPTTTRGPMSDVPQKAIVIQSA 188
>gi|209549346|ref|YP_002281263.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424890400|ref|ZP_18313999.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|424913972|ref|ZP_18337336.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|209535102|gb|ACI55037.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392850148|gb|EJB02669.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|393172618|gb|EJC72663.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 169
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP+ V I +L R Y+ F RV + F+AQ DV G+
Sbjct: 11 IILETTKGKVVIQLLPQVAPEHVARIKELAREKAYDGVVFHRVIQDFMAQTGDVEFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P ++ + EFS H RG SM R +PNSA S F I DAP L+
Sbjct: 71 SETFNPGRAGMGGSSKPDLKAEFSATTHTRGTCSMARSQNPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNVDKIK 149
>gi|326477437|gb|EGE01447.1| peptidyl-prolyl cis-trans isomerase cyp15 [Trichophyton equinum CBS
127.97]
Length = 630
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---- 86
+ T GDI +PSVAP+TV++ R G YN F RV + F+ Q D +G
Sbjct: 481 AILHTTLGDIHLRLFPSVAPKTVENFVTHSRNGYYNNTIFHRVIRKFMIQAGDPLGDGTG 540
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G S E + EFS +KH + LSM + PN+ AS F I AP LDG
Sbjct: 541 GESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNASQFFITTEKAPWLDG 590
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
+ +FG+ KG + + K+E + T KE P E + I S
Sbjct: 591 NHTIFGRAVKGMDVIHKIENVKTHKE----KPEEDVKIVS 626
>gi|326476551|gb|EGE00561.1| peptidyl-prolyl cis-trans isomerase [Trichophyton tonsurans CBS
112818]
Length = 630
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---- 86
+ T GDI +PSVAP+TV++ R G YN F RV + F+ Q D +G
Sbjct: 481 AILHTTLGDIHLRLFPSVAPKTVENFVTHSRNGYYNNTIFHRVIRKFMIQAGDPLGDGTG 540
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G S E + EFS +KH + LSM + PN+ AS F I AP LDG
Sbjct: 541 GESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNASQFFITTEKAPWLDG 590
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
+ +FG+ KG + + K+E + T KE P E + I S
Sbjct: 591 NHTIFGRAVKGMDVIHKIENVKTHKE----KPEEDVKIVS 626
>gi|13470905|ref|NP_102474.1| peptidyl prolyl cis-trans isomerase [Mesorhizobium loti MAFF303099]
gi|14021648|dbj|BAB48260.1| peptidyl prolyl cis-trans isomerase [Mesorhizobium loti MAFF303099]
Length = 170
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
++ +T G + +P +AP V I +L R G Y+ F RV GF+AQ DV G S
Sbjct: 11 LIMETTKGKVVIELFPDLAPGHVARIKELAREGAYDGVVFHRVIDGFMAQTGDVKFGNSS 70
Query: 90 ----APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
AP + + EFS+ H RG SM R +PNSA S F I DA L+
Sbjct: 71 KPTFAPSRAGMGGSDKPDLKAEFSNANHGRGTCSMARSQNPNSANSQFFICFDDAAFLNR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V+G+V +G + + K++
Sbjct: 131 QYTVWGQVIEGMDNVDKIK 149
>gi|374579245|ref|ZP_09652339.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfosporosinus youngiae DSM 17734]
gi|374415327|gb|EHQ87762.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Desulfosporosinus youngiae DSM 17734]
Length = 224
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99
I+ YP++AP TV L + G YN F RV GF+ Q D + ++
Sbjct: 65 IKVELYPNIAPNTVKSFVALAKKGFYNGLIFHRVIPGFMIQGGDPN--GNGTGGPGYSIK 122
Query: 100 AEKTVVGEFSDVKHVRGILSMGRYS-DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
E T G +++KH RG++SMGR D NSA S F I++ + P+LD YA FGKV G E
Sbjct: 123 GEFTNNGFVNNLKHERGVISMGRTPYDLNSAGSQFFIMVSNVPNLDKDYAAFGKVISGME 182
Query: 159 TLRKLEGLPTRKE 171
T+ K+ P E
Sbjct: 183 TVDKIVNSPRDDE 195
>gi|210618037|ref|ZP_03291872.1| hypothetical protein CLONEX_04105 [Clostridium nexile DSM 1787]
gi|210149030|gb|EEA80039.1| hypothetical protein CLONEX_04105 [Clostridium nexile DSM 1787]
Length = 172
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ GD I+ YP +AP TV++ LV+ G YN F RV + F+ Q G G
Sbjct: 6 VTFEMENGDVIKAELYPEIAPNTVNNFITLVQDGFYNGLIFHRVIRDFMIQGGCPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E + G +++KH G+LSM R P+SA S F I+ ++PHLDG YA
Sbjct: 66 GGPG---YSIKGEFSQNGFTNNLKHEPGVLSMARAMHPDSAGSQFFIMHKNSPHLDGSYA 122
Query: 149 VFGKVTKGDETLRKL 163
FGKV +G + + K+
Sbjct: 123 AFGKVIEGMDIVNKI 137
>gi|163760250|ref|ZP_02167333.1| peptidyl prolyl cis-trans isomerase [Hoeflea phototrophica DFL-43]
gi|162282649|gb|EDQ32937.1| peptidyl prolyl cis-trans isomerase [Hoeflea phototrophica DFL-43]
Length = 171
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G I P +AP V I +L R G Y+ F RV +GF+AQ DV G+S
Sbjct: 11 LIVETTQGTITIEMLPDLAPGHVARIKELAREGAYDGVVFHRVIEGFMAQTGDVKFGKSD 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS++ H RG SM R DPNSA S F I DA L+
Sbjct: 71 GASFDPRRAGMGGSDKPDLKAEFSNMNHGRGTCSMARAQDPNSANSQFFICFDDAGFLNR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V+G+V +G + + K++
Sbjct: 131 QYTVWGQVMEGMDNVDKIK 149
>gi|225570928|ref|ZP_03779951.1| hypothetical protein CLOHYLEM_07032 [Clostridium hylemonae DSM
15053]
gi|225160390|gb|EEG73009.1| hypothetical protein CLOHYLEM_07032 [Clostridium hylemonae DSM
15053]
Length = 179
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG-- 87
V F+ GD+ + YP +AP TV++ LV G Y+ F RV GF+ Q GG
Sbjct: 13 VTFEMENGDVMKAELYPDIAPNTVNNFISLVGKGYYDGLIFHRVISGFMIQ-----GGCP 67
Query: 88 -RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ ++ E + G +D+KH G+LSM R P+SA S F I+ ++PHLDG
Sbjct: 68 DGTGTGGPGYNIKGEFSQNGFSNDLKHGEGVLSMARAMHPDSAGSQFFIMHKNSPHLDGS 127
Query: 147 YAVFGKVTKGDETLRKLEGLPT 168
YA FGK+ +G + + K+ T
Sbjct: 128 YAAFGKIIEGMDVVNKIAAADT 149
>gi|403530652|ref|YP_006665181.1| peptidyl-prolyl cis-trans isomerase b [Bartonella quintana RM-11]
gi|403232723|gb|AFR26466.1| peptidyl-prolyl cis-trans isomerase b [Bartonella quintana RM-11]
Length = 188
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V G++ F P +AP+ V I +L + G YN F RV GF+AQ DV G+
Sbjct: 26 LVLSLKNGEVVIRFRPDLAPKHVAQIKRLTKEGAYNNVVFHRVIPGFMAQTGDVQFGKKG 85
Query: 91 PMN-EVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
N +++RV + + EFS+ RG + M R +P+SA S F I DA L+G
Sbjct: 86 SANFDLKRVGTGGSNYPNIPAEFSEQPFKRGTVGMARSQNPDSANSQFFICFNDAVFLNG 145
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEG 172
QY V G+V KG + + K++ T G
Sbjct: 146 QYTVVGEVVKGMDVVDKIKKGTTSNNG 172
>gi|390450966|ref|ZP_10236550.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor aquibiodomus RA22]
gi|389661728|gb|EIM73327.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor aquibiodomus RA22]
Length = 196
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 10 TLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNH 69
L+ +G AS+ E P+ ++ G++ G P +AP+ V+ + LV G Y+
Sbjct: 15 ALVASLGMASAAE-PE---NTLILTLRNGEVTIGLRPDLAPRHVEQVKALVEEGAYDNVA 70
Query: 70 FFRVDKGFVAQVADVVGGRSAPMNEVQRVE---AEK-TVVGEFSDVKHVRGILSMGRYSD 125
F RV GF+AQ DV G + + V +EK + EFS+ RG + M R +
Sbjct: 71 FHRVIDGFMAQTGDVQYGDVEDGFDARLVGTGGSEKPDLPAEFSEAAFARGTVGMARSQN 130
Query: 126 PNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177
PNSA S F I+ A HL+GQY V G+V G E + ++ + G+ P
Sbjct: 131 PNSANSQFFIMFAPAEHLNGQYTVIGEVESGMELVDAIKKGDAAQNGMVQSP 182
>gi|114777558|ref|ZP_01452539.1| Peptidyl-prolyl cis-trans isomerase [Mariprofundus ferrooxydans
PV-1]
gi|114552029|gb|EAU54546.1| Peptidyl-prolyl cis-trans isomerase [Mariprofundus ferrooxydans
PV-1]
Length = 202
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V +T G YP AP TV + L G Y+ F RV GF+AQ D G G
Sbjct: 64 HVRIETKNGSFLIELYPDDAPNTVANFKVLAAKGFYDGLTFHRVITGFMAQGGDPKGNGT 123
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P +V+ EF+D KH RG ++M R SDP+SA S F I G PHLD Y
Sbjct: 124 GGPGYKVK---------AEFNDRKHQRGTVAMARSSDPDSAGSQFYICYGPQPHLDHHYT 174
Query: 149 VFGKVTKGDETLRKL 163
+FG+V +G + + ++
Sbjct: 175 IFGQVVEGMDVVDQI 189
>gi|326792484|ref|YP_004310305.1| peptidyl-prolyl isomerase [Clostridium lentocellum DSM 5427]
gi|326543248|gb|ADZ85107.1| Peptidylprolyl isomerase [Clostridium lentocellum DSM 5427]
Length = 324
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 37 YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQ 96
YG + YP +AP TV++ L G Y+ F RV + F+ Q D
Sbjct: 161 YGTVTLELYPDLAPNTVNNFITLANSGFYDGLIFHRVIEDFMIQGGDPN--------GNG 212
Query: 97 RVEAEKTVVGEFSD-------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
++ GEFS + H +G++SM R +P+SA S F I+ D +LDGQYA
Sbjct: 213 TGGPGYSIAGEFSSNGFTTNTLSHTKGVISMARAMNPDSAGSQFFIMSSDGTYLDGQYAA 272
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
FGKV G + + K++ + T + P + I I S
Sbjct: 273 FGKVISGLDIIEKIQLVDTNNQD---KPLKDIVIES 305
>gi|359791961|ref|ZP_09294793.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359252024|gb|EHK55324.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 171
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T G + P +AP V I +L R G Y+ F RV GF+AQ DV G S
Sbjct: 11 LVMETTKGKVVIELLPDLAPGHVARIKELAREGAYDGVVFHRVIDGFMAQTGDVKFGNST 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS++ H RG SM R +PNSA S F I DA L+
Sbjct: 71 KTSFNPSRAGMGGSDKPDLKAEFSNMNHSRGTCSMARSQNPNSANSQFFICFDDAAFLNR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V+G+V +G E + K++
Sbjct: 131 QYTVWGQVIEGMENVDKIK 149
>gi|395790928|ref|ZP_10470387.1| hypothetical protein MEC_00378 [Bartonella alsatica IBS 382]
gi|395409224|gb|EJF75823.1| hypothetical protein MEC_00378 [Bartonella alsatica IBS 382]
Length = 195
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
S +V GD+ F +AP+ V I +L + G YN F RV GF+AQ DV G
Sbjct: 25 SNVLVLSLKNGDVVIRFRSDLAPKHVAQIKRLTKEGAYNNVVFHRVIPGFMAQTGDVKFG 84
Query: 88 RSAPMN-EVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
+ ++ +++RV + + EFS+ RG + M R DP+SA S F I DA
Sbjct: 85 KKGSVDFDLKRVGTGGSNYPNIPAEFSEQPFKRGTVGMARSQDPHSANSQFFICFNDAAF 144
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177
L+GQY V G+V KG + + +++ T G + P
Sbjct: 145 LNGQYTVIGEVIKGMDVVDQIKKGTTSNNGSVIDP 179
>gi|357037379|ref|ZP_09099179.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Desulfotomaculum gibsoniae DSM 7213]
gi|355361544|gb|EHG09299.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Desulfotomaculum gibsoniae DSM 7213]
Length = 143
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
+ + +V+ T+ G I YP P TV++ KL G YN F RV+ +V Q D
Sbjct: 1 MAAQQVLISTDKGSITMELYPEKMPVTVENFLKLTNDGFYNGLTFHRVEH-WVVQGGDPR 59
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G + ++E D+K+VRG ++M R + P+SA S F IL DA LDG
Sbjct: 60 GNGTGGPGWTIKLETH-------PDLKNVRGAVAMARSAHPDSAGSQFYILKTDAGWLDG 112
Query: 146 QYAVFGKVTKGDETLRKLE 164
QYAVFG VT+G + + +L+
Sbjct: 113 QYAVFGIVTEGMDVVDELD 131
>gi|294638073|ref|ZP_06716332.1| peptidylprolyl isomerase A [Edwardsiella tarda ATCC 23685]
gi|451967493|ref|ZP_21920734.1| peptidyl-prolyl cis-trans isomerase A [Edwardsiella tarda NBRC
105688]
gi|291088781|gb|EFE21342.1| peptidylprolyl isomerase A [Edwardsiella tarda ATCC 23685]
gi|451313729|dbj|GAC66096.1| peptidyl-prolyl cis-trans isomerase A [Edwardsiella tarda NBRC
105688]
Length = 188
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
RI +TL+TL A + RV+ T+ G+IE Y AP TVD+ V G Y
Sbjct: 4 RIVITLVTLFSLAVMAPAALAANTRVMLTTSAGNIELELYNQKAPVTVDNFLGYVNSGFY 63
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYS 124
N F RV GF+ Q GG +A M Q+ + + E + ++++RG ++M R +
Sbjct: 64 NGTLFHRVIPGFMIQ----GGGFTAAM---QQKPTQAPIKNEADNGLRNLRGTIAMARTA 116
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
+ +SA S F I + D LD GQ YAVFGKV KG + + K+ + T G + +P
Sbjct: 117 EKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVIKGMDIVDKISQVRTENVGPYQNVPV 176
Query: 179 ERITIHSS 186
+ I I S+
Sbjct: 177 KPIVITSA 184
>gi|291546948|emb|CBL20056.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Ruminococcus sp. SR1/5]
Length = 172
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP VAP TV++ LV+ G Y+ F RV GF+ Q G G P ++
Sbjct: 20 LYPEVAPNTVNNFISLVKKGFYDGLIFHRVINGFMIQGGCPDGTGMGGPGYSIK------ 73
Query: 103 TVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
GEFS D+KH G+LSM R +PNSA S F I+ APHLDG YA FG++ +G
Sbjct: 74 ---GEFSQNHFKNDLKHTPGVLSMARAMNPNSAGSQFFIMHKAAPHLDGSYAAFGQIIEG 130
Query: 157 DETLRKL 163
+ + +
Sbjct: 131 MDVVNAI 137
>gi|110633756|ref|YP_673964.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Chelativorans
sp. BNC1]
gi|110284740|gb|ABG62799.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Chelativorans sp. BNC1]
Length = 193
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
+ + G+A+ +P+ ++ + GD+ G P +AP+ V+ I LVR G Y+
Sbjct: 12 VAAVLAFGSAALAAEPE---NTMIIKLKDGDVVIGLRPDLAPKHVEQIKTLVRQGAYDNV 68
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV GF+AQ DV G +R + + EF++ RG + M R
Sbjct: 69 AFHRVIDGFMAQTGDVQFGDLEDGFSAERAGTGGSDLPDLPAEFTNTAFDRGTVGMARSQ 128
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
DPNSA S F I+ A HL+G Y V G+V G E + ++ G+ P +++
Sbjct: 129 DPNSANSQFFIMFAPASHLNGAYTVVGQVETGMELVDNIKKGDPAANGLVQDPDRMLSV 187
>gi|295110702|emb|CBL24655.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Ruminococcus obeum A2-162]
Length = 174
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ LV+ G Y+ F RV GF+ Q G G P ++ E
Sbjct: 22 LYPEIAPNTVNNFISLVKKGFYDGLIFHRVINGFMIQGGCPDGTGMGGPG---YSIKGEF 78
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
T G +D+ H G+LSM R PNS S F I+ APHL+G YA FGKV +G + + K
Sbjct: 79 TQNGVANDLAHTPGVLSMARAMHPNSGGSQFFIMHKAAPHLNGSYAAFGKVIEGMDVVNK 138
Query: 163 L 163
+
Sbjct: 139 I 139
>gi|317057612|ref|YP_004106079.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ruminococcus
albus 7]
gi|315449881|gb|ADU23445.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Ruminococcus
albus 7]
Length = 412
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 76/152 (50%), Gaps = 22/152 (14%)
Query: 23 DPQL-GSARVVFQTNYGDIEFG-------FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVD 74
DP G R F N+ + EF AP T ++ KLV+ G Y+ F RV
Sbjct: 220 DPDTDGHKRAKFTVNFTEREFKEGEFTITLRADKAPITCENFKKLVKEGFYDGLTFHRVV 279
Query: 75 KGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNS 128
F+AQ D G +E T+ GEFS D+KHVRG +SM R SDP+S
Sbjct: 280 DDFMAQGGDPEGTGMGGSSE--------TIKGEFSENGVENDLKHVRGTVSMARSSDPDS 331
Query: 129 AASSFSILLGDAPHLDGQYAVFGKVTKGDETL 160
A+S F I D LDGQYA FG+V++G E +
Sbjct: 332 ASSQFFICFTDCAFLDGQYAAFGEVSEGMEVV 363
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 49 APQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEF 108
AP + ++ KLV G Y+ F RV GF+AQ D G + E ++ E + G
Sbjct: 79 APISCENFEKLVSSGFYDGVTFHRVVAGFMAQGGDPEGTGAGGSGE--NIKGEFSANGVE 136
Query: 109 SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
+D+KH RG +SM R D +SA+S F I D LDG YA FG+V++G E + K
Sbjct: 137 NDLKHQRGTVSMARSQDNDSASSQFFICYDDCDFLDGNYAAFGEVSQGMEVVDKF 191
>gi|209964687|ref|YP_002297602.1| peptidyl-prolyl cis-trans isomerase family protein [Rhodospirillum
centenum SW]
gi|209958153|gb|ACI98789.1| peptidyl-prolyl cis-trans isomerase family protein, putative
[Rhodospirillum centenum SW]
Length = 188
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 90/188 (47%), Gaps = 32/188 (17%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFG-----FYPSVAPQTVDH 55
M +I + L L L+ +A P L AR + T Y D+ G P +AP+ V
Sbjct: 1 MPRLIAMVLLLAGLVLSA-----PAL--ARDLENTLYLDLPAGRVVIEMRPDLAPRHVAR 53
Query: 56 IFKLVRLGCYNTNHFFRVDKGFVAQVADVVG------GRSAPMNEVQRVEAEKTVVGEFS 109
I +L R G Y+ F RV GF+AQ D G GR+ P+ E S
Sbjct: 54 IKELARQGFYDGIPFHRVIDGFMAQTGDPTGTGAGGSGRTLPL--------------ESS 99
Query: 110 DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTR 169
+ KH RGI+SM R S PNSA S F I+ G P LD Y V+G+V +G E + L+ T
Sbjct: 100 EEKHERGIVSMARGSSPNSADSQFFIMYGRRPGLDRLYTVWGRVVEGMEHVDALKKGDTA 159
Query: 170 KEGIFVMP 177
+G+ P
Sbjct: 160 ADGMVEAP 167
>gi|331002646|ref|ZP_08326161.1| hypothetical protein HMPREF0491_01023 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330407059|gb|EGG86563.1| hypothetical protein HMPREF0491_01023 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 172
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV + L+ Y+ F RV GF+ Q G G P ++
Sbjct: 16 IKIELYPEVAPNTVRNFISLINEKFYDGLTFHRVISGFMIQGGCPQGNGMGGP---DYQI 72
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E G +D+ H RG++SM R PNSA S F I+ DAPHLDG YA FG V +G +
Sbjct: 73 KGEFNQNGFQNDLAHSRGVISMARAMSPNSAGSQFFIMHQDAPHLDGAYAAFGTVVEGMD 132
Query: 159 TLRKLEGLPT 168
+ K+ + T
Sbjct: 133 VVDKIAAVDT 142
>gi|221214719|ref|ZP_03587688.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
multivorans CGD1]
gi|221165258|gb|EED97735.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
multivorans CGD1]
Length = 191
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 25 QLGSARVVFQ--TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
Q +A V Q T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q
Sbjct: 22 QTATAHPVVQLKTSQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ-- 79
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-- 140
GG A +E + + + +K++ G ++M R SDPNSA + F I D
Sbjct: 80 --GGGYKANFDE--KPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNSG 135
Query: 141 ---PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
P+ DG YAVFGKV G + ++K+E PT G +P + + I S+
Sbjct: 136 LDYPNPDGNGYAVFGKVVSGLDVVKKIEAAPTTSRGPMQDVPAQPVVIESA 186
>gi|327295939|ref|XP_003232664.1| peptidyl-prolyl cis-trans isomerase [Trichophyton rubrum CBS
118892]
gi|326464975|gb|EGD90428.1| peptidyl-prolyl cis-trans isomerase [Trichophyton rubrum CBS
118892]
Length = 630
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---- 86
+ T GD+ +PSVAP+TV++ R G YN F RV + F+ Q D +G
Sbjct: 481 AILHTTLGDVHLRLFPSVAPKTVENFVTHSRNGYYNNTIFHRVIRKFMIQAGDPLGDGTG 540
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G S E + EFS +KH + LSM + PN+ AS F I AP LDG
Sbjct: 541 GESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNASQFFITTEKAPWLDG 590
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
+ +FG+ KG + + K+E + T KE P E + I S
Sbjct: 591 HHTIFGRAVKGMDVIHKIENVKTHKE----KPEEDVKIVS 626
>gi|13470906|ref|NP_102475.1| peptidyl prolyl cis-trans isomerase [Mesorhizobium loti MAFF303099]
gi|14021649|dbj|BAB48261.1| peptidyl prolyl cis-trans isomerase [Mesorhizobium loti MAFF303099]
Length = 164
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD+ P +AP+ V I KLVR Y+ F RV GF+AQ DV G Q
Sbjct: 8 GDVTIALRPDLAPKHVAQIKKLVRDHAYDNVAFHRVIDGFMAQTGDVKFGNMKKGFNSQA 67
Query: 98 VEAEKT----VVGEFSDVKHV-RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
V + + EFS +H RG++ M R DPNSA S F I+ AP LDGQY + G
Sbjct: 68 VGTGGSDLPDLPAEFSQTEHYKRGVVGMARSQDPNSANSQFFIMFAPAPPLDGQYTIVGN 127
Query: 153 VTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
V G E + ++ G P I +
Sbjct: 128 VVSGMELVDHIKKGDEADNGTVSDPDRMIKV 158
>gi|294010639|ref|YP_003544099.1| peptidyl-prolyl cis-trans isomerase B [Sphingobium japonicum UT26S]
gi|292673969|dbj|BAI95487.1| peptidyl-prolyl cis-trans isomerase B [Sphingobium japonicum UT26S]
Length = 150
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VGGRSAPMN 93
GD+ P +AP V+ I +L + G Y+ F RV GF+AQ D +GG P
Sbjct: 14 GDVVIKLRPDLAPGHVERITQLAKDGFYDGVVFHRVIPGFMAQGGDPTGTGMGGSKLP-- 71
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ EFS HVRG+ SM R +PNSA S F I DA LDGQY V+G+V
Sbjct: 72 ---------DLKAEFSREPHVRGVCSMARAMNPNSANSQFFICFDDATFLDGQYTVWGEV 122
Query: 154 TKGDETLRKL-EGLPTRKEGIFVMPT 178
T G E + L +G P + G V T
Sbjct: 123 TSGMEHVDALPKGEPPKTPGKIVKAT 148
>gi|167767874|ref|ZP_02439927.1| hypothetical protein CLOSS21_02411 [Clostridium sp. SS2/1]
gi|317497180|ref|ZP_07955506.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
[Lachnospiraceae bacterium 5_1_63FAA]
gi|429762436|ref|ZP_19294826.1| putative peptidyl-prolyl cis-trans isomerase B [Anaerostipes hadrus
DSM 3319]
gi|167710613|gb|EDS21192.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
sp. SS2/1]
gi|291558800|emb|CBL37600.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[butyrate-producing bacterium SSC/2]
gi|316895590|gb|EFV17746.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
[Lachnospiraceae bacterium 5_1_63FAA]
gi|429181681|gb|EKY22836.1| putative peptidyl-prolyl cis-trans isomerase B [Anaerostipes hadrus
DSM 3319]
Length = 161
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 8/128 (6%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAPMNEVQRVEA 100
YP +AP TV++ LV+ G Y+ F R+ GF+ Q GG + ++
Sbjct: 20 LYPEIAPITVENFVNLVKDGFYDGLTFHRIINGFMIQ-----GGCPLGTGTGGPGHTIKG 74
Query: 101 EKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETL 160
E + G +++KH G+LSM R P+SA S F I+ APHLDGQYA FGK+ +G + +
Sbjct: 75 EFSQNGVINNLKHTPGVLSMARSMMPDSAGSQFFIMHKAAPHLDGQYAAFGKIIEGMDVV 134
Query: 161 RKLEGLPT 168
K+ + T
Sbjct: 135 NKIAEVAT 142
>gi|405376132|ref|ZP_11030090.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF142]
gi|397327375|gb|EJJ31682.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF142]
Length = 169
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P VAP+ V I +L R Y+ F RV F+AQ DV G+
Sbjct: 11 IILETTKGKVVIQLLPQVAPEHVKRIKELAREKAYDGVVFHRVIADFMAQTGDVQFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS H+RG SM R PNSA S F I DAP L+
Sbjct: 71 GENFNPGRAGMGGSEKDDLKAEFSATPHIRGTCSMARSQSPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + K++
Sbjct: 131 QYSVWGQVIEGMDNIDKIK 149
>gi|381203529|ref|ZP_09910635.1| peptidyl-prolyl cis-trans isomerase B [Sphingobium yanoikuyae
XLDN2-5]
gi|398384671|ref|ZP_10542699.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Sphingobium sp. AP49]
gi|427408892|ref|ZP_18899094.1| hypothetical protein HMPREF9718_01568 [Sphingobium yanoikuyae ATCC
51230]
gi|397721951|gb|EJK82496.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Sphingobium sp. AP49]
gi|425713202|gb|EKU76216.1| hypothetical protein HMPREF9718_01568 [Sphingobium yanoikuyae ATCC
51230]
Length = 150
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VGGRSAPMN 93
GD+ P +AP V+ I L + G Y+ F RV GF+AQ D +GG P
Sbjct: 14 GDVVIKLRPDLAPGHVERITTLAKDGFYDGVVFHRVIPGFMAQGGDPTGTGMGGSKLP-- 71
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ EFS HVRG+ SM R +PNSA S F I DA LDGQY V+G+V
Sbjct: 72 ---------DIKAEFSREPHVRGVCSMARAMNPNSANSQFFICFDDATFLDGQYTVWGEV 122
Query: 154 TKGDETLRKL-EGLPTRKEGIFVMPT 178
T G E + L +G P + G V T
Sbjct: 123 TSGMEHVDALPKGEPPKTPGKIVKAT 148
>gi|393198888|ref|YP_006460730.1| peptidyl-prolyl cis-trans isomerase [Solibacillus silvestris
StLB046]
gi|327438219|dbj|BAK14584.1| peptidyl-prolyl cis-trans isomerase [Solibacillus silvestris
StLB046]
Length = 213
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTV 104
P AP TV + LV G Y+ F RV GF+ Q D G G P ++ E T
Sbjct: 62 PKTAPNTVANFISLVEDGFYDGLIFHRVIPGFMIQGGDPDGTGMGGPD---YAIKGEFTS 118
Query: 105 VGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
G + + H RG++SM R DP+SA S F I+ A HLDG YA FGKVT+G ET+ ++
Sbjct: 119 NGFENTLTHERGVISMARSQDPDSAGSQFFIMTEQATHLDGDYAAFGKVTEGMETVDEI 177
>gi|222148797|ref|YP_002549754.1| peptidyl prolyl cis-trans isomerase [Agrobacterium vitis S4]
gi|221735783|gb|ACM36746.1| peptidyl prolyl cis-trans isomerase [Agrobacterium vitis S4]
Length = 192
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
L L +L A +Q G + Q G + P VAP+ V I LV G Y+
Sbjct: 11 LLALSSLATNAMAQAAS--GDNTMTIQLKDGPVVVQLMPEVAPKHVAQIKTLVSQGQYDN 68
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRY 123
F RV +GF+AQ DV G + R + + EFS VRG + M R
Sbjct: 69 VAFHRVIEGFMAQTGDVQYGNMKSGFDKSRAGTGASKLPNIPAEFSKTPFVRGTVGMARS 128
Query: 124 SDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
DPNSA S F I+ GD L+GQY GKV G E + K++
Sbjct: 129 QDPNSANSQFFIMFGDGSFLNGQYTAVGKVVSGMEFVDKIK 169
>gi|254503535|ref|ZP_05115686.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Labrenzia alexandrii DFL-11]
gi|222439606|gb|EEE46285.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Labrenzia alexandrii DFL-11]
Length = 178
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQ------LGSARVVFQTNYGDIEFGFYPSVAPQTVD 54
+ + + +LI + A +Q+DP+ L RVV + P +AP V
Sbjct: 4 IFTALAVLASLIFMPAMAVAQQDPENTLYLDLKDGRVVIE---------LRPDLAPNHVA 54
Query: 55 HIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKH 113
+ +L R G Y+ F RV GF+AQ D G GR + V EFS
Sbjct: 55 RVKELTRDGFYDGIVFHRVIDGFMAQTGDPTGTGRGG--------SDKPDVNAEFSSAPF 106
Query: 114 VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
RG L M R S PNSA S F I+ D L+GQY VFGKV +G
Sbjct: 107 ERGTLGMARSSSPNSANSQFFIMFADGDWLNGQYTVFGKVVEG 149
>gi|310657879|ref|YP_003935600.1| peptidyl-prolyl cis-trans isomerase B (rotamase B) [[Clostridium]
sticklandii]
gi|308824657|emb|CBH20695.1| peptidyl-prolyl cis-trans isomerase B (rotamase B) [[Clostridium]
sticklandii]
Length = 173
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G+++ YP +AP TV++ LV+ G Y+ F RV +GF+ Q D +
Sbjct: 15 GEVKIELYPHIAPNTVNNFISLVKKGFYDGLIFHRVIQGFMIQGGDP--KGNGTGGPGYG 72
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
++ E + G +++ H G++SM R + P+SA S F ++ +PHLDG YA FG+V +G
Sbjct: 73 IKGEFSKNGHVNNLSHEPGVISMARSAHPDSAGSQFFLMTSVSPHLDGSYAGFGRVVEGM 132
Query: 158 ETLRKLEGLPTR 169
+ + LE + T
Sbjct: 133 DIVEALEKVKTN 144
>gi|418401415|ref|ZP_12974944.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti CCNWSX0020]
gi|359504661|gb|EHK77194.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti CCNWSX0020]
Length = 190
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
Q G + Q G + P +AP+ V I +L G Y+ F RV KGF+AQ DV
Sbjct: 24 QSGENILTVQLEDGPVVIELRPDIAPKHVQQIKELAAAGEYDNVAFHRVIKGFMAQTGDV 83
Query: 85 VGGRSAPMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
G + R ++ + EFSDV RG + M R DP+SA S F I+L
Sbjct: 84 EFGDMKDGFQSDRAGTGGSSKPNLPAEFSDVPFERGTVGMARAQDPDSANSQFFIMLAPG 143
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
L+GQY V GKV +G E + K++ G P I++
Sbjct: 144 DFLNGQYTVVGKVVEGMENVDKIKLGDDANNGAVANPDRMISV 186
>gi|402312798|ref|ZP_10831721.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Lachnospiraceae bacterium ICM7]
gi|400367374|gb|EJP20390.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Lachnospiraceae bacterium ICM7]
Length = 172
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV + L+ Y+ F RV GF+ Q G G P ++
Sbjct: 16 IKIELYPEVAPNTVRNFISLINEKFYDGLTFHRVISGFMIQGGCPQGNGMGGP---DYQI 72
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E G +D+ H RG++SM R PNSA S F I+ DAPHLDG YA FG V +G +
Sbjct: 73 KGEFNQNGFQNDLAHSRGVISMARAMSPNSAGSQFFIMHQDAPHLDGAYAAFGMVIEGMD 132
Query: 159 TLRKLEGLPT 168
+ K+ + T
Sbjct: 133 VVDKIAAVDT 142
>gi|299133972|ref|ZP_07027166.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Afipia sp.
1NLS2]
gi|298591808|gb|EFI52009.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Afipia sp.
1NLS2]
Length = 180
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 4 VIRIFLTL--ITLIGTASSQEDP-QLGSAR-VVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+IR+ L + L A +Q+ P L A +V T G + +AP + I +L
Sbjct: 1 MIRLLAVLGALMLAAPAFAQKLPANLDKANAIVIDTTKGRVVVQLRTDLAPNHAERIKQL 60
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADV-----VGGRSAPMNEVQRVEAEKTVVGEFSDVKHV 114
R G YN F RV GF+AQ D GG P + EFS+V
Sbjct: 61 ARDGYYNNVPFHRVIDGFMAQTGDGKNFNGTGGSKYP-----------NLKAEFSNVPFT 109
Query: 115 RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
RG++ M R SDPNSA S F I+ D P L+G+Y V G V G + + KL+
Sbjct: 110 RGVVGMARASDPNSANSQFFIMFNDYPSLNGKYTVIGNVVSGMDVVDKLK 159
>gi|217979657|ref|YP_002363804.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Methylocella
silvestris BL2]
gi|217505033|gb|ACK52442.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Methylocella
silvestris BL2]
Length = 151
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 70/144 (48%), Gaps = 16/144 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA----DVVG 86
+ +T G + P +AP V HI KLV Y+ F RV GF+AQ G
Sbjct: 8 LTLETTKGPVVIEMRPDLAPGHVAHIKKLVEEKFYDGVVFHRVIDGFMAQTGCPHGTGTG 67
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EF+ HVRG++SM R DPNSA S F I+ DA LD Q
Sbjct: 68 GSKYP-----------NIKAEFNAEPHVRGVVSMARAQDPNSANSQFFIVFNDARFLDKQ 116
Query: 147 YAVFGKVTKGDETLRKLE-GLPTR 169
Y V+GKV G E + K++ G P R
Sbjct: 117 YTVWGKVVSGMENVDKIKRGEPVR 140
>gi|337268662|ref|YP_004612717.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Mesorhizobium
opportunistum WSM2075]
gi|336028972|gb|AEH88623.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Mesorhizobium
opportunistum WSM2075]
Length = 170
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS- 89
++ +T G + P +AP V I +L R G Y+ F RV +GF+AQ DV G S
Sbjct: 11 LIMETTKGKVVIELLPDLAPGHVARIKELAREGAYDGVVFHRVIEGFMAQTGDVKFGNSS 70
Query: 90 ----APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
AP + + EFS+ H RG SM R +PNSA S F I DA L+
Sbjct: 71 KPTFAPSRAGMGGSDKPDLKAEFSNANHGRGTCSMARSQNPNSANSQFFICFDDAAFLNR 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V+G+V +G + + K++
Sbjct: 131 QYTVWGQVIEGMDNVDKIK 149
>gi|407779814|ref|ZP_11127066.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor pacificus pht-3B]
gi|407298433|gb|EKF17573.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor pacificus pht-3B]
Length = 196
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G++ P +AP+ V I +LV G Y+ F RV +GF+AQ DV G
Sbjct: 32 MIIRLKSGEVTVALRPDLAPKHVAQIKELVAAGAYDNVAFHRVIEGFMAQTGDVQFGDVE 91
Query: 91 PMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ +RV + EFSD RG + M R ++ +SA S F I+ APHL+GQ
Sbjct: 92 DGFDARRVGTGGSGRPDLPAEFSDASFERGTVGMARSANLDSANSQFFIMFAPAPHLNGQ 151
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177
Y V G+V G E + +++ + G+ P
Sbjct: 152 YTVIGQVEAGMELIDQIKRGDAAQNGMVQNP 182
>gi|345856506|ref|ZP_08808986.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Desulfosporosinus sp. OT]
gi|344330403|gb|EGW41701.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Desulfosporosinus sp. OT]
Length = 166
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNE 94
N I+ YP VAP TV LV+ G YN F RV GF+ Q D +
Sbjct: 2 ANGDQIKVELYPDVAPNTVKSFVSLVQKGFYNGLIFHRVIPGFMIQGGDPN--GNGTGGP 59
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRY-SDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
++ E T G +++KH RG++SMGR +DP+SA S F I+ P LDG YA FGKV
Sbjct: 60 GYSIKGEFTNNGFVNNLKHERGVISMGRIENDPDSAGSQFFIMADTVPSLDGDYAAFGKV 119
Query: 154 TKGDETLRKL 163
G + + K+
Sbjct: 120 ISGMDAVDKI 129
>gi|414162527|ref|ZP_11418774.1| hypothetical protein HMPREF9697_00675 [Afipia felis ATCC 53690]
gi|410880307|gb|EKS28147.1| hypothetical protein HMPREF9697_00675 [Afipia felis ATCC 53690]
Length = 180
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 4 VIRIFLTL--ITLIGTASSQEDP-QLGSAR-VVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+IR+ L + L A +Q+ P L A +V T G + +AP + I +L
Sbjct: 1 MIRLLAVLGALMLAAPAFAQKLPANLDKANAIVIDTTKGRVVVQLRTDLAPGHAERIKQL 60
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADV-----VGGRSAPMNEVQRVEAEKTVVGEFSDVKHV 114
R G YN F RV +GF+AQ D GG P + EFS+V
Sbjct: 61 ARDGYYNNVPFHRVIEGFMAQTGDGKNFNGTGGSKYP-----------NLKAEFSNVPFT 109
Query: 115 RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
RG++ M R SDPNSA S F I+ D P L+G+Y V G+V G + + KL+
Sbjct: 110 RGVVGMARSSDPNSANSQFFIMFNDYPSLNGKYTVIGQVVSGMDVVDKLK 159
>gi|406666983|ref|ZP_11074746.1| Putative bifunctional phosphatase/peptidyl-prolyl cis-trans
isomerase [Bacillus isronensis B3W22]
gi|405385266|gb|EKB44702.1| Putative bifunctional phosphatase/peptidyl-prolyl cis-trans
isomerase [Bacillus isronensis B3W22]
Length = 213
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTV 104
P AP TV + LV G Y+ F RV GF+ Q D G G P ++ E T
Sbjct: 62 PKTAPNTVANFISLVEDGFYDGLIFHRVIPGFMIQGGDPDGTGMGGPD---YAIKGEFTS 118
Query: 105 VGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
G + + H RG++SM R DP+SA S F I+ A HLDG YA FGKVT+G ET+ ++
Sbjct: 119 NGFENTLTHERGVISMARSQDPDSAGSQFFIMTEQATHLDGDYAAFGKVTEGMETVDEI 177
>gi|77463047|ref|YP_352551.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides 2.4.1]
gi|77387465|gb|ABA78650.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Rhodobacter
sphaeroides 2.4.1]
Length = 197
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G++ P VAP V+ + L R G Y+ F RV +GF+AQ DV G+ N ++R
Sbjct: 52 GEVVIDLLPDVAPAHVERMVTLAREGAYDGVVFHRVIEGFMAQTGDVEFGKG---NNLRR 108
Query: 98 V----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ + EFSDV RG++ M R DPNSA S F I+ L+GQY V G+V
Sbjct: 109 AGTGGSSYPDLPAEFSDVPFTRGVVGMARSDDPNSANSQFFIMFAPGEFLNGQYTVVGRV 168
Query: 154 TKG-DETLRKLEGLPTR 169
+G D R G P R
Sbjct: 169 VQGMDVVDRIARGEPPR 185
>gi|295092618|emb|CBK78725.1| Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
[Clostridium cf. saccharolyticum K10]
Length = 172
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGD-IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GD I+ YP +AP TV++ LV+ G Y+ F RV +GF+ Q G G
Sbjct: 6 VTIEMENGDVIKAELYPEIAPNTVNNFVSLVKKGFYDGLIFHRVIRGFMIQGGCPQGNGT 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E G +D+KH G+LSM R P+SA S F I+ +PHLDG+YA
Sbjct: 66 GGPG---YSIKGEFARNGFKNDLKHTPGVLSMARAMHPDSAGSQFFIMHETSPHLDGEYA 122
Query: 149 VFGKVTKGDETLRKL 163
FG V +G + + K+
Sbjct: 123 AFGHVIEGMDVVNKI 137
>gi|148667663|gb|EDL00080.1| peptidylprolyl isomerase (cyclophilin)-like 3, isoform CRA_c [Mus
musculus]
Length = 174
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
+P V T+ GDI+ + P+T ++ L YN F R KGF+ Q
Sbjct: 8 EPSRRKMSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTG 67
Query: 83 DVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDA 140
D G GR ++ E E + E+ +KH VRG++SM + PN+ S F I G
Sbjct: 68 DPTGTGRGGSSIWAKKFEDEYS---EY--LKHNVRGVVSMAN-NGPNTNGSQFFITYGKQ 121
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
PHLD +Y VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 122 PHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 170
>gi|126461922|ref|YP_001043036.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17029]
gi|126103586|gb|ABN76264.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Rhodobacter
sphaeroides ATCC 17029]
Length = 197
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G++ P VAP V+ + L R G Y+ F RV +GF+AQ DV G+ N ++R
Sbjct: 52 GEVVIDLLPDVAPAHVERMVTLAREGAYDGVVFHRVIEGFMAQTGDVEFGKG---NNLRR 108
Query: 98 V----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ + EFSDV RG++ M R DPNSA S F I+ L+GQY V G+V
Sbjct: 109 AGTGGSSYPDLPAEFSDVPFTRGVVGMARSDDPNSANSQFFIMFAPGEFLNGQYTVVGRV 168
Query: 154 TKG-DETLRKLEGLPTR 169
+G D R G P R
Sbjct: 169 VQGMDVVDRIARGEPPR 185
>gi|154505506|ref|ZP_02042244.1| hypothetical protein RUMGNA_03043 [Ruminococcus gnavus ATCC 29149]
gi|336431652|ref|ZP_08611497.1| hypothetical protein HMPREF0991_00616 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153794164|gb|EDN76584.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruminococcus
gnavus ATCC 29149]
gi|336019925|gb|EGN49643.1| hypothetical protein HMPREF0991_00616 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 172
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 17/141 (12%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ GDI + YP +AP TV + LV+ G Y+ F RV GF+ Q G G
Sbjct: 6 VTFEMENGDIMKAELYPEIAPNTVKNFVSLVKKGFYDGLTFHRVISGFMIQGGCPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEF------SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
P T+ GEF +++ H G+LSM R P+SA S F I+ +PH
Sbjct: 66 GGP---------GYTIKGEFLQNGVTNNLAHDEGVLSMARAMHPDSAGSQFFIMHKKSPH 116
Query: 143 LDGQYAVFGKVTKGDETLRKL 163
LDG YA FGK+T+G + + K+
Sbjct: 117 LDGAYAAFGKITEGMDVVNKI 137
>gi|405376131|ref|ZP_11030089.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF142]
gi|397327374|gb|EJJ31681.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF142]
Length = 190
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q V Q G + P VAP+ V I LV+ G Y+
Sbjct: 12 LYLASFAGDAFAQA----ADHYVTIQLKSGPVVIQLLPDVAPKHVAQIEALVKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVG---------EFSDVKHVRGILS 119
F RV GF+AQ DV G N + +A + G EFS VRG +
Sbjct: 68 AFHRVIPGFMAQTGDVKYG-----NMEKNFDASQAGTGGSDLPDLPAEFSKTPFVRGTVG 122
Query: 120 MGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
M R DPNSA S F I+ D L+GQY V GKV G E + K++
Sbjct: 123 MARAQDPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK 167
>gi|260425947|ref|ZP_05779926.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Citreicella
sp. SE45]
gi|260420439|gb|EEX13690.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Citreicella
sp. SE45]
Length = 183
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEK- 102
+ VAP V I L G Y+ F RV GF+AQ DV G+ + +
Sbjct: 38 LFDDVAPGHVKQITALAEQGAYDGIVFHRVIDGFMAQTGDVEYGKIGSDMRMAGMGGSDL 97
Query: 103 -TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLR 161
+ EFSD RG++ M R +PNSA S F I+ APHLDGQY V G+VT+G + +
Sbjct: 98 PDLKAEFSDKSFDRGVVGMARSQNPNSANSQFFIMFSPAPHLDGQYTVVGEVTRGMDVVD 157
Query: 162 KLEGLPTRKEGIFVMPTERITI 183
++ R + +P + +++
Sbjct: 158 AIKRGTGRNGAVIGLPDQMVSV 179
>gi|167759250|ref|ZP_02431377.1| hypothetical protein CLOSCI_01597 [Clostridium scindens ATCC 35704]
gi|167663124|gb|EDS07254.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
scindens ATCC 35704]
Length = 185
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG-- 87
+ + GDI + YP +AP TV++ LV+ G Y+ F RV GF+ Q GG
Sbjct: 19 ITIEMENGDIMKAELYPEIAPNTVNNFISLVKKGYYDGLIFHRVISGFMIQ-----GGCP 73
Query: 88 -RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ ++ E G +D+ H G+LSM R P+SA S F I+ ++PHL+G
Sbjct: 74 EGTGTGGPGYNIKGEFAQNGFANDLAHTEGVLSMARAMHPDSAGSQFFIMHKNSPHLNGS 133
Query: 147 YAVFGKVTKGDETLRKLEGLPT 168
YA FGK+ G + + K+ PT
Sbjct: 134 YAAFGKIITGMDVVNKIAETPT 155
>gi|290986761|ref|XP_002676092.1| predicted protein [Naegleria gruberi]
gi|284089692|gb|EFC43348.1| predicted protein [Naegleria gruberi]
Length = 159
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V TN GD+ YP + PQT D+ L G YN F R+ KGF+ Q D G GR
Sbjct: 1 VSLHTNLGDLNVELYPYLCPQTCDNFLSLCSRGYYNGVKFHRLIKGFMIQGGDPTGTGRG 60
Query: 90 APMNEVQRVEAEKTVVGEFSD-----VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHL 143
+ GEF D ++H G LSM PN+ +S F I + PHL
Sbjct: 61 ----------GKSIWGGEFKDEISPKLRHDTIGTLSMAN-KGPNTNSSQFFITFKETPHL 109
Query: 144 DGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS-SYYYD 190
D ++ VFGK+ G + L+K+E +P E P E + I + S +Y+
Sbjct: 110 DNKHTVFGKLVGGLKLLQKIENIPVDDED---KPLEDVQIENISIFYN 154
>gi|310815655|ref|YP_003963619.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Ketogulonicigenium vulgare Y25]
gi|385233167|ref|YP_005794509.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Ketogulonicigenium vulgare WSH-001]
gi|308754390|gb|ADO42319.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Ketogulonicigenium vulgare Y25]
gi|343462078|gb|AEM40513.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Ketogulonicigenium vulgare WSH-001]
Length = 185
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G I+ P APQ V+ + L G Y+ F RV GF+AQ DV GR +++R
Sbjct: 33 GTIKIELLPDAAPQHVERLTTLASEGQYDGVVFHRVIDGFMAQTGDVQYGRIG--GDLRR 90
Query: 98 VEAEKTVV----GEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
++ + EFSD+ RG++ M R DPNSA S F I+ L+GQY V G+V
Sbjct: 91 AGTGRSSLPNLPAEFSDIPFERGVVGMARAQDPNSANSQFFIMFAPGDFLNGQYTVVGRV 150
Query: 154 TKGDETLRKLEGLPTRKEGIF-----VMPTERIT 182
T+G E L ++ + G +M T R+T
Sbjct: 151 TEGLEVLDAIKKGSSAANGAVEGAPDIMTTVRVT 184
>gi|153813873|ref|ZP_01966541.1| hypothetical protein RUMTOR_00079 [Ruminococcus torques ATCC 27756]
gi|317502006|ref|ZP_07960190.1| peptidylprolyl cis-trans isomerase [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088176|ref|ZP_08337096.1| hypothetical protein HMPREF1025_00679 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336440011|ref|ZP_08619610.1| hypothetical protein HMPREF0990_02004 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145848269|gb|EDK25187.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruminococcus
torques ATCC 27756]
gi|316896686|gb|EFV18773.1| peptidylprolyl cis-trans isomerase [Lachnospiraceae bacterium
8_1_57FAA]
gi|330408832|gb|EGG88295.1| hypothetical protein HMPREF1025_00679 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336014360|gb|EGN44209.1| hypothetical protein HMPREF0990_02004 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 172
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
V F+ GDI + YP +AP TV++ L+ G Y+ F RV +GF+ Q GG
Sbjct: 6 VTFEMENGDIMKAELYPEIAPNTVNNFISLINKGFYDGLIFHRVIRGFMIQ-----GGCP 60
Query: 90 APMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
A K GEF+ D+ H G+LSM R P+SA S F I+ +PHL
Sbjct: 61 NGNGMGGPGYAIK---GEFAQNGFQNDLAHDPGVLSMARAMHPDSAGSQFFIMHEKSPHL 117
Query: 144 DGQYAVFGKVTKGDETLRKL 163
DG YA FGK+T+G + + K+
Sbjct: 118 DGAYAAFGKITEGMDIVNKI 137
>gi|194337883|ref|YP_002019677.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194310360|gb|ACF45060.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Pelodictyon
phaeoclathratiforme BU-1]
Length = 188
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 5 IRIFLTLITLIGTASSQEDPQLGSARVVF-QTNYGDIEFGFYPSVAPQTVDHIFKLVRLG 63
I +F L+ I + P L A ++ G + P +AP+ V+ I L R G
Sbjct: 9 IALFFGLLAGILPLAVHASPSLDPANTIYLDLPSGRVVIQMRPDIAPRHVERIKVLTRKG 68
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRY 123
Y+ F RV GF+AQ D P+ + + + + EFS V H RG +SM R
Sbjct: 69 FYDGLSFHRVIPGFMAQTGD-------PLGDGS-GGSGQQLKAEFSPVHHNRGTVSMARA 120
Query: 124 SDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTE 179
S +SA S F I P LDGQY V+G+V G E + K++ + G+ PT+
Sbjct: 121 SGVDSADSQFFICFDQLPFLDGQYTVWGRVVSGMEFVEKVKAGASYNNGMVTNPTK 176
>gi|336422164|ref|ZP_08602316.1| hypothetical protein HMPREF0993_01693 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009074|gb|EGN39072.1| hypothetical protein HMPREF0993_01693 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 172
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG-- 87
+ + GDI + YP +AP TV++ LV+ G Y+ F RV GF+ Q GG
Sbjct: 6 ITIEMENGDIMKAELYPEIAPNTVNNFISLVKKGYYDGLIFHRVISGFMIQ-----GGCP 60
Query: 88 -RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ ++ E G +D+ H G+LSM R P+SA S F I+ ++PHL+G
Sbjct: 61 EGTGTGGPGYNIKGEFAQNGFANDLAHTEGVLSMARAMHPDSAGSQFFIMHKNSPHLNGS 120
Query: 147 YAVFGKVTKGDETLRKLEGLPT 168
YA FGK+ G + + K+ PT
Sbjct: 121 YAAFGKIITGMDVVNKIADTPT 142
>gi|126651946|ref|ZP_01724138.1| Peptidyl-prolyl cis-transisomerase, cyclophilin family protein
[Bacillus sp. B14905]
gi|126591215|gb|EAZ85324.1| Peptidyl-prolyl cis-transisomerase, cyclophilin family protein
[Bacillus sp. B14905]
Length = 222
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTV 104
P++AP TV + LV+ G Y+ F RV F+ Q D G G P ++ E +
Sbjct: 71 PTIAPNTVANFISLVKEGFYDGLIFHRVIPDFMIQGGDPSGNGTGGPD---YSIDGEFSS 127
Query: 105 VGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
G + +KH RG++SM R DPNSA S F I++ ++ +LDG YA FGKV +G ET+ +
Sbjct: 128 NGWDNSLKHERGVISMARSKDPNSAGSQFFIMVKESTNLDGDYAAFGKVLEGMETVDAI 186
>gi|332653786|ref|ZP_08419530.1| peptidyl-prolyl cis-trans isomerase B (PPIase B)(Rotamase B)
[Ruminococcaceae bacterium D16]
gi|332516872|gb|EGJ46477.1| peptidyl-prolyl cis-trans isomerase B (PPIase B)(Rotamase B)
[Ruminococcaceae bacterium D16]
Length = 176
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 16/122 (13%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP VAP TV++ L++ G Y+ F RV GF+ Q G G P ++
Sbjct: 24 LYPDVAPNTVNNFISLIQKGYYDGLIFHRVIPGFMIQGGCPDGTGMGGPGYSIK------ 77
Query: 103 TVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
GEF+ +++H RG+LSM R P+SA S F I++ APHLDGQYA FGKV +G
Sbjct: 78 ---GEFTQNRFPNELRHDRGVLSMARTMAPDSAGSQFFIMVEQAPHLDGQYASFGKVIEG 134
Query: 157 DE 158
E
Sbjct: 135 ME 136
>gi|153813331|ref|ZP_01965999.1| hypothetical protein RUMOBE_03748 [Ruminococcus obeum ATCC 29174]
gi|149830621|gb|EDM85712.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruminococcus
obeum ATCC 29174]
Length = 176
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ LV+ G Y+ F RV GF+ Q G G P ++ A+
Sbjct: 24 LYPEIAPNTVNNFISLVKKGFYDGLIFHRVINGFMIQGGCPDGTGMGGPGYSIKGEFAQN 83
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
+ +++ H G+LSM R PNS S F I+ APHLDG YA FGKV +G + + K
Sbjct: 84 GIA---NNLAHTPGVLSMARAMHPNSGGSQFFIMHKAAPHLDGSYAAFGKVIEGMDVVNK 140
Query: 163 L 163
+
Sbjct: 141 I 141
>gi|144899941|emb|CAM76805.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Magnetospirillum gryphiswaldense MSR-1]
Length = 179
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +G + P +AP+ V+ I +L R G YN F RV +GF+AQ D
Sbjct: 29 LIMDLPWGQVVIEMRPDLAPKHVERIKELTRKGFYNGTPFHRVIEGFMAQGGDPT----- 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ + EFS VRG++ M R S PNSA S F I+L AP LDG+Y ++
Sbjct: 84 ---GTGTGGSGTKLAAEFSGEHFVRGVVGMARASSPNSADSQFYIMLASAPSLDGKYTIW 140
Query: 151 GKVTKGDETLRKL 163
G V +G E + ++
Sbjct: 141 GNVIQGMEHVDRI 153
>gi|254420731|ref|ZP_05034455.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Brevundimonas sp. BAL3]
gi|196186908|gb|EDX81884.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Brevundimonas sp. BAL3]
Length = 153
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 39 DIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQR 97
D+ P +AP V+ I +L G Y+ F RV GF+AQ D G G S
Sbjct: 18 DVVIKLRPDLAPGHVERITELASEGFYDGVVFHRVIAGFMAQGGDPTGTGTSG------- 70
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ + EFS HVRG+ SM R +DPNSA S F I L DA LD QY V+G+V G
Sbjct: 71 -SKKPNLKAEFSAEPHVRGVCSMARTADPNSANSQFFICLDDATFLDRQYTVWGEVESGM 129
Query: 158 ETLRKL-EGLPTRKEGIFVMPT 178
E + L +G P R G V T
Sbjct: 130 EHVDALPKGEPPRAPGKIVKAT 151
>gi|323526550|ref|YP_004228703.1| peptidylprolyl isomerase [Burkholderia sp. CCGE1001]
gi|323383552|gb|ADX55643.1| Peptidylprolyl isomerase [Burkholderia sp. CCGE1001]
Length = 194
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+ +T+ GDI YP AP+TV + V+ G Y+ F RV +GF
Sbjct: 19 AFAQSGSQAAHPSVLLKTSEGDIRVELYPEKAPKTVANFLDYVKSGQYSGTIFHRVIRGF 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q G + ++ + + +K+ G L+M R SDPNSA + F I
Sbjct: 79 MIQ------GGGYTQSFAEKPTRAPIPLESRNGLKNTAGTLAMARTSDPNSATAQFFINT 132
Query: 138 GDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
D P+ DG YAVFGKVT G + ++K+E PT G + +P + I I S+
Sbjct: 133 VDNAGLDYPNPDGNGYAVFGKVTSGMDVVKKIEATPTTTRGPMGDVPQKPIVIESA 188
>gi|296810538|ref|XP_002845607.1| peptidyl-prolyl cis-trans isomerase cyp15 [Arthroderma otae CBS
113480]
gi|238842995|gb|EEQ32657.1| peptidyl-prolyl cis-trans isomerase cyp15 [Arthroderma otae CBS
113480]
Length = 631
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 16/152 (10%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
++G++ + T GDI +PSVAP+TV++ + G YN F RV + F+ Q D
Sbjct: 477 EIGTS-AILHTTLGDIHLRLFPSVAPKTVENFVTHSKNGYYNNTIFHRVIRKFMIQAGDP 535
Query: 85 VG----GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGD 139
+G G S E + EFS +KH + LSM + PN+ AS F I
Sbjct: 536 LGDGTGGESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNASQFFITTEK 585
Query: 140 APHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
AP LDG + +FG+ KG + + K+E + T KE
Sbjct: 586 APWLDGHHTIFGRAVKGLDVVHKIENVKTHKE 617
>gi|350270230|ref|YP_004881538.1| peptidyl-prolyl cis-trans isomerase B [Oscillibacter valericigenes
Sjm18-20]
gi|348595072|dbj|BAK99032.1| peptidyl-prolyl cis-trans isomerase B [Oscillibacter valericigenes
Sjm18-20]
Length = 179
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 66/126 (52%), Gaps = 16/126 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP AP TV++ L G Y+ F R GF+ Q GG P+ T
Sbjct: 23 LYPDKAPNTVNNFIALANSGYYDKLIFHRCIPGFMIQ-----GG--CPL-GTGTGGPGYT 74
Query: 104 VVGEFS-------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ GEFS D+ H G+LSM R PNSA S F I++ DAPHLDGQYA FGKV +G
Sbjct: 75 IHGEFSGNGFQKNDLIHTLGVLSMARTMAPNSAGSQFFIMVDDAPHLDGQYAAFGKVFEG 134
Query: 157 -DETLR 161
DE +R
Sbjct: 135 EDEAVR 140
>gi|334346045|ref|YP_004554597.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sphingobium
chlorophenolicum L-1]
gi|334102667|gb|AEG50091.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sphingobium
chlorophenolicum L-1]
Length = 150
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VGGRSAPMN 93
GD+ P +AP V+ I L + G Y+ F RV GF+AQ D +GG P
Sbjct: 14 GDVVIKLRPDLAPGHVERITALAKDGFYDGVVFHRVIPGFMAQGGDPTGTGMGGSKLP-- 71
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ EFS HVRG+ SM R +PNSA S F I DA LDGQY V+G+V
Sbjct: 72 ---------DLKAEFSREPHVRGVCSMARAMNPNSANSQFFICFDDATFLDGQYTVWGEV 122
Query: 154 TKGDETLRKL-EGLPTRKEGIFVMPT 178
T G E + L +G P + G V T
Sbjct: 123 TSGMEHVDALPKGEPPKTPGKIVKAT 148
>gi|326922601|ref|XP_003207537.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like
[Meleagris gallopavo]
Length = 161
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D +G G+
Sbjct: 3 VTLHTDVGDIKIELFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPLGTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
++ E E FS+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GTSIWGKKFEDE------FSEYLKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKY 115
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTER---ITIHSS 186
VFGKV G ETL +LE LP ++ + R ITIH++
Sbjct: 116 TVFGKVIDGLETLDELEKLPVNEKTYRPLNDVRIKDITIHAN 157
>gi|339233244|ref|XP_003381739.1| peptidylprolyl isomerase domain and WD repeat-containing protein 1
[Trichinella spiralis]
gi|316979410|gb|EFV62207.1| peptidylprolyl isomerase domain and WD repeat-containing protein 1
[Trichinella spiralis]
Length = 620
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ T++GDI+ YP + P+ V++ L + G YN + F RV K F+ Q D G S
Sbjct: 441 CIIHTSFGDIQCELYPKLCPKAVENFCTLAKRGYYNMHIFHRVIKSFIIQTGDPTGSGSG 500
Query: 91 PMNEVQRVEAEKTVVGEFSD-----VKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLD 144
E +F D +KH R +LSM PN+ S F I + APHLD
Sbjct: 501 ---------GESIWGSDFEDEFHPSLKHDRPYMLSMAN-CGPNTNGSQFFITVVPAPHLD 550
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTR 169
G++ +FG+VTKG E ++ + + T
Sbjct: 551 GKHTIFGRVTKGMEIVQNINQVKTN 575
>gi|254463826|ref|ZP_05077237.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Rhodobacterales bacterium Y4I]
gi|206684734|gb|EDZ45216.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Rhodobacterales bacterium Y4I]
Length = 182
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA-PMNEVQ 96
G I+ + VAP+ V+ I L G Y+ F RV +GF+AQ DV G++ M
Sbjct: 31 GTIQIDLFEDVAPKHVEQITALAEAGQYDGVVFHRVIEGFMAQTGDVEFGKAGGDMRRAG 90
Query: 97 RVEAEK-TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+ +++ + EFSD+ + RG++ M R P+SA S F I+ P LDGQY V GKVT
Sbjct: 91 QGGSDRPDLAAEFSDITYDRGVVGMARSQSPDSANSQFFIMFAPGPFLDGQYTVVGKVTG 150
Query: 156 G 156
G
Sbjct: 151 G 151
>gi|170694945|ref|ZP_02886094.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
graminis C4D1M]
gi|170140043|gb|EDT08222.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
graminis C4D1M]
Length = 194
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+ +T+ GDI YP AP+TV + V+ G Y+ F RV +GF
Sbjct: 19 AFAQSGSQAAHPSVLLKTSEGDIRVELYPEKAPKTVANFLDYVKSGQYSGTIFHRVIRGF 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q G + ++ + + +K+ G L+M R SDPNSA + F I
Sbjct: 79 MIQ------GGGYTQSFAEKPTRAPIPLESRNGLKNTMGTLAMARTSDPNSATAQFFINT 132
Query: 138 GDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
D P+ DG YAVFGKVT G + ++K+E PT G + +P + I I S+
Sbjct: 133 VDNAGLDYPNPDGNGYAVFGKVTSGMDVVKKIEAAPTTTRGPMGDVPQKPIVIESA 188
>gi|338974416|ref|ZP_08629777.1| peptidyl-prolyl cis-trans isomerase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338232503|gb|EGP07632.1| peptidyl-prolyl cis-trans isomerase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 180
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 4 VIRIFLTLITLI--GTASSQEDPQ-LGSAR-VVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+IRI L + A SQ P L A +V T G + P +AP+ + I +L
Sbjct: 1 MIRILAVLAAFVFATPAFSQALPAGLDKANAIVIDTTKGRVIVKLRPDLAPKHAERIKQL 60
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADV-----VGGRSAPMNEVQRVEAEKTVVGEFSDVKHV 114
R G YN F RV +GF+AQ D GG P + EFS+V
Sbjct: 61 ARDGYYNNVPFHRVIEGFMAQTGDGQRFNGTGGSKYP-----------NLPAEFSNVPFK 109
Query: 115 RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
RGI+ M R SDPNSA S F I+ D L+G+Y V G+V G + + K++
Sbjct: 110 RGIVGMARASDPNSANSQFFIMFADGSFLNGKYTVVGEVVSGMDVVDKIK 159
>gi|347736294|ref|ZP_08868970.1| peptidylprolyl isomerase [Azospirillum amazonense Y2]
gi|346920256|gb|EGY01432.1| peptidylprolyl isomerase [Azospirillum amazonense Y2]
Length = 158
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ----VADVVGGRSAPMN 93
G + P +AP V I +L R G YN F RV +GF+AQ + D GG
Sbjct: 14 GRVVIALRPDLAPNHVARIKELARDGFYNGLSFHRVIEGFMAQGGCPIGDGTGGSG---- 69
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
K + EFS HVRG+ SM R +P+SA S F I DA LD QY V+GKV
Sbjct: 70 --------KKLKAEFSAEPHVRGVCSMARAMNPDSADSQFFICFDDATFLDRQYTVWGKV 121
Query: 154 TKGDETLRKLEGLPTRKEGIFVMPTERITIH 184
T+G E + L+ R G P + + +
Sbjct: 122 TEGMEFVDALKKGSRRDNGSVTDPDKIVKMQ 152
>gi|422347631|ref|ZP_16428542.1| hypothetical protein HMPREF9476_02615 [Clostridium perfringens
WAL-14572]
gi|373223901|gb|EHP46245.1| hypothetical protein HMPREF9476_02615 [Clostridium perfringens
WAL-14572]
Length = 170
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99
I+ YP +AP TV + LV+ G Y+ F R+ GF+ Q G + N R++
Sbjct: 15 IKIELYPEIAPNTVRNFVSLVKKGFYDGLTFHRIIPGFMIQGGCPEG--TGMGNPGYRIK 72
Query: 100 AEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDET 159
E T +++KH RG++SM R + +SA S F I+ ++PHLDGQYA FGKV +G +
Sbjct: 73 GEFTKNQFPNNLKHSRGVISMARAMNFDSAGSQFFIMHENSPHLDGQYASFGKVIEGMDV 132
Query: 160 LRKLEGLPT 168
+ K+ + T
Sbjct: 133 VDKIANVKT 141
>gi|269140591|ref|YP_003297292.1| peptidyl-prolyl cis-trans isomerase A [Edwardsiella tarda EIB202]
gi|387869065|ref|YP_005700534.1| Peptidyl-prolyl cis-trans isomerase ppiA [Edwardsiella tarda
FL6-60]
gi|267986252|gb|ACY86081.1| peptidyl-prolyl cis-trans isomerase A [Edwardsiella tarda EIB202]
gi|304560378|gb|ADM43042.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor [Edwardsiella
tarda FL6-60]
Length = 188
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
RI +TL+TL A+ + RV+ T+ G+IE Y AP TVD+ V G Y
Sbjct: 4 RIVITLVTLFSLAAMAPAALAANTRVMLTTSVGNIELELYNQKAPVTVDNFLGYVNSGYY 63
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYS 124
N F RV GF+ Q G ++Q+ + + E + ++++RG ++M R +
Sbjct: 64 NGTIFHRVIPGFMIQGGGFTG-------DMQQKATQPPIKNEADNGLRNLRGTIAMARTA 116
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
+ +SA S F I + D LD GQ YAVFGKV KG + + K+ T G + +P
Sbjct: 117 EKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVIKGMDVVDKISQARTENVGPYQNVPA 176
Query: 179 ERITIHSS 186
+ I I S+
Sbjct: 177 KPIVITSA 184
>gi|418054866|ref|ZP_12692921.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Hyphomicrobium denitrificans 1NES1]
gi|353210448|gb|EHB75849.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Hyphomicrobium denitrificans 1NES1]
Length = 158
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T+ G + P +AP+ V+ I L R G Y+ F RV GF+AQ GR
Sbjct: 11 LIIETSKGPVVIELRPDLAPKHVERIKTLAREGFYDGIVFHRVIDGFMAQTG-CPQGRGT 69
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+++ + AE F+ HVRG+ SM R +PNSA S F I+ DA LD QY V+
Sbjct: 70 GSSKLPNLPAE------FNAEPHVRGVCSMARAQNPNSANSQFFIVFDDATFLDKQYTVW 123
Query: 151 GKVTKGDETLRKL 163
GKV G E + K+
Sbjct: 124 GKVISGMENVDKI 136
>gi|325109453|ref|YP_004270521.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Planctomyces
brasiliensis DSM 5305]
gi|324969721|gb|ADY60499.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Planctomyces
brasiliensis DSM 5305]
Length = 179
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+V +T G I + + AP+ +I L ++G Y+ R+ FV Q+
Sbjct: 24 QVELETTRGKILLDTWYNEAPEHCKNIVGLAKIGFYDGIIAHRIIPDFVVQIG------- 76
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
P N T+ EF+D H G+LSM R SDPNSA S F I LG PHLDGQY V
Sbjct: 77 CP-NGTGTGGPGYTIDAEFNDRPHEPGVLSMARTSDPNSAGSQFFICLGRIPHLDGQYTV 135
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSS 186
FGK T E+L + G+ P E I I +S
Sbjct: 136 FGK-TADQESLDVVLGMANVDTNNQDKPLEDIKITAS 171
>gi|167563292|ref|ZP_02356208.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
oklahomensis EO147]
Length = 191
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G + P VAP V+ I LVR Y+ F RV GF+AQ D G + + +
Sbjct: 40 GIVTIKLNPDVAPNHVNRIKSLVRAKFYDAMPFARVVDGFMAQTGDPRKGTDVDLASLPK 99
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ AE FS + RG + M R +PNSA F + L DA LDG+Y FGKVT G
Sbjct: 100 LNAE------FSHLPFERGTVGMARSRNPNSACHQFFVTLADAAFLDGRYTAFGKVTSGM 153
Query: 158 ETLRKLE-GLP 167
E + +L G+P
Sbjct: 154 ELIDQLRLGVP 164
>gi|15965336|ref|NP_385689.1| peptidyl-prolyl cis-trans isomerase A [Sinorhizobium meliloti 1021]
gi|334316217|ref|YP_004548836.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti AK83]
gi|384529332|ref|YP_005713420.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti BL225C]
gi|384536417|ref|YP_005720502.1| putative peptidyl-prolyl cis-trans isomerase A signal peptide
protein [Sinorhizobium meliloti SM11]
gi|407720526|ref|YP_006840188.1| peptidyl-prolyl cis-trans isomerase [Sinorhizobium meliloti Rm41]
gi|433613357|ref|YP_007190155.1| Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Sinorhizobium meliloti GR4]
gi|15074516|emb|CAC46162.1| Putative peptidyl-prolyl cis-trans isomerase A signal peptide
protein [Sinorhizobium meliloti 1021]
gi|333811508|gb|AEG04177.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
meliloti BL225C]
gi|334095211|gb|AEG53222.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
meliloti AK83]
gi|336033309|gb|AEH79241.1| putative peptidyl-prolyl cis-trans isomerase A signal peptide
protein [Sinorhizobium meliloti SM11]
gi|407318758|emb|CCM67362.1| putative peptidyl-prolyl cis-trans isomerase [Sinorhizobium
meliloti Rm41]
gi|429551547|gb|AGA06556.1| Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Sinorhizobium meliloti GR4]
Length = 190
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
Q G + Q G + P +AP+ V I +L G Y+ F RV KGF+AQ DV
Sbjct: 24 QSGENILTVQLEDGPVVIELRPDIAPKHVQQIKELAAAGEYDNVAFHRVIKGFMAQTGDV 83
Query: 85 VGGRSAPMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
G + R ++ + EFSDV RG + M R DP+SA S F I+L
Sbjct: 84 EFGDMKDGFQGDRAGTGGSSKPNLPAEFSDVPFERGTVGMARAQDPDSANSQFFIMLAPG 143
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
L+GQY V GKV +G E + K++ G P I++
Sbjct: 144 DFLNGQYTVVGKVVEGMENVDKIKLGDDANNGAVADPDRMISV 186
>gi|410634619|ref|ZP_11345253.1| peptidyl-prolyl cis-trans isomerase-like 1 [Glaciecola arctica
BSs20135]
gi|410145823|dbj|GAC22120.1| peptidyl-prolyl cis-trans isomerase-like 1 [Glaciecola arctica
BSs20135]
Length = 220
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 70/138 (50%), Gaps = 13/138 (9%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMN 93
TN G+I P +AP V L LG Y+ F R+ GF+AQ D +G GR P
Sbjct: 75 TNKGEIVIELMPDIAPMHVSSTLYLTTLGFYDNTIFHRIIPGFMAQGGDPIGTGRGNPGY 134
Query: 94 EVQRVEAEKTVVGEFSD-VKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
+ GEFSD KH +G +LSM S PN+ S F + P LDG++ +FG
Sbjct: 135 KY---------AGEFSDDFKHTQGGMLSMAN-SGPNTDGSQFFLTFTATPWLDGKHTIFG 184
Query: 152 KVTKGDETLRKLEGLPTR 169
+V KG E L +E L +R
Sbjct: 185 QVVKGMEVLESIEKLGSR 202
>gi|110798744|ref|YP_697255.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
perfringens ATCC 13124]
gi|168209807|ref|ZP_02635432.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens B str. ATCC 3626]
gi|110673391|gb|ABG82378.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens ATCC 13124]
gi|170712088|gb|EDT24270.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens B str. ATCC 3626]
Length = 170
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99
I+ YP +AP TV + LV+ G Y+ F R+ GF+ Q G + N R++
Sbjct: 15 IKIELYPEIAPNTVRNFVSLVKKGFYDGLTFHRIIPGFMIQGGCPEG--TGMGNPGYRIK 72
Query: 100 AEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDET 159
E T +++KH RG++SM R + +SA S F I+ ++PHLDGQYA FGKV +G +
Sbjct: 73 GEFTRNQFQNNLKHSRGVISMARAMNFDSAGSQFFIMHENSPHLDGQYASFGKVIEGMDV 132
Query: 160 LRKLEGLPT 168
+ K+ + T
Sbjct: 133 VDKIANVKT 141
>gi|148260181|ref|YP_001234308.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Acidiphilium
cryptum JF-5]
gi|326402877|ref|YP_004282958.1| putative peptidyl-prolyl cis-trans isomerase [Acidiphilium
multivorum AIU301]
gi|338989456|ref|ZP_08634297.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Acidiphilium
sp. PM]
gi|146401862|gb|ABQ30389.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Acidiphilium
cryptum JF-5]
gi|325049738|dbj|BAJ80076.1| putative peptidyl-prolyl cis-trans isomerase [Acidiphilium
multivorum AIU301]
gi|338205620|gb|EGO93915.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type [Acidiphilium
sp. PM]
Length = 184
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 37 YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQ 96
+G + P +AP+T + I L G YN FFRV GF+AQ D P N
Sbjct: 41 FGVVTIELRPDLAPKTCEQIRTLTARGFYNGCEFFRVIAGFMAQTGD-------PTNTGT 93
Query: 97 RVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
V EF+D K + G + M R SDPNS S F I A LDGQY +FG+VT
Sbjct: 94 GGSNLPNVPAEFTDKAKFLTGSVGMARTSDPNSGNSQFFICFAPAAWLDGQYTLFGQVTA 153
Query: 156 G 156
G
Sbjct: 154 G 154
>gi|260587649|ref|ZP_05853562.1| peptidyl-prolyl cis-trans isomerase A [Blautia hansenii DSM 20583]
gi|331084061|ref|ZP_08333168.1| hypothetical protein HMPREF0992_02092 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541914|gb|EEX22483.1| peptidyl-prolyl cis-trans isomerase A [Blautia hansenii DSM 20583]
gi|330402423|gb|EGG81993.1| hypothetical protein HMPREF0992_02092 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 191
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 14/134 (10%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG I+ P AP TV++ L G Y+ F R+ GF+ Q D +G +
Sbjct: 38 DYGTIKAELDPKQAPITVENFISLAEEGFYDGLTFHRIMDGFMMQGGDPLGNGTGG---- 93
Query: 96 QRVEAEKTVVGEFSD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+E+T+ GEFS + H +G LSM R P+SA+S F I+ D+ LDGQYA
Sbjct: 94 ----SEETIKGEFSQNGVDNTISHKKGTLSMARSQAPDSASSQFFIVDEDSTFLDGQYAA 149
Query: 150 FGKVTKGDETLRKL 163
FG VT+G E + K+
Sbjct: 150 FGHVTEGIEIVDKI 163
>gi|18311548|ref|NP_563482.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Clostridium
perfringens str. 13]
gi|110802076|ref|YP_699817.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens SM101]
gi|168213493|ref|ZP_02639118.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens CPE str. F4969]
gi|422875511|ref|ZP_16921996.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens F262]
gi|18146232|dbj|BAB82272.1| peptidyl-prolyl cis-trans isomerase B [Clostridium perfringens str.
13]
gi|110682577|gb|ABG85947.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens SM101]
gi|170715013|gb|EDT27195.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens CPE str. F4969]
gi|380303569|gb|EIA15871.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens F262]
Length = 170
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99
I+ YP +AP TV + LV+ G Y+ F R+ GF+ Q G + N R++
Sbjct: 15 IKIELYPEIAPNTVRNFVSLVKKGFYDGLTFHRIIPGFMIQGGCPEG--TGMGNPGYRIK 72
Query: 100 AEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDET 159
E T +++KH RG++SM R + +SA S F I+ ++PHLDGQYA FGKV +G +
Sbjct: 73 GEFTRNQFPNNLKHSRGVISMARAMNFDSAGSQFFIMHENSPHLDGQYASFGKVIEGMDV 132
Query: 160 LRKLEGLPT 168
+ K+ + T
Sbjct: 133 VDKIANVKT 141
>gi|327357144|gb|EGE86001.1| peptidyl-prolyl cis-trans isomerase cypE [Ajellomyces dermatitidis
ATCC 18188]
Length = 634
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
TA++ P V T GDI +PS AP+TV++ R G YN F RV +
Sbjct: 471 TAATAAKPAETGTAAVLHTTLGDIHLRLFPSAAPKTVENFVTHARNGYYNNTIFHRVIRK 530
Query: 77 FVAQVADVV----GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAAS 131
F+ Q D + GG S E + EFS ++H + LSM + PN+ S
Sbjct: 531 FMIQAGDPLGDGTGGESIWGGEFE---------DEFSTLRHDKPYTLSMAN-AGPNTNGS 580
Query: 132 SFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
F I P LDG++ +FG+ KG + + K+E + T KE P E + I S
Sbjct: 581 QFFITTEKTPWLDGKHTIFGRAVKGLDVVHKIENVKTYKE----KPEEEVKIVS 630
>gi|261199015|ref|XP_002625909.1| peptidyl-prolyl cis-trans isomerase cypE [Ajellomyces dermatitidis
SLH14081]
gi|239595061|gb|EEQ77642.1| peptidyl-prolyl cis-trans isomerase cypE [Ajellomyces dermatitidis
SLH14081]
gi|239609826|gb|EEQ86813.1| peptidyl-prolyl cis-trans isomerase cypE [Ajellomyces dermatitidis
ER-3]
Length = 629
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
TA++ P V T GDI +PS AP+TV++ R G YN F RV +
Sbjct: 466 TAATAAKPAETGTAAVLHTTLGDIHLRLFPSAAPKTVENFVTHARNGYYNNTIFHRVIRK 525
Query: 77 FVAQVADVV----GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAAS 131
F+ Q D + GG S E + EFS ++H + LSM + PN+ S
Sbjct: 526 FMIQAGDPLGDGTGGESIWGGEFE---------DEFSTLRHDKPYTLSMAN-AGPNTNGS 575
Query: 132 SFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
F I P LDG++ +FG+ KG + + K+E + T KE P E + I S
Sbjct: 576 QFFITTEKTPWLDGKHTIFGRAVKGLDVVHKIENVKTYKE----KPEEEVKIVS 625
>gi|168217331|ref|ZP_02642956.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens NCTC 8239]
gi|182380586|gb|EDT78065.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens NCTC 8239]
Length = 170
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99
I+ YP +AP TV + LV+ G Y+ F R+ GF+ Q G + N R++
Sbjct: 15 IKIELYPEIAPNTVRNFVSLVKKGFYDGLTFHRIIPGFMIQGGCPEG--TGMGNPGYRIK 72
Query: 100 AEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDET 159
E T +++KH RG++SM R + +SA S F I+ ++PHLDGQYA FGKV +G +
Sbjct: 73 GEFTRNQFPNNLKHSRGVISMARAMNFDSAGSQFFIMHENSPHLDGQYASFGKVIEGMDV 132
Query: 160 LRKLEGLPT 168
+ K+ + T
Sbjct: 133 VDKIANVKT 141
>gi|21746159|ref|NP_081627.1| peptidyl-prolyl cis-trans isomerase-like 3 isoform 1 [Mus musculus]
gi|73921767|sp|Q9D6L8.1|PPIL3_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 3;
Short=PPIase; AltName: Full=CYP10L; AltName:
Full=Cyclophilin-like protein PPIL3; AltName:
Full=Rotamase PPIL3
gi|12845482|dbj|BAB26768.1| unnamed protein product [Mus musculus]
gi|38174298|gb|AAH60993.1| Peptidylprolyl isomerase (cyclophilin)-like 3 [Mus musculus]
gi|38511419|gb|AAH61645.1| Ppil3 protein [Mus musculus]
gi|148667660|gb|EDL00077.1| peptidylprolyl isomerase (cyclophilin)-like 3, isoform CRA_a [Mus
musculus]
gi|148667662|gb|EDL00079.1| peptidylprolyl isomerase (cyclophilin)-like 3, isoform CRA_a [Mus
musculus]
Length = 161
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GSSIWAKKFEDEYS---EY--LKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 117 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 157
>gi|440226641|ref|YP_007333732.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhizobium
tropici CIAT 899]
gi|440038152|gb|AGB71186.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhizobium
tropici CIAT 899]
Length = 190
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ Q G + P VAP+ V I L + G Y+ F RV GF+AQ DV G ++
Sbjct: 30 LTIQLKDGPVVIQLMPEVAPKHVAQIEALAKKGAYDNVVFHRVIDGFMAQTGDVQYGNAS 89
Query: 91 PMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ + + + EFS V RG++ M R DPNSA S F I+ D L+GQ
Sbjct: 90 KGFDPNKAGTGGSDLPNLPAEFSKVPFTRGVVGMARAQDPNSANSQFFIMFADGAFLNGQ 149
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEG 172
Y V GKV G E + K++ R EG
Sbjct: 150 YTVVGKVISGMELVDKIK----RGEG 171
>gi|224543697|ref|ZP_03684236.1| hypothetical protein CATMIT_02907 [Catenibacterium mitsuokai DSM
15897]
gi|224523350|gb|EEF92455.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Catenibacterium mitsuokai DSM 15897]
Length = 161
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNE--VQRVEAE 101
YP VAP TV++ L++ ++ F RV GF+ Q GG + E ++ E
Sbjct: 20 LYPEVAPITVENFVNLIKNNFFDGLIFHRVIPGFMIQG----GGYDTDLKEHPAASIKGE 75
Query: 102 KTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLR 161
G +++KH RG+LSM R +SA+S F I+ DAPHLDG YA FG +T+G E +
Sbjct: 76 FASNGVTNNLKHTRGVLSMARTMVKDSASSQFFIMHADAPHLDGDYAAFGLITEGLEEVD 135
Query: 162 KL 163
K+
Sbjct: 136 KI 137
>gi|383640171|ref|ZP_09952577.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sphingomonas
elodea ATCC 31461]
Length = 151
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VG 86
+V + GD+ P +AP V I L G Y+ F RV GF+AQ D +G
Sbjct: 7 LVLTLDTGDVRIRLRPDLAPNHVARIAGLADEGFYDGVIFHRVIDGFMAQGGDPSGTGMG 66
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EFS +H RG+ SM R +PNSA S F I L DA LDGQ
Sbjct: 67 GSDKP-----------DLAQEFSKERHARGVCSMARTMNPNSANSQFFICLDDASFLDGQ 115
Query: 147 YAVFGKVTKGDETLRKL-EGLPTRKEGIFV 175
Y V+G+V G E + L +G P G V
Sbjct: 116 YTVWGEVVDGMEHVDALPKGEPPATPGKIV 145
>gi|166007046|pdb|2OJU|A Chain A, X-Ray Structure Of Complex Of Human Cyclophilin J With
Cyclosporin A
gi|166007047|pdb|2OJU|B Chain B, X-Ray Structure Of Complex Of Human Cyclophilin J With
Cyclosporin A
Length = 167
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G
Sbjct: 5 GGMSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTG 64
Query: 87 -GRSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
GR ++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD
Sbjct: 65 TGRGGNSIWGKKFEDEYS---EY--LKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLD 118
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
+Y VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 119 MKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 163
>gi|317057611|ref|YP_004106078.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ruminococcus
albus 7]
gi|315449880|gb|ADU23444.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Ruminococcus
albus 7]
Length = 242
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 49 APQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEF 108
AP T + KLV G Y+ F RV GF+AQ D G + E ++ E G
Sbjct: 82 APITCKNFKKLVNSGFYDGLTFHRVIDGFMAQGGDPEGNGTGGSGE--NIKGEFDSNGVE 139
Query: 109 SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGL-- 166
+D+KHVRG +SM R DP+SA+S F I D LDG YA FG+VT+G E + + +
Sbjct: 140 NDLKHVRGTVSMARSQDPDSASSQFFICYDDCAALDGDYAAFGQVTEGMEVVDRFLNVER 199
Query: 167 PTRKEGIFVMPTERITI 183
++G P ITI
Sbjct: 200 TMGQDGQISSPVTPITI 216
>gi|393722934|ref|ZP_10342861.1| peptidyl-prolyl cis-trans isomerase B [Sphingomonas sp. PAMC 26605]
Length = 157
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD+ +APQ V I +L G Y+ F RV GF+AQ D G +
Sbjct: 20 GDVVIKLRGDLAPQHVARIAELANAGFYDGVVFHRVIPGFMAQGGDPTG------TGMHG 73
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ + EFS HVRG SM R DPNSA S F I DA LD QY V+G+VT G
Sbjct: 74 SKNHANLPAEFSKEPHVRGTASMARAQDPNSANSQFFICFDDARFLDNQYTVWGQVTSGM 133
Query: 158 ETLRKL-EGLPTRKEG 172
E + L +G P R G
Sbjct: 134 EHVDALPKGEPPRTPG 149
>gi|30793618|gb|AAP40333.1|AF448142_1 glucuronan lyase [Sinorhizobium meliloti]
Length = 169
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + +P +AP V I +L R G Y+ F RV F+AQ DV G+
Sbjct: 11 ILMETTKGKVVIALFPDLAPGHVARIKELSREGAYDGVVFHRVIADFMAQTGDVKFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS HVRG SM R PNSA S F I DAP L+
Sbjct: 71 GDSFNPGRAGMGGSDKPDLKAEFSATPHVRGTCSMARSQSPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + +++
Sbjct: 131 QYSVWGQVIEGMDIIDQIK 149
>gi|336435346|ref|ZP_08615061.1| hypothetical protein HMPREF0988_00646 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336000799|gb|EGN30945.1| hypothetical protein HMPREF0988_00646 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 172
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
V F+ GDI + YP +AP TV + LV G Y+ F RV +GF+ Q GG
Sbjct: 6 VTFEMENGDIMKAELYPEIAPNTVRNFVSLVNKGYYDGLIFHRVIRGFMIQ-----GGCP 60
Query: 90 APMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
+ GEFS D+ H G+LSM R P+SA S F I+ +PHL
Sbjct: 61 N---GTGTGGPGYNIKGEFSQNGFKNDLAHDPGVLSMARAMHPDSAGSQFFIMHEKSPHL 117
Query: 144 DGQYAVFGKVTKGDETLRKL 163
DG YA FGK+T+G + + K+
Sbjct: 118 DGAYAAFGKITEGMDIVNKI 137
>gi|307729277|ref|YP_003906501.1| Peptidylprolyl isomerase [Burkholderia sp. CCGE1003]
gi|307583812|gb|ADN57210.1| Peptidylprolyl isomerase [Burkholderia sp. CCGE1003]
Length = 194
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+ +T+ GDI YP AP+TV + V+ G Y+ F RV +GF
Sbjct: 19 AFAQSGSQAAHPSVLLKTSEGDIRVELYPEKAPKTVANFLDYVKSGQYSGTIFHRVIRGF 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q GG + E + + + +K+ G L+M R SDPNSA + F I
Sbjct: 79 MIQ----GGGYTQSFAE--KPTRAPIPLESRNGLKNTVGTLAMARTSDPNSATAQFFINT 132
Query: 138 GDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
D P+ DG YAVFGKVT G + ++K+E PT G + +P + I I S+
Sbjct: 133 VDNAGLDYPNPDGNGYAVFGKVTSGMDVVKKIEAAPTTTRGPMGDVPQKPIVIESA 188
>gi|302382742|ref|YP_003818565.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Brevundimonas
subvibrioides ATCC 15264]
gi|302193370|gb|ADL00942.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Brevundimonas
subvibrioides ATCC 15264]
Length = 149
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96
GD+ P +AP V I +L G Y+ F RV GF+AQ D G G S
Sbjct: 13 GDVVIKLRPDLAPGHVARITELASEGFYDGVVFHRVIPGFMAQGGDPTGTGTSG------ 66
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ + EFS+ HVRGI SM R + P++A S F I+ DA LDGQY V+G+V +G
Sbjct: 67 --SKKPNLKAEFSNEPHVRGICSMARTNQPDTANSQFFIVFDDATFLDGQYTVWGEVIEG 124
Query: 157 DETLRKL-EGLPTRKEGIFVMPT 178
+ + L +G P R G V T
Sbjct: 125 MDHVDALPKGEPPRNPGKIVKAT 147
>gi|418935839|ref|ZP_13489591.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhizobium sp.
PDO1-076]
gi|375057456|gb|EHS53628.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhizobium sp.
PDO1-076]
Length = 189
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
++++ F + +GTA +Q + + Q G + P +AP+ V I +L
Sbjct: 3 LVHLATAFFLAVAGLGTAQAQSNDDF----LTIQLKDGPVVIQLMPDIAPKHVAQIKELA 58
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV----GEFSDVKHVRG 116
+ G Y+ F RV +GF+AQ DV G + R + + EFS V RG
Sbjct: 59 KKGEYDNVAFHRVIEGFMAQTGDVQFGDMENGFDGSRAGTGGSSMPDLPAEFSSVPFERG 118
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
+ M R DPNSA S F I+ D L+GQY V GKV G + + K++ R EG
Sbjct: 119 TIGMARSQDPNSANSQFFIMFADGGFLNGQYTVVGKVVAGMDAVDKIK----RGEG 170
>gi|309792375|ref|ZP_07686843.1| Peptidylprolyl isomerase [Oscillochloris trichoides DG-6]
gi|308225596|gb|EFO79356.1| Peptidylprolyl isomerase [Oscillochloris trichoides DG6]
Length = 245
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNE 94
T GDI P++APQTV++ L R YN + RV F+AQ D G +
Sbjct: 97 TPRGDIVIELLPNIAPQTVNNFVFLARQNFYNGLTWHRVLPNFMAQGGDPNGDGTG---- 152
Query: 95 VQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
+A ++ EF+D GI++M R SDPNSA S F I G+A L+GQY +FG+
Sbjct: 153 ----DAGYSIPAEFTDQIAFDQPGIVAMARSSDPNSAGSQFFITTGNAAWLNGQYTIFGR 208
Query: 153 VTKGDETLRKLEGLPTR 169
V G + + G+P R
Sbjct: 209 VISGQDVVN---GIPLR 222
>gi|167574566|ref|ZP_02367440.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
oklahomensis C6786]
Length = 149
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G + P VAP V+ I LVR Y+ F RV GF+AQ D G + + +
Sbjct: 6 GIVTIKLNPDVAPNHVNRIKSLVRAKFYDAMPFARVVDGFMAQTGDPRKGTDVDLASLPK 65
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ AE FS + RG + M R +PNSA F + L DA LDG+Y FGKVT G
Sbjct: 66 LNAE------FSHLPFERGTVGMARSRNPNSACHQFFVTLADAAFLDGRYTAFGKVTSGM 119
Query: 158 ETLRKLE-GLP 167
E + +L G+P
Sbjct: 120 ELIDQLRLGVP 130
>gi|449270482|gb|EMC81150.1| Peptidyl-prolyl cis-trans isomerase-like 3, partial [Columba livia]
Length = 161
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GD++ + P+T ++ L YN F R KGF+ Q D +G G+
Sbjct: 3 VTLHTDVGDVKIELFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPLGTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
N + + E EFS+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 G--NSIWGKKFED----EFSEYLKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKY 115
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTER---ITIHSS 186
VFGKV G ETL +LE LP ++ + R ITIH++
Sbjct: 116 TVFGKVIDGLETLDELEKLPVNEKTYRPLNDVRIKDITIHAN 157
>gi|266620094|ref|ZP_06113029.1| peptidylprolyl cis-trans isomerase, cyclophilin-type [Clostridium
hathewayi DSM 13479]
gi|288868323|gb|EFD00622.1| peptidylprolyl cis-trans isomerase, cyclophilin-type [Clostridium
hathewayi DSM 13479]
Length = 172
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ LV+ G Y+ F RV GF+ Q G G P ++ E
Sbjct: 20 LYPEIAPNTVNNFISLVKKGFYDGLIFHRVINGFMIQGGCPDGNGMGGPG---YSIKGEF 76
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
+ G + KH G+LSM R PNSA S F I+ +PHLDG YA FGK+ +G + + K
Sbjct: 77 SQNGFSNAFKHTEGVLSMARAMSPNSAGSQFFIMHKVSPHLDGAYAAFGKIIEGMDVVNK 136
Query: 163 L 163
+
Sbjct: 137 I 137
>gi|253995881|ref|YP_003047945.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Methylotenera
mobilis JLW8]
gi|253982560|gb|ACT47418.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Methylotenera
mobilis JLW8]
Length = 189
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 7 IFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYN 66
IFLTL+ L GTA + +PQ VVF+TN G+ YP AP+TV + V G Y
Sbjct: 6 IFLTLMLLSGTAMA-ANPQ-----VVFETNRGNFIVELYPDKAPKTVANFLAYVNSGFYQ 59
Query: 67 TNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSD 125
F RV K F+ Q GG +A M+E E +V E ++ + + G ++M R SD
Sbjct: 60 DTIFHRVIKRFMIQ----GGGFNADMSE---KETRAPIVNESNNGLTNEIGTIAMARTSD 112
Query: 126 PNSAASSFSILLGDAPHLDGQ--------YAVFGKVTKGDETLRKLEGLPTRKEGIF-VM 176
P+SA S F I L + L+ Q Y VFG+V KG + +R + T G + +
Sbjct: 113 PDSATSQFFINLENNQFLNYQSPDAQLIGYCVFGRVLKGMDVVRDIAATSTANVGPYGDV 172
Query: 177 PTERITIH 184
P I +H
Sbjct: 173 PRSPIVVH 180
>gi|50122991|ref|YP_052158.1| peptidyl-prolyl cis-trans isomerase A [Pectobacterium atrosepticum
SCRI1043]
gi|49613517|emb|CAG76968.1| peptidyl-prolyl cis-trans isomerase A [Pectobacterium atrosepticum
SCRI1043]
Length = 189
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 11 LITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHF 70
LI+L TA S G+ V+ T+ G+IE AP +V + + V G YN F
Sbjct: 12 LISL--TAFSPAFAASGTTHVLLTTSAGNIELSLDNQKAPISVKNFVEYVNNGFYNGTTF 69
Query: 71 FRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNS 128
RV GF+ Q GG S MN+ +A + +D +++ RG ++M R SD +S
Sbjct: 70 HRVIPGFMVQ----GGGFSGEMNQ----KAPNAPIKNEADNGLRNQRGTIAMARTSDKDS 121
Query: 129 AASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERIT 182
A S F I + D LD GQ YAVFGKV KG E + K+ +PT+ G + +PT I
Sbjct: 122 ATSQFFINIADNAFLDHGQRDFGYAVFGKVVKGMEVVDKISQVPTKNVGPYQNVPTTPIV 181
Query: 183 IHS 185
I S
Sbjct: 182 IQS 184
>gi|398353851|ref|YP_006399315.1| peptidyl-prolyl cis-trans isomerase Ppi [Sinorhizobium fredii USDA
257]
gi|390129177|gb|AFL52558.1| putative peptidyl-prolyl cis-trans isomerase Ppi [Sinorhizobium
fredii USDA 257]
Length = 190
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 78/186 (41%), Gaps = 30/186 (16%)
Query: 13 TLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFR 72
T G A +Q + + + G + P +AP+ V+ I L G Y+ F R
Sbjct: 16 TFTGGAQAQSSDNI----LTIELKDGPVAIELRPDIAPKHVEQIKALATAGEYDNVAFHR 71
Query: 73 VDKGFVAQVADV---------------VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGI 117
V KGF+AQ DV GG S P + EFSDV RG
Sbjct: 72 VIKGFMAQTGDVQYGDMKDGVQPELAGTGGSSKP-----------DLPAEFSDVPFERGT 120
Query: 118 LSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177
+ M R DPNSA S F I+ L+GQY V GKV +G E + K++ G P
Sbjct: 121 IGMARSQDPNSANSQFFIMFAPGDFLNGQYTVVGKVVEGMENVDKIKLGDEANNGAVTDP 180
Query: 178 TERITI 183
I++
Sbjct: 181 DRMISV 186
>gi|170699313|ref|ZP_02890362.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
ambifaria IOP40-10]
gi|170135805|gb|EDT04084.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
ambifaria IOP40-10]
Length = 191
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTSQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K++ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFEEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNGGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+EG+ T G +P + I I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEGVATTSRGPMQDVPAQPILIESA 186
>gi|115352166|ref|YP_774005.1| peptidyl-prolyl isomerase [Burkholderia ambifaria AMMD]
gi|115282154|gb|ABI87671.1| Peptidylprolyl isomerase [Burkholderia ambifaria AMMD]
Length = 191
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTSQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K++ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFEEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNNGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+EG+ T G +P + I I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEGVATTSRGPMQDVPAQPILIESA 186
>gi|420242475|ref|ZP_14746515.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF080]
gi|398067372|gb|EJL58889.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF080]
Length = 190
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV----G 86
+ Q G + P VAP+ V I L G Y+ F RV GF+AQ DV G
Sbjct: 29 LTIQLKDGPVVIQLMPEVAPKHVAQIKALAAKGEYDNVVFHRVINGFMAQTGDVQFGKQG 88
Query: 87 GRS-APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G+S P + EFS V RG++ M R DPNSA S F I+ P LDG
Sbjct: 89 GKSFNPARAGMGGSEMPNIPAEFSKVPFERGVVGMARSQDPNSANSQFFIMFTKYPSLDG 148
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V GKV G E + K++
Sbjct: 149 QYTVVGKVVSGMELVDKIK 167
>gi|400593379|gb|EJP61329.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [Beauveria
bassiana ARSEF 2860]
Length = 623
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
+ GSA V T YGDI +P AP+TV++ + G YN F RV + F+ Q D
Sbjct: 469 ETGSA-AVLHTTYGDIHLRLFPDAAPKTVENFVTHAKQGYYNNTIFHRVIRKFMIQCGDP 527
Query: 85 VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
+G + + R A+ EFS +KH + + PN+ S F I P LD
Sbjct: 528 LGDGTGGESIWGREFAD-----EFSSLKHDKPYTVSMANAGPNTNGSQFFITTEKTPWLD 582
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
G++ +FG+ T+G + ++K+E T KE P E I I
Sbjct: 583 GKHTIFGRATQGFDVIQKIENTRTFKE----KPEEDIKI 617
>gi|208658290|gb|ACI30652.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Beauveria
bassiana]
Length = 623
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
+ GSA V T YGDI +P AP+TV++ + G YN F RV + F+ Q D
Sbjct: 469 ETGSA-AVLHTTYGDIHLRLFPDAAPKTVENFVTHAKQGYYNNTIFHRVIRKFMIQCGDP 527
Query: 85 VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
+G + + R A+ EFS +KH + + PN+ S F I P LD
Sbjct: 528 LGDGTGGESIWGREFAD-----EFSSLKHDKPYTVSMANAGPNTNGSQFFITTEKTPWLD 582
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
G++ +FG+ T+G + ++K+E T KE P E I I
Sbjct: 583 GKHTIFGRATQGFDVIQKIENTRTFKE----KPEEDIKI 617
>gi|169830140|ref|YP_001700298.1| peptidyl-prolyl cis-trans isomerase-like 1 [Lysinibacillus
sphaericus C3-41]
gi|168994628|gb|ACA42168.1| Peptidyl-prolyl cis-trans isomerase-like 1 [Lysinibacillus
sphaericus C3-41]
Length = 215
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTV 104
P+VAP TV + LV G Y+ F RV F+ Q D G G P ++ E +
Sbjct: 64 PTVAPNTVANFISLVEEGFYDGLIFHRVIPDFMIQGGDPSGNGTGGPD---YSIDGEFSS 120
Query: 105 VGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
G + +KH RG++SM R DPNSA S F I++ + LDG+YA FGKV +G ET+ +
Sbjct: 121 NGWDNSLKHERGVISMARSQDPNSAGSQFFIMVKETTDLDGKYAAFGKVIEGMETVDAI 179
>gi|325290553|ref|YP_004266734.1| peptidyl-prolyl isomerase [Syntrophobotulus glycolicus DSM 8271]
gi|324965954|gb|ADY56733.1| Peptidylprolyl isomerase [Syntrophobotulus glycolicus DSM 8271]
Length = 172
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 66/127 (51%), Gaps = 14/127 (11%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N G I+ YP AP TV + L++ G Y+ F RV GF+ Q GG P N
Sbjct: 12 NGGIIKAELYPEAAPNTVRNFVSLIKKGFYDGLIFHRVIPGFMIQ-----GG--CP-NGS 63
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ GEFS D+ H RG+LSM R D +SA S F I++ DA HLDG YA
Sbjct: 64 GMGGPGYGIKGEFSSNGIKNDLIHTRGVLSMARSQDNDSAGSQFFIMVEDADHLDGLYAA 123
Query: 150 FGKVTKG 156
FGKV +G
Sbjct: 124 FGKVIEG 130
>gi|167756670|ref|ZP_02428797.1| hypothetical protein CLORAM_02208 [Clostridium ramosum DSM 1402]
gi|237733958|ref|ZP_04564439.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|365832966|ref|ZP_09374492.1| hypothetical protein HMPREF1021_03256 [Coprobacillus sp. 3_3_56FAA]
gi|374627683|ref|ZP_09700086.1| hypothetical protein HMPREF0978_03406 [Coprobacillus sp.
8_2_54BFAA]
gi|167702845|gb|EDS17424.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
ramosum DSM 1402]
gi|229383039|gb|EEO33130.1| conserved hypothetical protein [Coprobacillus sp. D7]
gi|365259799|gb|EHM89782.1| hypothetical protein HMPREF1021_03256 [Coprobacillus sp. 3_3_56FAA]
gi|373913131|gb|EHQ44973.1| hypothetical protein HMPREF0978_03406 [Coprobacillus sp.
8_2_54BFAA]
Length = 203
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 86/174 (49%), Gaps = 22/174 (12%)
Query: 4 VIRIFLTLITLIGTASSQEDPQLGSARVVFQT--------NYGDIEFGFYPSVAPQTVDH 55
V+ + L+L G ++ ++D + S ++ +YG I+ AP TV +
Sbjct: 10 VMLLALSLAGCGGKSNDEQDKKTASKDLLSGNYRIEIDVKDYGVIKVELQADEAPITVTN 69
Query: 56 IFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD----- 110
KLV+ G Y+ F R+ GF+ Q D G + +E T+ GEFS
Sbjct: 70 FVKLVKEGFYDGLTFHRIIDGFMIQGGDPKGNGTGGSDE--------TIKGEFSSNGVEN 121
Query: 111 -VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
+KH RG +SM R SDP+SA+S F I+ LDG YAVFG V +G E + K+
Sbjct: 122 PLKHTRGAISMARSSDPDSASSQFFIMHQTTTSLDGDYAVFGYVYEGIEVVDKI 175
>gi|386783574|gb|AFJ24915.1| peptidyl-prolyl cis-trans isomerase E [Beauveria bassiana]
Length = 623
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
+ GSA V T YGDI +P AP+TV++ + G YN F RV + F+ Q D
Sbjct: 469 ETGSA-AVLHTTYGDIHLRLFPDAAPKTVENFVTHAKQGYYNNTIFHRVIRKFMIQCGDP 527
Query: 85 VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
+G + + R A+ EFS +KH + + PN+ S F I P LD
Sbjct: 528 LGDGTGGESIWGREFAD-----EFSSLKHDKPYTVSMANAGPNTNGSQFFITTEKTPWLD 582
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
G++ +FG+ T+G + ++K+E T KE P E I I
Sbjct: 583 GKHTIFGRATQGFDVIQKIENTRTFKE----KPEEDIKI 617
>gi|254252006|ref|ZP_04945324.1| Peptidyl-prolyl cis-trans isomerase [Burkholderia dolosa AUO158]
gi|124894615|gb|EAY68495.1| Peptidyl-prolyl cis-trans isomerase [Burkholderia dolosa AUO158]
Length = 191
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTSQGDIRVELYPEKAPKTVANFLDYVKSGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K++ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFDEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNSGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+E +PT G +P + + I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIESVPTTSRGPMQDVPVQPVVIESA 186
>gi|393773028|ref|ZP_10361427.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Novosphingobium sp. Rr 2-17]
gi|392721410|gb|EIZ78876.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Novosphingobium sp. Rr 2-17]
Length = 156
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 74/142 (52%), Gaps = 8/142 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD++ P +AP V+ I +L G Y+ F RV GF+AQ GG P
Sbjct: 18 GDVKIKLRPDLAPGHVERIKELTNEGFYDGVKFHRVIPGFMAQ-----GG--CPDGTGMG 70
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ + EF+ +HVRG+ SM R S PNSA S F I+ DA LD QY V+G+V +G
Sbjct: 71 GSKKPDLKAEFNAERHVRGVCSMARTSAPNSANSQFFIVFDDASFLDKQYTVWGQVVEGM 130
Query: 158 ETLRKL-EGLPTRKEGIFVMPT 178
E + L +G P R+ G V T
Sbjct: 131 EHVDALPKGEPPREPGKIVKAT 152
>gi|319408724|emb|CBI82381.1| peptidyl prolyl cis-trans isomerase [Bartonella schoenbuchensis R1]
Length = 193
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
M+ IRIF L ++ S + V+ N GDI P +AP+ V I +L
Sbjct: 1 MIVYIRIFAILTCIVHLFSFNALANEHNTLVLSLKN-GDIVIRLRPDLAPKHVARIKQLT 59
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRV----EAEKTVVGEFSDVKHVR 115
+ G YN F RV GF+AQ DV G+ + +++RV +V EFS R
Sbjct: 60 QEGAYNNVVFHRVIPGFMAQTGDVKFGKKDSTDFDLKRVGMGGSDYPNLVAEFSKQPFKR 119
Query: 116 GILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFV 175
G + M R DP+SA S F I DA L+ QY V G+V KG + + K++ G
Sbjct: 120 GTVGMARSQDPHSANSQFFICFDDATFLNEQYTVVGEVVKGMDVVDKIKKGTVSNNGSVT 179
Query: 176 MPTERITIH 184
P T H
Sbjct: 180 NPDVIDTAH 188
>gi|387902617|ref|YP_006332956.1| peptidyl-prolyl cis-trans isomerase ppiA precursor [Burkholderia
sp. KJ006]
gi|387577509|gb|AFJ86225.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor [Burkholderia
sp. KJ006]
Length = 191
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTSQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K++ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFEEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNSGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+EG+ T G +P + + I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEGVATTSRGPMQDVPAQPVVIESA 186
>gi|153853817|ref|ZP_01995173.1| hypothetical protein DORLON_01164 [Dorea longicatena DSM 13814]
gi|149753567|gb|EDM63498.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Dorea
longicatena DSM 13814]
Length = 172
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V + GDI + YP VAP TV++ LV+ G Y+ F RV GF+ Q G G
Sbjct: 6 VTIEMENGDIMKAELYPEVAPNTVNNFVSLVKKGYYDGLIFHRVINGFMIQGGCPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
P T+ GEF+ ++ H G+LSM R P+SA S F I+ APH
Sbjct: 66 GGP---------GYTIKGEFAQNGFANNLAHTEGVLSMARAMHPDSAGSQFFIMHKAAPH 116
Query: 143 LDGQYAVFGKVTKGDETLRKL 163
LDG YA FGK+ +G + + K+
Sbjct: 117 LDGAYAAFGKIIEGMDIVNKI 137
>gi|56605962|ref|NP_001008475.1| peptidyl-prolyl cis-trans isomerase-like 3 [Gallus gallus]
gi|73921765|sp|Q5ZLV2.1|PPIL3_CHICK RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 3;
Short=PPIase; AltName: Full=Cyclophilin-like protein
PPIL3; AltName: Full=Rotamase PPIL3
gi|53128320|emb|CAG31291.1| hypothetical protein RCJMB04_4l15 [Gallus gallus]
Length = 161
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D +G G+
Sbjct: 3 VTLHTDVGDIKIELFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPLGTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
++ E E FS+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GTSIWGKKFEDE------FSEYLKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKY 115
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 116 TVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 157
>gi|114768826|ref|ZP_01446452.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Rhodobacterales bacterium HTCC2255]
gi|114549743|gb|EAU52624.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Rhodobacterales bacterium HTCC2255]
Length = 193
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV-- 95
G IE P+VAP V+ I L R G YN F RV GF+AQ DV G+
Sbjct: 39 GIIEIQLLPNVAPLHVERIKILARDGLYNDVVFHRVIDGFMAQTGDVKFGKVEGYKRRYA 98
Query: 96 -QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
Q + EFS +K+ +G + M R +PNSA S F I+ +P+LDG Y V G V
Sbjct: 99 GQGGSNYPDLDAEFSTLKYEKGTVGMARAQNPNSANSQFFIMFNSSPNLDGNYTVIGNVI 158
Query: 155 KGDETLRKLEGLPTRKEGIFVMP 177
KG + + ++ G + P
Sbjct: 159 KGQDVVNSIKRGAMSDNGSVIDP 181
>gi|300023680|ref|YP_003756291.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525501|gb|ADJ23970.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Hyphomicrobium denitrificans ATCC 51888]
Length = 158
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T+ G + P +AP+ V+ I L R G Y+ F RV GF+AQ GR
Sbjct: 11 LLIETSKGPVVIELRPDLAPKHVERIKTLAREGFYDGIVFHRVIDGFMAQTG-CPQGRGT 69
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+++ + AE F+ H+RGI SM R +PNSA S F I+ DA LD QY V+
Sbjct: 70 GSSKLPNLPAE------FNAEPHIRGICSMARAQNPNSANSQFFIVFDDARFLDKQYTVW 123
Query: 151 GKVTKGDETLRKL 163
GKV G E + K+
Sbjct: 124 GKVISGMENVDKI 136
>gi|154505891|ref|ZP_02042629.1| hypothetical protein RUMGNA_03433 [Ruminococcus gnavus ATCC 29149]
gi|153793909|gb|EDN76329.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruminococcus
gnavus ATCC 29149]
Length = 208
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 14/134 (10%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG I AP TV + L + G Y+ F R+ GF+ Q D G +
Sbjct: 55 DYGTITVELDADTAPITVTNFVNLAKDGFYDNLTFHRIMDGFMIQGGDPNGDGTGG---- 110
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
A++T+ GEFS ++ H RG +SM R DP+SA+S F I+ D+ +LDG YA
Sbjct: 111 ----ADQTIKGEFSSNGVENEISHTRGTISMARAQDPDSASSQFFIVQEDSDYLDGNYAA 166
Query: 150 FGKVTKGDETLRKL 163
FG VT G E + ++
Sbjct: 167 FGHVTSGMEIVDQI 180
>gi|255526928|ref|ZP_05393823.1| Peptidylprolyl isomerase [Clostridium carboxidivorans P7]
gi|296184897|ref|ZP_06853308.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
carboxidivorans P7]
gi|255509376|gb|EET85721.1| Peptidylprolyl isomerase [Clostridium carboxidivorans P7]
gi|296050679|gb|EFG90102.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
carboxidivorans P7]
Length = 218
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 7/131 (5%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N +I+ YP AP TV++ LV G YN F RV F+ Q G G P +
Sbjct: 56 NGDEIKVELYPKAAPNTVNNFIYLVNKGFYNGLTFHRVIPKFMIQGGCPKGDGTGGPGYK 115
Query: 95 VQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
++ AE FS+ +KH RG++SM R + +SA S F I+ GDA LDG+YA FGK
Sbjct: 116 IKGEFAENG----FSENGLKHTRGVISMARSQENDSAGSQFFIMHGDAASLDGKYAAFGK 171
Query: 153 VTKGDETLRKL 163
V KG + + K+
Sbjct: 172 VIKGMDVVDKI 182
>gi|224543292|ref|ZP_03683831.1| hypothetical protein CATMIT_02492 [Catenibacterium mitsuokai DSM
15897]
gi|224523825|gb|EEF92930.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Catenibacterium mitsuokai DSM 15897]
Length = 293
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
NYG I+ + AP TV + L G YN F R+ KGF+ Q D G +
Sbjct: 138 NYGSIKLKLDANTAPITVSNFVGLANDGFYNGLTFHRIIKGFMIQGGDPNGDGTGG---- 193
Query: 96 QRVEAEKTVVGEFSD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
++ T+ GEFS +KH RG++SM R +SA+S F I+ DAP LDG+YA
Sbjct: 194 ----SKDTIKGEFSSNGVDNPLKHTRGVISMARSQSNDSASSQFFIMHEDAPSLDGEYAA 249
Query: 150 FGKVTKGDETLRKL 163
FG G E + K+
Sbjct: 250 FGCAYSGMEIVDKI 263
>gi|28190012|gb|AAO32944.1|AF315803_1 CYP10L [Mus musculus]
Length = 161
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 3 VTLHTDVGDIKIEVFCERTPRTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GSSIWAKKFEDEYS---EY--LKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKE 171
VFGKV G ETL +LE LP ++
Sbjct: 117 VFGKVIDGLETLDELEKLPVNEK 139
>gi|390464717|ref|XP_002749663.2| PREDICTED: peptidyl-prolyl cis-trans isomerase C isoform 1
[Callithrix jacchus]
Length = 328
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 170 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 229
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
N + + E E+S+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 230 G--NSIWGKKFED----EYSEYLKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKY 282
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 283 TVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 324
>gi|322698500|gb|EFY90270.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Metarhizium
acridum CQMa 102]
Length = 626
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ----VA 82
GSA V TNYGDI +P AP+TV++ G YN F RV K F+ Q +
Sbjct: 474 GSA-AVLHTNYGDIHIRLFPEAAPKTVENFVTHANNGYYNNTIFHRVIKKFMIQGGDPLG 532
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
D GG S E + EFS +KH + + PN+ S F I P
Sbjct: 533 DGTGGESIWGKEFE---------DEFSSLKHDKPFTVSMANAGPNTNGSQFFITTEKTPW 583
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
LDG++ +FG+ T+G + ++ +E + T KE P E I I
Sbjct: 584 LDGKHTIFGRATQGFDVIQNIENVRTYKE----KPEEDIKI 620
>gi|103486636|ref|YP_616197.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sphingopyxis
alaskensis RB2256]
gi|98976713|gb|ABF52864.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Sphingopyxis
alaskensis RB2256]
Length = 148
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
S + + GD+ P +AP V+ I L + G Y+ F RV GF+AQ D G
Sbjct: 2 SDTLTLSLSTGDVVIRLRPDLAPLHVERISTLAQQGFYDGVVFHRVIPGFMAQGGDPTG- 60
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
M Q + + EF+ HVRG+ SM R +PNSA S F I DA LD QY
Sbjct: 61 --TGMGGSQLPDLPQ----EFNSEPHVRGVCSMARAQNPNSANSQFFICFEDARFLDNQY 114
Query: 148 AVFGKVTKGDETLRKL-EGLPTRKEGIFVMPT 178
V+G+V +G E + L +G P R+ G V T
Sbjct: 115 TVWGEVIEGMEHVDALPKGEPPREPGTIVKAT 146
>gi|404483924|ref|ZP_11019139.1| hypothetical protein HMPREF1135_02199 [Clostridiales bacterium
OBRC5-5]
gi|404342936|gb|EJZ69305.1| hypothetical protein HMPREF1135_02199 [Clostridiales bacterium
OBRC5-5]
Length = 172
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRV 98
I+ YP VAP TV + L+ Y+ F RV GF+ Q G G P ++
Sbjct: 16 IKIELYPEVAPNTVRNFISLINEKFYDGLTFHRVISGFMIQGGCPQGNGMGGP---DYQI 72
Query: 99 EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
+ E G +D+ H RG++SM R PNSA S F I+ DAPHLDG YA FG V +G +
Sbjct: 73 KGEFNQNGFQNDLAHSRGVISMARAMSPNSAGSQFFIMHQDAPHLDGAYAAFGMVIEGMD 132
Query: 159 TLRKLEGLPT 168
+ ++ T
Sbjct: 133 VVDRIAAADT 142
>gi|393720042|ref|ZP_10339969.1| peptidyl-prolyl cis-trans isomerase B [Sphingomonas echinoides ATCC
14820]
Length = 156
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD+ +AP V I +L G Y+ F RV GF+AQ D P
Sbjct: 20 GDVVIKLRGDLAPNHVARIAELANDGFYDGVVFHRVIPGFMAQGGD-------PTGTGMH 72
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ + EFS HVRG+ SM R PNSA S F I DA LDGQY V+G+VT G
Sbjct: 73 GSDKPNLAAEFSKEPHVRGVASMARAQSPNSANSQFFICFDDARFLDGQYTVWGEVTSGM 132
Query: 158 ETLRKL-EGLPTRKEGIFV 175
E + L +G P R+ G V
Sbjct: 133 EHVDALPKGEPPREPGKIV 151
>gi|260587150|ref|ZP_05853063.1| peptidylprolyl cis-trans isomerase, cyclophilin-type [Blautia
hansenii DSM 20583]
gi|260542345|gb|EEX22914.1| peptidylprolyl cis-trans isomerase, cyclophilin-type [Blautia
hansenii DSM 20583]
Length = 172
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ L++ G Y+ F RV GF+ Q G G P ++
Sbjct: 20 LYPEIAPNTVNNFISLIKDGFYDGLIFHRVICGFMIQGGCPDGTGMGGPGYSIK------ 73
Query: 103 TVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
GEFS ++ H G+LSM R PNSA S F I+ +PHLDG YA FGK+T+G
Sbjct: 74 ---GEFSQNHFENNLAHTPGVLSMARAMHPNSAGSQFFIMHEASPHLDGAYAAFGKITEG 130
Query: 157 DETLRKL 163
+ + K+
Sbjct: 131 MDVVNKI 137
>gi|167586798|ref|ZP_02379186.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
ubonensis Bu]
Length = 191
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q GG A
Sbjct: 30 VQLKTSQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ----GGGYKA 85
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
+E + + + +K+ G ++M R SDPNSA + F I D P+ DG
Sbjct: 86 NFDE--KPTRAPIPLESRNGLKNTLGTIAMARTSDPNSATAQFFINTVDNGGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
YAVFGKV G + ++K+E +PT G + +P + + I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEAVPTTVRGPMRDVPEQAVLIESA 186
>gi|414173647|ref|ZP_11428274.1| hypothetical protein HMPREF9695_01920 [Afipia broomeae ATCC 49717]
gi|410890281|gb|EKS38080.1| hypothetical protein HMPREF9695_01920 [Afipia broomeae ATCC 49717]
Length = 180
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 4 VIRIF--LTLITLIGTASSQEDPQ-LGSAR-VVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+IRIF L I A SQ P L A +V T G + +APQ + I +L
Sbjct: 1 MIRIFAVLAAIVFATPAFSQALPAGLDKANAIVIDTTKGRVIVKLRTDLAPQHAERIKQL 60
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADV-----VGGRSAPMNEVQRVEAEKTVVGEFSDVKHV 114
R G YN F RV +GF+AQ D GG P + EFS+V
Sbjct: 61 ARDGYYNNVPFHRVIEGFMAQTGDGQRFNGTGGSKYP-----------NLPAEFSNVPFK 109
Query: 115 RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
RGI+ M R S+PNSA S F I DA L+G+Y V G+V G + + K++
Sbjct: 110 RGIVGMARSSEPNSANSQFFITYADASFLNGKYTVVGEVVSGMDVVDKIK 159
>gi|339488780|ref|YP_004703308.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas putida S16]
gi|338839623|gb|AEJ14428.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas putida S16]
Length = 185
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ T++G +E AP + + + V G YN F RV GF+ Q GG
Sbjct: 24 TPHVLLDTSFGQVEIELNAEKAPISTKNFLQYVDSGFYNNTIFHRVIPGFMVQ----GGG 79
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGD----APHL 143
+ M + + + K G + +++ RG LSM R S+PNSA S F I + D P
Sbjct: 80 FTEQMVQKETQDPIKNEAG--NGLQNTRGTLSMARTSNPNSATSQFFINVADNDFLNPGR 137
Query: 144 DGQYAVFGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
D YAVFGKVTKG E + ++ PT K+G+ +P + + I S+ D
Sbjct: 138 DAGYAVFGKVTKGMEVVDQIVNSPTTVKKGMRDVPADPVYIKSAKRID 185
>gi|408379624|ref|ZP_11177217.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Agrobacterium albertimagni AOL15]
gi|407746435|gb|EKF57958.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Agrobacterium albertimagni AOL15]
Length = 169
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + +P +AP V I +L R G Y+ F RV F+AQ DV G+
Sbjct: 11 ILMETTKGKVVIALFPDLAPGHVARIKELSREGAYDGVVFHRVIPDFMAQTGDVKFGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS HVRG SM R PNSA S F + DAP L+
Sbjct: 71 GADFNPGRAGMGGSDKPDLKAEFSATPHVRGTCSMARSQSPNSANSQFFVCFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY+V+G+V +G + + +++
Sbjct: 131 QYSVWGQVIEGMDIIDQIK 149
>gi|386010963|ref|YP_005929240.1| PpiA [Pseudomonas putida BIRD-1]
gi|313497669|gb|ADR59035.1| PpiA [Pseudomonas putida BIRD-1]
Length = 185
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ T++G +E AP + + + V G YN F RV GF+ Q GG
Sbjct: 24 TPHVLLDTSFGQVEIELNAEKAPLSTKNFLEYVDSGFYNNTIFHRVIPGFMVQ----GGG 79
Query: 88 RSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGD----APH 142
+ M VQ+ + + + E S+ +++ RG LSM R S+PNSA S F I + D P
Sbjct: 80 FTDQM--VQK-DTKAPIKNEASNGLQNTRGTLSMARTSNPNSATSQFFINVADNDFLNPG 136
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
D YAVFGKVTKG E + ++ PT K+G+ +P++ + I S+ D
Sbjct: 137 RDAGYAVFGKVTKGMEVVDQIVNSPTTVKKGMRDVPSDPVYIKSAKRID 185
>gi|237653708|ref|YP_002890022.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Thauera sp.
MZ1T]
gi|237624955|gb|ACR01645.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Thauera sp.
MZ1T]
Length = 195
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 91/180 (50%), Gaps = 16/180 (8%)
Query: 16 GTASSQEDPQLGSARVV-FQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVD 74
TA+S P L + V +T+ GDI + AP++ ++ + V+ G Y+ F RV
Sbjct: 9 ATAASLAFPVLAANPTVELKTSQGDIVVEVFADKAPKSAENFVQYVKDGFYDGTVFHRVI 68
Query: 75 KGFVAQVADVVGGRSAPMNE-VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSF 133
GF+ Q GG A MN+ R E + +K+ RG L+M R SDP+SA++ F
Sbjct: 69 DGFMVQG----GGFDASMNQKATRAPIENEAK---NGLKNERGTLAMARTSDPHSASAQF 121
Query: 134 SILLG-----DAPHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
I L D P DG YAVFGKV KG E + K+ LPT G +P E I + S+
Sbjct: 122 FINLVPNTFLDYPSRDGWGYAVFGKVVKGMEVVDKIAKLPTANRGFHQNVPVEAIVVESA 181
>gi|399039355|ref|ZP_10734959.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF122]
gi|398062643|gb|EJL54413.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF122]
Length = 189
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 77/173 (44%), Gaps = 23/173 (13%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q L Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQSGDTL-----TIQLKDGPVVIQLMPDVAPKHVAQIEALAKKGAYDNV 66
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVG---------EFSDVKHVRGILS 119
F RV +GF+AQ DV G N + +A G EFS VRG +
Sbjct: 67 AFHRVIEGFMAQTGDVKFG-----NMEKGFDASLAGTGGSDMPDLPAEFSKTPFVRGTVG 121
Query: 120 MGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
M R DPNSA S F I+ D L+GQY V GKV G E + K++ R EG
Sbjct: 122 MARSQDPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK----RGEG 170
>gi|302923103|ref|XP_003053605.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734546|gb|EEU47892.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 622
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ----VADVVG 86
V T YGDI +P AP+TV++ + G YN+ F RV + F+ Q + D G
Sbjct: 473 AVIHTTYGDIHIRLFPDAAPKTVENFVTHCKSGYYNSTIFHRVIRKFMIQGGDPLGDGTG 532
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G S E + EFS +KH + + PN+ AS F I P LDG+
Sbjct: 533 GESIWGREFE---------DEFSSLKHDKPYTVSMANAGPNTNASQFFITTEKTPWLDGK 583
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
+ +FG+ T+G + + K+E + T KE P E I +
Sbjct: 584 HTIFGRATQGFDVIHKIENVRTHKE----KPEEDIKV 616
>gi|172061030|ref|YP_001808682.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
ambifaria MC40-6]
gi|171993547|gb|ACB64466.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
ambifaria MC40-6]
Length = 191
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTSQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K++ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFEEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNSGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+EG+ T G +P + + I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEGVATTSRGPMQDVPAQPVLIESA 186
>gi|29028318|gb|AAO64723.1|AF146799_1 cyclophilin [Homo sapiens]
Length = 161
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G G+
Sbjct: 3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGKR 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
+ ++ E E + + +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GNVIWGKKFEDEYSEI-----LKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 117 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 157
>gi|332557923|ref|ZP_08412245.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Rhodobacter
sphaeroides WS8N]
gi|332275635|gb|EGJ20950.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Rhodobacter
sphaeroides WS8N]
Length = 197
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G++ P VAP V+ + L R G Y+ F RV +GF+AQ DV G+ + ++R
Sbjct: 52 GEVVIDLLPDVAPAHVERMVTLAREGAYDGVVFHRVIEGFMAQTGDVEFGKG---DNLRR 108
Query: 98 VEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ + EFSDV RG++ M R DPNSA S F I+ L+GQY V G+V
Sbjct: 109 AGTGGSSYPDLPAEFSDVPFTRGVVGMARSDDPNSANSQFFIMFAPGEFLNGQYTVVGRV 168
Query: 154 TKG-DETLRKLEGLPTR 169
+G D R G P R
Sbjct: 169 VQGMDVVDRIARGEPPR 185
>gi|331083537|ref|ZP_08332648.1| hypothetical protein HMPREF0992_01572 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330403748|gb|EGG83300.1| hypothetical protein HMPREF0992_01572 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 172
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ L++ G Y+ F RV GF+ Q G G P ++
Sbjct: 20 LYPEIAPNTVNNFISLIKDGFYDGLIFHRVICGFMIQGGCPDGTGMGGPGYSIK------ 73
Query: 103 TVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
GEFS ++ H G+LSM R PNSA S F I+ +PHLDG YA FGK+T+G
Sbjct: 74 ---GEFSQNHFENNLAHTPGVLSMARAMHPNSAGSQFFIMHEASPHLDGAYAAFGKITEG 130
Query: 157 DETLRKL 163
+ + K+
Sbjct: 131 MDVVNKI 137
>gi|325677963|ref|ZP_08157605.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruminococcus
albus 8]
gi|324110517|gb|EGC04691.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ruminococcus
albus 8]
Length = 418
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Query: 49 APQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEF 108
AP + ++ KLV G Y+ F RV KGF+AQ D G + +E ++ E + G
Sbjct: 85 APISCENFEKLVSSGFYDGLTFHRVVKGFMAQGGDPEGTGAGGSDE--NIKGEFSANGVE 142
Query: 109 SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
+D+ H RG++SM R D +SA+S F I DA LDG YA FG+VT+G E + K
Sbjct: 143 NDLSHQRGVVSMARSQDNDSASSQFFICYDDASFLDGNYAAFGQVTQGMEVVDKF 197
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 17 TASSQEDPQL-GSARVVFQTNYGDIEFG-------FYPSVAPQTVDHIFKLVRLGCYNTN 68
T +S DP G R +F + + EF Y AP T ++ +LV G Y+
Sbjct: 220 TKASMMDPDADGHKRALFTVEFTEHEFKEGEFTITLYADKAPITCENFEELVSSGFYDGL 279
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGR 122
F RV F+AQ D G +EKT+ GEFS D+KH +G +SM R
Sbjct: 280 TFHRVIDDFMAQGGDPEG--------TGMGGSEKTIKGEFSSNGVENDLKHTKGTVSMAR 331
Query: 123 YSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+DP+SA+S F I LDG YA FG+VT+G
Sbjct: 332 SNDPDSASSQFFICYDTCDFLDGNYAAFGEVTEG 365
>gi|302037020|ref|YP_003797342.1| peptidylprolyl isomerase [Candidatus Nitrospira defluvii]
gi|300605084|emb|CBK41417.1| Peptidylprolyl isomerase [Candidatus Nitrospira defluvii]
Length = 169
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 20/155 (12%)
Query: 37 YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVAD--------VVGGR 88
+G+I +P VAP V + L + G YN F RV GF+ Q D G
Sbjct: 21 WGEIVLRLFPDVAPNHVKNFVDLAKKGFYNGTTFHRVIPGFMIQGGDPNSKNPDRASHGM 80
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P + V+ EF+ H RG LSM R +DP+SA S F I + DA LD QY
Sbjct: 81 GGPGHNVK---------AEFNSKPHKRGTLSMARANDPDSAGSQFFICVNDANFLDWQYT 131
Query: 149 VFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
VFG+V G + + K+ G ++++G P ER+ +
Sbjct: 132 VFGEVQSGLDVVDKVVG--SKRDGR-DNPLERVEM 163
>gi|373457176|ref|ZP_09548943.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Caldithrix
abyssi DSM 13497]
gi|371718840|gb|EHO40611.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Caldithrix
abyssi DSM 13497]
Length = 219
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVAD---- 83
AR+V TNYG+IE +P AP T + G Y+ F RV KGF+ Q D
Sbjct: 62 KARIV--TNYGNIELKLFPQKAPLTCFNFITHAESGYYDGLLFHRVIKGFMIQGGDPNTR 119
Query: 84 ----VVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSD-PNSAASSFSILLG 138
+ G P+ + EF+D+KH RG++SM R + A + F I+
Sbjct: 120 GGNVQIYGLGGPLVHIPH---------EFNDLKHDRGVVSMARPGNLAAGAGTQFFIVQQ 170
Query: 139 DAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
A HLDGQY VFGKVT G + + K+ + T + P + I +
Sbjct: 171 PAHHLDGQYTVFGKVTSGLDVVDKIADVATGANDLPKTPVKIIKL 215
>gi|302335509|ref|YP_003800716.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Olsenella uli
DSM 7084]
gi|301319349|gb|ADK67836.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Olsenella uli
DSM 7084]
Length = 241
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
++G IE + P TV + LV+ G Y+ F R+ GF+ Q D G +
Sbjct: 88 DFGTIELELNANNTPITVSNFADLVQSGFYDGLTFHRIIGGFMVQGGDPNGDGTG--GSA 145
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+R++ E + G + ++H RG++SM R +D NSA+S F I+ D+ LDG+YA FG+VT
Sbjct: 146 RRIKGEFSENGIVNAIQHKRGVISMARSNDANSASSQFFIMHADSSSLDGKYAAFGRVTS 205
Query: 156 GDETLRKL--EGLPTRKEG 172
G E + + + +PT G
Sbjct: 206 GLEVIDAICEKIVPTDSNG 224
>gi|238921461|ref|YP_002934976.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Edwardsiella ictaluri 93-146]
gi|238871030|gb|ACR70741.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Edwardsiella ictaluri 93-146]
Length = 188
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
RI +TL+TL A + RV+ T+ G+IE Y AP TVD+ V G Y
Sbjct: 4 RIVITLVTLFSLAVMAPAALAANTRVMLMTSVGNIELELYNQKAPVTVDNFLGYVNSGYY 63
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYS 124
N F RV GF+ Q G ++Q+ + + E + ++++RG ++M R +
Sbjct: 64 NGTIFHRVIPGFMIQGGGFTG-------DMQQKATQPPIKNEADNGLRNLRGTIAMARTA 116
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
+ +SA S F I + D LD GQ YAVFGKV KG + + ++ T G + +P
Sbjct: 117 EKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVIKGMDVVDRISQARTENVGPYQNVPA 176
Query: 179 ERITIHSS 186
+ I I S+
Sbjct: 177 KPIVITSA 184
>gi|171320748|ref|ZP_02909759.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
ambifaria MEX-5]
gi|171094013|gb|EDT39115.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
ambifaria MEX-5]
Length = 191
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTSQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K++ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFEEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNGGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+EG+ T G +P + + I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEGVATTSRGPMQDVPAQPVLIESA 186
>gi|134296085|ref|YP_001119820.1| peptidylprolyl isomerase [Burkholderia vietnamiensis G4]
gi|134139242|gb|ABO54985.1| Peptidylprolyl isomerase [Burkholderia vietnamiensis G4]
Length = 191
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T+ GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTSQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K++ G ++M R SDPNSA F I D P+ DG
Sbjct: 84 KTNFEEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATEQFFINTVDNSGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+EG+ T G +P + + I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEGVATTSRGPMQDVPAQPVVIESA 186
>gi|325273405|ref|ZP_08139661.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas sp. TJI-51]
gi|324101465|gb|EGB99055.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas sp. TJI-51]
Length = 185
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ T++G +E AP + + + V G YN F RV GF+ Q GG
Sbjct: 24 TPHVLLDTSFGQVEIELNAEKAPVSTKNFLQYVDSGFYNNTIFHRVIPGFMVQ----GGG 79
Query: 88 RSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGD----APH 142
+ M VQ+ + + + E S+ +++ RG LSM R S+PNSA S F I + D P
Sbjct: 80 FTEQM--VQK-DTKDPIKNEASNGLQNTRGTLSMARTSNPNSATSQFFINVADNDFLNPG 136
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
D YAVFGKVTKG E + ++ PT K+G+ +P + + I S+ D
Sbjct: 137 RDAGYAVFGKVTKGMEVVDQIVNSPTTVKKGMRDVPADPVFIKSAKRID 185
>gi|322708873|gb|EFZ00450.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Metarhizium
anisopliae ARSEF 23]
Length = 626
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ----VADVVG 86
V TNYGDI +P AP+TV++ + G YN F R+ K F+ Q + D G
Sbjct: 477 AVLHTNYGDIHIRLFPEAAPKTVENFVTHAKDGYYNNTIFHRIIKKFMIQGGDPLGDGTG 536
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G S E + EFS +KH + + PN+ S F I P LDG+
Sbjct: 537 GESIWGKEFE---------DEFSSLKHDKPFTVSMANAGPNTNGSQFFITTEKTPWLDGK 587
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
+ +FG+ T+G + ++ +E + T KE P E I I
Sbjct: 588 HTIFGRATQGFDVIQNIENVRTYKE----KPEEDIKI 620
>gi|332209740|ref|XP_003253971.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3 isoform 1
[Nomascus leucogenys]
gi|332209744|ref|XP_003253973.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3 isoform 3
[Nomascus leucogenys]
Length = 161
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GNSIWGKKFEDEYS---EY--LKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 117 VFGKVIDGLETLDELEKLPVNEKTYRPLNDIHIKDITIHAN 157
>gi|325265182|ref|ZP_08131908.1| peptidyl-prolyl cis-trans isomerase B [Clostridium sp. D5]
gi|324029586|gb|EGB90875.1| peptidyl-prolyl cis-trans isomerase B [Clostridium sp. D5]
Length = 172
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Query: 31 VVFQTNYGDI-EFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GR 88
V F+ GDI + YP +AP TV + LV+ G Y+ F RV GF+ Q G G
Sbjct: 6 VTFEMENGDIMKAQLYPDIAPNTVKNFVSLVKKGFYDGLTFHRVISGFMIQGGCPDGTGM 65
Query: 89 SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
P ++ E T G +D+ H G+LSM R + P+SA S F I+ +P LDG YA
Sbjct: 66 GGPG---YTIKGEFTQNGFRNDLPHGVGVLSMARANHPDSAGSQFFIMHKKSPFLDGAYA 122
Query: 149 VFGKVTKGDETLRKL 163
FG++T+G + + K+
Sbjct: 123 AFGEITEGMDIVNKI 137
>gi|374851275|dbj|BAL54240.1| peptidyl-prolyl cis-trans isomerase [uncultured candidate division
OP1 bacterium]
gi|374857417|dbj|BAL60270.1| peptidyl-prolyl cis-trans isomerase [uncultured candidate division
OP1 bacterium]
Length = 157
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 32 VFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSA 90
+ +T+ G + + AP TV + LV+ G Y F RV G V Q D G GR
Sbjct: 8 IVETSMGTFKIELFADKAPNTVQNFIDLVKRGFYKDMIFHRVVAGVVIQTGDPTGTGRGG 67
Query: 91 PMNEVQRVEAEKTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
+EKT+ E D+KH GI+ M R DP+SA S F I L P LDGQYA
Sbjct: 68 ---------SEKTIKLEIHPDLKHDSAGIVGMARTPDPDSATSQFYITLAPTPQLDGQYA 118
Query: 149 VFGKVTKG 156
VFGKV +G
Sbjct: 119 VFGKVIEG 126
>gi|78066855|ref|YP_369624.1| peptidyl-prolyl isomerase [Burkholderia sp. 383]
gi|77967600|gb|ABB08980.1| Peptidylprolyl isomerase [Burkholderia sp. 383]
Length = 193
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T+ GDI YP AP++V + V+ G YN F RV KGF+ Q G
Sbjct: 32 VQLKTSQGDIRVELYPEKAPKSVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 85
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K++ G ++M R SDPNSA + F I D P+ DG
Sbjct: 86 KTNFEEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNSGLDYPNPDG 145
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+EG+ T G +P + I I S+
Sbjct: 146 NGYAVFGKVVSGLDVVKKIEGVATTSRGPMQDVPAQPIVIESA 188
>gi|398397557|ref|XP_003852236.1| hypothetical protein MYCGRDRAFT_72265 [Zymoseptoria tritici IPO323]
gi|339472117|gb|EGP87212.1| hypothetical protein MYCGRDRAFT_72265 [Zymoseptoria tritici IPO323]
Length = 187
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 18 ASSQEDPQLGSAR-VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
AS DP SA+ V+ T GDI Y P+T + L G Y+ F R+ KG
Sbjct: 24 ASGGADPN--SAQGVILHTTLGDITISLYGKETPRTCKNFATLASTGKYDNVIFHRIIKG 81
Query: 77 FVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHV-RGILSMGRYSDPNSAASSFS 134
F+ Q D G GR ++ E E S +KH +G LSM + PN+ S F
Sbjct: 82 FMIQGGDPTGTGRGGSSIYGEKFEDE-----FVSGLKHTGKGTLSMAN-AGPNTNGSQFF 135
Query: 135 ILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPT 168
I LG PHLDG++ VFGKVT+G + + KL + T
Sbjct: 136 ITLGPTPHLDGKHTVFGKVTEGMDVVDKLGAVAT 169
>gi|119897348|ref|YP_932561.1| peptidyl-prolyl cis-trans isomerase A [Azoarcus sp. BH72]
gi|119669761|emb|CAL93674.1| probable peptidyl-prolyl cis-trans isomerase A [Azoarcus sp. BH72]
Length = 193
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 93/187 (49%), Gaps = 21/187 (11%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
FL L T +G A++ +PQ V+F TN G++ YP AP+TV + + V+ Y+
Sbjct: 7 FLALSTWLGLAAA-ANPQ-----VLFTTNQGELVVELYPEKAPKTVANFLQYVKDKHYDG 60
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMNEVQ-RVEAEKTVVGEFSDVKHVRGILSMGRYSDP 126
F RV GF+ Q GG A M E R E + +++ G L+M R DP
Sbjct: 61 TIFHRVINGFMIQ----GGGMDAAMKEKSTRAPIENEAK---NGLRNEPGTLAMARTGDP 113
Query: 127 NSAASSFSILLG-----DAPHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTE 179
+SA + F I + D P DG YAVFGKV +G + + + +PTR G +P E
Sbjct: 114 HSATAQFFINVAPNSFLDYPSRDGWGYAVFGKVVRGLDVVDTIARVPTRNVGFHQNVPAE 173
Query: 180 RITIHSS 186
+ I S+
Sbjct: 174 PVVIQSA 180
>gi|225181203|ref|ZP_03734649.1| Peptidylprolyl isomerase [Dethiobacter alkaliphilus AHT 1]
gi|225168172|gb|EEG76977.1| Peptidylprolyl isomerase [Dethiobacter alkaliphilus AHT 1]
Length = 174
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTV 104
P AP TV + LV+ G Y+ F RV GF+ Q G G P ++ E
Sbjct: 22 PQAAPNTVKNFVSLVKSGFYDGLIFHRVIPGFMIQGGCPQGSGMGGPG---YTIKGEFKA 78
Query: 105 VGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
G + ++H RG+LSM R + P+SA S F +++ APHLDGQYA FGKVT G
Sbjct: 79 NGFDNPIRHDRGVLSMARAAHPDSAGSQFFLMVAGAPHLDGQYAAFGKVTDG 130
>gi|358012782|ref|ZP_09144592.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. P8-3-8]
Length = 188
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
M+ I + L L+ ++ A + D Q+ +TN G+I+ Y AP TV + V
Sbjct: 1 MIKKIGLSLALVVIVNQAFANTDMQI-------KTNLGNIKIELYDDKAPVTVKNFKSYV 53
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILS 119
YN F RV GF+ Q GG + M E + +V E S+ +K+ RG L+
Sbjct: 54 NSQFYNGTIFHRVIPGFMIQ----GGGFDSKMTE---KATQPPIVNEASNGLKNTRGTLA 106
Query: 120 MGRYSDPNSAASSFSILLGDAPHLDGQ-----YAVFGKVTKGDETLRKLEGLPTRKEGIF 174
M R +DPNSA+S F I + + L+ YAVFGKVT+G + + K+ PT G++
Sbjct: 107 MARTNDPNSASSQFFINVANNDFLNKAAGNPGYAVFGKVTEGLDIVDKIVNTPTGTVGMY 166
Query: 175 V-MPTERITIHSSYYYDTEME 194
+P + + I S +T+ +
Sbjct: 167 QDVPKQAVKIISIQTINTKAK 187
>gi|149916361|ref|ZP_01904881.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Roseobacter
sp. AzwK-3b]
gi|149809815|gb|EDM69667.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Roseobacter
sp. AzwK-3b]
Length = 182
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGR--SAPMNEV 95
G + + VAP V+ I L G Y+ F RV +GF+AQ DV G+ MN
Sbjct: 30 GTVTIDLFEDVAPGHVEQITALAEAGAYDGVVFHRVIEGFMAQTGDVQFGKLEGGDMNRA 89
Query: 96 QRVEAEK-TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
+E+ + EFSDV RG++ M R P+SA S F I+ A HL+GQY V G+VT
Sbjct: 90 GMGGSERPDLKAEFSDVAFERGVVGMARSQSPDSANSQFFIMFAPATHLNGQYTVVGEVT 149
Query: 155 KGDETLRKLEGLPTRKEGIFVMP 177
G + + ++ R + P
Sbjct: 150 GGMDVVDAIKRGKGRNGAVIGQP 172
>gi|28316722|ref|NP_783638.1| peptidyl-prolyl cis-trans isomerase-like 3 [Rattus norvegicus]
gi|354489862|ref|XP_003507079.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like
[Cricetulus griseus]
gi|73921768|sp|Q812D3.1|PPIL3_RAT RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 3;
Short=PPIase; AltName: Full=CYP10L; AltName:
Full=Cyclophilin-like protein PPIL3; AltName:
Full=Rotamase PPIL3
gi|28190010|gb|AAO32943.1|AF315802_1 CYP10L [Rattus norvegicus]
gi|56388565|gb|AAH87645.1| Peptidylprolyl isomerase (cyclophilin)-like 3 [Rattus norvegicus]
gi|149046099|gb|EDL98992.1| peptidylprolyl isomerase (cyclophilin)-like 3, isoform CRA_b
[Rattus norvegicus]
gi|149046101|gb|EDL98994.1| peptidylprolyl isomerase (cyclophilin)-like 3, isoform CRA_b
[Rattus norvegicus]
Length = 161
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GSSIWGKKFEDEYS---EY--LKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 117 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 157
>gi|432872473|ref|XP_004072106.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like isoform
2 [Oryzias latipes]
Length = 169
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V F T+ GD++ + P+ ++ L G YN F R KGF+ Q D G G+
Sbjct: 11 VTFHTDLGDLKIELFCERTPKACENFLALCASGFYNGCVFHRNIKGFMVQTGDPTGTGKG 70
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
++ E E FS+ +KH VRG++SM S PN+ S F PHLD +Y
Sbjct: 71 GTSIWGRKFEDE------FSEHLKHNVRGVVSMAN-SGPNTNGSQFFFTYAKQPHLDMKY 123
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSSYY 188
+FGK+ G ETL +LE LP ++ + RI TIH++ +
Sbjct: 124 TIFGKIIDGLETLDELEKLPVNEKTFRPITDTRIKDVTIHANPF 167
>gi|348672499|gb|EGZ12319.1| hypothetical protein PHYSODRAFT_355199 [Phytophthora sojae]
Length = 166
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
VVF+T GD Y AP+T +I +L R G YN F R+ K F+ Q D G GR
Sbjct: 13 VVFETTVGDFTMELYTEHAPRTCWNIAELARRGYYNNTIFHRIIKDFMIQAGDPTGTGRG 72
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHV-RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
+ + E T ++KH G+LSM S PN+ S F I L P LDG++
Sbjct: 73 GESIYGAKFDDEIT-----KELKHTGAGVLSMAN-SGPNTNGSQFFITLAPTPWLDGKHT 126
Query: 149 VFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSY 187
VFG+++ G + ++++ +PT G P E I + +Y
Sbjct: 127 VFGRISSGMKVIQRMGMVPT---GANDRPREEIHVKRAY 162
>gi|339018221|ref|ZP_08644361.1| peptidyl-prolyl cis-trans isomerase [Acetobacter tropicalis NBRC
101654]
gi|338752690|dbj|GAA07665.1| peptidyl-prolyl cis-trans isomerase [Acetobacter tropicalis NBRC
101654]
Length = 164
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV 105
P +AP + I L G Y+ F RV +GF+AQ D P +
Sbjct: 26 PDIAPLAAERIRTLSAEGFYDNVPFHRVIEGFMAQAGD-------PTGTGTGGSPLPDLK 78
Query: 106 GEFS-DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
EF+ D K +RG L M R SDPNSA S F I+ +PHLDGQY + G V +G E + K++
Sbjct: 79 AEFTRDAKFLRGTLGMARTSDPNSANSQFFIMFEPSPHLDGQYTIVGDVIEGMENIDKIK 138
>gi|113867239|ref|YP_725728.1| peptidyl-prolyl cis-trans isomerase [Ralstonia eutropha H16]
gi|113526015|emb|CAJ92360.1| Peptidyl-prolyl cis-trans isomerase,cyclophilinfamily [Ralstonia
eutropha H16]
Length = 193
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 25/175 (14%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
Q + RV F T+ G YP AP+TV + + V+ G Y+ F RV GF+ Q
Sbjct: 27 QQAAERVQFVTSAGKFTVELYPEAAPRTVANFLEYVKSGFYSGTIFHRVINGFMVQ---- 82
Query: 85 VGG------RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLG 138
GG + P +EA +K+ G ++M R SDPNSA + F + +
Sbjct: 83 -GGGFDRDMKEKPTRAPIPLEAR-------GGLKNKAGTVAMARTSDPNSATAQFFVNVV 134
Query: 139 DAPHLD------GQYAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
D P+LD YAVFGKV +G ET+ K++ +PT G + +P I I S+
Sbjct: 135 DNPNLDYPQPDGNGYAVFGKVVEGMETIDKIKSVPTTAYGPMRNVPAAPIVIESA 189
>gi|87198988|ref|YP_496245.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Novosphingobium aromaticivorans DSM 12444]
gi|87134669|gb|ABD25411.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Novosphingobium aromaticivorans DSM 12444]
Length = 151
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
+ ++V + GD+ P +AP V+ I +L G Y+ F RV GF+AQ
Sbjct: 1 MADEKLVLSLDSGDVVIKLRPDLAPGHVERIKELANEGFYDGVKFHRVIPGFMAQ----- 55
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
GG P ++ + EF+D HVRG+ SM R S P+SA S F I DA LD
Sbjct: 56 GG--CPQGTGMGGSSKPDLKAEFNDEPHVRGVCSMARTSYPHSANSQFFICFDDARFLDK 113
Query: 146 QYAVFGKVTKGDETLRKL-EGLPTRKEGI 173
QY V+G+V G E + L +G P G+
Sbjct: 114 QYTVWGQVESGMEHIDALPKGEPPANPGV 142
>gi|14043400|gb|AAH07693.1| Peptidylprolyl isomerase (cyclophilin)-like 3 [Homo sapiens]
gi|60656175|gb|AAX32651.1| peptidylprolyl isomerase-like 3 [synthetic construct]
gi|325464347|gb|ADZ15944.1| peptidylprolyl isomerase (cyclophilin)-like 3 [synthetic construct]
Length = 161
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 62
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
N + + E E+S+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 G--NSIWGKKFED----EYSEYLKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKY 115
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 116 TVFGKVIDGLETLDELEKLPVNEKTYRPLNEVHIKDITIHAN 157
>gi|209735960|gb|ACI68849.1| Peptidyl-prolyl cis-trans isomerase-like 3 [Salmo salar]
Length = 161
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GD++ + AP++ ++ L G YN F R KGF+ Q D G G+
Sbjct: 3 VTLHTDLGDLKIELFCERAPKSCENFLALCAGGFYNGCIFHRNIKGFMVQTGDPTGTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + +KH VRG++SM + PN+ AS F PHLD +Y
Sbjct: 63 GTSIWGRKFEDELS-----EHLKHNVRGVVSMAN-NGPNTNASQFFFTYAKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSSYY 188
VFGK+ G ETL +LE LP ++ + RI T+H++ +
Sbjct: 117 VFGKIIDGLETLDELEKLPVNEKSFRPLTETRIKDVTLHANPF 159
>gi|307947102|ref|ZP_07662437.1| peptidyl-prolyl cis-trans isomerase [Roseibium sp. TrichSKD4]
gi|307770766|gb|EFO29992.1| peptidyl-prolyl cis-trans isomerase [Roseibium sp. TrichSKD4]
Length = 157
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ
Sbjct: 11 LLMETTQGSVVIEMRPDLAPNHVGRIKELVREGFYDGIVFHRVIDGFMAQTG-------C 63
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + K + EF+ H RG+ SM R DPNS S F I GDA LDGQY +
Sbjct: 64 P-QGTGTGGSGKKLRAEFNKESHQRGVCSMARAMDPNSGDSQFFICFGDASFLDGQYTAW 122
Query: 151 GKVTKGDETLRKLE 164
GKV +G E + K++
Sbjct: 123 GKVLEGMENVDKIK 136
>gi|383873131|ref|NP_001244690.1| peptidyl-prolyl cis-trans isomerase-like 3 [Macaca mulatta]
gi|402889043|ref|XP_003907841.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3 [Papio
anubis]
gi|380786473|gb|AFE65112.1| peptidyl-prolyl cis-trans isomerase-like 3 isoform PPIL3b [Macaca
mulatta]
gi|383414723|gb|AFH30575.1| peptidyl-prolyl cis-trans isomerase-like 3 isoform PPIL3b [Macaca
mulatta]
gi|384947744|gb|AFI37477.1| peptidyl-prolyl cis-trans isomerase-like 3 isoform PPIL3b [Macaca
mulatta]
Length = 161
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GSSIWGKKFEDEYS---EY--LKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 117 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 157
>gi|295676875|ref|YP_003605399.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
sp. CCGE1002]
gi|295436718|gb|ADG15888.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
sp. CCGE1002]
Length = 193
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q Q V+ +T+ GDI YP AP+TV + V+ G Y+ F RV GF
Sbjct: 19 AFAQSGSQAAHPSVLLKTSEGDIRVDLYPEKAPKTVANFLDYVKAGQYSGTIFHRVIPGF 78
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q GG + E + + + +K+ G ++M R SDPNSA + F I
Sbjct: 79 MIQ----GGGYTQSFAE--KPTRAPIPLESRNGLKNTAGTIAMARTSDPNSATAQFFINT 132
Query: 138 GDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
D P+ DG YAVFGKVT G + ++++E PT G +P + + I S+
Sbjct: 133 VDNANLDYPNPDGNGYAVFGKVTSGMDVVKRIEATPTTTRGPMSDVPQKPVVIQSA 188
>gi|254500955|ref|ZP_05113106.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Labrenzia alexandrii DFL-11]
gi|222437026|gb|EEE43705.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Labrenzia alexandrii DFL-11]
Length = 156
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ T G++ P +AP V I +LVR G Y+ F RV +GF+AQ
Sbjct: 11 LIMDTTQGEVVIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIEGFMAQTG-------C 63
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P N + + EF+ HVRG+ SM R DPNS S F I DA LD QY +
Sbjct: 64 P-NGTGTGGSGTKLKAEFNAEPHVRGVCSMARAQDPNSGDSQFFICFDDATFLDRQYTAW 122
Query: 151 GKVTKGDETLRKLE-GLPTRK 170
GKV +G E + K++ G P +
Sbjct: 123 GKVIEGMENVDKIKRGEPVQN 143
>gi|395732642|ref|XP_002812773.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3 isoform 1
[Pongo abelii]
Length = 309
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 13/164 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 151 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 210
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
N + + E E+S+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 211 G--NSIWGKKFED----EYSEYLKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKY 263
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSSYY 188
VFGKV G ETL +LE LP ++ + + + ITIH++ +
Sbjct: 264 TVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF 307
>gi|344243344|gb|EGV99447.1| Peptidyl-prolyl cis-trans isomerase-like 3 [Cricetulus griseus]
Length = 160
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 2 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTGDPTGTGRG 61
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 62 GSSIWGKKFEDEYS---EY--LKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 115
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 116 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 156
>gi|194334903|ref|YP_002016763.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Prosthecochloris aestuarii DSM 271]
gi|194312721|gb|ACF47116.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Prosthecochloris aestuarii DSM 271]
Length = 190
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 4 VIRIFLTLITL-----IGTASSQEDPQLGSARVVFQTNYGDIEFG-----FYPSVAPQTV 53
++ +F LI L +G S+ DP+ T Y DI G P AP V
Sbjct: 9 LVILFSLLIALGPGTGLGATSTSADPE--------NTIYLDIPAGRVVIELLPEKAPNHV 60
Query: 54 DHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKH 113
I +L R G Y+ F RV GF+AQ D +T+ EFS H
Sbjct: 61 ARIKELTRQGFYDELAFHRVIPGFMAQTGDP--------RGNGTGGTGQTLKAEFSSEPH 112
Query: 114 VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGI 173
+RG +SM R DP+SA S F I L A LDG+Y V+GKV G E + +++ G
Sbjct: 113 IRGTVSMARADDPDSADSQFFICLAPARFLDGRYTVWGKVVSGMEFVDRIKTGTKANNGT 172
Query: 174 FVMPT 178
PT
Sbjct: 173 VANPT 177
>gi|395447860|ref|YP_006388113.1| PpiA [Pseudomonas putida ND6]
gi|397693627|ref|YP_006531507.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas putida DOT-T1E]
gi|421524025|ref|ZP_15970652.1| PpiA [Pseudomonas putida LS46]
gi|388561857|gb|AFK70998.1| PpiA [Pseudomonas putida ND6]
gi|397330357|gb|AFO46716.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas putida DOT-T1E]
gi|402752270|gb|EJX12777.1| PpiA [Pseudomonas putida LS46]
Length = 185
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ T++G +E AP + + + V G YN F RV GF+ Q GG
Sbjct: 24 TPHVLLDTSFGQVEIELNAEKAPLSTKNFLEYVDSGFYNNTIFHRVIPGFMVQ----GGG 79
Query: 88 RSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGD----APH 142
+ M VQ+ + + + E S+ +++ RG LSM R S+PNSA S F I + D P
Sbjct: 80 FTDQM--VQK-DTKAPIKNEASNGLQNTRGTLSMARTSNPNSATSQFFINVADNDFLNPG 136
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
D YAVFGKVTKG E + ++ PT K+G+ +P + + I S+ D
Sbjct: 137 RDAGYAVFGKVTKGMEVVDQIVNSPTTIKKGMRDVPADPVYIKSAKRID 185
>gi|348555177|ref|XP_003463400.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like [Cavia
porcellus]
Length = 168
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 10 VTLHTDVGDIKIEVFCERTPKTCENFLALCASSYYNGCVFHRNIKGFMVQTGDPTGTGRG 69
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 70 GNSIWGRKFEDEYS-----EHLKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 123
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 124 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 164
>gi|432872471|ref|XP_004072105.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like isoform
1 [Oryzias latipes]
Length = 161
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V F T+ GD++ + P+ ++ L G YN F R KGF+ Q D G G+
Sbjct: 3 VTFHTDLGDLKIELFCERTPKACENFLALCASGFYNGCVFHRNIKGFMVQTGDPTGTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
++ E E FS+ +KH VRG++SM S PN+ S F PHLD +Y
Sbjct: 63 GTSIWGRKFEDE------FSEHLKHNVRGVVSMAN-SGPNTNGSQFFFTYAKQPHLDMKY 115
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSSYY 188
+FGK+ G ETL +LE LP ++ + RI TIH++ +
Sbjct: 116 TIFGKIIDGLETLDELEKLPVNEKTFRPITDTRIKDVTIHANPF 159
>gi|337741027|ref|YP_004632755.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Oligotropha
carboxidovorans OM5]
gi|386030044|ref|YP_005950819.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Oligotropha
carboxidovorans OM4]
gi|336095112|gb|AEI02938.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oligotropha
carboxidovorans OM4]
gi|336098691|gb|AEI06514.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oligotropha
carboxidovorans OM5]
Length = 180
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 16/139 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV----- 85
+V T G + +AP + I +L R G YN F RV GF+AQ D
Sbjct: 32 IVIDTTKGRVVVQLRTDLAPHHAERIKQLAREGYYNNVPFHRVIDGFMAQTGDGANFNGT 91
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
GG P + EFS+V + RG++ M R ++P+SA S F I+ D P L+G
Sbjct: 92 GGSKYP-----------NLKAEFSNVPYTRGVVGMARSANPDSANSQFFIMYNDYPSLNG 140
Query: 146 QYAVFGKVTKGDETLRKLE 164
+Y V G+V G E + KL+
Sbjct: 141 KYTVIGQVVSGMENVDKLK 159
>gi|347527014|ref|YP_004833761.1| peptidyl-prolyl cis-trans isomerase [Sphingobium sp. SYK-6]
gi|345135695|dbj|BAK65304.1| peptidyl-prolyl cis-trans isomerase [Sphingobium sp. SYK-6]
Length = 149
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+ GD+ P +AP V+ I L + G Y+ F RV GF+AQ D G +E+
Sbjct: 11 DTGDVVIQLRPDLAPGHVERITTLAKEGFYDGVVFHRVIPGFMAQGGDPTG-TGMGGSEM 69
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
++AE F+ HVRG+ SM R S+PNSA S F I DA LD QY V+G VT+
Sbjct: 70 PDLKAE------FNTEPHVRGVCSMARASNPNSANSQFFICFDDATFLDRQYTVWGVVTE 123
Query: 156 GDETLRKL-EGLPTRKEGIFVMPT 178
G E + L +G P + G + T
Sbjct: 124 GMEHVDALPKGEPPAQPGKIIKAT 147
>gi|336432201|ref|ZP_08612040.1| hypothetical protein HMPREF0991_01159 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019360|gb|EGN49086.1| hypothetical protein HMPREF0991_01159 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 208
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG I AP TV + L + G Y+ F R+ GF+ Q D G +
Sbjct: 55 DYGTITVELDADTAPITVTNFVNLAKDGFYDNLTFHRIMDGFMIQGGDPNGDGTGG---- 110
Query: 96 QRVEAEKTVVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
A++T+ GEFS ++ H RG +SM R DP SA+S F I+ D+ +LDG YA
Sbjct: 111 ----ADQTIKGEFSSNGVENEISHTRGTISMARAQDPGSASSQFFIVQEDSDYLDGNYAA 166
Query: 150 FGKVTKGDETLRKL 163
FG VT G E + ++
Sbjct: 167 FGHVTSGMEIVDQI 180
>gi|355565084|gb|EHH21573.1| hypothetical protein EGK_04675, partial [Macaca mulatta]
Length = 180
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 22 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 81
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 82 GSSIWGKKFEDEYS---EY--LKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 135
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 136 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 176
>gi|414166756|ref|ZP_11422988.1| hypothetical protein HMPREF9696_00843 [Afipia clevelandensis ATCC
49720]
gi|410892600|gb|EKS40392.1| hypothetical protein HMPREF9696_00843 [Afipia clevelandensis ATCC
49720]
Length = 180
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 4 VIRIFLTLITLI--GTASSQEDPQ-LGSAR-VVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+IRI L + A SQ P L A +V T G + P +AP+ + I +L
Sbjct: 1 MIRILAVLAAFVFATPAFSQALPAGLDKANAIVIDTTKGRVIVKLRPDLAPKHAERIKQL 60
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADV-----VGGRSAPMNEVQRVEAEKTVVGEFSDVKHV 114
R G YN F RV +GF+AQ D GG P + EFS+V
Sbjct: 61 ARDGYYNNVPFHRVIEGFMAQTGDGQRFNGTGGSKYP-----------NLPAEFSNVPFK 109
Query: 115 RGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
RGI+ M R DPNSA S F I+ D L+G+Y V G+V G + + K++
Sbjct: 110 RGIVGMARAGDPNSANSQFFIMFADGSFLNGKYTVVGEVVSGMDVVDKIK 159
>gi|355750741|gb|EHH55068.1| hypothetical protein EGM_04199, partial [Macaca fascicularis]
Length = 180
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 22 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 81
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 82 GSSIWGKKFEDEYS---EY--LKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 135
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 136 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 176
>gi|407973227|ref|ZP_11154139.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor indicus C115]
gi|407431068|gb|EKF43740.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor indicus C115]
Length = 158
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VG 86
++ +T G + +P VAP V I +L R Y+ F RV F+AQ D +G
Sbjct: 11 IIMETTKGKVVIQLFPDVAPGHVSRIKELARENFYDGIVFHRVIDDFMAQTGDPTGTGMG 70
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EFS++ H RG SM R +PNSA S F I +P LD Q
Sbjct: 71 GSDKP-----------DLKAEFSNMSHERGTCSMARSQNPNSANSQFFICFAKSPWLDRQ 119
Query: 147 YAVFGKVTKGDETLRKLE 164
Y+V+G+V +G + + K++
Sbjct: 120 YSVWGQVIEGMDNVDKIK 137
>gi|251823905|ref|NP_001156521.1| peptidyl-prolyl cis-trans isomerase-like 3 [Ovis aries]
gi|330864747|ref|NP_001193493.1| peptidyl-prolyl cis-trans isomerase-like 3 [Bos taurus]
gi|238815021|gb|ACR56707.1| peptidylprolyl isomerase (cyclophilin)-like 3 [Ovis aries]
Length = 161
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GNSIWGKKFEDEYS---EY--LKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 117 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 157
>gi|408379625|ref|ZP_11177218.1| peptidyl prolyl cis-trans isomerase [Agrobacterium albertimagni
AOL15]
gi|407746436|gb|EKF57959.1| peptidyl prolyl cis-trans isomerase [Agrobacterium albertimagni
AOL15]
Length = 189
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
++ + FL + G+A +Q + + Q G + P VAP+ V I +L
Sbjct: 3 LVQLATAFLLAVAGFGSAQAQSNEDF----LTIQLKDGPVVIQLMPDVAPKHVAQIKELA 58
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRG 116
G Y+ F RV +GF+AQ DV G E R + + EFS V RG
Sbjct: 59 SKGEYDNVAFHRVIEGFMAQTGDVQFGDMENGFEPGRAGTGGSSLPDIEAEFSSVPFERG 118
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
+ M R DPNSA S F I+ + L+GQY V GKV G E + K++ R EG
Sbjct: 119 TVGMARSQDPNSANSQFFIMFAEGGFLNGQYTVVGKVVAGMEYVDKIK----RGEG 170
>gi|19557636|ref|NP_570981.1| peptidyl-prolyl cis-trans isomerase-like 3 isoform PPIL3b [Homo
sapiens]
gi|74005127|ref|XP_849186.1| PREDICTED: peptidylprolyl isomerase (cyclophilin)-like 3 isoform 2
[Canis lupus familiaris]
gi|194043748|ref|XP_001926016.1| PREDICTED: peptidylprolyl isomerase-like protein 3 isoform 2 [Sus
scrofa]
gi|194043750|ref|XP_001925960.1| PREDICTED: peptidylprolyl isomerase-like protein 3 isoform 1 [Sus
scrofa]
gi|332815108|ref|XP_516021.3| PREDICTED: peptidylprolyl isomerase (cyclophilin)-like 3 isoform 5
[Pan troglodytes]
gi|332815110|ref|XP_003309441.1| PREDICTED: peptidylprolyl isomerase (cyclophilin)-like 3 isoform 1
[Pan troglodytes]
gi|338715893|ref|XP_001503662.3| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like [Equus
caballus]
gi|397500142|ref|XP_003820785.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3 [Pan
paniscus]
gi|410969152|ref|XP_003991060.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3 [Felis catus]
gi|426338185|ref|XP_004033068.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3 isoform 1
[Gorilla gorilla gorilla]
gi|426338187|ref|XP_004033069.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3 isoform 2
[Gorilla gorilla gorilla]
gi|73921766|sp|Q9H2H8.1|PPIL3_HUMAN RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 3;
Short=PPIase; AltName: Full=Cyclophilin J; Short=CyPJ;
AltName: Full=Cyclophilin-like protein PPIL3; AltName:
Full=Rotamase PPIL3
gi|62738560|pdb|1XYH|A Chain A, Crystal Structure Of Recombinant Human Cyclophilin J
gi|166007048|pdb|2OK3|A Chain A, X-Ray Structure Of Human Cyclophilin J At 2.0 Angstrom
gi|12006167|gb|AAG44766.1|AF271652_1 cyclophilin-like protein PPIL3b [Homo sapiens]
gi|119590626|gb|EAW70220.1| peptidylprolyl isomerase (cyclophilin)-like 3, isoform CRA_a [Homo
sapiens]
gi|119590628|gb|EAW70222.1| peptidylprolyl isomerase (cyclophilin)-like 3, isoform CRA_a [Homo
sapiens]
gi|335772486|gb|AEH58082.1| peptidyl-prolyl cis-trans isomerase-like-like protein [Equus
caballus]
gi|410211864|gb|JAA03151.1| peptidylprolyl isomerase (cyclophilin)-like 3 [Pan troglodytes]
gi|410263424|gb|JAA19678.1| peptidylprolyl isomerase (cyclophilin)-like 3 [Pan troglodytes]
gi|410291606|gb|JAA24403.1| peptidylprolyl isomerase (cyclophilin)-like 3 [Pan troglodytes]
gi|410328439|gb|JAA33166.1| peptidylprolyl isomerase (cyclophilin)-like 3 [Pan troglodytes]
Length = 161
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GNSIWGKKFEDEYS---EY--LKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 117 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 157
>gi|67527042|gb|AAY68311.1| putative peptidyl prolyl cis-trans isomerase [uncultured marine
bacterium 66A03]
Length = 169
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
+ ++ +F + IG ++ D L ++ +T G+IE P +AP V I +L +
Sbjct: 1 MRLLFLFFIITGFIGM-QTRADTDL---KLTLETTAGNIEISLLPELAPNHVARISELAK 56
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMG 121
G Y+ F RV GF+AQ D G Q+++AE FSD + G + M
Sbjct: 57 TGFYDGIIFHRVIPGFMAQTGDPDGNGMG--GSGQKLKAE------FSDYSYREGTVGMA 108
Query: 122 RYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
R S+P+SA S F I HL GQY V+G+V+ G + + K+
Sbjct: 109 RTSNPDSADSQFFICYDGCSHLTGQYTVWGQVSDGMDNVYKI 150
>gi|162447607|ref|YP_001620739.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Acholeplasma
laidlawii PG-8A]
gi|161985714|gb|ABX81363.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Acholeplasma
laidlawii PG-8A]
Length = 217
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+YG I + VAP TV++ + ++ + F R+ K F+ Q +V P
Sbjct: 60 DYGIITAQLFHDVAPNTVNNFIDYILDDQFSDSSFHRIIKDFMVQ-GGMVKDSKLP---- 114
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+ E T G +++KH G+LSM R SD NSA S F ++ +PHLDG YA FG +
Sbjct: 115 --IRGEFTSNGFLNNLKHTYGVLSMARTSDKNSATSQFFMMTSTSPHLDGAYASFGGIIS 172
Query: 156 GDETLRKLEGLPTRKEGIFVMPTERITIHS 185
G L ++E L T P ++ I S
Sbjct: 173 GFTILNQIESLSTNSND---APLTKVVIES 199
>gi|440893176|gb|ELR46044.1| Peptidyl-prolyl cis-trans isomerase-like 3, partial [Bos grunniens
mutus]
Length = 160
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 2 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 61
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 62 GNSIWGKKFEDEYS---EY--LKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 115
Query: 149 VFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 116 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 156
>gi|402566134|ref|YP_006615479.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
cepacia GG4]
gi|402247331|gb|AFQ47785.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
cepacia GG4]
Length = 191
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 85/171 (49%), Gaps = 15/171 (8%)
Query: 25 QLGSARVVFQ--TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
Q SA V Q T+ GDI YP AP++V + V+ G YN F RV KGF+ Q
Sbjct: 22 QTASAHPVVQLKTSQGDIRVELYPEKAPKSVANFLDYVKSGQYNGTIFHRVIKGFMIQ-- 79
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-- 140
G N ++ + + +K++ G ++M R SDPNSA + F I D
Sbjct: 80 ----GGGYKTNFEEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNSG 135
Query: 141 ---PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
P+ DG YAVFGKV G + ++K+EG+ T G +P + + I S+
Sbjct: 136 LDYPNPDGNGYAVFGKVVSGLDVVKKIEGVATTSRGPMQDVPAQPVLIESA 186
>gi|407474068|ref|YP_006788468.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin-type
[Clostridium acidurici 9a]
gi|407050576|gb|AFS78621.1| peptidyl-prolyl cis-trans isomerase B, cyclophilin-type
[Clostridium acidurici 9a]
Length = 173
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N I+ YP +AP TV + L+ G Y+ F RV GF+ Q G G P
Sbjct: 13 NGNKIKAELYPEIAPNTVKNFISLINKGFYDGLIFHRVIPGFMIQGGCSEGNGTGGPGYS 72
Query: 95 VQRVEAEKTVVGEFSD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ GEFSD +KH +G+LSM R P+SA S F I+ +PHLD QYA
Sbjct: 73 IK---------GEFSDNGFKNDLKHEKGVLSMARTMIPDSAGSQFFIMTETSPHLDRQYA 123
Query: 149 VFGKVTKGDETLRKL 163
FGKV +G E + ++
Sbjct: 124 AFGKVIEGIEEVDRI 138
>gi|23098815|ref|NP_692281.1| peptidyl-prolyl cis-trans isomerase B [Oceanobacillus iheyensis
HTE831]
gi|22777042|dbj|BAC13316.1| peptidyl-prolyl cis-trans isomerase B (ppiase B) (rotamase B)
[Oceanobacillus iheyensis HTE831]
Length = 202
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV + L+ G Y+ F R+ FV Q D G G P + E
Sbjct: 53 LYPEIAPNTVTNFISLIEDGFYDGLTFHRIVPEFVIQGGDPEGNGTGGPG---YSIPGEF 109
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
T G +D+ H RG+LSM R P+SA S F I+L A HLD YA FGKV +G ET+
Sbjct: 110 TSNGFENDLIHERGVLSMARSQHPDSAGSQFFIVLDKADHLDKDYAGFGKVIEGMETVDN 169
Query: 163 L 163
+
Sbjct: 170 I 170
>gi|255261201|ref|ZP_05340543.1| peptidyl prolyl cis-trans isomerase A signal peptide protein
[Thalassiobium sp. R2A62]
gi|255103536|gb|EET46210.1| peptidyl prolyl cis-trans isomerase A signal peptide protein
[Thalassiobium sp. R2A62]
Length = 168
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G + P VAP+ V+ + +L R G Y+ F RV GF+AQ DV G
Sbjct: 11 ILMELKDGTVTIELLPDVAPKHVERMKELARSGAYDNVAFHRVIDGFMAQTGDVANGN-- 68
Query: 91 PMNEVQRVEAEKT-------VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
M + T + EFS V H RG L R +P+SA S F I GD L
Sbjct: 69 -MENDFNIRMAGTGGSDMADLPAEFSKVPHARGSLGAARSQNPDSANSQFFINFGDNNFL 127
Query: 144 DGQYAVFGKVTKGDE 158
+GQY V+G+VT G E
Sbjct: 128 NGQYTVYGQVTSGME 142
>gi|268678747|ref|YP_003303178.1| peptidylprolyl isomerase [Sulfurospirillum deleyianum DSM 6946]
gi|268616778|gb|ACZ11143.1| Peptidylprolyl isomerase [Sulfurospirillum deleyianum DSM 6946]
Length = 172
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 76/150 (50%), Gaps = 18/150 (12%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
L SA VVF+T G+I F P +AP+ ++ LV+ G YN F RV K F+ Q D
Sbjct: 16 LCSAEVVFETTQGNIVFALKPEIAPKACENFEGLVKKGYYNGVSFHRVIKNFMIQGGDPT 75
Query: 86 G-GRSAPMNEVQRVEAEKTVVGEFSD------VKHVRGILSMGRYSDPNSAASSFSILLG 138
G GR E G F D + + GIL+M + N+ S F I
Sbjct: 76 GTGRG----------GESIFGGAFEDEFKPFVMFNKAGILAMAN-AGRNTNRSQFFITTT 124
Query: 139 DAPHLDGQYAVFGKVTKGDETLRKLEGLPT 168
PHL+G++ +FG+V +G + +RKLE +PT
Sbjct: 125 PTPHLNGRHTIFGEVIEGMDVVRKLENVPT 154
>gi|395767181|ref|ZP_10447716.1| hypothetical protein MCS_00649 [Bartonella doshiae NCTC 12862]
gi|395414494|gb|EJF80936.1| hypothetical protein MCS_00649 [Bartonella doshiae NCTC 12862]
Length = 193
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V GD+ +AP+ V I KL + G YN F RV GF+AQ DV G+
Sbjct: 30 LVLSLKNGDVVIRLRSDLAPKHVAQIKKLTKEGAYNNVVFHRVIPGFMAQTGDVKFGKKG 89
Query: 91 PMN-EVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
N +++RV + + EFS RG + M R DP+SA S F I DA L+G
Sbjct: 90 SANFDLKRVGMGGSDYPNIPAEFSKQPFKRGTVGMARSQDPHSANSQFFICFDDAAFLNG 149
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177
QY V G+V KG + + K+ G P
Sbjct: 150 QYTVIGEVIKGMDVVDKITKGSVNNNGSVADP 181
>gi|209885351|ref|YP_002289208.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Oligotropha
carboxidovorans OM5]
gi|209873547|gb|ACI93343.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Oligotropha
carboxidovorans OM5]
Length = 205
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V T G + +AP + I +L R G YN F RV GF+AQ D
Sbjct: 57 IVIDTTKGRVVVQLRTDLAPHHAERIKQLAREGYYNNVPFHRVIDGFMAQTGDGANFNGT 116
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
++ ++AE FS+V + RG++ M R ++P+SA S F I+ D P L+G+Y V
Sbjct: 117 GGSKYPNLKAE------FSNVPYTRGVVGMARSANPDSANSQFFIMYNDYPSLNGKYTVI 170
Query: 151 GKVTKGDETLRKLE 164
G+V G E + KL+
Sbjct: 171 GQVVSGMENVDKLK 184
>gi|312116033|ref|YP_004013629.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Rhodomicrobium vannielii ATCC 17100]
gi|311221162|gb|ADP72530.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Rhodomicrobium vannielii ATCC 17100]
Length = 154
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T G + P +AP V I +L Y+ F RV GF+AQ D G
Sbjct: 9 LVLETTKGRVVIELRPDLAPNHVARIKELADEKFYDGVVFHRVIDGFMAQTGDPTG---- 64
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
R + K + EFS H RG++SM R + P+SA S F I DA LDG+Y V+
Sbjct: 65 ----TGRGGSGKNLKAEFSRESHQRGVVSMARANHPDSADSQFFICFDDASFLDGKYTVW 120
Query: 151 GKVTKGDETLRKLE-GLPTR 169
GKV +G + + K+E G P +
Sbjct: 121 GKVIEGMDNVDKIERGEPVK 140
>gi|376295834|ref|YP_005167064.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
desulfuricans ND132]
gi|323458395|gb|EGB14260.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Desulfovibrio
desulfuricans ND132]
Length = 181
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
L S RVV + P +AP+ V I +L R+ Y+ F RV GF+AQ D
Sbjct: 35 LASGRVVIEMR---------PDLAPRHVARIKELARMKFYDGIVFHRVIDGFMAQTGDPT 85
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G R + T+ EFS+ RG + M R SDP+SA S F I AP LDG
Sbjct: 86 G--------TGRGGSGMTLPAEFSNAPFQRGTVGMARASDPDSADSQFFICFAPAPFLDG 137
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIH 184
QY V+G+V G E + +++ T + G+ P + I++
Sbjct: 138 QYTVWGQVVSGMEFVDQIKK-GTGQNGMVSNPDKIISLR 175
>gi|421870243|ref|ZP_16301878.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor [Burkholderia
cenocepacia H111]
gi|444358636|ref|ZP_21160026.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
cenocepacia BC7]
gi|444371559|ref|ZP_21171109.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
cenocepacia K56-2Valvano]
gi|198036557|emb|CAR52454.1| peptidyl-prolyl cis-trans isomerase A precursor [Burkholderia
cenocepacia J2315]
gi|358069769|emb|CCE52756.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor [Burkholderia
cenocepacia H111]
gi|443595166|gb|ELT63768.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
cenocepacia K56-2Valvano]
gi|443603680|gb|ELT71671.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
cenocepacia BC7]
Length = 191
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 85/171 (49%), Gaps = 15/171 (8%)
Query: 25 QLGSARVVFQ--TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
Q +A V Q T+ GDI YP AP++V + V+ G YN F RV KGF+ Q
Sbjct: 22 QTATAHPVVQLKTSQGDIRVELYPEKAPKSVANFLDYVKAGQYNGTIFHRVIKGFMIQ-- 79
Query: 83 DVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-- 140
G N ++ + + +K++ G ++M R SDPNSA + F I D
Sbjct: 80 ----GGGYKTNFEEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNSG 135
Query: 141 ---PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
P+ DG YAVFGKV G + ++K+EG+ T G +P + + I S+
Sbjct: 136 LDYPNPDGNGYAVFGKVVSGLDVVKKIEGVATTSRGPMQDVPAQPVVIESA 186
>gi|169343238|ref|ZP_02864249.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens C str. JGS1495]
gi|169298536|gb|EDS80617.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens C str. JGS1495]
Length = 170
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99
I+ YP +AP TV + LV+ G Y+ F R+ GF+ Q G + N R++
Sbjct: 15 IKIELYPEIAPNTVRNFVSLVKKGFYDGLTFHRIIPGFMIQGGCPEG--TGMGNPGYRIK 72
Query: 100 AEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDET 159
E +++KH RG++SM R + +SA S F I+ ++PHLDGQYA FGKV +G +
Sbjct: 73 GEFIRNKFPNNLKHSRGVISMARAMNFDSAGSQFFIMHENSPHLDGQYASFGKVIEGMDV 132
Query: 160 LRKLEGLPT 168
+ K+ + T
Sbjct: 133 VDKIANVKT 141
>gi|420242476|ref|ZP_14746516.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF080]
gi|398067373|gb|EJL58890.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium sp. CF080]
Length = 169
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +L R Y+ F RV F+AQ DV G+
Sbjct: 11 LIMETTKGKVVISLLPDLAPGHVARIKELARENAYDGVVFHRVIPDFMAQTGDVKFGKQG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS V HVRG SM R PNSA S F I DAP L+
Sbjct: 71 GADFNPARAGMGGSEKPDLKAEFSAVPHVRGTCSMARSQSPNSANSQFFICFTDAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKL-EGLPTR 169
QY V+G+V +G + + ++ +G P +
Sbjct: 131 QYTVWGQVIEGMDFIDQIKKGEPVK 155
>gi|325849395|ref|ZP_08170754.1| peptidyl-prolyl cis-trans isomerase B [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480136|gb|EGC83207.1| peptidyl-prolyl cis-trans isomerase B [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 172
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ L++ Y+ F R+ K F+ Q D G G P ++ E
Sbjct: 20 LYPEIAPNTVNNFISLIKNNFYDGLIFHRIIKNFMIQGGDPEGSGMGGPG---YAIKGEF 76
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
+ G +++ H +G+LSM R P+SA S F I+ +PHLDG+YA FGK+ +G E + K
Sbjct: 77 SSNGFENNLAHDKGVLSMARSFMPDSAGSQFFIMHKKSPHLDGEYAGFGKIIEGIEEIDK 136
Query: 163 LEGLPT 168
+ + T
Sbjct: 137 IANVKT 142
>gi|167563303|ref|ZP_02356219.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
oklahomensis EO147]
gi|167570475|ref|ZP_02363349.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
oklahomensis C6786]
Length = 191
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTTQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K+ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFDEKPTRAPIPLESKNGLKNATGTIAMARTSDPNSATAQFFINTVDNAGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+E PT G +P + I I S+
Sbjct: 144 NGYAVFGKVVSGMDVVKKIEATPTTVRGPMRDVPEKPIVIESA 186
>gi|381403083|ref|ZP_09927767.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pantoea sp.
Sc1]
gi|380736282|gb|EIB97345.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pantoea sp.
Sc1]
Length = 190
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 6 RIFLTLITLIG--TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLG 63
R ITL+ + S+Q G V+ T+ G+IE AP TV + V G
Sbjct: 4 RTLTAAITLLALSSVSAQALAAKGDTHVLLTTSAGNIELELNNQKAPITVKNFVDYVNSG 63
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGR 122
YN F RV GF+ Q GG + M Q+ + + E + ++++RG +SM R
Sbjct: 64 FYNNTIFHRVIPGFMVQ----GGGFTTDM---QQKQTNAPIKNEADNGLRNLRGTISMAR 116
Query: 123 YSDPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-M 176
+D +SA S F + + D LD GQ YAVFGK+ KG + + K+ +PT+ G + +
Sbjct: 117 TADKDSATSQFFLNVADNAFLDHGQRDFGYAVFGKIVKGQDVVEKISQVPTKDVGPYQNV 176
Query: 177 PTERITIHSS 186
P++ + I S+
Sbjct: 177 PSKPVVILSA 186
>gi|291392011|ref|XP_002712575.1| PREDICTED: peptidylprolyl isomerase-like 3 [Oryctolagus cuniculus]
Length = 282
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 13/164 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 124 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 183
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
N + + E E+S+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 184 G--NSIWGKKFED----EYSEYLKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKY 236
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSSYY 188
VFGKV G ETL +LE LP ++ + + + ITIH++ +
Sbjct: 237 TVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF 280
>gi|163746650|ref|ZP_02154007.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oceanibulbus
indolifex HEL-45]
gi|161379764|gb|EDQ04176.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oceanibulbus
indolifex HEL-45]
Length = 184
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G ++ VAP+ V I +L G Y+ F RV GF+AQ DV G+S ++ R
Sbjct: 33 GTVKIDLLEDVAPEHVARITELAEDGAYDGVVFHRVIDGFMAQTGDVQFGKSG--GDISR 90
Query: 98 VEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ V EFSD+ G++ M R P+SA S F I+ AP LDGQY V GKV
Sbjct: 91 AGMGGSDMPDVAAEFSDIAFETGVVGMARSQSPDSANSQFFIMFDAAPFLDGQYTVVGKV 150
Query: 154 TKGDETLRKLE 164
T+G + + ++
Sbjct: 151 TEGQDVVDAIK 161
>gi|107028740|ref|YP_625835.1| peptidylprolyl isomerase [Burkholderia cenocepacia AU 1054]
gi|116690101|ref|YP_835724.1| peptidylprolyl isomerase [Burkholderia cenocepacia HI2424]
gi|170733435|ref|YP_001765382.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
cenocepacia MC0-3]
gi|254247824|ref|ZP_04941145.1| Peptidylprolyl isomerase [Burkholderia cenocepacia PC184]
gi|105897904|gb|ABF80862.1| Peptidylprolyl isomerase [Burkholderia cenocepacia AU 1054]
gi|116648190|gb|ABK08831.1| Peptidylprolyl isomerase [Burkholderia cenocepacia HI2424]
gi|124872600|gb|EAY64316.1| Peptidylprolyl isomerase [Burkholderia cenocepacia PC184]
gi|169816677|gb|ACA91260.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Burkholderia
cenocepacia MC0-3]
Length = 191
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T+ GDI YP AP++V + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTSQGDIRVELYPEKAPKSVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K++ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFEEKPTRAPIPLESRNGLKNLTGTIAMARTSDPNSATAQFFINTVDNGGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+EG+ T G +P + + I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEGVATTSRGPMQDVPAQPVVIESA 186
>gi|410613693|ref|ZP_11324748.1| peptidyl-prolyl cis-trans isomerase-like 1 [Glaciecola psychrophila
170]
gi|410166845|dbj|GAC38637.1| peptidyl-prolyl cis-trans isomerase-like 1 [Glaciecola psychrophila
170]
Length = 220
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 33 FQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAP 91
+T+ GDI F P+VAP V L LG Y+ F R+ GF+AQ D G G+ P
Sbjct: 73 LKTSKGDILIEFMPNVAPTHVSSTIYLTSLGYYDNTIFHRIIPGFMAQGGDPTGTGKGNP 132
Query: 92 MNEVQRVEAEKTVVGEFSD-VKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ GEFSD +KH +G +LSM S PN+ S F + +P LDG++ +
Sbjct: 133 GYQY---------AGEFSDELKHTQGGLLSMAN-SGPNTDGSQFFLTFTASPWLDGKHTI 182
Query: 150 FGKVTKGDETLRKLEGLPTR 169
FGKV +G + L L+ +R
Sbjct: 183 FGKVVQGMDVLESLKKYGSR 202
>gi|83718640|ref|YP_442469.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia thailandensis
E264]
gi|83652465|gb|ABC36528.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia thailandensis
E264]
Length = 208
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 47 VQLKTTQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 100
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K+ G ++M R SDPNSA + F I D P+ DG
Sbjct: 101 KTNFDEKPTRAPIPLESKNGLKNATGTIAMARTSDPNSATAQFFINTVDNAGLDYPNPDG 160
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+E PT G +P + I I S+
Sbjct: 161 NGYAVFGKVVSGMDVVKKIEATPTTVRGPMRDVPEKPIVIESA 203
>gi|398848269|ref|ZP_10605093.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pseudomonas sp. GM84]
gi|398249041|gb|EJN34436.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pseudomonas sp. GM84]
Length = 185
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ T++G +E AP + + + V G YN F RV GF+ Q GG
Sbjct: 24 TPHVLLDTSFGQVEIELNAEKAPISTKNFLEYVDSGFYNNTIFHRVIPGFMVQ-----GG 78
Query: 88 R------SAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGD-- 139
P N+ R EA + +++ RG LSM R SDPNSA S F I + D
Sbjct: 79 GFTEQMVQKPTNDPIRNEAG-------NGLQNTRGTLSMARTSDPNSATSQFFINVADND 131
Query: 140 --APHLDGQYAVFGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
P D YAVFGKVTKG E + ++ PT K+G+ +P + + I S+ D
Sbjct: 132 FLNPGRDRGYAVFGKVTKGMEVVDQIVNSPTTVKKGMRDVPADPVFIKSAKRID 185
>gi|212695806|ref|ZP_03303934.1| hypothetical protein ANHYDRO_00339 [Anaerococcus hydrogenalis DSM
7454]
gi|212677200|gb|EEB36807.1| hypothetical protein ANHYDRO_00339 [Anaerococcus hydrogenalis DSM
7454]
Length = 188
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ L++ Y+ F R+ K F+ Q D G G P ++ E
Sbjct: 36 LYPEIAPNTVNNFISLIKNNFYDGLIFHRIIKNFMIQGGDPEGSGMGGPG---YAIKGEF 92
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
+ G +++ H +G+LSM R P+SA S F I+ +PHLDG+YA FGK+ +G E + K
Sbjct: 93 SSNGFENNLAHDKGVLSMARSFMPDSAGSQFFIMHKKSPHLDGEYAGFGKIIEGIEEIDK 152
Query: 163 LEGLPT 168
+ + T
Sbjct: 153 IANVKT 158
>gi|194387556|dbj|BAG60142.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 3 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E E+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GNSIWGKKFEDE---YSEY--LKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLP 167
VFGKV G ETL +LE LP
Sbjct: 117 VFGKVIDGLETLDELEKLP 135
>gi|182624292|ref|ZP_02952077.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens D str. JGS1721]
gi|177910510|gb|EDT72883.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Clostridium
perfringens D str. JGS1721]
Length = 170
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 40 IEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99
I+ YP +AP TV + LV+ G Y+ F R+ GF+ Q G + N R++
Sbjct: 15 IKIELYPEIAPNTVRNFVSLVKKGFYDGLTFHRIIPGFMIQGGCPEG--TGMGNPGYRIK 72
Query: 100 AEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDET 159
E T +++KH RG++SM R + +SA S I+ ++PHLDGQYA FGKV +G +
Sbjct: 73 GEFTRNQFPNNLKHSRGVISMARAMNFDSAGSQLFIMHENSPHLDGQYASFGKVIEGMDV 132
Query: 160 LRKLEGLPT 168
+ K+ + T
Sbjct: 133 VDKIANVKT 141
>gi|225715874|gb|ACO13783.1| Peptidyl-prolyl cis-trans isomerase-like 3 [Esox lucius]
Length = 161
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 13/164 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + AP++ ++ L G YN+ F R KGF+ Q D G G+
Sbjct: 3 VTLHTDLGDIKIELFCERAPKSCENFLALSAGGFYNSCIFHRNIKGFMVQTGDPTGTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
++ E E FS+ +KH VRG++SM + PN+ AS F PHLD +Y
Sbjct: 63 GTSIWGRKFEDE------FSEHLKHNVRGVVSMAN-NGPNTNASQFFFTYAKQPHLDMKY 115
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMP---TERITIHSSYY 188
VFGK+ G ETL +LE LP ++ + + +TIH++ +
Sbjct: 116 TVFGKLIDGFETLDELEKLPVNEKSFRPLTECHIKDVTIHANPF 159
>gi|167581384|ref|ZP_02374258.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
thailandensis TXDOH]
gi|167621095|ref|ZP_02389726.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
thailandensis Bt4]
gi|257138677|ref|ZP_05586939.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia thailandensis
E264]
Length = 191
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTTQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K+ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFDEKPTRAPIPLESKNGLKNATGTIAMARTSDPNSATAQFFINTVDNAGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+E PT G +P + I I S+
Sbjct: 144 NGYAVFGKVVSGMDVVKKIEATPTTVRGPMRDVPEKPIVIESA 186
>gi|338738200|ref|YP_004675162.1| peptidyl-prolyl cis-trans isomerase B [Hyphomicrobium sp. MC1]
gi|337758763|emb|CCB64588.1| peptidyl-prolyl cis-trans isomerase B (rotamase B)(PPIase B)
[Hyphomicrobium sp. MC1]
Length = 158
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T+ G + P +AP+ V+ I L R G Y+ F RV GF+AQ
Sbjct: 11 LLIETSKGPVVIELRPDLAPKHVERIKTLAREGFYDGIVFHRVIDGFMAQTG-------C 63
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + + + EF+ HVRG+ SM R S+PNSA S F I DA LD QY V+
Sbjct: 64 PQGRGTGGSSYENLPAEFNAEPHVRGVCSMARSSNPNSANSQFFICFDDARFLDKQYTVW 123
Query: 151 GKVTKGDETLRKL-EGLPTR 169
GKV +G + + ++ +G P +
Sbjct: 124 GKVIEGMDNVDQINKGEPPK 143
>gi|154247712|ref|YP_001418670.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Xanthobacter
autotrophicus Py2]
gi|154161797|gb|ABS69013.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Xanthobacter
autotrophicus Py2]
Length = 186
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 20 SQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVA 79
++ DPQ + T YG + P +AP+ V+ + L R G YN F RV GF+A
Sbjct: 26 TKPDPQ---NTLFLDTPYGRVVIQLRPDLAPKHVERMKTLTREGFYNNVPFHRVIDGFMA 82
Query: 80 QVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGD 139
Q D G ++ + AE FS V RG++ M R S P+SA S F I+ +
Sbjct: 83 QTGDGQYGNGTGGSKYPNLPAE------FSSVPFKRGVVGMARASSPDSANSQFFIMFDE 136
Query: 140 APHLDGQYAVFGKVTKGDETLRKLE 164
P L+ QY V G+V G E + K++
Sbjct: 137 TPSLNNQYTVVGQVVSGMEFVDKIK 161
>gi|170722997|ref|YP_001750685.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Pseudomonas
putida W619]
gi|169761000|gb|ACA74316.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Pseudomonas
putida W619]
Length = 185
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ VV T++G +E AP + + + V G YN F RV GF+ Q GG
Sbjct: 24 APHVVLDTSFGQVEIELDAEKAPVSTKNFLEYVDSGFYNNTIFHRVIPGFMVQG----GG 79
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGD----APHL 143
+ M VQ+ + + +++ RG LSM R SDPNSA S F I + D P
Sbjct: 80 FTEQM--VQKPTRDPIRNEAGNGLQNTRGTLSMARTSDPNSATSQFFINVADNDFLNPGR 137
Query: 144 DGQYAVFGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
D YAVFGKVTKG E + ++ PT K+G+ +P + + I S+ D
Sbjct: 138 DRGYAVFGKVTKGMEVVDQIVNSPTTVKKGMRDVPADPVFIKSAKRID 185
>gi|26991225|ref|NP_746650.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas putida KT2440]
gi|24986276|gb|AAN70114.1|AE016651_4 peptidyl-prolyl cis-trans isomerase A [Pseudomonas putida KT2440]
Length = 185
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 13/169 (7%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ T++G +E AP + + + V G YN F RV GF+ Q GG
Sbjct: 24 TPHVLLDTSFGQVEIELNAEKAPLSTKNFLQYVDSGFYNNTIFHRVIPGFMVQ----GGG 79
Query: 88 RSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGD----APH 142
+ M VQ+ + E S+ +++ RG LSM R S+PNSA S F I + D P
Sbjct: 80 FTDQM--VQK-NTNDPIKNEASNGLQNTRGTLSMARTSNPNSATSQFFINVADNDFLNPG 136
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
D YAVFGKVTKG E + ++ PT K+G+ +P + + I S+ D
Sbjct: 137 RDAGYAVFGKVTKGMEVVDQIVNSPTTIKKGMRDVPADPVYIKSAKRID 185
>gi|126438412|ref|YP_001059573.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 668]
gi|126217905|gb|ABN81411.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
668]
Length = 191
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTTQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K+ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFDEKPTRAPIPLESKNGLKNATGTIAMARTSDPNSATAQFFINTVDNAGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
YAVFGKV G + ++K+E PT G + +P + I I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEATPTTVRGQMRDVPEKPIVIESA 186
>gi|383771710|ref|YP_005450775.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium sp. S23321]
gi|381359833|dbj|BAL76663.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium sp. S23321]
Length = 187
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 4 VIRIFLTLITLIGT--ASSQEDP-QLGSAR-VVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+IRIF L L+ A +Q+ P L A +V T G I P +APQ + I +L
Sbjct: 1 MIRIFAVLAALVFAVPAVAQQLPANLDKANAIVIDTTKGRIVIKLRPDLAPQHAERIKQL 60
Query: 60 VRLGCYNTNHFFRVDKGFVAQVAD-----VVGGRSAPMNEVQRVEAEKTVVGEFSDVKHV 114
R G YN F RV GF+AQ D GG P + EFS V
Sbjct: 61 AREGYYNNVPFHRVMDGFMAQTGDGQNFNGTGGSKYP-----------NLKQEFSKVHFA 109
Query: 115 RGILSMGRYSDP-NSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLP 167
RGI+ M R D ++A S F I+ D LD QY V G+V +G + + KL+ P
Sbjct: 110 RGIVGMARRGDSVDTANSQFFIMFADGGSLDNQYTVIGEVVQGMDVVDKLKKAP 163
>gi|222148798|ref|YP_002549755.1| peptidyl prolyl cis-trans isomerase [Agrobacterium vitis S4]
gi|221735784|gb|ACM36747.1| peptidyl prolyl cis-trans isomerase [Agrobacterium vitis S4]
Length = 157
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 33 FQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA-- 90
+T G + +P +AP V I +L R G Y+ F RV F+AQ DV G+
Sbjct: 1 METTKGKVVISLFPDLAPGHVARIKELAREGAYDGVVFHRVIPDFMAQTGDVKFGKKGGE 60
Query: 91 ---PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
P + + EFS HVRG SM R PNSA S F I DAP L+ QY
Sbjct: 61 SFNPGRAGMGGSDKPDLKAEFSATPHVRGTCSMARSQSPNSANSQFFICFTDAPWLNKQY 120
Query: 148 AVFGKVTKG 156
+V+G+V +G
Sbjct: 121 SVWGQVIEG 129
>gi|424895023|ref|ZP_18318597.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393179250|gb|EJC79289.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 190
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQSADHY----LTIQLKNGPVVIQLMPEVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV +GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIEGFMAQTGDVKYGNMEKGFDASLAGTGSSDMPDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
DPNSA S F I+ D L+GQY V GKV G E + K++ R EG
Sbjct: 128 DPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK----RGEG 171
>gi|385799720|ref|YP_005836124.1| Peptidylprolyl isomerase [Halanaerobium praevalens DSM 2228]
gi|309389084|gb|ADO76964.1| Peptidylprolyl isomerase [Halanaerobium praevalens DSM 2228]
Length = 173
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N +I+ YP AP TV + +L++ Y+ F RV KGF+ Q G + N
Sbjct: 13 NGEEIKIELYPKKAPNTVRNFIELIKTDYYDGLKFHRVIKGFMIQGGCPDG--TGMGNPG 70
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+ E + G +D+ H RG++SM R + P+SA S F I+ D+ HLDG+YA FG+V +
Sbjct: 71 YSIAGEFSANGFNNDLSHKRGVISMARSAAPDSAGSQFFIVHQDSLHLDGKYAAFGEVVE 130
Query: 156 GDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSV 202
G + + ++ + T G MP E I S DT E EK +
Sbjct: 131 GIDVVDQIAEVDT---GARDMPRED-QIMESLEVDTFGEEYEKAEKI 173
>gi|53719854|ref|YP_108840.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
K96243]
gi|53723759|ref|YP_103284.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei ATCC
23344]
gi|76809694|ref|YP_334069.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
1710b]
gi|121601565|ref|YP_993473.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei SAVP1]
gi|124383497|ref|YP_001029095.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei NCTC
10229]
gi|126450591|ref|YP_001080981.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei NCTC
10247]
gi|126453901|ref|YP_001066851.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei 1106a]
gi|134277004|ref|ZP_01763719.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 305]
gi|167001795|ref|ZP_02267587.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei PRL-20]
gi|167720286|ref|ZP_02403522.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei DM98]
gi|167739283|ref|ZP_02412057.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 14]
gi|167816499|ref|ZP_02448179.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 91]
gi|167846409|ref|ZP_02471917.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei B7210]
gi|167894990|ref|ZP_02482392.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 7894]
gi|167903374|ref|ZP_02490579.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei NCTC 13177]
gi|167916842|ref|ZP_02503933.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 112]
gi|167919627|ref|ZP_02506718.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei BCC215]
gi|217420635|ref|ZP_03452140.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
576]
gi|226198848|ref|ZP_03794411.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
Pakistan 9]
gi|237812908|ref|YP_002897359.1| peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei
MSHR346]
gi|242315067|ref|ZP_04814083.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
1106b]
gi|254177613|ref|ZP_04884268.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei ATCC
10399]
gi|254184415|ref|ZP_04891005.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 1655]
gi|254198270|ref|ZP_04904692.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei S13]
gi|254209316|ref|ZP_04915662.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei JHU]
gi|254259282|ref|ZP_04950336.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
1710a]
gi|254297081|ref|ZP_04964534.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 406e]
gi|254358015|ref|ZP_04974288.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei
2002721280]
gi|386861242|ref|YP_006274191.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
1026b]
gi|403519280|ref|YP_006653414.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Burkholderia
pseudomallei BPC006]
gi|418540454|ref|ZP_13105993.1| peptidyl-prolyl cis-trans isomerase A precursor [Burkholderia
pseudomallei 1258a]
gi|418546703|ref|ZP_13111900.1| peptidyl-prolyl cis-trans isomerase A precursor [Burkholderia
pseudomallei 1258b]
gi|418552946|ref|ZP_13117789.1| peptidyl-prolyl cis-trans isomerase A precursor [Burkholderia
pseudomallei 354e]
gi|52210268|emb|CAH36247.1| peptidyl-prolyl cis-trans isomerase A precursor [Burkholderia
pseudomallei K96243]
gi|52427182|gb|AAU47775.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei ATCC
23344]
gi|76579147|gb|ABA48622.1| peptidyl-prolyl cis-trans isomerase A precursor [Burkholderia
pseudomallei 1710b]
gi|121230375|gb|ABM52893.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei SAVP1]
gi|124291517|gb|ABN00786.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei NCTC
10229]
gi|126227543|gb|ABN91083.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
1106a]
gi|126243461|gb|ABO06554.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei NCTC
10247]
gi|134250654|gb|EBA50733.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 305]
gi|147750089|gb|EDK57160.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei JHU]
gi|148027142|gb|EDK85163.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei
2002721280]
gi|157807284|gb|EDO84454.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 406e]
gi|160698652|gb|EDP88622.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei ATCC
10399]
gi|169655011|gb|EDS87704.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei S13]
gi|184214946|gb|EDU11989.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 1655]
gi|217396047|gb|EEC36064.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
576]
gi|225928948|gb|EEH24972.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
Pakistan 9]
gi|237503397|gb|ACQ95715.1| peptidyl-prolyl cis-trans isomerase [Burkholderia pseudomallei
MSHR346]
gi|242138306|gb|EES24708.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
1106b]
gi|243062480|gb|EES44666.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei PRL-20]
gi|254217971|gb|EET07355.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia pseudomallei
1710a]
gi|385361806|gb|EIF67678.1| peptidyl-prolyl cis-trans isomerase A precursor [Burkholderia
pseudomallei 1258a]
gi|385363462|gb|EIF69236.1| peptidyl-prolyl cis-trans isomerase A precursor [Burkholderia
pseudomallei 1258b]
gi|385372355|gb|EIF77473.1| peptidyl-prolyl cis-trans isomerase A precursor [Burkholderia
pseudomallei 354e]
gi|385658370|gb|AFI65793.1| peptidyl-prolyl cis-trans isomerase A precursor [Burkholderia
pseudomallei 1026b]
gi|403074923|gb|AFR16503.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei BPC006]
Length = 191
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQLKTTQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K+ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFDEKPTRAPIPLESKNGLKNATGTIAMARTSDPNSATAQFFINTVDNAGLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+E PT G +P + I I S+
Sbjct: 144 NGYAVFGKVVSGLDVVKKIEATPTTVRGPMRDVPEKPIVIESA 186
>gi|218679391|ref|ZP_03527288.1| peptidyl-prolyl cis-trans isomerase A signal peptide protein
[Rhizobium etli CIAT 894]
Length = 172
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQSADHY----LTIQLKNGPVVIQLMPDVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVG---------EFSDVKHVRGILS 119
F RV +GF+AQ DV G N + +A G EFS VRG +
Sbjct: 68 AFHRVIEGFMAQTGDVKYG-----NMEKNFDASLAGTGGSDLPDLPAEFSKTPFVRGTVG 122
Query: 120 MGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
M R DPNSA S F I+ D L+GQY V GKV G E + K++ R EG
Sbjct: 123 MARSQDPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK----RGEG 171
>gi|209885350|ref|YP_002289207.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Oligotropha
carboxidovorans OM5]
gi|337741028|ref|YP_004632756.1| peptidyl-prolyl cis-trans isomerase Ppi [Oligotropha
carboxidovorans OM5]
gi|386030045|ref|YP_005950820.1| peptidyl-prolyl cis-trans isomerase Ppi [Oligotropha
carboxidovorans OM4]
gi|209873546|gb|ACI93342.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oligotropha
carboxidovorans OM5]
gi|336095113|gb|AEI02939.1| peptidyl-prolyl cis-trans isomerase Ppi [Oligotropha
carboxidovorans OM4]
gi|336098692|gb|AEI06515.1| peptidyl-prolyl cis-trans isomerase Ppi [Oligotropha
carboxidovorans OM5]
Length = 154
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G++ P +AP V I +LVR G Y+ F RV GF+AQ G +
Sbjct: 8 LILETTQGEVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGCPHG--TG 65
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
Q+++AE F+ HVRG +SM R ++P+S S F I DA LD QY V+
Sbjct: 66 TGGSGQKLKAE------FNAEPHVRGTVSMARAANPDSGDSQFFICFDDARFLDKQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKVT G E + K++
Sbjct: 120 GKVTSGMENVDKIK 133
>gi|301760168|ref|XP_002915899.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like
[Ailuropoda melanoleuca]
Length = 311
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P+T ++ L YN F R KGF+ Q D G GR
Sbjct: 153 VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG 212
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
N + + E E+S+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 213 G--NSIWGKKFED----EYSEYLKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKY 265
Query: 148 AVFGKVTKGDETLRKLEGLPTRKE 171
VFGKV G ETL +LE LP ++
Sbjct: 266 TVFGKVIDGLETLDELEKLPVNEK 289
>gi|167830170|ref|ZP_02461641.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei 9]
gi|238561597|ref|ZP_00441705.2| peptidyl-prolyl cis-trans isomerase [Burkholderia mallei GB8 horse
4]
gi|254191448|ref|ZP_04897952.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei Pasteur 52237]
gi|254200236|ref|ZP_04906602.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei FMH]
gi|147749832|gb|EDK56906.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia mallei FMH]
gi|157939120|gb|EDO94790.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
pseudomallei Pasteur 52237]
gi|238524182|gb|EEP87616.1| peptidyl-prolyl cis-trans isomerase [Burkholderia mallei GB8 horse
4]
Length = 187
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 26 VQLKTTQGDIRVELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 79
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K+ G ++M R SDPNSA + F I D P+ DG
Sbjct: 80 KTNFDEKPTRAPIPLESKNGLKNATGTIAMARTSDPNSATAQFFINTVDNAGLDYPNPDG 139
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + ++K+E PT G +P + I I S+
Sbjct: 140 NGYAVFGKVVSGLDVVKKIEATPTTVRGPMRDVPEKPIVIESA 182
>gi|342879387|gb|EGU80638.1| hypothetical protein FOXB_08861 [Fusarium oxysporum Fo5176]
Length = 621
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ----VADVVG 86
V T YGDI +P AP+TV++ + G YN F RV + F+ Q + D G
Sbjct: 472 AVIHTTYGDIHIRLFPDAAPKTVENFVTHSKNGYYNNTIFHRVIRKFMIQGGDPLGDGTG 531
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G S E + EFS +KH + + PN+ AS F I P LDG+
Sbjct: 532 GESIWGREFE---------DEFSSLKHDKPYTVSMANAGPNTNASQFFITTEKTPWLDGK 582
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
+ +FG+ T+G + + K+E + T KE P E I +
Sbjct: 583 HTIFGRATQGFDIIHKIENVRTHKE----KPEEDIKV 615
>gi|260553807|ref|ZP_05826077.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. RUH2624]
gi|260405111|gb|EEW98611.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. RUH2624]
Length = 185
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
++ V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ
Sbjct: 18 WANSLVEMQTNLGNIEIELYDDKAPISVNNFKSYIKSGFYKETIFHRVIPGFMAQ----G 73
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
GG +A M E K G + + + RG L+M R SDP+SA S F I + D L+
Sbjct: 74 GGMTANMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSDPDSATSQFFINVADNKFLNR 131
Query: 146 Q-----YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ +PT G+
Sbjct: 132 SPGNPGYAVFGKVVKGMDVVDRIVQVPTSNYGM 164
>gi|332188394|ref|ZP_08390118.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Sphingomonas sp. S17]
gi|332011540|gb|EGI53621.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Sphingomonas sp. S17]
Length = 151
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 29 ARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-G 87
+++ + GD+ P +AP+ V I L G Y+ F RV GF+AQ D G G
Sbjct: 6 SKLTLTLDSGDVVITLRPDLAPEHVARIGGLANEGFYDGVVFHRVIPGFMAQGGDPTGTG 65
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
S + + EF+ HVRG SM R +DPNSA S F I DA LD QY
Sbjct: 66 MSG--------SDKPNLKQEFNAEPHVRGTCSMARTNDPNSANSQFFICFDDARFLDRQY 117
Query: 148 AVFGKVTKGDETLRKL-EGLPTRKEGIFVMPT 178
V+G+V G E + L +G P R G + T
Sbjct: 118 TVWGQVESGMEHVDALPKGEPPRNPGKIIKAT 149
>gi|220903351|ref|YP_002478663.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219867650|gb|ACL47985.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 169
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 80/153 (52%), Gaps = 18/153 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V+ +T GDI +P AP+TV + + V G YN F RV GF+ Q GG A
Sbjct: 7 VLLETTSGDILLELFPDKAPKTVANFLQYVDDGFYNNTIFHRVIPGFMIQ----GGGLGA 62
Query: 91 PMNEVQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNSAASSFSILLGD-------AP 141
M+E +A + V +D VK+ RG ++M R DP+SA + F I L D AP
Sbjct: 63 RMDE----KATREPVANEADNGVKNERGTIAMARTRDPHSATAQFFINLVDNDFLNHSAP 118
Query: 142 HLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGI 173
LDG Y FG+VT+G E + K+ + T+ G+
Sbjct: 119 TLDGWGYCAFGRVTEGMEVVEKIAKVKTKSMGM 151
>gi|339325367|ref|YP_004685060.1| peptidyl-prolyl cis-trans isomerase A [Cupriavidus necator N-1]
gi|338165524|gb|AEI76579.1| peptidyl-prolyl cis-trans isomerase A [Cupriavidus necator N-1]
Length = 194
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 25/175 (14%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
Q + RV F T+ G YP AP+TV + + V+ G Y+ F RV GF+ Q
Sbjct: 28 QKAAERVQFVTSAGKFTIELYPEAAPKTVANFLEYVKSGFYSGTIFHRVINGFMVQ---- 83
Query: 85 VGG------RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLG 138
GG + P +EA S +K+ G ++M R SDPNSA + F + +
Sbjct: 84 -GGGFDRDMKEKPTRAPIPLEAR-------SGLKNKAGTVAMARTSDPNSATAQFFVNVV 135
Query: 139 DAPHLD------GQYAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
D +LD YAVFGKV +G ET+ K++ +PT G + +P I I S+
Sbjct: 136 DNSNLDYPQPDGNGYAVFGKVVEGMETIDKIKSVPTTAYGPMRNVPAAPIVIESA 190
>gi|417097330|ref|ZP_11959137.1| peptidyl-prolyl cis-trans isomerase A signal peptide protein
[Rhizobium etli CNPAF512]
gi|327193334|gb|EGE60238.1| peptidyl-prolyl cis-trans isomerase A signal peptide protein
[Rhizobium etli CNPAF512]
Length = 190
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQAADHY----LTIQLKNGPVVIQLMPEVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV +GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIEGFMAQTGDVKYGNMEKGFDASLAGTGSSDMPDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
DPNSA S F I+ D L+GQY V GKV G E + K++ R EG
Sbjct: 128 DPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK----RGEG 171
>gi|336425779|ref|ZP_08605794.1| hypothetical protein HMPREF0994_01800 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336011659|gb|EGN41613.1| hypothetical protein HMPREF0994_01800 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 163
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +GD+ F YP +AP TV + V G YN + R+ K +V Q +
Sbjct: 4 IITTEGFGDMVFELYPGLAPVTVKNFVDTVNSGFYNGLAWCRIVKDYVIQAG-------S 56
Query: 91 PMNEVQRVEAEKTVVGEFSD------VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
P N++ ++E + GEF++ + H RG LSM R ++A + F ++ DA LD
Sbjct: 57 PDNDIM-TDSEWHIKGEFAENGVPNPIPHKRGALSMARDDAYDTAGTQFFVVHKDAHKLD 115
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTE 179
G+YA FG++ G E L ++ LPT + P E
Sbjct: 116 GRYAAFGQLVSGFEVLDRIADLPTYGPESWNKPLE 150
>gi|308274460|emb|CBX31059.1| Peptidyl-prolyl cis-trans isomerase [uncultured Desulfobacterium
sp.]
Length = 203
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 90/180 (50%), Gaps = 18/180 (10%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
++N+I F + + GT S Q Q G ++VV QTN+G+IE AP TV + + V
Sbjct: 16 LVNLIACFF--VPVFGTLS-QAAGQ-GVSQVVIQTNFGNIEIELASEKAPNTVKNFLQYV 71
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSM 120
Y+ F RV KGF+ Q GG + M VQ+ + + +++VRG ++M
Sbjct: 72 NSNFYSGTVFHRVIKGFMIQ----GGGFTKDM--VQKKTLAPIAIESNNGLQNVRGTIAM 125
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQ--------YAVFGKVTKGDETLRKLEGLPTRKEG 172
R DPNSA+S F I D L+ Y VFGKV KG + + K+E + +G
Sbjct: 126 ARTGDPNSASSQFFINTKDNDFLNYSSPTARGYGYTVFGKVIKGMDVVDKIESVEISSKG 185
>gi|294085743|ref|YP_003552503.1| peptidyl prolyl cis-trans isomerase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665318|gb|ADE40419.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 171
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Query: 5 IRIFLTLITLIG--TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRL 62
+R F + IG S+Q D G ++ +T+ G +E P VAP V I +LV
Sbjct: 1 MRTFFVSLVGIGFLLMSTQNDAVAGET-MLLETSQGQVEITMLPDVAPNHVARITELVND 59
Query: 63 GCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGR 122
G Y+ F RV GF+AQ D + + EF+D ++ G + M R
Sbjct: 60 GFYDGIIFHRVIPGFMAQTGDPT--------GTGMGGSGTNLDAEFTDYQYREGTVGMAR 111
Query: 123 YSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
+PNSA S F I HL GQY V+G+V +G + ++KL
Sbjct: 112 AMNPNSADSQFFICFDGCSHLTGQYTVWGQVERGMDIVKKL 152
>gi|347754788|ref|YP_004862352.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Candidatus
Chloracidobacterium thermophilum B]
gi|347587306|gb|AEP11836.1| Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Candidatus Chloracidobacterium thermophilum B]
Length = 190
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T +G+I F F+P +AP+ I L+R G Y+ F RV+ G + Q D +
Sbjct: 21 AVIKTEFGNIVFEFFPDIAPKHTAQIQGLIRSGFYDGTAFHRVEPGSLIQGGDPNSKTGS 80
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYS-DPNSAASSFSILLGDAPHLDGQYAV 149
+ EFS +KHVRG +S R + D NSA + F I P D QY++
Sbjct: 81 EETWGMGRPDLPKIPAEFSALKHVRGTVSAARVANDKNSATTQFFICCRAHPEWDNQYSI 140
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
FG+V G + + PT EG P ++IT+ S
Sbjct: 141 FGRVIAGMNVVDIISNAPT-VEGT-SRPKQKITMLS 174
>gi|430003731|emb|CCF19520.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Rhizobium sp.]
Length = 171
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +L R Y+ F RV F+AQ DV G+
Sbjct: 11 LIMETTKGKVVISLMPDLAPGHVARIKELARENAYDGVVFHRVIADFMAQTGDVQYGKKG 70
Query: 91 -----PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + + EFS V HVRG SM R +PNSA S F I +AP L+
Sbjct: 71 GASFNPSRAGMGGSDKPDLKAEFSAVPHVRGTCSMARSQNPNSANSQFFICFTEAPWLNK 130
Query: 146 QYAVFGKVTKGDETLRKLE 164
QY V+G+V G E + +++
Sbjct: 131 QYTVWGQVIDGMEHIDQIK 149
>gi|424057477|ref|ZP_17794994.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter nosocomialis
Ab22222]
gi|425739428|ref|ZP_18857628.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
WC-487]
gi|445435466|ref|ZP_21440315.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC021]
gi|407439993|gb|EKF46511.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter nosocomialis
Ab22222]
gi|425496424|gb|EKU62553.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
WC-487]
gi|444755592|gb|ELW80171.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC021]
Length = 185
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
++ V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ
Sbjct: 18 WANSLVEMQTNLGNIEIELYDDKAPISVNNFKSYIKSGFYKETIFHRVIPGFMAQ----G 73
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
GG +A M E K G + + + RG L+M R SDP+SA S F I + D L+
Sbjct: 74 GGMTANMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSDPDSATSQFFINVADNKFLNR 131
Query: 146 Q-----YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ +PT G+
Sbjct: 132 SPGNPGYAVFGKVVKGMDVVDRIVQVPTSNYGM 164
>gi|398995592|ref|ZP_10698472.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pseudomonas sp. GM21]
gi|398129629|gb|EJM18988.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pseudomonas sp. GM21]
Length = 185
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
+I L T++ A+ + V+ T G IE P AP++ + K V G Y
Sbjct: 4 KIALVAGTVLFAANLMAATPTKAPHVLLDTTNGQIEIELDPVKAPESTKNFLKYVNSGFY 63
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYS 124
N F RV GF+ Q GG + M Q+ E + E + H VRG LSM R S
Sbjct: 64 NNTIFHRVIPGFMIQ----GGGFTQQM---QQKPTEAPIKNESKNGLHNVRGTLSMARTS 116
Query: 125 DPNSAASSFSILLGDAPHLD--GQYAVFGKVTKGDETLRKLEGLP-TRKEGIFVMPTERI 181
DP+SA S F + + D LD YAVFGKV KG + + + P T++ G+ +P + +
Sbjct: 117 DPDSATSQFFVNVKDNDFLDQGDGYAVFGKVVKGMDVVDVIVNSPTTKRNGMSDVPADPV 176
Query: 182 TIHSSYYYD 190
I S+ D
Sbjct: 177 YIKSAKVID 185
>gi|190891760|ref|YP_001978302.1| peptidyl-prolyl cis-trans isomerase A [Rhizobium etli CIAT 652]
gi|190697039|gb|ACE91124.1| peptidyl-prolyl cis-trans isomerase A signal peptide protein
[Rhizobium etli CIAT 652]
Length = 190
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQAADHY----LTIQLKNGPVVIQLMPEVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV +GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIEGFMAQTGDVKYGNMEKGFDASLAGTGSSDMPDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
DPNSA S F I+ D L+GQY V GKV G E + K++ R EG
Sbjct: 128 DPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK----RGEG 171
>gi|451343818|ref|ZP_21912884.1| hypothetical protein HMPREF9943_01109 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449337393|gb|EMD16555.1| hypothetical protein HMPREF9943_01109 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 157
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ L Y F RV GF+ Q V ++ ++ E
Sbjct: 17 LYPDIAPLTVENFVNLCNQHFYQGLIFHRVIPGFMIQGGGV--DKNMQAKSADPIKGEFA 74
Query: 104 VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
G +++KH RG+LSM R +SA+S F I+ DAPHLDGQYA FGKV +G + + +
Sbjct: 75 SNGVKNNLKHTRGVLSMARTMILDSASSQFFIMHADAPHLDGQYAAFGKVLEGLDVIDNI 134
>gi|254786477|ref|YP_003073906.1| peptidyl-prolyl cis-trans isomerase A precursor [Teredinibacter
turnerae T7901]
gi|237685326|gb|ACR12590.1| peptidyl-prolyl cis-trans isomerase A precursor [Teredinibacter
turnerae T7901]
Length = 200
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 13/169 (7%)
Query: 5 IRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
I + +IG+A++ + + +VVF+T+ G I + AP+TV + V
Sbjct: 8 IGLVFAAFCVIGSAAAAKKEAKDNPQVVFETDLGKITIELFADEAPKTVANFLSYVDSEF 67
Query: 65 YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRY 123
Y F RV GFV Q GG + + + E + VV E ++ +K++ G LSM R
Sbjct: 68 YVGTIFHRVIPGFVVQG----GGLTY---DFKHKETKDPVVNESANGLKNLEGTLSMARV 120
Query: 124 SDPNSAASSFSILLGDAPHLD-----GQYAVFGKVTKGDETLRKLEGLP 167
SDP+SA S F I + + PHLD Y VFGKV +G E ++K+E P
Sbjct: 121 SDPDSATSQFFINVANNPHLDPDGDKAGYTVFGKVVEGFENVKKIEKEP 169
>gi|46107194|ref|XP_380656.1| hypothetical protein FG00480.1 [Gibberella zeae PH-1]
Length = 621
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ---- 80
+ G+A + +T YGDI +P AP+ V++ + G YN F RV + F+ Q
Sbjct: 467 ETGTA-AILRTTYGDIHIRLFPDAAPKAVENFVTHSKNGYYNNTIFHRVIRKFMIQGGDP 525
Query: 81 VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
+ D GG S E + EFS +KH + + PN+ AS F I
Sbjct: 526 LGDGTGGESIWGREFE---------DEFSSLKHDKPFTVSMANAGPNTNASQFFITTEKT 576
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
P LDG++ +FG+ T+G + + K+E + T KE P E I I
Sbjct: 577 PWLDGKHTIFGRATQGFDIIHKIENVRTHKE----QPEEDIKI 615
>gi|431895035|gb|ELK04828.1| Peptidyl-prolyl cis-trans isomerase-like 3 [Pteropus alecto]
Length = 204
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 29 ARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-G 87
+ V T+ GDI+ + P+ ++ L YN F R KGF+ Q D G G
Sbjct: 44 SSVTLHTDVGDIKIEVFCERTPKACENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTG 103
Query: 88 RSAPMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
R N + + E E+S+ +KH VRG++SM + PN+ S F I G PHLD
Sbjct: 104 RGG--NSIWSKKFED----EYSEYLKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDM 156
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
+Y VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 157 KYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 200
>gi|408399352|gb|EKJ78457.1| hypothetical protein FPSE_01345 [Fusarium pseudograminearum CS3096]
Length = 621
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ---- 80
+ G+A + +T YGDI +P AP+ V++ + G YN F RV + F+ Q
Sbjct: 467 ETGTA-AILRTTYGDIHIRLFPDAAPKAVENFVTHSKNGYYNNTIFHRVIRKFMIQGGDP 525
Query: 81 VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
+ D GG S E + EFS +KH + + PN+ AS F I
Sbjct: 526 LGDGTGGESIWGREFE---------DEFSSLKHDKPFTVSMANAGPNTNASQFFITTEKT 576
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
P LDG++ +FG+ T+G + + K+E + T KE P E I I
Sbjct: 577 PWLDGKHTIFGRATQGFDIIHKIENVRTHKE----QPEEDIKI 615
>gi|296134918|ref|YP_003642160.1| Peptidylprolyl isomerase [Thiomonas intermedia K12]
gi|295795040|gb|ADG29830.1| Peptidylprolyl isomerase [Thiomonas intermedia K12]
Length = 214
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+V F T G+ P+ AP+TV + V+ G Y F RV GF+ Q GG +
Sbjct: 53 KVEFVTTMGNFVVQLDPARAPKTVANFLDYVKSGFYKGTIFHRVIPGFMVQG----GGFT 108
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ-- 146
A ++Q+ + E + +++++G ++M R SDPNSA S F + + D P LD
Sbjct: 109 A---DMQKKPTRAPIPLESQNGLRNLKGTIAMARTSDPNSATSQFFVNVVDNPSLDYPKP 165
Query: 147 ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + K+ +PT+ EG+F +P + I I +
Sbjct: 166 DGYGYAVFGKVISGMNVIEKIVAVPTKSEGMFQDVPVKPIVIEDA 210
>gi|410692431|ref|YP_003623052.1| Peptidyl-prolyl cis-trans isomerase A precursor (PPIase A)
(Rotamase A) (Cyclophilin A) [Thiomonas sp. 3As]
gi|294338855|emb|CAZ87189.1| Peptidyl-prolyl cis-trans isomerase A precursor (PPIase A)
(Rotamase A) (Cyclophilin A) [Thiomonas sp. 3As]
Length = 195
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
+V F T G+ P+ AP+TV + V+ G Y F RV GF+ Q GG +
Sbjct: 34 KVEFVTTMGNFVVQLDPARAPKTVANFLDYVKSGFYKGTIFHRVIPGFMVQG----GGFT 89
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ-- 146
A ++Q+ + E + +++++G ++M R SDPNSA S F + + D P LD
Sbjct: 90 A---DMQKKPTRAPIPLESQNGLRNLKGTIAMARTSDPNSATSQFFVNVVDNPSLDYPKP 146
Query: 147 ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
YAVFGKV G + K+ +PT+ EG+F +P + I I +
Sbjct: 147 DGYGYAVFGKVISGMNVIEKIVAVPTKNEGMFQDVPVKPIVIEDA 191
>gi|402850676|ref|ZP_10898868.1| Peptidyl-prolyl cis-trans isomerase [Rhodovulum sp. PH10]
gi|402499057|gb|EJW10777.1| Peptidyl-prolyl cis-trans isomerase [Rhodovulum sp. PH10]
Length = 155
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T G + P +AP V I +LVR Y+ F RV + F+AQ G +
Sbjct: 9 LVLETTKGPVTIEMRPDLAPTHVARIKQLVREKFYDGIVFHRVIEDFMAQTGCPHGTGTG 68
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
Q+++AE FS KH RG +SM R P+S S F I DAP LDGQY V+
Sbjct: 69 --GSGQKLKAE------FSKEKHTRGTVSMARAQSPDSGDSQFFICFTDAPWLDGQYTVW 120
Query: 151 GKVTKGDETLRKLE 164
G V G E + K++
Sbjct: 121 GMVVDGMENVDKIK 134
>gi|86749988|ref|YP_486484.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Rhodopseudomonas palustris HaA2]
gi|86573016|gb|ABD07573.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Rhodopseudomonas palustris HaA2]
Length = 155
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T GD++ P +AP V I +LVR G Y+ F RV +GF+AQ
Sbjct: 8 LILETTQGDVKIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIEGFMAQTG-------C 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + K + EF+ HVRG SM R + P+S S F I DA LD QY V+
Sbjct: 61 PQ-GTGTGGSGKKLKAEFNKEPHVRGTTSMARAASPDSGDSQFFICFDDARFLDNQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKV +G E + K++
Sbjct: 120 GKVIEGMENVDKIK 133
>gi|39935670|ref|NP_947946.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Rhodopseudomonas palustris CGA009]
gi|192291252|ref|YP_001991857.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Rhodopseudomonas palustris TIE-1]
gi|39649523|emb|CAE28045.1| peptidyl prolyl cis-trans isomerase [Rhodopseudomonas palustris
CGA009]
gi|192285001|gb|ACF01382.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Rhodopseudomonas palustris TIE-1]
Length = 155
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 15/143 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---G 87
++ +T G ++ P +AP V I +LVR G Y+ F RV +GF+AQ G G
Sbjct: 8 LILETTQGTVKIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIEGFMAQTGCPQGTGMG 67
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
S K + EF+ HVRG+ SM R ++P+S S F I DA LD QY
Sbjct: 68 GSG-----------KKLKAEFNAEPHVRGVASMARAANPDSGDSQFFICFDDARFLDKQY 116
Query: 148 AVFGKVTKGDETLRKLE-GLPTR 169
V+GKV +G E + K++ G P +
Sbjct: 117 TVWGKVIEGMENVDKIKRGEPVK 139
>gi|325981667|ref|YP_004294069.1| peptidyl-prolyl isomerase [Nitrosomonas sp. AL212]
gi|325531186|gb|ADZ25907.1| Peptidylprolyl isomerase [Nitrosomonas sp. AL212]
Length = 193
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 22/179 (12%)
Query: 5 IRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
I FL L + A++Q + +V +TN G+I F YP AP+TV++ + V G
Sbjct: 6 ILFFLFLFSTPLYANAQ------NIKVEMKTNVGNIVFELYPDKAPKTVENFLQYVDDGF 59
Query: 65 YNTNHFFRVDKGFVAQVADVVGGRSAPMNE-VQRVEAEKTVVGEFSDVKHVRGILSMGRY 123
++ F RV GF+ Q GG +N+ R + +D+K+ G ++M R
Sbjct: 60 FSNTIFHRVIAGFMIQ----GGGFDTALNQKPTRAPIQNEAA---NDLKNEPGTIAMART 112
Query: 124 SDPNSAASSFSILLGD-------APHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIF 174
SDP+SA++ F I + D AP+ G YAVFGKV G + + K+ +PT +G F
Sbjct: 113 SDPHSASAQFFINVADNKFLNFKAPNQSGYGYAVFGKVISGMDIVNKIASMPTGSKGPF 171
>gi|308801869|ref|XP_003078248.1| cyclophilin (ISS) [Ostreococcus tauri]
gi|116056699|emb|CAL52988.1| cyclophilin (ISS) [Ostreococcus tauri]
Length = 176
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 20 SQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVA 79
+ DP G+ V+ T +GD+ Y AP+T ++ F+L R G Y+ F RV F+
Sbjct: 8 GENDP-FGAPSVILHTTHGDVALELYYKHAPKTCENFFELARRGYYDGTVFHRVIADFMV 66
Query: 80 QVADVVG-GRSAPMNEVQRVEAEKTVVGEFSD-----VKHV-RGILSMGRYSDPNSAASS 132
Q D G GR E G+F D +KHV GILSM S PN+ S
Sbjct: 67 QGGDPTGTGRG----------GESVFGGKFEDEISKGLKHVGAGILSMAN-SGPNTNKSQ 115
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
F I L P LDG++A+FG+V G +R + + K
Sbjct: 116 FFITLAATPWLDGKHAIFGRVESGMHAVRAMGAVKVDKN 154
>gi|256544571|ref|ZP_05471943.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Anaerococcus
vaginalis ATCC 51170]
gi|256399460|gb|EEU13065.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Anaerococcus
vaginalis ATCC 51170]
Length = 172
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102
YP +AP TV++ L++ Y+ F RV K F+ Q D G G P ++ E
Sbjct: 20 LYPEIAPNTVNNFISLIKNNFYDGLIFHRVIKDFMIQGGDPQGSGMGGPG---YAIKGEF 76
Query: 103 TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRK 162
+ G +++ H +G+LSM R P+SA S F I+ +PHLDG YA FGK+ +G E + K
Sbjct: 77 SSNGFENNLAHDKGVLSMARSFMPDSAGSQFFIMHKKSPHLDGDYAGFGKIIEGIEEIDK 136
Query: 163 LEGLPT 168
+ + T
Sbjct: 137 IANVKT 142
>gi|421588963|ref|ZP_16034180.1| peptidyl-prolyl cis-trans isomerase A [Rhizobium sp. Pop5]
gi|403706210|gb|EJZ21552.1| peptidyl-prolyl cis-trans isomerase A [Rhizobium sp. Pop5]
Length = 190
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQS----ADHYLTIQLKNGPVVIQLMPEVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVG---------EFSDVKHVRGILS 119
F RV GF+AQ DV G N + +A G EFS VRG +
Sbjct: 68 AFHRVIPGFMAQTGDVKYG-----NMEKNFDASLAGTGGSDLPDLPAEFSKTPFVRGTVG 122
Query: 120 MGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
M R DPNSA S F I+ D L+GQY V GKV G E + K++
Sbjct: 123 MARAQDPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK 167
>gi|209549345|ref|YP_002281262.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424913973|ref|ZP_18337337.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|209535101|gb|ACI55036.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392850149|gb|EJB02670.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 190
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQSADHY----LTIQLKNGPVVIQLMPEVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIDGFMAQTGDVKYGNMEKGFDASLAGTGSSDMPDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
DPNSA S F I+ D L+GQY V GKV G E + K++ R EG
Sbjct: 128 DPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK----RGEG 171
>gi|319935130|ref|ZP_08009570.1| peptidylprolyl isomerase [Coprobacillus sp. 29_1]
gi|319809955|gb|EFW06338.1| peptidylprolyl isomerase [Coprobacillus sp. 29_1]
Length = 160
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP VAP TV + L+ Y+ F RV GF+ Q GG A M E +A +
Sbjct: 20 LYPDVAPITVKNFISLIEKNFYDGLIFHRVIPGFMIQG----GGLDAQMKE----KACPS 71
Query: 104 VVGEF------SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ GEF +D+ H RG+LSM R +SA+S F I+ APHLDG+YA FGK+ G
Sbjct: 72 IKGEFRSNGVQNDLLHTRGVLSMARTMVKDSASSQFFIMHDVAPHLDGEYAAFGKIIDGL 131
Query: 158 ETLRKLEGLPTR 169
+ + ++ T
Sbjct: 132 DVVDEIASAQTN 143
>gi|297568940|ref|YP_003690284.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Desulfurivibrio alkaliphilus AHT2]
gi|296924855|gb|ADH85665.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Desulfurivibrio alkaliphilus AHT2]
Length = 192
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 1 MLNVIRIFLTLITLIGTA-SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKL 59
+L + IF L+T G A ++ DP+ RV+ +T G+I + AP T + +
Sbjct: 3 LLVLATIFCLLLTAQGKAVAAPADPR---PRVIMETTAGEITIELFAEEAPVTTANFLQY 59
Query: 60 VRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGIL 118
VR G Y+ F RV GFV Q GG P ++++ + E ++ +K++RG L
Sbjct: 60 VRDGFYDGLIFHRVIPGFVIQ-----GGGFTP--DMEQRPTRAAIKNEATNGLKNLRGTL 112
Query: 119 SMGRYSDPNSAASSFSILLGDAPHLDGQ--------YAVFGKVTKGDETLRKLEGLPTRK 170
SM R +SA S F + L D +LD + YAVFGKV +G E + ++ PT
Sbjct: 113 SMARTGVVDSATSQFFVNLTDNANLDHRGTSPNAYGYAVFGKVVEGMEVVDQIAAQPTAS 172
Query: 171 EGIFV-MPTERITIHSSY 187
+G F +P + I I +Y
Sbjct: 173 KGFFQDVPVQEIEIIKAY 190
>gi|219850492|ref|YP_002464925.1| peptidyl-prolyl isomerase [Chloroflexus aggregans DSM 9485]
gi|219544751|gb|ACL26489.1| Peptidylprolyl isomerase [Chloroflexus aggregans DSM 9485]
Length = 247
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 70/138 (50%), Gaps = 15/138 (10%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMN 93
T G+I P +APQTV++ L R YN + RV F+AQ D G G P
Sbjct: 99 TPRGEIVIELLPDIAPQTVNNFVFLARQNFYNGLTWHRVLPNFMAQGGDPNGDGTGGP-- 156
Query: 94 EVQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
T+ EF+D + GI++M R +DPNSA S F I AP L+ QY +FG
Sbjct: 157 -------GYTIPAEFTDKILFDQPGIVAMARSTDPNSAGSQFFITTAPAPWLNEQYTIFG 209
Query: 152 KVTKGDETLRKLEGLPTR 169
+V KG E ++G+P R
Sbjct: 210 RVIKGQEI---VDGIPLR 224
>gi|398999273|ref|ZP_10702021.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pseudomonas sp. GM18]
gi|398132208|gb|EJM21490.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pseudomonas sp. GM18]
Length = 187
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ +T G IE P AP + + + V G YN F RV GF+AQ GG
Sbjct: 26 APHVLLETTNGQIEIELDPVKAPISTKNFLEYVDSGFYNNTIFHRVIPGFMAQ----GGG 81
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDA----PH 142
+A M Q+ E + + E S+ H VRG LSM R S+P+SA S F I + D P
Sbjct: 82 FTAQM---QQKETKAPIKNEASNGLHNVRGTLSMARTSNPDSATSQFFINVADNAFLDPG 138
Query: 143 LDGQYAVFGKVTKGDETLRKL-EGLPTRKEGIFVMPTERITIHSSYYYD 190
D YAVF KV KG + + + T K+G+ +P + + I S+ D
Sbjct: 139 RDAGYAVFAKVVKGMDVVDIIVNSQTTTKQGMQNVPVDPVLIKSAKRID 187
>gi|188584276|ref|YP_001927721.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Methylobacterium populi BJ001]
gi|179347774|gb|ACB83186.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Methylobacterium populi BJ001]
Length = 153
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T G + P +AP V+ I L G Y+ F RV GF+AQ D G S
Sbjct: 8 IVLETTKGRVVIALRPDLAPNHVERIKTLASQGFYDGVPFHRVIDGFMAQTGDPTGTGSG 67
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+E+ + AE F+ HVRG SM R + P+SA S F I DA LD QY V+
Sbjct: 68 -GSELPDLNAE------FNAEPHVRGTCSMARTNFPHSANSQFFICFSDARFLDRQYTVW 120
Query: 151 GKVTKGDETLRKLE-GLPTR 169
GKV +G E + ++ G P R
Sbjct: 121 GKVIEGMEVVDTIKRGEPVR 140
>gi|50344948|ref|NP_001002146.1| peptidyl-prolyl cis-trans isomerase-like 3 [Danio rerio]
gi|47937917|gb|AAH71392.1| Zgc:86715 [Danio rerio]
Length = 161
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GD++ + AP++ ++ L G YN F R KGF+ Q D G G+
Sbjct: 3 VTLHTDLGDMKIELFCEKAPKSCENFLALCAGGFYNGCIFHRNIKGFIVQTGDPTGTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
++ E E FS+ +KH VRG+++M + PN+ AS F PHLD +Y
Sbjct: 63 GTSIWGRKFEDE------FSEHLKHNVRGVVAMAN-NGPNTNASQFFFTYAKQPHLDMKY 115
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSSYY 188
VFGK+ G ETL ++E LP ++ + RI TIH++ +
Sbjct: 116 TVFGKIIDGLETLDEIEKLPVNEKTFRPLNDVRIKDVTIHANPF 159
>gi|188584274|ref|YP_001927719.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Methylobacterium populi BJ001]
gi|179347772|gb|ACB83184.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Methylobacterium populi BJ001]
Length = 183
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L T++ + + G V +T G + P +AP+ V + L+ G YN
Sbjct: 10 LALGTVLSASLFAAPARAGENTVTLETKDGRVTIELRPEIAPKHVKQLKTLISQGFYNGL 69
Query: 69 HFFRVDKGFVAQVADV----VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYS 124
F RV GF+ Q D GG S P + EFS RG + M R
Sbjct: 70 KFHRVIDGFMVQTGDPKGNGTGGSSLP-----------NIPAEFSSAPFKRGTVGMARSG 118
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
DPNSA S F I LGDA L+ Y V G VT G + + K++
Sbjct: 119 DPNSANSQFFICLGDAEFLNNNYTVVGVVTSGMDVVDKIK 158
>gi|261364950|ref|ZP_05977833.1| peptidylprolyl isomerase A [Neisseria mucosa ATCC 25996]
gi|288566744|gb|EFC88304.1| peptidylprolyl isomerase A [Neisseria mucosa ATCC 25996]
Length = 188
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
R V +TN G+I + AP+TV + R G Y+ F RV GF+ Q GG
Sbjct: 25 RAVIETNMGNINLSLDEAKAPKTVANFVSYARKGFYDNTVFHRVIDGFMIQ-----GGGF 79
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ-- 146
P ++ + +K V+ E + +K+ G ++M R DPNSA S F I D L+ +
Sbjct: 80 TP--DLAQKATDKAVINEADNGLKNTVGTIAMARTGDPNSATSQFFINTADNAFLNFKNK 137
Query: 147 ------YAVFGKVTKGDETLRKLEGLPTRKEG 172
YAVFGKVT G + +R++ PT G
Sbjct: 138 TPQGYGYAVFGKVTSGMDVVRQISKTPTETRG 169
>gi|73540822|ref|YP_295342.1| peptidyl-prolyl isomerase [Ralstonia eutropha JMP134]
gi|72118235|gb|AAZ60498.1| Peptidylprolyl isomerase [Ralstonia eutropha JMP134]
Length = 195
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 25/170 (14%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG-- 87
RV F TN G YP AP+TV + + V+ G Y+ F RV GF+ Q GG
Sbjct: 34 RVQFVTNQGKFTVEVYPDAAPKTVANFMEYVKSGFYSGTIFHRVINGFMVQ-----GGGF 88
Query: 88 ----RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
+ P +EA+ + +K+ G ++M R ++PNSA + F + + D P+L
Sbjct: 89 DREMKEKPTRAPIPLEAQ-------NGLKNKAGTVAMARTANPNSATAQFFVNVVDNPNL 141
Query: 144 D------GQYAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
D YAVFGKV +G +T+ K++ +PT G + +P I I S+
Sbjct: 142 DYPQPDGNGYAVFGKVVEGMDTIEKIKNVPTTAYGPMRNVPAAPIVIESA 191
>gi|423712833|ref|ZP_17687131.1| hypothetical protein MCQ_01587 [Bartonella washoensis Sb944nv]
gi|395410529|gb|EJF77083.1| hypothetical protein MCQ_01587 [Bartonella washoensis Sb944nv]
Length = 191
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
L V+ + ++ ++ +D S+ +V GD+ +AP+ V I +L
Sbjct: 3 LRVLAVLTSVFCFFSLSAVADD----SSVLVLSLKKGDVVIRLRSDLAPKHVAQIKRLTE 58
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRVEAEKT----VVGEFSDVKHVRG 116
G YN F RV GF+AQ DV G+ + +++RV + + EFS RG
Sbjct: 59 EGAYNNVVFHRVIPGFMAQTGDVKFGKKGSADFDLKRVGTGGSNYPNIPAEFSKQPFKRG 118
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176
+ M R DP+SA S F I DA L+GQY V G+V KG + + +++ T G
Sbjct: 119 TVGMARSQDPHSANSQFFICFSDADFLNGQYTVVGEVIKGMDVVDQIKKGTTSNNGSVAD 178
Query: 177 P 177
P
Sbjct: 179 P 179
>gi|118577015|ref|YP_876758.1| peptidyl-prolyl cis-trans isomerase (rotamase) [Cenarchaeum
symbiosum A]
gi|118195536|gb|ABK78454.1| peptidyl-prolyl cis-trans isomerase (rotamase) [Cenarchaeum
symbiosum A]
Length = 545
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 25/201 (12%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
VV T GDI F+ AP V++ LV G Y+ F RV +GF+ Q D ++
Sbjct: 27 VVLHTKSGDIAIEFFADDAPGHVENYISLVESGFYDRTVFHRVIEGFMIQGGDP---KTK 83
Query: 91 P-----MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
P + E + + EF+ +KH RGILSM R +P+SA S F I+ + LDG
Sbjct: 84 PDGYDSVGEWGTGDPGYMIDAEFNTIKHNRGILSMARSQNPDSAGSQFFIVHRASNFLDG 143
Query: 146 QYAVFGKVT--KGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSVL 203
QY FG+V +G +TL + L T P E I + E EI E V+
Sbjct: 144 QYTAFGRVVTQEGLDTLDVIATLETP-------PGETIPLRWG-----EGEITSAE--VV 189
Query: 204 KRRLTASVIEI-ERQRMKCFP 223
R +++++ E +RM P
Sbjct: 190 DRSSVDNLLDLGEPERMNLPP 210
>gi|167042489|gb|ABZ07214.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[uncultured marine crenarchaeote HF4000_ANIW133C7]
Length = 553
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 19/144 (13%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V+ N G +P AP TV + KLV G Y+ F R+ GF+ Q D
Sbjct: 44 VLISMNDGTFMIELFPEDAPNTVHNFLKLVESGYYDGIVFHRILPGFMIQAGD------- 96
Query: 91 PMNEVQRVEAEK----------TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
+ ++AE+ T+ EF+ ++H RGI+SM R P+SA S F I+ D+
Sbjct: 97 --PNTKDLDAERSSWGQGGPGYTIYAEFNTLQHDRGIVSMARSQHPDSAGSQFFIVHKDS 154
Query: 141 PHLDGQYAVFGKVTKGDETLRKLE 164
LDGQY FGK+ G + R L+
Sbjct: 155 NFLDGQYTAFGKLIPGTYSNRLLD 178
>gi|159044697|ref|YP_001533491.1| putative peptidyl-prolyl cis-trans isomerase [Dinoroseobacter
shibae DFL 12]
gi|157912457|gb|ABV93890.1| putative peptidyl-prolyl cis-trans isomerase [Dinoroseobacter
shibae DFL 12]
Length = 174
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 21 QEDPQLGSAR-----VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDK 75
QED + + ++ + G + P VAP+ + + +L R G Y+ F RV
Sbjct: 2 QEDASMADIKDPENTILMELKDGTVTIELLPDVAPKHAERMKELARAGAYDNVVFHRVID 61
Query: 76 GFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAAS 131
GF+AQ DV G +A ++ + + EFS + H RG L R ++P+SA S
Sbjct: 62 GFMAQTGDVANGNAAKDFNIRMAGTGGSDLPDLPAEFSSLPHDRGTLGAARSANPDSANS 121
Query: 132 SFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
F I D L+GQY V+G+V G E + K+
Sbjct: 122 QFFINFSDNHFLNGQYTVYGRVISGMEHVDKI 153
>gi|114327881|ref|YP_745038.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis
CGDNIH1]
gi|114316055|gb|ABI62115.1| peptidyl-prolyl cis-trans isomerase [Granulibacter bethesdensis
CGDNIH1]
Length = 186
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 10 TLITLIGTASSQEDPQLGSAR--VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
T + G A S+ + Q V YG + P +AP+ V+ + +L R Y+
Sbjct: 11 TTAMIGGIAMSETEAQAADPNNLVYLDLPYGRVVIELRPDLAPKHVERVKELCREHFYDN 70
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDP 126
F RV +GF+AQ D G S +++ + AE F+D H +RG + R +P
Sbjct: 71 TPFHRVIEGFMAQGGDPTGTGSG-GSKLPDLPAE------FTDDAHFLRGTVGAARTQNP 123
Query: 127 NSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
NSA S F I+ AP LDGQY ++GKV +G E + K++
Sbjct: 124 NSANSQFFIMFAPAPSLDGQYTIWGKVIQGMEFVDKIK 161
>gi|296535362|ref|ZP_06897562.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC
49957]
gi|296264304|gb|EFH10729.1| peptidyl-prolyl cis-trans isomerase [Roseomonas cervicalis ATCC
49957]
Length = 191
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 17/152 (11%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A++Q+D + + F G + P +APQ V+ I LVR G Y+ F RV +GF
Sbjct: 26 AAAQDDRE---NTLYFDLKDGRVVIKLRPDLAPQHVERIKTLVRQGFYDGTPFHRVIEGF 82
Query: 78 VAQVADVVGGRS--APMNEVQRVEAEKTVVGEFS---DVKHVRGILSMGRYSDPNSAASS 132
+AQ D G + +PM ++ EFS + +RG+ M R ++PNSA S
Sbjct: 83 MAQGGDPTGTGTGGSPMPDLP---------AEFSAPSKARFLRGVCGMARTANPNSANSQ 133
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
F I+ AP LDGQY ++G+V G E + K++
Sbjct: 134 FFIMFAPAPSLDGQYTIWGQVMSGMEFVDKIK 165
>gi|424881586|ref|ZP_18305218.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392517949|gb|EIW42681.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 190
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQSADHY----LTIQLKNGPVVIQLMPDVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIDGFMAQTGDVKYGNMEKGFDASLAGTGSSDMPDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
DPNSA S F I+ D L+GQY V GKV G E + K++
Sbjct: 128 DPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK 167
>gi|421079973|ref|ZP_15540909.1| Rotamase A [Pectobacterium wasabiae CFBP 3304]
gi|401705460|gb|EJS95647.1| Rotamase A [Pectobacterium wasabiae CFBP 3304]
Length = 189
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 18/184 (9%)
Query: 11 LITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHF 70
LI+L TA S + V+ T+ G+IE AP +V + + V G YN F
Sbjct: 12 LISL--TAFSPAFAASSTTHVLLTTSAGNIELSLDNQKAPVSVKNFVEYVNNGFYNGTTF 69
Query: 71 FRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNS 128
RV GF+ Q GG S MN+ +A + +D +++ RG ++M R +D +S
Sbjct: 70 HRVIPGFMVQ----GGGFSGEMNQ----KAPNAPIKNEADNGLRNQRGTIAMARTADKDS 121
Query: 129 AASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERIT 182
A S F I + D LD GQ YAVFGKV KG E + K+ +PT+ G + +PT I
Sbjct: 122 ATSQFFINIADNAFLDHGQRDFGYAVFGKVVKGMEVVDKISQVPTKNVGPYQNVPTTPIV 181
Query: 183 IHSS 186
I S+
Sbjct: 182 IQSA 185
>gi|424890401|ref|ZP_18314000.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393172619|gb|EJC72664.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 190
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQSADHY----LTVQLKDGPVVIQLMPEVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV +GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIEGFMAQTGDVKYGNMEKGFDASLAGTGSSDMPDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
DPNSA S F I+ D L+GQY V GKV G E + K++ R EG
Sbjct: 128 DPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK----RGEG 171
>gi|150389097|ref|YP_001319146.1| peptidyl-prolyl isomerase [Alkaliphilus metalliredigens QYMF]
gi|149948959|gb|ABR47487.1| Peptidylprolyl isomerase [Alkaliphilus metalliredigens QYMF]
Length = 232
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G IE YP VAP TV + L+ G Y+ F RV GF+ Q GG
Sbjct: 73 GIIEIELYPEVAPNTVKNFVSLIENGHYDGLIFHRVIPGFMIQ-----GGDPNGNGSGGP 127
Query: 98 VEAEKTVVGEF------SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
A + GEF +++ H RG++SM R DPNSA S F I+ A HLDG YA FG
Sbjct: 128 GYA---IEGEFLSNQFENNLLHERGVISMARSQDPNSAGSQFFIMTEKASHLDGDYAGFG 184
Query: 152 KVTKGDETLRKL 163
+V G + + ++
Sbjct: 185 QVVTGMDVVDEI 196
>gi|365888825|ref|ZP_09427562.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
sp. STM 3809]
gi|365335484|emb|CCE00093.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
sp. STM 3809]
Length = 154
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 69/137 (50%), Gaps = 14/137 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---G 87
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ G G
Sbjct: 8 LILETTQGPVTIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIDGFMAQTGCPQGTGMG 67
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
S K + EF+ HVRG SM R ++P+S S F I DA LD QY
Sbjct: 68 GSG-----------KKLKAEFNAEPHVRGTASMARAANPDSGDSQFFICFDDARFLDKQY 116
Query: 148 AVFGKVTKGDETLRKLE 164
V+GKVT+G E + K++
Sbjct: 117 TVWGKVTEGMENVDKIK 133
>gi|227326800|ref|ZP_03830824.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 194
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ RV+ T+ G+IE AP +V + + V G YN F RV GF+ Q GG
Sbjct: 28 TTRVLLTTSAGNIELSLDNQKAPVSVKNFVEYVNNGFYNGTTFHRVIPGFMVQ----GGG 83
Query: 88 RSAPMNEVQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD- 144
S M++ +A + +D +++ RG ++M R SD +SA S F I + D LD
Sbjct: 84 FSGEMSQ----KATNAPIKNEADNGLRNQRGTIAMARTSDKDSATSQFFINVADNAFLDH 139
Query: 145 GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGKV KG E + K+ +PT+ G + +PT + I S+
Sbjct: 140 GQRDFGYAVFGKVVKGMEVVDKISQVPTKNVGPYQNVPTTPVVIQSA 186
>gi|220925039|ref|YP_002500341.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Methylobacterium nodulans ORS 2060]
gi|219949646|gb|ACL60038.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Methylobacterium nodulans ORS 2060]
Length = 179
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---G 87
V T G I P +AP+ V I LV+ G YN F RV GF+AQ D G G
Sbjct: 27 VYLDTKDGRITIQLRPDLAPKHVQQIKTLVKQGFYNGVPFHRVIDGFMAQTGDPTGTGMG 86
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
+S ++ + AE F+ RG + M R DPNSA S F I GDA L+ QY
Sbjct: 87 KS----KLPDIPAE------FTPTPFKRGTVGMARAQDPNSANSQFFICFGDASFLNNQY 136
Query: 148 AVFGKVTKGDETLRKLE 164
V G+VT G + K++
Sbjct: 137 TVVGEVTSGMNVVDKIK 153
>gi|344268276|ref|XP_003405987.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like
[Loxodonta africana]
Length = 268
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG- 86
S V T+ GDI+ + P+T ++ L Y+ F R KGF+ Q D G
Sbjct: 107 SQSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYHGCIFHRNIKGFMVQTGDPTGS 166
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
GR N + + E E+S+ +KH VRG++SM + PN+ S F I G PHLD
Sbjct: 167 GRGG--NSIWGKKFED----EYSEYLKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLD 219
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKE 171
+Y VFGKV G ETL +LE LP ++
Sbjct: 220 MKYTVFGKVIDGLETLDELEKLPVNEK 246
>gi|167035043|ref|YP_001670274.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Pseudomonas
putida GB-1]
gi|166861531|gb|ABY99938.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Pseudomonas
putida GB-1]
Length = 185
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ T++G +E AP + + + V G YN F RV GF+ Q GG
Sbjct: 24 TPHVLLDTSFGQVEIELNAEKAPVSTKNFLQYVDSGFYNNTIFHRVIPGFMVQG----GG 79
Query: 88 RSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGD----APH 142
+ M VQ+ + E S+ + + RG LSM R SDPNSA S F I + D P
Sbjct: 80 FTDQM--VQK-NTNDPIKNEASNGLLNTRGTLSMARTSDPNSATSQFFINVADNDFLNPG 136
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
D YAVFGKVTKG E + ++ PT K+G+ +P + + I S+ D
Sbjct: 137 RDRGYAVFGKVTKGMEVVDQIVNSPTTIKKGMRDVPADPVYIKSAKRID 185
>gi|389696217|ref|ZP_10183859.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Microvirga sp. WSM3557]
gi|388585023|gb|EIM25318.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Microvirga sp. WSM3557]
Length = 155
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 8/140 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V+ I L R G Y+ F RV +GF+AQ D G +
Sbjct: 8 IIMETTKGRVVIELRPDLAPGHVERIKTLSRQGFYDNVPFHRVIEGFMAQTGDPTGTGTG 67
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+++ ++AE F+ HVRG+ SM R + P+SA S F I+ DA LD QY V+
Sbjct: 68 -GSDLPDLKAE------FNAEPHVRGVCSMARTNFPHSANSQFFIVFDDARFLDKQYTVW 120
Query: 151 GKVTKGDETLRKLE-GLPTR 169
GKVT+G E + K++ G P R
Sbjct: 121 GKVTEGMENVDKIKRGEPVR 140
>gi|114707079|ref|ZP_01439978.1| ATP/GTP-binding site motif A (P-loop):Peptidyl-prolyl cis-trans
isomerase, cyclophilin type [Fulvimarina pelagi
HTCC2506]
gi|114537629|gb|EAU40754.1| ATP/GTP-binding site motif A (P-loop):Peptidyl-prolyl cis-trans
isomerase, cyclophilin type [Fulvimarina pelagi
HTCC2506]
Length = 159
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 8/140 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ T G + P +AP+ V I +L R Y+ F RV GF+AQ D G A
Sbjct: 10 LILDTTKGKVVIKLRPDLAPKHVTRIKELARENFYDGVVFHRVIDGFMAQTGDPTG-TGA 68
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
++ +EAE FS H RG +S R ++PNSA S F I DAP L+ QY+VF
Sbjct: 69 GGSDKPDLEAE------FSAEPHKRGTVSAARTANPNSANSQFFICFEDAPWLNKQYSVF 122
Query: 151 GKVTKGDETLRKL-EGLPTR 169
G+V +G + + ++ +G P R
Sbjct: 123 GEVIEGMDNVDQIKKGEPVR 142
>gi|355576504|ref|ZP_09045759.1| hypothetical protein HMPREF1008_01736 [Olsenella sp. oral taxon 809
str. F0356]
gi|354816741|gb|EHF01256.1| hypothetical protein HMPREF1008_01736 [Olsenella sp. oral taxon 809
str. F0356]
Length = 246
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
+G IE + AP TV + L G Y+ F RV GF+ Q D G + +
Sbjct: 93 GFGSIELELNANAAPVTVSNFADLAGSGFYDGLTFHRVISGFMIQGGDPKGDGTGGSD-- 150
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+R++ E + G + + H RG++SM R SD +SA+S F I+ DA LDGQYA FGKVT
Sbjct: 151 RRIKGEFSANGVVNPIMHKRGVISMARSSDYDSASSQFFIVHEDAGSLDGQYAAFGKVTD 210
Query: 156 G 156
G
Sbjct: 211 G 211
>gi|86357733|ref|YP_469625.1| peptidyl prolyl cis-trans isomerase A signal peptide protein
[Rhizobium etli CFN 42]
gi|86281835|gb|ABC90898.1| peptidyl prolyl cis-trans isomerase A signal peptide protein
[Rhizobium etli CFN 42]
Length = 190
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDALAQS----ADHYLTIQLKNGPVVIQLMPDVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIDGFMAQTGDVKYGNIEKGFDASLAGTGSSDLPDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
DPNSA S F I+ D L+GQY V GKV G E + K++ R EG
Sbjct: 128 DPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK----RGEG 171
>gi|357977664|ref|ZP_09141635.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sphingomonas
sp. KC8]
Length = 155
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD+ P +AP V+ I +L R G Y+ F RV GF+AQ D P
Sbjct: 16 GDVVIDLRPDLAPGHVERIKELAREGFYDGVVFHRVIPGFMAQGGD-------PTGTGMG 68
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ + EF+ HVRG+ SM R +PNSA S F I DA LD QY V+G V +G
Sbjct: 69 GSKQPDLKAEFNAEPHVRGVCSMARSQNPNSANSQFFICFDDATFLDRQYTVWGVVREGM 128
Query: 158 ETLRKL-EGLPTRKEGIFV 175
E + L +G P R G +
Sbjct: 129 EHVDALPKGEPPRTPGKII 147
>gi|330822527|ref|XP_003291702.1| hypothetical protein DICPUDRAFT_156321 [Dictyostelium purpureum]
gi|325078109|gb|EGC31779.1| hypothetical protein DICPUDRAFT_156321 [Dictyostelium purpureum]
Length = 164
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 19 SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFV 78
S+ D Q VV QT+ GDI Y AP+ + + L + G YN F R+ K F+
Sbjct: 2 SNGNDEQW-KGDVVLQTSLGDIGLELYFDHAPKACKNFYDLAKRGYYNNTIFHRLIKDFM 60
Query: 79 AQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHV-RGILSMGRYSDPNSAASSFSIL 136
Q D G GR ++ E E T ++KH GILSM S N+ S F I
Sbjct: 61 IQGGDPTGTGRGGESIYGKKFEDEIT-----KELKHTGAGILSMAN-SGVNTNGSQFFIT 114
Query: 137 LGDAPHLDGQYAVFGKVTKGDETLRKLEGLPT 168
G AP LDG+Y +FG+V G + ++K+ L T
Sbjct: 115 FGPAPWLDGKYTIFGRVNTGMKIVQKMNALQT 146
>gi|304397800|ref|ZP_07379676.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Pantoea sp.
aB]
gi|308188394|ref|YP_003932525.1| peptidyl-prolyl cis-trans isomerase A [Pantoea vagans C9-1]
gi|372275726|ref|ZP_09511762.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pantoea sp.
SL1_M5]
gi|390436372|ref|ZP_10224910.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pantoea
agglomerans IG1]
gi|440759733|ref|ZP_20938860.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor [Pantoea
agglomerans 299R]
gi|304354511|gb|EFM18882.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Pantoea sp.
aB]
gi|308058904|gb|ADO11076.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pantoea vagans
C9-1]
gi|436426478|gb|ELP24188.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor [Pantoea
agglomerans 299R]
Length = 190
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 6 RIFLTLITLIG--TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLG 63
R ITL+ + S+Q G V+ T+ G+IE AP +V + V G
Sbjct: 4 RTLTAAITLLALSSVSAQALAAKGDTHVLLTTSAGNIELELNNQKAPVSVKNFVDYVNNG 63
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGR 122
YN F RV GF+ Q GG + M Q+ + + E + ++++RG +SM R
Sbjct: 64 FYNNTIFHRVIPGFMVQ----GGGFTTDM---QQKQTNAPIKNEADNGLRNLRGTISMAR 116
Query: 123 YSDPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-M 176
+D +SA S F + + D LD GQ YAVFGK+ KG + + K+ +PT+ G + +
Sbjct: 117 TADKDSATSQFFLNVADNAFLDHGQRDFGYAVFGKIVKGQDVVEKISQVPTKDVGPYQNV 176
Query: 177 PTERITIHSS 186
P++ + I S+
Sbjct: 177 PSKPVVILSA 186
>gi|163845846|ref|YP_001633890.1| peptidyl-prolyl isomerase [Chloroflexus aurantiacus J-10-fl]
gi|222523557|ref|YP_002568027.1| peptidyl-prolyl isomerase [Chloroflexus sp. Y-400-fl]
gi|163667135|gb|ABY33501.1| Peptidylprolyl isomerase [Chloroflexus aurantiacus J-10-fl]
gi|222447436|gb|ACM51702.1| Peptidylprolyl isomerase [Chloroflexus sp. Y-400-fl]
Length = 249
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 70/138 (50%), Gaps = 15/138 (10%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMN 93
T G+I P +APQTV++ L R YN + RV F+AQ D G G P
Sbjct: 101 TPRGEIVIELLPDIAPQTVNNFVFLARQNFYNGLTWHRVLPNFMAQGGDPRGDGTGGP-- 158
Query: 94 EVQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
T+ EF+D + GI++M R SDPNSA S F I AP L+ QY +FG
Sbjct: 159 -------GYTIPAEFTDKILFDQPGIVAMARSSDPNSAGSQFFITTAPAPRLNEQYTIFG 211
Query: 152 KVTKGDETLRKLEGLPTR 169
+V +G E ++G+P R
Sbjct: 212 RVIQGQEI---VDGIPLR 226
>gi|319407152|emb|CBI80790.1| peptidyl prolyl cis-trans isomerase [Bartonella sp. 1-1C]
Length = 201
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 5 IRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
I FLT + + S+ D +V GD+ P +AP+ V I KL G
Sbjct: 7 IFTFLTCFFYLFSFSAAADEH---NILVLSLKNGDVIIQLRPDLAPKHVARIKKLTEEGA 63
Query: 65 YNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRV----EAEKTVVGEFSDVKHVRGILS 119
YN F RV GF+AQ DV G+ ++ + + V + + EFS RG +
Sbjct: 64 YNNVVFHRVIPGFMAQTGDVKFGKKDSIDFDFKNVGKGGSSYSNLPAEFSKQPFKRGTVG 123
Query: 120 MGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
M R D NSA S F I DA L+GQY V G+V KG E + K++
Sbjct: 124 MARSQDLNSANSQFFICFNDATFLNGQYTVVGEVVKGMEVVDKIK 168
>gi|225023278|ref|ZP_03712470.1| hypothetical protein EIKCOROL_00130 [Eikenella corrodens ATCC
23834]
gi|224943923|gb|EEG25132.1| hypothetical protein EIKCOROL_00130 [Eikenella corrodens ATCC
23834]
Length = 191
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
RV+ +T+ G+IE + AP+TV++ R G YN F RV GF+ Q GG +
Sbjct: 26 RVLLETSQGNIELSLDETRAPKTVENFLAYARSGFYNGTIFHRVIPGFMIQ----GGGLT 81
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGD-------AP 141
A M E + + + E ++ +K+ R ++M R + P+SA S F I L D AP
Sbjct: 82 AQMAE--KAPIRRALDNEAANGLKNNRYTIAMARTAQPHSATSQFFINLKDNEFLNHTAP 139
Query: 142 HLDGQ-YAVFGKVTKGDETLRKLEGLPT 168
G YAVFGKVT G E + K+ G+PT
Sbjct: 140 TARGYGYAVFGKVTAGQEVVDKIAGIPT 167
>gi|386017462|ref|YP_005935760.1| peptidyl-prolyl cis-trans isomerase A precursor PpiA [Pantoea
ananatis AJ13355]
gi|327395542|dbj|BAK12964.1| peptidyl-prolyl cis-trans isomerase A precursor PpiA [Pantoea
ananatis AJ13355]
Length = 209
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +V + V G YN F RV GF+ Q G
Sbjct: 46 GDTHVLLTTSAGNIELELNNQKAPVSVKNFVDYVNSGFYNNTIFHRVIPGFMIQ-----G 100
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD- 144
G A +E+Q+ + + E + ++++RG +SM R +D +SA S F + + D LD
Sbjct: 101 GGFA--SEMQQKQTNAPIKNEADNGLRNLRGTISMARTADKDSATSQFFLNVADNAFLDH 158
Query: 145 GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGK+ KG + + K+ +PT+ G + +PT+ + I S+
Sbjct: 159 GQRDFGYAVFGKIVKGQDVVDKISQVPTKDVGPYQNVPTKPVVILSA 205
>gi|350638189|gb|EHA26545.1| hypothetical protein ASPNIDRAFT_51914 [Aspergillus niger ATCC 1015]
Length = 629
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A++ + +LG++ + T GDI YPS AP+ V++ R G YN F RV + F
Sbjct: 468 AAAPKAAELGTS-AILHTTMGDIHLRLYPSAAPKAVENFTTHARNGYYNNTIFHRVIRKF 526
Query: 78 VAQ----VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASS 132
+ Q + D GG S E + EFS +KH + LSM + PN+ S
Sbjct: 527 MIQGGDPLGDGTGGESIWGGEFE---------DEFSSLKHDKAYTLSMAN-AGPNTNGSQ 576
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
F I P LDG++ VFG+ +G + + K+E T KE
Sbjct: 577 FFITTEKTPWLDGKHTVFGRAVQGLDVVHKIENTKTFKE 615
>gi|126728746|ref|ZP_01744561.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Sagittula
stellata E-37]
gi|126710676|gb|EBA09727.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Sagittula
stellata E-37]
Length = 172
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G + P VAP+ V+ + +L R G Y+ F RV GF+AQ DV G
Sbjct: 14 ILMELKGGTVVIALMPDVAPKHVERMKELARAGAYDNVCFHRVIDGFMAQTGDVANGNME 73
Query: 91 PMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
++R + + EFS + H RG L R +PNSA + F I D L+GQ
Sbjct: 74 KDFNLRRAGTGGSELPDLPAEFSRIPHARGSLGAARSQNPNSANAQFFINFKDNDFLNGQ 133
Query: 147 YAVFGKVTKGDE 158
Y V+G+V +G E
Sbjct: 134 YTVYGQVIEGME 145
>gi|407785785|ref|ZP_11132932.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Celeribacter
baekdonensis B30]
gi|407202735|gb|EKE72725.1| Peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Celeribacter
baekdonensis B30]
Length = 168
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ G++ P +AP+ D + +L R G Y+ F RV GF+AQ DV G
Sbjct: 11 IILTLENGEVVIELMPEIAPKHCDRMKELARSGAYDGVVFHRVIDGFMAQTGDVQFGNKT 70
Query: 91 PMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
E +R + V EFS + H RG + R +PNSA S F I D L+ Q
Sbjct: 71 KDYEPRRAGTGASDLPNVEAEFSGIPHDRGTIGAARAQNPNSANSQFFINFSDNHFLNRQ 130
Query: 147 YAVFGKVTKGDETLRKL-EGLPTRKEGIFV 175
Y V+G+V G + + K+ G P R + V
Sbjct: 131 YTVYGRVISGMDAVDKITRGEPPRDPDVMV 160
>gi|148546591|ref|YP_001266693.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Pseudomonas
putida F1]
gi|148510649|gb|ABQ77509.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Pseudomonas
putida F1]
Length = 185
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 13/169 (7%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ T++G +E AP + + + V G YN F RV GF+ Q GG
Sbjct: 24 TPHVLLDTSFGQVEIELNAEKAPLSTKNFLQYVDSGFYNNTIFHRVIPGFMVQ----GGG 79
Query: 88 RSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGD----APH 142
+ M VQ+ + E S+ +++ RG LSM R S+PNSA S F I + D P
Sbjct: 80 FTDQM--VQK-NTNDPIKNEASNGLQNTRGTLSMARTSNPNSATSQFFINVADNDFLNPG 136
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
D YAVFGKVTKG + + ++ PT K+G+ +P + + I S+ D
Sbjct: 137 RDAGYAVFGKVTKGMDVVDQIVNSPTTIKKGMRDVPADPVYIKSAKRID 185
>gi|410923561|ref|XP_003975250.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like
[Takifugu rubripes]
Length = 176
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ G+I+ + P++ ++ L G YN F R KGF+ Q D G G+
Sbjct: 18 VTLHTDLGEIKIELFCERTPKSCENFLALCASGFYNDCTFHRNIKGFMVQTGDPTGSGKG 77
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
++ E EFS+ +KH VRG++SM + PN+ S F I PHLD +Y
Sbjct: 78 GTSIWGRKFE------DEFSEHLKHNVRGVVSMAN-NGPNTNGSQFFITYAKQPHLDMKY 130
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSS 186
FGKV G ETL ++E LP ++ + RI TIH++
Sbjct: 131 TAFGKVIDGLETLDEIEKLPVNEKTFRPLTETRIKDVTIHAN 172
>gi|104782956|ref|YP_609454.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas entomophila L48]
gi|95111943|emb|CAK16668.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pseudomonas
entomophila L48]
Length = 185
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNE 94
T++G IE AP + + + V G YN F RV GF+ Q GG + M
Sbjct: 31 TSFGKIEIELNAEKAPISTKNFLEYVDSGFYNNTIFHRVIPGFMVQG----GGFTDQM-- 84
Query: 95 VQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGD----APHLDGQYAV 149
VQ+ + + E S+ +++ RG LSM R SDPNSA S F I + D P D YAV
Sbjct: 85 VQK-NTKDPIRNEASNGLQNTRGTLSMARTSDPNSATSQFFINVADNDFLNPGRDRGYAV 143
Query: 150 FGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
FGKVTKG E + ++ PT K+G+ +P + + I S+ D
Sbjct: 144 FGKVTKGMEVVDQIVNSPTTVKKGMRDVPADPVYIKSAKRID 185
>gi|52345878|ref|NP_001004983.1| peptidylprolyl isomerase (cyclophilin)-like 3 [Xenopus (Silurana)
tropicalis]
gi|49523292|gb|AAH75537.1| peptidylprolyl isomerase (cyclophilin)-like 3 [Xenopus (Silurana)
tropicalis]
gi|89268872|emb|CAJ81475.1| peptidylprolyl isomerase (cyclophilin)-like 3 [Xenopus (Silurana)
tropicalis]
Length = 161
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ G+I+ + AP+ ++ L Y F R KGF+ Q D G G+
Sbjct: 3 VTLHTDLGEIKIELFCERAPKASENFLALCASNYYTGCLFHRNIKGFMVQTGDPTGTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + EF +KH VRG++SM + PN+ AS F I G PHLD +Y
Sbjct: 63 GQSIWGRKFEDEYS---EF--LKHSVRGVVSMAN-NGPNTNASQFFITYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSS 186
VFGKV G +TL +LE LP ++ + RI TIH++
Sbjct: 117 VFGKVIDGLDTLDELEKLPVHEKSFRPLTEVRIKDATIHAN 157
>gi|389736472|ref|ZP_10190020.1| peptidyl-prolyl cis-trans isomerase, partial [Rhodanobacter sp.
115]
gi|388439306|gb|EIL95902.1| peptidyl-prolyl cis-trans isomerase, partial [Rhodanobacter sp.
115]
Length = 222
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 24/182 (13%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
TA DPQ V+ T+ GDI +P AP++V + + VR G Y F R G
Sbjct: 25 TAPPAVDPQ-----VLLHTSQGDITLELFPDKAPKSVANFLRYVREGFYAGTVFHRSIPG 79
Query: 77 FVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSI 135
++ Q GG E+Q + E + + ++RG +++ R +DPNS S F +
Sbjct: 80 YLVQ-----GGLY--TRELQPRRTHSPIASEADNGLSNLRGTVAVARGADPNSGTSQFFV 132
Query: 136 LLGDAPHLD---------GQYAVFGKVTKGDETLRKLEGLPTRKEGIFV--MPTERITIH 184
L D LD YAVFGKV KG + + K+ LPTR G F +P + I
Sbjct: 133 NLVDNRRLDYAGNQSGLTWGYAVFGKVVKGMDVVDKIAALPTRALGPFAADVPNPLVVIE 192
Query: 185 SS 186
S+
Sbjct: 193 SA 194
>gi|423110703|ref|ZP_17098398.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella oxytoca 10-5243]
gi|376378767|gb|EHS91525.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella oxytoca 10-5243]
Length = 189
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +VD+ K V G YN F RV GF+ Q G
Sbjct: 26 GDPHVLLTTSAGNIELELNSQKAPISVDNFLKYVNSGFYNNTTFHRVIPGFMVQ-----G 80
Query: 87 GRSAPMNE-VQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
G NE +Q+ + + E + ++++RG ++M R +D +SA S F I + D LD
Sbjct: 81 GG---FNEQMQQKQPNPPIKNEADNGLRNMRGTIAMARTADQDSATSQFFINIADNAFLD 137
Query: 145 -GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGKV KG + K+ +PT G + +P++ I I S+
Sbjct: 138 HGQRDFGYAVFGKVVKGMDVADKISQVPTHNVGPYQNVPSKPIVILSA 185
>gi|407781811|ref|ZP_11129028.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Oceanibaculum
indicum P24]
gi|407207437|gb|EKE77374.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Oceanibaculum
indicum P24]
Length = 151
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 37 YGDIEFG-----FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAP 91
Y D+E+G P +AP+ V I +LVR G Y+ F RV +GF+AQ D G
Sbjct: 6 YLDLEYGRVVIELKPDLAPKHVARIKELVRAGFYDGIVFHRVIEGFMAQTGDPTG----- 60
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
R + K + EF+ RG + M R +P+S S F I AP L+GQY V+G
Sbjct: 61 ---TGRGGSGKKIPAEFNSAPFERGTVGMARSQNPDSGDSQFFICFKPAPFLNGQYTVWG 117
Query: 152 KVTKGDETLRKLE 164
+V +G E + K++
Sbjct: 118 QVVEGMEFVDKIK 130
>gi|296445820|ref|ZP_06887772.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Methylosinus
trichosporium OB3b]
gi|296256648|gb|EFH03723.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Methylosinus
trichosporium OB3b]
Length = 150
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 33 FQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPM 92
+T GD+ P +AP V HI KLV G Y+ F RV +GF+AQ P
Sbjct: 9 LETTQGDVVIKLRPDLAPGHVAHIKKLVSEGFYDGIVFHRVIEGFMAQTG-------CPH 61
Query: 93 NEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
+ EF+ HVRG SM R P+SA S F I DA LD QY V+G+
Sbjct: 62 GTGTGGSKYPDLKAEFNTAPHVRGTCSMARAQHPDSANSQFFICFTDARFLDKQYTVWGE 121
Query: 153 VTKGDETLRKLE-GLPTR 169
V G E + K++ G P +
Sbjct: 122 VISGMENVDKIKRGEPVK 139
>gi|116252156|ref|YP_767994.1| peptidyl-prolyl cis-trans isomerase (cyclophilin) [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256804|emb|CAK07894.1| putative peptidyl-prolyl cis-trans isomerase (cyclophilin)
[Rhizobium leguminosarum bv. viciae 3841]
Length = 190
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQSADHY----LTIQLKDGPVVIQLMPEVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIDGFMAQTGDVKYGNMEKGFDASLAGTGSSDMPDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
DPNSA S F I+ D L+GQY V GKV G E + K++
Sbjct: 128 DPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK 167
>gi|429769255|ref|ZP_19301371.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Brevundimonas diminuta 470-4]
gi|429187602|gb|EKY28513.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Brevundimonas diminuta 470-4]
Length = 154
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 47 SVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVV 105
+AP V I L + G Y+ F RV GF+AQ D G G S ++ +
Sbjct: 27 DLAPNHVKQITDLAKEGFYDGVVFHRVIPGFMAQGGDPTGTGTSG--------SSKPNLK 78
Query: 106 GEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL-E 164
EFS HVRG+ SM R ++P+SA S F I DA LDGQY V+G+V +G E + L +
Sbjct: 79 QEFSKEPHVRGVCSMARTANPDSANSQFFICFDDARFLDGQYTVWGEVIEGMEHVDALPK 138
Query: 165 GLPTRKEGIFVMPT 178
G P R G V T
Sbjct: 139 GEPPRAPGKIVKAT 152
>gi|229829328|ref|ZP_04455397.1| hypothetical protein GCWU000342_01415 [Shuttleworthia satelles DSM
14600]
gi|229792491|gb|EEP28605.1| hypothetical protein GCWU000342_01415 [Shuttleworthia satelles DSM
14600]
Length = 173
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 61/119 (51%), Gaps = 14/119 (11%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103
YP +AP TV++ L++ G Y+ F RV GF+ Q D
Sbjct: 21 LYPQIAPNTVNNFISLIQKGYYDGVIFHRVIPGFMIQGGDPQ--------GTGTGGPGYC 72
Query: 104 VVGEFS------DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ GEFS D+KH +G+LSM R P+SA S F I+ +PHLDG YA FG+V +G
Sbjct: 73 IPGEFSHNGFSNDLKHSKGVLSMARTMVPDSAGSQFFIMHETSPHLDGDYAAFGQVIEG 131
>gi|319898827|ref|YP_004158920.1| peptidyl prolyl cis-trans isomerase [Bartonella clarridgeiae 73]
gi|319402791|emb|CBI76340.1| peptidyl prolyl cis-trans isomerase [Bartonella clarridgeiae 73]
Length = 196
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 82/171 (47%), Gaps = 10/171 (5%)
Query: 1 MLNVIRIF--LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFK 58
M+ RIF LT I + ++ D +V GD+ P +AP+ V I K
Sbjct: 1 MIVFFRIFNILTCIFCFFSFNAAADDH---NILVLSLKNGDVIIQLRPDLAPKHVAQIKK 57
Query: 59 LVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRV----EAEKTVVGEFSDVKH 113
L G YN F RV GF+AQ DV G+ ++ +++ V + EFS+
Sbjct: 58 LTEEGAYNNVVFHRVIPGFMAQTGDVKFGKKDSVDFDLKNVGKGGSNYSNLPAEFSEQPF 117
Query: 114 VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
RG + M R D NSA S F I DA L+GQY V G+V KG E + K++
Sbjct: 118 KRGTVGMARSQDLNSANSQFFICFDDATFLNGQYTVVGEVVKGMEVVDKIK 168
>gi|268592229|ref|ZP_06126450.1| peptidylprolyl isomerase A [Providencia rettgeri DSM 1131]
gi|291312277|gb|EFE52730.1| peptidylprolyl isomerase A [Providencia rettgeri DSM 1131]
Length = 190
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
RIF+ L+ + ++S G V T+ GDIE AP T ++ + V G Y
Sbjct: 4 RIFVPLLAVCAMSASSLALSAGETYVKLVTSAGDIELELNSKKAPVTTENFVQYVNEGYY 63
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYS 124
N F RV GF+ Q GG + ++Q+ + + E + ++++RG +SM R +
Sbjct: 64 NGTTFHRVIPGFMIQ----GGGFN---KDLQQKQTRAPIKNEADNGLRNLRGTISMARTA 116
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
+ +SA S F I + D LD GQ YAVFGKV KG + K+ + T G + +P
Sbjct: 117 NKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISKVKTENVGPYQNVPV 176
Query: 179 ERITIHSS 186
E ITI S+
Sbjct: 177 EPITIISA 184
>gi|83943195|ref|ZP_00955655.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Sulfitobacter sp. EE-36]
gi|83846203|gb|EAP84080.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Sulfitobacter sp. EE-36]
Length = 168
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G + P VAP+ V+ I +L R G Y+ F RV +GF+AQ DV G
Sbjct: 11 ILMELKGGTVTIQLLPDVAPKHVERIKELARAGKYDNVAFHRVIEGFMAQTGDVANGN-- 68
Query: 91 PMNEVQRVEAEKT-------VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
M + + A T + EFS V H RG + R ++P+SA S F I D L
Sbjct: 69 -MEDNFNLRAAGTGGSDMPNLPAEFSKVPHARGSIGAARSANPDSANSQFFINFKDNDFL 127
Query: 144 DGQYAVFGKVTKGDE 158
+GQY V+G+V G E
Sbjct: 128 NGQYTVYGQVISGME 142
>gi|221505654|gb|EEE31299.1| cyclophilin, putative [Toxoplasma gondii VEG]
Length = 165
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +TN GD++ Y AP+T + L YN F R KGF Q D G
Sbjct: 3 VTIKTNLGDLKAELYCQQAPKTCKNFLALCASDYYNGTRFHRNIKGFAIQGGDPTGTGKG 62
Query: 91 PMNEVQRVEAEKTVVGEFSD-----VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
E G F D +KH RGILSM PN+ S F I PHL+
Sbjct: 63 ---------GESIYGGLFEDEFVSSLKHDRRGILSMANQGKPNTNGSQFFITYCRQPHLN 113
Query: 145 GQYAVFGKVTKGDETLRKLE----GLPTRKEGIFVMPTERITIHSS 186
G Y+VFG++ G +TL K+E G R E ++ E++ IH++
Sbjct: 114 GVYSVFGRLIDGMDTLDKMEREPVGRKNRPENDIII--EQVIIHAN 157
>gi|197286652|ref|YP_002152524.1| peptidyl-prolyl cis-trans isomerase A [Proteus mirabilis HI4320]
gi|227355157|ref|ZP_03839568.1| peptidyl-prolyl cis-trans isomerase A [Proteus mirabilis ATCC
29906]
gi|425069611|ref|ZP_18472726.1| peptidyl-prolyl cis-trans isomerase A [Proteus mirabilis WGLW6]
gi|425071069|ref|ZP_18474175.1| peptidyl-prolyl cis-trans isomerase A [Proteus mirabilis WGLW4]
gi|194684139|emb|CAR45566.1| peptidyl-prolyl cis-trans isomerase A [Proteus mirabilis HI4320]
gi|227164944|gb|EEI49791.1| peptidyl-prolyl cis-trans isomerase A [Proteus mirabilis ATCC
29906]
gi|404597037|gb|EKA97544.1| peptidyl-prolyl cis-trans isomerase A [Proteus mirabilis WGLW6]
gi|404599894|gb|EKB00347.1| peptidyl-prolyl cis-trans isomerase A [Proteus mirabilis WGLW4]
Length = 190
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 6 RIFLTLITLIG-TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
R F+TL+T T +S G V T+ G+IE AP T + + V G
Sbjct: 4 RFFVTLVTACTLTTTSLAMAATGETFVKLVTSEGNIELSLDNKKAPITTKNFIQYVEDGY 63
Query: 65 YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYS 124
YN F RV GF+ Q GG +A + + Q E K + +++++G ++M R S
Sbjct: 64 YNGTTFHRVIPGFMIQ----GGGFTADLQQKQTREPIKNEAD--NGLRNLKGTIAMARTS 117
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
D +SA S F I + D LD GQ YAVFGKV KG + + K+ + TR G + +P
Sbjct: 118 DKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVVDKISQVQTRNIGPYQNVPV 177
Query: 179 ERITIHSS 186
+ +TI S+
Sbjct: 178 KTVTILSA 185
>gi|395782072|ref|ZP_10462480.1| hypothetical protein MCY_00877 [Bartonella rattimassiliensis 15908]
gi|395419804|gb|EJF86094.1| hypothetical protein MCY_00877 [Bartonella rattimassiliensis 15908]
Length = 197
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 9/187 (4%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
+L + F + L +S D L ++ GD+ P +AP+ V I KL
Sbjct: 8 VLICVFCFFSCHALADNFNSASDANL----LILSLKNGDVIIRLRPDLAPKHVAQIKKLT 63
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRV----EAEKTVVGEFSDVKHVR 115
G Y+ F RV GF+AQ DV G+ ++ +++RV + EFS R
Sbjct: 64 ENGAYDDVVFHRVIPGFMAQTGDVKFGKKGSVDFDLKRVGMGGSNYSNIPAEFSKQPFKR 123
Query: 116 GILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFV 175
G + M R D +SA S F I DA L+GQY V G+V +G + + K++ T G
Sbjct: 124 GTVGMARSKDLDSANSQFFICFDDAKFLNGQYTVVGEVIEGMDVVDKIKKGTTSNNGAVK 183
Query: 176 MPTERIT 182
P IT
Sbjct: 184 NPDVIIT 190
>gi|340711065|ref|XP_003394102.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like [Bombus
terrestris]
Length = 161
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV-GGRS 89
V T+ GDI+ + + P+T ++ L Y+ F R KGF+ Q D G+
Sbjct: 3 VTLHTDVGDIKIELFCELCPKTCENFLALCASDYYDNCLFHRNIKGFIVQTGDPTHTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E ++KH RG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GTSIWNRKFEDEFK-----EELKHNARGLISMAN-NGPNTNGSQFFITYGPQPHLDLKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSS 186
+FGKV G ETL +LE LP + + RI TIH++
Sbjct: 117 LFGKVIDGLETLEQLEKLPVNPKNYRPLTETRINSVTIHAN 157
>gi|260576740|ref|ZP_05844725.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhodobacter
sp. SW2]
gi|259020992|gb|EEW24303.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhodobacter
sp. SW2]
Length = 169
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ GD+ VAP+ + + L R G Y+ F RV GF+AQ DV G +
Sbjct: 11 IIITLKDGDVVIELLADVAPKHSERMKALARSGAYDNVVFHRVIDGFMAQTGDVENGNAE 70
Query: 91 PMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
++R + + EFS + H RG L R S+PNSA S F I D L+GQ
Sbjct: 71 KGFNLRRAGTGGSNLPDLPAEFSKLPHARGTLGAARSSNPNSANSQFFINFKDNDFLNGQ 130
Query: 147 YAVFGKVTKGDETLRKL 163
Y V+G+V G E + K+
Sbjct: 131 YTVYGRVISGMEHVDKI 147
>gi|399992930|ref|YP_006573170.1| peptidyl-prolyl cis-trans isomerases (cyclophilin) [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|400754605|ref|YP_006562973.1| peptidyl-prolyl cis-trans isomerase [Phaeobacter gallaeciensis
2.10]
gi|398653758|gb|AFO87728.1| putative peptidyl-prolyl cis-trans isomerase [Phaeobacter
gallaeciensis 2.10]
gi|398657485|gb|AFO91451.1| putative peptidyl-prolyl cis-trans isomerases (cyclophilin)
[Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
Length = 183
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VGG--RSAP 91
G I+ + VAP+ V+ I L G Y+ F RV +GF+AQ DV +GG R A
Sbjct: 31 GTIKIDLFEDVAPKHVEQITALAAEGKYDGVVFHRVIEGFMAQTGDVEFGKLGGDMRRAG 90
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFG 151
M +R + + EFSD++ RG++ M R DP+SA S F I+ L+GQY V G
Sbjct: 91 MGGSERSD----LPAEFSDLEFDRGVVGMARSQDPDSANSQFFIMFAPGHFLNGQYTVVG 146
Query: 152 KVTKG 156
KVT+G
Sbjct: 147 KVTEG 151
>gi|395527609|ref|XP_003765936.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 2-like
[Sarcophilus harrisii]
Length = 342
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P++ ++ L YN F R KGF+ Q D G G+
Sbjct: 50 VTLHTDVGDIKIEVFCERTPKSCENFLALCASNYYNGCIFHRNIKGFMIQTGDPTGSGKG 109
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
N + + E E+S+ +KH VRG++SM + PN+ S F I G PHLD +Y
Sbjct: 110 G--NSIWGRKFED----EYSEYLKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKY 162
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMP---TERITIHSSYYYDTEME 194
VFGKV G ETL +LE LP ++ + + ITIH++ + ++
Sbjct: 163 TVFGKVIDGLETLDELEKLPVNEKTFRPLNDVHIKDITIHANPFAPVSLQ 212
>gi|375309086|ref|ZP_09774367.1| peptidyl-prolyl cis-trans isomerase B [Paenibacillus sp. Aloe-11]
gi|375078395|gb|EHS56622.1| peptidyl-prolyl cis-trans isomerase B [Paenibacillus sp. Aloe-11]
Length = 144
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G +E F+P AP TV + KL G YN F RV GFVAQ +G G P
Sbjct: 10 NGGIVEIDFFPEEAPNTVANFEKLANSGFYNGLSFHRVIPGFVAQGGCPIGNGTGGPGYT 69
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
+ A T KH +G+LSM ++ N+ S F I PHLDG + VFGKVT
Sbjct: 70 IDCETATNT-------TKHAKGVLSM-AHAGRNTGGSQFFICYAPQPHLDGVHTVFGKVT 121
Query: 155 KGDE 158
KG E
Sbjct: 122 KGME 125
>gi|92117314|ref|YP_577043.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Nitrobacter
hamburgensis X14]
gi|91800208|gb|ABE62583.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Nitrobacter
hamburgensis X14]
Length = 147
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ
Sbjct: 1 MILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTG-------C 53
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P K + EF++ HVRG SM R P+SA S F I +A LD QY V+
Sbjct: 54 PQGTGTGGSGTK-LKAEFNNEPHVRGTASMARAQSPDSADSQFFICFDEASFLDRQYTVW 112
Query: 151 GKVTKGDETLRKLE 164
GKVT+G E + K++
Sbjct: 113 GKVTEGMENVDKIK 126
>gi|407798741|ref|ZP_11145644.1| putative peptidyl-prolyl cis-trans isomerase [Oceaniovalibus
guishaninsula JLT2003]
gi|407059089|gb|EKE45022.1| putative peptidyl-prolyl cis-trans isomerase [Oceaniovalibus
guishaninsula JLT2003]
Length = 168
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G + P VAP+ V+ + L R G Y+ F RV GF+AQ DV G +
Sbjct: 11 IIIELKDGPVTVELLPDVAPKHVERMKTLARAGAYDNVVFHRVIDGFMAQTGDVRNGNAE 70
Query: 91 PMNEVQRV----EAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
++ + EFS + H RG + R S PNSA S F I D L+GQ
Sbjct: 71 KDFNIRSAGTGGSDHPDLPAEFSKLPHDRGTIGAARSSSPNSANSQFFINFADNNFLNGQ 130
Query: 147 YAVFGKVTKGDETLRKL 163
Y V+G+V G E + K+
Sbjct: 131 YTVYGRVIDGMEHVDKI 147
>gi|378726008|gb|EHY52467.1| peptidylprolyl isomerase [Exophiala dermatitidis NIH/UT8656]
Length = 617
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 14 LIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRV 73
+IG +E V T YGDI +P AP+TV++ R G YN F RV
Sbjct: 451 IIGGKKKEEKQAQTGTSAVLHTTYGDIHIRLFPDKAPKTVENFVTHARNGYYNNTIFHRV 510
Query: 74 DKGFVAQ----VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSA 129
+ F+ Q + D GG S E + EFSD+KH + + PN+
Sbjct: 511 IRKFMIQGGDPLGDGTGGESIWGKEFE---------DEFSDLKHDKPYTVSMANAGPNTN 561
Query: 130 ASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
S F I P LDG++ +FG+ +G + + ++E KE
Sbjct: 562 GSQFFITTEKTPFLDGKHTIFGRAYQGLDVIHQIENTKVHKE 603
>gi|409045775|gb|EKM55255.1| hypothetical protein PHACADRAFT_255733 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
VV +T+ GDI+ Y AP+T ++ +L + G YN+ F R+ F+ Q D G GRS
Sbjct: 4 VVLETSLGDIQLELYWDHAPRTCENFAELAKRGYYNSVIFHRIIPDFMVQGGDPTGTGRS 63
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
Q+ E E F+ GIL+M S PN+ S F + L P+LDG++ +
Sbjct: 64 GTSIYGQKFEDEIHPELRFTGA----GILAMAN-SGPNTNGSQFFLTLAPTPYLDGKHTI 118
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSS 186
FG+V+ G L++L + T + P E + IH +
Sbjct: 119 FGRVSSGMRVLQRLGAVATDAQD---RPREDVKIHKA 152
>gi|308069560|ref|YP_003871165.1| peptidyl-prolyl cis-trans isomerase B [Paenibacillus polymyxa E681]
gi|310642617|ref|YP_003947375.1| peptidyl-prolyl cis-trans isomerase b [Paenibacillus polymyxa SC2]
gi|386041677|ref|YP_005960631.1| peptidyl-prolyl cis-trans isomerase B [Paenibacillus polymyxa M1]
gi|305858839|gb|ADM70627.1| Peptidyl-prolyl cis-trans isomerase B (PPIase B) (Rotamase B)
[Paenibacillus polymyxa E681]
gi|309247567|gb|ADO57134.1| Peptidyl-prolyl cis-trans isomerase B [Paenibacillus polymyxa SC2]
gi|343097715|emb|CCC85924.1| peptidyl-prolyl cis-trans isomerase B [Paenibacillus polymyxa M1]
Length = 144
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G +E F+P AP TV + KL G YN F RV GFVAQ +G G P
Sbjct: 10 NGGIVEIDFFPEEAPNTVANFEKLANSGYYNGLSFHRVIPGFVAQGGCPIGNGTGGPGYT 69
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
+ A T KH +G+LSM ++ N+ S F I PHLDG + VFGKVT
Sbjct: 70 IDCETATNT-------TKHAKGVLSM-AHAGRNTGGSQFFICYAPQPHLDGVHTVFGKVT 121
Query: 155 KGDE 158
KG E
Sbjct: 122 KGME 125
>gi|384218715|ref|YP_005609881.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium japonicum USDA
6]
gi|354957614|dbj|BAL10293.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium japonicum USDA
6]
Length = 191
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 7 IFLTLITLIGTASSQEDPQLGSAR-VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
IF L + + + Q L A +V T G I +APQ + I +L R G Y
Sbjct: 11 IFAALFSAVPAVAQQLPANLDKANAIVIDTTKGRIVIKLRTDIAPQHAERIKQLAREGFY 70
Query: 66 NTNHFFRVDKGFVAQVAD-----VVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSM 120
N F RV GF+AQ D GG P + EFS V RGI+ M
Sbjct: 71 NNVPFHRVMDGFMAQTGDGEKFNGTGGSKYP-----------NLKQEFSKVHFARGIVGM 119
Query: 121 GRYSDP-NSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTE 179
R D +SA S F I+ D LD QY V G+V +G + + KL+ P G V +
Sbjct: 120 ARRGDSVDSANSQFFIMFADGGSLDNQYTVIGEVVQGMDVVDKLKKAPPGSAGGAVTDPD 179
Query: 180 RI 181
++
Sbjct: 180 KM 181
>gi|365127987|ref|ZP_09340335.1| hypothetical protein HMPREF1032_02099 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363623566|gb|EHL74677.1| hypothetical protein HMPREF1032_02099 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 157
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 49 APQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG---RSAPMNEVQRVEAEKTVV 105
AP TV++ KLV+ G Y+ F R+ GF+ Q GG + ++ E
Sbjct: 21 APITVENFTKLVKQGFYDGLTFHRIIPGFMIQ-----GGCPEGTGMGGPGYGIKGEFAAN 75
Query: 106 GEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEG 165
G + ++H RG++SM R PNSA S F I+ DAPHLDG YA FG V +G + + ++
Sbjct: 76 GVENPIRHTRGVISMARSQMPNSAGSQFFIMHADAPHLDGSYAAFGHVVEGMDVVDEIAS 135
Query: 166 LPT 168
+ T
Sbjct: 136 VAT 138
>gi|340521973|gb|EGR52206.1| predicted protein [Trichoderma reesei QM6a]
Length = 626
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ---- 80
+ G+A V T YGDI +P AP+ V++ + G YN F RV + F+ Q
Sbjct: 472 ETGTA-AVLHTTYGDIHIRLFPDAAPKAVENFVTHAKRGYYNNTIFHRVIRKFMIQGGDP 530
Query: 81 VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
+ D GG S + + EFS +KH + + PN+ AS F I
Sbjct: 531 LGDGTGGESIWGRDFE---------DEFSSLKHDKPYTVSMANAGPNTNASQFFITTEKT 581
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
P LDG++ +FG+ T+G + + K+E T KE P E I I
Sbjct: 582 PWLDGKHTIFGRATQGLDVIHKIENTRTHKE----KPEEDIKI 620
>gi|299133971|ref|ZP_07027165.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Afipia sp.
1NLS2]
gi|298591807|gb|EFI52008.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Afipia sp.
1NLS2]
Length = 154
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ T G++ P +AP V I +LVR G Y+ F RV GF+AQ G +
Sbjct: 8 LILDTTQGEVIIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGCPHG--TG 65
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
Q+++AE F+ HVRG +SM R ++P+S S F I DA LD QY V+
Sbjct: 66 TGGSGQKLKAE------FNAEPHVRGTVSMARAANPDSGDSQFFICFDDARFLDNQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKVT G E + K++
Sbjct: 120 GKVTSGMENVDKIK 133
>gi|375257715|ref|YP_005016885.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella oxytoca KCTC
1686]
gi|397660330|ref|YP_006501032.1| peptidyl-prolyl cis-trans isomerase ppiA [Klebsiella oxytoca E718]
gi|402845476|ref|ZP_10893814.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella sp. OBRC7]
gi|423105208|ref|ZP_17092910.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella oxytoca 10-5242]
gi|365907193|gb|AEX02646.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Klebsiella
oxytoca KCTC 1686]
gi|376381974|gb|EHS94710.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella oxytoca 10-5242]
gi|394348373|gb|AFN34494.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor [Klebsiella
oxytoca E718]
gi|402271173|gb|EJU20424.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella sp. OBRC7]
Length = 189
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +VD+ K V G YN F RV GF+ Q G
Sbjct: 26 GDPHVLLTTSAGNIELELNSQKAPISVDNFLKYVNSGFYNNTTFHRVIPGFMVQ-----G 80
Query: 87 GRSAPMNE-VQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
G NE +Q+ + + E + +++ RG ++M R +D +SA S F I + D LD
Sbjct: 81 GG---FNEQMQQKQPNPPIKNEADNGLRNTRGTIAMARTADQDSATSQFFINIADNAFLD 137
Query: 145 -GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGKV KG + K+ +PT G + +P++ I I S+
Sbjct: 138 HGQRDFGYAVFGKVVKGMDVADKISQVPTHNVGPYQNVPSKPIVILSA 185
>gi|261823269|ref|YP_003261375.1| peptidyl-prolyl cis-trans isomerase A [Pectobacterium wasabiae
WPP163]
gi|261607282|gb|ACX89768.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Pectobacterium wasabiae WPP163]
gi|385873732|gb|AFI92252.1| Peptidyl-prolyl cis-trans isomerase [Pectobacterium sp. SCC3193]
Length = 189
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G+ V+ T+ G+IE AP +V + + V G YN F RV GF+ Q G
Sbjct: 26 GTTHVLLTTSAGNIELSLDNQKAPVSVKNFVEYVNNGFYNGTTFHRVIPGFMVQ----GG 81
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
G S M++ +A + +D +++ RG ++M R +D +SA S F I + D LD
Sbjct: 82 GFSGEMSQ----KATNAPIKNEADNGLRNQRGTIAMARTADKDSATSQFFINIADNAFLD 137
Query: 145 -GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGKV KG E + K+ +PT+ G + +PT I I S+
Sbjct: 138 HGQRDFGYAVFGKVVKGMEVVDKISQVPTKNVGPYQNVPTTPIVIQSA 185
>gi|422006553|ref|ZP_16353542.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Providencia
rettgeri Dmel1]
gi|414098769|gb|EKT60414.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Providencia
rettgeri Dmel1]
Length = 190
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
RIF+ L+ + ++S G V T+ GDIE AP T ++ + V G Y
Sbjct: 4 RIFVPLLAICAMSASSLALSAGETYVKLVTSAGDIELELNSKKAPVTTENFVQYVNEGYY 63
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYS 124
N F RV GF+ Q GG + ++Q+ + + E + ++++RG +SM R +
Sbjct: 64 NGTTFHRVIPGFMIQ----GGGFN---KDLQQKQTRAPIKNEADNGLRNLRGTISMARTA 116
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
+ +SA S F I + D LD GQ YAVFGKV KG + K+ + T G + +P
Sbjct: 117 NKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISKVKTENVGPYQNVPV 176
Query: 179 ERITIHSS 186
E +TI S+
Sbjct: 177 EPVTIISA 184
>gi|334347111|ref|XP_001370426.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like
[Monodelphis domestica]
Length = 317
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 5 IRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
R+ LT +G + S V T+ GDI+ + P++ ++ L
Sbjct: 135 FRLLLTCFRCLGRKRKSALKRCYS--VTLHTDVGDIKIEVFCERTPKSCENFLALCASNY 192
Query: 65 YNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMG 121
YN F R KGF+ Q D G G+ N + + E E+S+ +KH VRG++SM
Sbjct: 193 YNGCIFHRNIKGFMVQTGDPTGSGKGG--NSIWGRKFED----EYSEYLKHSVRGVVSMA 246
Query: 122 RYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP---T 178
+ PN+ S F I G PHLD +Y VFGKV G ETL +LE LP ++ +
Sbjct: 247 N-NGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTFRPLNDVHI 305
Query: 179 ERITIHSSYY 188
+ ITIH++ +
Sbjct: 306 KDITIHANPF 315
>gi|225678216|gb|EEH16500.1| peptidyl-prolyl cis-trans isomerase B [Paracoccidioides
brasiliensis Pb03]
Length = 204
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
+A + +P + T GDI +PS AP+TV + R G YN F RV +
Sbjct: 41 SAVAAVNPAEAGTSAILHTTLGDIHLRLFPSAAPKTVVNFVTHARNGYYNNTTFHRVIRK 100
Query: 77 FVAQVADVVG----GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAAS 131
F+ Q D +G G S E + EFS ++H + LSM + PN+ S
Sbjct: 101 FMIQAGDPLGDGTGGESIWGGEFED---------EFSTLRHDKPYTLSMAN-AGPNTNGS 150
Query: 132 SFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
F I P LDG++ +FG+ KG + + K+E + T KE
Sbjct: 151 QFFITTEKTPWLDGKHTIFGRAVKGLDVVHKIENVKTYKE 190
>gi|114707078|ref|ZP_01439977.1| putative peptidyl-prolyl cis-trans isomerase a signal peptide
protein [Fulvimarina pelagi HTCC2506]
gi|114537628|gb|EAU40753.1| putative peptidyl-prolyl cis-trans isomerase a signal peptide
protein [Fulvimarina pelagi HTCC2506]
Length = 205
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 86/190 (45%), Gaps = 16/190 (8%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
FL TL + + R+ +TN G I P +AP V+ I L G Y+
Sbjct: 9 FLAGFTLAAVMPALAQDGDAAERLNIETNKGAIVVQLRPDLAPNHVEQIKALAEEGAYDN 68
Query: 68 NHFFRVDKGFVAQVADVVGGR---------SAPMNEVQRVEAEKTVVGEFSDVKHV-RGI 117
F RV GF+AQ DV G+ SA M + + + EFSD + RG
Sbjct: 69 VVFHRVIDGFMAQTGDVRFGKKGSDTFDASSAGMGGSTKPD----LNAEFSDNETFDRGT 124
Query: 118 LSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177
+ M R D NSA S F I+L D LDGQY + G V +G + + +++ R+ G P
Sbjct: 125 VGMARSQDLNSANSQFFIMLADGDFLDGQYTIVGDVVEGMDVVDQIKKGDERQNGAVEDP 184
Query: 178 T--ERITIHS 185
R+T+ S
Sbjct: 185 DVMTRVTVGS 194
>gi|253999958|ref|YP_003052021.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Methylovorus
glucosetrophus SIP3-4]
gi|253986637|gb|ACT51494.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Methylovorus
glucosetrophus SIP3-4]
Length = 222
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 7 IFLTLITLIGTASS--QEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
+FL ++T A + PQL FQTN G YP AP+TV + + V+ G
Sbjct: 11 LFLLMLTPAAMADGVHSQKPQLE-----FQTNLGSFIVELYPDRAPKTVANFMQYVQSGF 65
Query: 65 YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRY 123
Y F R+ F+ Q GG A + Q + E ++ +K+ G L+M R
Sbjct: 66 YTGTMFHRIIDRFMVQ-----GGGFA--VDFQEKSTYNPIENEANNGLKNEPGTLAMARA 118
Query: 124 SDPNSAASSFSILLGDAPHLDGQ--------YAVFGKVTKGDETLRKLEGLPTRKEGIF- 174
DPNSA S F I L D L+ Y VFGKV +G + K+ +PTR G F
Sbjct: 119 FDPNSARSQFFINLSDNKFLNFYKPDPAYFGYCVFGKVIRGMSIVEKMAKIPTRSVGKFD 178
Query: 175 VMPTERITIHSSYYYDTEMEICEKERSV 202
+P E + I DT +E + R+V
Sbjct: 179 NVPVENVVIEKVTTLDTPVEPEQPVRAV 206
>gi|67516197|ref|XP_657984.1| hypothetical protein AN0380.2 [Aspergillus nidulans FGSC A4]
gi|40747323|gb|EAA66479.1| hypothetical protein AN0380.2 [Aspergillus nidulans FGSC A4]
gi|259489377|tpe|CBF89598.1| TPA: peptidyl-prolyl cis-trans isomerase, putative (AFU_orthologue;
AFUA_1G01750) [Aspergillus nidulans FGSC A4]
Length = 629
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 16 GTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDK 75
TA+S + +LG++ + T GDI +PS AP+ V++ + G YN F RV +
Sbjct: 466 ATAASNKSGELGTS-AILHTTMGDIHLRLFPSAAPKAVENFTTHAKNGYYNNTIFHRVIR 524
Query: 76 GFVAQ----VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAA 130
F+ Q + D GG S E + EFS +KH + LSM + PN+
Sbjct: 525 KFMIQGGDPLGDGTGGESIWGGEFE---------DEFSALKHDKPYTLSMAN-AGPNTNG 574
Query: 131 SSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
S F I P LDG++ +FG+ +G + + K+E + T KE
Sbjct: 575 SQFFITTEKTPWLDGKHTIFGRAVQGLDVVHKIENVKTVKE 615
>gi|378826067|ref|YP_005188799.1| peptidyl-prolyl cis-trans isomerase,cyclophilin-type [Sinorhizobium
fredii HH103]
gi|365179119|emb|CCE95974.1| peptidyl-prolyl cis-trans isomerase,cyclophilin-type [Sinorhizobium
fredii HH103]
Length = 190
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 13 TLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFR 72
T G A +Q L + + G + P +AP+ V + +L G Y+ F R
Sbjct: 16 TFTGGAQAQSSDNL----LTIELKDGPVVIELRPDIAPKHVQQVKELAAAGEYDNVAFHR 71
Query: 73 VDKGFVAQVADVVGGRSAPMNEVQRVEAEKT-------VVGEFSDVKHVRGILSMGRYSD 125
V KGF+AQ DV G M + + EA T + EFSDV RG + M R
Sbjct: 72 VIKGFMAQTGDVQYGD---MKDGFQPEAAGTGGSSKPDLKAEFSDVPFERGTIGMARSQS 128
Query: 126 PNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
P+SA S F I+ L+GQY V GKV +G E + K++ G P I++
Sbjct: 129 PDSANSQFFIMFAPGDFLNGQYTVVGKVVEGMENVDKIKLGDDANNGAVTDPDRMISV 186
>gi|432113598|gb|ELK35881.1| Peptidyl-prolyl cis-trans isomerase-like 3 [Myotis davidii]
Length = 275
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
L V T+ GDI+ + P+ ++ L YN F R KGF+ Q D
Sbjct: 112 LPEVSVTLHTDVGDIKIEIFCERTPKACENFLALCASNYYNGCIFHRNIKGFMVQTGDPS 171
Query: 86 G-GRSAPMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPH 142
G GR N + + E E+S+ +KH VRG++SM + PN+ S F I G PH
Sbjct: 172 GTGRGG--NSIWGKKFED----EYSEYLKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPH 224
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKE---GIFVMPTERITIHSSYY 188
LD +Y VFGKV G ETL +LE LP ++ + + + ITIH++ +
Sbjct: 225 LDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF 273
>gi|409422717|ref|ZP_11259802.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas sp. HYS]
Length = 185
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ +T++G IE + AP + + + V G YN F RV GF+ Q GG
Sbjct: 24 APHVMLETSFGQIEIELNETKAPISSKNFLQYVDSGFYNNTIFHRVIPGFMVQG----GG 79
Query: 88 RSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDA----PH 142
+ M VQ+ + + + E S+ +++VRG LSM R S+PNSA S F I + D P
Sbjct: 80 FTEQM--VQK-DTKAPIRNEASNGLQNVRGTLSMARTSNPNSATSQFFINVADNAFLDPG 136
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
D YAVFGKV KG + + ++ PT +G+ +P + + I S+ D
Sbjct: 137 RDAGYAVFGKVVKGMDVVDQIVNSPTTVNKGMRDVPVDPVFIKSAKRID 185
>gi|407785784|ref|ZP_11132931.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Celeribacter
baekdonensis B30]
gi|407202734|gb|EKE72724.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Celeribacter
baekdonensis B30]
Length = 186
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VGGRSAPMN 93
G + + VAP V I L G Y+ F RV GF+AQ DV +G M
Sbjct: 32 GVVHIDLFEDVAPGHVAQITALANEGAYDGVVFHRVIDGFMAQTGDVEYGKMGAEGFSMQ 91
Query: 94 EVQRVEAE-KTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
R + + EFSD G++ M R +PNSA + F I+ APHLDGQY V GK
Sbjct: 92 MAGRGGSHFDDLKAEFSDKTFDTGVVGMARSQNPNSANAQFFIMFAPAPHLDGQYTVVGK 151
Query: 153 VTKGDETLRKLE 164
VT+G + + ++
Sbjct: 152 VTQGMDVVNAIK 163
>gi|380019100|ref|XP_003693453.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like [Apis
florea]
Length = 193
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 19 SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFV 78
S Q+D + S V T+ GDI+ + + P+T ++ L Y+ F R KGF+
Sbjct: 25 SKQKDSRQSS--VTLHTDIGDIKIELFCELCPKTCENFLALCASNYYDNCLFHRNIKGFI 82
Query: 79 AQVADVV----GGRSAPMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASS 132
Q D GG S + EF + ++H RG +SM + PN+ S
Sbjct: 83 VQTGDPTHTGKGGTSI---------WNRPFEDEFKEELRHNARGFVSMAN-NGPNTNGSQ 132
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTER---ITIHSS 186
F I G PHLD +Y +FGK+ G ETL +LE LP + + R ITIH++
Sbjct: 133 FFITYGPQPHLDLKYTLFGKIIDGLETLEQLEKLPVNPKNYRPLTETRINNITIHAN 189
>gi|238917034|ref|YP_002930551.1| peptidyl-prolyl cis-trans isomerase B [Eubacterium eligens ATCC
27750]
gi|238872394|gb|ACR72104.1| peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [Eubacterium
eligens ATCC 27750]
Length = 205
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 17 TASSQEDPQL-GSARVVFQ-TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVD 74
+++S + QL G V + NYG IE AP TV + L G YN F RV
Sbjct: 30 SSTSDGNTQLSGKHHVAIEVNNYGTIEVELDADTAPITVTNFINLANSGFYNGLTFHRVI 89
Query: 75 KGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFS 134
GF+ Q D G + +E +++ E G +++ H+RG +SM R S NSA+S F
Sbjct: 90 DGFMIQGGDPNGDGTGGSSE--KIKGEFKSNGVQNNISHIRGTISMARSSANNSASSQFF 147
Query: 135 ILLGDAPHLDGQYAVFGKVTKGDETLRKL--EGLPTRKEGIFVMPTERITI 183
I+ D P LDGQYA FG VT G + + K+ + T + G+ +++ I
Sbjct: 148 IMQKDTPSLDGQYAAFGTVTSGMDIVDKICKDCTDTNQNGVITDKSKQPVI 198
>gi|359791960|ref|ZP_09294792.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359252023|gb|EHK55323.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 194
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 16 GTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDK 75
G+A+ +P+ +V GD+ P +AP+ V+ I LVR G Y+ F RV +
Sbjct: 19 GSAAIAAEPE---NTMVITLEQGDVTIALRPDLAPKHVEQIKALVRGGEYDNVAFHRVIE 75
Query: 76 GFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAAS 131
GF+AQ DV G + R + + EFS +VRG + M R P+SA S
Sbjct: 76 GFMAQTGDVEFGDMKDGFDPDRAGTGGSKLPDLPAEFSAEPYVRGTVGMARAQSPDSANS 135
Query: 132 SFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIH 184
F I+ P L+GQY V G V G E + +++ G+ P + +
Sbjct: 136 QFFIMFAPNPGLEGQYTVVGTVESGMELIDQVKKGDPAMNGVVSEPDRMVKVR 188
>gi|90419654|ref|ZP_01227564.1| peptidyl-prolyl cis-trans isomerase [Aurantimonas manganoxydans
SI85-9A1]
gi|90336591|gb|EAS50332.1| peptidyl-prolyl cis-trans isomerase [Aurantimonas manganoxydans
SI85-9A1]
Length = 156
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 7/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T G + P +AP V + +L R G Y+ F RV GF+AQ D G +
Sbjct: 10 LVLETTKGQVVIKLRPDLAPNHVARVKELAREGFYDGVVFHRVIDGFMAQTGDPTGTGAG 69
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
++ + EFS H RG +S R ++PNSA S F I AP LD QY+V+
Sbjct: 70 GSDK-------PDLRAEFSAEPHKRGTVSAARTANPNSANSQFYICFDRAPWLDRQYSVW 122
Query: 151 GKVTKGDETLRKLE 164
G+V +G + + K++
Sbjct: 123 GEVIEGMDNVDKIK 136
>gi|146277145|ref|YP_001167304.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17025]
gi|145555386|gb|ABP69999.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Rhodobacter
sphaeroides ATCC 17025]
Length = 169
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ G++ P VAP+ + + L R Y+ F RV +GF+AQ DV G +
Sbjct: 11 IIMTLKDGEVVIELLPDVAPKHSERMKALARAKAYDNVVFHRVIEGFMAQTGDVANGNTE 70
Query: 91 PMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
++R + + EFS + H RG L R +PNSA S F I D L+GQ
Sbjct: 71 NNFSIRRAGTGGSDMPDLPAEFSKLPHARGTLGAARSQNPNSANSQFFINFRDNDFLNGQ 130
Query: 147 YAVFGKVTKGDETLRKL 163
Y V+G+V G E + K+
Sbjct: 131 YTVYGRVISGMEHVDKI 147
>gi|288958276|ref|YP_003448617.1| peptidylprolyl isomerase [Azospirillum sp. B510]
gi|288910584|dbj|BAI72073.1| peptidylprolyl isomerase [Azospirillum sp. B510]
Length = 189
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV 105
P +AP V I +L R G YN F RV GF+AQ D G + K +
Sbjct: 53 PDLAPNHVARIKELTRQGFYNGVVFHRVIDGFMAQTGDPTGTGMG--------GSGKKLK 104
Query: 106 GEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEG 165
EFS H+RG LSM R DP+SA S F I + LD QY V+G+V +G E + ++
Sbjct: 105 AEFSSAPHIRGTLSMARAQDPDSADSQFFICFAPSQFLDRQYTVWGRVVEGMEFVDMIKK 164
Query: 166 LPTRKEGIFVMPTERITIH 184
+ G P + I +
Sbjct: 165 GSQSRNGQVTDPDKIIKMQ 183
>gi|421728581|ref|ZP_16167733.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Klebsiella
oxytoca M5al]
gi|410370490|gb|EKP25219.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Klebsiella
oxytoca M5al]
Length = 168
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +VD+ K V G YN F RV GF+ Q G
Sbjct: 5 GDPHVLLTTSAGNIELELNSQKAPISVDNFLKYVNSGFYNNTTFHRVIPGFMVQ----GG 60
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD- 144
G + M Q+ + + E + +++ RG ++M R +D +SA S F I + D LD
Sbjct: 61 GFNEQM---QQKQPNPPIKNEADNGLRNTRGTIAMARTADQDSATSQFFINIADNAFLDH 117
Query: 145 GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGKV KG + K+ +PT G + +P++ I I S+
Sbjct: 118 GQRDFGYAVFGKVVKGMDVADKISQVPTHNVGPYQNVPSKPIVILSA 164
>gi|340357030|ref|ZP_08679665.1| peptidyl-prolyl cis-trans isomerase [Sporosarcina newyorkensis
2681]
gi|339619454|gb|EGQ24034.1| peptidyl-prolyl cis-trans isomerase [Sporosarcina newyorkensis
2681]
Length = 228
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV 105
PSVAP TV + L+ G Y+ F RV GF+ Q D + ++ E T
Sbjct: 77 PSVAPNTVANFISLIEEGYYDGLIFHRVIPGFMIQGGDPS--GNGSGGPGYSIDGEFTSN 134
Query: 106 GEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL 163
G +++KH RG++SM R +PNSA S F I+ D LD +YA FGKV +G E + +
Sbjct: 135 GFKNNLKHERGVISMARTGEPNSAGSQFFIMAEDTSQLDEEYAAFGKVIEGMEIVDAI 192
>gi|422015972|ref|ZP_16362563.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Providencia
burhodogranariea DSM 19968]
gi|414095627|gb|EKT57288.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Providencia
burhodogranariea DSM 19968]
Length = 190
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
RIF+ L+ + ++S G V T+ G+IE AP T ++ + V G Y
Sbjct: 4 RIFVPLLAVCAISASSLAFSAGETYVKLVTSAGNIELELNDKKAPVTTENFLQYVNEGYY 63
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYS 124
N F RV GF+ Q GG + ++Q+ + V E + ++++RG +SM R S
Sbjct: 64 NGTTFHRVIPGFMIQ----GGGFN---KDLQQKQTRAPVKNEADNGLRNLRGTISMARTS 116
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
+ +SA S F I + D LD GQ YAVFGKV KG + + K+ + T G + +P
Sbjct: 117 NKDSATSQFFINIADNAFLDHGQRDFGYAVFGKVVKGMDVVDKISKVKTENVGPYQNVPV 176
Query: 179 ERITIHSS 186
E I+I S+
Sbjct: 177 EPISIISA 184
>gi|429759829|ref|ZP_19292324.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Veillonella
atypica KON]
gi|429179049|gb|EKY20311.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Veillonella
atypica KON]
Length = 212
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 32 VFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAP 91
VF TNYG I+ Y S AP TV + LV+ G YN F RV GF+ Q D
Sbjct: 57 VFDTNYGQIKIRLYGSKAPITVKNFDYLVKKGFYNGVTFHRVIDGFMIQGGDPT------ 110
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVR--GILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ EFS+ H GIL+M PN+ S F I LG PHLD ++ +
Sbjct: 111 --GTGAGGPGYEIPDEFSNDLHFNKMGILAMANRG-PNTGGSQFFITLGPTPHLDNKHTI 167
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
FG V +G + + K+ + T K P + +TI+S
Sbjct: 168 FGIVVQGMDVVEKIGKVKTDKND---KPVDPVTINS 200
>gi|289450515|ref|YP_003475140.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289185062|gb|ADC91487.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 278
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 83/184 (45%), Gaps = 23/184 (12%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G A +V Q +P AP TV + KLV G YN F R FV Q D G
Sbjct: 75 GGASIVIQ---------LFPQAAPLTVANFQKLVGKGFYNGLTFHRAVPQFVIQGGDPSG 125
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLG--DAPHLD 144
S +E V+ E G F+ +KH RG++SM R D +SA+S F I+L +L+
Sbjct: 126 NGSGGSDET--VKGEFLTNGIFNPLKHKRGVVSMARSQDKDSASSQFFIVLDSRSGSNLN 183
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICEKERSVLK 204
QYA FG V G + + ++ L T E I P I +Y+ I KE L
Sbjct: 184 DQYAAFGDVIYGMDEVDRIAALKTNNEAIIDKP----VISKAYF------ITRKEAESLG 233
Query: 205 RRLT 208
+ T
Sbjct: 234 AKPT 237
>gi|358398693|gb|EHK48044.1| hypothetical protein TRIATDRAFT_155283 [Trichoderma atroviride IMI
206040]
Length = 626
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ---- 80
+ G+A + T YGDI +P AP+ V++ + G YN F RV + F+ Q
Sbjct: 472 ETGNA-AILHTTYGDIHIRLFPDAAPKAVENFVTHAKRGYYNNTIFHRVIRKFMIQGGDP 530
Query: 81 VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA 140
+ D GG S + + EFS +KH + + PN+ AS F I
Sbjct: 531 LGDGTGGESIWGRDFE---------DEFSSLKHDKPYTVSMANAGPNTNASQFFITTEKT 581
Query: 141 PHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
P LDG++ +FG+ T+G + + K+E T KE P E I I
Sbjct: 582 PWLDGKHTIFGRATQGLDVIHKIENTRTHKE----KPEEDIKI 620
>gi|429854598|gb|ELA29602.1| peptidyl-prolyl cis-trans [Colletotrichum gloeosporioides Nara gc5]
Length = 620
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G+A V+ T YGDI +P AP+ V++ + G YN F RV + F+ Q D +G
Sbjct: 468 GTAAVI-HTTYGDIHIRLFPDAAPKAVENFVTHSKKGYYNNTIFHRVIRKFMIQCGDPLG 526
Query: 87 ----GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
G S E + EFS +KH + + PN+ S F I P
Sbjct: 527 DGTGGESIWGKEFE---------DEFSSLKHDKPYTVSMANAGPNTNGSQFFITTEKTPW 577
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
LDG++ +FG+ T+G + + K+E + T KE P E I I
Sbjct: 578 LDGKHTIFGRATQGLDVIHKIENVRTYKE----KPEEDIKI 614
>gi|226287716|gb|EEH43229.1| peptidyl-prolyl cis-trans isomerase cyp15 [Paracoccidioides
brasiliensis Pb18]
Length = 632
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKG 76
+A + +P + T GDI +PS AP+TV + R G YN F RV +
Sbjct: 469 SAVAAVNPAEAGTSAILHTTLGDIHLRLFPSAAPKTVVNFVTHARNGYYNNTTFHRVIRK 528
Query: 77 FVAQVADVVG----GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAAS 131
F+ Q D +G G S E + EFS ++H + LSM + PN+ S
Sbjct: 529 FMIQAGDPLGDGTGGESIWGGEFE---------DEFSTLRHDKPYTLSMAN-AGPNTNGS 578
Query: 132 SFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
F I P LDG++ +FG+ KG + + K+E + T KE
Sbjct: 579 QFFITTEKTPWLDGKHTIFGRAVKGLDVVHKIENVKTYKE 618
>gi|398790795|ref|ZP_10551724.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pantoea sp. YR343]
gi|398217255|gb|EJN03776.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pantoea sp. YR343]
Length = 190
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +V + V G YN F RV GF+ Q G
Sbjct: 27 GDPHVLLTTSAGNIELELNNQKAPVSVKNFVDYVNNGFYNNTIFHRVIPGFMIQ----GG 82
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD-G 145
G + M + Q V K + ++++RG +SM R +D +SA S F + + D LD G
Sbjct: 83 GFTTDMQQKQTVAPIKNEAD--NGLRNLRGTISMARTADKDSATSQFFLNVADNAFLDHG 140
Query: 146 Q----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
Q YAVFGKV KG + + K+ +PT+ G + +P++ I I S+
Sbjct: 141 QRDFGYAVFGKVVKGQDVIDKIAQVPTKDVGPYQNVPSKPIVILSA 186
>gi|383865363|ref|XP_003708143.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like
[Megachile rotundata]
Length = 161
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV-GGRS 89
V T+ GDI+ + + P+T ++ L YN F R KGF+ Q D G+
Sbjct: 3 VTLHTDVGDIKIELFCELCPKTCENFLALCASNYYNNCLFHRNIKGFIVQTGDPTQTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E ++KH RG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GTSIWNRKFEDEFK-----EELKHNTRGLVSMAN-NGPNTNGSQFFITYGPQPHLDLKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSS 186
+FG+V G +TL +LE LP + + RI TIH++
Sbjct: 117 LFGRVIDGLDTLEQLEKLPVSPKNYKPLTETRINNVTIHAN 157
>gi|365885612|ref|ZP_09424603.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
sp. ORS 375]
gi|365285717|emb|CCD97134.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
sp. ORS 375]
Length = 154
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 69/137 (50%), Gaps = 14/137 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---G 87
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ G G
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGCPQGTGMG 67
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
S K + EF+ HVRG SM R ++P+S S F I DA LD QY
Sbjct: 68 GSG-----------KKLKAEFNAEPHVRGTASMARAANPDSGDSQFFICFDDARFLDKQY 116
Query: 148 AVFGKVTKGDETLRKLE 164
V+GKVT+G E + K++
Sbjct: 117 TVWGKVTEGMENVDKIK 133
>gi|240141422|ref|YP_002965902.1| peptidyl-prolyl cis-trans isomerase B [Methylobacterium extorquens
AM1]
gi|418062584|ref|ZP_12700356.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Methylobacterium extorquens DSM 13060]
gi|240011399|gb|ACS42625.1| peptidyl-prolyl cis-trans isomerase B (rotamase B)(PPIase B)
[Methylobacterium extorquens AM1]
gi|373563870|gb|EHP90026.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Methylobacterium extorquens DSM 13060]
Length = 153
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T G + +AP V+ I L G YN F RV GF+AQ D G S
Sbjct: 8 IVLETTKGRVVIALRADLAPNHVERIKTLTTQGFYNGVPFHRVIDGFMAQTGDPTGTGSG 67
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+E+ + AE F+ HVRG SM R + P+SA S F I DA LD QY V+
Sbjct: 68 -GSELPDLNAE------FNAEPHVRGTCSMARTNFPHSANSQFFICFSDARFLDRQYTVW 120
Query: 151 GKVTKGDETLRKLE-GLPTR 169
GKV +G E + ++ G P R
Sbjct: 121 GKVIEGMEVVDTIKRGEPVR 140
>gi|358366955|dbj|GAA83575.1| peptidyl-prolyl cis-trans isomerase [Aspergillus kawachii IFO 4308]
Length = 629
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A++ + +LG++ + T GDI YPS AP+ V++ R G YN F RV + F
Sbjct: 468 AAAPKAAELGTS-AILHTTMGDIHLRLYPSAAPKAVENFTTHARNGYYNNTIFHRVIRKF 526
Query: 78 VAQ----VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASS 132
+ Q + D GG S E + EFS +KH + LSM + PN+ S
Sbjct: 527 MIQGGDPLGDGTGGESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNGSQ 576
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
F I P LDG++ VFG+ +G + + K+E T KE
Sbjct: 577 FFITTEKTPWLDGKHTVFGRAVQGLDVVHKIENTKTFKE 615
>gi|163746651|ref|ZP_02154008.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Oceanibulbus indolifex HEL-45]
gi|161379765|gb|EDQ04177.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Oceanibulbus indolifex HEL-45]
Length = 168
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G + P +AP+ V+ + +L R G Y+ F RV +GF+AQ DV G
Sbjct: 11 ILMELKGGTVTIELMPDLAPKHVERMKELARAGKYDNVAFHRVIEGFMAQTGDVANGN-- 68
Query: 91 PMNEVQRVEAEKT-------VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
M + + A T + EFS V H RG + R ++P+SA S F I D L
Sbjct: 69 -MEDNFNLRAAGTGGSDMPNLPAEFSKVPHARGTIGAARSANPDSANSQFFINFKDNDFL 127
Query: 144 DGQYAVFGKVTKGDETLRKL 163
+GQY V+G+V G E + L
Sbjct: 128 NGQYTVYGQVISGMEHVDAL 147
>gi|145229527|ref|XP_001389072.1| peptidyl-prolyl cis-trans isomerase cyp15 [Aspergillus niger CBS
513.88]
gi|134055180|emb|CAK43767.1| unnamed protein product [Aspergillus niger]
Length = 629
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A++ + +LG++ + T GDI YPS AP+ V++ R G YN F RV + F
Sbjct: 468 AAAPKAAELGTS-AILHTTMGDIHLRLYPSAAPKAVENFTTHARNGYYNNTIFHRVIRKF 526
Query: 78 VAQ----VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASS 132
+ Q + D GG S E + EFS +KH + LSM + PN+ S
Sbjct: 527 MIQGGDPLGDGTGGESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNGSQ 576
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
F I P LDG++ VFG+ +G + + K+E T KE
Sbjct: 577 FFITTEKTPWLDGKHTVFGRAVQGLDVVHKIENTKTFKE 615
>gi|398801181|ref|ZP_10560428.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pantoea sp. GM01]
gi|398092553|gb|EJL82963.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pantoea sp. GM01]
Length = 190
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +V + V G YN F RV GF+ Q G
Sbjct: 27 GDTHVLLTTSAGNIELELNNQKAPVSVKNFVDYVNNGFYNNTIFHRVIPGFMIQ----GG 82
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD-G 145
G + M + Q V K + ++++RG +SM R +D +SA S F + + D LD G
Sbjct: 83 GFTTDMQQKQTVAPIKNEAD--NGLRNLRGTISMARTADKDSATSQFFLNVADNAFLDHG 140
Query: 146 Q----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
Q YAVFGKV KG + + K+ +PT+ G + +P++ I I S+
Sbjct: 141 QRDFGYAVFGKVVKGQDVVDKIAQVPTKDVGPYQNVPSKPIVILSA 186
>gi|225558154|gb|EEH06439.1| peptidyl-prolyl cis-trans isomerase cypE [Ajellomyces capsulatus
G186AR]
Length = 629
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 32 VFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV----GG 87
V T GDI +PS AP+TV++ R G YN F RV + F+ Q D + GG
Sbjct: 481 VLHTTLGDIHLRLFPSAAPKTVENFVTHSRNGYYNNTIFHRVIRKFMIQAGDPLGDGTGG 540
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
S E + EFS ++H + LSM + PN+ S F I P LDG+
Sbjct: 541 ESIWGGEFE---------DEFSTLRHDKPYTLSMAN-AGPNTNGSQFFITTEKTPWLDGK 590
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
+ +FG+ KG + + K+E + T KE P E + I S
Sbjct: 591 HTIFGRAVKGLDVVHKIENVKTYKE----KPEEDVKIVS 625
>gi|37680779|ref|NP_935388.1| peptidyl-prolyl cis-trans isomerase [Vibrio vulnificus YJ016]
gi|320155551|ref|YP_004187930.1| hypothetical protein VVMO6_00705 [Vibrio vulnificus MO6-24/O]
gi|37199528|dbj|BAC95359.1| Peptidyl-prolyl cis-trans isomerase [Vibrio vulnificus YJ016]
gi|319930863|gb|ADV85727.1| hypothetical lipoprotein YajG precursor [Vibrio vulnificus
MO6-24/O]
Length = 181
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
L +V F+T+ G+ AP +V++ K V+ G Y + F RV GF+AQ
Sbjct: 17 LAGPKVEFETSLGNFTVELNEEKAPISVENFVKYVKDGSYVGSQFHRVIPGFMAQ----G 72
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
GG MN R+ + + E S+ +K+V G ++M R DPNSA F I L D LD
Sbjct: 73 GGFDEKMN---RLPSYAPIKNEASNGLKNVTGSIAMARTQDPNSATRQFFINLVDNEFLD 129
Query: 145 -----GQYAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITI 183
YAVFG+VT+G + ++++ PT+ +G +P E I I
Sbjct: 130 YDLQPPGYAVFGQVTEGFDVIQQMASKPTKSQGYMRDIPVEPIVI 174
>gi|329889242|ref|ZP_08267585.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Brevundimonas diminuta ATCC 11568]
gi|328844543|gb|EGF94107.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family
protein [Brevundimonas diminuta ATCC 11568]
Length = 154
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 47 SVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVV 105
+AP V I L + G Y+ F RV GF+AQ D G G S + +
Sbjct: 27 DLAPNHVKQITDLAKEGFYDGVVFHRVIPGFMAQGGDPTGTGTSG--------SKKPNLK 78
Query: 106 GEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL-E 164
EFS HVRG+ SM R ++P+SA S F I DA LDGQY V+G+V +G E + L +
Sbjct: 79 QEFSKEPHVRGVCSMARTANPDSANSQFFICFDDARFLDGQYTVWGEVIEGMEHVDALPK 138
Query: 165 GLPTRKEGIFVMPT 178
G P R G V T
Sbjct: 139 GEPPRAPGKIVKAT 152
>gi|374291676|ref|YP_005038711.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Azospirillum
lipoferum 4B]
gi|357423615|emb|CBS86475.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Azospirillum
lipoferum 4B]
Length = 189
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 46 PSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV 105
P +AP V I +L R G YN F RV GF+AQ D G + K +
Sbjct: 53 PDLAPNHVARIKELTRQGFYNGVVFHRVIDGFMAQTGDPTGTGMG--------GSGKKLK 104
Query: 106 GEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE 158
EFS H+RG LSM R DP+SA S F I + LD QY V+G+V +G E
Sbjct: 105 AEFSSAPHIRGTLSMARAQDPDSADSQFFICFAPSNFLDRQYTVWGRVVEGME 157
>gi|348533470|ref|XP_003454228.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like
[Oreochromis niloticus]
Length = 161
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V ++ GDI+ + P+ ++ L G YN F R KGF+ Q D G G+
Sbjct: 3 VTLHSDLGDIKIELFCERTPRACENFLALCASGFYNGCVFHRNIKGFMVQTGDPTGTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
++ E E FS+ +KH VRG++SM + PN+ S F PHLD +Y
Sbjct: 63 GTSIWGRKFEDE------FSEHLKHNVRGVVSMAN-NGPNTNGSQFFFTYAKQPHLDMKY 115
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSSYY 188
VFGK+ G ETL +LE LP ++ + RI TIH++ +
Sbjct: 116 TVFGKIIDGLETLDELEKLPVNEKTFRPLTETRIKDVTIHANPF 159
>gi|154280793|ref|XP_001541209.1| peptidyl-prolyl cis-trans isomerase cypE [Ajellomyces capsulatus
NAm1]
gi|150411388|gb|EDN06776.1| peptidyl-prolyl cis-trans isomerase cypE [Ajellomyces capsulatus
NAm1]
Length = 629
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 32 VFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG----G 87
V T GDI +PS AP+TV++ R G YN F RV + F+ Q D +G G
Sbjct: 481 VLHTTLGDIHLRLFPSAAPKTVENFVTHSRNGYYNNTIFHRVIRKFMIQAGDPLGDGTGG 540
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
S E + EFS ++H + LSM + PN+ S F I P LDG+
Sbjct: 541 ESIWGGEFE---------DEFSTLRHDKPYTLSMAN-AGPNTNGSQFFITTEKTPWLDGK 590
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKE 171
+ +FG+ KG + + K+E + T KE
Sbjct: 591 HTIFGRAVKGLDVVHKIENVKTYKE 615
>gi|423126122|ref|ZP_17113801.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella oxytoca 10-5250]
gi|376397694|gb|EHT10324.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella oxytoca 10-5250]
Length = 189
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +VD+ K V G YN F RV GF+ Q G
Sbjct: 26 GDPHVLLTTSAGNIELELNSQKAPISVDNFLKYVNSGFYNNTTFHRVIPGFMVQ-----G 80
Query: 87 GRSAPMNE-VQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
G NE +Q+ + + E + +++ RG ++M R +D +SA S F I + D LD
Sbjct: 81 GG---FNEQMQQKQPNPPIKNEADNGLRNTRGTIAMARTADQDSATSQFFINIADNAFLD 137
Query: 145 -GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGKV KG + K+ +PT G + +P++ + I S+
Sbjct: 138 HGQRDFGYAVFGKVVKGMDVADKISQVPTHNVGPYQNVPSKPVVILSA 185
>gi|325095881|gb|EGC49191.1| peptidyl-prolyl cis-trans isomerase [Ajellomyces capsulatus H88]
Length = 629
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 32 VFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV----GG 87
V T GDI +PS AP+TV++ R G YN F RV + F+ Q D + GG
Sbjct: 481 VLHTTLGDIHLRLFPSAAPKTVENFVTHSRNGYYNNTIFHRVIRKFMIQAGDPLGDGTGG 540
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
S E + EFS ++H + LSM + PN+ S F I P LDG+
Sbjct: 541 ESIWGGEFE---------DEFSTLRHDKPYTLSMAN-AGPNTNGSQFFITTEKTPWLDGK 590
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
+ +FG+ KG + + K+E + T KE P E + I S
Sbjct: 591 HTIFGRAVKGLDVVHKIENVKTYKE----KPEEDVKIVS 625
>gi|291619212|ref|YP_003521954.1| PpiA [Pantoea ananatis LMG 20103]
gi|291154242|gb|ADD78826.1| PpiA [Pantoea ananatis LMG 20103]
Length = 212
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +V + V G YN F RV GF+ Q G
Sbjct: 49 GDTHVLLTTSAGNIELELNNQKAPVSVKNFVDYVNSGFYNNTIFHRVIPGFMIQ----GG 104
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD- 144
G ++ E+Q+ + + E + ++++RG +SM R +D +SA S F + + D LD
Sbjct: 105 GFTS---EMQQKQTNAPIKNEADNGLRNLRGTISMARTADKDSATSQFFLNVADNAFLDH 161
Query: 145 GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGK+ KG + + K+ +PT+ G + +PT+ + I S+
Sbjct: 162 GQRDFGYAVFGKIVKGQDVVDKISQVPTKDVGPYQNVPTKPVVILSA 208
>gi|240273395|gb|EER36916.1| peptidyl-prolyl cis-trans isomerase cypE [Ajellomyces capsulatus
H143]
Length = 315
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 32 VFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV----GG 87
V T GDI +PS AP+TV++ R G YN F RV + F+ Q D + GG
Sbjct: 167 VLHTTLGDIHLRLFPSAAPKTVENFVTHSRNGYYNNTIFHRVIRKFMIQAGDPLGDGTGG 226
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
S E + EFS ++H + LSM + PN+ S F I P LDG+
Sbjct: 227 ESIWGGEFE---------DEFSTLRHDKPYTLSMAN-AGPNTNGSQFFITTEKTPWLDGK 276
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
+ +FG+ KG + + K+E + T KE P E + I S
Sbjct: 277 HTIFGRAVKGLDVVHKIENVKTYKE----KPEEDVKIVS 311
>gi|261344429|ref|ZP_05972073.1| peptidylprolyl isomerase A [Providencia rustigianii DSM 4541]
gi|282567332|gb|EFB72867.1| peptidylprolyl isomerase A [Providencia rustigianii DSM 4541]
Length = 190
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
RIF+ L+ + +++ G V T+ GDIE AP + ++ + V G Y
Sbjct: 4 RIFVPLLAICAMSTTSLALAAGETYVKLVTSAGDIELELNSKKAPVSTENFVQYVNEGYY 63
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYS 124
N F RV GF+ Q GG + E+Q+ + + E + ++++RG +SM R +
Sbjct: 64 NGTTFHRVIPGFMIQ----GGGFN---KELQQKQTRAPIKNEADNGLRNLRGTISMARSA 116
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
+ +SA S F I + D LD GQ YAVFGKV KG + K+ + T G + +P
Sbjct: 117 NKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISKVKTENVGPYQNVPV 176
Query: 179 ERITIHSS 186
E ITI S+
Sbjct: 177 EPITIISA 184
>gi|146277146|ref|YP_001167305.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhodobacter
sphaeroides ATCC 17025]
gi|145555387|gb|ABP70000.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Rhodobacter
sphaeroides ATCC 17025]
Length = 197
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G++ P VAPQ V+ + L + Y+ F RV +GF+AQ DV G+ +
Sbjct: 52 GEVVIDLLPEVAPQHVERMVTLAKESAYDGVVFHRVIEGFMAQTGDVEFGKGDSLRRAGT 111
Query: 98 VEAE-KTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ + EFSDV RG++ M R ++PNSA S F I+ L+GQY V G+V +G
Sbjct: 112 GGSSYPDLPAEFSDVPFARGVVGMARSANPNSANSQFFIMFAPGDFLNGQYTVVGRVVQG 171
Query: 157 DETLRKL-EGLPTR 169
+ + + G P R
Sbjct: 172 MDVVDAITRGEPPR 185
>gi|27379801|ref|NP_771330.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium japonicum USDA
110]
gi|383771712|ref|YP_005450777.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium sp. S23321]
gi|27352954|dbj|BAC49955.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium japonicum USDA
110]
gi|381359835|dbj|BAL76665.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium sp. S23321]
Length = 154
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV +GF+AQ
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIEGFMAQTG-------C 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + K + EF+ HVRG SM R + P+S S F I DA LD QY V+
Sbjct: 61 P-QGTGTGGSGKKLKAEFNKEPHVRGTTSMARAASPDSGDSQFFICFDDARFLDNQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKVT+G E + K++
Sbjct: 120 GKVTEGMENVDKIK 133
>gi|115524775|ref|YP_781686.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Rhodopseudomonas palustris BisA53]
gi|115518722|gb|ABJ06706.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Rhodopseudomonas palustris BisA53]
Length = 149
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV +GF+AQ
Sbjct: 1 MILETTQGPVTIEMRPDLAPNHVARIQELVREGFYDGIVFHRVIEGFMAQTG-------C 53
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P K + EF+ HVRG SM R + P+S S F I DA L+ QY V+
Sbjct: 54 PQGTGTGGSGTK-LKAEFNAEPHVRGTTSMARAASPDSGDSQFFICFDDASFLNKQYTVW 112
Query: 151 GKVTKGDETLRKLE 164
GKVT+G E + K++
Sbjct: 113 GKVTEGMENVDKIK 126
>gi|378581348|ref|ZP_09829995.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pantoea
stewartii subsp. stewartii DC283]
gi|377815855|gb|EHT98963.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pantoea
stewartii subsp. stewartii DC283]
Length = 190
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +V + V G YN F RV GF+ Q G
Sbjct: 27 GDTHVLLTTSAGNIELELNNQKAPISVKNFVDYVNSGFYNNTIFHRVIPGFMIQ----GG 82
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD- 144
G + NE+Q+ + + E + ++++RG +SM R SD +SA S F + + D LD
Sbjct: 83 GFT---NEMQQKQTNAPIKNEADNGLRNLRGTISMARTSDKDSATSQFFLNVADNAFLDH 139
Query: 145 GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGK+ KG + + K+ +PT+ G + +P + + I S+
Sbjct: 140 GQRDFGYAVFGKIVKGQDVVDKISQVPTKDVGPYQNVPVKPVVILSA 186
>gi|303230490|ref|ZP_07317249.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Veillonella
atypica ACS-049-V-Sch6]
gi|302514856|gb|EFL56839.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Veillonella
atypica ACS-049-V-Sch6]
Length = 197
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 32 VFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAP 91
VF TNYG I+ Y S AP TV + LV+ G YN F RV GF+ Q D
Sbjct: 42 VFDTNYGQIKIRLYGSKAPITVKNFDYLVKKGFYNGVTFHRVIDGFMIQGGDPT------ 95
Query: 92 MNEVQRVEAEKTVVGEFSDVKHVR--GILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ EFS+ H GIL+M PN+ S F I LG PHLD ++ +
Sbjct: 96 --GTGAGGPGYEIPDEFSNDLHFNKMGILAMANRG-PNTGGSQFFITLGPTPHLDNKHTI 152
Query: 150 FGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHS 185
FG V +G + + K+ + T K P + +TI+S
Sbjct: 153 FGIVVQGMDVVEKIGKVKTDKND---KPVDPVTINS 185
>gi|238027922|ref|YP_002912153.1| peptidyl-prolyl cis-trans isomerase A [Burkholderia glumae BGR1]
gi|237877116|gb|ACR29449.1| Peptidyl-prolyl cis-trans isomerase A [Burkholderia glumae BGR1]
Length = 192
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSAR---VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRL 62
R+ L L + A++ Q +A V +T GDI YP AP+TV + V+
Sbjct: 3 RLLLALGSAAFVATAPVYAQTAAAAHPVVQLKTTQGDIRVELYPEKAPKTVANFLDYVKA 62
Query: 63 GCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGR 122
G YN F RV GF+ Q G N ++ + + +K++ G ++M R
Sbjct: 63 GQYNGTIFHRVIPGFMIQ------GGGYKENFDEKPTRAPIPLESRNGLKNLTGTIAMAR 116
Query: 123 YSDPNSAASSFSILLGDA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEG-IFV 175
SDPNSA + F I D P+ DG YAVFGKV G + ++K+E PT G +
Sbjct: 117 TSDPNSATAQFFINTVDNAGLDYPNPDGNGYAVFGKVVSGMDVVKKIEAAPTTVHGSMRD 176
Query: 176 MPTERITIHSS 186
+P + + I S+
Sbjct: 177 VPQKPVVIESA 187
>gi|398854431|ref|ZP_10610995.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pseudomonas sp. GM80]
gi|398235941|gb|EJN21744.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Pseudomonas sp. GM80]
Length = 187
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ T G IE P AP + + V G Y F RV GF+AQ GG
Sbjct: 26 APHVLLDTTNGQIEIELDPVKAPISTKNFLDYVNSGFYTNTIFHRVIPGFMAQ-----GG 80
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDA----PH 142
P ++Q+ + + + E S+ H VRG LSM R S+P+SA S F I + D P
Sbjct: 81 GFTP--QMQQKDTKAPIKNEASNGLHNVRGTLSMARTSNPDSATSQFFINVKDNDFLDPG 138
Query: 143 LDGQYAVFGKVTKGDETLRKLEGLP-TRKEGIFVMPTERITIHSSYYYD 190
D YAVF KV KG + + + P T K G+ +P++ + I S+ D
Sbjct: 139 RDAGYAVFAKVVKGMDVVDIIVNSPTTTKSGMQNVPSDPVIIKSAKVID 187
>gi|227112129|ref|ZP_03825785.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|403060293|ref|YP_006648510.1| peptidyl-prolyl cis-trans isomerase A [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402807619|gb|AFR05257.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 190
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ RV+ T+ G+IE AP +V + + V G YN F RV GF+ Q GG
Sbjct: 28 TTRVLLTTSAGNIELSLDNQKAPVSVKNFVEYVNNGFYNGTTFHRVIPGFMVQ----GGG 83
Query: 88 RSAPMNEVQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD- 144
S M++ +A + +D +++ RG ++M R SD +SA S F I + D LD
Sbjct: 84 FSGEMSQ----KATNAPIKNEADNGLRNQRGTIAMARTSDKDSATSQFFINVADNAFLDH 139
Query: 145 GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGKV KG + + K+ +PT+ G + +PT + I S+
Sbjct: 140 GQRDFGYAVFGKVVKGMDVVDKISQVPTKNVGPYQNVPTTPVVIQSA 186
>gi|167045118|gb|ABZ09781.1| putative cyclophilin type peptidyl-prolyl cis-trans isomerase
[uncultured marine crenarchaeote HF4000_APKG8I13]
Length = 542
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 1 MLNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
+L + I + T A +Q D ++ VVF T +G + + AP TV++ KL
Sbjct: 5 LLTTVTILVFCFTSTALAFAQNDDKI----VVFHTEFGHLAIELFSDDAPNTVENFLKLA 60
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSM 120
Y+ F R+ GF+ Q D + + ++ + + EF+++KH RGI+SM
Sbjct: 61 ESDFYDKTIFHRIINGFMIQGGD-PNSKESDQSKWGQGGTGDNLKAEFNNIKHDRGIVSM 119
Query: 121 GRYSDPNSAASSFSILLG-DAPHLDGQYAVFGKVTKGD--ETLRKLEGLPTRKEGI 173
R + P+SA+S F I+ LD +Y VFG++ + +TL K+ L T+ I
Sbjct: 120 ARSAHPDSASSQFFIVHDRHVKTLDEKYTVFGRIITQESYDTLDKIADLETKAGNI 175
>gi|423116701|ref|ZP_17104392.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella oxytoca 10-5245]
gi|376377669|gb|EHS90437.1| peptidyl-prolyl cis-trans isomerase A [Klebsiella oxytoca 10-5245]
Length = 189
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +VD+ K V G YN F RV GF+ Q G
Sbjct: 26 GDPHVLLTTSAGNIELELNSQKAPISVDNFLKYVNSGFYNNTTFHRVIPGFMVQ-----G 80
Query: 87 GRSAPMNE-VQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
G NE +Q+ + + E + +++ RG ++M R +D +SA S F I + D LD
Sbjct: 81 GG---FNEQMQQKQPNPPIKNEADNGLRNTRGTIAMARTADQDSATSQFFINITDNAFLD 137
Query: 145 -GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGKV KG + K+ +PT G + +P++ I I S+
Sbjct: 138 HGQRDFGYAVFGKVVKGMDVADKISQVPTHNVGPYQNVPSKPIVILSA 185
>gi|398820042|ref|ZP_10578582.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Bradyrhizobium sp. YR681]
gi|398229300|gb|EJN15382.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Bradyrhizobium sp. YR681]
Length = 154
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV +GF+AQ
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIEGFMAQTG-------C 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + K + EF+ HVRG SM R + P+S S F I DA LD QY V+
Sbjct: 61 P-QGTGTGGSGKKLKAEFNKEPHVRGTTSMARAASPDSGDSQFFICFDDARFLDNQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKVT+G E + K++
Sbjct: 120 GKVTEGMENVDKIK 133
>gi|326386693|ref|ZP_08208314.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208746|gb|EGD59542.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Novosphingobium nitrogenifigens DSM 19370]
Length = 151
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
+ ++V + GD+ +P +AP V+ I +L + G Y+ F RV GF+AQ
Sbjct: 1 MAEEKLVLSLDSGDVVIKLFPDLAPGHVERIKELAKEGFYDGVKFHRVIPGFMAQ----- 55
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG 145
GG P ++ + EF+ HVRG+ SM R P+SA S F I DA LD
Sbjct: 56 GG--CPNGTGMGGSSKPDLKAEFNAHPHVRGVCSMARTQYPHSANSQFFICFDDARFLDR 113
Query: 146 QYAVFGKVTKGDETLRKL-EGLPTRKEGI 173
QY V+G+V G E + L +G P G+
Sbjct: 114 QYTVWGEVESGMEHIDALPKGEPPANPGV 142
>gi|326387410|ref|ZP_08209019.1| peptidylprolyl isomerase [Novosphingobium nitrogenifigens DSM
19370]
gi|326208066|gb|EGD58874.1| peptidylprolyl isomerase [Novosphingobium nitrogenifigens DSM
19370]
Length = 236
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A DP+ + V++ +N G + P AP V+ I L R G Y+ F RV GF
Sbjct: 52 ADESHDPE--NVLVLYLSNGGRVAIRLMPQWAPHHVERIKTLARQGFYDGIIFHRVIDGF 109
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+AQ D P Q + EF+DV H RG +SM R DPNSA S F I+
Sbjct: 110 MAQTGD-------PTGTGQGGSKLPDLDAEFNDVPHGRGTVSMARTDDPNSANSQFFIVF 162
Query: 138 GDAPHLDGQYAVFGKVTKG-DETLRKLEGLP 167
LD +Y FG+V G D R + G P
Sbjct: 163 YPRTALDHKYTNFGRVISGMDAVDRIVRGEP 193
>gi|85716504|ref|ZP_01047475.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Nitrobacter
sp. Nb-311A]
gi|85696693|gb|EAQ34580.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Nitrobacter
sp. Nb-311A]
Length = 154
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ G +
Sbjct: 8 LILETTQGPVTIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIDGFMAQTGCPQG--TG 65
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
Q+++AE F+ HVRG SM R P+S S F I DA L+GQY V+
Sbjct: 66 MGGSGQKLKAE------FNREPHVRGTASMARAQSPDSGDSQFFICFDDASFLNGQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKV +G E + K++
Sbjct: 120 GKVVEGMENVDKIK 133
>gi|421604133|ref|ZP_16046379.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium sp. CCGE-LA001]
gi|404263756|gb|EJZ29190.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium sp. CCGE-LA001]
Length = 154
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTG-------C 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + K + EF+ HVRG SM R ++P+S S F I DA LD QY V+
Sbjct: 61 P-QGTGTGGSGKKLKAEFNKEPHVRGTASMARAANPDSGDSQFFICFDDARFLDNQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKVT+G E + K++
Sbjct: 120 GKVTEGMENVDKIK 133
>gi|384218717|ref|YP_005609883.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium japonicum USDA
6]
gi|354957616|dbj|BAL10295.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium japonicum USDA
6]
Length = 154
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV +GF+AQ
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIEGFMAQTG-------C 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + K + EF+ HVRG SM R + P+S S F I DA LD QY V+
Sbjct: 61 P-QGTGTGGSGKKLKAEFNKEPHVRGTTSMARAASPDSGDSQFFICFDDARFLDNQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKVT+G E + K++
Sbjct: 120 GKVTEGMENVDKIK 133
>gi|392564224|gb|EIW57402.1| cyclophilin-like protein [Trametes versicolor FP-101664 SS1]
Length = 167
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V F T +GDI+ + P+ ++ L G Y+ + R KGF+ Q D G G+
Sbjct: 3 VTFHTTHGDIKVEIFCEAVPKAAENFLALCASGYYDNCLWHRNIKGFMIQTGDPSGSGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
+ E +F++ RGIL+M S P++ S F I PHLDG+Y +
Sbjct: 63 GQSIWGKPFPDEVRTTLKFNN----RGILAMAN-SGPDTNKSQFFITYAKQPHLDGKYTI 117
Query: 150 FGKVTKG-DETLRKLEGLPT--RKEGIFVMPTERITIHSSYYYDTEM 193
FGKV G D TL +E +P + + + T +TIH++ DTE+
Sbjct: 118 FGKVIDGADTTLDAMERVPVNPKNRPLSEIRTSHVTIHANPIADTEL 164
>gi|367471941|ref|ZP_09471538.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
sp. ORS 285]
gi|365275780|emb|CCD84006.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
sp. ORS 285]
Length = 154
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 14/137 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---G 87
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ G G
Sbjct: 8 LILETTQGPVTIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIDGFMAQTGCPQGTGMG 67
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
S K + EF+ HVRG SM R ++P+S S F I DA L+ QY
Sbjct: 68 GSG-----------KKLKAEFNAEPHVRGTTSMARAANPDSGDSQFFICFDDASFLNKQY 116
Query: 148 AVFGKVTKGDETLRKLE 164
V+GKVT+G E + K++
Sbjct: 117 TVWGKVTEGMENVDKIK 133
>gi|407779813|ref|ZP_11127065.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor pacificus pht-3B]
gi|407298432|gb|EKF17572.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Nitratireductor pacificus pht-3B]
Length = 158
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VG 86
+V +T G + P VAP V I +L R Y+ F RV GF+AQ D +G
Sbjct: 11 IVMETTKGKVVIQLLPDVAPGHVARIKELAREEFYDGIVFHRVIDGFMAQTGDPTGTGMG 70
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EFS+ H RG SM R +PNSA S F I AP LD Q
Sbjct: 71 GSDKP-----------DLKAEFSNTVHERGTCSMARSQNPNSANSQFFICFDKAPWLDRQ 119
Query: 147 YAVFGKVTKGDETLRKLE 164
Y+ +G+V +G + + +++
Sbjct: 120 YSAWGQVIEGMDAIDQIK 137
>gi|319404137|emb|CBI77728.1| peptidyl prolyl cis-trans isomerase [Bartonella rochalimae ATCC
BAA-1498]
Length = 201
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 5 IRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
I FLT + + S+ D +V GD+ P +AP+ V I KL G
Sbjct: 7 IFTFLTCFFYLFSFSAAADEH---NILVLSLKNGDVIIQLRPDLAPKHVARIKKLTEEGA 63
Query: 65 YNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRV----EAEKTVVGEFSDVKHVRGILS 119
YN F RV GF+AQ DV G+ ++ +++ V + EFS RG +
Sbjct: 64 YNNVVFHRVIPGFMAQTGDVKFGKKDSVDFDLKNVGKGGSDYSNLPAEFSKQPFKRGAVG 123
Query: 120 MGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
M R D NSA S F I DA L+GQY V G+V KG E + K++
Sbjct: 124 MARSQDLNSANSQFFICFDDATFLNGQYTVVGEVVKGMEVVDKIK 168
>gi|301112695|ref|XP_002998118.1| peptidyl-prolyl cis-trans isomerase ppi1 [Phytophthora infestans
T30-4]
gi|262112412|gb|EEY70464.1| peptidyl-prolyl cis-trans isomerase ppi1 [Phytophthora infestans
T30-4]
Length = 166
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 79/164 (48%), Gaps = 21/164 (12%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
VVF+T G+ Y AP+T +I +L R G YN F R+ K F+ Q D G GR
Sbjct: 13 VVFETTVGEFTMELYTEHAPRTCWNIAELARRGYYNNTIFHRIIKDFMIQGGDPTGTGRG 72
Query: 90 APMNEVQRVEAEKTVVGEFSD-----VKHV-RGILSMGRYSDPNSAASSFSILLGDAPHL 143
E +F D +KH G+LSM S PN+ S F I L P L
Sbjct: 73 ----------GESIYGAKFDDEINKELKHTGAGVLSMAN-SGPNTNGSQFFITLAPTPWL 121
Query: 144 DGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSY 187
DG++ VFG+++ G + ++++ +PT G P E I I +Y
Sbjct: 122 DGKHTVFGRISSGMKVIQRMGMVPT---GANDRPREEIHIKRAY 162
>gi|126735927|ref|ZP_01751671.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Roseobacter
sp. CCS2]
gi|126714484|gb|EBA11351.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Roseobacter
sp. CCS2]
Length = 168
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ GD+ P VAP V + +L R G Y+ F RV GF+AQ DV G
Sbjct: 11 IIMTLKDGDVIIELLPDVAPAHVARMKELARAGKYDNVCFHRVIDGFMAQTGDVANGNME 70
Query: 91 PMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ R + V EFS + H RG + R +PNSA S F I D L+GQ
Sbjct: 71 DNFNIGRAGTGGSDMPDVPAEFSKIPHARGSIGAARSQNPNSANSQFFINFKDNDFLNGQ 130
Query: 147 YAVFGKVTKGDETLRKL 163
Y V+G+V G E + +
Sbjct: 131 YTVYGQVVSGMEHVDAI 147
>gi|395779794|ref|ZP_10460263.1| hypothetical protein MCW_00350 [Bartonella washoensis 085-0475]
gi|395420169|gb|EJF86454.1| hypothetical protein MCW_00350 [Bartonella washoensis 085-0475]
Length = 191
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 2 LNVIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
L V+ + ++ ++ +D S+ +V G++ +AP+ V I +L
Sbjct: 3 LRVLAVLTSVFCFFSLSAVADD----SSVLVLSLKKGNVVIRLRSDLAPKHVAQIKRLTE 58
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMN-EVQRVEAEKT----VVGEFSDVKHVRG 116
G YN F RV GF+AQ DV G+ + +++RV + + EFS RG
Sbjct: 59 EGAYNNVVFHRVIPGFMAQTGDVKFGKKGSADFDLKRVGTGGSNYPNIPAEFSKQPFKRG 118
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176
+ M R DP+SA S F I DA L+GQY V G+V KG + + +++ T G
Sbjct: 119 TVGMARSQDPHSANSQFFICFSDADFLNGQYTVVGEVIKGMDVVDQIKKGTTSNNGSVTD 178
Query: 177 P 177
P
Sbjct: 179 P 179
>gi|404401931|ref|ZP_10993515.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas fuscovaginae
UPB0736]
Length = 188
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
+ V+ +T G IE P AP + + V G YN F RV GF+ Q GG
Sbjct: 27 APHVLLETTNGSIEIELDPVKAPISTKNFLSYVDSGFYNNTIFHRVIPGFMVQG----GG 82
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDA----PH 142
+A MN+ E + E S+ H VRG L+M R SDPNSA S F I + D P
Sbjct: 83 FTAQMNQKPTKEP---IRNEASNGLHNVRGTLAMARTSDPNSATSQFFINVKDNDFLDPG 139
Query: 143 LDGQYAVFGKVTKGDETLRKL-EGLPTRKEGIFVMPTERITIHSSYYYD 190
D YAVFGKV KG + + + T K G+ +P + + I S+ D
Sbjct: 140 RDAGYAVFGKVVKGMDVVDIIVNSQTTSKGGMSDVPADPVFIKSAKRID 188
>gi|241204660|ref|YP_002975756.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858550|gb|ACS56217.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 190
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQSADHY----LTIQLKNGPVVIQLMPEVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIDGFMAQTGDVKYGNMEKGFDASLAGTGSSDMPDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
DPNSA S F I+ + L+GQY V GKV G E + K++
Sbjct: 128 DPNSANSQFFIMFAEGSFLNGQYTVVGKVVSGMENVDKIK 167
>gi|374575660|ref|ZP_09648756.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Bradyrhizobium sp. WSM471]
gi|386395146|ref|ZP_10079924.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Bradyrhizobium sp. WSM1253]
gi|374423981|gb|EHR03514.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Bradyrhizobium sp. WSM471]
gi|385735772|gb|EIG55968.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Bradyrhizobium sp. WSM1253]
Length = 154
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTG-------C 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + K + EF+ HVRG SM R + P+S S F I+ DA LD QY V+
Sbjct: 61 P-QGTGTGGSGKKLKAEFNKEPHVRGTTSMARAASPDSGDSQFFIVFDDARFLDNQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKVT+G E + K++
Sbjct: 120 GKVTEGMENVDKIK 133
>gi|237807571|ref|YP_002892011.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Tolumonas
auensis DSM 9187]
gi|237499832|gb|ACQ92425.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Tolumonas
auensis DSM 9187]
Length = 184
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
RV QTN G I AP+TV + V G YN + F RV GFVAQ GG +
Sbjct: 23 RVEMQTNLGSIVVELEAEKAPKTVANFLSYVDEGSYNNSLFHRVIPGFVAQ----GGGYN 78
Query: 90 A---PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
+ P+ VE E T + + + RG L+M R SDPNSA F L D LD
Sbjct: 79 SSFTPLPTHTPVENEST-----NGLSNRRGTLAMARMSDPNSATRQFYFNLNDNASLDAT 133
Query: 147 ----YAVFGKVTKGDETLRKLEGLPT 168
Y VFG V G E L K+ PT
Sbjct: 134 VQPGYTVFGTVVSGMEVLEKIADEPT 159
>gi|6466229|gb|AAF12845.1|AF203881_18 peptidyl prolyl cis-trans isomerase [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 213
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 86/194 (44%), Gaps = 24/194 (12%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VGGRSAPMN 93
G + P AP++V+ I LVR G YN F RV +GF+AQ D GG S P
Sbjct: 15 GRVVIQLRPDKAPKSVERIKILVREGFYNGLRFHRVIEGFMAQTGDPKGDGSGGSSLP-- 72
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ EF+D+ HVRG +SM R + +SA S F I+ LDG+Y G+V
Sbjct: 73 ---------NLPAEFNDMPHVRGEVSMARAQEKDSANSQFFIVYQPTFSLDGEYTPIGRV 123
Query: 154 TKGDETLRKLE-GLPTRKEGIFVMPTERITIHSSYYYDTEME----ICEKERSVLKRRLT 208
G E + +E G P I V R +I S + E EK+ ++
Sbjct: 124 VSGMEYVDAVEKGEPPAHPSIIV----RASIGSDKIHPPTTEEVKAAVEKQEAINLAEQQ 179
Query: 209 ASVIEIERQRMKCF 222
E+ R M+ F
Sbjct: 180 KQEEEVRRNAMRSF 193
>gi|389877965|ref|YP_006371530.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Tistrella
mobilis KA081020-065]
gi|388528749|gb|AFK53946.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Tistrella
mobilis KA081020-065]
Length = 159
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V ++G + P +AP V + +L R G Y+ F RV +GF+AQ D G
Sbjct: 12 LVMTLDHGTVVIRLRPDLAPGHVARMKELAREGFYDGIVFHRVIEGFMAQTGDPTG---- 67
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
R + K + EF+ RG++ R DP+SA S F I A LDGQY V+
Sbjct: 68 ----TGRGGSGKKLKAEFTKTAFERGVIGAARTPDPDSADSQFFICFAPARFLDGQYTVW 123
Query: 151 GKVTKGDETLRKL-EGLPTRK 170
G+V +G E + K+ G P RK
Sbjct: 124 GEVVEGMEAIDKIARGEPPRK 144
>gi|170742582|ref|YP_001771237.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Methylobacterium sp. 4-46]
gi|168196856|gb|ACA18803.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Methylobacterium sp. 4-46]
Length = 153
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T G + P +AP V+ I L G Y+ F RV GF+AQ D G +
Sbjct: 7 LVMETTKGRVVIQLRPDLAPNHVERIRTLAEQGFYDGVPFHRVIDGFMAQTGDPTGTGTG 66
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+++ ++AE F+ HVRG SM R S P+SA S F I DAP L+ QY V+
Sbjct: 67 -GSDLPDLKAE------FNAEPHVRGTCSMARTSFPHSANSQFFICFADAPFLNRQYTVW 119
Query: 151 GKVTKGDETLRKLE-GLPTR 169
GKVT+G E + +++ G P R
Sbjct: 120 GKVTEGMEVVDQIKRGEPVR 139
>gi|412992243|emb|CCO19956.1| CYP [Bathycoccus prasinos]
Length = 653
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 15 IGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVD 74
+G A+ +L S V TN GD+ F +P P+TV++ R G Y+ F RV
Sbjct: 485 LGGANGSASNRLPSL-VTLHTNIGDVSFKLFPKECPKTVENFTTHCRNGYYDDVIFHRVI 543
Query: 75 KGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVR-GILSMGRYSDPNSAASSF 133
KGF+ Q D +G + + + E E + D++H R G+LS + PN+ S F
Sbjct: 544 KGFMIQTGDPLGDGTGGTS-IWGSEFEDEIN---RDLRHDRAGVLSSAN-AGPNTNGSQF 598
Query: 134 SILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRK 170
I P LDG+++VFG+V+KG + + K+E L K
Sbjct: 599 FITTVPTPWLDGKHSVFGRVSKGMDIVNKIENLKVDK 635
>gi|149243301|pdb|2POE|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cyclophilin
Type Peptidyl-Prolyl Cis-Trans Isomerase Cgd2_1660
gi|152149470|pdb|2QER|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cyclophilin
Type Peptidyl- Prolyl Cis-Trans Isomerase Cgd2_1660 In
The Presence Of Dipeptide Ala-Pro
Length = 185
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 12/182 (6%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
+S +E+ R++ TNYGD++F + S P+ + L G Y F + KGF
Sbjct: 8 SSGRENLYFQGVRII--TNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGF 65
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSM---GRYSDPNSAASSF 133
+ Q D G + R ++ + ++K+ RGILSM G PN+ S F
Sbjct: 66 IIQGGDPTGTGKGGESIYGRYFDDEI----YPELKYDRRGILSMASKGASKKPNTNGSQF 121
Query: 134 SILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRK--EGIFVMPTERITIHSSYYYDT 191
I P L+G+Y +FGK+ G ETL LE P+ K + I + + I IHS+ D
Sbjct: 122 FITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIHSNPIADQ 181
Query: 192 EM 193
E+
Sbjct: 182 EI 183
>gi|296490464|tpg|DAA32577.1| TPA: peptidylprolyl isomerase (cyclophilin)-like 3 [Bos taurus]
Length = 168
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 29 ARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-G 87
A V T+ GDI+ + T+ + L YN F R KGF+ Q D G G
Sbjct: 8 ASVTLHTDVGDIKIEVFCERXXXTLQNFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTG 67
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
R ++ E E + E+ +KH VRG++SM + PN+ S F I G PHLD +
Sbjct: 68 RGGNSIWGKKFEDEYS---EY--LKHSVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMK 121
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
Y VFGKV G ETL +LE LP ++ + + + ITIH++
Sbjct: 122 YTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHAN 164
>gi|198424585|ref|XP_002124966.1| PREDICTED: similar to peptidylprolyl isomerase-like 3 [Ciona
intestinalis]
Length = 164
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ P+ ++ L G Y+ N F R KGF+ Q D G G+
Sbjct: 3 VTLHTDLGDIKMELNCEQTPKAAENFLALCASGYYDDNIFHRNIKGFMVQTGDPSGTGKK 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAV 149
Q + E +V + RG++SM S PN+ S F I G PH+D +Y +
Sbjct: 63 GTSIWKQHFDDE--IVDSLR--HNARGVVSMAN-SGPNTNGSQFFITYGKQPHIDMKYTI 117
Query: 150 FGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
FG+V G+E L LE +P ++ + + +R+TIH++
Sbjct: 118 FGRVIDGNEVLDDLEKVPVNEKTYRPLRDVKIQRVTIHAN 157
>gi|227112837|ref|ZP_03826493.1| peptidyl-prolyl cis-trans isomerase B (rotamase B) [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|227329461|ref|ZP_03833485.1| peptidyl-prolyl cis-trans isomerase B (rotamase B) [Pectobacterium
carotovorum subsp. carotovorum WPP14]
gi|403059412|ref|YP_006647629.1| peptidyl-prolyl cis-trans isomerase B [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402806738|gb|AFR04376.1| peptidyl-prolyl cis-trans isomerase B (rotamase B) [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 164
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ TN+GDI + AP TV++ R G Y+ F RV GF+ Q GG A
Sbjct: 2 ITLHTNHGDIVINTFADKAPVTVENFLNYCRSGFYDNTIFHRVINGFMIQ-----GGGFA 56
Query: 91 PMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHL------ 143
P + + E T+ E ++ +K+ RG L+M R +DP+SA + F I L D L
Sbjct: 57 P--GMDQKETNATIKNEANNGLKNTRGTLAMARTNDPHSATAQFFINLVDNDFLNFRSER 114
Query: 144 -DGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITI 183
DG Y VF +VT+G + + K++G+ T + G+ +P E + I
Sbjct: 115 ADGWGYCVFAEVTEGMDVVDKIKGVATGRSGMHQDVPKEDVVI 157
>gi|84503373|ref|ZP_01001442.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oceanicola
batsensis HTCC2597]
gi|84388283|gb|EAQ01234.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Oceanicola
batsensis HTCC2597]
Length = 168
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G + P VAPQ D + +L R G Y+ F RV GF+AQ DV + A
Sbjct: 11 ILMELKDGTVTIELLPDVAPQHADRMKELARAGAYDNVAFHRVIDGFMAQTGDV---QHA 67
Query: 91 PMNEVQRVEAEKT-------VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
M + T + EFS + H RG L R +PNSA S F I D L
Sbjct: 68 NMEQDYNPRMAGTGGSDLPDLPAEFSKLPHDRGTLGAARSQNPNSANSQFFINFSDNHFL 127
Query: 144 DGQYAVFGKVTKGDE 158
+GQY V+G+V +G E
Sbjct: 128 NGQYTVYGRVIEGME 142
>gi|83954330|ref|ZP_00963050.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Sulfitobacter sp. NAS-14.1]
gi|83841367|gb|EAP80537.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Sulfitobacter sp. NAS-14.1]
Length = 168
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G + P VAP+ V+ + +L R G Y+ F RV +GF+AQ DV G
Sbjct: 11 ILMELKGGTVTIQLLPDVAPKHVERMKELARAGKYDNVAFHRVIEGFMAQTGDVANGN-- 68
Query: 91 PMNEVQRVEAEKT-------VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
M + + A T + EFS V H RG + R ++P+SA S F I D L
Sbjct: 69 -MEDNFNLRAAGTGGSDMPNLPAEFSKVPHARGSIGAARSANPDSANSQFFINFKDNDFL 127
Query: 144 DGQYAVFGKVTKGDE 158
+GQY V+G+V G E
Sbjct: 128 NGQYTVYGQVISGME 142
>gi|99080927|ref|YP_613081.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Ruegeria sp.
TM1040]
gi|99037207|gb|ABF63819.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Ruegeria sp.
TM1040]
Length = 182
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGR-SAPMNEVQ 96
G I VAP V+ I L G Y+ F RV +GF+AQ DV GR + M
Sbjct: 31 GTIVIDLLEDVAPNHVEQIAALAAEGQYDGVVFHRVIQGFMAQTGDVQNGRLGSDMRYAG 90
Query: 97 RVEAEK-TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+++ + EFSDV RG++ M R DP+SA S F I+ + L+GQY V G+VT+
Sbjct: 91 TGGSDRPDLAAEFSDVPFDRGVVGMARSQDPDSANSQFFIMFDEGHFLNGQYTVVGRVTE 150
Query: 156 GDETLRKLE 164
G E + +++
Sbjct: 151 GMEIVDQIK 159
>gi|320032323|gb|EFW14277.1| peptidyl-prolyl cis-trans isomerase [Coccidioides posadasii str.
Silveira]
Length = 630
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ----VADVVG 86
+ T GDI +PSVAP+ V++ R G YN F RV + F+ Q + D G
Sbjct: 481 AILHTTMGDIHLRLFPSVAPKAVENFVTHARNGYYNNTIFHRVIRKFMIQGGDPLGDGTG 540
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G S E + EFS +KH + LSM + PN+ S F I P LDG
Sbjct: 541 GESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNGSQFFITTEKTPWLDG 590
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKE 171
+ +FG+ KG + + ++E + T KE
Sbjct: 591 HHTIFGRAVKGLDVVHRIENVKTHKE 616
>gi|358387156|gb|EHK24751.1| hypothetical protein TRIVIDRAFT_30221 [Trichoderma virens Gv29-8]
Length = 625
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
+ G+A ++ T YGD+ +P AP+ V++ + G YN F RV + F+ Q D
Sbjct: 471 ETGNAAII-HTTYGDVHIRLFPDAAPKAVENFVTHAKRGYYNNTIFHRVIRKFMIQGGDP 529
Query: 85 VGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
+G + + R EFS +KH + + PN+ AS F I P LD
Sbjct: 530 LGDGTGGESIWGR-----DFEDEFSSLKHDKPYTVSMANAGPNTNASQFFITTEKTPWLD 584
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
G++ +FG+ T+G + + K+E T KE P E I I
Sbjct: 585 GKHTIFGRATQGLDVIHKIENTRTHKE----KPEEDIKI 619
>gi|221056052|ref|XP_002259164.1| Cyclophilin [Plasmodium knowlesi strain H]
gi|193809235|emb|CAQ39937.1| Cyclophilin, putative [Plasmodium knowlesi strain H]
Length = 167
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ TNYGDI+ + P+T + L G Y+ F R KGF Q D
Sbjct: 3 LTLHTNYGDIKIELFCYEVPKTCKNFLALCASGYYDNTKFHRNIKGFAIQGGD------- 55
Query: 91 PMNEVQRVEA--EKTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
P N + E+ K EF S +KH RGI+SM PN+ S F I PHL+G
Sbjct: 56 PTNTGKGGESIFGKYFDDEFQSTLKHDKRGIVSMANKGKPNTNGSQFFITYSRQPHLNGV 115
Query: 147 YAVFGKVTKGDETLRKLEGLPT--RKEGIFVMPTERITIHSS 186
Y VFGKV G + L LE P + + + + E ITIH++
Sbjct: 116 YPVFGKVIDGMDVLSVLENEPVGEKHKPVKDILIESITIHAN 157
>gi|334140102|ref|YP_004533302.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Novosphingobium sp. PP1Y]
gi|359399490|ref|ZP_09192492.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Novosphingobium pentaromativorans US6-1]
gi|333938126|emb|CCA91484.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Novosphingobium sp. PP1Y]
gi|357599080|gb|EHJ60796.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Novosphingobium pentaromativorans US6-1]
Length = 155
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD++ P +AP V+ I +L G Y+ F RV GF+AQ GG P
Sbjct: 17 GDVKIKLRPDLAPGHVERIKELTGEGFYDGVKFHRVIPGFMAQ-----GG--CPQGTGMG 69
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ + EF+ HVRG+ SM R S P+SA S F I DA LD QY V+G+V +G
Sbjct: 70 GSDKPDLQAEFNAEPHVRGVCSMARTSYPHSANSQFFICFDDATFLDKQYTVWGQVVEGM 129
Query: 158 ETLRKL-EGLPTRKEGIFVMPT 178
E + L +G P R+ G V T
Sbjct: 130 EHVDALPKGEPPREPGKIVKAT 151
>gi|401401891|ref|XP_003881119.1| putative cyclophilin [Neospora caninum Liverpool]
gi|325115531|emb|CBZ51086.1| putative cyclophilin [Neospora caninum Liverpool]
Length = 165
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +TN GD++ Y AP+T + L YN F R KGF Q D G
Sbjct: 3 VTIKTNLGDLKAELYCQQAPKTCKNFLALCASDYYNGTRFHRNIKGFAIQGGDPTGTGKG 62
Query: 91 PMNEVQRVEAEKTVVGEFSD-----VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
+ G F D +KH RGILSM PN+ S F I PHL+
Sbjct: 63 ---------GDSIYGGLFEDEFVSSLKHDRRGILSMANQGKPNTNGSQFFITYCRQPHLN 113
Query: 145 GQYAVFGKVTKGDETLRKLE----GLPTRKEGIFVMPTERITIHSS 186
G Y+VFG++ G +TL K+E G R E ++ E++ IH++
Sbjct: 114 GVYSVFGRLIDGMDTLDKMEREPVGRKNRPENDIII--EQVIIHAN 157
>gi|312881559|ref|ZP_07741340.1| hypothetical protein VIBC2010_03110 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370762|gb|EFP98233.1| hypothetical protein VIBC2010_03110 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 181
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 20/188 (10%)
Query: 4 VIRIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLG 63
++RI L + L+ + +V F+TN G+ AP+TV + V+ G
Sbjct: 1 MLRIALACLVLLSHVA------FAGQKVQFETNLGNFVVELNNEKAPKTVANFLSYVKDG 54
Query: 64 CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGR 122
Y + F RV F+AQ GG M ++ ++ +V E S+ +K+ + ++M R
Sbjct: 55 SYVGSIFHRVIPNFMAQG----GGFDKSMKPLKTLDP---IVNEASNGLKNNQATIAMAR 107
Query: 123 YSDPNSAASSFSILLGDAPHLDGQ-----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-M 176
S+PNSA F I L D LD YAVFGKV KG ET++K+ + T+ G + +
Sbjct: 108 TSNPNSATRQFFINLKDNHFLDHSTGKDGYAVFGKVIKGFETIQKMSTIKTQSVGRYQDV 167
Query: 177 PTERITIH 184
P+E ITI
Sbjct: 168 PSETITIQ 175
>gi|392869109|gb|EAS27602.2| peptidyl-prolyl cis-trans isomerase cypE [Coccidioides immitis RS]
Length = 630
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ----VADVVG 86
+ T GDI +PSVAP+ V++ R G YN F RV + F+ Q + D G
Sbjct: 481 AILHTTMGDIHLRLFPSVAPKAVENFVTHARNGYYNNTIFHRVIRKFMIQGGDPLGDGTG 540
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G S E + EFS +KH + LSM + PN+ S F I P LDG
Sbjct: 541 GESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNGSQFFITTEKTPWLDG 590
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKE 171
+ +FG+ KG + + ++E + T KE
Sbjct: 591 HHTIFGRAVKGLDVVHRIENVKTHKE 616
>gi|336247517|ref|YP_004591227.1| peptidyl-prolyl cis-trans isomerase A [Enterobacter aerogenes KCTC
2190]
gi|444354371|ref|YP_007390515.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)
[Enterobacter aerogenes EA1509E]
gi|334733573|gb|AEG95948.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Enterobacter
aerogenes KCTC 2190]
gi|443905201|emb|CCG32975.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)
[Enterobacter aerogenes EA1509E]
Length = 189
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +VD+ K V G YN F RV GF+ Q G
Sbjct: 26 GDPHVLLTTSAGNIELELNSQKAPISVDNFLKYVNSGFYNNTTFHRVIPGFMVQ-----G 80
Query: 87 GRSAPMNE-VQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
G NE +Q+ + + E + +++ RG ++M R +D +SA S F I + D LD
Sbjct: 81 GG---FNEQMQQKQPNPPIKNEADNGLRNTRGTIAMARTADQDSATSQFFINVADNAFLD 137
Query: 145 -GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGKV KG + K+ +PT G + +P++ + I S+
Sbjct: 138 HGQRDFGYAVFGKVVKGMDVADKISQVPTHNVGPYQNVPSKPVVILSA 185
>gi|374370927|ref|ZP_09628916.1| peptidyl-prolyl cis-trans isomerase A [Cupriavidus basilensis OR16]
gi|373097484|gb|EHP38616.1| peptidyl-prolyl cis-trans isomerase A [Cupriavidus basilensis OR16]
Length = 194
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 25/175 (14%)
Query: 25 QLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV 84
Q + RV F T+ G YP AP+TV + + V+ G Y+ F RV GF+ Q
Sbjct: 28 QTKTERVQFVTSAGKFTLEVYPDAAPKTVANFMEYVKSGFYSGTIFHRVINGFMVQ---- 83
Query: 85 VGG------RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLG 138
GG + P +EA+ + +K+ G ++M R SDPNSA + F I +
Sbjct: 84 -GGGFDRDMKQKPTRAAIPLEAQ-------NGLKNKAGTVAMARTSDPNSATAQFFINVV 135
Query: 139 DA-----PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
D P DG YAVFGKV +G +T+ K++ PT G + +P I I S+
Sbjct: 136 DNSSLDYPSPDGNGYAVFGKVVEGMDTVDKMKNAPTTSYGPMRNVPATPIVIESA 190
>gi|303323927|ref|XP_003071951.1| hypothetical protein CPC735_011240 [Coccidioides posadasii C735
delta SOWgp]
gi|240111661|gb|EER29806.1| hypothetical protein CPC735_011240 [Coccidioides posadasii C735
delta SOWgp]
Length = 630
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ----VADVVG 86
+ T GDI +PSVAP+ V++ R G YN F RV + F+ Q + D G
Sbjct: 481 AILHTTMGDIHLRLFPSVAPKAVENFVTHARNGYYNNTIFHRVIRKFMIQGGDPLGDGTG 540
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G S E + EFS +KH + LSM + PN+ S F I P LDG
Sbjct: 541 GESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNGSQFFITTEKTPWLDG 590
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKE 171
+ +FG+ KG + + ++E + T KE
Sbjct: 591 HHTIFGRAVKGLDVVHRIENVKTHKE 616
>gi|146340924|ref|YP_001205972.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium sp. ORS 278]
gi|146193730|emb|CAL77747.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
sp. ORS 278]
Length = 154
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 14/137 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---G 87
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ G G
Sbjct: 8 LILETTQGPVTIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIDGFMAQTGCPQGTGMG 67
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
S K + EF+ HVRG SM R ++P+S S F I DA LD QY
Sbjct: 68 GSG-----------KKLKAEFNAEPHVRGTASMARAANPDSGDSQFFICFDDARFLDKQY 116
Query: 148 AVFGKVTKGDETLRKLE 164
V+GKVT+G + + K++
Sbjct: 117 TVWGKVTEGMDNVDKIK 133
>gi|27365168|ref|NP_760696.1| peptidyl-prolyl cis-trans isomerase ppiA [Vibrio vulnificus CMCP6]
gi|27361315|gb|AAO10223.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor [Vibrio
vulnificus CMCP6]
Length = 181
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
L +V F+T+ G+ AP +V++ K V+ G Y + F R+ GF+AQ
Sbjct: 17 LAGPKVEFETSLGNFTVELNEEKAPISVENFVKYVKDGSYVGSQFHRIIPGFMAQ----G 72
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
GG MN R+ + + E S+ +K+V G ++M R DPNSA F I L D LD
Sbjct: 73 GGFDEKMN---RLPSYAPIKNEASNGLKNVTGSIAMARTQDPNSATRQFFINLVDNEFLD 129
Query: 145 -----GQYAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITI 183
YAVFG+VT+G + ++++ PT+ +G +P E I I
Sbjct: 130 YDLQPPGYAVFGQVTEGFDVIQQMASKPTKSQGYMRDIPVEPIVI 174
>gi|307947101|ref|ZP_07662436.1| putative peptidyl-prolyl cis-trans isomerase [Roseibium sp.
TrichSKD4]
gi|307770765|gb|EFO29991.1| putative peptidyl-prolyl cis-trans isomerase [Roseibium sp.
TrichSKD4]
Length = 179
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G + P +AP V+ I KL R G Y+ F RV GF+AQ D G M Q
Sbjct: 39 GRVTLQLRPDLAPNHVERIKKLTRDGFYDGIVFHRVIDGFMAQTGDPTG---TGMGGSQ- 94
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
E + EF+ + RG+L M R +PNSA S F I+ D L+GQY V+G++ G
Sbjct: 95 ---EPDLKAEFTRTRFKRGVLGMARAGNPNSANSQFFIMFADGDWLNGQYTVWGEIVGGM 151
Query: 158 E 158
E
Sbjct: 152 E 152
>gi|91077922|ref|XP_974063.1| PREDICTED: similar to AGAP009996-PA [Tribolium castaneum]
Length = 172
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
L + V T+ G+I+ + P+T ++ L Y N F R KGF+ Q D
Sbjct: 8 LPARSVTLHTDLGNIKMELFCESCPKTCENFLALCASDYYTGNLFHRNIKGFIVQTGDPT 67
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHL 143
G + +R + EF + +KH RGI+SM + PN+ S F I G PHL
Sbjct: 68 GTGKGGTSIWERKFED-----EFKEQLKHTARGIVSMAN-NGPNTNGSQFFITYGAHPHL 121
Query: 144 DGQYAVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
D +Y +FGKV G ETL +LE +P + + + ITIH++
Sbjct: 122 DLKYTIFGKVIDGFETLDELEKVPVNPKNYRPVNDIRINSITIHAN 167
>gi|301596854|ref|ZP_07241862.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB059]
gi|421200875|ref|ZP_15658034.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acinetobacter baumannii OIFC109]
gi|421645178|ref|ZP_16085648.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acinetobacter baumannii IS-235]
gi|395562907|gb|EJG24560.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acinetobacter baumannii OIFC109]
gi|408503464|gb|EKK05230.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acinetobacter baumannii IS-235]
Length = 169
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 7 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 63 NMQEKSTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 120
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 121 GYAVFGKVVKGMDVVDRIVQAPTSNYGM 148
>gi|119172621|ref|XP_001238895.1| hypothetical protein CIMG_09917 [Coccidioides immitis RS]
Length = 565
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ----VADVVG 86
+ T GDI +PSVAP+ V++ R G YN F RV + F+ Q + D G
Sbjct: 416 AILHTTMGDIHLRLFPSVAPKAVENFVTHARNGYYNNTIFHRVIRKFMIQGGDPLGDGTG 475
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLGDAPHLDG 145
G S E + EFS +KH + LSM + PN+ S F I P LDG
Sbjct: 476 GESIWGGEFE---------DEFSSLKHDKPYTLSMAN-AGPNTNGSQFFITTEKTPWLDG 525
Query: 146 QYAVFGKVTKGDETLRKLEGLPTRKE 171
+ +FG+ KG + + ++E + T KE
Sbjct: 526 HHTIFGRAVKGLDVVHRIENVKTHKE 551
>gi|453065982|gb|EMF06939.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Serratia
marcescens VGH107]
Length = 188
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 19/188 (10%)
Query: 10 TLITLIGTAS-SQEDPQL--GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYN 66
TL+T + S S P L G V+ T+ G+IE AP + + V G YN
Sbjct: 5 TLVTFVALCSLSAVAPALAAGETHVMLTTSAGNIELALDSQKAPVSTQNFVDYVNSGYYN 64
Query: 67 TNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD--VKHVRGILSMGRYS 124
F RV GF+ Q GG +A M + ++ K + +D ++++RG +SM R +
Sbjct: 65 NTIFHRVIPGFMIQ----GGGFTADMQQ----KSTKAPIKNEADNGLRNLRGTISMARTA 116
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
D +SA S F + + D LD GQ YAVFGKV KG + + K+ +PT G + +PT
Sbjct: 117 DKDSATSQFFLNVADNAFLDHGQRDFGYAVFGKVVKGMDVVDKIAQVPTGNVGPYQNVPT 176
Query: 179 ERITIHSS 186
+ + I S+
Sbjct: 177 KPVVILSA 184
>gi|295662497|ref|XP_002791802.1| peptidylprolyl isomerase domain and WD repeat-containing protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226279454|gb|EEH35020.1| peptidylprolyl isomerase domain and WD repeat-containing protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 632
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 24 PQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVAD 83
P + T GDI +PS AP+TV + R G YN F RV + F+ Q D
Sbjct: 476 PAEAGTSAILHTTLGDIHLRLFPSAAPKTVVNFVTHARNGYYNNTTFHRVIRKFMIQAGD 535
Query: 84 VVG----GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASSFSILLG 138
+G G S E + EFS ++H + LSM + PN+ S F I
Sbjct: 536 PLGDGTGGESIWGGEFE---------DEFSTLRHDKPYTLSMAN-AGPNTNGSQFFITTE 585
Query: 139 DAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
P LDG++ +FG+ KG + + K+E + T KE
Sbjct: 586 KTPWLDGKHTIFGRAVKGLDVVHKIENVKTYKE 618
>gi|194098945|ref|YP_002002010.1| putative peptidyl-prolyl cis-trans isomerase A [Neisseria
gonorrhoeae NCCP11945]
gi|240013867|ref|ZP_04720780.1| putative peptidyl-prolyl cis-trans isomerase A [Neisseria
gonorrhoeae DGI18]
gi|240016310|ref|ZP_04722850.1| putative peptidyl-prolyl cis-trans isomerase A [Neisseria
gonorrhoeae FA6140]
gi|240121437|ref|ZP_04734399.1| putative peptidyl-prolyl cis-trans isomerase A [Neisseria
gonorrhoeae PID24-1]
gi|268596571|ref|ZP_06130738.1| peptidyl-prolyl cis-trans isomerase A [Neisseria gonorrhoeae FA19]
gi|268603966|ref|ZP_06138133.1| peptidyl-prolyl cis-trans isomerase A [Neisseria gonorrhoeae PID1]
gi|268682429|ref|ZP_06149291.1| peptidyl-prolyl cis-trans isomerase A [Neisseria gonorrhoeae
PID332]
gi|291043523|ref|ZP_06569239.1| peptidyl-prolyl cis-trans isomerase A [Neisseria gonorrhoeae DGI2]
gi|193934235|gb|ACF30059.1| putative peptidyl-prolyl cis-trans isomerase A [Neisseria
gonorrhoeae NCCP11945]
gi|268550359|gb|EEZ45378.1| peptidyl-prolyl cis-trans isomerase A [Neisseria gonorrhoeae FA19]
gi|268588097|gb|EEZ52773.1| peptidyl-prolyl cis-trans isomerase A [Neisseria gonorrhoeae PID1]
gi|268622713|gb|EEZ55113.1| peptidyl-prolyl cis-trans isomerase A [Neisseria gonorrhoeae
PID332]
gi|291011986|gb|EFE03975.1| peptidyl-prolyl cis-trans isomerase A [Neisseria gonorrhoeae DGI2]
Length = 185
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
F T++T + A S P + + RV+ +T+ G+I S A +TV + + R G Y+
Sbjct: 5 FKTVLTALLLAVSL--PSMAATRVLMETDMGNIRLVLDESKASKTVANFVRYARKGFYDN 62
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDP 126
F RV GFV Q G + VQ+ +K V E + +K+ G ++M R +DP
Sbjct: 63 TIFHRVIGGFVIQ------GGGLTEDLVQKA-TDKAVANESGNGLKNTVGTIAMARTADP 115
Query: 127 NSAASSFSILLGDAPHLD---GQYA--VFGKVTKGDETLRKLEGLPTRKEGIF 174
+SAA+ F I L D LD GQY VFG+V G +T+ K+ + T G++
Sbjct: 116 DSAAAQFFINLADNGSLDYKNGQYGYTVFGRVESGMDTVSKIARVKTATRGLY 168
>gi|445407137|ref|ZP_21432231.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-57]
gi|444781104|gb|ELX05026.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-57]
Length = 185
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKSTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITI 183
YAVFGKV KG + + ++ PT G+ +P + I I
Sbjct: 137 GYAVFGKVVKGMDVVDRIVQAPTSNYGMHQNVPKQPIKI 175
>gi|329113565|ref|ZP_08242345.1| Putative peptidyl-prolyl cis-trans isomerase [Acetobacter pomorum
DM001]
gi|421849644|ref|ZP_16282621.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus NBRC
101655]
gi|421853426|ref|ZP_16286100.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|326697087|gb|EGE48748.1| Putative peptidyl-prolyl cis-trans isomerase [Acetobacter pomorum
DM001]
gi|371459588|dbj|GAB27824.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus NBRC
101655]
gi|371478361|dbj|GAB31303.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 172
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 37 YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQ 96
+G + P +AP+ + I L G Y+ F RV GF+AQ D G +++
Sbjct: 25 HGRVIIKLRPDLAPKAAERIRTLAAEGFYDNVPFHRVIPGFMAQGGDPTG-TGMHGSKLP 83
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ AE T +F RG + M R SDPNSA S F I+ +PHLDGQY + G+V +G
Sbjct: 84 DLPAEFTNKAKFE-----RGTIGMARTSDPNSANSQFFIMFEPSPHLDGQYTIVGEVIEG 138
Query: 157 DETLRKLE 164
E + K++
Sbjct: 139 MENVDKIK 146
>gi|50122076|ref|YP_051243.1| peptidyl-prolyl cis-trans isomerase B [Pectobacterium atrosepticum
SCRI1043]
gi|49612602|emb|CAG76052.1| peptidyl-prolyl cis-trans isomerase B [Pectobacterium atrosepticum
SCRI1043]
Length = 164
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ TN+GDI + AP TV++ R G Y+ F RV GF+ Q GG +A
Sbjct: 2 ITLHTNHGDIVINTFADKAPVTVENFLNYCRSGFYDNTIFHRVINGFMIQ----GGGFAA 57
Query: 91 PMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHL------ 143
M++ E T+ E ++ +K+ RG L+M R +DP+SA + F I L D L
Sbjct: 58 GMDQ---KETNATIKNEANNGLKNTRGTLAMARTNDPHSATAQFFINLIDNDFLNFRSER 114
Query: 144 -DGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITI 183
DG Y VF +VT+G + + K++G+ T + G+ +P E + I
Sbjct: 115 ADGWGYCVFAEVTEGMDVVDKIKGVATGRSGMHQDVPKEDVVI 157
>gi|390453428|ref|ZP_10238956.1| peptidyl-prolyl cis-trans isomerase B [Paenibacillus peoriae KCTC
3763]
Length = 144
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNE 94
N G +E F+P AP TV + KL G YN F RV GFVAQ +G G P
Sbjct: 10 NGGIVEIDFFPEEAPNTVANFEKLANSGFYNGLSFHRVIPGFVAQGGCPIGNGTGGPGYT 69
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT 154
+ A T KH +G+LSM ++ N+ S F I PHLDG + VFG+VT
Sbjct: 70 IDCETATNT-------TKHAKGVLSM-AHAGRNTGGSQFFICYAPQPHLDGVHTVFGQVT 121
Query: 155 KGDE 158
KG E
Sbjct: 122 KGME 125
>gi|126644136|ref|XP_001388204.1| cyclophilin-like protein [Cryptosporidium parvum Iowa II]
gi|5499743|gb|AAD43979.1|AF154878_1 cyclophilin-like protein [Cryptosporidium parvum]
gi|126117277|gb|EAZ51377.1| cyclophilin-like protein, putative [Cryptosporidium parvum Iowa II]
Length = 169
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGG 87
S R++ TNYGD++F + S P+ + L G Y F + KGF+ Q D G
Sbjct: 2 SVRII--TNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGT 59
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVR-GILSM---GRYSDPNSAASSFSILLGDAPHL 143
+ R ++ + ++K+ R GILSM G PN+ S F I P L
Sbjct: 60 GKGGESIYGRYFDDEI----YPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQL 115
Query: 144 DGQYAVFGKVTKGDETLRKLEGLPTRK--EGIFVMPTERITIHSSYYYDTEM 193
+G+Y +FGK+ G ETL LE P+ K + I + + I IHS+ D E+
Sbjct: 116 NGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIHSNPIADQEI 167
>gi|402487723|ref|ZP_10834541.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhizobium sp.
CCGE 510]
gi|401813592|gb|EJT05936.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Rhizobium sp.
CCGE 510]
Length = 190
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P VAP+ V I L + G Y+
Sbjct: 12 LYLASFAGDAFAQSADHY----LTIQLKDGPVVIQLMPEVAPKHVAQIEALAKKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIDGFMAQTGDVKFGNMEKGFDASLAGTGSSDMPDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172
DPNSA S F I+ + L+GQY V GKV G E + K++ R EG
Sbjct: 128 DPNSANSQFFIMFAEGSFLNGQYTVVGKVVSGMENVDKIK----RGEG 171
>gi|303232867|ref|ZP_07319551.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Atopobium
vaginae PB189-T1-4]
gi|302481057|gb|EFL44133.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Atopobium
vaginae PB189-T1-4]
Length = 257
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 36 NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95
N G + ++AP TV + L Y+ F R+ K F+AQ D G +
Sbjct: 105 NLGSVRIQLNATIAPITVSNFADLAESKFYDGLTFHRIIKDFMAQGGDPKGDGTG--GAP 162
Query: 96 QRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+++ E + E + + H RG +SM R DP+SA+S F I D P LDG+YA FG+V
Sbjct: 163 RKIHGEFSNNNEVNPILHKRGTISMARGQDPDSASSQFFICFKDVPSLDGKYAAFGQVVD 222
Query: 156 GDETLRKL 163
G + + KL
Sbjct: 223 GMDVIDKL 230
>gi|169797777|ref|YP_001715570.1| peptidyl-prolyl cis-trans isomerase (PPIase) (rotamase)
[Acinetobacter baumannii AYE]
gi|213155425|ref|YP_002317470.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
AB0057]
gi|215485127|ref|YP_002327368.1| peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter
baumannii AB307-0294]
gi|332855827|ref|ZP_08436061.1| peptidyl-prolyl cis-trans isomerase Cyp18 [Acinetobacter baumannii
6013150]
gi|332866593|ref|ZP_08437091.1| peptidyl-prolyl cis-trans isomerase Cyp18 [Acinetobacter baumannii
6013113]
gi|417559775|ref|ZP_12210654.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC137]
gi|417574874|ref|ZP_12225727.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Canada BC-5]
gi|421453778|ref|ZP_15903130.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
IS-123]
gi|421620471|ref|ZP_16061406.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC074]
gi|421634907|ref|ZP_16075513.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-13]
gi|421647917|ref|ZP_16088328.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
IS-251]
gi|421660753|ref|ZP_16100940.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-83]
gi|421800869|ref|ZP_16236837.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Canada BC1]
gi|421803079|ref|ZP_16239017.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
WC-A-694]
gi|169150704|emb|CAM88614.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)
[Acinetobacter baumannii AYE]
gi|213054585|gb|ACJ39487.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
AB0057]
gi|213986784|gb|ACJ57083.1| Peptidyl-prolyl cis-trans isomerase precursor [Acinetobacter
baumannii AB307-0294]
gi|332727265|gb|EGJ58710.1| peptidyl-prolyl cis-trans isomerase Cyp18 [Acinetobacter baumannii
6013150]
gi|332734523|gb|EGJ65635.1| peptidyl-prolyl cis-trans isomerase Cyp18 [Acinetobacter baumannii
6013113]
gi|395522357|gb|EJG10446.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC137]
gi|400205607|gb|EJO36587.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Canada BC-5]
gi|400213646|gb|EJO44600.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
IS-123]
gi|408516111|gb|EKK17690.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
IS-251]
gi|408700381|gb|EKL45836.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC074]
gi|408703248|gb|EKL48648.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-13]
gi|408703843|gb|EKL49224.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-83]
gi|410406445|gb|EKP58453.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Canada BC1]
gi|410413519|gb|EKP65335.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
WC-A-694]
Length = 185
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKSTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 137 GYAVFGKVVKGMDVVDRIVQAPTSNYGM 164
>gi|190348446|gb|EDK40899.2| hypothetical protein PGUG_04997 [Meyerozyma guilliermondii ATCC
6260]
Length = 578
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
++ Q+ P+ + V T GDI+ + AP+TV++ L + YN F RV KGF
Sbjct: 413 STEQKSPKKPNPSVTLHTTKGDIKLVLFQDKAPRTVENFLSLCKTRYYNQIIFHRVIKGF 472
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFS-----DVKHVRGILSMGRYSDPNSAASS 132
+ Q D G + + + G+F+ D+ H + + + PN+ S
Sbjct: 473 MIQTGDPKGDGTG---------GDSSFRGDFNDEFHPDLSHSQPYMVSMANAGPNTNRSQ 523
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYD 190
F I APHLD ++ VFG+V +G E ++ +E T K P +I I S+ Y+
Sbjct: 524 FFITTVSAPHLDNKHTVFGRVVEGKEVVQAIENAKTDKAD---KPKTQIAIVSTSIYE 578
>gi|402824860|ref|ZP_10874195.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sphingomonas
sp. LH128]
gi|402261617|gb|EJU11645.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Sphingomonas
sp. LH128]
Length = 156
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 74/142 (52%), Gaps = 8/142 (5%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
GD++ P +AP V+ I +L G Y+ F RV GF+AQ GG P
Sbjct: 18 GDVKIKLRPDLAPGHVERIKELAGEGFYDGVKFHRVIPGFMAQ-----GG--CPNGTGMG 70
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
++ + EF+ HVRG+ SM R S P+SA S F I+ +A LD QY V+G+V +G
Sbjct: 71 GSSKPDLKAEFNAEPHVRGVCSMARTSAPHSANSQFFIVFDNATFLDKQYTVWGQVVEGM 130
Query: 158 ETLRKL-EGLPTRKEGIFVMPT 178
E + L +G P R+ G V T
Sbjct: 131 EHVDALPKGEPPREPGKIVKAT 152
>gi|193078386|gb|ABO13358.2| peptidyl prolyl-cis-trans-isomerase rotamase [Acinetobacter
baumannii ATCC 17978]
Length = 169
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 7 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 63 NMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 120
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 121 GYAVFGKVVKGMDVVDRIVQAPTSNYGM 148
>gi|156378077|ref|XP_001630971.1| predicted protein [Nematostella vectensis]
gi|156218002|gb|EDO38908.1| predicted protein [Nematostella vectensis]
Length = 164
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V QT+ GD++ + P+T ++ L Y+ F R KGF+ Q D G G+
Sbjct: 3 VTLQTDIGDLKIELFCEDTPRTCENFLALCASHYYDNCVFHRNIKGFMVQTGDPTGSGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E + ++H RG +SM + PNS S F I G PHLD +Y
Sbjct: 63 GKSIWGKKFEDELS-----PSLRHNARGTVSMAN-NGPNSNGSQFFICYGKQPHLDMKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSS 186
+FGKV G ETL LE LP ++ + RI TIH++
Sbjct: 117 MFGKVIGGLETLDDLEKLPVNEKNYRPLTEVRIKSVTIHAN 157
>gi|424058116|ref|ZP_17795615.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
Ab33333]
gi|404670700|gb|EKB38584.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
Ab33333]
Length = 185
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKSTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITI 183
YAVFGKV KG + + ++ PT G+ +P + I I
Sbjct: 137 GYAVFGKVVKGMDVVDRIVQAPTSNYGMHQNVPKQPIKI 175
>gi|320538831|ref|ZP_08038507.1| putative peptidyl-prolyl cis-trans isomerase B (rotamase B)
[Serratia symbiotica str. Tucson]
gi|320030991|gb|EFW12994.1| putative peptidyl-prolyl cis-trans isomerase B (rotamase B)
[Serratia symbiotica str. Tucson]
Length = 164
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V F TNYGDI + AP TV++ R G Y+ F RV GF+ Q GG
Sbjct: 2 VTFHTNYGDIVIKTFADKAPVTVENFLNYCRAGFYDNTIFHRVINGFMIQ----GGGFEP 57
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL------- 143
MN+ A K + +K+ G L+M R +DP+SA + F I + D L
Sbjct: 58 GMNQKSTQAAIKNEAN--NGLKNTIGTLAMARTNDPHSATAQFFINVADNDFLNFRSENT 115
Query: 144 -DGQYAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHS 185
D Y VFG+V G + + K++G+ T G+ +P E + I S
Sbjct: 116 QDWGYCVFGEVVAGMDVVDKIKGVKTGHSGMHQDVPVEDVVIKS 159
>gi|94310028|ref|YP_583238.1| peptidyl-prolyl cis-trans isomerase A [Cupriavidus metallidurans
CH34]
gi|93353880|gb|ABF07969.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Cupriavidus
metallidurans CH34]
Length = 202
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
RV F T+ G YP AP+TV + V+ G Y+ F RV GF+ Q GG
Sbjct: 40 RVQFVTSAGKFTIELYPDAAPKTVANFMGYVKSGFYSGTIFHRVINGFMVQ----GGGFD 95
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD----- 144
M E + + + +K+ G ++M R S+PNSA + F + + D P+LD
Sbjct: 96 RDMKE--KPTLAPIALESQNGLKNKAGTVAMARTSNPNSATAQFFVNVVDNPNLDYPQPD 153
Query: 145 -GQYAVFGKVTKGDETLRKLEGLPTRKEGIF-VMPTERITIHSS 186
YAVFGKV +G +T+ K++ PT G +P I I S+
Sbjct: 154 GNGYAVFGKVVEGMDTIDKIKTTPTTAYGAMRNVPAAPIVIESA 197
>gi|445457082|ref|ZP_21446300.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC047]
gi|444777203|gb|ELX01237.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC047]
Length = 185
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 137 GYAVFGKVVKGMDVVDRIVQAPTSNYGM 164
>gi|394989196|ref|ZP_10382030.1| hypothetical protein SCD_01615 [Sulfuricella denitrificans skB26]
gi|393791615|dbj|GAB71669.1| hypothetical protein SCD_01615 [Sulfuricella denitrificans skB26]
Length = 216
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 91/190 (47%), Gaps = 24/190 (12%)
Query: 6 RIFLTLITL-IGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
R+ + +I+L I T++ +P V +TN G+I YP AP+TV + V G
Sbjct: 4 RLTMIIISLLISTSALAANP-----LVKMRTNQGEIVLELYPDKAPKTVANFLHYVSSGH 58
Query: 65 YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRY 123
YN F R + F+ Q GG P + Q V E ++ +++ RG LSM R
Sbjct: 59 YNGTVFHRTIQQFIIQ-----GGGFTP--DFQYKPTFDPVPNEATNGLRNERGTLSMARA 111
Query: 124 SDPNSAASSFSILLGDA-------PHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV 175
DP+SA + F I L D PH D Y VFGKV KG + +K+ LPT G F
Sbjct: 112 YDPDSATAQFFINLDDNKFLNHHRPHPDYYGYCVFGKVIKGMDIAKKIGALPTASGGPFT 171
Query: 176 --MPTERITI 183
+P E + I
Sbjct: 172 ADVPIEPVVI 181
>gi|421080286|ref|ZP_15541220.1| Rotamase B [Pectobacterium wasabiae CFBP 3304]
gi|401705139|gb|EJS95328.1| Rotamase B [Pectobacterium wasabiae CFBP 3304]
Length = 164
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ TN+GDI + AP TV++ R G Y+ F RV GF+ Q GG A
Sbjct: 2 ITLHTNHGDIVINTFADKAPVTVENFLNYCRSGFYDNTIFHRVINGFMIQ-----GGGFA 56
Query: 91 PMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHL------ 143
P + + E T+ E ++ +K+ RG L+M R +DP+SA + F I L D L
Sbjct: 57 P--GMDQKETNATIKNEANNGLKNTRGTLAMARTNDPHSATAQFFINLVDNDFLNFRSER 114
Query: 144 -DGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITI 183
DG Y VF +VT G + + K++G+ T + G+ +P E + I
Sbjct: 115 ADGWGYCVFAEVTDGMDVVDKIKGVATGRSGMHQDVPKEDVVI 157
>gi|421672847|ref|ZP_16112799.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC065]
gi|421690883|ref|ZP_16130548.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
IS-116]
gi|404563536|gb|EKA68742.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
IS-116]
gi|410388461|gb|EKP40899.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC065]
Length = 185
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 137 GYAVFGKVVKGMDVVDRIVQTPTSNYGM 164
>gi|350405564|ref|XP_003487479.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like [Bombus
impatiens]
Length = 161
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + + P++ ++ L Y+ F R KGF+ Q D G+
Sbjct: 3 VTLHTDVGDIKIELFCELCPKSCENFLALCASDYYDNCLFHRNIKGFIVQTGDPTHIGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
++ E E ++KH RG++SM + PN+ S F I G PHLD +Y
Sbjct: 63 GTSIWNRKFEDEFK-----EELKHNARGLVSMAN-NGPNTNGSQFFITYGPQPHLDLKYT 116
Query: 149 VFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSS 186
+FGKV G ETL +LE LP + + RI TIH++
Sbjct: 117 LFGKVIDGLETLEQLEKLPVNPKNYRPLTETRINSVTIHAN 157
>gi|378765357|ref|YP_005193816.1| peptidyl-prolyl cis-trans isomerase A [Pantoea ananatis LMG 5342]
gi|386077609|ref|YP_005991134.1| peptidyl-prolyl cis-trans isomerase A precursor PpiA [Pantoea
ananatis PA13]
gi|354986790|gb|AER30914.1| peptidyl-prolyl cis-trans isomerase A precursor PpiA [Pantoea
ananatis PA13]
gi|365184829|emb|CCF07779.1| peptidyl-prolyl cis-trans isomerase A [Pantoea ananatis LMG 5342]
Length = 190
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
G V+ T+ G+IE AP +V + V G YN F RV GF+ Q G
Sbjct: 27 GDTHVLLTTSAGNIELELNNQKAPVSVKNFVDYVNSGFYNNTIFHRVIPGFMIQ----GG 82
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD- 144
G ++ E+Q+ + + E + ++++RG +SM R +D +SA S F + + D LD
Sbjct: 83 GFTS---EMQQKQTNAPIKNEADNGLRNLRGTISMARTADKDSATSQFFLNVADNAFLDH 139
Query: 145 GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGK+ KG + + K+ +PT+ G + +PT+ + I S+
Sbjct: 140 GQRDFGYAVFGKIVKGQDVVDKISQVPTKDVGPYQNVPTKPVVILSA 186
>gi|332873272|ref|ZP_08441227.1| peptidyl-prolyl cis-trans isomerase Cyp18 [Acinetobacter baumannii
6014059]
gi|384130007|ref|YP_005512619.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
1656-2]
gi|384141285|ref|YP_005523995.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
MDR-ZJ06]
gi|387125759|ref|YP_006291641.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
MDR-TJ]
gi|416150238|ref|ZP_11603285.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB210]
gi|417544367|ref|ZP_12195453.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC032]
gi|417571503|ref|ZP_12222360.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC189]
gi|417577412|ref|ZP_12228257.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-17]
gi|417868773|ref|ZP_12513777.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ABNIH1]
gi|417876321|ref|ZP_12521100.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ABNIH3]
gi|417884184|ref|ZP_12528390.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ABNIH4]
gi|421203359|ref|ZP_15660500.1| peptidyl-prolyl cis-trans isomerase Cyp18 [Acinetobacter baumannii
AC12]
gi|421535152|ref|ZP_15981415.1| peptidyl-prolyl cis-trans isomerase Cyp18 [Acinetobacter baumannii
AC30]
gi|421628533|ref|ZP_16069301.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC180]
gi|421655635|ref|ZP_16095952.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-72]
gi|421661676|ref|ZP_16101847.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC110]
gi|421665962|ref|ZP_16106059.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC087]
gi|421669499|ref|ZP_16109521.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC099]
gi|421688752|ref|ZP_16128448.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
IS-143]
gi|421697107|ref|ZP_16136682.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
WC-692]
gi|421701638|ref|ZP_16141129.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ZWS1122]
gi|421705448|ref|ZP_16144878.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ZWS1219]
gi|421788074|ref|ZP_16224391.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-82]
gi|421790807|ref|ZP_16226999.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-2]
gi|424050420|ref|ZP_17787956.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
Ab11111]
gi|424064980|ref|ZP_17802464.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
Ab44444]
gi|425752975|ref|ZP_18870869.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-113]
gi|445447888|ref|ZP_21443822.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
WC-A-92]
gi|445476993|ref|ZP_21454031.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-78]
gi|445486729|ref|ZP_21457482.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
AA-014]
gi|322506227|gb|ADX01681.1| Peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
1656-2]
gi|332738478|gb|EGJ69350.1| peptidyl-prolyl cis-trans isomerase Cyp18 [Acinetobacter baumannii
6014059]
gi|333364087|gb|EGK46101.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB210]
gi|342232096|gb|EGT96881.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ABNIH1]
gi|342234590|gb|EGT99232.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ABNIH4]
gi|342238131|gb|EGU02570.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ABNIH3]
gi|347591778|gb|AEP04499.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
[Acinetobacter baumannii MDR-ZJ06]
gi|385880251|gb|AFI97346.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Acinetobacter baumannii MDR-TJ]
gi|395551951|gb|EJG17960.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC189]
gi|395570633|gb|EJG31295.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-17]
gi|398327197|gb|EJN43334.1| peptidyl-prolyl cis-trans isomerase Cyp18 [Acinetobacter baumannii
AC12]
gi|400382255|gb|EJP40933.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC032]
gi|404559615|gb|EKA64868.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
WC-692]
gi|404560047|gb|EKA65296.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
IS-143]
gi|404672108|gb|EKB39946.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
Ab11111]
gi|404673063|gb|EKB40867.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
Ab44444]
gi|407195806|gb|EKE66929.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ZWS1219]
gi|407196012|gb|EKE67130.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ZWS1122]
gi|408507278|gb|EKK08974.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-72]
gi|408705905|gb|EKL51232.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC180]
gi|408715549|gb|EKL60676.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC110]
gi|409986878|gb|EKO43068.1| peptidyl-prolyl cis-trans isomerase Cyp18 [Acinetobacter baumannii
AC30]
gi|410388643|gb|EKP41076.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC099]
gi|410388847|gb|EKP41274.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC087]
gi|410404593|gb|EKP56657.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-82]
gi|410404628|gb|EKP56691.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-2]
gi|425498448|gb|EKU64527.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-113]
gi|444758511|gb|ELW83007.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
WC-A-92]
gi|444769351|gb|ELW93541.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
AA-014]
gi|444777165|gb|ELX01200.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-78]
Length = 185
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITI 183
YAVFGKV KG + + ++ PT G+ +P + I I
Sbjct: 137 GYAVFGKVVKGMDVVDRIVQAPTSNYGMHQNVPKQPIKI 175
>gi|301346194|ref|ZP_07226935.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB056]
Length = 156
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 7 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 63 NMQEKSTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 120
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 121 GYAVFGKVVKGMDVVDRIVQAPTSNYGM 148
>gi|167837115|ref|ZP_02463998.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
thailandensis MSMB43]
Length = 191
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 30 VQMKTTQGDIRIELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 83
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K+ G ++M R SDPNSA + F I D P+ DG
Sbjct: 84 KTNFDEKPTRAPIPLESKNGLKNATGTIAMARTSDPNSATAQFFINTVDNASLDYPNPDG 143
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
YAVFGKV G + ++K+E T G + +P + I I S+
Sbjct: 144 NGYAVFGKVVSGMDVVKKIEATTTTVRGPMRDVPEKPIVIESA 186
>gi|75675989|ref|YP_318410.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Nitrobacter
winogradskyi Nb-255]
gi|74420859|gb|ABA05058.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Nitrobacter
winogradskyi Nb-255]
Length = 154
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ G +
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGCPQG--TG 65
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
Q+++AE F+ HVRG SM R P+S S F I +A LDGQY V+
Sbjct: 66 MGGSGQKLKAE------FNREPHVRGTASMARAQSPDSGDSQFFICFDNASFLDGQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKV +G E + K++
Sbjct: 120 GKVIEGMENVDKIK 133
>gi|258543482|ref|YP_003188915.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-01]
gi|384043402|ref|YP_005482146.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-12]
gi|384051919|ref|YP_005478982.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-03]
gi|384055026|ref|YP_005488120.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-07]
gi|384058261|ref|YP_005490928.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-22]
gi|384060902|ref|YP_005500030.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-26]
gi|384064194|ref|YP_005484836.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-32]
gi|384120205|ref|YP_005502829.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256634560|dbj|BAI00536.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-01]
gi|256637618|dbj|BAI03587.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-03]
gi|256640670|dbj|BAI06632.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-07]
gi|256643727|dbj|BAI09682.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-22]
gi|256646782|dbj|BAI12730.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-26]
gi|256649835|dbj|BAI15776.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-32]
gi|256652823|dbj|BAI18757.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655879|dbj|BAI21806.1| peptidyl-prolyl cis-trans isomerase [Acetobacter pasteurianus IFO
3283-12]
Length = 163
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 37 YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQ 96
+G + P +AP+ + I L G Y+ F RV GF+AQ D G +++
Sbjct: 16 HGRVIIKLRPDLAPKAAERIRTLAAEGFYDNVPFHRVIPGFMAQGGDPTG-TGMHGSKLP 74
Query: 97 RVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ AE T +F RG + M R SDPNSA S F I+ +PHLDGQY + G+V +G
Sbjct: 75 DLPAEFTNKAKFE-----RGTIGMARTSDPNSANSQFFIMFEPSPHLDGQYTIVGEVIEG 129
Query: 157 DETLRKLE 164
E + K++
Sbjct: 130 MENVDKIK 137
>gi|241764155|ref|ZP_04762190.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Acidovorax
delafieldii 2AN]
gi|241366492|gb|EER60992.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Acidovorax
delafieldii 2AN]
Length = 194
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 18/176 (10%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A +Q+ P +V T+ GDI P+ AP+TV++ V+ Y+ F RV GF
Sbjct: 26 AQAQDAP-----KVKLATSMGDIVVQLDPAKAPKTVENFLAYVKDKHYDGTVFHRVIDGF 80
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILL 137
+ Q GG +A M VQ+ + + +K+ ++M R +PNSA + F I +
Sbjct: 81 MIQG----GGFTADM--VQKPTKAPIPLEAANGLKNDTYTIAMARTGNPNSATAQFFINV 134
Query: 138 GD-----APHLDGQ-YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
D AP DG YAVFGKV G E + K++ +PT +G +PT +TI+S+
Sbjct: 135 KDNAMLNAPQPDGHGYAVFGKVVSGTEVVDKIKAVPTSNKGPHQNVPTTPVTINSA 190
>gi|118576621|ref|YP_876364.1| peptidyl-prolyl cis-trans isomerase (rotamase) [Cenarchaeum
symbiosum A]
gi|118195142|gb|ABK78060.1| peptidyl-prolyl cis-trans isomerase (rotamase) [Cenarchaeum
symbiosum A]
Length = 159
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +TN+G I F AP+TV + KLV G Y+ F RV F+ Q D +
Sbjct: 4 VKIETNHGKIVFALDREAAPETVRNFEKLVGSGFYDGTLFHRVIPDFMIQGGDP-NTKGT 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
+ ++ EF+ H RG +SM R +DP+SA S F I++ D+P LD QY F
Sbjct: 63 DKHSWGTGGPGYSIKAEFNSRPHKRGAVSMARSTDPDSAGSQFFIVVKDSPFLDRQYTAF 122
Query: 151 GKVTKG 156
G+V++G
Sbjct: 123 GEVSEG 128
>gi|392378887|ref|YP_004986047.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Azospirillum
brasilense Sp245]
gi|356880369|emb|CCD01318.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Azospirillum
brasilense Sp245]
Length = 183
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 7 IFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFG-----FYPSVAPQTVDHIFKLVR 61
+F T I G A + DP+ T Y D++ G P +AP V I +L R
Sbjct: 12 LFATFIFAQGEAKAL-DPE--------NTLYLDLKDGRVVIELRPDLAPNHVARIKELTR 62
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMG 121
G YN F RV GF+AQ + + K + EFS HVRG LSM
Sbjct: 63 QGFYNGVVFHRVIDGFMAQ--------TGDPTGTGTGGSGKKLKAEFSSEPHVRGTLSMA 114
Query: 122 RYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
R DP+SA S F I + LD QY V+GKV +G E + K++
Sbjct: 115 RTPDPDSADSQFFICFAPSSFLDKQYTVWGKVVEGMEFVDKIK 157
>gi|327263058|ref|XP_003216338.1| PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing
protein 1-like [Anolis carolinensis]
Length = 643
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A+ E P+ S + T+ GDI +P P+TV++ R G YN++ F R+ KGF
Sbjct: 478 ATQAEGPKRVSDSAIIHTSMGDIHVKLFPVECPKTVENFCVHSRNGYYNSHTFHRIIKGF 537
Query: 78 VAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-----VKHVRG-ILSMGRYSDPNSAAS 131
+ Q D G + E GEF D ++H R LSM + PN+ S
Sbjct: 538 MIQTGDPTG---------TGMGGESIWGGEFEDEFHSTLRHDRPYTLSMAN-AGPNTNGS 587
Query: 132 SFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGL 166
F I + P LD +++VFG+VTKG E ++++ +
Sbjct: 588 QFFITVVPTPWLDNKHSVFGRVTKGMEVVQRISNV 622
>gi|301511659|ref|ZP_07236896.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii AB058]
Length = 156
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 7 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 63 NMQEKSTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 120
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 121 GYAVFGKVVKGMDVVDRIVQAPTSNYGM 148
>gi|425748640|ref|ZP_18866625.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acinetobacter baumannii WC-348]
gi|425490880|gb|EKU57172.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acinetobacter baumannii WC-348]
Length = 185
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 137 GYAVFGKVVKGMDVVDRIVQAPTSNYGM 164
>gi|403676568|ref|ZP_10938513.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter sp. NCTC 10304]
gi|417874820|ref|ZP_12519660.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ABNIH2]
gi|421653081|ref|ZP_16093427.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC0162]
gi|342227652|gb|EGT92566.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
ABNIH2]
gi|408503635|gb|EKK05391.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC0162]
Length = 185
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITI 183
YAVFGKV KG + + ++ PT G+ +P + I I
Sbjct: 137 GYAVFGKVVKGIDVVDRIVQAPTSNYGMHQNVPKQPIKI 175
>gi|424903634|ref|ZP_18327147.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
thailandensis MSMB43]
gi|390931507|gb|EIP88908.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Burkholderia
thailandensis MSMB43]
Length = 187
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V +T GDI YP AP+TV + V+ G YN F RV KGF+ Q G
Sbjct: 26 VQMKTTQGDIRIELYPEKAPKTVANFLDYVKAGQYNGTIFHRVIKGFMIQ------GGGY 79
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA-----PHLDG 145
N ++ + + +K+ G ++M R SDPNSA + F I D P+ DG
Sbjct: 80 KTNFDEKPTRAPIPLESKNGLKNATGTIAMARTSDPNSATAQFFINTVDNASLDYPNPDG 139
Query: 146 Q-YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTERITIHSS 186
YAVFGKV G + ++K+E T G + +P + I I S+
Sbjct: 140 NGYAVFGKVVSGMDVVKKIEATTTTVRGPMRDVPEKPIVIESA 182
>gi|303326263|ref|ZP_07356706.1| peptidyl-prolyl cis-trans isomerase B [Desulfovibrio sp. 3_1_syn3]
gi|345891937|ref|ZP_08842763.1| peptidyl-prolyl cis-trans isomerase B [Desulfovibrio sp.
6_1_46AFAA]
gi|302864179|gb|EFL87110.1| peptidyl-prolyl cis-trans isomerase B [Desulfovibrio sp. 3_1_syn3]
gi|345047716|gb|EGW51577.1| peptidyl-prolyl cis-trans isomerase B [Desulfovibrio sp.
6_1_46AFAA]
Length = 169
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V+ +T+ GDI +P APQTV + + V G Y F RV GF+ Q GG A
Sbjct: 7 VLLETSSGDILIELFPDKAPQTVANFLQYVDDGFYENTIFHRVIPGFMIQ----GGGMGA 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGD-------APHL 143
M+E E + + +K+ RG L+M R DP+SA + F I L D P L
Sbjct: 63 RMDEKDTREPVQNEAD--NGLKNERGTLAMARTRDPHSATAQFFINLVDNDFLDHSQPTL 120
Query: 144 DGQ-YAVFGKVTKGDETLRKLEGLPTRKEGI 173
DG Y VFGKVT+G + + K+ + T+ G+
Sbjct: 121 DGWGYCVFGKVTEGMDVVDKIAKVKTKSMGM 151
>gi|374287046|ref|YP_005034131.1| putative peptidyl-prolyl cis-trans isomerase [Bacteriovorax marinus
SJ]
gi|301165587|emb|CBW25158.1| putative peptidyl-prolyl cis-trans isomerase [Bacteriovorax marinus
SJ]
Length = 191
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA 82
D L + V+ +T G+I YP AP TV +LV+ G Y+ F RV F+ Q
Sbjct: 45 DSGLSAESVILKTAKGNIVIKLYPKDAPNTVTRFLQLVQEGFYDGLKFHRVHPKFLIQAG 104
Query: 83 DVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRY-SDPNSAASSFSILLGDA 140
D G G +++ EF+ ++H++G ++M R D +SA S F I L
Sbjct: 105 DPTGTGNGGSGVKLK---------AEFNKLQHIKGTVAMARKPEDIDSADSQFYIALTTL 155
Query: 141 PHLDGQYAVFGKVTKGDETLRKLE 164
HLD Y VFG+V G + L K+
Sbjct: 156 THLDSNYTVFGQVVDGLDVLDKIN 179
>gi|194289321|ref|YP_002005228.1| peptidyl-prolyl cis-trans isomerase a (rotamase a) [Cupriavidus
taiwanensis LMG 19424]
gi|193223156|emb|CAQ69161.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Cupriavidus
taiwanensis LMG 19424]
Length = 194
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 1 MLNVIRIFLTLI---TLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIF 57
M+ RI L + TL ++ S Q + RV F T+ G YP AP+TV +
Sbjct: 1 MIRSRRILLAGLAAGTLALSSFSALAQQKAAERVQFVTSAGKFTVELYPEAAPKTVANFL 60
Query: 58 KLVRLGCYNTNHFFRVDKGFVAQVADVVGG------RSAPMNEVQRVEAEKTVVGEFSDV 111
+ V+ G Y+ F RV GF+ Q GG + P +EA + +
Sbjct: 61 EYVKSGFYSGTIFHRVINGFMVQ-----GGGFDRDMKEKPTRAPIPLEAR-------NGL 108
Query: 112 KHVRGILSMGRYSDPNSAASSFSILLGDAPHLD------GQYAVFGKVTKGDETLRKLEG 165
K+ G ++M R S+P+SA + F + + D P+LD YAVFGKV +G +T+ K++
Sbjct: 109 KNKAGTVAMARTSNPDSATAQFFVNVVDNPNLDYPQPDGNGYAVFGKVVEGMDTIDKIKS 168
Query: 166 LPTRKEG-IFVMPTERITIHSS 186
+PT G + +P I I S+
Sbjct: 169 VPTTAYGPMRNVPAAPIVIESA 190
>gi|417548103|ref|ZP_12199184.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-18]
gi|400388402|gb|EJP51474.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-18]
Length = 185
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 137 GYAVFGKVVKGMDVVDRIVQAPTSNYGM 164
>gi|294677247|ref|YP_003577862.1| peptidyl-prolyl cis-trans isomerase B [Rhodobacter capsulatus SB
1003]
gi|294476067|gb|ADE85455.1| peptidyl-prolyl cis-trans isomerase B [Rhodobacter capsulatus SB
1003]
Length = 193
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G + P VAP V+ I +L Y+ F RV +GF+AQ DV G+ +
Sbjct: 43 GKVVIDLLPDVAPGHVERITQLANEHAYDDVVFHRVIEGFMAQTGDVQFGKRGGDLSMAG 102
Query: 98 VEAEK--TVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK 155
+ K + EFS+ RG++ M R + P+SA S F I+ APHLDGQY + G V +
Sbjct: 103 MGGSKYGDLPAEFSNRSFARGMVGMARSASPDSANSQFFIMFEPAPHLDGQYTIVGHVVE 162
Query: 156 GDETLRKLE 164
G + + KL+
Sbjct: 163 GMDLVDKLK 171
>gi|261855127|ref|YP_003262410.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Halothiobacillus neapolitanus c2]
gi|261835596|gb|ACX95363.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Halothiobacillus neapolitanus c2]
Length = 199
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 23/196 (11%)
Query: 6 RIF--LTLITLIGTASS---QEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV 60
R+F + + LIG+ SS E P+ V TN G I AP+TV++ V
Sbjct: 6 RLFSAIAVACLIGSTSSVFATEAPKAKPVLVKIVTNMGAITVEMDADKAPKTVENFLSYV 65
Query: 61 RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILS 119
+ G YN F RV GF+ Q GG P + ++ + + E ++ + + RG ++
Sbjct: 66 KSGFYNDTIFHRVIPGFMIQ-----GGGFTP--DFRQKPTQAPIANEANNGLSNRRGTIA 118
Query: 120 MGRYSDPNSAASSFSILLGDAPHLD--------GQYAVFGKVTKGDETLRKLEGLPTRKE 171
M R SDPNSA + F I + D LD YAVFG VT G + + K+ PT
Sbjct: 119 MARTSDPNSATAQFFINVADNKFLDYSGPSMRGAGYAVFGHVTSGMDVVDKIVSTPTGAA 178
Query: 172 GIFV--MPTERITIHS 185
G F +P + + I S
Sbjct: 179 GPFPQDVPKKTVLIES 194
>gi|316934201|ref|YP_004109183.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Rhodopseudomonas palustris DX-1]
gi|315601915|gb|ADU44450.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Rhodopseudomonas palustris DX-1]
Length = 155
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G ++ P +AP V I +LVR G Y+ F RV +GF+AQ
Sbjct: 8 LILETTQGTVKIEMRPDLAPNHVARIKELVREGFYDGIVFHRVIEGFMAQTG-------C 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P K + EF+ HVRG SM R ++P+S S F I DA LD QY V+
Sbjct: 61 PQGTGMGGSGTK-LKAEFNAEPHVRGTASMARAANPDSGDSQFFICFDDARFLDKQYTVW 119
Query: 151 GKVTKGDETLRKLE-GLPTR 169
GKV +G E + K++ G P +
Sbjct: 120 GKVIEGMENVDKIKRGEPVK 139
>gi|281210227|gb|EFA84395.1| cyclophilin-type peptidylprolyl cis-trans isomerase
[Polysphondylium pallidum PN500]
Length = 538
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN GDI + P+T ++ L G YN F R K F+ Q D G +
Sbjct: 271 VSIQTNIGDINIQLHCDFVPKTCENFLALCATGYYNNVIFHRSIKNFMIQGGDPTGTGTG 330
Query: 91 PMNEVQRVEAEKTVVGEFSDV--KHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYA 148
+ +R A+ EF H RGILSM S PN+ S F IL APHLD ++
Sbjct: 331 GQSIWKRAFAD-----EFKPYLSHHERGILSMAN-SGPNTNGSQFFILFRPAPHLDRKHT 384
Query: 149 VFGKVTKGDETLRKLEGLPTRKEGIFVMP 177
VFGKV G + L+ +E + T + + ++P
Sbjct: 385 VFGKVVGGLDVLKTMEMIKTNQNDVPLIP 413
>gi|258569246|ref|XP_002585367.1| peptidyl-prolyl cis-trans isomerase D [Uncinocarpus reesii 1704]
gi|237906813|gb|EEP81214.1| peptidyl-prolyl cis-trans isomerase D [Uncinocarpus reesii 1704]
Length = 624
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGF 77
A + + + G++ ++ T GDI +PSVAP+ V++ R G YN F RV + F
Sbjct: 463 AWANKQAETGTSAII-HTTMGDIHLRLFPSVAPKAVENFVTHARNGYYNNTIFHRVIRKF 521
Query: 78 VAQ----VADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRG-ILSMGRYSDPNSAASS 132
+ Q + D GG S E + EFS +KH + LSM + PN+ S
Sbjct: 522 MIQGGDPLGDGTGGESIWGGEFE---------DEFSTLKHDKPYTLSMAN-AGPNTNGSQ 571
Query: 133 FSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
F I P LDG + +FG+ KG + + ++E + T KE
Sbjct: 572 FFITTEKTPWLDGHHTIFGRAVKGLDVVHRIENVKTYKE 610
>gi|405952701|gb|EKC20481.1| Peptidyl-prolyl cis-trans isomerase-like 3 [Crassostrea gigas]
Length = 160
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+YGDI+ + P++ ++ L YN F R KGF+ Q D G G+
Sbjct: 3 VTLHTDYGDIKLELFCEQCPKSCENFLALCASDYYNGCVFHRNIKGFMLQTGDPTGTGKG 62
Query: 90 APMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
N + + E E SD +KH VRG++SM + P+S S F I PHLD +Y
Sbjct: 63 G--NSIWGDKFED----ELSDTLKHNVRGVVSMAN-NGPDSNGSQFFITYAKQPHLDLKY 115
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEG---IFVMPTERITIHSS 186
+FGKV G ETL ++E P ++ + M +TIH++
Sbjct: 116 TIFGKVIDGFETLDEIEKQPVNEKNYRPLNDMHLLNVTIHAN 157
>gi|433536882|ref|ZP_20493387.1| peptidyl-prolyl cis-trans isomerase A [Neisseria meningitidis
77221]
gi|432273818|gb|ELL28915.1| peptidyl-prolyl cis-trans isomerase A [Neisseria meningitidis
77221]
Length = 185
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
F T++T + A S P + + V+ +T+ G+I S AP+TV + + R G Y+
Sbjct: 5 FKTVLTALLLAVSL--PSMAATHVLMETDMGNIRLVLDESKAPKTVANFVRYARKGFYDD 62
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDP 126
F RV GFV Q G + VQ+ +K V E + +K+ G ++M R +DP
Sbjct: 63 TVFHRVIDGFVIQ------GGGFTEDLVQKA-TDKAVANESGNGLKNTAGTIAMARTADP 115
Query: 127 NSAASSFSILLGDAPHLD---GQYA--VFGKVTKGDETLRKLEGLPTRKEGIF 174
+SA S F I L D LD GQY VFG+V G +T+ K+ + T G +
Sbjct: 116 DSATSQFFINLADNASLDYKNGQYGYTVFGRVESGMDTVSKIARVKTATRGFY 168
>gi|430808232|ref|ZP_19435347.1| peptidyl-prolyl cis-trans isomerase A, partial [Cupriavidus sp.
HMR-1]
gi|429499444|gb|EKZ97870.1| peptidyl-prolyl cis-trans isomerase A, partial [Cupriavidus sp.
HMR-1]
Length = 198
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRS 89
RV F T+ G YP AP+TV + V+ G Y+ F RV GF+ Q GG
Sbjct: 36 RVQFVTSAGKFTIELYPDAAPKTVANFMGYVKSGFYSGTIFHRVINGFMVQ----GGGFD 91
Query: 90 APMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD----- 144
M E + + + +K+ G ++M R S+PNSA + F + + D P+LD
Sbjct: 92 RDMKE--KPTLAPIALESQNGLKNKAGTVAMARTSNPNSATAQFFVNVVDNPNLDYPQPD 149
Query: 145 -GQYAVFGKVTKGDETLRKLEGLPTRKEGIF-VMPTERITIHSS 186
YAVFGKV +G +T+ K++ PT G +P I I S+
Sbjct: 150 GNGYAVFGKVVEGMDTIDKIKTTPTTAYGAMRNVPAAPIVIESA 193
>gi|70947889|ref|XP_743518.1| cyclophilin [Plasmodium chabaudi chabaudi]
gi|56523050|emb|CAH84658.1| cyclophilin, putative [Plasmodium chabaudi chabaudi]
Length = 167
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ TNYGDI+ + P+T + L G Y+ F R KGF Q D
Sbjct: 3 ISLHTNYGDIKIELFCHEVPKTCKNFLALCASGYYDNTKFHRNIKGFAIQGGD------- 55
Query: 91 PMNEVQRVEA--EKTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
P N + E+ K EF S +KH RGI+SM PN+ S F I PHL+G
Sbjct: 56 PTNTGKGGESIYGKYFDDEFDSTLKHDKRGIVSMANKGKPNTNGSQFFITYSRQPHLNGV 115
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEG--IFVMPTERITIHSS 186
Y VF KV G + L LE P ++ I + E +TIH++
Sbjct: 116 YPVFAKVIDGMDVLSTLENEPVEEKNRPIKDIIIESVTIHAN 157
>gi|253690223|ref|YP_003019413.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251756801|gb|ACT14877.1| peptidyl-prolyl cis-trans isomerase cyclophilin type
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 190
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG 86
S RV+ T+ G+IE AP +V + + V G YN F RV GF+ Q G
Sbjct: 27 ASTRVLLTTSAGNIELSLDNQKAPVSVKNFVEYVNNGFYNGTTFHRVIPGFMVQ----GG 82
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSD--VKHVRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
G S MN+ +A + +D +++ RG ++M R ++ +SA S F I + D LD
Sbjct: 83 GFSGEMNQ----KATNAPIKNEADNGLRNQRGTIAMARTAEKDSATSQFFINVADNAFLD 138
Query: 145 -GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 186
GQ YAVFGKV KG E + K+ + T+ G + +PT I I S+
Sbjct: 139 HGQRDFGYAVFGKVVKGMEVVDKISQVQTKNVGPYQNVPTTPIVIQSA 186
>gi|385324064|ref|YP_005878503.1| peptidyl-prolyl cis-trans isomerase A (PPIase A; rotamase A;
cyclophilin A) [Neisseria meningitidis 8013]
gi|385341815|ref|YP_005895686.1| peptidylprolyl isomerase A [Neisseria meningitidis M01-240149]
gi|385857338|ref|YP_005903850.1| peptidylprolyl isomerase A [Neisseria meningitidis NZ-05/33]
gi|421544559|ref|ZP_15990635.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis NM140]
gi|421546674|ref|ZP_15992719.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis NM183]
gi|421548926|ref|ZP_15994950.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis NM2781]
gi|421552877|ref|ZP_15998849.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis NM576]
gi|261392451|emb|CAX49998.1| peptidyl-prolyl cis-trans isomerase A (PPIase A; rotamase A;
cyclophilin A) [Neisseria meningitidis 8013]
gi|325202021|gb|ADY97475.1| peptidylprolyl isomerase A [Neisseria meningitidis M01-240149]
gi|325208227|gb|ADZ03679.1| peptidylprolyl isomerase A [Neisseria meningitidis NZ-05/33]
gi|402322919|gb|EJU58369.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis NM183]
gi|402323750|gb|EJU59192.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis NM140]
gi|402325605|gb|EJU61014.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis NM2781]
gi|402330056|gb|EJU65405.1| peptidyl-prolyl cis-trans isomerase [Neisseria meningitidis NM576]
Length = 185
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 8 FLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNT 67
F T++T + A S P + + V+ +T+ G+I S AP+TV + + R G Y+
Sbjct: 5 FKTVLTALLLAVSL--PSMAATHVLMETDMGNIRLVLDESKAPKTVANFVRYARKGFYDD 62
Query: 68 NHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDP 126
F RV GFV Q G + VQ+ +K V E + +K+ G ++M R +DP
Sbjct: 63 TVFHRVIDGFVIQ------GGGFTEDLVQKA-TDKAVANESGNGLKNTAGTIAMARTADP 115
Query: 127 NSAASSFSILLGDAPHLD---GQYA--VFGKVTKGDETLRKLEGLPTRKEGIF 174
+SA S F I L D LD GQY VFG+V G +T+ K+ + T G +
Sbjct: 116 DSATSQFFINLADNASLDYKNGQYGYTVFGRVESGMDTVSKIARVKTATRGFY 168
>gi|163793875|ref|ZP_02187849.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [alpha
proteobacterium BAL199]
gi|159180986|gb|EDP65503.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [alpha
proteobacterium BAL199]
Length = 177
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 4 VIRIFLTLITLIGTASSQEDPQ------LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIF 57
V I ++++ + ++ DP+ L S RVV P +AP+ V I
Sbjct: 7 VASIIGAIMSMDTSGAAAADPENTLYMDLASGRVVID---------LRPDLAPKHVARIK 57
Query: 58 KLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRG 116
+L R G YN F RV +GF+AQ D G GR Q+++AE FS+ + RG
Sbjct: 58 ELTREGFYNGVVFHRVIEGFMAQTGDPTGTGRGG---SGQKIDAE------FSNTNYGRG 108
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
+ M R PNS S F I D L+GQY V+ +V++G E + ++
Sbjct: 109 TVGMARSQSPNSGDSQFFICFKDCSFLNGQYTVWAQVSEGMELVDGIK 156
>gi|91977072|ref|YP_569731.1| cyclophilin type peptidyl-prolyl cis-trans isomerase
[Rhodopseudomonas palustris BisB5]
gi|91683528|gb|ABE39830.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Rhodopseudomonas palustris BisB5]
Length = 155
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G ++ P +AP V I +LVR G Y+ F RV +GF+AQ
Sbjct: 8 LILETTQGAVKIELRPDLAPNHVARIKELVREGFYDGIVFHRVIEGFMAQTG-------C 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + K + EF+ HVRG SM R + P+S S F I DA LD QY V+
Sbjct: 61 PQ-GTGTGGSGKKLKAEFNKEPHVRGTASMARAASPDSGDSQFFICFDDARFLDNQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKV +G E + K++
Sbjct: 120 GKVIEGMENVDKIK 133
>gi|442762087|gb|JAA73202.1| Putative similar to cyclophilin-type peptidyl-prolyl cis-trans
isomerase, partial [Ixodes ricinus]
Length = 160
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS 89
V T+ GDI+ + P++ ++ L YN F R KGF+ Q D G G+
Sbjct: 2 VTLHTDVGDIKIELFCEACPRSSENFMALCASDYYNGCLFHRNIKGFMVQTGDPTGTGKG 61
Query: 90 APMNEVQRVEAEKTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
+ + EK EF D+KH VRG++SM + PN+ AS F I PHLD +Y
Sbjct: 62 G-----ESIWGEK-FADEFRDDLKHNVRGVVSMAN-NGPNTNASQFFITYAKQPHLDLKY 114
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFVMPTER---ITIHSSYY 188
+FGKV G +TL +LE P + + R +TIH++ +
Sbjct: 115 TIFGKVIDGLDTLDELEKAPVNPKNYRPLRDIRLNAVTIHANPF 158
>gi|429334957|ref|ZP_19215604.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas putida CSV86]
gi|428760364|gb|EKX82631.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas putida CSV86]
Length = 185
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 35 TNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNE 94
T++G IE AP + + + V G YN F RV GF+ Q GG + M +
Sbjct: 31 TSFGKIEIELNAEKAPLSTKNFLQYVDSGFYNNTIFHRVIPGFMVQG----GGFTDQMVQ 86
Query: 95 VQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDA----PHLDGQYAVF 150
+ + G + + + RG LSM R S+PNSA S F I + D P D YAVF
Sbjct: 87 KDTKDPIRNEAG--NGLMNTRGTLSMARTSNPNSATSQFFINVADNDFLNPGRDAGYAVF 144
Query: 151 GKVTKGDETLRKLEGLPTR-KEGIFVMPTERITIHSSYYYD 190
GKVTKG E + ++ PT K+G+ +P + + I S+ D
Sbjct: 145 GKVTKGMEVVDQIVNSPTTVKKGMRDVPADPVYIKSAKRID 185
>gi|365857947|ref|ZP_09397918.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acetobacteraceae bacterium AT-5844]
gi|363715228|gb|EHL98685.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acetobacteraceae bacterium AT-5844]
Length = 191
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97
G + P +AP+ V+ I LVR G Y+ F RV +GF+AQ D G + +++
Sbjct: 43 GRVTIQLLPDLAPKHVERIKTLVRQGFYDGTPFHRVIEGFMAQGGDPTGTGTG-GSQLPD 101
Query: 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 157
+ AE + +++RG M R +PNSA S F I+ AP LDGQY ++G+V G
Sbjct: 102 LPAE---FSPPAKARYLRGTCGMARTMNPNSANSQFFIMFAPAPSLDGQYTIWGRVVSGM 158
Query: 158 ETLRKLE 164
E + K++
Sbjct: 159 EAVDKIK 165
>gi|374331558|ref|YP_005081742.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Pseudovibrio
sp. FO-BEG1]
gi|359344346|gb|AEV37720.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Pseudovibrio
sp. FO-BEG1]
Length = 168
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 24 PQLGSARVVFQTNY-----GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFV 78
P SA+ + T Y G +E P +AP+ V I +L R G Y+ F RV GF+
Sbjct: 9 PFTASAKDLENTIYLDLKDGRVEIALRPDLAPEHVKRIKQLTREGFYDGIVFHRVIDGFM 68
Query: 79 AQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLG 138
AQ D G +E+ ++AE FS RG L M R P+SA S F I+
Sbjct: 69 AQTGDPTG-TGMGGSELPDLKAE------FSKAPFKRGTLGMARSRSPHSANSQFFIMFN 121
Query: 139 DAPHLDGQYAVFGKVTKGDETLRKLE-GLPTR 169
+ L+GQY VFG+V G + + K++ G P R
Sbjct: 122 EGSWLNGQYTVFGEVVSGMDAVDKIKRGEPVR 153
>gi|384411376|ref|YP_005620741.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931750|gb|AEH62290.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 277
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VGGRSAPMN 93
G + P AP++V+ I LVR G YN F RV +GF+AQ D GG S P
Sbjct: 78 GRVVIQLRPDKAPKSVERIKTLVREGFYNGLRFHRVIEGFMAQTGDPKGDGSGGSSLP-- 135
Query: 94 EVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKV 153
+ EF+D+ HVRG +SM R + +SA S F I+ LDG+Y G+V
Sbjct: 136 ---------NLPAEFNDMPHVRGEVSMARAQEKDSANSQFFIVYQPTFSLDGEYTPIGRV 186
Query: 154 TKGDETLRKLE-GLPTRKEGIFVMPTERITIHSSYYYDTEME----ICEKERSVLKRRLT 208
G E + +E G P I V R +I S + E EK+ ++
Sbjct: 187 VSGMEYVDAVEKGEPPAHPSIIV----RASIGSDKIHPPTTEEVKAAVEKQEAINLAEQQ 242
Query: 209 ASVIEIERQRMKCF 222
E+ R M+
Sbjct: 243 KQEEEVRRNAMRSL 256
>gi|423096707|ref|ZP_17084503.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas fluorescens
Q2-87]
gi|397888597|gb|EJL05080.1| peptidyl-prolyl cis-trans isomerase A [Pseudomonas fluorescens
Q2-87]
Length = 184
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
+I L T++ A+ P + V+ T G IE P AP + + + V G Y
Sbjct: 4 KIALAAGTVLFAANLMAAP---APHVLLDTTNGQIEIELDPVKAPISTKNFLEYVDSGFY 60
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYS 124
N F RV GF+AQ GG + M Q+ E + + E S+ H VRG LSM R S
Sbjct: 61 NNTIFHRVIPGFMAQ----GGGFTTQM---QQKETKPPIKNEASNGLHNVRGTLSMARTS 113
Query: 125 DPNSAASSFSILLGDA----PHLDGQYAVFGKVTKGDETLRKL-EGLPTRKEGIFVMPTE 179
+P+SA S F I + D P D YAVF KV KG + + + T K+G+ +P +
Sbjct: 114 NPDSATSQFFINVADNAFLDPGRDAGYAVFAKVVKGMDVVDIIVNSQTTTKQGMQNVPID 173
Query: 180 RITIHSSYYYD 190
+ I S+ D
Sbjct: 174 PVLIKSAKRID 184
>gi|424870632|ref|ZP_18294294.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393166333|gb|EJC66380.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 190
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Query: 9 LTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
L L + G A +Q + Q G + P +AP+ V I L G Y+
Sbjct: 12 LYLASFAGDAFAQSADHY----LTIQLKDGPVVIQLMPEMAPKHVAQIEALAEKGEYDNV 67
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT----VVGEFSDVKHVRGILSMGRYS 124
F RV GF+AQ DV G + + + EFS VRG + M R
Sbjct: 68 AFHRVIDGFMAQTGDVKYGNMEKGFDASLAGTGSSDMSDIPAEFSKTPFVRGTVGMARSQ 127
Query: 125 DPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLE 164
DPNSA S F I+ D L+GQY V GKV G E + K++
Sbjct: 128 DPNSANSQFFIMFADGSFLNGQYTVVGKVVSGMENVDKIK 167
>gi|325662214|ref|ZP_08150829.1| hypothetical protein HMPREF0490_01567 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471466|gb|EGC74687.1| hypothetical protein HMPREF0490_01567 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 212
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 10 TLITLIGTASSQEDPQLGSARVVFQT-NYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTN 68
T T GT +E+ G V Q +YG I+ AP V + L + G Y+
Sbjct: 32 TTKTEKGTEGGEENLLTGKHHVEIQVKDYGTIKVELDADEAPIAVTNFVNLAKEGFYDGL 91
Query: 69 HFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFS------DVKHVRGILSMGR 122
F R+ GF+ Q D G + +++T+ GEFS ++ H RG +SM R
Sbjct: 92 TFHRIMSGFMIQGGDPRGDGTGG--------SDQTIKGEFSQNGVENNLLHTRGAISMAR 143
Query: 123 YSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKL--EGLPTRKEGIFVMPTER 180
+SA+S F I+ D+ HLDG YA FG VT+G + + ++ + PT G +PTE
Sbjct: 144 SRANDSASSQFFIVHEDSKHLDGSYAAFGYVTEGMDVVDRICEDAEPTDNNG--TIPTEE 201
Query: 181 ITIHSS 186
+ +S
Sbjct: 202 QPVMTS 207
>gi|384920974|ref|ZP_10020970.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Citreicella
sp. 357]
gi|384465155|gb|EIE49704.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Citreicella
sp. 357]
Length = 183
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 44 FYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGR-SAPMNEVQRVEAEK 102
+ VAPQ V I L + G Y+ F RV +GF+AQ DV G+ A M ++
Sbjct: 38 LFDDVAPQHVARITALAKAGEYDDVVFHRVIEGFMAQTGDVQYGKMGADMRMAGTGGSDM 97
Query: 103 T-VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKG 156
+ + EFSD RG + M R +PNSA S F ++ A HL+GQY V G+VT+G
Sbjct: 98 SDLAAEFSDRSFERGAVGMARSQNPNSANSQFFVMFAPATHLNGQYTVVGEVTEG 152
>gi|445469194|ref|ZP_21451044.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acinetobacter baumannii OIFC338]
gi|444774499|gb|ELW98580.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acinetobacter baumannii OIFC338]
Length = 169
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ V+ G Y F RV GF+AQ GG +A
Sbjct: 7 VEMQTNLGNIEIELYDDKAPMSVNNFKGYVKSGFYKETIFHRVIPGFMAQ----GGGMTA 62
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 63 NMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 120
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 121 GYAVFGKVVKGMDVVVRIVQAPTSNYGM 148
>gi|92117312|ref|YP_577041.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Nitrobacter
hamburgensis X14]
gi|91800206|gb|ABE62581.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type [Nitrobacter
hamburgensis X14]
Length = 186
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+V +T G I +AP+ + I +L R G YN F RV GF+AQ D
Sbjct: 32 IVIETTKGTIVIKLRTDIAPKHAERIKQLARDGFYNNVPFHRVMDGFMAQTGDGQNFNGT 91
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
++ ++AE FS+V RG++ M R P+SA S F I DA L+G+Y V
Sbjct: 92 GGSKYSNLKAE------FSNVPFKRGVVGMARAGSPDSANSQFFICFADASFLNGKYTVV 145
Query: 151 GKVTKGDETLRKLEGLPT 168
G V G + + KL+ P
Sbjct: 146 GDVVSGMDVVDKLKKAPA 163
>gi|156098496|ref|XP_001615280.1| cyclophilin [Plasmodium vivax Sal-1]
gi|148804154|gb|EDL45553.1| cyclophilin, putative [Plasmodium vivax]
Length = 167
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
+ TNYGDI+ + P+T + L G Y+ F R KGF Q D
Sbjct: 3 LTLHTNYGDIKVELFCYEVPKTCKNFLALCASGYYDNTKFHRNIKGFAIQGGD------- 55
Query: 91 PMNEVQRVEA--EKTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
P N + E+ K EF S +KH RGI+SM PN+ S F I PHL+G
Sbjct: 56 PTNTGKGGESIFGKYFDDEFQSTLKHDKRGIVSMANKGKPNTNGSQFFITYSRQPHLNGV 115
Query: 147 YAVFGKVTKGDETLRKLEGLPT--RKEGIFVMPTERITIHSS 186
Y VFGKV G + L LE P + + + + E +TIH++
Sbjct: 116 YPVFGKVIDGMDVLSVLENEPVGEKNKPVKDILIESVTIHAN 157
>gi|319956145|ref|YP_004167408.1| peptidyl-prolyl isomerase [Nitratifractor salsuginis DSM 16511]
gi|319418549|gb|ADV45659.1| Peptidylprolyl isomerase [Nitratifractor salsuginis DSM 16511]
Length = 176
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 6 RIFLTLITLIGTA-SSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGC 64
+IFL L+ + G + Q+ P VV TN GDI +P AP V + L + G
Sbjct: 4 KIFLALLVMGGALIAGQKAPI-----VVLHTNRGDITLKLFPKAAPLAVKNFVGLAKKGY 58
Query: 65 YNTNHFFRVDKGFVAQVADVV----GGRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSM 120
Y+ F RV KGF+ Q D GG S E + A V D ++ + +
Sbjct: 59 YDGTIFHRVIKGFMIQGGDPTGTGRGGTSIWGKEFKNEYAPNLVF----DRPYLLAMANR 114
Query: 121 GRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPT 168
G PN+ S F I + AP L+G Y +FGKV KG + + ++ +PT
Sbjct: 115 G----PNTNGSQFFITVAPAPWLNGGYTIFGKVIKGQKVVDAIDRVPT 158
>gi|365894348|ref|ZP_09432496.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
sp. STM 3843]
gi|365424886|emb|CCE05038.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
sp. STM 3843]
Length = 154
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ
Sbjct: 8 LILETTQGPVTIEMRPDLAPNHVARIKELVRDGFYDGIVFHRVIDGFMAQTG-------C 60
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVF 150
P + + K + EF+ HVRG SM R + P+S S F I DA LD QY V+
Sbjct: 61 P-HGTGTGGSGKKLKAEFNAEPHVRGTASMARAASPDSGDSQFFICFDDARFLDKQYTVW 119
Query: 151 GKVTKGDETLRKLE 164
GKVT+G E + K++
Sbjct: 120 GKVTEGMENVDKIK 133
>gi|304391769|ref|ZP_07373711.1| probable peptidyl-prolyl cis-trans isomerase [Ahrensia sp. R2A130]
gi|303295998|gb|EFL90356.1| probable peptidyl-prolyl cis-trans isomerase [Ahrensia sp. R2A130]
Length = 157
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADV----VG 86
++ T G++ AP+ I +L R Y+ F RV GF+AQ D +G
Sbjct: 11 LILDTTKGEVVIELLTEEAPEHAARIKELARENFYDGIIFHRVIDGFMAQGGDPTGSGMG 70
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G P + EF+D KHVRG+ SM R +PNSA S F I DA LD Q
Sbjct: 71 GSKKP-----------DLKAEFNDTKHVRGVCSMARSQNPNSANSQFFICFDDATFLDKQ 119
Query: 147 YAVFGKVTKGDETLRKL 163
Y +G+V +G E + +
Sbjct: 120 YTAWGRVIEGMENVDEF 136
>gi|268595049|ref|ZP_06129216.1| peptidyl-prolyl cis-trans isomerase A [Neisseria gonorrhoeae 35/02]
gi|385335967|ref|YP_005889914.1| putative peptidyl-prolyl cis-trans isomerase A [Neisseria
gonorrhoeae TCDC-NG08107]
gi|268548438|gb|EEZ43856.1| peptidyl-prolyl cis-trans isomerase A [Neisseria gonorrhoeae 35/02]
gi|317164510|gb|ADV08051.1| putative peptidyl-prolyl cis-trans isomerase A [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 185
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 24 PQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVAD 83
P + + RV+ +T+ G+I S A +TV + + R G Y+ F RV GFV Q
Sbjct: 19 PSMAATRVLMETDMGNIRLVLDESKASKTVANFVRYARKGFYDNTIFHRVIGGFVIQ--- 75
Query: 84 VVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPH 142
G + VQ+ +K V E + +K+ G ++M R +DP+SAA+ F I L D
Sbjct: 76 ---GGGLTEDLVQKA-TDKAVANESGNGLKNTVGTIAMARTADPDSAAAQFFINLADNGS 131
Query: 143 LD---GQYA--VFGKVTKGDETLRKLEGLPTRKEGIF 174
LD GQY VFG+V G +T+ K+ + T G++
Sbjct: 132 LDYKNGQYGYTVFGRVESGMDTVSKIARVKTATRGLY 168
>gi|148255730|ref|YP_001240315.1| peptidyl prolyl cis-trans isomerase [Bradyrhizobium sp. BTAi1]
gi|146407903|gb|ABQ36409.1| peptidyl prolyl cis-trans isomerase (rotamase B) [Bradyrhizobium
sp. BTAi1]
Length = 154
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 14/137 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG---G 87
++ +T G + P +AP V I +LVR G Y+ F RV GF+AQ G G
Sbjct: 8 LILETTQGPVTIEMRPDLAPGHVARIKELVREGFYDGIVFHRVIDGFMAQTGCPQGTGMG 67
Query: 88 RSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQY 147
S K + EF+ HVRG SM R ++P+S S F I DA LD QY
Sbjct: 68 GSG-----------KKLKAEFNAEPHVRGTASMARAANPDSGDSQFFICFDDARFLDKQY 116
Query: 148 AVFGKVTKGDETLRKLE 164
V+GKVT+G + + K++
Sbjct: 117 TVWGKVTEGMDNVDKIK 133
>gi|425771347|gb|EKV09792.1| Peptidyl-prolyl cis-trans isomerase, putative [Penicillium
digitatum Pd1]
gi|425776964|gb|EKV15161.1| Peptidyl-prolyl cis-trans isomerase, putative [Penicillium
digitatum PHI26]
Length = 627
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 16 GTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDK 75
GTA ++ + G+A + T +GDI YPS AP+ V++ R G YN F RV +
Sbjct: 465 GTAVTKA-AETGTA-AILHTTFGDIHLRLYPSAAPRAVENFVTHARNGYYNNTIFHRVIR 522
Query: 76 GFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD----VKHVRG-ILSMGRYSDPNSAA 130
F+ Q D G + E GEF+D +KH + LSM + PN+ A
Sbjct: 523 KFMIQGGDPQGDGTG---------GESIWGGEFADEFSVLKHDKPYTLSMAN-AGPNTNA 572
Query: 131 SSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171
S F I P LD ++ VFG+ +G + + K+E + T KE
Sbjct: 573 SQFFITTEKTPWLDNKHTVFGRAVQGLDIVHKIENVRTHKE 613
>gi|386743141|ref|YP_006216320.1| peptidyl-prolyl cis-trans isomerase A [Providencia stuartii MRSN
2154]
gi|384479834|gb|AFH93629.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Providencia
stuartii MRSN 2154]
Length = 190
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
RIF+ L+ + ++S G V T+ G+IE AP T ++ + V G Y
Sbjct: 4 RIFVPLLAVCAISASSLALAAGETYVKLVTSAGNIELELNNKKAPVTTENFLQYVNEGYY 63
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYS 124
N F RV GF+ Q GG + ++Q+ + + E + ++++RG +SM R +
Sbjct: 64 NGTTFHRVIPGFMIQ----GGGFN---KDLQQKQTRAPIKNEADNGLRNLRGTISMARTA 116
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
+ +SA S F I + D LD GQ YAVFGKV KG + + K+ + T G + +P
Sbjct: 117 NKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVVDKISKVKTENVGPYQNVPV 176
Query: 179 ERITIHSS 186
E I+I S+
Sbjct: 177 EPISIISA 184
>gi|407930882|ref|YP_006846525.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
TYTH-1]
gi|421625794|ref|ZP_16066639.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC098]
gi|407899463|gb|AFU36294.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii
TYTH-1]
gi|408697549|gb|EKL43058.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
OIFC098]
Length = 185
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 137 GYAVFGKVVKGMDVVDRIVQAPTSNYGM 164
>gi|310790691|gb|EFQ26224.1| cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
[Glomerella graminicola M1.001]
Length = 620
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQ----VADVVG 86
V T YGDI +P AP+ V++ + G YN F RV + F+ Q + D G
Sbjct: 471 AVIHTTYGDIHIRLFPDAAPKAVENFVTHSKRGYYNNTIFHRVIRKFMIQGGDPIGDGTG 530
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ 146
G S K EFS +KH + + PN+ S F I P LDG+
Sbjct: 531 GESI---------WGKEFADEFSSLKHDKPYTVSMANAGPNTNGSQFFITTEKTPWLDGK 581
Query: 147 YAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183
+ +FG+ T+G + + K+E T KE P E I I
Sbjct: 582 HTIFGRATQGLDVIHKIENARTYKE----KPEEDIKI 614
>gi|226952792|ref|ZP_03823256.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
[Acinetobacter sp. ATCC 27244]
gi|294648742|ref|ZP_06726202.1| peptidylprolyl isomerase [Acinetobacter haemolyticus ATCC 19194]
gi|226836413|gb|EEH68796.1| peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase)
[Acinetobacter sp. ATCC 27244]
gi|292825417|gb|EFF84160.1| peptidylprolyl isomerase [Acinetobacter haemolyticus ATCC 19194]
Length = 184
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
++F+T L+ ASS + V +T+ G+IE + AP + + V+ Y
Sbjct: 3 KLFITASLLL--ASSH---LFANTMVEMKTSMGNIEIELFDDKAPVSAKNFESYVKSNFY 57
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYS 124
F RV GF+ Q GG A M E + +V E S+ +K+ RG L+M R
Sbjct: 58 AGTIFHRVIPGFMVQG----GGLDANMVEKT---TKAPIVNEASNGLKNTRGTLAMARTR 110
Query: 125 DPNSAASSFSILLGDAPHL-----DGQYAVFGKVTKGDETLRKLEGLPTRKEGI 173
DPNSA S F I + D L D YAVFGKVTKG E + K+ +PT +G+
Sbjct: 111 DPNSATSQFFINVVDNSFLNRSAMDAGYAVFGKVTKGMEVVDKIVSVPTGNQGL 164
>gi|110680204|ref|YP_683211.1| cyclophilin type peptidyl-prolyl cis-trans isomerase [Roseobacter
denitrificans OCh 114]
gi|109456320|gb|ABG32525.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative
[Roseobacter denitrificans OCh 114]
Length = 168
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
++ + G + P VAPQ V + +L R G Y+ F RV GF+AQ DV G
Sbjct: 11 ILMELKGGTVTIQLLPDVAPQHVARMKELARAGHYDNVAFHRVIDGFMAQTGDVQHGD-- 68
Query: 91 PMNEVQRVEAEKT-------VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHL 143
M + + T V EFS V H RG L R S+P+SA S F I D L
Sbjct: 69 -MEDGFNLRMAGTGGSDLPNVPAEFSKVPHARGSLGAARSSNPDSANSQFFINFKDNDFL 127
Query: 144 DGQYAVFGKVTKGDE 158
+GQY V+G+V +G E
Sbjct: 128 NGQYTVYGQVIEGME 142
>gi|425743308|ref|ZP_18861396.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acinetobacter baumannii WC-323]
gi|425494463|gb|EKU60665.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Acinetobacter baumannii WC-323]
Length = 185
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 77/154 (50%), Gaps = 13/154 (8%)
Query: 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV 85
+ V +T+ G+IE + AP + + V+ Y F RV GF+ Q
Sbjct: 19 FANTMVDMKTSMGNIEIELFDDKAPVSAKNFESYVKSNFYTGTIFHRVIPGFMVQG---- 74
Query: 86 GGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYSDPNSAASSFSILLGDAPHL- 143
GG A M E + +V E S+ +K+ RG L+M R SDPNSA+S F I + D L
Sbjct: 75 GGLEANMVEK---STKAPIVNEASNGLKNTRGTLAMARTSDPNSASSQFFINVADNNFLN 131
Query: 144 ----DGQYAVFGKVTKGDETLRKLEGLPTRKEGI 173
D YAVFGKVTKG + + K+ +PT G+
Sbjct: 132 KSAMDAGYAVFGKVTKGMDIVDKIVSVPTGNYGM 165
>gi|184156357|ref|YP_001844696.1| peptidyl-prolyl cis-trans isomerase [Acinetobacter baumannii ACICU]
gi|183207951|gb|ACC55349.1| Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
[Acinetobacter baumannii ACICU]
Length = 185
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSA 90
V QTN G+IE Y AP +V++ V+ G Y F RV GF+AQ GG +A
Sbjct: 23 VEMQTNLGNIEIELYDDKAPMSVNNFKGYVKSGFYKETIFHRVIPGFMAQ----GGGMTA 78
Query: 91 PMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ---- 146
M E K G + + + RG L+M R S+P+SA S F I + D L+
Sbjct: 79 NMQEKTTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNP 136
Query: 147 -YAVFGKVTKGDETLRKLEGLPTRKEGI 173
YAVFGKV KG + + ++ PT G+
Sbjct: 137 GYAVFGKVVKGMDVVVRIVQAPTSNYGM 164
>gi|66534975|ref|XP_624114.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3-like [Apis
mellifera]
Length = 166
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 31 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVV----G 86
V T+ GDI+ + + P+T ++ L Y+ F R KGF+ Q D G
Sbjct: 8 VTLHTDIGDIKIELFCELCPKTCENFLALCASNYYDNCLFHRNIKGFIVQTGDPTHTGKG 67
Query: 87 GRSAPMNEVQRVEAEKTVVGEFSD-VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLD 144
G S + EF + ++H RG +SM + PN+ S F I G PHLD
Sbjct: 68 GTSI---------WNRPFEDEFKEELRHNARGFVSMAN-NGPNTNGSQFFITYGPQPHLD 117
Query: 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERI---TIHSS 186
+Y +FGK+ G ETL +LE LP + + RI TIH++
Sbjct: 118 LKYTLFGKIIDGLETLEQLEKLPVNPKNYRPLTETRINNVTIHAN 162
>gi|212711546|ref|ZP_03319674.1| hypothetical protein PROVALCAL_02619 [Providencia alcalifaciens DSM
30120]
gi|422020128|ref|ZP_16366668.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Providencia
alcalifaciens Dmel2]
gi|212685648|gb|EEB45176.1| hypothetical protein PROVALCAL_02619 [Providencia alcalifaciens DSM
30120]
gi|414101723|gb|EKT63320.1| peptidyl-prolyl cis-trans isomerase A (rotamase A) [Providencia
alcalifaciens Dmel2]
Length = 190
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 6 RIFLTLITLIGTASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCY 65
RIF+ L+ + +++ G V T+ G+IE AP + ++ + V G Y
Sbjct: 4 RIFVPLLAVCAMSTTSLALAAGETYVKLVTSAGNIELELNSKKAPVSTENFLQYVNEGYY 63
Query: 66 NTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYS 124
N F RV GF+ Q GG + E+Q+ + + E + ++++RG ++M R +
Sbjct: 64 NGTTFHRVIPGFMIQ----GGGFN---KELQQKQTRAPIANEADNGLRNLRGTIAMARSA 116
Query: 125 DPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPT 178
+ +SA S F I + D LD GQ YAVFGKV KG + K+ + T G + +P
Sbjct: 117 NKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISKVKTENVGPYQNVPV 176
Query: 179 ERITIHSS 186
E ITI S+
Sbjct: 177 EPITIISA 184
>gi|354593820|ref|ZP_09011863.1| putative peptidyl-prolyl cis-trans isomerase B [Commensalibacter
intestini A911]
gi|353672931|gb|EHD14627.1| putative peptidyl-prolyl cis-trans isomerase B [Commensalibacter
intestini A911]
Length = 149
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 38 GDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG----GRSAPMN 93
G ++ P +AP + + L G Y+ F RV +GF+AQ D G G P
Sbjct: 6 GIVKIKLRPDLAPLAAERLETLAAQGFYDDTPFHRVIEGFMAQGGDPSGTGMQGSDLP-- 63
Query: 94 EVQRVEAEKTVVGEFS-DVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGK 152
+ GEF+ D RG++ M R DPNSA S F I+ DAPHLDGQY + G+
Sbjct: 64 ---------DLKGEFTRDESFHRGMIGMARTMDPNSANSQFFIMFDDAPHLDGQYTIAGQ 114
Query: 153 VTKGDETLRKLE 164
V +G E + +++
Sbjct: 115 VIEGMEFVDQIK 126
>gi|149374969|ref|ZP_01892742.1| peptidyl-prolyl cis-trans isomerase A [Marinobacter algicola DG893]
gi|149360858|gb|EDM49309.1| peptidyl-prolyl cis-trans isomerase A [Marinobacter algicola DG893]
Length = 205
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 24/195 (12%)
Query: 4 VIRIFLTLITLIGTAS--SQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR 61
V++I L++ ++G A+ + E Q +V+ +T+ G IE P +AP+TV++ +
Sbjct: 11 VMQIALSVTFMLGFANCLAAEGQQSDLPQVIIETSEGAIEVTLRPDIAPKTVENFITYAK 70
Query: 62 LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQ-----RVEAEKTVVGEFSDVKHVRG 116
G Y F RV GF+ Q GG + + Q R EA+ T K++RG
Sbjct: 71 NGFYEGTLFHRVISGFMIQ----GGGFDQDLRQKQTRSPIRNEAKPT-------AKNLRG 119
Query: 117 ILSMGRYSDPNSAASSFSILLGDAPHLDG-----QYAVFGKVTKGDETLRKLEGLPT-RK 170
++M R S P+SA S F I L D L+ YAVFGKVT G + + T R
Sbjct: 120 TIAMARTSSPDSATSQFFINLTDNDFLNAGVRGPGYAVFGKVTGGMGVVDAIASKKTVRS 179
Query: 171 EGIFVMPTERITIHS 185
G+ +P E + I S
Sbjct: 180 RGMADVPQEPVIIRS 194
>gi|417555163|ref|ZP_12206232.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-81]
gi|421699053|ref|ZP_16138591.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
IS-58]
gi|421798138|ref|ZP_16234167.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-21]
gi|400391580|gb|EJP58627.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-81]
gi|404571975|gb|EKA77021.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
IS-58]
gi|410395196|gb|EKP47507.1| peptidyl-prolyl cis-trans isomerase A [Acinetobacter baumannii
Naval-21]
Length = 161
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 33 FQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPM 92
QTN G+IE Y AP +V++ ++ G Y F RV GF+AQ GG +A M
Sbjct: 1 MQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKETIFHRVIPGFMAQ----GGGMTANM 56
Query: 93 NEVQRVEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ-----Y 147
E K G + + + RG L+M R S+P+SA S F I + D L+ Y
Sbjct: 57 QEKSTRAPIKNEAG--NGIANTRGTLAMARTSNPDSATSQFFINVADNNFLNRSPGNPGY 114
Query: 148 AVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITI 183
AVFGKV KG + + ++ PT G+ +P + I I
Sbjct: 115 AVFGKVVKGMDVVDRIVQAPTSNYGMHQNVPKQPIKI 151
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,333,910,828
Number of Sequences: 23463169
Number of extensions: 136241227
Number of successful extensions: 285089
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5285
Number of HSP's successfully gapped in prelim test: 5532
Number of HSP's that attempted gapping in prelim test: 272530
Number of HSP's gapped (non-prelim): 11491
length of query: 223
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 86
effective length of database: 9,144,741,214
effective search space: 786447744404
effective search space used: 786447744404
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)