Query 027457
Match_columns 223
No_of_seqs 166 out of 1396
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 17:08:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027457.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027457hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zkc_A Peptidyl-prolyl CIS-tra 100.0 4.6E-50 1.6E-54 327.6 22.1 166 27-202 18-187 (197)
2 3bo7_A Peptidyl-prolyl CIS-tra 100.0 7.6E-50 2.6E-54 328.3 18.5 169 27-199 5-182 (201)
3 2poe_A Cyclophilin-like protei 100.0 1.5E-49 5E-54 322.4 19.4 163 26-197 14-182 (185)
4 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.6E-49 5.5E-54 316.1 18.6 156 30-195 2-161 (161)
5 2x7k_A Peptidyl-prolyl CIS-tra 100.0 6.9E-49 2.4E-53 313.6 19.0 156 24-189 7-165 (166)
6 2a2n_A Peptidylprolyl isomeras 100.0 1.8E-48 6.2E-53 313.7 19.2 161 18-188 11-175 (176)
7 2b71_A Cyclophilin-like protei 100.0 2E-48 6.8E-53 317.9 19.2 156 27-192 37-195 (196)
8 2fu0_A Cyclophilin, putative; 100.0 1.8E-48 6.3E-53 309.4 18.0 152 28-189 5-159 (160)
9 1v9t_A Cyclophilin B; beta bar 100.0 1.6E-48 5.5E-53 311.8 16.4 157 26-189 2-165 (166)
10 1w74_A Peptidyl-prolyl CIS-tra 100.0 3.7E-48 1.3E-52 315.3 18.6 156 21-189 16-191 (191)
11 2k7n_A Peptidyl-prolyl CIS-tra 100.0 4.1E-48 1.4E-52 317.2 18.9 162 23-194 6-170 (203)
12 3ich_A Peptidyl-prolyl CIS-tra 100.0 2.9E-48 9.9E-53 315.5 17.2 164 26-197 13-187 (188)
13 3s6m_A Peptidyl-prolyl CIS-tra 100.0 2.1E-48 7.2E-53 311.6 15.8 156 27-189 2-167 (167)
14 2r99_A Peptidyl-prolyl CIS-tra 100.0 1.5E-47 5.1E-52 307.8 20.4 157 24-189 7-172 (173)
15 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.4E-47 4.9E-52 307.5 19.8 157 25-190 7-172 (172)
16 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.2E-47 4.1E-52 309.4 18.9 156 26-189 8-177 (177)
17 2igv_A Peptidyl-prolyl CIS-tra 100.0 1.8E-47 6.3E-52 307.4 19.6 155 27-190 2-172 (173)
18 1lop_A Cyclophilin A; rotamase 100.0 2.5E-48 8.7E-53 310.1 13.7 154 30-190 1-164 (164)
19 2wfi_A Peptidyl-prolyl CIS-tra 100.0 2.8E-47 9.7E-52 307.8 19.8 157 25-189 6-179 (179)
20 1qng_A Peptidyl-prolyl CIS-tra 100.0 2.8E-47 9.4E-52 305.6 18.9 154 27-189 2-170 (170)
21 2z6w_A Peptidyl-prolyl CIS-tra 100.0 4E-47 1.4E-51 303.3 19.7 154 27-189 2-164 (165)
22 1a58_A Cyclophilin; isomerase, 100.0 4.3E-47 1.5E-51 306.3 19.3 155 27-189 5-176 (177)
23 2hq6_A Serologically defined c 100.0 4.4E-47 1.5E-51 307.7 19.1 158 27-195 23-185 (185)
24 2haq_A Cyclophilin; rotamase, 100.0 5.1E-47 1.8E-51 304.0 18.7 156 26-189 9-172 (172)
25 3rdd_A Peptidyl-prolyl CIS-tra 100.0 6E-47 2E-51 307.0 19.2 156 26-190 20-184 (184)
26 3pmp_A Cyclophilin A; peptidyl 100.0 8.9E-47 3.1E-51 301.1 19.6 153 28-189 2-163 (164)
27 2he9_A NK-tumor recognition pr 100.0 1.3E-46 4.6E-51 306.5 19.9 158 25-190 16-190 (192)
28 4fru_A Cyclophilin B, peptidyl 100.0 5.9E-47 2E-51 307.6 16.8 158 26-191 10-176 (185)
29 3bkp_A Cyclophilin; malaria, i 100.0 8.7E-47 3E-51 315.5 17.3 163 27-197 20-200 (232)
30 2poy_A Peptidyl-prolyl CIS-tra 100.0 2.4E-46 8.2E-51 303.6 18.7 156 24-188 15-186 (186)
31 3k2c_A Peptidyl-prolyl CIS-tra 100.0 6.6E-46 2.3E-50 302.8 20.5 159 23-190 22-191 (193)
32 1z81_A Cyclophilin; structural 100.0 5.5E-46 1.9E-50 309.5 17.7 157 25-189 56-229 (229)
33 2ose_A Probable peptidyl-proly 100.0 2.9E-46 1E-50 312.9 15.5 169 22-197 8-214 (234)
34 2c3b_A Ppiase, cyclophilin; is 100.0 6.7E-45 2.3E-49 292.1 12.0 148 35-189 19-172 (172)
35 1ihg_A Cyclophilin 40; ppiase 100.0 4.8E-43 1.7E-47 311.6 19.9 155 28-191 15-186 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1E-37 3.5E-42 274.9 7.6 139 26-165 168-344 (369)
37 2nnz_A Hypothetical protein; b 93.7 0.22 7.6E-06 38.3 7.2 104 28-163 29-142 (153)
38 3kop_A Uncharacterized protein 93.0 0.38 1.3E-05 37.9 7.6 32 29-60 22-55 (188)
39 1zx8_A Hypothetical protein TM 79.6 15 0.00052 27.3 9.0 101 29-163 13-123 (136)
40 2a3m_A COG3005: nitrate/TMAO r 40.9 10 0.00035 27.8 1.4 14 30-43 30-43 (130)
41 4ank_A Transthyretin; hormone 28.5 23 0.00079 26.7 1.6 16 31-46 35-54 (147)
42 2khf_A PLNJ; anti-microbial, b 27.9 12 0.0004 19.1 -0.1 16 53-68 3-18 (26)
43 4dz1_A DALS D-alanine transpor 24.3 38 0.0013 26.4 2.3 12 39-50 30-41 (259)
44 2k9u_B Filamin-binding LIM pro 23.2 50 0.0017 17.1 1.7 14 127-140 7-20 (26)
45 3m8t_A 'BLR6230 protein; subcl 20.1 48 0.0016 26.6 2.1 22 196-217 269-290 (294)
No 1
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=4.6e-50 Score=327.59 Aligned_cols=166 Identities=29% Similarity=0.442 Sum_probs=148.4
Q ss_pred CCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCCCCcchhhcccCcccc
Q 027457 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVV 105 (223)
Q Consensus 27 ~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~g~~~~ 105 (223)
...+|.|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.+ |.|.+ ...|..+.
T Consensus 18 ~~~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~------si~g~~f~ 91 (197)
T 1zkc_A 18 GSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGE------SYWGKPFK 91 (197)
T ss_dssp SCEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSCCC------BTTBSCBC
T ss_pred CCcEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCCCC------ccCCCccc
Confidence 467999999999999999999999999999999999999999999999999999999985 22221 11366788
Q ss_pred CC-cCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCC-CCCCCCccceE
Q 027457 106 GE-FSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE-GIFVMPTERIT 182 (223)
Q Consensus 106 ~e-~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~-~~~~~P~~~i~ 182 (223)
+| .+.++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++.. + +|.++|+
T Consensus 92 dE~~~~l~h~~~G~lsMAn-~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~---~P~~~i~ 167 (197)
T 1zkc_A 92 DEFRPNLSHTGRGILSMAN-SGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTD---RPKEEIR 167 (197)
T ss_dssp CCCCTTCCSCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTC---CBSSCCE
T ss_pred cccCcCcCCCCceEEEEec-CCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCC---CcCCCeE
Confidence 88 578999 899999999 689999999999999999999999999999999999999999999876 6 9999999
Q ss_pred EEeeeeecCCcchhHHHHHH
Q 027457 183 IHSSYYYDTEMEICEKERSV 202 (223)
Q Consensus 183 I~~~~vl~~~~~~~~~~~~~ 202 (223)
|.+|+++.+|+++++...++
T Consensus 168 I~~~~v~~dPf~d~~~~~~~ 187 (197)
T 1zkc_A 168 IDATTVFVDPYEEADAQIAQ 187 (197)
T ss_dssp EEEEEEEECTTHHHHHHHHH
T ss_pred EEEEEEEcCCcccHHHHHHH
Confidence 99999999988776654333
No 2
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=7.6e-50 Score=328.28 Aligned_cols=169 Identities=21% Similarity=0.331 Sum_probs=142.4
Q ss_pred CCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEee-----cCCC-CCCCC-Ccchhhcc
Q 027457 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA-----DVVG-GRSAP-MNEVQRVE 99 (223)
Q Consensus 27 ~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~G-----d~~~-~~~~~-~~~~~~~~ 99 (223)
.+.+|.|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|++||| |+.+ |.+.+ ........
T Consensus 5 ~~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~~~ 84 (201)
T 3bo7_A 5 KKGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSISGFP 84 (201)
T ss_dssp CCEEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCCSST
T ss_pred CceEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCcccccccccc
Confidence 46799999999999999999999999999999999999999999999999999999 9875 22211 11000112
Q ss_pred cCccccCC-cCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCCC
Q 027457 100 AEKTVVGE-FSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177 (223)
Q Consensus 100 ~g~~~~~e-~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~P 177 (223)
.|..+.+| .+.++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++..+ +|
T Consensus 85 ~g~~f~dE~~~~l~h~~~G~lsmA~-~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~---~P 160 (201)
T 3bo7_A 85 GGAPFEDEFDNRLVHQGIGVLSMAN-DGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKD---KP 160 (201)
T ss_dssp TCCCBCCCCCTTCCCCSTTEEEECC-SSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTS---CB
T ss_pred CCCcccCcccCCCCcCCCcEEEEee-CCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCC---Cc
Confidence 36788888 578999 899999999 6899999999999999999999999999999999999999999998877 99
Q ss_pred ccceEEEeeeeecCCcchhHHH
Q 027457 178 TERITIHSSYYYDTEMEICEKE 199 (223)
Q Consensus 178 ~~~i~I~~~~vl~~~~~~~~~~ 199 (223)
.++|+|.+|+++.+|+++++..
T Consensus 161 ~~~i~I~~~~v~~dPf~d~~~~ 182 (201)
T 3bo7_A 161 LKPPKVEEIIVFKNPFEDARKE 182 (201)
T ss_dssp SSCCBEEEEEEEECCC------
T ss_pred CCCeEEEEEEEEcCCccCHHHH
Confidence 9999999999999999887653
No 3
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=1.5e-49 Score=322.39 Aligned_cols=163 Identities=33% Similarity=0.507 Sum_probs=142.6
Q ss_pred CCCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCCCCcchhhcccCccc
Q 027457 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTV 104 (223)
Q Consensus 26 ~~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~g~~~ 104 (223)
.....|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...|..+
T Consensus 14 ~~~~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~------si~g~~~ 87 (185)
T 2poe_A 14 LYFQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGE------SIYGRYF 87 (185)
T ss_dssp -CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSCCC------BTTBSCB
T ss_pred CCceEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCCCC------ccCCCcc
Confidence 3467999999999999999999999999999999999999999999999999999999985 22211 1136678
Q ss_pred cCCc-CCCCC-CccEEEEecCCC---CCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCCCcc
Q 027457 105 VGEF-SDVKH-VRGILSMGRYSD---PNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTE 179 (223)
Q Consensus 105 ~~e~-~~l~h-~~G~lsma~~~~---~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~P~~ 179 (223)
.+|+ +.++| ++|+||||+.+. |++++|||||++++++|||++|+|||+|++||+||++|++++++..+ +|.+
T Consensus 88 ~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~---~P~~ 164 (185)
T 2poe_A 88 DDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSH---KPID 164 (185)
T ss_dssp CCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTS---CBSS
T ss_pred cccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCC---CcCC
Confidence 8885 78999 899999999543 99999999999999999999999999999999999999999998877 9999
Q ss_pred ceEEEeeeeecCCcchhH
Q 027457 180 RITIHSSYYYDTEMEICE 197 (223)
Q Consensus 180 ~i~I~~~~vl~~~~~~~~ 197 (223)
+|+|.+|+++.+|+++++
T Consensus 165 ~v~I~~~~i~~dPf~d~~ 182 (185)
T 2poe_A 165 EIIIKDIVIHSNPIADQE 182 (185)
T ss_dssp CCEEEEEEEECCC-----
T ss_pred CeEEEEEEEECCCCCCcc
Confidence 999999999999998764
No 4
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.6e-49 Score=316.06 Aligned_cols=156 Identities=35% Similarity=0.535 Sum_probs=140.9
Q ss_pred EEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCCCCcchhhcccCccccCC-
Q 027457 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGE- 107 (223)
Q Consensus 30 ~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~g~~~~~e- 107 (223)
.|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...|..+.+|
T Consensus 2 ~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~------si~g~~~~dE~ 75 (161)
T 2ok3_A 2 SVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGN------SIWGKKFEDEY 75 (161)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCC------CTTSSCBCCCC
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCCCC------cccCCcccccc
Confidence 689999999999999999999999999999999999999999999999999999985 22211 1135678888
Q ss_pred cCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCC-CCCCCCccceEEEe
Q 027457 108 FSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE-GIFVMPTERITIHS 185 (223)
Q Consensus 108 ~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~-~~~~~P~~~i~I~~ 185 (223)
.+.++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++.. + +|.++|+|.+
T Consensus 76 ~~~l~h~~~G~lsma~-~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~---~P~~~v~I~~ 151 (161)
T 2ok3_A 76 SEYLKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTY---RPLNDVHIKD 151 (161)
T ss_dssp CTTCCSCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTC---CBSSCCBEEE
T ss_pred CcCcCcCCCeEEEEec-CCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCC---CcCCCeEEEE
Confidence 468999 999999999 679999999999999999999999999999999999999999999876 6 9999999999
Q ss_pred eeeecCCcch
Q 027457 186 SYYYDTEMEI 195 (223)
Q Consensus 186 ~~vl~~~~~~ 195 (223)
|.++.+|+++
T Consensus 152 ~~i~~~Pf~d 161 (161)
T 2ok3_A 152 ITIHANPFAQ 161 (161)
T ss_dssp EEEECCSCC-
T ss_pred EEEecCCCCC
Confidence 9999998863
No 5
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=6.9e-49 Score=313.62 Aligned_cols=156 Identities=29% Similarity=0.468 Sum_probs=140.9
Q ss_pred CCCCCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCCCCcchhhcccCc
Q 027457 24 PQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEK 102 (223)
Q Consensus 24 ~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~g~ 102 (223)
+...+++|+|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...|.
T Consensus 7 ~~~~~~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~------si~g~ 80 (166)
T 2x7k_A 7 DSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGA------SIYGK 80 (166)
T ss_dssp TTCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSCCC------CTTSS
T ss_pred cccCCCEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCCCC------ccCCC
Confidence 444678999999999999999999999999999999999999999999999999999999875 22211 01366
Q ss_pred cccCCc-CCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCCCccc
Q 027457 103 TVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTER 180 (223)
Q Consensus 103 ~~~~e~-~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~P~~~ 180 (223)
.+++|+ +.++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++.+++.++ +|.++
T Consensus 81 ~~~dE~~~~l~h~~~G~lsmAn-~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~---~P~~~ 156 (166)
T 2x7k_A 81 QFEDELHPDLKFTGAGILAMAN-AGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQD---RPVDD 156 (166)
T ss_dssp CBCCCCCTTSCCCSTTEEEECB-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTS---CBSSC
T ss_pred ccccccccccCCCCCeEEEEee-CCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCC---CcCCC
Confidence 788885 68999 699999999 7799999999999999999999999999999999999999999998877 99999
Q ss_pred eEEEeeeee
Q 027457 181 ITIHSSYYY 189 (223)
Q Consensus 181 i~I~~~~vl 189 (223)
|+|.+|.++
T Consensus 157 i~I~~~~i~ 165 (166)
T 2x7k_A 157 VKIIKAYPS 165 (166)
T ss_dssp CEEEEEEEC
T ss_pred eEEEEEEEe
Confidence 999999986
No 6
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.8e-48 Score=313.66 Aligned_cols=161 Identities=32% Similarity=0.484 Sum_probs=142.3
Q ss_pred cCCCCCCCCCCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCCCCcchh
Q 027457 18 ASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQ 96 (223)
Q Consensus 18 ~~~~~~~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~ 96 (223)
+++...|......|.++|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ |.+.+
T Consensus 11 ~~~~~~~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~----- 85 (176)
T 2a2n_A 11 ATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGE----- 85 (176)
T ss_dssp --CCCSCCCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCC-----
T ss_pred cccCCCCCCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCCCC-----
Confidence 455667777888999999999999999999999999999999999999999999999999999999875 22211
Q ss_pred hcccCccccCCc-CCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCC-CCCC
Q 027457 97 RVEAEKTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTR-KEGI 173 (223)
Q Consensus 97 ~~~~g~~~~~e~-~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~-~~~~ 173 (223)
...|..+.+|+ +.++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++ .++
T Consensus 86 -si~g~~~~dE~~~~l~h~~~G~lsmA~-~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~- 162 (176)
T 2a2n_A 86 -SIWGGEFEDEFHSTLRHDRPYTLSMAN-AGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTD- 162 (176)
T ss_dssp -CTTSSCBCCCCCTTCCSCSSSEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTC-
T ss_pred -cccCCccccccccccccCCceEEEEEe-CCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCC-
Confidence 01366788884 47999 789999999 6799999999999999999999999999999999999999999998 455
Q ss_pred CCCCccceEEEeeee
Q 027457 174 FVMPTERITIHSSYY 188 (223)
Q Consensus 174 ~~~P~~~i~I~~~~v 188 (223)
+|.++|+|.+|.+
T Consensus 163 --~P~~~v~I~~v~v 175 (176)
T 2a2n_A 163 --KPYEDVSIINITV 175 (176)
T ss_dssp --CBSSCCBEEEEEE
T ss_pred --ccCCCeEEEEEEE
Confidence 9999999999976
No 7
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2e-48 Score=317.89 Aligned_cols=156 Identities=29% Similarity=0.443 Sum_probs=138.8
Q ss_pred CCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCCCCcchhhcccCcccc
Q 027457 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVV 105 (223)
Q Consensus 27 ~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~g~~~~ 105 (223)
.++.|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ |.+.+ ...|..+.
T Consensus 37 ~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~------si~g~~~~ 110 (196)
T 2b71_A 37 ERGYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGK------SIYGEYFE 110 (196)
T ss_dssp HSCEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSCCC------BTTBSCBC
T ss_pred CCcEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCCCC------ccCCCccc
Confidence 467999999999999999999999999999999999999999999999999999999985 22211 01356788
Q ss_pred CC-cCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCCCccceEE
Q 027457 106 GE-FSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183 (223)
Q Consensus 106 ~e-~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~P~~~i~I 183 (223)
+| .+.++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++..+ +|.++|+|
T Consensus 111 dE~~~~l~h~~~G~lsMAn-~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~---~P~~~i~I 186 (196)
T 2b71_A 111 DEINKELKHTGAGILSMSN-NGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATN---KPIFDLKI 186 (196)
T ss_dssp CCCCTTCCCCSTTEEEECC-SSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTC---CBSSCCEE
T ss_pred ccccCCcCcCCCeEEEEcc-CCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCC---CCCCCeEE
Confidence 88 578999 899999998 7899999999999999999999999999999999999999999998877 99999999
Q ss_pred EeeeeecCC
Q 027457 184 HSSYYYDTE 192 (223)
Q Consensus 184 ~~~~vl~~~ 192 (223)
.+|.++++|
T Consensus 187 ~~~~i~~dP 195 (196)
T 2b71_A 187 LRTSTAVNA 195 (196)
T ss_dssp EEEEC----
T ss_pred EEEEEecCC
Confidence 999999764
No 8
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.8e-48 Score=309.44 Aligned_cols=152 Identities=30% Similarity=0.387 Sum_probs=137.7
Q ss_pred CcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCCCCcchhhcccCccccC
Q 027457 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVG 106 (223)
Q Consensus 28 ~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~g~~~~~ 106 (223)
.+.|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ |.+.+ ...|..+++
T Consensus 5 ~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~------si~g~~~~d 78 (160)
T 2fu0_A 5 PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGE------SIWGNEFED 78 (160)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCC------CTTSSCBCC
T ss_pred CCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCCCC------cccCCCccc
Confidence 56899999999999999999999999999999999999999999999999999999975 22221 013667888
Q ss_pred Cc-CCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCCCccceEEE
Q 027457 107 EF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIH 184 (223)
Q Consensus 107 e~-~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~P~~~i~I~ 184 (223)
|+ +.++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++.++ +|.++|+|.
T Consensus 79 E~~~~l~h~~~G~lsmA~-~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~---~P~~~v~I~ 154 (160)
T 2fu0_A 79 EFFDHLNHSKPFMVSMAN-CGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRD---KPLEDIKIL 154 (160)
T ss_dssp CCBTTBCSSSSSEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS---CBSSCCBEE
T ss_pred cccCCcccCCceEEEEec-CCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCC---CcCCCeEEE
Confidence 84 57999 789999999 6899999999999999999999999999999999999999999998776 999999999
Q ss_pred eeeee
Q 027457 185 SSYYY 189 (223)
Q Consensus 185 ~~~vl 189 (223)
+|.++
T Consensus 155 ~~~v~ 159 (160)
T 2fu0_A 155 NIKIN 159 (160)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99886
No 9
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.6e-48 Score=311.82 Aligned_cols=157 Identities=31% Similarity=0.480 Sum_probs=139.6
Q ss_pred CCCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCCCCCCCCcchhhcccCcccc
Q 027457 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV 105 (223)
Q Consensus 26 ~~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~g~~~~ 105 (223)
.++++|+|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||++.+.+.. ..+..+.
T Consensus 2 ~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~~-------~~g~~~~ 74 (166)
T 1v9t_A 2 KGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQK-------KPNPPIK 74 (166)
T ss_dssp CCSCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCCBC-------CCCCCBC
T ss_pred CCCeEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCCCC-------CCCCccc
Confidence 467899999999999999999999999999999999999999999999999999999998743321 1356788
Q ss_pred CC-cCCCCCCccEEEEecCCCCCCCcceEEEEeCCCCCCCCC-----CcEEEEEEcChHHHHHHhcCCCCCCCC-CCCCc
Q 027457 106 GE-FSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ-----YAVFGKVTKGDETLRKLEGLPTRKEGI-FVMPT 178 (223)
Q Consensus 106 ~e-~~~l~h~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~-----~~vFG~Vv~G~~vl~~I~~~~~~~~~~-~~~P~ 178 (223)
+| +..++|.+|+||||+.++|++++|||||++.+++|||++ |+|||+|++||+||++|++++++..+. .++|.
T Consensus 75 dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~ 154 (166)
T 1v9t_A 75 NEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPS 154 (166)
T ss_dssp CCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEES
T ss_pred ccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcC
Confidence 88 567888999999999668999999999999999999998 999999999999999999999976210 12899
Q ss_pred cceEEEeeeee
Q 027457 179 ERITIHSSYYY 189 (223)
Q Consensus 179 ~~i~I~~~~vl 189 (223)
++|+|.+|+++
T Consensus 155 ~~v~I~~~~v~ 165 (166)
T 1v9t_A 155 KPVVILSATVL 165 (166)
T ss_dssp SCCBEEEEEEC
T ss_pred CCeEEEEEEEe
Confidence 99999999987
No 10
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=3.7e-48 Score=315.31 Aligned_cols=156 Identities=27% Similarity=0.457 Sum_probs=139.2
Q ss_pred CCCCCCCCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhh---------------cCCccCCceEEEEecCCEEEeecCC
Q 027457 21 QEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV---------------RLGCYNTNHFFRVDKGFVAQVADVV 85 (223)
Q Consensus 21 ~~~~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~---------------~~g~Y~g~~f~ri~~~~~iq~Gd~~ 85 (223)
...+++.+.+|+|+|+.|+|+||||++.||+||+||++|| +.++|+|+.||||+|+|+|||||+.
T Consensus 16 ~~~~~~~~~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~ 95 (191)
T 1w74_A 16 VTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT 95 (191)
T ss_dssp -----CCSEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTT
T ss_pred cccCCCCCeEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCC
Confidence 3445567899999999999999999999999999999999 4589999999999999999999986
Q ss_pred C-CCCCCCcchhhcccCccccCC-cCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEc--ChHHH
Q 027457 86 G-GRSAPMNEVQRVEAEKTVVGE-FSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK--GDETL 160 (223)
Q Consensus 86 ~-~~~~~~~~~~~~~~g~~~~~e-~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~--G~~vl 160 (223)
+ |.+. .|+.+++| .+.++| ++|+||||+ .+|++++|||||++.+++|||++|+|||+|++ ||+||
T Consensus 96 g~G~gg---------~g~~f~dE~~~~l~h~~~G~lsMAn-~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv 165 (191)
T 1w74_A 96 GTGRGG---------PGYKFADEFHPELQFDKPYLLAMAN-AGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVV 165 (191)
T ss_dssp SSSSCC---------SSCCBCCCCCTTCCSCSSSEEEECC-SSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHH
T ss_pred CCCCCC---------CCCccccccccCCCcCCCcEEEEee-CCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHH
Confidence 5 3332 36788999 578999 899999999 67999999999999999999999999999999 99999
Q ss_pred HHHhcCCCCCCCCCCCCccceEEEeeeee
Q 027457 161 RKLEGLPTRKEGIFVMPTERITIHSSYYY 189 (223)
Q Consensus 161 ~~I~~~~~~~~~~~~~P~~~i~I~~~~vl 189 (223)
++|++++++..+ +|.++|+|.+|+|+
T Consensus 166 ~~I~~~~t~~~~---~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 166 EAISKTATDGND---RPTDPVVIESITIS 191 (191)
T ss_dssp HHHHTSCBCTTS---CBSSCCEEEEEEEC
T ss_pred HHHHcCCcCCCC---CcCCCeEEEEEEEC
Confidence 999999998777 99999999999874
No 11
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=4.1e-48 Score=317.22 Aligned_cols=162 Identities=28% Similarity=0.439 Sum_probs=144.8
Q ss_pred CCCCCCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCCCCcchhhcccC
Q 027457 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAE 101 (223)
Q Consensus 23 ~~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~g 101 (223)
.+...+++|+|+|++|+|+||||++.||+||+||++||+.+||+++.||||+|+|+|||||+.+ +.+.+ ...+
T Consensus 6 ~~~~~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~------si~g 79 (203)
T 2k7n_A 6 PDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGA------SIYG 79 (203)
T ss_dssp CCSCCCSEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSCCC------TTSC
T ss_pred ccccCCCEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCCCC------ccCC
Confidence 3445678999999999999999999999999999999999999999999999999999999985 22211 0136
Q ss_pred ccccCCc-CCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCCCcc
Q 027457 102 KTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTE 179 (223)
Q Consensus 102 ~~~~~e~-~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~P~~ 179 (223)
..+++|+ +.++| ++|+||||+ .+||+++|||||++.+++|||++|+|||+|++||+||++|++++++..+ +|.+
T Consensus 80 ~~f~dE~~~~l~h~~~G~lsMAn-~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~---~P~~ 155 (203)
T 2k7n_A 80 KQFEDELHPDLKFTGAGILAMAN-AGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQD---RPVD 155 (203)
T ss_dssp SCBCCCCCCSSCCCSSCEEEEEE-SSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETT---EECC
T ss_pred CcccccccccccCCCCeEEEEee-CCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCC---CcCC
Confidence 6788885 68999 699999999 7899999999999999999999999999999999999999999998877 9999
Q ss_pred ceEEEeeeeecCCcc
Q 027457 180 RITIHSSYYYDTEME 194 (223)
Q Consensus 180 ~i~I~~~~vl~~~~~ 194 (223)
+|+|.+|++++.+..
T Consensus 156 ~V~I~~~~v~~~~~s 170 (203)
T 2k7n_A 156 DVKIIKAYPSGGGGS 170 (203)
T ss_dssp CCBEEEEEECCCCCC
T ss_pred CeEEEEEEEEecCCC
Confidence 999999999987553
No 12
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.9e-48 Score=315.53 Aligned_cols=164 Identities=28% Similarity=0.414 Sum_probs=143.0
Q ss_pred CCCcEEEEE-----EeceeEEEEEcCCCChhhHHHHHHhhc--CCc-cCCceEEEEecCCEEEeecCCCCCCCCCcchhh
Q 027457 26 LGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97 (223)
Q Consensus 26 ~~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 97 (223)
..+++|+|+ |+.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|++||||+..+.+....
T Consensus 13 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~---- 88 (188)
T 3ich_A 13 KVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGK---- 88 (188)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCC----
T ss_pred CcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCc----
Confidence 346788888 569999999999999999999999995 688 99999999999999999996554432110
Q ss_pred cccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCC
Q 027457 98 VEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176 (223)
Q Consensus 98 ~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~ 176 (223)
...|..+.+|...++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++.++ +
T Consensus 89 si~g~~f~dE~~~l~h~~~G~lsmAn-~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~---~ 164 (188)
T 3ich_A 89 SIYGERFPDENFKLKHYGPGWVSMAN-AGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRD---K 164 (188)
T ss_dssp BTTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS---C
T ss_pred cccCCcccccccCcccCCCeEEEEcc-CCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCC---e
Confidence 0135678888788999 899999999 6799999999999999999999999999999999999999999998877 9
Q ss_pred CccceEEEeeeee--cCCcchhH
Q 027457 177 PTERITIHSSYYY--DTEMEICE 197 (223)
Q Consensus 177 P~~~i~I~~~~vl--~~~~~~~~ 197 (223)
|.++|+|.+|+++ ++|+++++
T Consensus 165 P~~~v~I~~~~~l~~~~Pf~~~~ 187 (188)
T 3ich_A 165 PLKDVIIADCGKIEVEKPFAIAK 187 (188)
T ss_dssp BSSCEEEEEEEEEEEEEEEECCC
T ss_pred ECCCEEEEEeEEEecCCCCCCCC
Confidence 9999999999998 66776553
No 13
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=2.1e-48 Score=311.56 Aligned_cols=156 Identities=28% Similarity=0.455 Sum_probs=139.1
Q ss_pred CCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCCCCCCCCcchhhcccCccccC
Q 027457 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVG 106 (223)
Q Consensus 27 ~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~g~~~~~ 106 (223)
+++.|.|+|+.|+|+||||++.||+||+||++||+.+||+|+.||||+|+|+|||||++.+.+.. ..+..+++
T Consensus 2 p~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~~-------~~~~~~~~ 74 (167)
T 3s6m_A 2 PGSMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGLKQK-------PTDAPIAN 74 (167)
T ss_dssp CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTTEEC-------CCCCCBCC
T ss_pred CCcEEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCCCCC-------CCCCccCC
Confidence 36799999999999999999999999999999999999999999999999999999998643311 14667888
Q ss_pred C-cCCCCCCccEEEEecCCCCCCCcceEEEEeCCCCCCCCC--------CcEEEEEEcChHHHHHHhcCCCCCCC-CCCC
Q 027457 107 E-FSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ--------YAVFGKVTKGDETLRKLEGLPTRKEG-IFVM 176 (223)
Q Consensus 107 e-~~~l~h~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~--------~~vFG~Vv~G~~vl~~I~~~~~~~~~-~~~~ 176 (223)
| ...++|.+|+||||+.++|++++|||||++.+++|||++ |+|||+|++||+||++|++++++..+ ..++
T Consensus 75 E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~ 154 (167)
T 3s6m_A 75 EANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDV 154 (167)
T ss_dssp CGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTC
T ss_pred cccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCC
Confidence 8 567889999999999778999999999999999999998 99999999999999999999998721 1129
Q ss_pred CccceEEEeeeee
Q 027457 177 PTERITIHSSYYY 189 (223)
Q Consensus 177 P~~~i~I~~~~vl 189 (223)
|.++|+|.+|.|+
T Consensus 155 P~~~v~I~~~~il 167 (167)
T 3s6m_A 155 PNDDVVIEKAVVV 167 (167)
T ss_dssp BSSCCEEEEEEEC
T ss_pred cCCCeEEEEEEEC
Confidence 9999999999885
No 14
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=1.5e-47 Score=307.82 Aligned_cols=157 Identities=27% Similarity=0.387 Sum_probs=136.8
Q ss_pred CCCCCcEEEEE-----EeceeEEEEEcCCCChhhHHHHHHhhc--CCc-cCCceEEEEecCCEEEeecCCCCCCCCCcch
Q 027457 24 PQLGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95 (223)
Q Consensus 24 ~~~~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~ 95 (223)
..+.+++|+|+ |+.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|++||||+..+.+....
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~-- 84 (173)
T 2r99_A 7 KARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGK-- 84 (173)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCC--
T ss_pred cccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCC--
Confidence 44568899999 679999999999999999999999995 677 99999999999999999999865443110
Q ss_pred hhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCC
Q 027457 96 QRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIF 174 (223)
Q Consensus 96 ~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~ 174 (223)
...|..+.+|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++. +
T Consensus 85 --si~g~~f~dE~~~l~h~~~G~lsmA~-~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~-~-- 158 (173)
T 2r99_A 85 --SIYGKKFDDENFILKHTGPGLLSMAN-SGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKD-G-- 158 (173)
T ss_dssp --BTTBSCBCCCCCCSCCCSSSEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-C--
T ss_pred --ccCCCcccCcccCcccCCCcEEEEcc-CCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCC-C--
Confidence 0135567788778999 899999999 68999999999999999999999999999999999999999998865 4
Q ss_pred CCCccceEEEeeeee
Q 027457 175 VMPTERITIHSSYYY 189 (223)
Q Consensus 175 ~~P~~~i~I~~~~vl 189 (223)
+|.++|+|.+|+++
T Consensus 159 -~P~~~v~I~~cG~l 172 (173)
T 2r99_A 159 -KPKQKVIIADCGEY 172 (173)
T ss_dssp -CCSSCEEEEEEEEC
T ss_pred -CCCCCeEEEEeeeE
Confidence 89999999999987
No 15
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.4e-47 Score=307.55 Aligned_cols=157 Identities=27% Similarity=0.398 Sum_probs=137.6
Q ss_pred CCCCcEEEEE-----EeceeEEEEEcCCCChhhHHHHHHhhcC--Cc-cCCceEEEEecCCEEEeecCCCCCCCCCcchh
Q 027457 25 QLGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVRL--GC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQ 96 (223)
Q Consensus 25 ~~~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~nF~~L~~~--g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~ 96 (223)
.+.+++|+|+ |+.|+|+||||++.||+||+||++||++ |+ |+|+.||||+|+|++||||+..+.|.....
T Consensus 7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~s-- 84 (172)
T 2cmt_A 7 KRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKS-- 84 (172)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCB--
T ss_pred CCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCc--
Confidence 4557899999 7899999999999999999999999984 78 999999999999999999998654431110
Q ss_pred hcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCC
Q 027457 97 RVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFV 175 (223)
Q Consensus 97 ~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~ 175 (223)
..|..+.+|...++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++. +
T Consensus 85 --i~g~~f~dE~~~l~h~~~G~lsmA~-~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~-~--- 157 (172)
T 2cmt_A 85 --IYGRKFDDENFQLRHEGFGVLSMAN-SGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKS-G--- 157 (172)
T ss_dssp --TTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTT-C---
T ss_pred --cCCCcccccccCcccCCceEEEEee-CCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCC-C---
Confidence 135567888778999 789999999 68999999999999999999999999999999999999999999854 4
Q ss_pred CCccceEEEeeeeec
Q 027457 176 MPTERITIHSSYYYD 190 (223)
Q Consensus 176 ~P~~~i~I~~~~vl~ 190 (223)
+|.++|+|.+|+++.
T Consensus 158 ~P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 158 KVKEPVIISRCGELI 172 (172)
T ss_dssp CCSSCEEEEEEEEEC
T ss_pred CCCCCEEEEEeEeEC
Confidence 899999999999973
No 16
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.2e-47 Score=309.41 Aligned_cols=156 Identities=26% Similarity=0.414 Sum_probs=139.4
Q ss_pred CCCcEEEEEE-----eceeEEEEEcCCCChhhHHHHHHhhcCCc--------cCCceEEEEecCCEEEeecCCCCCCCCC
Q 027457 26 LGSARVVFQT-----NYGDIEFGFYPSVAPQTVDHIFKLVRLGC--------YNTNHFFRVDKGFVAQVADVVGGRSAPM 92 (223)
Q Consensus 26 ~~~~~v~~~t-----~~G~i~ieL~~~~aP~t~~nF~~L~~~g~--------Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 92 (223)
+.+++|+|++ +.|+|+||||++.||+||+||++||++++ |+|+.||||+|+|++||||+..+.+...
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg 87 (177)
T 1mzw_A 8 PVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGV 87 (177)
T ss_dssp CCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCC
T ss_pred CCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCC
Confidence 3588999996 59999999999999999999999999988 9999999999999999999976444311
Q ss_pred cchhhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCC
Q 027457 93 NEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171 (223)
Q Consensus 93 ~~~~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~ 171 (223)
. ...|..+.+|...++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++.+
T Consensus 88 ~----si~g~~f~dE~~~l~h~~~G~lsmAn-~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~ 162 (177)
T 1mzw_A 88 A----SIYRGPFADENFKLRHSAPGLLSMAN-SGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPN 162 (177)
T ss_dssp C----CTTSSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGG
T ss_pred C----ccCCCcccCcccccccCCCCEEEEcc-CCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCC
Confidence 1 0135677888778999 799999999 679999999999999999999999999999999999999999999877
Q ss_pred CCCCCCccceEEEeeeee
Q 027457 172 GIFVMPTERITIHSSYYY 189 (223)
Q Consensus 172 ~~~~~P~~~i~I~~~~vl 189 (223)
+ +|.++|+|.+|+++
T Consensus 163 ~---~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 163 N---KPKLPVVISQCGEM 177 (177)
T ss_dssp G---CBSSCEEEEEEEEC
T ss_pred C---CCCCCEEEEeceeC
Confidence 6 99999999999985
No 17
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=1.8e-47 Score=307.39 Aligned_cols=155 Identities=25% Similarity=0.389 Sum_probs=137.6
Q ss_pred CCcEEEEEEe-----ceeEEEEEcCCCChhhHHHHHHhhcC--C--------ccCCceEEEEecCCEEEeecCCCCCCCC
Q 027457 27 GSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVRL--G--------CYNTNHFFRVDKGFVAQVADVVGGRSAP 91 (223)
Q Consensus 27 ~~~~v~~~t~-----~G~i~ieL~~~~aP~t~~nF~~L~~~--g--------~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 91 (223)
.+++|+|+++ .|+|+||||++.||+||+||++||++ | ||+|+.||||+|+|++||||+..+.+..
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 81 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTG 81 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCC
Confidence 5789999987 99999999999999999999999986 5 7999999999999999999998654431
Q ss_pred CcchhhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCC
Q 027457 92 MNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRK 170 (223)
Q Consensus 92 ~~~~~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~ 170 (223)
... ..|..+.+|...++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++.
T Consensus 82 g~s----iyg~~f~dE~~~l~h~~~G~lsmAn-~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~ 156 (173)
T 2igv_A 82 GES----IYGEKFPDENFKEKHTGPGVLSMAN-AGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQS 156 (173)
T ss_dssp CCB----TTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT
T ss_pred CCc----cCCCcccCcccccCCCCCeEEEEee-CCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCC
Confidence 110 135567888778999 799999999 68999999999999999999999999999999999999999999854
Q ss_pred CCCCCCCccceEEEeeeeec
Q 027457 171 EGIFVMPTERITIHSSYYYD 190 (223)
Q Consensus 171 ~~~~~~P~~~i~I~~~~vl~ 190 (223)
+ +|.++|+|.+|++++
T Consensus 157 -~---~P~~~v~I~~~g~l~ 172 (173)
T 2igv_A 157 -G---KPVKDCMIADCGQLK 172 (173)
T ss_dssp -S---CCSSCEEEEEEEEEC
T ss_pred -C---CCCCCEEEEEeEEEc
Confidence 4 899999999999985
No 18
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=2.5e-48 Score=310.08 Aligned_cols=154 Identities=31% Similarity=0.468 Sum_probs=137.1
Q ss_pred EEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCCCCCCCCcchhhcccCccccCC-c
Q 027457 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGE-F 108 (223)
Q Consensus 30 ~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~g~~~~~e-~ 108 (223)
+|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||++.+.+.. ..+..+++| +
T Consensus 1 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~g~~-------~~g~~~~dE~~ 73 (164)
T 1lop_A 1 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQK-------ATKEPIKNEAN 73 (164)
T ss_dssp CEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETTTEEC-------CCCCCBCCCCC
T ss_pred CEEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccCCCcC-------CCCCccccccc
Confidence 48999999999999999999999999999999999999999999999999999998543311 146788888 4
Q ss_pred CCCCCCccEEEEecCCCCCCCcceEEEEeCCCCCCCCC--------CcEEEEEEcChHHHHHHhcCCCCCC-CCCCCCcc
Q 027457 109 SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ--------YAVFGKVTKGDETLRKLEGLPTRKE-GIFVMPTE 179 (223)
Q Consensus 109 ~~l~h~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~--------~~vFG~Vv~G~~vl~~I~~~~~~~~-~~~~~P~~ 179 (223)
+.++|.+|+||||++++|++++|||||++++++|||++ |+|||+|++||+||++|++++++.. +..++|.+
T Consensus 74 ~~l~~~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~ 153 (164)
T 1lop_A 74 NGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKE 153 (164)
T ss_dssp SSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESS
T ss_pred cccccCccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCC
Confidence 67899999999998678999999999999999999998 9999999999999999999999752 01128999
Q ss_pred ceEEEeeeeec
Q 027457 180 RITIHSSYYYD 190 (223)
Q Consensus 180 ~i~I~~~~vl~ 190 (223)
+|+|.+|++++
T Consensus 154 ~v~I~~~~v~~ 164 (164)
T 1lop_A 154 DVIIESVTVSE 164 (164)
T ss_dssp CCEEEEEEECC
T ss_pred CeEEEEEEEeC
Confidence 99999999873
No 19
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=2.8e-47 Score=307.75 Aligned_cols=157 Identities=28% Similarity=0.374 Sum_probs=138.0
Q ss_pred CCCCcEEEEEE-----eceeEEEEEcCCCChhhHHHHHHhhc-----------CCccCCceEEEEecCCEEEeecCCCCC
Q 027457 25 QLGSARVVFQT-----NYGDIEFGFYPSVAPQTVDHIFKLVR-----------LGCYNTNHFFRVDKGFVAQVADVVGGR 88 (223)
Q Consensus 25 ~~~~~~v~~~t-----~~G~i~ieL~~~~aP~t~~nF~~L~~-----------~g~Y~g~~f~ri~~~~~iq~Gd~~~~~ 88 (223)
...+++|+|+. +.|+|+||||++.||+||+||++||+ .++|+|+.||||+|+|+|||||+..+.
T Consensus 6 ~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~ 85 (179)
T 2wfi_A 6 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGN 85 (179)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCC
Confidence 34588999984 69999999999999999999999996 468999999999999999999997644
Q ss_pred CCCCcchhhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCC
Q 027457 89 SAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLP 167 (223)
Q Consensus 89 ~~~~~~~~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~ 167 (223)
+.... ...|..+.+|...++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++
T Consensus 86 g~gg~----si~g~~f~dE~~~~~h~~~G~lsMAn-~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~ 160 (179)
T 2wfi_A 86 GRGGE----SIYGGFFEDESFAVKHNKEFLLSMAN-RGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQK 160 (179)
T ss_dssp SSCCC----CTTSSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCC
T ss_pred CCCCC----cccCCcccccccCcCcCCCeEEEEEe-CCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCC
Confidence 43111 0135667888778999 899999999 68999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccceEEEeeeee
Q 027457 168 TRKEGIFVMPTERITIHSSYYY 189 (223)
Q Consensus 168 ~~~~~~~~~P~~~i~I~~~~vl 189 (223)
++..+ +|.++|+|.+|+++
T Consensus 161 t~~~~---~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 161 TDAAS---KPFAEVRILSCGEL 179 (179)
T ss_dssp BCTTS---CBSSCEEEEEEEEC
T ss_pred CCCCC---CCCCCeEEEeCeeC
Confidence 98877 99999999999985
No 20
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=2.8e-47 Score=305.57 Aligned_cols=154 Identities=28% Similarity=0.450 Sum_probs=137.0
Q ss_pred CCcEEEEEEe-----ceeEEEEEcCCCChhhHHHHHHhhc-CCc--------cCCceEEEEecCCEEEeecCCCCCCCCC
Q 027457 27 GSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVR-LGC--------YNTNHFFRVDKGFVAQVADVVGGRSAPM 92 (223)
Q Consensus 27 ~~~~v~~~t~-----~G~i~ieL~~~~aP~t~~nF~~L~~-~g~--------Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 92 (223)
.+++|+|+++ .|+|+||||++.||+||+||++||+ .++ |+|+.||||+|+|++||||+..+.+...
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg 81 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGG 81 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCC
Confidence 4789999987 9999999999999999999999998 488 9999999999999999999976544311
Q ss_pred cchhhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCC
Q 027457 93 NEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171 (223)
Q Consensus 93 ~~~~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~ 171 (223)
. ...|..+.+|...++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|+++++ .+
T Consensus 82 ~----si~g~~f~dE~~~l~h~~~G~lsmAn-~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~ 155 (170)
T 1qng_A 82 E----SIYGRSFTDENFNMKHDQPGLLSMAN-AGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KS 155 (170)
T ss_dssp C----BTTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TT
T ss_pred c----cccCCcccccccccccCCCCEEEEee-cCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CC
Confidence 1 0135567888778999 799999999 789999999999999999999999999999999999999999999 44
Q ss_pred CCCCCCccceEEEeeeee
Q 027457 172 GIFVMPTERITIHSSYYY 189 (223)
Q Consensus 172 ~~~~~P~~~i~I~~~~vl 189 (223)
+ +|.++|+|.+|+++
T Consensus 156 ~---~P~~~v~I~~cG~l 170 (170)
T 1qng_A 156 G---YVKRSVVITDCGEL 170 (170)
T ss_dssp C---CCSSCEEEEEEEEC
T ss_pred C---CCCCCeEEEeceeC
Confidence 5 99999999999985
No 21
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=4e-47 Score=303.26 Aligned_cols=154 Identities=26% Similarity=0.401 Sum_probs=136.4
Q ss_pred CCcEEEEEE-----eceeEEEEEcCCCChhhHHHHHHhhc--CCc-cCCceEEEEecCCEEEeecCCCCCCCCCcchhhc
Q 027457 27 GSARVVFQT-----NYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRV 98 (223)
Q Consensus 27 ~~~~v~~~t-----~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~ 98 (223)
.+++|+|++ +.|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|++||||+..+++.... .
T Consensus 2 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~----s 77 (165)
T 2z6w_A 2 GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGK----S 77 (165)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCC----B
T ss_pred CCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCC----c
Confidence 468999997 58999999999999999999999999 889 99999999999999999999765443110 0
Q ss_pred ccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCCC
Q 027457 99 EAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177 (223)
Q Consensus 99 ~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~P 177 (223)
..|..+++|...++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++.++. ++ +|
T Consensus 78 i~g~~f~dE~~~l~h~~~G~lsmA~-~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~-~~---~P 152 (165)
T 2z6w_A 78 IYGSRFPDENFTLKHVGPGVLSMAN-AGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSK-SG---RT 152 (165)
T ss_dssp TTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCT-TS---CC
T ss_pred ccCCcccCcccccccCCCCEEEEee-CCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCC-CC---CC
Confidence 135567888788999 789999999 6799999999999999999999999999999999999999999864 44 99
Q ss_pred ccceEEEeeeee
Q 027457 178 TERITIHSSYYY 189 (223)
Q Consensus 178 ~~~i~I~~~~vl 189 (223)
.++|+|.+|+++
T Consensus 153 ~~~v~I~~~g~l 164 (165)
T 2z6w_A 153 SKKIVITDCGQL 164 (165)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCcEEEEEeEEE
Confidence 999999999987
No 22
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=4.3e-47 Score=306.29 Aligned_cols=155 Identities=30% Similarity=0.386 Sum_probs=138.0
Q ss_pred CCcEEEEEE-----eceeEEEEEcCCCChhhHHHHHHhhcC--------C---ccCCceEEEEecCCEEEeecCCCCCCC
Q 027457 27 GSARVVFQT-----NYGDIEFGFYPSVAPQTVDHIFKLVRL--------G---CYNTNHFFRVDKGFVAQVADVVGGRSA 90 (223)
Q Consensus 27 ~~~~v~~~t-----~~G~i~ieL~~~~aP~t~~nF~~L~~~--------g---~Y~g~~f~ri~~~~~iq~Gd~~~~~~~ 90 (223)
.+++|+|++ +.|+|+||||++.||+||+||++||++ | +|+|+.||||+|+|+|||||+..+++.
T Consensus 5 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 84 (177)
T 1a58_A 5 DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGT 84 (177)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSS
T ss_pred CCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCC
Confidence 478999996 499999999999999999999999984 4 899999999999999999999764443
Q ss_pred CCcchhhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCC
Q 027457 91 PMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTR 169 (223)
Q Consensus 91 ~~~~~~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~ 169 (223)
.... ..|..+.+|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++
T Consensus 85 gg~s----i~g~~f~dE~~~~~h~~~G~lsmAn-~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~ 159 (177)
T 1a58_A 85 GGES----IYGGMFDDEEFVMKHDEPFVVSMAN-KGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTN 159 (177)
T ss_dssp CCCC----TTSSCBCCCCCCSCCCSSSEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC
T ss_pred CCCc----ccCCcccCcccCcccCCCeEEEEee-CCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCC
Confidence 1110 135667788778899 899999999 6899999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCccceEEEeeeee
Q 027457 170 KEGIFVMPTERITIHSSYYY 189 (223)
Q Consensus 170 ~~~~~~~P~~~i~I~~~~vl 189 (223)
..+ +|.++|+|.+|+++
T Consensus 160 ~~~---~P~~~v~I~~~G~l 176 (177)
T 1a58_A 160 SKN---RPLADVVILNCGEL 176 (177)
T ss_dssp TTS---CBSSCEEEEEEEEE
T ss_pred CCC---cCCCCeEEEEeEEE
Confidence 877 99999999999987
No 23
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=4.4e-47 Score=307.73 Aligned_cols=158 Identities=26% Similarity=0.439 Sum_probs=140.5
Q ss_pred CCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCCCCcchhhcccCcccc
Q 027457 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVV 105 (223)
Q Consensus 27 ~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~g~~~~ 105 (223)
.+++|+|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...|..+.
T Consensus 23 ~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~------si~g~~~~ 96 (185)
T 2hq6_A 23 TNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGE------SIYGAPFK 96 (185)
T ss_dssp CBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSCCC------CTTSSCBC
T ss_pred CCCEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCCCC------cccCCccc
Confidence 477999999999999999999999999999999999999999999999999999999975 22211 11366788
Q ss_pred CCc-CCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHH--HHHhcCCCCCCCCCCCCccce
Q 027457 106 GEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETL--RKLEGLPTRKEGIFVMPTERI 181 (223)
Q Consensus 106 ~e~-~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl--~~I~~~~~~~~~~~~~P~~~i 181 (223)
+|+ +.++| .+|+||||+ .+|++++|||||+++++++||++|+|||+|+ ||+++ ++|++++++.++ +|.++|
T Consensus 97 dE~~~~l~h~~~G~lsMA~-~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~---~P~~~v 171 (185)
T 2hq6_A 97 DEFHSRLRFNRRGLVAMAN-AGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDE---RPHNPH 171 (185)
T ss_dssp CCCBTTBCSCSSSEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTS---CBSSCC
T ss_pred cccccCcccCCCeEEEEcc-CCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCC---CCCCCe
Confidence 884 57898 899999999 6799999999999999999999999999999 88874 689999998777 999999
Q ss_pred EEEeeeeecCCcch
Q 027457 182 TIHSSYYYDTEMEI 195 (223)
Q Consensus 182 ~I~~~~vl~~~~~~ 195 (223)
+|.+|+++++|+++
T Consensus 172 ~I~~~~v~~~Pf~d 185 (185)
T 2hq6_A 172 KIKSCEVLFNPFDD 185 (185)
T ss_dssp EEEEEEEEECTTC-
T ss_pred EEEEEEEeCCCCCC
Confidence 99999999998864
No 24
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=5.1e-47 Score=304.03 Aligned_cols=156 Identities=29% Similarity=0.409 Sum_probs=138.6
Q ss_pred CCCcEEEEE-----EeceeEEEEEcCCCChhhHHHHHHhh--cCCc-cCCceEEEEecCCEEEeecCCCCCCCCCcchhh
Q 027457 26 LGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLV--RLGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97 (223)
Q Consensus 26 ~~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~nF~~L~--~~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 97 (223)
+.+++|+|+ |+.|+|+||||++.||+||+||++|| +.|+ |+|+.||||+|+|++||||+..+++....
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~---- 84 (172)
T 2haq_A 9 EVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGK---- 84 (172)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCC----
T ss_pred CCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCc----
Confidence 457899988 56899999999999999999999999 6889 99999999999999999996654432110
Q ss_pred cccCccccCCcCCCCCCccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCCC
Q 027457 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177 (223)
Q Consensus 98 ~~~g~~~~~e~~~l~h~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~P 177 (223)
...|..+++|...++|.+|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++.++ +|
T Consensus 85 si~g~~f~dE~~~l~h~~G~lsmAn-~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~---~P 160 (172)
T 2haq_A 85 SIYGEKFADENLNVKHFVGALSMAN-AGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHD---RP 160 (172)
T ss_dssp CSSSSCBCCCCCCSCCCTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG---CB
T ss_pred cccCCcccCcCCCcccCceEEEEcc-CCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCC---cC
Confidence 0135678888888999999999999 6799999999999999999999999999999999999999999998877 99
Q ss_pred ccceEEEeeeee
Q 027457 178 TERITIHSSYYY 189 (223)
Q Consensus 178 ~~~i~I~~~~vl 189 (223)
.++|+|.+|+++
T Consensus 161 ~~~v~I~~~g~l 172 (172)
T 2haq_A 161 VKPVKIVASGEL 172 (172)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEEeEEC
Confidence 999999999985
No 25
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=6e-47 Score=306.98 Aligned_cols=156 Identities=27% Similarity=0.401 Sum_probs=137.1
Q ss_pred CCCcEEEEEEe-----ceeEEEEEcCCCChhhHHHHHHhhcCCc---cCCceEEEEecCCEEEeecCCCCCCCCCcchhh
Q 027457 26 LGSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVRLGC---YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97 (223)
Q Consensus 26 ~~~~~v~~~t~-----~G~i~ieL~~~~aP~t~~nF~~L~~~g~---Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 97 (223)
+.+++|+|+|+ .|+|+||||++.||+||+||++||++++ |+|+.||||+|+|++||||+..+.+....
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~---- 95 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGK---- 95 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCC----
T ss_pred CCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCc----
Confidence 46889999988 9999999999999999999999997654 99999999999999999997765443211
Q ss_pred cccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCC
Q 027457 98 VEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176 (223)
Q Consensus 98 ~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~ 176 (223)
...+..+.+|...++| .+|+||||+ .+|++++|||||+++++++||++|+|||+|++||+||++|++++++. + +
T Consensus 96 si~g~~~~de~~~l~h~~~G~lsmA~-~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~-g---~ 170 (184)
T 3rdd_A 96 SIYGEKFEDENFILKHTGPGILSMAN-AGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRN-G---K 170 (184)
T ss_dssp BTTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-S---C
T ss_pred ccCCCcccCcccccccCCCcEEEEEe-CCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCC-C---C
Confidence 1135567777778999 899999999 78999999999999999999999999999999999999999998754 4 8
Q ss_pred CccceEEEeeeeec
Q 027457 177 PTERITIHSSYYYD 190 (223)
Q Consensus 177 P~~~i~I~~~~vl~ 190 (223)
|.++|+|.+|++++
T Consensus 171 P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 171 TSKKITIADCGQLE 184 (184)
T ss_dssp CSSCEEEEEEEECC
T ss_pred CcCCeEEEeCeEEC
Confidence 99999999999984
No 26
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=8.9e-47 Score=301.15 Aligned_cols=153 Identities=29% Similarity=0.393 Sum_probs=135.9
Q ss_pred CcEEEEE-----EeceeEEEEEcCCCChhhHHHHHHhhc--CCc-cCCceEEEEecCCEEEeecCCCCCCCCCcchhhcc
Q 027457 28 SARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99 (223)
Q Consensus 28 ~~~v~~~-----t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~ 99 (223)
+++|+|+ |+.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|++||||+..+.+.... ..
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~----si 77 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGK----SI 77 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCC----BT
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCc----cc
Confidence 6788887 779999999999999999999999999 788 99999999999999999996654443111 11
Q ss_pred cCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCCCc
Q 027457 100 AEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPT 178 (223)
Q Consensus 100 ~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~P~ 178 (223)
.|..+.+|...++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++. + +|.
T Consensus 78 ~g~~~~dE~~~l~h~~~G~lsma~-~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~-~---~P~ 152 (164)
T 3pmp_A 78 YGEKFADENFQVKHTKPGLLSMAN-AGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSAS-G---KTN 152 (164)
T ss_dssp TBSCBCCCCCCSCCCSTTEEEECB-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-C---CCS
T ss_pred CCccccccccccCcCCCcEEEEee-CCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCC-C---Ccc
Confidence 36677888888999 789999999 77999999999999999999999999999999999999999999974 4 899
Q ss_pred cceEEEeeeee
Q 027457 179 ERITIHSSYYY 189 (223)
Q Consensus 179 ~~i~I~~~~vl 189 (223)
++|+|.+|+++
T Consensus 153 ~~v~I~~cg~l 163 (164)
T 3pmp_A 153 ATIKITDCGTV 163 (164)
T ss_dssp SCEEEEEEEEC
T ss_pred cCEEEEeCeEE
Confidence 99999999997
No 27
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-46 Score=306.52 Aligned_cols=158 Identities=28% Similarity=0.373 Sum_probs=138.2
Q ss_pred CCCCcEEEEEE-----eceeEEEEEcCCCChhhHHHHHHhhc-----------CCccCCceEEEEecCCEEEeecCCCCC
Q 027457 25 QLGSARVVFQT-----NYGDIEFGFYPSVAPQTVDHIFKLVR-----------LGCYNTNHFFRVDKGFVAQVADVVGGR 88 (223)
Q Consensus 25 ~~~~~~v~~~t-----~~G~i~ieL~~~~aP~t~~nF~~L~~-----------~g~Y~g~~f~ri~~~~~iq~Gd~~~~~ 88 (223)
...+++|+|+. +.|+|+||||++.||+||+||++||+ .++|+|+.||||+|+|+|||||+..++
T Consensus 16 ~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~ 95 (192)
T 2he9_A 16 PRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGN 95 (192)
T ss_dssp ---CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred ccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCC
Confidence 34678999874 69999999999999999999999995 468999999999999999999997644
Q ss_pred CCCCcchhhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCC
Q 027457 89 SAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLP 167 (223)
Q Consensus 89 ~~~~~~~~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~ 167 (223)
+.... ...|..+.+|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++
T Consensus 96 G~gg~----siyg~~f~dE~~~l~h~~~G~lsMAn-~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~ 170 (192)
T 2he9_A 96 GKGGE----SIYGGYFKDENFILKHDRAFLLSMAN-RGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLK 170 (192)
T ss_dssp SSCCC----CTTSSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CCCCC----cccCCcccCccccCCCCCCeEEEEEe-CCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCC
Confidence 43111 1135677888778999 899999999 67999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccceEEEeeeeec
Q 027457 168 TRKEGIFVMPTERITIHSSYYYD 190 (223)
Q Consensus 168 ~~~~~~~~~P~~~i~I~~~~vl~ 190 (223)
++..+ +|.++|+|.+|+++.
T Consensus 171 t~~~~---~P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 171 TDAAS---RPYADVRVIDCGVLA 190 (192)
T ss_dssp BCTTS---CBSSCEEEEEEEECC
T ss_pred cCCCC---CCcCCeEEEEeEEEc
Confidence 98877 999999999999984
No 28
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=5.9e-47 Score=307.56 Aligned_cols=158 Identities=28% Similarity=0.391 Sum_probs=140.3
Q ss_pred CCCcEEEEEEe-----ceeEEEEEcCCCChhhHHHHHHhhcC--C-ccCCceEEEEecCCEEEeecCCCCCCCCCcchhh
Q 027457 26 LGSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVRL--G-CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97 (223)
Q Consensus 26 ~~~~~v~~~t~-----~G~i~ieL~~~~aP~t~~nF~~L~~~--g-~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 97 (223)
.-+++|+|+++ .|+|+||||++.||+||+||++||++ | +|+|+.||||+|+|++||||+..+.+....
T Consensus 10 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~---- 85 (185)
T 4fru_A 10 KVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGK---- 85 (185)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCC----
T ss_pred CcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCc----
Confidence 35789999987 99999999999999999999999975 6 799999999999999999999865543211
Q ss_pred cccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCC
Q 027457 98 VEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176 (223)
Q Consensus 98 ~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~ 176 (223)
...|..+++|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++..+ +
T Consensus 86 si~g~~f~de~~~~~h~~~G~lsma~-~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~---~ 161 (185)
T 4fru_A 86 SIYGERFPDENFKLKHYGPGWVSMAN-AGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRD---K 161 (185)
T ss_dssp BTTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS---C
T ss_pred cccCCccCccccccCcCCCeEEEEee-CCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCC---c
Confidence 1135567788778999 899999999 6799999999999999999999999999999999999999999998877 9
Q ss_pred CccceEEEeeeeecC
Q 027457 177 PTERITIHSSYYYDT 191 (223)
Q Consensus 177 P~~~i~I~~~~vl~~ 191 (223)
|.++|+|.+|+++..
T Consensus 162 P~~~v~I~~~g~l~~ 176 (185)
T 4fru_A 162 PLKDVTIADCGKIEV 176 (185)
T ss_dssp BSSCEEEEEEEEEEE
T ss_pred CCCCEEEEEceEEec
Confidence 999999999999843
No 29
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=8.7e-47 Score=315.55 Aligned_cols=163 Identities=28% Similarity=0.391 Sum_probs=140.4
Q ss_pred CCcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCCCCcchhhcccCcccc
Q 027457 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVV 105 (223)
Q Consensus 27 ~~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~g~~~~ 105 (223)
.+..|+|+|++|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.+ |.+.+.. ...|..++
T Consensus 20 ~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~si----~~~g~~f~ 95 (232)
T 3bkp_A 20 TRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADT----TFDGKPFD 95 (232)
T ss_dssp CBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSCCCCC----TTTTCCBC
T ss_pred CCCEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCCCCcc----ccCCCccC
Confidence 467999999999999999999999999999999999999999999999999999999985 2222100 00166788
Q ss_pred CC-cCCCCC-CccEEEEecCCCC-------------CCCcceEEEEeCCCCCCCCCCcEEEEEEcChHH--HHHHhcCCC
Q 027457 106 GE-FSDVKH-VRGILSMGRYSDP-------------NSAASSFSILLGDAPHLDGQYAVFGKVTKGDET--LRKLEGLPT 168 (223)
Q Consensus 106 ~e-~~~l~h-~~G~lsma~~~~~-------------~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~v--l~~I~~~~~ 168 (223)
+| .+.++| .+|+||||+.+.+ ++++|||||++++++|||++|+|||+|+ ||++ |++|+++++
T Consensus 96 dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t 174 (232)
T 3bkp_A 96 VETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLEV 174 (232)
T ss_dssp CCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSCB
T ss_pred CccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCCc
Confidence 88 468998 8999999995433 6999999999999999999999999999 7766 899999999
Q ss_pred CCCCCCCCCccceEEEeeeeecCCcchhH
Q 027457 169 RKEGIFVMPTERITIHSSYYYDTEMEICE 197 (223)
Q Consensus 169 ~~~~~~~~P~~~i~I~~~~vl~~~~~~~~ 197 (223)
+.++ +|.++|+|.+|+++.+|+++..
T Consensus 175 ~~~~---~P~~~i~I~~~~vl~dPf~d~~ 200 (232)
T 3bkp_A 175 GKED---RPMTPPFIKSVDVLWNPFEDLV 200 (232)
T ss_dssp CGGG---CBSSCCBEEEEEEEECCCTTCC
T ss_pred CCCC---CcCCCeEEEEEEEEcCChhhhh
Confidence 8777 9999999999999999887744
No 30
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=2.4e-46 Score=303.64 Aligned_cols=156 Identities=28% Similarity=0.375 Sum_probs=135.3
Q ss_pred CCCCCcEEEEEEe-----ceeEEEEEcCCCChhhHHHHHHhhc--CCc--------cCCceEEEEecCCEEEeecCCCCC
Q 027457 24 PQLGSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVR--LGC--------YNTNHFFRVDKGFVAQVADVVGGR 88 (223)
Q Consensus 24 ~~~~~~~v~~~t~-----~G~i~ieL~~~~aP~t~~nF~~L~~--~g~--------Y~g~~f~ri~~~~~iq~Gd~~~~~ 88 (223)
....+++|+|+++ .|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|+|||||+..+.
T Consensus 15 ~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~ 94 (186)
T 2poy_A 15 YFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGD 94 (186)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSS
T ss_pred ccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCC
Confidence 3456889999987 9999999999999999999999996 577 999999999999999999997654
Q ss_pred CCCCcchhhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCC
Q 027457 89 SAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLP 167 (223)
Q Consensus 89 ~~~~~~~~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~ 167 (223)
+.... ...|..+++|...++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++
T Consensus 95 G~gg~----si~g~~f~dE~~~l~h~~~G~lsMAn-~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~ 169 (186)
T 2poy_A 95 GTGGE----SIYGSKFRDENFVYTHDAPFLLSMAN-AGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCG 169 (186)
T ss_dssp SSCCC----CTTC-CBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTC
T ss_pred CCCCC----ccCCCcccCcccccccCCCcEEEEee-CCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCC
Confidence 43111 0135677888778999 799999999 78999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccceEEEeeee
Q 027457 168 TRKEGIFVMPTERITIHSSYY 188 (223)
Q Consensus 168 ~~~~~~~~~P~~~i~I~~~~v 188 (223)
+.. + +|.++|+|.+|++
T Consensus 170 t~~-~---~P~~~v~I~~cG~ 186 (186)
T 2poy_A 170 SQN-G---KPTKSVCITASGV 186 (186)
T ss_dssp CTT-S---CCSSCEEEEEEEC
T ss_pred CCC-C---CCCCCEEEEeCCC
Confidence 943 4 9999999999985
No 31
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=6.6e-46 Score=302.80 Aligned_cols=159 Identities=26% Similarity=0.366 Sum_probs=138.5
Q ss_pred CCCCCCcEEEEE-----EeceeEEEEEcCCCChhhHHHHHHhhc--CCc-cCCceEEEEecCCEEEeecCCCCCCCCCcc
Q 027457 23 DPQLGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNE 94 (223)
Q Consensus 23 ~~~~~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~ 94 (223)
.+.+.+++|+|+ |+.|+|+||||++.||+||+||++||+ .++ |+|+.||||+|+|++||||+..+.+....
T Consensus 22 ~~~~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~- 100 (193)
T 3k2c_A 22 MAKEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGR- 100 (193)
T ss_dssp CC--CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCC-
T ss_pred ccccCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCc-
Confidence 445678999999 569999999999999999999999998 667 99999999999999999997664443111
Q ss_pred hhhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCCCCC
Q 027457 95 VQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGI 173 (223)
Q Consensus 95 ~~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~ 173 (223)
...|..+.+|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++. +
T Consensus 101 ---si~g~~f~dE~~~l~h~~~G~lsmAn-~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~-g- 174 (193)
T 3k2c_A 101 ---SIYGEKFPDENFELKHTKEGILSMAN-CGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSES-G- 174 (193)
T ss_dssp ---CTTSSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-C-
T ss_pred ---ccCCCcccccccccccCCCcEEEEEe-CCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCC-C-
Confidence 1135667788778999 899999999 67999999999999999999999999999999999999999999974 4
Q ss_pred CCCCc--cceEEEeeeeec
Q 027457 174 FVMPT--ERITIHSSYYYD 190 (223)
Q Consensus 174 ~~~P~--~~i~I~~~~vl~ 190 (223)
+|. ++|+|.+|+++.
T Consensus 175 --~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 175 --QVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp --CCCTTCCEEEEEEEECC
T ss_pred --cCccCccEEEEEceEeC
Confidence 899 999999999985
No 32
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=5.5e-46 Score=309.55 Aligned_cols=157 Identities=24% Similarity=0.348 Sum_probs=139.6
Q ss_pred CCCCcEEEEEEe-----ceeEEEEEcCCCChhhHHHHHHhhcCC--------ccCCceEEEEecCCEEEeecCCCCCCCC
Q 027457 25 QLGSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVRLG--------CYNTNHFFRVDKGFVAQVADVVGGRSAP 91 (223)
Q Consensus 25 ~~~~~~v~~~t~-----~G~i~ieL~~~~aP~t~~nF~~L~~~g--------~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 91 (223)
.+.+++|+|+++ .|+|+||||++.||+||+||++||+++ +|+|+.||||+|+|+|||||+..+.+..
T Consensus 56 ~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~G 135 (229)
T 1z81_A 56 NPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSG 135 (229)
T ss_dssp STTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCC
T ss_pred CCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCC
Confidence 345889999976 899999999999999999999999877 7999999999999999999997654431
Q ss_pred CcchhhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEE--cChHHHHHHhcCCC
Q 027457 92 MNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT--KGDETLRKLEGLPT 168 (223)
Q Consensus 92 ~~~~~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv--~G~~vl~~I~~~~~ 168 (223)
.. ...|..+.+|...++| ++|+||||+ .+|++++|||||++.+++|||++|+|||+|+ +||+||++|+++++
T Consensus 136 g~----siyg~~f~dE~~~l~h~~~G~LsMAn-~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t 210 (229)
T 1z81_A 136 SL----SIYGEKFDDENFDIKHDKEGLLSMAN-SGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSV 210 (229)
T ss_dssp CC----BTTBSCCCCCCCCSCCCSTTEEEECC-SSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCB
T ss_pred CC----ccCCCcccccccccccCCCcEEEecc-CCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCC
Confidence 11 0135667888778999 899999999 6799999999999999999999999999999 99999999999999
Q ss_pred CCC-CCCCCCccceEEEeeeee
Q 027457 169 RKE-GIFVMPTERITIHSSYYY 189 (223)
Q Consensus 169 ~~~-~~~~~P~~~i~I~~~~vl 189 (223)
+.. + +|.++|+|.+|+++
T Consensus 211 ~~~~~---~P~~~V~I~~cG~l 229 (229)
T 1z81_A 211 TPYIY---KPKIPINVVECGEL 229 (229)
T ss_dssp CTTTC---CBSSCEEEEEEEEC
T ss_pred CCCCC---CCCCCeEEEeCeeC
Confidence 875 6 99999999999985
No 33
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=2.9e-46 Score=312.92 Aligned_cols=169 Identities=19% Similarity=0.203 Sum_probs=138.7
Q ss_pred CCCCCCCcEEEEE-----EeceeEEEEEcCCCChhhHHHHHHhhcC-----------------C--c-cCCceEEEEecC
Q 027457 22 EDPQLGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVRL-----------------G--C-YNTNHFFRVDKG 76 (223)
Q Consensus 22 ~~~~~~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~nF~~L~~~-----------------g--~-Y~g~~f~ri~~~ 76 (223)
......+++|+|+ |+.|+|+||||.+.||+||+||++||++ | + |+|+.||||+|+
T Consensus 8 ~p~~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~ 87 (234)
T 2ose_A 8 LPNSGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHN 87 (234)
T ss_dssp CCCCCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETT
T ss_pred cCcCCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECC
Confidence 3444568899999 8999999999999999999999999984 4 6 999999999999
Q ss_pred CEEEeecCCCCCCCCCcchhhcccCcc-ccCC--cCCCCC-CccEEEEecC---CCCCCCcceEEEEeCC------CCCC
Q 027457 77 FVAQVADVVGGRSAPMNEVQRVEAEKT-VVGE--FSDVKH-VRGILSMGRY---SDPNSAASSFSILLGD------APHL 143 (223)
Q Consensus 77 ~~iq~Gd~~~~~~~~~~~~~~~~~g~~-~~~e--~~~l~h-~~G~lsma~~---~~~~~~~sqFfItl~~------~~~l 143 (223)
|||||||+..+.|..... ..|.. ++.+ ...++| ++|+||||+. .+|++++|||||++++ .+||
T Consensus 88 FmiQgGd~~~g~G~Gg~s----iyg~~~~p~~f~~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~L 163 (234)
T 2ose_A 88 NYIVSGDIYNSNGSSAGT----VYCDEPIPPVFGDYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDEL 163 (234)
T ss_dssp TEEEECCCC----CCCCC----TTTTCCBCCCCCSCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGS
T ss_pred CEEEcCCccCCCCCCCcc----ccCCccCcccccCcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCccc
Confidence 999999965544321000 01222 1111 247899 8999999994 5799999999999999 8999
Q ss_pred CCCCcEEEEEEcChHHHHHHhcCCCCCCCCCCCCccceEEEeeeeecCCcchhH
Q 027457 144 DGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICE 197 (223)
Q Consensus 144 dg~~~vFG~Vv~G~~vl~~I~~~~~~~~~~~~~P~~~i~I~~~~vl~~~~~~~~ 197 (223)
|++|+|||+|++|||||++|++++++..+ +|.++|+|.+|+++.+++++.+
T Consensus 164 Dg~~tVFG~Vv~GmdVv~~I~~~~t~~~~---~P~~~V~I~~~~~l~~p~~~~~ 214 (234)
T 2ose_A 164 DRDQVVIGQVYGGLDVLDKINSMIKPYAG---RKYPTFSIGKCGAYLDSSQAQR 214 (234)
T ss_dssp CTTSEEEEEEEECHHHHHHHHHHTCCCTT---CCCCCEEEEEEEECCCHHHHCC
T ss_pred CCCeeEEEEEeCCHHHHHHHHhCCcCCCC---CccCCEEEEEEEEecCCccccc
Confidence 99999999999999999999999998877 9999999999999988765533
No 34
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=6.7e-45 Score=292.12 Aligned_cols=148 Identities=27% Similarity=0.388 Sum_probs=110.3
Q ss_pred EeceeEEEEEcCCCChhhHHHHHHhhc--CCc-cCCceEEEEecCCEEEeecCCCCCCCCCcchhhcccCccccCCcCCC
Q 027457 35 TNYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSDV 111 (223)
Q Consensus 35 t~~G~i~ieL~~~~aP~t~~nF~~L~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~g~~~~~e~~~l 111 (223)
|++|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|++||||+..+.+.... ...|..+++|...+
T Consensus 19 T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~----si~g~~f~dE~~~~ 94 (172)
T 2c3b_A 19 TKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGR----SIYGDKFADENFSR 94 (172)
T ss_dssp CEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC--------------------------CH
T ss_pred cccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCc----ccCCCcccCccccc
Confidence 667999999999999999999999998 678 99999999999999999995443332100 01356678887778
Q ss_pred CC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEc--ChHHHHHHhcCCCCCCCCCCCCccceEEEeeee
Q 027457 112 KH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK--GDETLRKLEGLPTRKEGIFVMPTERITIHSSYY 188 (223)
Q Consensus 112 ~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~--G~~vl~~I~~~~~~~~~~~~~P~~~i~I~~~~v 188 (223)
+| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++ ||+||++|++++++.++ .+|.++|+|.+|++
T Consensus 95 ~h~~~G~lsmA~-~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~--~~P~~~v~I~~cG~ 171 (172)
T 2c3b_A 95 KHDKKGILSMAN-AGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGS--VRSNTRPKIVNCGE 171 (172)
T ss_dssp HHHHTCEEEEC----------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSC--CCSSSCCEEEEEEE
T ss_pred ccCCCeEEEEee-CCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCC--ccCCCCeEEEeCee
Confidence 88 899999999 68999999999999999999999999999999 99999999999997642 28999999999998
Q ss_pred e
Q 027457 189 Y 189 (223)
Q Consensus 189 l 189 (223)
+
T Consensus 172 l 172 (172)
T 2c3b_A 172 L 172 (172)
T ss_dssp C
T ss_pred C
Confidence 5
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=4.8e-43 Score=311.63 Aligned_cols=155 Identities=26% Similarity=0.382 Sum_probs=139.5
Q ss_pred CcEEEEEEe-----ceeEEEEEcCCCChhhHHHHHHhhcC--------C---ccCCceEEEEecCCEEEeecCCCCCCCC
Q 027457 28 SARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVRL--------G---CYNTNHFFRVDKGFVAQVADVVGGRSAP 91 (223)
Q Consensus 28 ~~~v~~~t~-----~G~i~ieL~~~~aP~t~~nF~~L~~~--------g---~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 91 (223)
+++|+|+|+ .|+|+|+||++.||+||+||+.||++ | +|+|+.||||+|+|+|||||++.+.|..
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 899999998 89999999999999999999999987 6 6999999999999999999999655432
Q ss_pred CcchhhcccCccccCCcCCCCC-CccEEEEecCCCCCCCcceEEEEeCCCCCCCCCCcEEEEEEcChHHHHHHhcCCCCC
Q 027457 92 MNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRK 170 (223)
Q Consensus 92 ~~~~~~~~~g~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg~~~vFG~Vv~G~~vl~~I~~~~~~~ 170 (223)
.. ...|..+.+|...++| .+|+||||+ .+|+++|||||||+++++|||++|+|||+|++||+||++|+..+++.
T Consensus 95 ~~----~~~~~~~~~e~~~~~~~~~g~l~ma~-~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~ 169 (370)
T 1ihg_A 95 GE----SIYGEKFEDENFHYKHDKEGLLSMAN-AGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG 169 (370)
T ss_dssp CC----BTTBSCBCCCCCCBCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET
T ss_pred CC----CCCCCCcCCCcCCcCCCCCeEEEEee-CCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC
Confidence 11 1135677888778999 999999999 66999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCccceEEEeeeeecC
Q 027457 171 EGIFVMPTERITIHSSYYYDT 191 (223)
Q Consensus 171 ~~~~~~P~~~i~I~~~~vl~~ 191 (223)
+ +|..+|+|.+|+++..
T Consensus 170 -~---~P~~~v~I~~~g~l~~ 186 (370)
T 1ihg_A 170 -E---KPAKLCVIAECGELKE 186 (370)
T ss_dssp -T---EESSCEEEEEEEEECT
T ss_pred -C---ccceeEEEEEEEEecc
Confidence 5 8999999999999854
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=1e-37 Score=274.94 Aligned_cols=139 Identities=26% Similarity=0.268 Sum_probs=113.5
Q ss_pred CCCcEEEEEEe--------ceeEEEEEcCCCChhhHHHHHHhhcCCccCCceEEEEecCCEEEeecCCC-CCCC------
Q 027457 26 LGSARVVFQTN--------YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSA------ 90 (223)
Q Consensus 26 ~~~~~v~~~t~--------~G~i~ieL~~~~aP~t~~nF~~L~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~------ 90 (223)
.+++.|.|+|+ .|+|+|+||++.||+||+||++||+.|||+|+.|||| ++|++||||+++ +.|.
T Consensus 168 ~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~G~~~~~~g 246 (369)
T 3rfy_A 168 KGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAEGFIDPSTE 246 (369)
T ss_dssp CSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCSCCCSCCCC
T ss_pred CCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCCCccCcccC
Confidence 46889999998 8999999999999999999999999999999999999 999999999986 2221
Q ss_pred ---CCcchhh------cccCccccCC-----cCCCCC-CccEEEEecC-CCCCCCcceEEEEe-------CCCCCCCCCC
Q 027457 91 ---PMNEVQR------VEAEKTVVGE-----FSDVKH-VRGILSMGRY-SDPNSAASSFSILL-------GDAPHLDGQY 147 (223)
Q Consensus 91 ---~~~~~~~------~~~g~~~~~e-----~~~l~h-~~G~lsma~~-~~~~~~~sqFfItl-------~~~~~ldg~~ 147 (223)
.++.+.. ...+..+.+| .+.++| .+|+|||||. .+||+++|||||++ ++.+|||++|
T Consensus 247 ~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgky 326 (369)
T 3rfy_A 247 KTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRY 326 (369)
T ss_dssp CCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCE
T ss_pred cCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCe
Confidence 1111110 0011222222 236777 9999999995 38999999999999 4789999999
Q ss_pred cEEEEEEcChHHHHHHhc
Q 027457 148 AVFGKVTKGDETLRKLEG 165 (223)
Q Consensus 148 ~vFG~Vv~G~~vl~~I~~ 165 (223)
+|||+|++||+||++|++
T Consensus 327 tVFG~VveGmdVVdkI~~ 344 (369)
T 3rfy_A 327 AVFGYVTDNEDFLADLKV 344 (369)
T ss_dssp EEEEEEEESTTGGGGCCT
T ss_pred eEEEEEecCHHHHHHHhC
Confidence 999999999999999987
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=93.68 E-value=0.22 Score=38.25 Aligned_cols=104 Identities=18% Similarity=0.252 Sum_probs=63.1
Q ss_pred CcEEEEEEeceeEEEEEcCCCChhhHHHHHHhhc--C--CccCCceEEEEecCCEEEeecCCCCCCCCCcchhhcccCcc
Q 027457 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR--L--GCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103 (223)
Q Consensus 28 ~~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~~--~--g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~g~~ 103 (223)
.-++.|+..-..++++|+.+.||+||+.|+++.= . ..|.+-.++ -.|-. . .
T Consensus 29 ~~~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~LPl~~~~~~~g~E~y~-~lp~~------------l------------~ 83 (153)
T 2nnz_A 29 EMRLRIRFESAECEVELYEEWAPETVRAIADALPIKSTANRWGDEIYF-TTQVA------------V------------E 83 (153)
T ss_dssp CCCEEEEETTEEEEECCCTTSCHHHHHHHHHTCSEEEEEEEETTEEEE-CCSCC------------C------------C
T ss_pred CeEEEEEECCEEEEEEEcCCCCHHHHHHHHHhCCcEEEHHhhCCcEEE-ECCCC------------C------------C
Confidence 4568888888899999999999999999999851 1 123221111 11100 0 0
Q ss_pred ccCCcCCCCCCccEEEEecCCCCCCCcceEEEEeCCCCCCCC------CCcEEEEEEcChHHHHHH
Q 027457 104 VVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG------QYAVFGKVTKGDETLRKL 163 (223)
Q Consensus 104 ~~~e~~~l~h~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg------~~~vFG~Vv~G~~vl~~I 163 (223)
. +|.....-..|-|++-. .+. .+-|-+++.+...+ .-.+||+|++|++.|.++
T Consensus 84 ~-~en~~~~~~~GDI~Yy~-pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~ 142 (153)
T 2nnz_A 84 K-EENSKDVVELGDVAYWI-PGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGV 142 (153)
T ss_dssp C-SSCCBCCCCTTEEEEET-TTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGC
T ss_pred C-CCCCcccCCCCeEEEeC-CCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhC
Confidence 0 01122223678887765 221 37777777643322 247899999998877655
No 38
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=93.02 E-value=0.38 Score=37.89 Aligned_cols=32 Identities=13% Similarity=0.160 Sum_probs=25.1
Q ss_pred cEEEEEEecee--EEEEEcCCCChhhHHHHHHhh
Q 027457 29 ARVVFQTNYGD--IEFGFYPSVAPQTVDHIFKLV 60 (223)
Q Consensus 29 ~~v~~~t~~G~--i~ieL~~~~aP~t~~nF~~L~ 60 (223)
.++.++...+. ++.+|..+.||+||+.|.++.
T Consensus 22 r~i~itl~~~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 22 RYINITLEKRGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp CEEEEEETTTTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred eEEEEEEecCCeEEEEEEccccChHHHHHHHHhC
Confidence 35566655444 688999999999999999976
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=79.56 E-value=15 Score=27.30 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=60.3
Q ss_pred cEEEEEEeceeEEEEEcCCCChhhHHHHHHhh----cCCccCCceEEEEecCCEEEeecCCCCCCCCCcchhhcccCccc
Q 027457 29 ARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV----RLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTV 104 (223)
Q Consensus 29 ~~v~~~t~~G~i~ieL~~~~aP~t~~nF~~L~----~~g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~g~~~ 104 (223)
-+|.+-.....++.+|+.+ |.|++.|.+.. +-..|. ..++-..|... ..
T Consensus 13 ~~~~~~~~~~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~~~g-~E~y~~~p~~l-~~----------------------- 65 (136)
T 1zx8_A 13 MRVELLFESGKCVIDLNEE--YEVVKLLKEKIPFESVVNTWG-EEIYFSTPVNV-QK----------------------- 65 (136)
T ss_dssp EEEEEECSSCEEEEEEETT--SHHHHHHHHHCSEEEECEESS-SEEEEECSCCC-CC-----------------------
T ss_pred eEEEEeeCCcEEEEEEcCC--HHHHHHHHHHCCcEEEHHHhC-CcEEEECCccC-CC-----------------------
Confidence 4566667778899999765 88999999886 122343 33332222210 00
Q ss_pred cCCcCCCCCCccEEEEecCCCCCCCcceEEEEeCCCCCCCC------CCcEEEEEEcChHHHHHH
Q 027457 105 VGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG------QYAVFGKVTKGDETLRKL 163 (223)
Q Consensus 105 ~~e~~~l~h~~G~lsma~~~~~~~~~sqFfItl~~~~~ldg------~~~vFG~Vv~G~~vl~~I 163 (223)
+|........|-|+.-..+ . -|-|-+++.|...+ .-.+||+|.+|++.+..+
T Consensus 66 -~e~~~~~~~~GDIaYw~pg-g-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 66 -MENPREVVEIGDVGYWPPG-K-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp -CSSEESSBCTTEEEEEGGG-T-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGC
T ss_pred -CCCCCccCCCCcEEEeCCC-C-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhC
Confidence 0111222367777776522 1 37777777754433 357999999998876554
No 40
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=40.86 E-value=10 Score=27.77 Aligned_cols=14 Identities=7% Similarity=0.119 Sum_probs=7.7
Q ss_pred EEEEEEeceeEEEE
Q 027457 30 RVVFQTNYGDIEFG 43 (223)
Q Consensus 30 ~v~~~t~~G~i~ie 43 (223)
.+.++...+.+.+.
T Consensus 30 ~~~~~~~~~~V~F~ 43 (130)
T 2a3m_A 30 GLKMENTKMPVIFN 43 (130)
T ss_dssp CEEECSSSSCEEEC
T ss_pred cccccCCCCCcccC
Confidence 34455556666654
No 41
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=28.51 E-value=23 Score=26.70 Aligned_cols=16 Identities=13% Similarity=0.301 Sum_probs=11.5
Q ss_pred EEEEEecee----EEEEEcC
Q 027457 31 VVFQTNYGD----IEFGFYP 46 (223)
Q Consensus 31 v~~~t~~G~----i~ieL~~ 46 (223)
=+++|..|+ |.|+|+.
T Consensus 35 HVLDt~~G~PA~gv~V~L~~ 54 (147)
T 4ank_A 35 KVLDAVRGSPAINVAVHVFR 54 (147)
T ss_dssp EEEETTTTEECCSCEEEEEE
T ss_pred EEEeCCCCcCCCCCEEEEEE
Confidence 346777666 8888874
No 42
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=27.94 E-value=12 Score=19.05 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=13.0
Q ss_pred HHHHHHhhcCCccCCc
Q 027457 53 VDHIFKLVRLGCYNTN 68 (223)
Q Consensus 53 ~~nF~~L~~~g~Y~g~ 68 (223)
..||-.-.+.|||+|-
T Consensus 3 wknfwsslrkgfydge 18 (26)
T 2khf_A 3 WKNFWSSLRKGFYDGE 18 (26)
T ss_dssp HHHHHHHHHHHHTTTH
T ss_pred HHHHHHHHHhhcccch
Confidence 4688888889999874
No 43
>4dz1_A DALS D-alanine transporter; D-alanine binding, periplasmic, transport protein; 1.90A {Salmonella enterica} PDB: 3r39_A 4f3s_A
Probab=24.28 E-value=38 Score=26.38 Aligned_cols=12 Identities=17% Similarity=0.504 Sum_probs=5.2
Q ss_pred eEEEEEcCCCCh
Q 027457 39 DIEFGFYPSVAP 50 (223)
Q Consensus 39 ~i~ieL~~~~aP 50 (223)
.|+|....+..|
T Consensus 30 ~l~v~~~~~~~P 41 (259)
T 4dz1_A 30 TLNVAVSPASPP 41 (259)
T ss_dssp EEEEEECCCBTT
T ss_pred eEEEEECCCCCC
Confidence 344444444444
No 44
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=23.22 E-value=50 Score=17.09 Aligned_cols=14 Identities=36% Similarity=0.278 Sum_probs=10.2
Q ss_pred CCCcceEEEEeCCC
Q 027457 127 NSAASSFSILLGDA 140 (223)
Q Consensus 127 ~~~~sqFfItl~~~ 140 (223)
....|..||||.+.
T Consensus 7 KR~aSSvFITLapp 20 (26)
T 2k9u_B 7 KRVASSVFITLAPP 20 (26)
T ss_dssp SSCEEEEEEEECCS
T ss_pred hheeeeEEEEecCc
Confidence 34567799999764
No 45
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=20.15 E-value=48 Score=26.56 Aligned_cols=22 Identities=5% Similarity=-0.008 Sum_probs=10.8
Q ss_pred hHHHHHHHHHhhhhhHHHHHHh
Q 027457 196 CEKERSVLKRRLTASVIEIERQ 217 (223)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~ 217 (223)
...+..+++.++++..++.+.+
T Consensus 269 ~~~~~~~~~~~~~~~l~~~~~~ 290 (294)
T 3m8t_A 269 LVTYATSLSEDFDKQLAKQTAA 290 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhh
Confidence 3445555555555555444333
Done!