BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027460
(223 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 134/178 (75%), Gaps = 4/178 (2%)
Query: 19 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGF 78
G SG TA VA++ K L VANAGDSRCV+ R G+AL +S DHKP+ VE RI KAGG
Sbjct: 127 GKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGR 186
Query: 79 IQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
+ + GRVNG LNL+RAIGD +K+NKSLPAE+Q+++A PDI I + +DEF+V+ACDGI
Sbjct: 187 VTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGI 246
Query: 138 WDCLSSQELVDFVRDQLTNE-TKLSVICEKVFDRCLAPSAGGE--GCDNMTMILVQFK 192
W+ ++S+++V FV++++ KLS ICE++FD CLAP G+ GCDNMT I+VQFK
Sbjct: 247 WNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 140 bits (352), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 112/189 (59%), Gaps = 6/189 (3%)
Query: 18 HGP-TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAG 76
HG SGSTA +I + N GDSR +L R + ++DHKP +EK+RI AG
Sbjct: 120 HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAG 179
Query: 77 GFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELC-DDDEFLVIACD 135
G + + RVNGSL ++RA+GD ++K +Q+V+ P++ IE +DD+F+++ACD
Sbjct: 180 GSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACD 239
Query: 136 GIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNAS 195
GIWD + ++EL DFVR +L L +C +V D CL + DNM++IL+ F NA
Sbjct: 240 GIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR----DNMSVILICFPNAP 295
Query: 196 NNGPSAAEQ 204
P A ++
Sbjct: 296 KVSPEAVKK 304
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 139 bits (351), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 5/184 (2%)
Query: 22 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV 81
SGSTA +I + N GDSR +L R + ++DHKP +EK+RI AGG + +
Sbjct: 125 SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI 184
Query: 82 GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELC-DDDEFLVIACDGIWDC 140
RVNGSL ++RA+GD ++K +Q+V+ P++ IE +DD+F+++ACDGIWD
Sbjct: 185 QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDV 244
Query: 141 LSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPS 200
+ ++EL DFVR +L L +C +V D CL + DNM++IL+ F NA P
Sbjct: 245 MGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR----DNMSVILICFPNAPKVSPE 300
Query: 201 AAEQ 204
A ++
Sbjct: 301 AVKK 304
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 22 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV 81
SGSTA +I K + N GDSR VL R GQ ++DHKP EK+RI AGG + +
Sbjct: 132 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 191
Query: 82 GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCL 141
RVNGSL ++RA+GD ++K +Q+V+ P++ I ++DEF+++A DGIWD +
Sbjct: 192 QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILAXDGIWDVM 251
Query: 142 SSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKN 193
S++EL ++V+ +L L +C V D CL + DNM+++LV F N
Sbjct: 252 SNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSIVLVCFSN 299
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 85/137 (62%), Gaps = 15/137 (10%)
Query: 21 TSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI 79
TSG+TA VA++RD +LVVA+ GDSR +L RKG+ + L+ DH P+ + EK+RI K GGF+
Sbjct: 214 TSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFV 273
Query: 80 QVG-----RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIA 133
VNG L + R+IGD++ K + V A P+ I+L DD FLV+
Sbjct: 274 AWNSLGQPHVNGRLAMTRSIGDLDLKTSG--------VIAEPETKRIKLHHADDSFLVLT 325
Query: 134 CDGIWDCLSSQELVDFV 150
DGI ++SQE+ DFV
Sbjct: 326 TDGINFMVNSQEICDFV 342
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 85/137 (62%), Gaps = 15/137 (10%)
Query: 21 TSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI 79
TSG+TA VA++RD +LVVA+ GDSR +L RKG+ + L+ DH P+ + EK+RI K GGF+
Sbjct: 100 TSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFV 159
Query: 80 QVG-----RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIA 133
VNG L + R+IGD++ K + V A P+ I+L DD FLV+
Sbjct: 160 AWNSLGQPHVNGRLAMTRSIGDLDLKTSG--------VIAEPETKRIKLHHADDSFLVLT 211
Query: 134 CDGIWDCLSSQELVDFV 150
DGI ++SQE+ DFV
Sbjct: 212 TDGINFMVNSQEICDFV 228
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 12/137 (8%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI- 79
T GSTA VA++ +VV+N GDSR VL R +A+ LS DHKPD E E RI AGG +
Sbjct: 153 TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVI 212
Query: 80 --QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
Q RV G L ++R+IGD K V P+++ + +DE L++A DG+
Sbjct: 213 QWQGARVFGVLAMSRSIGDRYL---------KPYVIPEPEVTFMPRSREDECLILASDGL 263
Query: 138 WDCLSSQELVDFVRDQL 154
WD +++QE+ + R ++
Sbjct: 264 WDVMNNQEVCEIARRRI 280
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 12/137 (8%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI- 79
T GSTA VA++ +VV+N GDSR VL R +A+ LS DHKPD E E RI AGG +
Sbjct: 150 TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVI 209
Query: 80 --QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
Q RV G L ++R+IGD K V P+++ + +DE L++A DG+
Sbjct: 210 QWQGARVFGVLAMSRSIGDRYL---------KPYVIPEPEVTFMPRSREDECLILASDGL 260
Query: 138 WDCLSSQELVDFVRDQL 154
WD +++QE+ + R ++
Sbjct: 261 WDVMNNQEVCEIARRRI 277
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 12/137 (8%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI- 79
T GSTA VA++ +VV+N GDSR VL R +A+ LS DHKPD E E RI AGG +
Sbjct: 163 TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVI 222
Query: 80 --QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
Q RV G L ++R+IGD K V P+++ + +DE L++A DG+
Sbjct: 223 QWQGARVFGVLAMSRSIGDRYL---------KPYVIPEPEVTFMPRSREDECLILASDGL 273
Query: 138 WDCLSSQELVDFVRDQL 154
WD +++QE+ + R ++
Sbjct: 274 WDVMNNQEVCEIARRRI 290
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 12/137 (8%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI- 79
T GSTA VA++ +VV+N GDSR VL R +A+ LS DHKPD E E RI AGG +
Sbjct: 156 TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVI 215
Query: 80 --QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
Q RV G L ++R+IGD K V P+++ + +DE L++A DG+
Sbjct: 216 QWQGARVFGVLAMSRSIGDRYL---------KPYVIPEPEVTFMPRSREDECLILASDGL 266
Query: 138 WDCLSSQELVDFVRDQL 154
WD +++QE+ + R ++
Sbjct: 267 WDVMNNQEVCEIARRRI 283
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 12/137 (8%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI- 79
T GSTA VA++ +VV+N GDSR VL R +A+ LS DHKPD E E RI AGG +
Sbjct: 154 TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVI 213
Query: 80 --QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
Q RV G L ++R+IGD K V P+++ + +DE L++A DG+
Sbjct: 214 QWQGARVFGVLAMSRSIGDRYL---------KPYVIPEPEVTFMPRSREDECLILASDGL 264
Query: 138 WDCLSSQELVDFVRDQL 154
WD +++QE+ + R ++
Sbjct: 265 WDVMNNQEVCEIARRRI 281
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 12/137 (8%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI- 79
T GSTA VA++ +VV+N GDSR VL R +A+ LS DHKPD E E RI AGG +
Sbjct: 139 TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVI 198
Query: 80 --QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
Q RV G L ++R+IGD K V P+++ + +DE L++A DG+
Sbjct: 199 QWQGARVFGVLAMSRSIGDRYL---------KPYVIPEPEVTFMPRSREDECLILASDGL 249
Query: 138 WDCLSSQELVDFVRDQL 154
WD +++QE+ + R ++
Sbjct: 250 WDVMNNQEVCEIARRRI 266
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 18 HGP-TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAG 76
H P T GST+ VA++ + VAN GDSR VL R L LS DHKPD + E RI AG
Sbjct: 126 HAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAG 185
Query: 77 GFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIA 133
G + RV G L ++R+IGD K + V +P+++++ +D+ L++A
Sbjct: 186 GKVIRWNGARVFGVLAMSRSIGDRYLKPS---------VIPDPEVTSVRRVKEDDCLILA 236
Query: 134 CDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 191
DG+WD ++++E+ D R ++ K + + + L GEG D M ++
Sbjct: 237 SDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEAL---LPAEKRGEGKDPAAMSAAEY 291
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG-FI 79
T GST+ VA++ + VAN GDSR VL R AL LS DHKPD E E RI AGG I
Sbjct: 121 TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVI 180
Query: 80 QV--GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
Q RV G L ++R+IGD K + + +P+++ ++ +D+ L++A DG+
Sbjct: 181 QWNGARVFGVLAMSRSIGDRYLKPS---------IIPDPEVTAVKRVKEDDCLILASDGV 231
Query: 138 WDCLSSQELVDFVRDQL 154
WD ++ +E + R ++
Sbjct: 232 WDVMTDEEACEMARKRI 248
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG-FI 79
T GST+ VA++ + VAN GDSR VL R AL LS DHKPD E E RI AGG I
Sbjct: 136 TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVI 195
Query: 80 QV--GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
Q RV G L ++R+IGD K + + +P+++ ++ +D+ L++A DG+
Sbjct: 196 QWNGARVFGVLAMSRSIGDRYLKPS---------IIPDPEVTAVKRVKEDDCLILASDGV 246
Query: 138 WDCLSSQELVDFVRDQL 154
WD ++ +E + R ++
Sbjct: 247 WDVMTDEEACEMARKRI 263
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG-FI 79
T GST+ VA++ + VAN GDSR VL R AL LS DHKPD E E RI AGG I
Sbjct: 124 TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVI 183
Query: 80 QV--GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGI 137
Q RV G L ++R+IGD K + + +P+++ ++ +D+ L++A DG+
Sbjct: 184 QWNGARVFGVLAMSRSIGDRYLKPS---------IIPDPEVTAVKRVKEDDCLILASDGV 234
Query: 138 WDCLSSQELVDFVRDQL 154
WD ++ +E + R ++
Sbjct: 235 WDVMTDEEACEMARKRI 251
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 36 LVVA-NAGDSRCVLSRK-GQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNL 90
LV A N GDSR L G LSKDHKP+ E RI KAGG ++ V RV+G L L
Sbjct: 174 LVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLAL 233
Query: 91 ARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFV 150
+RA GD +FK N +LP E+Q V A PD+ + L++ACDG+++ S +V
Sbjct: 234 SRAFGDSDFKXNPNLPPEEQKVIAVPDVRQF-YALSSDLLLLACDGVYE--PSGXDWAYV 290
Query: 151 RDQLTNETKLSV-ICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQPPSDQ 209
RD E + S E+V R + DN+++ LV F N P+A + S Q
Sbjct: 291 RDLTVAEXQRSKGDLEEVAARVXDYAYDXNSQDNISVXLVAFHNQEVEHPTAVYKVVSGQ 350
Query: 210 QSKLASSSAGTESN 223
K+ AG + N
Sbjct: 351 VDKVEWDVAGKKGN 364
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 39/171 (22%)
Query: 22 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRIL--- 73
SG+TACVA + L VAN GDSR +L + + A+ LS DH E E +R+
Sbjct: 199 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEH 258
Query: 74 ---KAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIV------------------ 112
+A ++ R+ G L RA GDV+FK S+ +K+++
Sbjct: 259 PKNEAKSVVKQDRLLGLLMPFRAFGDVKFKW--SIDLQKRVIESGPDQLNDNEYTKFIPP 316
Query: 113 --------TANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLT 155
TA P+++ L D+FLV+A DG+W+ + Q++V V + LT
Sbjct: 317 NYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLT 367
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 79/169 (46%), Gaps = 35/169 (20%)
Query: 22 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRIL--- 73
SG+TACVA + L VAN GDSR +L + + A+ LS DH E E R+
Sbjct: 199 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEH 258
Query: 74 ---KAGGFIQVGRVNGSLNLARAIGDVEFK---------------------LNKSLPAEK 109
+A ++ R+ G L RA GDV+FK K +P
Sbjct: 259 PKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNY 318
Query: 110 Q---IVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLT 155
+TA P+++ L D+FLV+A DG+W+ + Q++V V + LT
Sbjct: 319 HTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLT 367
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 23/173 (13%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKG----QALNLSKDHKPDLEVEKDRI---- 72
+ G+ A VA++ + +L VAN G +R +L + Q L+ DH + E E R+
Sbjct: 163 SGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG 222
Query: 73 LKAGGFIQVGRVNGSLNLARAIGDVEFKLNKS-----LPAEKQIVTANPDISTIELCDD- 126
L AG QVG + G + R IGD + K + A+ + + A P+I + D
Sbjct: 223 LDAGKIKQVGIICGQES-TRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGV 281
Query: 127 DEFLVIACDGIWDCL--------SSQELVDFVRDQLTNETKLSVICEKVFDRC 171
FLV+ +G++ L ++QE+ + + +T L + + V DR
Sbjct: 282 TGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRV 334
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 34/204 (16%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKG----QALNLSKDHKPDLEVEKDRI---- 72
+ G+ A VA++ + +L VAN G +R +L + Q L+ DH + E E R+
Sbjct: 165 SGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG 224
Query: 73 LKAGGFIQVGRVNGSLNLARAIGDVEFKLNKS-----LPAEKQIVTANPDISTIELCDD- 126
L AG QVG + G + R IGD + K + A+ + + A P+I + D
Sbjct: 225 LDAGKIKQVGIICGQES-TRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGV 283
Query: 127 DEFLVIACDGIWDCL--------SSQELVDFVRDQLTNETKLSVICEKVFDRCL-----A 173
FLV+ +G++ L ++QE+ + + +T L + + V DR
Sbjct: 284 TGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDT 343
Query: 174 PSAGGEGC------DNMTMILVQF 191
++GGE ++MT+++ F
Sbjct: 344 FASGGERARFCPRHEDMTLLVRNF 367
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 34/204 (16%)
Query: 21 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKG----QALNLSKDHKPDLEVEKDRI---- 72
+ G+ A VA++ + +L VAN G +R +L + Q L+ DH + E E R+
Sbjct: 146 SGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG 205
Query: 73 LKAGGFIQVGRVNGSLNLARAIGDVEFKLNKS-----LPAEKQIVTANPDISTIELCDD- 126
L AG QVG + G + R IGD + K + A+ + + A P+I + D
Sbjct: 206 LDAGKIKQVGIICGQES-TRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGV 264
Query: 127 DEFLVIACDGIWDCL--------SSQELVDFVRDQLTNETKLSVICEKVFDRCL-----A 173
FLV+ +G++ L ++QE+ + + +T L + + V DR
Sbjct: 265 TGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDT 324
Query: 174 PSAGGEGC------DNMTMILVQF 191
++GGE ++MT+++ F
Sbjct: 325 FASGGERARFCPRHEDMTLLVRNF 348
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 22 SGSTACVAIIRDKQLVVANAGDSRCVLS-RKGQALN---LSKDHKPDLEVEKDRILKAGG 77
+ ST+ A++ + V + GDSR LN L+ DHKPD EK RI + GG
Sbjct: 136 ASSTSVTAVLAKGFVAVGHLGDSRIAXGVETPNGLNCEFLTVDHKPDXPHEKLRIXRNGG 195
Query: 78 FIQVGRVNGSLNLARAIGDVEFKLNK-SLPAEKQIVTA-------------NPDISTIEL 123
++ + + R GD F+ ++ P + Q A PD+ + +
Sbjct: 196 SVEYLHNHNNKPFIRG-GDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRV 254
Query: 124 CDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAP-SAGGEGCD 182
++A DG+WD S+ + V+ + Q E + + + + LA + + D
Sbjct: 255 TPQHRVXILATDGLWDVXSAAQAVE-IAXQARQEGRNP--AQALVEXTLAEQQSRNQSAD 311
Query: 183 NMTMILVQFK 192
N+T V FK
Sbjct: 312 NITAXTVFFK 321
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 38 VANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLA------ 91
VA+ G+SRCVL A++LS H E+ R+ AGG VNG L L
Sbjct: 170 VASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTT--VNGELLLGGVVPXT 227
Query: 92 RAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQ 144
RA G +FK ++ +V+A PD++T D+ +V G + S
Sbjct: 228 RAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGDD-IVAGTAGAFAHFRSH 279
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|B Chain B, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|C Chain C, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|D Chain D, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
Length = 250
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 12 GPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDR 71
G D+ G + + VAI+ D ++ A+ GDSR + R+G+ L+ DH +
Sbjct: 94 GQSDDYKGMGT-TIEAVAIVGDN-IIFAHVGDSRIGIVRQGEYHLLTSDHSL-----VNE 146
Query: 72 ILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLV 131
++KAG Q+ + + + I + + ++ P E PD+ + L ++ ++LV
Sbjct: 147 LVKAG---QLTEEEAASHPQKNI--ITQSIGQANPVE-------PDLG-VHLLEEGDYLV 193
Query: 132 IACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 191
+ DG+ + LS+ ++ LT E L + + LA G G DN+T+ LV
Sbjct: 194 VNSDGLTNMLSNADIATV----LTQEKTLDDKNQDLI--TLANHRG--GLDNITVALVYV 245
Query: 192 K 192
+
Sbjct: 246 E 246
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 24/170 (14%)
Query: 23 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGG 77
GS+A +A+I L + N G+ R +L + + LS DH E R+ + G
Sbjct: 154 GSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGL 213
Query: 78 FIQVGRVNG-SLNLARAIGDVEFKL-----NKSLPAEKQIVTANPDI-STIELCDDDEFL 130
Q G L R IG+ K N A + V P+I I++ FL
Sbjct: 214 MAQ--NFEGVPLYSTRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEIVGGIQITPACRFL 271
Query: 131 VIACDGIWDCLS----------SQELVDFVRDQLTNETKLSVICEKVFDR 170
V+ G+ L ++ELV + ++ N++ L + + V R
Sbjct: 272 VLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHR 321
>pdb|3HUO|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 S70g In
Complex With Benzylpenicillin
pdb|3HUO|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 S70g In
Complex With Benzylpenicillin
pdb|3HVF|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 S70g In
Complex With Hydrolyzed Benzylpenicillin
pdb|3HVF|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 S70g In
Complex With Hydrolyzed Benzylpenicillin
pdb|3HLW|A Chain A, Ctx-M-9 S70g In Complex With Cefotaxime
pdb|3HLW|B Chain B, Ctx-M-9 S70g In Complex With Cefotaxime
pdb|3HRE|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 S70g
pdb|3HRE|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 S70g
pdb|3Q07|A Chain A, Ctx-M-9 S70g In Complex With Piperacillin
pdb|3Q07|B Chain B, Ctx-M-9 S70g In Complex With Piperacillin
pdb|3Q1F|A Chain A, Ctx-M-9 S70g In Complex With Hydrolyzed Piperacillin
pdb|3Q1F|B Chain B, Ctx-M-9 S70g In Complex With Hydrolyzed Piperacillin
Length = 263
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 80 QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDIST 120
Q+G G ARAIGD F+L+++ P + +P +T
Sbjct: 116 QLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTT 156
>pdb|2P74|A Chain A, Ctx-M-9 Class A Beta-Lactamase Apo Crystal Structure At
0.88 Angstrom Resolution
pdb|2P74|B Chain B, Ctx-M-9 Class A Beta-Lactamase Apo Crystal Structure At
0.88 Angstrom Resolution
pdb|3G2Y|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 1
(Gf4)
pdb|3G2Y|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 1
(Gf4)
pdb|4DDS|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 11
pdb|4DDS|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 11
pdb|4DDY|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 10
pdb|4DDY|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 10
pdb|4DE0|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 16
pdb|4DE0|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 16
pdb|4DE1|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 18
pdb|4DE1|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 18
pdb|4DE2|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 12
pdb|4DE2|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 12
pdb|4DE3|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 4
pdb|4DE3|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 4
Length = 263
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 80 QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDIST 120
Q+G G ARAIGD F+L+++ P + +P +T
Sbjct: 116 QLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTT 156
>pdb|1YLJ|A Chain A, Atomic Resolution Structure Of Ctx-M-9 Beta-Lactamase
pdb|1YLY|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
Complexed With Ceftazidime-Like Boronic Acid
pdb|1YLY|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
Complexed With Ceftazidime-Like Boronic Acid
pdb|1YM1|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
Complexed With A Boronic Acid Inhibitor (Sm2)
pdb|1YM1|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
Complexed With A Boronic Acid Inhibitor (Sm2)
pdb|1YMS|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
Complexed With Nafcinin-Like Boronic Acid Inhibitor
pdb|1YMS|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
Complexed With Nafcinin-Like Boronic Acid Inhibitor
pdb|1YMX|A Chain A, X-ray Crystallographic Structure Of Ctx-m-9 Beta-lactamase
Covalently Linked To Cefoxitin
pdb|1YMX|B Chain B, X-ray Crystallographic Structure Of Ctx-m-9 Beta-lactamase
Covalently Linked To Cefoxitin
pdb|3G2Z|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 2
(Gz2)
pdb|3G2Z|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 2
(Gz2)
pdb|3G30|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 3
(G30)
pdb|3G31|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 4
(Gf1)
pdb|3G31|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 4
(Gf1)
pdb|3G32|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 6
(3g3)
pdb|3G32|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 6
(3g3)
pdb|3G34|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 11
(1ce)
pdb|3G34|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 11
(1ce)
pdb|3G35|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 12
(F13)
pdb|3G35|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 12
(F13)
Length = 263
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 80 QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDIST 120
Q+G G ARAIGD F+L+++ P + +P +T
Sbjct: 116 QLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTT 156
>pdb|1YLW|A Chain A, X-ray Structure Of Ctx-m-16 Beta-lactamase
Length = 263
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 80 QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDIST 120
Q+G G ARAIGD F+L+++ P + +P +T
Sbjct: 116 QLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTT 156
>pdb|1YLT|A Chain A, Atomic Resolution Structure Of Ctx-M-14 Beta-Lactamase
pdb|1YLZ|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-14
Beta-Lactamase Complexed With Ceftazidime-Like Boronic
Acid
pdb|1YLZ|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-14
Beta-Lactamase Complexed With Ceftazidime-Like Boronic
Acid
Length = 263
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 80 QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDIST 120
Q+G G ARAIGD F+L+++ P + +P +T
Sbjct: 116 QLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTT 156
>pdb|1YLP|A Chain A, Atomic Resolution Structure Of Ctx-M-27 Beta-Lactamase
Length = 263
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 80 QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDIST 120
Q+G G ARAIGD F+L+++ P + +P +T
Sbjct: 116 QLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTT 156
>pdb|3RNR|A Chain A, Crystal Structure Of Stage Ii Sporulation E Family Protein
From Thermanaerovibrio Acidaminovorans
pdb|3RNR|B Chain B, Crystal Structure Of Stage Ii Sporulation E Family Protein
From Thermanaerovibrio Acidaminovorans
Length = 211
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 22 SGSTACVAII--RDKQLVVANAGDSRCVLSRKGQALNLSKDH 61
+G+T VA + RD L A+ GD R L + G+ LS DH
Sbjct: 70 TGATXAVAAVNLRDGTLEWASVGDCRVYLFKGGRLSRLSLDH 111
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,386,230
Number of Sequences: 62578
Number of extensions: 240328
Number of successful extensions: 1034
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 974
Number of HSP's gapped (non-prelim): 37
length of query: 223
length of database: 14,973,337
effective HSP length: 95
effective length of query: 128
effective length of database: 9,028,427
effective search space: 1155638656
effective search space used: 1155638656
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)