Query 027463
Match_columns 223
No_of_seqs 149 out of 1336
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 17:17:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027463.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027463hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i7u_A AP4A hydrolase; nudix p 99.9 4.3E-24 1.5E-28 164.4 16.2 128 22-171 4-131 (134)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.9 3.2E-22 1.1E-26 156.7 15.5 141 23-173 4-146 (155)
3 1vcd_A NDX1; nudix protein, di 99.9 6.6E-21 2.3E-25 143.2 16.1 123 22-169 2-124 (126)
4 1ktg_A Diadenosine tetraphosph 99.9 7.2E-21 2.5E-25 145.2 16.4 131 21-170 2-136 (138)
5 2pbt_A AP4A hydrolase; nudix p 99.9 1E-20 3.4E-25 143.5 16.2 128 22-171 4-131 (134)
6 3son_A Hypothetical nudix hydr 99.9 2.2E-20 7.4E-25 144.7 17.2 137 23-172 6-144 (149)
7 3gg6_A Nudix motif 18, nucleos 99.8 2.5E-20 8.6E-25 145.4 13.5 131 16-172 14-150 (156)
8 3i9x_A MUTT/nudix family prote 99.8 8.8E-21 3E-25 153.1 10.0 137 19-173 24-176 (187)
9 3fcm_A Hydrolase, nudix family 99.8 7.6E-20 2.6E-24 148.8 14.8 142 20-174 43-189 (197)
10 3grn_A MUTT related protein; s 99.8 1.9E-19 6.5E-24 140.1 16.1 125 20-168 6-136 (153)
11 2azw_A MUTT/nudix family prote 99.8 3.7E-19 1.3E-23 137.0 15.2 128 20-166 16-144 (148)
12 2b0v_A Nudix hydrolase; struct 99.8 6.2E-19 2.1E-23 136.6 15.5 111 48-166 20-137 (153)
13 2o1c_A DATP pyrophosphohydrola 99.8 4.9E-19 1.7E-23 136.3 14.7 135 22-169 9-149 (150)
14 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 3E-19 1E-23 136.7 13.4 127 19-167 6-136 (139)
15 3q1p_A Phosphohydrolase (MUTT/ 99.8 1.9E-19 6.5E-24 147.7 13.1 136 19-174 65-200 (205)
16 3gwy_A Putative CTP pyrophosph 99.8 5.7E-19 1.9E-23 135.5 14.8 107 48-166 18-130 (140)
17 3fjy_A Probable MUTT1 protein; 99.8 2.4E-19 8.2E-24 159.1 14.0 150 22-172 3-178 (364)
18 3shd_A Phosphatase NUDJ; nudix 99.8 8E-19 2.7E-23 136.3 15.3 124 20-166 3-131 (153)
19 3f6a_A Hydrolase, nudix family 99.8 3.2E-19 1.1E-23 139.8 13.1 131 22-168 6-150 (159)
20 3gz5_A MUTT/nudix family prote 99.8 3.3E-19 1.1E-23 150.0 12.2 138 20-175 20-162 (240)
21 4dyw_A MUTT/nudix family prote 99.8 7E-19 2.4E-23 138.0 13.2 124 19-165 26-153 (157)
22 3hhj_A Mutator MUTT protein; n 99.8 9.5E-19 3.2E-23 136.9 13.5 136 9-168 16-156 (158)
23 1k2e_A Nudix homolog; nudix/MU 99.8 5.1E-19 1.7E-23 138.5 11.6 129 23-173 2-140 (156)
24 3ees_A Probable pyrophosphohyd 99.8 1.8E-18 6.1E-23 133.7 14.1 111 48-170 34-148 (153)
25 3o8s_A Nudix hydrolase, ADP-ri 99.8 8.6E-19 2.9E-23 143.9 12.8 134 20-174 68-201 (206)
26 3cng_A Nudix hydrolase; struct 99.8 3E-18 1E-22 138.6 15.8 127 19-172 37-167 (189)
27 2fb1_A Conserved hypothetical 99.8 2.8E-19 9.6E-24 149.1 9.6 135 19-173 10-147 (226)
28 3id9_A MUTT/nudix family prote 99.8 1.3E-18 4.5E-23 137.8 12.5 123 19-165 20-148 (171)
29 1rya_A GDP-mannose mannosyl hy 99.8 2.9E-18 1E-22 133.7 14.1 130 20-164 16-151 (160)
30 3fk9_A Mutator MUTT protein; s 99.8 1.5E-18 5.1E-23 140.6 12.7 127 22-168 4-130 (188)
31 2fvv_A Diphosphoinositol polyp 99.8 9.4E-19 3.2E-23 142.7 11.6 114 19-155 37-153 (194)
32 3r03_A Nudix hydrolase; struct 99.8 2.1E-18 7.1E-23 132.3 12.4 126 21-170 7-137 (144)
33 2kdv_A RNA pyrophosphohydrolas 99.8 7.5E-18 2.6E-22 133.4 15.7 136 20-169 6-155 (164)
34 3exq_A Nudix family hydrolase; 99.8 2.1E-18 7.1E-23 135.8 12.4 126 20-167 8-136 (161)
35 2rrk_A ORF135, CTP pyrophospho 99.8 7.7E-18 2.7E-22 128.4 15.2 109 48-168 21-133 (140)
36 3q93_A 7,8-dihydro-8-oxoguanin 99.8 2.4E-18 8.2E-23 137.8 12.3 110 48-167 37-149 (176)
37 1sjy_A MUTT/nudix family prote 99.8 4E-18 1.4E-22 132.8 12.9 114 21-156 12-134 (159)
38 3eds_A MUTT/nudix family prote 99.8 1.3E-18 4.4E-23 135.8 9.9 99 47-153 33-136 (153)
39 2fkb_A Putative nudix hydrolas 99.8 1.7E-17 5.7E-22 132.4 15.4 113 48-171 50-170 (180)
40 3oga_A Nucleoside triphosphata 99.8 1.1E-17 3.9E-22 131.6 13.9 112 48-165 40-162 (165)
41 3h95_A Nucleoside diphosphate- 99.8 2.5E-17 8.6E-22 134.2 15.9 121 20-161 24-149 (199)
42 2w4e_A MUTT/nudix family prote 99.8 7.9E-18 2.7E-22 130.3 12.2 109 23-154 6-119 (145)
43 2fml_A MUTT/nudix family prote 99.8 1.5E-17 5.2E-22 142.3 14.9 145 19-178 36-206 (273)
44 2pqv_A MUTT/nudix family prote 99.8 3.3E-18 1.1E-22 133.1 9.7 115 20-156 17-133 (154)
45 3f13_A Putative nudix hydrolas 99.8 1.1E-17 3.8E-22 132.7 12.8 106 48-171 28-133 (163)
46 2b06_A MUTT/nudix family prote 99.7 3E-17 1E-21 127.6 14.4 126 20-166 6-133 (155)
47 2jvb_A Protein PSU1, mRNA-deca 99.7 1.4E-17 4.7E-22 128.3 11.3 110 24-156 6-118 (146)
48 1f3y_A Diadenosine 5',5'''-P1, 99.7 1.5E-17 5.1E-22 130.0 10.3 137 19-170 11-162 (165)
49 1hzt_A Isopentenyl diphosphate 99.7 1.8E-17 6E-22 133.8 10.8 130 22-169 32-173 (190)
50 2yvp_A NDX2, MUTT/nudix family 99.7 7.6E-18 2.6E-22 134.9 8.3 112 22-156 41-158 (182)
51 1mut_A MUTT, nucleoside tripho 99.7 3E-18 1E-22 128.8 5.0 106 48-165 17-126 (129)
52 1vk6_A NADH pyrophosphatase; 1 99.7 5.1E-17 1.7E-21 138.9 12.9 112 48-171 152-266 (269)
53 1v8y_A ADP-ribose pyrophosphat 99.7 5.4E-17 1.9E-21 128.6 11.9 110 22-156 34-148 (170)
54 2qjo_A Bifunctional NMN adenyl 99.7 5.9E-17 2E-21 141.5 13.3 129 20-168 201-340 (341)
55 1vhz_A ADP compounds hydrolase 99.7 8E-17 2.7E-21 131.5 11.6 102 48-159 61-167 (198)
56 3o6z_A GDP-mannose pyrophospha 99.7 4.2E-17 1.4E-21 132.3 9.3 111 23-156 46-170 (191)
57 1nqz_A COA pyrophosphatase (MU 99.7 9E-17 3.1E-21 130.0 10.4 115 20-155 32-154 (194)
58 2qjt_B Nicotinamide-nucleotide 99.7 4.1E-16 1.4E-20 136.9 15.3 130 20-169 206-348 (352)
59 1x51_A A/G-specific adenine DN 99.7 2.2E-16 7.4E-21 123.1 11.6 126 20-167 17-148 (155)
60 1q27_A Putative nudix hydrolas 99.7 1.3E-16 4.4E-21 126.2 10.2 107 22-152 34-148 (171)
61 1q33_A Pyrophosphatase, ADP-ri 99.7 3.9E-16 1.3E-20 134.9 14.0 147 20-170 108-278 (292)
62 1mk1_A ADPR pyrophosphatase; n 99.7 5.3E-16 1.8E-20 127.2 13.3 100 47-156 55-162 (207)
63 1g0s_A Hypothetical 23.7 kDa p 99.7 1.6E-16 5.6E-21 130.7 10.2 112 23-156 58-183 (209)
64 3q91_A Uridine diphosphate glu 99.7 1E-16 3.5E-21 133.1 8.7 93 58-159 95-195 (218)
65 3e57_A Uncharacterized protein 99.7 5.1E-16 1.7E-20 128.1 11.7 111 19-152 64-188 (211)
66 2dsc_A ADP-sugar pyrophosphata 99.6 6.7E-16 2.3E-20 127.0 10.5 112 24-154 63-185 (212)
67 2a6t_A SPAC19A8.12; alpha/beta 99.6 8.8E-16 3E-20 131.3 11.0 111 22-155 101-215 (271)
68 3fsp_A A/G-specific adenine gl 99.6 2.6E-14 8.8E-19 127.2 12.7 108 47-170 252-363 (369)
69 1u20_A U8 snoRNA-binding prote 99.5 2.7E-14 9.2E-19 117.7 9.4 120 20-152 31-165 (212)
70 2dho_A Isopentenyl-diphosphate 99.5 2.9E-13 9.9E-18 113.4 13.9 132 21-170 58-217 (235)
71 3qsj_A Nudix hydrolase; struct 99.5 5.2E-13 1.8E-17 111.7 14.6 117 20-151 6-187 (232)
72 2pny_A Isopentenyl-diphosphate 99.5 3.4E-13 1.2E-17 113.7 13.0 132 21-170 69-228 (246)
73 3dup_A MUTT/nudix family prote 99.4 4.3E-12 1.5E-16 109.8 13.0 140 22-176 118-268 (300)
74 3rh7_A Hypothetical oxidoreduc 99.4 3.5E-12 1.2E-16 111.5 11.3 116 20-173 181-298 (321)
75 2xsq_A U8 snoRNA-decapping enz 99.4 9.1E-13 3.1E-17 109.1 7.0 95 48-151 66-172 (217)
76 3bho_A Cleavage and polyadenyl 99.2 2.2E-11 7.7E-16 99.1 5.4 68 20-99 56-129 (208)
77 3kvh_A Protein syndesmos; NUDT 99.0 2E-10 6.8E-15 92.7 5.7 98 17-128 16-115 (214)
No 1
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.92 E-value=4.3e-24 Score=164.36 Aligned_cols=128 Identities=26% Similarity=0.292 Sum_probs=97.4
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEe
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 101 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~ 101 (223)
+.+||+|+++.+ +|||++++ .+.|.||||++|+|||+.+||+||++||||+.+.... +++.+.|
T Consensus 4 ~~aag~vv~~~~--------------~vLL~~r~-~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~-~l~~~~~ 67 (134)
T 3i7u_A 4 EFSAGGVLFKDG--------------EVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILD-YIGEIHY 67 (134)
T ss_dssp EEEEEEEEEETT--------------EEEEEECT-TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEE-EEEEEEE
T ss_pred EEEEEEEEEECC--------------EEEEEEeC-CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEee-eeeeeeE
Confidence 457889998743 79999875 5789999999999999999999999999999988763 6776654
Q ss_pred eccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhh
Q 027463 102 RSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNT 171 (223)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~ 171 (223)
....... .....+++|.+...+.. ..+.+|..+++|++++++.+++.++..+.++.++++.+.+
T Consensus 68 ~~~~~~~-----~~~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~e~~~~l~~~~~r~il~~a~~l~~k 131 (134)
T 3i7u_A 68 WYTLKGE-----RIFKTVKYYLMKYKEGE-PRPSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EEEETTE-----EEEEEEEEEEEEEEEEC-CCCCTTSSEEEEEEHHHHHHHBCSHHHHHHHHHHHHHHHH
T ss_pred EecCCCc-----eEEEEEEEEEEEEcCCc-CcCChhheEEEEEEHHHHhhhcCChHHHHHHHHHHHHHHc
Confidence 3322211 11234677877765432 2245577889999999999999999999999888776554
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.89 E-value=3.2e-22 Score=156.67 Aligned_cols=141 Identities=19% Similarity=0.157 Sum_probs=98.0
Q ss_pred eEEEEEEEeccCCccccccccCCceEEEEEEeCCC-CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEe
Q 027463 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 101 (223)
Q Consensus 23 ~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~-~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~ 101 (223)
.++|+|+|+.... ....++..+|||++++.+ +.|.||||++|+|||+.+||+||++||||+.+.... .++.+.+
T Consensus 4 ra~G~iifr~~~~----~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~-~~~~~~~ 78 (155)
T 3u53_A 4 RACGLIIFRRCLI----PKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLT-IIEGFKR 78 (155)
T ss_dssp CEEEEEEEEECCC----SSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEE-EEEEEEE
T ss_pred eEeEEEEEccccc----cceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccce-eeeeEee
Confidence 4689999984311 111235789999998764 579999999999999999999999999999876542 4444322
Q ss_pred eccCCCccCCCCCCceEEEEEEEEecc-cccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhhcC
Q 027463 102 RSKSRMNSCNSKEGGCRGYMFALEVTE-ELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTER 173 (223)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~v~~-~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~~~ 173 (223)
....... .......+|.+.+.. .....+.+|..+++|++++|+.+++.++..+.+|..+.+.|++..
T Consensus 79 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~a~~~L~~~~ 146 (155)
T 3u53_A 79 ELNYVAR-----NKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLCSIE 146 (155)
T ss_dssp EEEEEET-----TEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHCSHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCC-----cceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcCCHHHHHHHHHHHHHHhCch
Confidence 1111100 011234455555443 223334456678999999999999999999999998888887654
No 3
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.87 E-value=6.6e-21 Score=143.18 Aligned_cols=123 Identities=28% Similarity=0.268 Sum_probs=94.0
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEe
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 101 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~ 101 (223)
..++++|+++.++ +|||++++. +.|.||||+++.|||+.+||+||++||||+.+... ..++.+.|
T Consensus 2 ~~~~~~vi~~~~~-------------~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~ 66 (126)
T 1vcd_A 2 ELGAGGVVFNAKR-------------EVLLLRDRM-GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVL-LPLYPTRY 66 (126)
T ss_dssp EEEEEEEEECTTS-------------CEEEEECTT-SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEE-EEEEEEEE
T ss_pred eeEEEEEEEcCCC-------------EEEEEEECC-CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeec-cEEeEEEE
Confidence 4577888887543 799998876 78999999999999999999999999999998766 36777766
Q ss_pred eccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHh
Q 027463 102 RSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGM 169 (223)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l 169 (223)
..... ....++|.+...... ..++.+..+++|++++++.+.+.++..+.++..+...+
T Consensus 67 ~~~~~---------~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~~el~~~~~~~~~~~~l~~~~~~l 124 (126)
T 1vcd_A 67 VNPKG---------VEREVHWFLMRGEGA-PRLEEGMTGAGWFSPEEARALLAFPEDLGLLEVALERL 124 (126)
T ss_dssp ECTTS---------CEEEEEEEEEEEESC-CCCCTTCCEEEEECHHHHHHHBCSHHHHHHHHHHHHHS
T ss_pred ecCCc---------eEEEEEEEEEEcCCC-CCCCcceeeeEEcCHHHHHHhhcChhHHHHHHHHHHhc
Confidence 54221 234566666544322 22445667899999999999999998888888877654
No 4
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.87 E-value=7.2e-21 Score=145.15 Aligned_cols=131 Identities=21% Similarity=0.231 Sum_probs=96.3
Q ss_pred ceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC-CCeecCCcccCCCCCHHHHHHHHHHHHhCcee---eecCCCe
Q 027463 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-DDLVFPKGGWEDDETVSEAACREALEEAGVRG---LLDENPL 96 (223)
Q Consensus 21 ~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~-~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~---~~~~~~l 96 (223)
.+.++++|+++.++ +..+|||++++.. +.|.||||++++|||+.+||+||++||||+.+ .....++
T Consensus 2 ~~~~~~~vi~~~~~----------~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~ 71 (138)
T 1ktg_A 2 VVKAAGLVIYRKLA----------GKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCH 71 (138)
T ss_dssp CEEEEEEEEEEEET----------TEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEE
T ss_pred ceEEEEEEEEEecC----------CCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEecccc
Confidence 35678888888643 3568999998643 47999999999999999999999999999953 3321134
Q ss_pred eEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhh
Q 027463 97 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMN 170 (223)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~ 170 (223)
+.+.|..... ....++|.+.+..........|..+++|++++++.+++.++..+.++..+..+++
T Consensus 72 ~~~~~~~~~~---------~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 136 (138)
T 1ktg_A 72 ETLFYEAKGK---------PKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIADYAEMGSLLRKFSAFLA 136 (138)
T ss_dssp EEEEEEETTE---------EEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCC---------ceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhhccchHHHHHHHHHHHhh
Confidence 4444543311 2456788887765322223456678899999999999999988989888877663
No 5
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.86 E-value=1e-20 Score=143.50 Aligned_cols=128 Identities=26% Similarity=0.294 Sum_probs=96.2
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEe
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 101 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~ 101 (223)
..++++|+++. + +|||++++. +.|.||||+++.|||+.+||+||++||||+.+... .+++.+.+
T Consensus 4 ~~~~~~vi~~~-~-------------~vLl~~r~~-~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~ 67 (134)
T 2pbt_A 4 EFSAGGVLFKD-G-------------EVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL-DYIGEIHY 67 (134)
T ss_dssp EEEEEEEEEET-T-------------EEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEEE
T ss_pred ceEEEEEEEEC-C-------------EEEEEEeCC-CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEe-eeeeEEEE
Confidence 35667777762 1 799999877 88999999999999999999999999999998766 36776654
Q ss_pred eccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhh
Q 027463 102 RSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNT 171 (223)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~ 171 (223)
....... ......++|.+........ +.++..+++|++++++.+++.++..+.++..++..+.+
T Consensus 68 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~ 131 (134)
T 2pbt_A 68 WYTLKGE-----RIFKTVKYYLMKYKEGEPR-PSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EEEETTE-----EEEEEEEEEEEEEEEECCC-CCTTSSEEEEEEHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred EeeCCCc-----EEEEEEEEEEEEecCCCcC-CCcceeEEEEEcHHHHHhhhcchhHHHHHHHHHHHhhh
Confidence 4332111 1123567777766543222 33366789999999999999999999999988877754
No 6
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.86 E-value=2.2e-20 Score=144.74 Aligned_cols=137 Identities=21% Similarity=0.215 Sum_probs=97.4
Q ss_pred eEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCee-EEEe
Q 027463 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG-EWEF 101 (223)
Q Consensus 23 ~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~-~~~~ 101 (223)
.+++++++...+ +..+|||++|...+.|.||||++|+|||+.+||+||++||||+.+......+. .+.+
T Consensus 6 ~~v~vvi~~~~~----------~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 75 (149)
T 3son_A 6 FQVLVIPFIKTE----------ANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASI 75 (149)
T ss_dssp CEEEEEEEEECS----------SSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEE
T ss_pred eEEEEEEEEecC----------CCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecc
Confidence 456677776543 35699999998888999999999999999999999999999999765311122 1222
Q ss_pred eccCCCccCCCCCCceEEEEEEEEeccc-ccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhhc
Q 027463 102 RSKSRMNSCNSKEGGCRGYMFALEVTEE-LESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTE 172 (223)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~v~~~-~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~~ 172 (223)
...... + ........++|.+.+... .......|..+++|++++++.+++.++..+.++..+.+++...
T Consensus 76 ~~~~~~--~-~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 76 PNFHFS--F-NKPYVVPEYCFAIDLTSCSYQVTLSLEHSELRWVSYESAIQLLEWDSNKTALYELNERLKNN 144 (149)
T ss_dssp EGGGTC--S-SSCSEEEEEEEEEECTTTGGGCCCCTTEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHTT
T ss_pred cceeec--c-CCceEeEEEEEEEEcCCCCCcccCCCceeeEEEeCHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 111111 0 111234567888887631 1222235677889999999999999999999999998887765
No 7
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.84 E-value=2.5e-20 Score=145.44 Aligned_cols=131 Identities=20% Similarity=0.188 Sum_probs=97.7
Q ss_pred cccCCceeEEEEEEEeccCCccccccccCCceEEEEEEeCC---CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeec
Q 027463 16 RYEDQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLD 92 (223)
Q Consensus 16 ~~~~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~---~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~ 92 (223)
++......++++++++.+ ++|||+++.+ .+.|.||||+++.|||+.+||+||++||||+.+...
T Consensus 14 ~~~~~~~~~v~~~i~~~~-------------~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~ 80 (156)
T 3gg6_A 14 RLRKNVCYVVLAVFLSEQ-------------DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPE 80 (156)
T ss_dssp CCCTTCEEEEEEECBCTT-------------SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE
T ss_pred ccCCceEEEEEEEEEeCC-------------CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEee
Confidence 565667777777776643 3899999976 467999999999999999999999999999998766
Q ss_pred CCCeeEEEeeccCCCccCCCCCCceEEEEEEEEeccc-ccC--CCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHh
Q 027463 93 ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEE-LES--WPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGM 169 (223)
Q Consensus 93 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~-~~~--~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l 169 (223)
..++.+.... ....++|.+.+... ... .+++|..+++|++++++.+.+....+..++..+...+
T Consensus 81 -~~~~~~~~~~------------~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~ 147 (156)
T 3gg6_A 81 -TLLSVEERGP------------SWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHDILHLVELAAQYR 147 (156)
T ss_dssp -EEEEEEESST------------TEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSCTHHHHHHHHHHHHH
T ss_pred -eEEEEEcCCC------------CEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccchhHHHHHHHHHHHh
Confidence 3666554211 12456776665432 211 1334667899999999999999999998888877776
Q ss_pred hhc
Q 027463 170 NTE 172 (223)
Q Consensus 170 ~~~ 172 (223)
...
T Consensus 148 ~~~ 150 (156)
T 3gg6_A 148 QQA 150 (156)
T ss_dssp HHH
T ss_pred hcC
Confidence 654
No 8
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.84 E-value=8.8e-21 Score=153.09 Aligned_cols=137 Identities=18% Similarity=0.143 Sum_probs=97.0
Q ss_pred CCceeEEEEEEEeccCCccccccccCC----ceEEEEEEeC----------CCCCeecCCcccCCCCCHHHHHHHHHHHH
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEK----KVLVLMISTP----------NRDDLVFPKGGWEDDETVSEAACREALEE 84 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~----~~~VLLv~r~----------~~~~W~lPGG~vE~gEs~~eAA~REl~EE 84 (223)
.+..++++|+++..++ + .++|||++|. ..+.|.||||++|+|||+.+||+||++||
T Consensus 24 ~p~~~~v~~vv~~~~~----------~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EE 93 (187)
T 3i9x_A 24 TPDGYTSDMILTTVKE----------LNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEE 93 (187)
T ss_dssp CCSEEEEEEEEEEEEE----------ETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHH
T ss_pred CcccceEEEEEEEEcC----------CCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHH
Confidence 3445899999998754 2 4689999992 34679999999999999999999999999
Q ss_pred hCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEEEEEeccc--ccCCCCcCcceeEEEeHHHHhhccCChHHHHHH
Q 027463 85 AGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEE--LESWPEQANYKRIWLSVEEAFKSCRYDWMIDAL 162 (223)
Q Consensus 85 tGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~--~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l 162 (223)
||+.+... ..++.+.+...... ......+|.+.+... ....+.+|..+++|++++++..+...+..+.++
T Consensus 94 tGl~~~~~-~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~il 165 (187)
T 3i9x_A 94 TSLTDIPL-IPFGVFDKPGRDPR-------GWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDML 165 (187)
T ss_dssp HCCCSCCC-EEEEEECCTTSSTT-------SSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTHHHHH
T ss_pred HCCCCcce-EEEEEEcCCccCCC-------CCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccHHHHH
Confidence 99987655 36666543322111 122333444433321 111134466789999999999876666788899
Q ss_pred HHHHHHhhhcC
Q 027463 163 KKFLLGMNTER 173 (223)
Q Consensus 163 ~~~~~~l~~~~ 173 (223)
..++.+++...
T Consensus 166 ~~a~~~l~~~~ 176 (187)
T 3i9x_A 166 KKAFSAITEEF 176 (187)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 98888887654
No 9
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.83 E-value=7.6e-20 Score=148.85 Aligned_cols=142 Identities=17% Similarity=0.209 Sum_probs=93.4
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCce-eeecCCCeeE
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVR-GLLDENPLGE 98 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~-~~~~~~~l~~ 98 (223)
..+.++++++++.++ .+|||++++..+.|.||||++|.|||+.+||+||++||||+. +.+....+..
T Consensus 43 ~~h~~~~~vv~~~~~------------~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~ 110 (197)
T 3fcm_A 43 IAHLTSSAFAVNKER------------NKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFA 110 (197)
T ss_dssp SEEEEEEEEEECTTS------------CEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSE
T ss_pred CccEEEEEEEEECCC------------CEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceE
Confidence 556778888876542 489999998888999999999999999999999999999998 5543222222
Q ss_pred EEee-ccCCC--ccCCCCCCceEEEEEEEEeccccc-CCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhhcCc
Q 027463 99 WEFR-SKSRM--NSCNSKEGGCRGYMFALEVTEELE-SWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTERT 174 (223)
Q Consensus 99 ~~~~-~~~~~--~~~~~~~~~~~~~~f~~~v~~~~~-~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~~~~ 174 (223)
+.+. ..... ..+ .........+|.+.+..... ....+|..+++|++++++.+++.++.++.++..+..++++..+
T Consensus 111 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l~~~~~ 189 (197)
T 3fcm_A 111 LDVLTVNGHIKRGKY-VSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSEPHMIPIYEKLINKLKTQSK 189 (197)
T ss_dssp EEEEEECCEEETTEE-ECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCCGGGHHHHHHHHHHHHC---
T ss_pred EEEeeecCccccCcc-cCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCCHHHHHHHHHHHHHHHhccc
Confidence 2221 11110 000 00011122455555543322 2234566789999999999999999999999999999887653
No 10
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.83 E-value=1.9e-19 Score=140.13 Aligned_cols=125 Identities=15% Similarity=0.173 Sum_probs=92.8
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC-----CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCC
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDEN 94 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~-----~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~ 94 (223)
..+.++++|+++.+ ++|||++|... +.|.||||+++.|||+.+||+||++||||+.+... .
T Consensus 6 ~~~~~v~~vi~~~~-------------~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~-~ 71 (153)
T 3grn_A 6 PYIISVYALIRNEK-------------GEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPG-D 71 (153)
T ss_dssp CEEEEEEEEEECTT-------------CCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC-S
T ss_pred ceEEEEEEEEEcCC-------------CcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecc-e
Confidence 45777888887643 37999998764 67999999999999999999999999999998766 3
Q ss_pred CeeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhcc-CChHHHHHHHHHHHH
Q 027463 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC-RYDWMIDALKKFLLG 168 (223)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l-~~~~~~~~l~~~~~~ 168 (223)
.++.+.+..... ....++|.+....... .+..+..+++|++++++.++. ..+..+.++..+...
T Consensus 72 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~l~~~ 136 (153)
T 3grn_A 72 IAGQVNFELTEK---------KVIAIVFDGGYVVADV-KLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDRE 136 (153)
T ss_dssp EEEEEEEECSSC---------EEEEEEEEEEECCCCC-CCCTTEEEEEEECHHHHTTCSSSCHHHHHHHHHHHHH
T ss_pred EEEEEEEecCCc---------eEEEEEEEEEecCCcE-ecCCCcceEEEEEHHHhhhcccchHHHHHHHHHHhcc
Confidence 777776554322 2345666665443221 123566788999999999987 778787777776543
No 11
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.82 E-value=3.7e-19 Score=136.98 Aligned_cols=128 Identities=27% Similarity=0.323 Sum_probs=90.0
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEE
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW 99 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~ 99 (223)
..+..+++|+++.. .++|||++++ .+.|.||||++++|||+.+||+||++||||+.+... ..++.+
T Consensus 16 ~~~~~~~~vi~~~~------------~~~vLl~~r~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~ 81 (148)
T 2azw_A 16 QTRYAAYIIVSKPE------------NNTMVLVQAP-NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIG-CYLGEA 81 (148)
T ss_dssp EECCEEEEECEEGG------------GTEEEEEECT-TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEE
T ss_pred eeeeEEEEEEECCC------------CCeEEEEEcC-CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEee-eEEEEE
Confidence 34556777777652 2389999874 478999999999999999999999999999998766 356654
Q ss_pred E-eeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHH
Q 027463 100 E-FRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFL 166 (223)
Q Consensus 100 ~-~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~ 166 (223)
. +....... .......++|.+........ +.++..+++|++++++.+++..+..+.++..++
T Consensus 82 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 144 (148)
T 2azw_A 82 DEYFYSNHRQ----TAYYNPGYFYVANTWRQLSE-PLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWL 144 (148)
T ss_dssp EEEEEETTTT----EEEEEEEEEEEEEEEEECSS-CC-CCSEEEEECHHHHHHHBSCHHHHHHHHHHH
T ss_pred EEEEcCCCCC----cceEEEEEEEEEEcCcCCcC-CCCceeeEEEeeHHHHHhhhcchhHHHHHHHHH
Confidence 2 11111110 00123466777765543221 334556889999999999999998888887776
No 12
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.81 E-value=6.2e-19 Score=136.60 Aligned_cols=111 Identities=21% Similarity=0.280 Sum_probs=80.0
Q ss_pred EEEEEEeCCCC---CeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEEEE
Q 027463 48 LVLMISTPNRD---DLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFAL 124 (223)
Q Consensus 48 ~VLLv~r~~~~---~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 124 (223)
+|||+++...+ .|.||||++++|||+.+||+||++||||+.+... ..++.+.|..+... .....++|.+
T Consensus 20 ~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~~~~~-------~~~~~~~f~~ 91 (153)
T 2b0v_A 20 KYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPE-VLTGIYHWTCASNG-------TTYLRFTFSG 91 (153)
T ss_dssp EEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEE-EEEEEEEEEETTTT-------EEEEEEEEEE
T ss_pred EEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccc-eEEEEEEEeCCCCC-------cEEEEEEEEE
Confidence 79999987654 6999999999999999999999999999998766 37777766543311 1234566777
Q ss_pred Eeccccc-CCCCcCcceeEEEeHHHHhhc---cCChHHHHHHHHHH
Q 027463 125 EVTEELE-SWPEQANYKRIWLSVEEAFKS---CRYDWMIDALKKFL 166 (223)
Q Consensus 125 ~v~~~~~-~~~~~e~~~~~W~~~~e~~~~---l~~~~~~~~l~~~~ 166 (223)
....... ...+.+..+++|++++++.++ ...+.++.++..++
T Consensus 92 ~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~~~ 137 (153)
T 2b0v_A 92 QVVSFDPDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDYH 137 (153)
T ss_dssp EEEEECTTSCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHHHH
T ss_pred EeCCCCCCCCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHHHH
Confidence 6544222 223446678899999999984 45566666665543
No 13
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.81 E-value=4.9e-19 Score=136.26 Aligned_cols=135 Identities=19% Similarity=0.160 Sum_probs=92.1
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCC-CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecC-CCeeEE
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE-NPLGEW 99 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~-~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~-~~l~~~ 99 (223)
+.++++++++.++ ++|||++++. .+.|.||||+++.|||+.+||+||++||||+.+.... ..++..
T Consensus 9 ~~~v~~~i~~~~~------------~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~ 76 (150)
T 2o1c_A 9 PVSILVVIYAQDT------------KRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQ 76 (150)
T ss_dssp SEEEEEEEEETTT------------CEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEE
T ss_pred ceEEEEEEEeCCC------------CEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeee
Confidence 3567788887532 3899999876 5789999999999999999999999999999976532 133332
Q ss_pred ---Eeecc-CCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHh
Q 027463 100 ---EFRSK-SRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGM 169 (223)
Q Consensus 100 ---~~~~~-~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l 169 (223)
.|... .....++........++|.+.+...... ...|..+++|++++++.++...+..+.++..+..++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 149 (150)
T 2o1c_A 77 RTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQI-VFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINA 149 (150)
T ss_dssp EEEEEECCGGGGGGBCTTCCEEEEEEEEEEESSCCCC-CCSSSSCEEEEEHHHHHHHCSCHHHHHHHHHHTTC-
T ss_pred ceeeeeeecccccccCCCCcceEEEEEEEEcCCCCCc-ChhHhhccEeecHHHHHhhhcCHHHHHHHHHHHHhc
Confidence 12100 0000111112235677888777643222 234667899999999999988888888888776543
No 14
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.81 E-value=3e-19 Score=136.70 Aligned_cols=127 Identities=20% Similarity=0.210 Sum_probs=89.7
Q ss_pred CCceeEEEEEEEeccCCccccccccCCceE--EEEEEeCCC-CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCC
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVL--VLMISTPNR-DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP 95 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~--VLLv~r~~~-~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~ 95 (223)
..++..+++|+++.+. +++ |||++|... +.|.||||++++|||+.+||+||++||||+.+... ..
T Consensus 6 ~~p~~~v~~vi~~~~~-----------~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~ 73 (139)
T 2yyh_A 6 KTPLLATDVIIRLWDG-----------ENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLH-KL 73 (139)
T ss_dssp CCCEEEEEEEEEEEET-----------TEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEE-EE
T ss_pred cCCeEEEEEEEEEEcC-----------CCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccc-eE
Confidence 4678889999998543 235 999998754 45999999999999999999999999999998765 35
Q ss_pred eeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHh-hccCChHHHHHHHHHHH
Q 027463 96 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAF-KSCRYDWMIDALKKFLL 167 (223)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~-~~l~~~~~~~~l~~~~~ 167 (223)
++.+.+.... .......++|.+...+... +.++..+++|++++++. +.+.++ .+.++..++.
T Consensus 74 ~~~~~~~~~~-------~~~~~~~~~f~~~~~~~~~--~~~e~~~~~W~~~~el~~~~l~~~-~~~~l~~~l~ 136 (139)
T 2yyh_A 74 MGVYSDPERD-------PRAHVVSVVWIGDAQGEPK--AGSDAKKVKVYRLEEIPLDKLVFD-HKKIILDFLK 136 (139)
T ss_dssp EEEECCTTSC-------TTSCEEEEEEEEEEESCCC--CCTTEEEEEEECTTSCCGGGBCTT-HHHHHHHHHH
T ss_pred EEEECCCCcC-------CCceEEEEEEEEecCCccC--CCCCcceEEEEEHHHCCHhhcCCC-HHHHHHHHHh
Confidence 6655432211 1123456778777643322 44466788999999999 444444 4556665543
No 15
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.81 E-value=1.9e-19 Score=147.72 Aligned_cols=136 Identities=12% Similarity=0.074 Sum_probs=99.6
Q ss_pred CCceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeE
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 98 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~ 98 (223)
..++..+++++++. ++|||++++..+.|.||||++++|||+.+||+||++||||+.+... ..++.
T Consensus 65 ~~~~~~v~~vv~~~--------------~~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~-~~l~~ 129 (205)
T 3q1p_A 65 QTPKVDIRAVVFQN--------------EKLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHF-KLLAI 129 (205)
T ss_dssp CCCEEEEEEEEEET--------------TEEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEE
T ss_pred CCCcceEEEEEEEC--------------CEEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccc-eEEEE
Confidence 35677888888862 2799999987789999999999999999999999999999998866 36776
Q ss_pred EEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhhcCc
Q 027463 99 WEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTERT 174 (223)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~~~~ 174 (223)
+.+...... +.......++|.+....... .+..|..+++|++++++..+...+..++.+..++..+....+
T Consensus 130 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~E~~~~~w~~~~el~~l~~~~~~~~~i~~~~~~~~~~~~ 200 (205)
T 3q1p_A 130 FDKEKHQPS----PSATHVYKIFIGCEIIGGEK-KTSIETEEVEFFGENELPNLSIARNTEDQIKEMFAYMKDPQK 200 (205)
T ss_dssp EEHHHHSCC----CCSSCEEEEEEEEEEEEECC-CCCTTSCCEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCTTS
T ss_pred EeccccCCC----CCCceEEEEEEEEEecCCcc-CCCCcceEEEEEeHHHhhhcCCCccHHHHHHHHHHHHhCCCC
Confidence 654322211 11223455677776643222 234567789999999999998888889999998887776543
No 16
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.81 E-value=5.7e-19 Score=135.47 Aligned_cols=107 Identities=18% Similarity=0.071 Sum_probs=80.9
Q ss_pred EEEEEEeCCC------CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEE
Q 027463 48 LVLMISTPNR------DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYM 121 (223)
Q Consensus 48 ~VLLv~r~~~------~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (223)
+|||++|... +.|.||||+++.||++.+||+||++||||+.+... ..++.+.+..... ....++
T Consensus 18 ~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~-~~~~~~~~~~~~~---------~~~~~~ 87 (140)
T 3gwy_A 18 KYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVG-EKLLTVHHTYPDF---------EITMHA 87 (140)
T ss_dssp EEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEEEEEECCCSSC---------CEEEEE
T ss_pred EEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEec-eEEEEEEEEeCCc---------eEEEEE
Confidence 7999998743 56999999999999999999999999999998776 3677766544322 245678
Q ss_pred EEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHH
Q 027463 122 FALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFL 166 (223)
Q Consensus 122 f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~ 166 (223)
|.+.+..... ...|..+++|++++++.++...+..+.+++.+.
T Consensus 88 f~~~~~~~~~--~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~ 130 (140)
T 3gwy_A 88 FLCHPVGQRY--VLKEHIAAQWLSTREMAILDWAEADKPIVRKIS 130 (140)
T ss_dssp EEEEECCSCC--CCCSSCEEEEECHHHHTTSCBCGGGHHHHHHHH
T ss_pred EEEEecCCcc--cccccceeEeccHHHHhhCCCCcccHHHHHHHH
Confidence 8777664321 234567889999999999888887777776654
No 17
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.81 E-value=2.4e-19 Score=159.08 Aligned_cols=150 Identities=22% Similarity=0.216 Sum_probs=102.3
Q ss_pred eeEEEEEEEeccCCc----------cccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeee
Q 027463 22 RLVAGCIPYKFEKND----------ENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLL 91 (223)
Q Consensus 22 r~~~g~I~~~~~~~~----------~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~ 91 (223)
..++|+|+|+..... .-.....++..+|||++++..+.|.||||++|+|||+.+||+||++||||+.+..
T Consensus 3 ~~aag~i~~r~~~~~~i~~~~~i~~~~~~~i~~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~ 82 (364)
T 3fjy_A 3 LEAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKL 82 (364)
T ss_dssp CCEEEEEEEEECTTSHHHHCGGGGGGSCHHHHHTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEE
T ss_pred ccccCcEEEEeeccccccCCccccccccccccCCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeee
Confidence 457999999975320 0000111356799999998888899999999999999999999999999999877
Q ss_pred cCCCeeEEEeeccCCCcc----CCCCCCceEEEEEEEEecccc---------c---CCCCcCcceeEEEeHHHHhhccCC
Q 027463 92 DENPLGEWEFRSKSRMNS----CNSKEGGCRGYMFALEVTEEL---------E---SWPEQANYKRIWLSVEEAFKSCRY 155 (223)
Q Consensus 92 ~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~f~~~v~~~~---------~---~~~~~e~~~~~W~~~~e~~~~l~~ 155 (223)
.. .++.+.|........ +++......+++|.+...... . ....+|..+++|++++++.+++.+
T Consensus 83 ~~-~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 161 (364)
T 3fjy_A 83 GP-YLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSH 161 (364)
T ss_dssp EE-EEEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSC
T ss_pred cc-ccceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcc
Confidence 63 667655543321100 000111245677777665421 1 112346678999999999999999
Q ss_pred hHHHHHHHHHHHHhhhc
Q 027463 156 DWMIDALKKFLLGMNTE 172 (223)
Q Consensus 156 ~~~~~~l~~~~~~l~~~ 172 (223)
+..+.++..+...+..+
T Consensus 162 ~~~r~il~~~~~~l~~g 178 (364)
T 3fjy_A 162 STDKDTLAVFVDRVQEG 178 (364)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHhccC
Confidence 99999999999888654
No 18
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.81 E-value=8e-19 Score=136.30 Aligned_cols=124 Identities=19% Similarity=0.275 Sum_probs=87.6
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCC--CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCee
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN--RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~--~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~ 97 (223)
.++.++++|+.+. ++|||++|.. .+.|.||||++|.|||+.+||+||++||||+.+... ..++
T Consensus 3 ~p~~~v~~ii~~~--------------~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~ 67 (153)
T 3shd_A 3 KPHVTVACVVHAE--------------GKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQ-HFIR 67 (153)
T ss_dssp CCEEEEEEEEEET--------------TEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC-EEEE
T ss_pred CCceEEEEEEEeC--------------CEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccC-cEEE
Confidence 4566777766652 2799998853 346999999999999999999999999999998766 3677
Q ss_pred EEEeeccCCCccCCCCCCceEEEEEEEEeccccc-CCCCcCcceeEEEeHHHHhh--ccCChHHHHHHHHHH
Q 027463 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELE-SWPEQANYKRIWLSVEEAFK--SCRYDWMIDALKKFL 166 (223)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~-~~~~~e~~~~~W~~~~e~~~--~l~~~~~~~~l~~~~ 166 (223)
.+.|...+.. ....++|.+.+..... .....|..+++|++++++.. ....+..+.++..++
T Consensus 68 ~~~~~~~~~~--------~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~ 131 (153)
T 3shd_A 68 MHQWIAPDKT--------PFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQ 131 (153)
T ss_dssp EEEECCTTSC--------CEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHHHTCSCBSSTHHHHHHHHHH
T ss_pred EEEEecCCCc--------eEEEEEEEEEccccCcCCCCcccceeeEEecHHHhhccccccCchHHHHHHHHH
Confidence 7766544321 2456778887665432 22344667889999999932 234566666665554
No 19
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.81 E-value=3.2e-19 Score=139.83 Aligned_cols=131 Identities=18% Similarity=0.074 Sum_probs=87.1
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEE--
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW-- 99 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~-- 99 (223)
+.++++|+++. + +|||++++..+.|.||||++|.|||+.+||+||++||||+.+.... .++.+
T Consensus 6 ~~~v~~vi~~~-~-------------~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~~ 70 (159)
T 3f6a_A 6 HFTVSVFIVCK-D-------------KVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYN-PIDINLK 70 (159)
T ss_dssp CEEEEEEEEET-T-------------EEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECC-CCCHHHH
T ss_pred eEEEEEEEEEC-C-------------EEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecc-ccccccc
Confidence 56677878772 2 7999999888899999999999999999999999999999987663 44321
Q ss_pred ---------EeeccCCC--ccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhcc-CChHHHHHHHHHHH
Q 027463 100 ---------EFRSKSRM--NSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC-RYDWMIDALKKFLL 167 (223)
Q Consensus 100 ---------~~~~~~~~--~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l-~~~~~~~~l~~~~~ 167 (223)
.+..+... ..+ ........++|.+...........+|..+++|++++++.++. ..+..+.+...+..
T Consensus 71 ~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 149 (159)
T 3f6a_A 71 KSCDLSGEKLLINPIHTILGDV-SPNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAHNIQENILVMATEALD 149 (159)
T ss_dssp HHHHHTTCEEECCCSEEEEECS-SSSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTCSSSCHHHHHHHHHHHH
T ss_pred ccccccccccccCccccccccC-CCCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhCcCCChhHHHHHHHHHH
Confidence 00000000 000 011123456777776543222234566789999999999887 55555555555544
Q ss_pred H
Q 027463 168 G 168 (223)
Q Consensus 168 ~ 168 (223)
.
T Consensus 150 ~ 150 (159)
T 3f6a_A 150 L 150 (159)
T ss_dssp H
T ss_pred H
Confidence 3
No 20
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.80 E-value=3.3e-19 Score=150.04 Aligned_cols=138 Identities=12% Similarity=0.106 Sum_probs=98.1
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCC---CCCeecCCcccCC--CCCHHHHHHHHHHHHhCceeeecCC
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWED--DETVSEAACREALEEAGVRGLLDEN 94 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~---~~~W~lPGG~vE~--gEs~~eAA~REl~EEtGl~~~~~~~ 94 (223)
.+...++||++...+ +.++|||++|.. .+.|.||||++++ |||+.+||+||++||||+.+....
T Consensus 20 ~p~v~v~~vi~~~~~----------~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~- 88 (240)
T 3gz5_A 20 AQLLTVDAVLFTYHD----------QQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIE- 88 (240)
T ss_dssp -CEEEEEEEEEEEET----------TEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEE-
T ss_pred CCccEEEEEEEEEeC----------CCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCcee-
Confidence 567888999997654 367999999875 3679999999999 999999999999999999976553
Q ss_pred CeeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhhcCc
Q 027463 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTERT 174 (223)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~~~~ 174 (223)
.++.+.+...... ......+|.+.+.........++..+++|++++++........++.++..++.++..+..
T Consensus 89 ~l~~~~~~~r~~~-------~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~kl~ 161 (240)
T 3gz5_A 89 QLCTVGNNSRDAR-------GWSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQKAL 161 (240)
T ss_dssp EEEEEEESSSSTT-------SCEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCccCCC-------ceEEEEEEEEEecccccCCCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHhcc
Confidence 6677665332211 123455666655542221123456789999999998654445568888888888777543
Q ss_pred c
Q 027463 175 Q 175 (223)
Q Consensus 175 ~ 175 (223)
.
T Consensus 162 y 162 (240)
T 3gz5_A 162 Y 162 (240)
T ss_dssp H
T ss_pred c
Confidence 3
No 21
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.80 E-value=7e-19 Score=137.98 Aligned_cols=124 Identities=17% Similarity=0.117 Sum_probs=88.8
Q ss_pred CCceeEEEEEEEeccCCccccccccCCceEEEEEEeCC---CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCC
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP 95 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~---~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~ 95 (223)
..++.++++|+++. + +|||+++.+ .+.|.||||+++.|||+.+||+||++||||+.+... ..
T Consensus 26 ~~~~~~v~~vi~~~-~-------------~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~ 90 (157)
T 4dyw_A 26 EQPRVGCGAAIVRD-G-------------RILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERA-TL 90 (157)
T ss_dssp CCCEEEEEEEEEET-T-------------EEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESC-EE
T ss_pred CCceeEEEEEEEEC-C-------------EEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccC-cE
Confidence 35678888888872 2 799999974 467999999999999999999999999999998766 36
Q ss_pred eeEEEeeccCCCccCCCCCCceEEEEEEEEecc-cccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHH
Q 027463 96 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTE-ELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKF 165 (223)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~-~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~ 165 (223)
++.+.+....... ....++|.+.+.. .......++..+++|++++++.+. ..+..+.++..+
T Consensus 91 ~~~~~~~~~~~~~-------~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~-l~~~~~~~l~~l 153 (157)
T 4dyw_A 91 LCVVDHIDAANGE-------HWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQP-LTHATRIALEQV 153 (157)
T ss_dssp EEEEEEEETTTTE-------EEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCSS-BCHHHHHHHHHH
T ss_pred EEEEEeeccCCCc-------EEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHcccc-cCHHHHHHHHHH
Confidence 7776554432111 2345666665443 222223345678899999999884 456666666554
No 22
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.79 E-value=9.5e-19 Score=136.85 Aligned_cols=136 Identities=18% Similarity=0.110 Sum_probs=88.5
Q ss_pred ccccccccccCCceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC----CCeecCCcccCCCCCHHHHHHHHHHHH
Q 027463 9 RKGRLRQRYEDQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEE 84 (223)
Q Consensus 9 ~~~~~~~~~~~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~----~~W~lPGG~vE~gEs~~eAA~REl~EE 84 (223)
.+|............++++++++.+ ++|||++|... +.|.||||++|.||++.+||+||++||
T Consensus 16 ~~gP~~~~~~~~~~~~~~~~i~~~~-------------~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE 82 (158)
T 3hhj_A 16 TQGPGSMPIKSSLLIVVACALLDQD-------------NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEE 82 (158)
T ss_dssp -----------CEEEEEEEEEBCTT-------------SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHH
T ss_pred cCCCccCCCCCceEEEEEEEEEeCC-------------CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHH
Confidence 3444333333344555556555433 38999998754 579999999999999999999999999
Q ss_pred hCceeeecCC-CeeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHH
Q 027463 85 AGVRGLLDEN-PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALK 163 (223)
Q Consensus 85 tGl~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~ 163 (223)
||+.+..... .++.+.+..... ....++|.+...... ....+..+++|++++++.++...+.++.++.
T Consensus 83 tGl~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~il~ 151 (158)
T 3hhj_A 83 LGVHVQADNLFPLTFASHGYETF---------HLLMPLYFCSHYKGV--AQGREGQNLKWIFINDLDKYPMPEADKPLVQ 151 (158)
T ss_dssp HCCBCCGGGCEEEEEEEEECSSC---------EEEEEEEEESCCBSC--CCCTTSCEEEEEEGGGGGGSCCCTTTHHHHH
T ss_pred hCcEeecceEEEEEEEeeccCCc---------EEEEEEEEEEECCCc--cCCccccceEEEcHHHHhhCCCCcchHHHHH
Confidence 9999766521 234443333221 235567766654331 1234556889999999999888888888888
Q ss_pred HHHHH
Q 027463 164 KFLLG 168 (223)
Q Consensus 164 ~~~~~ 168 (223)
.+...
T Consensus 152 ~~~~~ 156 (158)
T 3hhj_A 152 VLKNF 156 (158)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 77654
No 23
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.79 E-value=5.1e-19 Score=138.52 Aligned_cols=129 Identities=15% Similarity=0.067 Sum_probs=88.0
Q ss_pred eEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEee
Q 027463 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFR 102 (223)
Q Consensus 23 ~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~ 102 (223)
.++++|+++ ++ +|||++++..+.|.||||++|+|||+.+||+||++||||+.+.... .++.+.+.
T Consensus 2 ~~~~~vi~~-~~-------------~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~~~ 66 (156)
T 1k2e_A 2 IVTSGVLVE-NG-------------KVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIG-FTYGIIDE 66 (156)
T ss_dssp EEEEEECEE-TT-------------EEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECC-CCCCCBSS
T ss_pred eEEEEEEEE-CC-------------EEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceecc-ceeeeccc
Confidence 567788877 32 7999999877889999999999999999999999999999987653 33211110
Q ss_pred ----ccCC------CccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhhc
Q 027463 103 ----SKSR------MNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTE 172 (223)
Q Consensus 103 ----~~~~------~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~~ 172 (223)
.... ...++........++|.+... ..+..+++|++++++.++...+..+.++..++..+...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-------~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 139 (156)
T 1k2e_A 67 NAVERPMPLVILEEVVKYPEETHIHFDLIYLVKRV-------GGDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLYRL 139 (156)
T ss_dssp SEEECCCCSEEEEEEEECSSCEEEEEEEEEEEEEE-------EECCCSCEEEEGGGGGGSCBSTTHHHHHHHHHHHHHHH
T ss_pred ccccccccceeeeeeecCCCCceEEEEEEEEEEec-------CCcEeeeEEeCHHHHhcCCCChHHHHHHHHHHHHHHhh
Confidence 0000 000000011123345655532 12456889999999998888888999998888877654
Q ss_pred C
Q 027463 173 R 173 (223)
Q Consensus 173 ~ 173 (223)
.
T Consensus 140 g 140 (156)
T 1k2e_A 140 G 140 (156)
T ss_dssp H
T ss_pred c
Confidence 3
No 24
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.79 E-value=1.8e-18 Score=133.69 Aligned_cols=111 Identities=20% Similarity=0.165 Sum_probs=84.7
Q ss_pred EEEEEEeCCC----CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEEE
Q 027463 48 LVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 123 (223)
Q Consensus 48 ~VLLv~r~~~----~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~ 123 (223)
+|||++|... +.|.||||+++.||++.+||+||+.||||+.+.... .++.+.+...+. ....++|.
T Consensus 34 ~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~~~~~~~~~~~---------~~~~~~~~ 103 (153)
T 3ees_A 34 KILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGE-LKLACTHSYGDV---------GILILFYE 103 (153)
T ss_dssp EEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCC-EEEEEEEEETTE---------EEEEEEEE
T ss_pred EEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCc-eEEEEEEecCCC---------eEEEEEEE
Confidence 8999998765 679999999999999999999999999999987663 666665544332 12456776
Q ss_pred EEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhh
Q 027463 124 LEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMN 170 (223)
Q Consensus 124 ~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~ 170 (223)
+...... ....+..+++|++++++.++...+.++.++..+...+.
T Consensus 104 ~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 148 (153)
T 3ees_A 104 ILYWKGE--PRAKHHMMLEWIHPEELKHRNIPEANRKILHKIYKALG 148 (153)
T ss_dssp ECEEESC--CCCSSSSEEEEECGGGGGGSCCCHHHHTTHHHHHHHTT
T ss_pred EEECCCC--cCCCccceEEEecHHHhhhCCCCcchHHHHHHHHHhhc
Confidence 6654322 12345678899999999998888888888887766543
No 25
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.79 E-value=8.6e-19 Score=143.90 Aligned_cols=134 Identities=12% Similarity=0.076 Sum_probs=99.6
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEE
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW 99 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~ 99 (223)
.++..+++++++. ++|||+++. .+.|.||||++++|||+.+||+||++||||+.+... ..++.+
T Consensus 68 ~~~~~v~~vv~~~--------------~~vLLvrr~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~l~~~ 131 (206)
T 3o8s_A 68 TPKLDTRAAIFQE--------------DKILLVQEN-DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQ-RVVAIL 131 (206)
T ss_dssp CCEEEEEEEEEET--------------TEEEEEECT-TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEE-EEEEEE
T ss_pred CCCccEEEEEEEC--------------CEEEEEEec-CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceee-eEEEEE
Confidence 5567787888863 279999988 778999999999999999999999999999998766 367776
Q ss_pred EeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhhcCc
Q 027463 100 EFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTERT 174 (223)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~~~~ 174 (223)
.+...... +.......++|.+.+..... .+..|..+++|++++++.++...+..++.+..++..+....+
T Consensus 132 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~E~~~~~w~~~~el~~l~~~~~~~~~l~~~~~~~~~~~~ 201 (206)
T 3o8s_A 132 DKHKNNPA----KSAHRVTKVFILCRLLGGEF-QPNSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASRSEHW 201 (206)
T ss_dssp EHHHHCC---------CEEEEEEEEEEEEECC-CCCSSCSEEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCSSC
T ss_pred eccccCCC----CCCceEEEEEEEEEecCCee-cCCCCceEEEEEeHHHhhhccCCCchHHHHHHHHHHHHCCCC
Confidence 54322211 11123445677776644322 233567789999999999998888889999999887776543
No 26
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.79 E-value=3e-18 Score=138.58 Aligned_cols=127 Identities=21% Similarity=0.313 Sum_probs=95.0
Q ss_pred CCceeEEEEEEEeccCCccccccccCCceEEEEEEeCC---CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCC
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP 95 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~---~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~ 95 (223)
..++.++++|+++ ++ +|||+++.. .+.|.||||++|.|||+.+||+||++||||+.+... ..
T Consensus 37 ~~~~~~v~~ii~~-~~-------------~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~ 101 (189)
T 3cng_A 37 QNPKVIVGCIPEW-EN-------------KVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIR-EL 101 (189)
T ss_dssp CCCEEEEEEEEEE-TT-------------EEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EE
T ss_pred CCCceEEEEEEEe-CC-------------EEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccc-ee
Confidence 4567788888886 22 799999875 467999999999999999999999999999998765 35
Q ss_pred eeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHh-hccCChHHHHHHHHHHHHhhhc
Q 027463 96 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAF-KSCRYDWMIDALKKFLLGMNTE 172 (223)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~-~~l~~~~~~~~l~~~~~~l~~~ 172 (223)
++.+.+.. . ....++|.+...... ..+..|..+++|++++++. ..+.++..+.++..++.....+
T Consensus 102 ~~~~~~~~--~---------~~~~~~f~~~~~~~~-~~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~~~~~~ 167 (189)
T 3cng_A 102 YAVYSLPH--I---------SQVYMLFRAKLLDLD-FFPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYMEERHHG 167 (189)
T ss_dssp EEEEEEGG--G---------TEEEEEEEEEECCSC-CCCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHHHHHHS
T ss_pred EEEEecCC--C---------cEEEEEEEEEeCCCc-cCCCccceeEEEECHHHcCcccccChHHHHHHHHHHHhccCC
Confidence 55555432 1 135677777765432 2234566788999999998 5577888888888887665543
No 27
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.79 E-value=2.8e-19 Score=149.13 Aligned_cols=135 Identities=15% Similarity=0.153 Sum_probs=93.8
Q ss_pred CCceeEEEEEEEeccCCccccccccCCceEEEEEEeCC---CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCC
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP 95 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~---~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~ 95 (223)
..++..++||++..++ +.++|||++|.. .+.|.+|||++++|||+.+||+||++||||+.+.... .
T Consensus 10 ~~p~v~v~~vi~~~~~----------~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~-~ 78 (226)
T 2fb1_A 10 PTFYLGIDCIIFGFNE----------GEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYME-Q 78 (226)
T ss_dssp CCEEEEEEEEEEEEET----------TEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEE-E
T ss_pred CCCeEEEEEEEEEEeC----------CCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceE-E
Confidence 3667889999997643 357999999875 3679999999999999999999999999999976552 5
Q ss_pred eeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhhcC
Q 027463 96 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNTER 173 (223)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~~~ 173 (223)
++.+.+...... ......+|.+.+..........+..+++|++++++.++... ...++..++.++..+.
T Consensus 79 l~~~~~~~r~~~-------~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~l~~d--h~~il~~a~~rlr~~~ 147 (226)
T 2fb1_A 79 VGAFGAIDRDPG-------ERVVSIAYYALININEYDRELVQKHNAYWVNINELPALIFD--HPEMVDKAREMMKQKA 147 (226)
T ss_dssp EEEECCTTSSSS-------SCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCCBSTT--HHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCcCCC-------ceEEEEEEEEEecCcccccCCccccceEEEEHHHhhhccCC--HHHHHHHHHHHHHhhc
Confidence 666543221111 12344566666554322112345578899999999875543 4566777766666543
No 28
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.78 E-value=1.3e-18 Score=137.77 Aligned_cols=123 Identities=20% Similarity=0.148 Sum_probs=85.8
Q ss_pred CCceeEEEEEEEeccCCccccccccCCceEEEEEEeCC-CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCee
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~-~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~ 97 (223)
...+..+++|+++. ++|||++|.. .+.|.||||++++|||+.+||+||++||||+.+... ..++
T Consensus 20 ~~~~~~v~~ii~~~--------------~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~ 84 (171)
T 3id9_A 20 NIMQVRVTGILIED--------------EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIK-KLLY 84 (171)
T ss_dssp --CEEEEEEEEEET--------------TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEEE
T ss_pred CceEEEEEEEEEEC--------------CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccc-eEEE
Confidence 35677777777763 2799999876 578999999999999999999999999999998766 3666
Q ss_pred EEEeeccCCCccCCCCCCceEEEEEEEEeccc-ccC----CCCcCcceeEEEeHHHHhhccCChHHHHHHHHH
Q 027463 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEE-LES----WPEQANYKRIWLSVEEAFKSCRYDWMIDALKKF 165 (223)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~-~~~----~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~ 165 (223)
.+.+..... ....++|.+..... ... ....|..+++|++++++.++...+.++.++...
T Consensus 85 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~l~~~ 148 (171)
T 3id9_A 85 VCDKPDASP---------SLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSETFINLISGG 148 (171)
T ss_dssp EEEETTSSS---------CEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTTCSHHHHHG
T ss_pred EEcccCCCC---------cEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHHHHHHHHHh
Confidence 665543221 12344555554332 111 122456788999999999988777777776665
No 29
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.78 E-value=2.9e-18 Score=133.72 Aligned_cols=130 Identities=18% Similarity=0.138 Sum_probs=87.3
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCC---CCCeecCCcccCCCCCHHHHHHHHHHHHhCceee--ecCC
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGL--LDEN 94 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~---~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~--~~~~ 94 (223)
.++.++++|+++.+ ++|||++|.. .+.|.||||++++|||+.+||+||++||||+.+. .. .
T Consensus 16 ~~~~~v~~vi~~~~-------------~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~ 81 (160)
T 1rya_A 16 TPLVSLDFIVENSR-------------GEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAG-Q 81 (160)
T ss_dssp SCEEEEEEEEECTT-------------SCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGS-E
T ss_pred CcEEEEEEEEEcCC-------------CEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccc-e
Confidence 56678888888643 3799999876 4679999999999999999999999999999864 22 3
Q ss_pred CeeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhc-cCChHHHHHHHH
Q 027463 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKS-CRYDWMIDALKK 164 (223)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~-l~~~~~~~~l~~ 164 (223)
+++.+.+......... ........++|.+.+..........+..+++|++++++.++ ...+..+.++..
T Consensus 82 ~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~ 151 (160)
T 1rya_A 82 FYGVWQHFYDDNFSGT-DFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLA 151 (160)
T ss_dssp EEEEEEEEESSBTTBS-SSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHCTTBCHHHHGGGCH
T ss_pred EEEEEeEEEcccccCC-CcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhccccCHHHHHHHHH
Confidence 6666654332211000 00113456777777654322223446678899999999986 345555555543
No 30
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.78 E-value=1.5e-18 Score=140.55 Aligned_cols=127 Identities=20% Similarity=0.162 Sum_probs=89.4
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEe
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEF 101 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~ 101 (223)
..+++||+++. ++|||++++..+.|.+|||++|+|||+.+||+||++||||+.+... .+++.+.+
T Consensus 4 ~~v~~~vi~~~--------------~~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~~~~ 68 (188)
T 3fk9_A 4 QRVTNCIVVDH--------------DQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNP-ELKGIFSM 68 (188)
T ss_dssp CEEEEEEEEET--------------TEEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSC-EEEEEEEE
T ss_pred eEEEEEEEEEC--------------CEEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCc-eEEEEEEE
Confidence 44566777653 2799999988889999999999999999999999999999998765 36677665
Q ss_pred eccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHH
Q 027463 102 RSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLG 168 (223)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~ 168 (223)
........ ......++|.+...... ..+..+..+++|++++++.++...+..+.++..++..
T Consensus 69 ~~~~~~~~----~~~~~~~~f~a~~~~~~-~~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~~l~~ 130 (188)
T 3fk9_A 69 VIFDEGKI----VSEWMLFTFKATEHEGE-MLKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLHS 130 (188)
T ss_dssp EEEETTEE----EEEEEEEEEEESCEESC-CCSEETTEEEEEEEGGGGGGSCCCHHHHHHHHHHTTC
T ss_pred EecCCCcc----eEEEEEEEEEEECCCCC-CcCCCCCEeEEEEEHHHhhhCCCCHHHHHHHHHHHcC
Confidence 44322110 00114556655433221 1133345688999999999988888887777776543
No 31
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.78 E-value=9.4e-19 Score=142.69 Aligned_cols=114 Identities=39% Similarity=0.646 Sum_probs=81.8
Q ss_pred CCceeEEEEEEEeccCCccccccccCCceEEEEEEeCC-CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCee
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~-~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~ 97 (223)
..++..+++|+++.+. .++|||+++.. .+.|.||||++|+|||+++||+||++||||+++... ..++
T Consensus 37 ~~~~~~~~~vi~~~~~-----------~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~-~~l~ 104 (194)
T 2fvv_A 37 DGYKKRAACLCFRSES-----------EEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLG-RLVG 104 (194)
T ss_dssp TSCEEEEEEEEESSTT-----------CCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE-EEEE
T ss_pred CCccccEEEEEEEECC-----------CCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccc-eEEE
Confidence 3667778888886543 35899999865 468999999999999999999999999999998766 3677
Q ss_pred EEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCc--CcceeEEEeHHHHhhccCC
Q 027463 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQ--ANYKRIWLSVEEAFKSCRY 155 (223)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~--e~~~~~W~~~~e~~~~l~~ 155 (223)
.+.+.. . ....++|.+.+.......+.. +..+++|++++++.+++..
T Consensus 105 ~~~~~~--~---------~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~ 153 (194)
T 2fvv_A 105 IFENQE--R---------KHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQY 153 (194)
T ss_dssp EEEETT--T---------TEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTT
T ss_pred EEEcCC--C---------ceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhc
Confidence 766421 1 123556666554332222211 2257899999999987654
No 32
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.78 E-value=2.1e-18 Score=132.32 Aligned_cols=126 Identities=18% Similarity=0.089 Sum_probs=87.8
Q ss_pred ceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC----CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCC-C
Q 027463 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDEN-P 95 (223)
Q Consensus 21 ~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~----~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~-~ 95 (223)
.+.++++++++.+ ++|||++|... +.|.||||+++.||++.+||+||++||||+.+..... .
T Consensus 7 ~~~~~~~vi~~~~-------------~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~ 73 (144)
T 3r03_A 7 ILLVTAAALIDPD-------------GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAP 73 (144)
T ss_dssp EEEEEEEEEBCTT-------------SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEE
T ss_pred eeEEEEEEEEcCC-------------CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEE
Confidence 3455566666543 37999998754 6799999999999999999999999999999765521 2
Q ss_pred eeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhh
Q 027463 96 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMN 170 (223)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~ 170 (223)
++.+.+..... ....++|.+....... ...+..+++|++++++.++...+.++.++..+.+...
T Consensus 74 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 137 (144)
T 3r03_A 74 LAFASHSYDTF---------HLLMPLYACRSWRGRA--TAREGQTLAWVRAERLREYPMPPADLPLIPILQDWLE 137 (144)
T ss_dssp EEEEEEECSSS---------EEEEEEEEECCCBSCC--CCCSSCEEEEECGGGGGGSCCCTTTTTHHHHHHHHC-
T ss_pred EEeeeccCCCe---------EEEEEEEEEEecCCcc--CCCCcceEEEEeHHHhccCCCCcchHHHHHHHhCccc
Confidence 23333332211 2456777776544321 2345568899999999998888888888877665443
No 33
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.78 E-value=7.5e-18 Score=133.39 Aligned_cols=136 Identities=18% Similarity=0.166 Sum_probs=89.1
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEE
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW 99 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~ 99 (223)
..|.++++++++.+ ++|||+++...+.|.+|||+++.|||+.+||+||++||||+.+... ..++.+
T Consensus 6 ~~~~~v~~~i~~~~-------------~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~-~~~~~~ 71 (164)
T 2kdv_A 6 GYRPNVGIVICNRQ-------------GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDV-RILAST 71 (164)
T ss_dssp SEEEEEEEEEECTT-------------SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGE-EEEEEC
T ss_pred CCCcEEEEEEEccC-------------CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccce-EEEEEe
Confidence 56888888888654 2799999987788999999999999999999999999999987654 245543
Q ss_pred ----EeeccCCCccC--CCCCCceEEEEEEEEecccc---cCC--CCcCcceeEEEeHHHHhhccC---ChHHHHHHHHH
Q 027463 100 ----EFRSKSRMNSC--NSKEGGCRGYMFALEVTEEL---ESW--PEQANYKRIWLSVEEAFKSCR---YDWMIDALKKF 165 (223)
Q Consensus 100 ----~~~~~~~~~~~--~~~~~~~~~~~f~~~v~~~~---~~~--~~~e~~~~~W~~~~e~~~~l~---~~~~~~~l~~~ 165 (223)
.|..+...... .+.......++|.+.+.... ... +..|..+++|++++++.+.+. .+.+..++..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l 151 (164)
T 2kdv_A 72 RNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEF 151 (164)
T ss_dssp SSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHH
T ss_pred cceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHH
Confidence 23322211100 01112235678888765421 111 234667889999999876543 24444445444
Q ss_pred HHHh
Q 027463 166 LLGM 169 (223)
Q Consensus 166 ~~~l 169 (223)
...+
T Consensus 152 ~~~l 155 (164)
T 2kdv_A 152 ASVV 155 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 34
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.78 E-value=2.1e-18 Score=135.80 Aligned_cols=126 Identities=22% Similarity=0.193 Sum_probs=91.0
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC---CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCe
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR---DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 96 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~---~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l 96 (223)
..+.++++++++.+ .++|||++|... +.|.||||++++|||+.+||+||++||||+.+... ..+
T Consensus 8 ~~~~~v~~vi~~~~------------~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~ 74 (161)
T 3exq_A 8 PVELVTMVMVTDPE------------TQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGV-TFC 74 (161)
T ss_dssp CEEEEEEEEEBCTT------------TCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCC-EEE
T ss_pred CceEEEEEEEEeCC------------CCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCC-cEE
Confidence 45667777776643 247999988743 45889999999999999999999999999998766 367
Q ss_pred eEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHH
Q 027463 97 GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLL 167 (223)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~ 167 (223)
+.+.+...... .....++|.+...... ....+..+++|++++++.++...+..+.++..++.
T Consensus 75 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 136 (161)
T 3exq_A 75 GTCEWFDDDRQ-------HRKLGLLYRASNFTGT--LKASAEGQLSWLPITALTRENSAASLPEFLQVFTG 136 (161)
T ss_dssp EEEEEECSSCS-------SEEEEEEEEECCEESC--CCGGGTTTEEEECGGGCCTTTBCTTHHHHHHHHTT
T ss_pred EEEecccCCCC-------eEEEEEEEEEeccCCc--cCCCccceEEEeeHHHhhhCccChHHHHHHHHHhh
Confidence 77765542221 1235566666543321 12335567999999999998777888888877765
No 35
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.78 E-value=7.7e-18 Score=128.35 Aligned_cols=109 Identities=20% Similarity=0.188 Sum_probs=81.8
Q ss_pred EEEEEEeCCC----CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEEE
Q 027463 48 LVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 123 (223)
Q Consensus 48 ~VLLv~r~~~----~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~ 123 (223)
+|||++++.. +.|.||||+++.|||+.+||+||++||||+.+... ..++.+.+..... ....++|.
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~~~~~~---------~~~~~~~~ 90 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVG-EYVASHQREVSGR---------IIHLHAWH 90 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECC-EEEEEEEEEETTE---------EEEEEEEE
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecc-cEEEEEEEecCCc---------EEEEEEEE
Confidence 7999998653 67999999999999999999999999999998765 3667665544322 13456676
Q ss_pred EEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHH
Q 027463 124 LEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLG 168 (223)
Q Consensus 124 ~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~ 168 (223)
+....... ...+..+++|++++++.++...+.++.++..+...
T Consensus 91 ~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 133 (140)
T 2rrk_A 91 VPDFHGTL--QAHEHQALVWCSPEEALQYPLAPADIPLLEAFMAL 133 (140)
T ss_dssp ESEEEECC--CCSSCSCEEEECHHHHTTSCCCTTHHHHHHHHHHH
T ss_pred EEeeCCCc--CCCccceeEEeCHHHHhhCCCChhHHHHHHHHHHH
Confidence 65443211 23355678999999999988888888888777654
No 36
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.77 E-value=2.4e-18 Score=137.75 Aligned_cols=110 Identities=15% Similarity=0.081 Sum_probs=80.8
Q ss_pred EEEEEEeCC---CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEEEE
Q 027463 48 LVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFAL 124 (223)
Q Consensus 48 ~VLLv~r~~---~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 124 (223)
+|||++|.. .+.|.||||++|+|||+.+||+||++||||+.+... .+++.+.+...... .....++|.+
T Consensus 37 ~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~l~~~~~~~~~~~-------~~~~~~~f~~ 108 (176)
T 3q93_A 37 RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDAL-HKVGQIVFEFVGEP-------ELMDVHVFCT 108 (176)
T ss_dssp EEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCC-EEEEEEEEEETTCS-------CEEEEEEEEE
T ss_pred EEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceee-EEEEEEEEEcCCCC-------cEEEEEEEEE
Confidence 899998865 367999999999999999999999999999998765 37777766544321 1234567766
Q ss_pred EecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHH
Q 027463 125 EVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLL 167 (223)
Q Consensus 125 ~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~ 167 (223)
....... ...+..+.+|++++++.+....+..+.++..++.
T Consensus 109 ~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 149 (176)
T 3q93_A 109 DSIQGTP--VESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQ 149 (176)
T ss_dssp SCEESCC--CCCSSEEEEEEETTCCCGGGBCTTHHHHHHHHHT
T ss_pred ECCCCCc--CCCcceeeEEeeHHHccccccCcchHHHHHHHHc
Confidence 5432211 2234567799999999988777777777766653
No 37
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.77 E-value=4e-18 Score=132.84 Aligned_cols=114 Identities=20% Similarity=0.087 Sum_probs=81.7
Q ss_pred ceeEEEEEEEeccCCccccccccCCceEEEEEEeCC-------CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecC
Q 027463 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-------RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE 93 (223)
Q Consensus 21 ~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~-------~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~ 93 (223)
.+.++++|+++.+ ++|||+++.. .+.|.||||+++.|||+.+||+||++||||+.+...
T Consensus 12 ~~~~~~~vi~~~~-------------~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~- 77 (159)
T 1sjy_A 12 ELRAAGVVLLNER-------------GDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPV- 77 (159)
T ss_dssp CEEEEEEEEBCTT-------------CCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEE-
T ss_pred EEEeEEEEEEeCC-------------CCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceee-
Confidence 3556666666543 3799999874 367999999999999999999999999999998766
Q ss_pred CCeeEEEeeccCCCccCCCCCCceEEEEEEEEecccc-cCC-CCcCcceeEEEeHHHHhhccCCh
Q 027463 94 NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL-ESW-PEQANYKRIWLSVEEAFKSCRYD 156 (223)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~-~~~-~~~e~~~~~W~~~~e~~~~l~~~ 156 (223)
..++.+.+..... .....++|.+.+.... ... ...|..+++|++++++.+++...
T Consensus 78 ~~l~~~~~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 78 KFLGAYLGRFPDG--------VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp EEEEEEEEECTTS--------CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred EEEEEEecccCCC--------ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 3677665432211 1346778877765432 221 34456788999999998876443
No 38
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.77 E-value=1.3e-18 Score=135.78 Aligned_cols=99 Identities=22% Similarity=0.200 Sum_probs=65.3
Q ss_pred eEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEE-----eeccCCCccCCCCCCceEEEE
Q 027463 47 VLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWE-----FRSKSRMNSCNSKEGGCRGYM 121 (223)
Q Consensus 47 ~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~ 121 (223)
++|||++|. .+.|.||||++++|||+.+||+||++||||+.+.... .++.+. +..... .......++
T Consensus 33 ~~vLL~~r~-~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~ 104 (153)
T 3eds_A 33 GEILFQYPG-GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKK-QKGVFGGKEYRYTYSNG------DEVEYIVVV 104 (153)
T ss_dssp CCEEEECC----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEE-EEEEECSGGGEEECTTS------CEEEEEEEE
T ss_pred CeEEEEEcC-CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeee-EEEEecccceeeecCCC------CeEEEEEEE
Confidence 378988877 7789999999999999999999999999999987663 666552 221111 111234667
Q ss_pred EEEEecccccCCCCcCcceeEEEeHHHHhhcc
Q 027463 122 FALEVTEELESWPEQANYKRIWLSVEEAFKSC 153 (223)
Q Consensus 122 f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l 153 (223)
|.+.+.........+|..+++|++++++.++.
T Consensus 105 f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l~ 136 (153)
T 3eds_A 105 FECEVTSGELRSIDGESLKLQYFSLSEKPPLA 136 (153)
T ss_dssp EEEEEEEECCC-------CEEEECGGGCCCBS
T ss_pred EEEEecCCccccCCCcEEEEEEECHHHCchhc
Confidence 77766543222234466789999999998874
No 39
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.76 E-value=1.7e-17 Score=132.39 Aligned_cols=113 Identities=24% Similarity=0.270 Sum_probs=78.9
Q ss_pred EEEEEEeCCC-----CCeec-CCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEE
Q 027463 48 LVLMISTPNR-----DDLVF-PKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYM 121 (223)
Q Consensus 48 ~VLLv~r~~~-----~~W~l-PGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (223)
+|||++|... |.|.| |||+++.|||+.+||+||++||||+.+... ..++.+.+..... ....++
T Consensus 50 ~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~l~~~~~~~~~~---------~~~~~~ 119 (180)
T 2fkb_A 50 KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPF-AEHGQFYFEDKNC---------RVWGAL 119 (180)
T ss_dssp CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCC-EEEEEEEEEETTE---------EEEEEE
T ss_pred EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccce-EEEEEEEecCCCc---------eEEEEE
Confidence 6898888542 46999 999999999999999999999999986544 2566665543221 234567
Q ss_pred EEEEecccccCCCCcCcceeEEEeHHHHhhcc--CChHHHHHHHHHHHHhhh
Q 027463 122 FALEVTEELESWPEQANYKRIWLSVEEAFKSC--RYDWMIDALKKFLLGMNT 171 (223)
Q Consensus 122 f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l--~~~~~~~~l~~~~~~l~~ 171 (223)
|.+....... ....+..+++|++++++.+++ ..+..+.++..++.....
T Consensus 120 f~~~~~~~~~-~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~~~~~~ 170 (180)
T 2fkb_A 120 FSCVSHGPFA-LQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNAK 170 (180)
T ss_dssp EEEECCCCCC-CCTTTEEEEEEECHHHHHTTGGGBCHHHHHHHHHHHHHC--
T ss_pred EEEecCCCcC-CChhHhheEEEecHHHHHHHHHHhCCcHHHHHHHHHHhhcC
Confidence 7766443322 134466788999999999874 346667777766654433
No 40
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.76 E-value=1.1e-17 Score=131.57 Aligned_cols=112 Identities=17% Similarity=0.023 Sum_probs=73.6
Q ss_pred EEEEEEeCCC-----CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEE------EeeccCCCccCCCCCCc
Q 027463 48 LVLMISTPNR-----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW------EFRSKSRMNSCNSKEGG 116 (223)
Q Consensus 48 ~VLLv~r~~~-----~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~ 116 (223)
+|||++|... +.|.||||+++.|||+.+||+||++||||+.+.... .++.. .+....... ....
T Consensus 40 ~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~ 114 (165)
T 3oga_A 40 CYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSD-ITPWTFRDDIRIKTYADGRQ----EEIY 114 (165)
T ss_dssp EEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEE-EEEEEEEEEEEEEEC--CCE----EEEE
T ss_pred EEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccc-eeeeeeecceeeEecCCCCc----eeEE
Confidence 8999988743 569999999999999999999999999999976552 22211 111111110 0001
Q ss_pred eEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHH
Q 027463 117 CRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKF 165 (223)
Q Consensus 117 ~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~ 165 (223)
...++|.+....... ...+|..+++|++++++.++...+..+.++..+
T Consensus 115 ~~~~~~~~~~~~~~~-~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~ 162 (165)
T 3oga_A 115 MIYLIFDCVSANRDI-CINDEFQDYAWVKPEELALYDLNVATRHTLALK 162 (165)
T ss_dssp EEEEEEEEEESCCCC-CCCTTEEEEEEECGGGGGGSCBCHHHHHHHHHT
T ss_pred EEEEEEEeeccCCCc-cCCchheeeEEccHHHHhhCCCCHHHHHHHHHh
Confidence 223445444433222 133466788999999999988888777777654
No 41
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.76 E-value=2.5e-17 Score=134.17 Aligned_cols=121 Identities=14% Similarity=0.249 Sum_probs=77.9
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCC--CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCee
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN--RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~--~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~ 97 (223)
..+..+++++++.++ .+|||++++. .+.|.||||++++|||+.+||+||++||||+.+... ..++
T Consensus 24 ~~~v~v~~~v~~~~~------------~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~-~l~~ 90 (199)
T 3h95_A 24 SHQVGVAGAVFDEST------------RKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFR-SVLS 90 (199)
T ss_dssp --CCEEEEEEEETTT------------TEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEEE
T ss_pred cccceEEEEEEeCCC------------CEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccc-eEEE
Confidence 445666777776542 4899999876 478999999999999999999999999999998755 2444
Q ss_pred EEE-eeccCCCccCCCCCCceEEEEEEEEeccc-cc-CCCCcCcceeEEEeHHHHhhccCChHHHHH
Q 027463 98 EWE-FRSKSRMNSCNSKEGGCRGYMFALEVTEE-LE-SWPEQANYKRIWLSVEEAFKSCRYDWMIDA 161 (223)
Q Consensus 98 ~~~-~~~~~~~~~~~~~~~~~~~~~f~~~v~~~-~~-~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~ 161 (223)
... +..++.. .....+|.+.+... .. .....|..+++|++++++.++.....+...
T Consensus 91 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~ 149 (199)
T 3h95_A 91 IRQQHTNPGAF--------GKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSR 149 (199)
T ss_dssp EEECC-----------------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCSSBCHHHHH
T ss_pred EEeeecCCCCc--------eeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhhhcChHHHH
Confidence 322 2222111 11233444444321 11 223446678899999999987655444433
No 42
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.75 E-value=7.9e-18 Score=130.26 Aligned_cols=109 Identities=22% Similarity=0.203 Sum_probs=68.9
Q ss_pred eEEEEEEEeccCCccccccccCCceEEEEEEeCCC----CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeE
Q 027463 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGE 98 (223)
Q Consensus 23 ~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~----~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~ 98 (223)
.++++|+++.+ ++|||++++.. +.|.||||++|+|||+.+||+||++||||+.+.... .++.
T Consensus 6 ~~v~vi~~~~~-------------~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~-~l~~ 71 (145)
T 2w4e_A 6 RAVFILPVTAQ-------------GEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWV-PLPG 71 (145)
T ss_dssp EEEEEEEEETT-------------SEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEE-ECCC
T ss_pred CEEEEEEEcCC-------------CEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEE-EEec
Confidence 46677777643 27888876432 259999999999999999999999999999875442 4443
Q ss_pred EEeeccCCCccCCCCCCceEEEEEEEE-ecccccCCCCcCcceeEEEeHHHHhhccC
Q 027463 99 WEFRSKSRMNSCNSKEGGCRGYMFALE-VTEELESWPEQANYKRIWLSVEEAFKSCR 154 (223)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~f~~~-v~~~~~~~~~~e~~~~~W~~~~e~~~~l~ 154 (223)
+ +...... ....++|.+. .........+.|..+++|++++++.+++.
T Consensus 72 ~-~~~~~~~--------~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 119 (145)
T 2w4e_A 72 F-YPQPSIS--------GVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLE 119 (145)
T ss_dssp B-BSCTTTC--------CCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHH
T ss_pred C-cCCCCcc--------CceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHH
Confidence 2 1111111 1234566554 32221112344667889999999987753
No 43
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.75 E-value=1.5e-17 Score=142.34 Aligned_cols=145 Identities=16% Similarity=0.140 Sum_probs=96.7
Q ss_pred CCceeEEEEEEEeccCCccccccccCCceEEEEEEeCC---CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCC
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP 95 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~---~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~ 95 (223)
..+...+++|++..+.. .+.++|||++|.. .+.|.||||++++|||+.+||+||++||||+.+.... .
T Consensus 36 ~~p~v~v~~vv~~~~~~--------~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~-l 106 (273)
T 2fml_A 36 EKPSLTVDMVLLCYNKE--------ADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQEN-I 106 (273)
T ss_dssp CCCEEEEEEEEEEEETT--------TTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGG-E
T ss_pred CCCceEEEEEEEEEcCC--------CCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCc-E
Confidence 46788999999987531 0257999999975 3679999999999999999999999999998765431 2
Q ss_pred eeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhcc----------------------
Q 027463 96 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC---------------------- 153 (223)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l---------------------- 153 (223)
.....|....... .......+|.+.+.... ..+.++..+++|++++++.+.+
T Consensus 107 ~~l~~~~~~~r~~-----~~~~~~~~y~a~~~~~~-~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~ 180 (273)
T 2fml_A 107 EQLHSFSRPDRDP-----RGWVVTVSYLAFIGEEP-LIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKD 180 (273)
T ss_dssp EEEEEECCTTSST-----TSSEEEEEEEEECCCCC-CCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSSS
T ss_pred EEEEEEcCCCCCC-----CceEEEEEEEEEeCCCC-CCCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCCC
Confidence 2222333222211 12345667777665433 2344566788999999864432
Q ss_pred -CChHHHHHHHHHHHHhhhcCccccc
Q 027463 154 -RYDWMIDALKKFLLGMNTERTQLCK 178 (223)
Q Consensus 154 -~~~~~~~~l~~~~~~l~~~~~~~~~ 178 (223)
..-++..++..++.++..+......
T Consensus 181 ~LafdH~~Il~~al~rlr~kl~y~~i 206 (273)
T 2fml_A 181 TLAFDHSEIIIKAFNRVVDKMEHEPQ 206 (273)
T ss_dssp CCSTTHHHHHHHHHHHHHHHTTTCCG
T ss_pred cccccHHHHHHHHHHHHHHHhcCCcH
Confidence 1234566788888887776544433
No 44
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.75 E-value=3.3e-18 Score=133.06 Aligned_cols=115 Identities=13% Similarity=0.096 Sum_probs=79.7
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEE
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW 99 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~ 99 (223)
.++..+++|+++. ++|||+++ .+.|.||||++++|||+.+||+||++||||+.+... ..++.+
T Consensus 17 ~~~~~~~~ii~~~--------------~~vLl~~r--~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~~~~ 79 (154)
T 2pqv_A 17 VFGVRATALIVQN--------------HKLLVTKD--KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAG-QLAFVV 79 (154)
T ss_dssp EEEEEEEECCEET--------------TEEEEEEE--TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEE-EEEEEE
T ss_pred eEeEEEEEEEEEC--------------CEEEEEec--CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeec-eEEEEE
Confidence 4567777777753 27999988 678999999999999999999999999999998766 355555
Q ss_pred EeeccCCCccCCCCCCceEEEEEEEEecccccC--CCCcCcceeEEEeHHHHhhccCCh
Q 027463 100 EFRSKSRMNSCNSKEGGCRGYMFALEVTEELES--WPEQANYKRIWLSVEEAFKSCRYD 156 (223)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~--~~~~e~~~~~W~~~~e~~~~l~~~ 156 (223)
.+....... ......++|.+........ .++++..+++|++++++.++...+
T Consensus 80 ~~~~~~~~~-----~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~ 133 (154)
T 2pqv_A 80 ENRFEVDGV-----SYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNIQLVP 133 (154)
T ss_dssp EEEEEETTE-----EEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGSCEES
T ss_pred eeeecCCCC-----cceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhcCcCc
Confidence 433221111 1123456777776543221 123345678999999999864433
No 45
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.75 E-value=1.1e-17 Score=132.68 Aligned_cols=106 Identities=17% Similarity=0.036 Sum_probs=74.6
Q ss_pred EEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEEEEEec
Q 027463 48 LVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVT 127 (223)
Q Consensus 48 ~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~ 127 (223)
+|||++++ .+.|.||||++++|||+.+||+||++||||+.+.... .++.+.+.. ...++|.+.+.
T Consensus 28 ~vLL~~r~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l~~~~~~~-------------~~~~~f~~~~~ 92 (163)
T 3f13_A 28 GVLVTASR-GGRYNLPGGKANRGELRSQALIREIREETGLRINSML-YLFDHITPF-------------NAHKVYLCIAQ 92 (163)
T ss_dssp EEEEEECC----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEE-EEEEEECSS-------------EEEEEEEEEC-
T ss_pred EEEEEEEC-CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeE-EEEEEecCC-------------eEEEEEEEEEC
Confidence 68999876 5789999999999999999999999999999977653 555544322 24566766665
Q ss_pred ccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhhh
Q 027463 128 EELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMNT 171 (223)
Q Consensus 128 ~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~~ 171 (223)
+... +.+|..+++|++ .+.......+..+.++..+......
T Consensus 93 ~~~~--~~~E~~~~~W~~-~~~~~~~l~~~~~~il~~~~~~~~~ 133 (163)
T 3f13_A 93 GQPK--PQNEIERIALVS-SPDTDMDLFVEGRAILRRYARLRNE 133 (163)
T ss_dssp CCCC--CCTTCCEEEEES-STTCSSCBCHHHHHHHHHHHHHTTC
T ss_pred CcCc--cCCCceEEEEEC-cccccCCCCHHHHHHHHHHHHhhhc
Confidence 4433 344667899999 4445545557777888777665443
No 46
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.75 E-value=3e-17 Score=127.57 Aligned_cols=126 Identities=17% Similarity=0.175 Sum_probs=86.2
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCC--CeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCee
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRD--DLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~--~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~ 97 (223)
..+.++++|+++.++ +...|||++|...+ .|.||||++++|||+.+||+||++||||+.+... ..++
T Consensus 6 ~~~~~~~~ii~~~~~----------~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~ 74 (155)
T 2b06_A 6 LTILTNICLIEDLET----------QRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNP-QLVG 74 (155)
T ss_dssp CEEEEEEEEEEETTT----------TEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESC-EEEE
T ss_pred CcEEEEEEEEEECCC----------CeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCC-cEEE
Confidence 456778888877432 23447877775432 3799999999999999999999999999998765 3667
Q ss_pred EEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHH
Q 027463 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFL 166 (223)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~ 166 (223)
.+.+..... .....++|.+....... ...+..+++|++++++.++...+.++.++..+.
T Consensus 75 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 133 (155)
T 2b06_A 75 IKNWPLDTG--------GRYIVICYKATEFSGTL--QSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMME 133 (155)
T ss_dssp EEEEECTTS--------CEEEEEEEEECEEEECC--CCBTTBEEEEEEGGGGGGSCBCTTHHHHHHHHH
T ss_pred EEeeccCCC--------ceEEEEEEEEEecCCCC--CCCcceeeEEeeHHHhhhCCCChhHHHHHHHHh
Confidence 666543211 12356677665433211 224567889999999999877777777776554
No 47
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.4e-17 Score=128.27 Aligned_cols=110 Identities=19% Similarity=0.212 Sum_probs=73.5
Q ss_pred EEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeec
Q 027463 24 VAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRS 103 (223)
Q Consensus 24 ~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~ 103 (223)
++++++++.+ .++|||+++...+.|.||||++++|||+.+||+||++||||+.+.... .+..+....
T Consensus 6 ~~~~~i~~~~------------~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~-~~~~~~~~~ 72 (146)
T 2jvb_A 6 VRGAAIFNEN------------LSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYI-DDNQFIERN 72 (146)
T ss_dssp CEEEEEBCTT------------SSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSS-CSSCEEEEE
T ss_pred EEEEEEEeCC------------CCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhc-ccccccccc
Confidence 4667777653 248999998877889999999999999999999999999999876431 233332211
Q ss_pred cCCCccCCCCCCceEEEEEEEE-eccc--ccCCCCcCcceeEEEeHHHHhhccCCh
Q 027463 104 KSRMNSCNSKEGGCRGYMFALE-VTEE--LESWPEQANYKRIWLSVEEAFKSCRYD 156 (223)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~f~~~-v~~~--~~~~~~~e~~~~~W~~~~e~~~~l~~~ 156 (223)
.. . ....+|.+. .... ....+..|..+++|++++++.+++...
T Consensus 73 ~~--~--------~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 118 (146)
T 2jvb_A 73 IQ--G--------KNYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKS 118 (146)
T ss_dssp ET--T--------EEEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCS
T ss_pred cC--C--------ceEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhccc
Confidence 11 0 122333332 2221 122234566789999999999886543
No 48
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.73 E-value=1.5e-17 Score=130.02 Aligned_cols=137 Identities=20% Similarity=0.195 Sum_probs=84.3
Q ss_pred CCceeEEEEEEEeccCCccccccccCCceEEEEEEeCC-CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCC--
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENP-- 95 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~-~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~-- 95 (223)
..+|.++++++++.+ ++|||++|.. .+.|.+|||++++|||+.+||+||++||||+.+......
T Consensus 11 ~~~~~~v~~~i~~~~-------------~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~ 77 (165)
T 1f3y_A 11 EGYRRNVGICLMNND-------------KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVP 77 (165)
T ss_dssp SSCCCEEEEEEECTT-------------SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECS
T ss_pred cceeeeEEEEEECCC-------------CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccc
Confidence 456888888888643 3799999875 367999999999999999999999999999985421000
Q ss_pred -eeEEEeeccCC----CccCCCCCCceEEEEEEEEecccc-cCC------CCcCcceeEEEeHHHHhhccCChHHHHHHH
Q 027463 96 -LGEWEFRSKSR----MNSCNSKEGGCRGYMFALEVTEEL-ESW------PEQANYKRIWLSVEEAFKSCRYDWMIDALK 163 (223)
Q Consensus 96 -l~~~~~~~~~~----~~~~~~~~~~~~~~~f~~~v~~~~-~~~------~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~ 163 (223)
...+.|..... .... ........++|.+.+.... ... +..|..+++|++++++.+++.. .....+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~-~~~~~~~ 155 (165)
T 1f3y_A 78 YWLTYDFPPKVREKLNIQWG-SDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVE-FKKPVYK 155 (165)
T ss_dssp SCCBCCCCHHHHHHHGGGSC-SSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCG-GGHHHHH
T ss_pred cceeeecCcccccccccccc-ccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhh-hhHHHHH
Confidence 01111111000 0000 0001123566777665421 111 2346678899999999998753 2344555
Q ss_pred HHHHHhh
Q 027463 164 KFLLGMN 170 (223)
Q Consensus 164 ~~~~~l~ 170 (223)
+++..+.
T Consensus 156 ~~~~~l~ 162 (165)
T 1f3y_A 156 EVLSVFA 162 (165)
T ss_dssp HHHHHHG
T ss_pred HHHHHhh
Confidence 5555443
No 49
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.73 E-value=1.8e-17 Score=133.85 Aligned_cols=130 Identities=14% Similarity=0.101 Sum_probs=85.0
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCC-----CCCeec-CCcccCCCCCHHHHHHHHHHHHhCceeeecCCC
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVF-PKGGWEDDETVSEAACREALEEAGVRGLLDENP 95 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~-----~~~W~l-PGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~ 95 (223)
+.++++++++.+ ++|||++|.. .+.|.+ |||+++.|||+.+||+||++||||+.+......
T Consensus 32 ~~~v~~~i~~~~-------------g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~ 98 (190)
T 1hzt_A 32 HLAFSSWLFNAK-------------GQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESI 98 (190)
T ss_dssp EECEEEEEECTT-------------CCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEE
T ss_pred EEEEEEEEEcCC-------------CEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhhee
Confidence 346666666533 3799998854 367999 999999999999999999999999987644114
Q ss_pred eeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhcc------CChHHHHHHHHHHHHh
Q 027463 96 LGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC------RYDWMIDALKKFLLGM 169 (223)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l------~~~~~~~~l~~~~~~l 169 (223)
++.+.|...... +.......++|.+.+...... ..+|..+++|++++++.+++ ..++++.++..+..+.
T Consensus 99 ~~~~~~~~~~~~----~~~~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~~~ 173 (190)
T 1hzt_A 99 YPDFRYRATDPS----GIVENEVCPVFAARTTSALQI-NDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREARK 173 (190)
T ss_dssp ETTCEEEEECTT----SCEEEEECCEEEEEBCSCCCC-CTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHHHH
T ss_pred eeeEEEEeeCCC----CCcceEEEEEEEEecCCCCcC-CccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHHHH
Confidence 444444321110 111123456777776543322 34466788999999998764 3455666665555433
No 50
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.72 E-value=7.6e-18 Score=134.89 Aligned_cols=112 Identities=19% Similarity=0.101 Sum_probs=74.7
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCC----CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCee
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~----~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~ 97 (223)
+.++++++++.+ ++|||+++.. .+.|.||||++|+|||+.+||+||++||||+.+.... .++
T Consensus 41 ~~~v~v~i~~~~-------------~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l~ 106 (182)
T 2yvp_A 41 VAASFVLPVTER-------------GTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLI-PLP 106 (182)
T ss_dssp CEEEEEEEBCTT-------------SEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEE-ECC
T ss_pred CCEEEEEEEcCC-------------CEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEE-EEE
Confidence 346666666543 3799998853 3469999999999999999999999999999876442 444
Q ss_pred EEEeeccCCCccCCCCCCceEEEEEEEEecc-cc-cCCCCcCcceeEEEeHHHHhhccCCh
Q 027463 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTE-EL-ESWPEQANYKRIWLSVEEAFKSCRYD 156 (223)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~-~~-~~~~~~e~~~~~W~~~~e~~~~l~~~ 156 (223)
.+.+.. .. .....++|.+.... .. ......|..+++|++++++.+++..+
T Consensus 107 ~~~~~~-~~--------~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 107 SFHPQP-SF--------TAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp CBCSCT-TT--------BCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred EEeCCC-Cc--------cccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 432211 11 12345666665322 11 11234466788999999998876443
No 51
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.72 E-value=3e-18 Score=128.75 Aligned_cols=106 Identities=19% Similarity=0.162 Sum_probs=76.4
Q ss_pred EEEEEEeCCC----CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEEE
Q 027463 48 LVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 123 (223)
Q Consensus 48 ~VLLv~r~~~----~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~ 123 (223)
+|||++|+.. +.|.||||++++|||+.+||+||++||||+.+.... .++.+.+..... ....++|.
T Consensus 17 ~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~ 86 (129)
T 1mut_A 17 EIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFS-LFEKLEYEFPDR---------HITLWFWL 86 (129)
T ss_dssp EEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEEC-CCCCCBCCCSSC---------EEECCCEE
T ss_pred EEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccce-EEEEEEEecCCc---------eEEEEEEE
Confidence 8999998764 679999999999999999999999999999976552 555544332211 12345666
Q ss_pred EEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHH
Q 027463 124 LEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKF 165 (223)
Q Consensus 124 ~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~ 165 (223)
+....... ...+..+++|++++++.++...+.++.++..+
T Consensus 87 ~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~l 126 (129)
T 1mut_A 87 VERWEGEP--WGKEGQPGEWMSLVGLNADDFPPANEPVIAKL 126 (129)
T ss_dssp EEECSSCC--CCCSSCCCEEEESSSCCTTTSCTTCHHHHHHH
T ss_pred EEccCCcc--CCcccceeEEeCHHHcccccCCchhHHHHHHH
Confidence 66543211 23355678999999999887776667766554
No 52
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.72 E-value=5.1e-17 Score=138.93 Aligned_cols=112 Identities=13% Similarity=0.022 Sum_probs=81.7
Q ss_pred EEEEEEeCC--CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEEEEE
Q 027463 48 LVLMISTPN--RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALE 125 (223)
Q Consensus 48 ~VLLv~r~~--~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 125 (223)
+|||+++.. .+.|.+|||++|+|||+++||+||++||||+++... .+++.+.+..+. ..+.+|.+.
T Consensus 152 ~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~-~~~~~~~~~~~~-----------~~~~~f~a~ 219 (269)
T 1vk6_A 152 SILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNL-RYVTSQPWPFPQ-----------SLMTAFMAE 219 (269)
T ss_dssp EEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEE-EEEEEEEEETTE-----------EEEEEEEEE
T ss_pred EEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeE-EEEEEEecCCCC-----------EEEEEEEEE
Confidence 899999875 367999999999999999999999999999998766 367766554321 245667666
Q ss_pred ecccccCCCCcCcceeEEEeHHHHhhccCChHH-HHHHHHHHHHhhh
Q 027463 126 VTEELESWPEQANYKRIWLSVEEAFKSCRYDWM-IDALKKFLLGMNT 171 (223)
Q Consensus 126 v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~-~~~l~~~~~~l~~ 171 (223)
+..........|..+++|++++++..+.....+ +.++..++..+++
T Consensus 220 ~~~~~~~~~~~E~~~~~W~~~~el~~l~~~~si~~~li~~~l~~~r~ 266 (269)
T 1vk6_A 220 YDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRA 266 (269)
T ss_dssp EEECCCCCCTTTEEEEEEEETTSCCSCCCTTSHHHHHHHHHHHHHHH
T ss_pred ECCCCcCCCCcceEEEEEEEHHHhhhcccCcHHHHHHHHHHHHHHHh
Confidence 543222222346678999999999887655443 4566667766654
No 53
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.72 E-value=5.4e-17 Score=128.63 Aligned_cols=110 Identities=21% Similarity=0.183 Sum_probs=72.7
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCC----CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCee
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLG 97 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~----~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~ 97 (223)
+.++++++++ ++ +|||+++.. .+.|.||||++|+|||+.+||+||++||||+ +... .+++
T Consensus 34 ~~~v~vii~~-~~-------------~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~-~~l~ 97 (170)
T 1v8y_A 34 KPAVAVIALR-EG-------------RMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDL-TYLF 97 (170)
T ss_dssp CCEEEEEEEE-TT-------------EEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEE-EEEE
T ss_pred CCeEEEEEEE-CC-------------EEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCc-eeeE
Confidence 3467777777 32 799998753 3569999999999999999999999999999 6655 3566
Q ss_pred EEEeeccCCCccCCCCCCceEEEEEEEEecc-cccCCCCcCcceeEEEeHHHHhhccCCh
Q 027463 98 EWEFRSKSRMNSCNSKEGGCRGYMFALEVTE-ELESWPEQANYKRIWLSVEEAFKSCRYD 156 (223)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~-~~~~~~~~e~~~~~W~~~~e~~~~l~~~ 156 (223)
.+.+.. ... ....++|.+.... ........|..+++|++++++.+++..+
T Consensus 98 ~~~~~~-~~~--------~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 148 (170)
T 1v8y_A 98 SYFVSP-GFT--------DEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRG 148 (170)
T ss_dssp EEESCT-TTB--------CCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHTT
T ss_pred EEecCC-Ccc--------ccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHCC
Confidence 553221 111 1245666665432 2111134466788999999999876443
No 54
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.71 E-value=5.9e-17 Score=141.46 Aligned_cols=129 Identities=17% Similarity=0.208 Sum_probs=84.2
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCC---CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCe
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN---RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 96 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~---~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l 96 (223)
..+.++++|+++. ++|||++++. .+.|.+|||++|+|||+.+||+||++||||+.+.... .+
T Consensus 201 ~~~~~v~~vi~~~--------------~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~ 265 (341)
T 2qjo_A 201 PTFITTDAVVVQA--------------GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPV-LR 265 (341)
T ss_dssp CCEEEEEEEEEET--------------TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHH-HH
T ss_pred CCceEEEEEEEeC--------------CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCcccccc-cc
Confidence 4567788888752 2799999875 4679999999999999999999999999999976542 33
Q ss_pred e----EEEeeccCCCccCCCCCCceEEEEEEEEecccc--cCCCCcCcceeEEEeHHHHhhc--cCChHHHHHHHHHHHH
Q 027463 97 G----EWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL--ESWPEQANYKRIWLSVEEAFKS--CRYDWMIDALKKFLLG 168 (223)
Q Consensus 97 ~----~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~--~~~~~~e~~~~~W~~~~e~~~~--l~~~~~~~~l~~~~~~ 168 (223)
+ ...|..+.... ......++|.+.+.... ...+.+|..+++|++++++.++ ...+..+.++..++..
T Consensus 266 ~~~~~~~~~~~~~~~~-----~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~~~~~ 340 (341)
T 2qjo_A 266 GSIVDSHVFDAPGRSL-----RGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQHFVSK 340 (341)
T ss_dssp HTEEEEEEECCTTSCT-----TSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHHHC--
T ss_pred ccccceEEEeCCCCCC-----CCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHHHHhc
Confidence 2 22333322211 11234556666654322 1123456678999999999986 5667778887776543
No 55
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.70 E-value=8e-17 Score=131.48 Aligned_cols=102 Identities=18% Similarity=0.073 Sum_probs=71.6
Q ss_pred EEEEEEeCCC----CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEEE
Q 027463 48 LVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFA 123 (223)
Q Consensus 48 ~VLLv~r~~~----~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~ 123 (223)
+|||+++... +.|.||||++|+|||+.+||+||++||||+.+... ..++.+.+.. ... ....++|.
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~-~~l~~~~~~~-~~~--------~~~~~~f~ 130 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDL-TFLKKLSMAP-SYF--------SSKMNIVV 130 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEECCT-TTC--------CCEEEEEE
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCce-EEEEEEeCCC-Ccc--------CcEEEEEE
Confidence 7999987533 25999999999999999999999999999998765 3666664322 111 12456666
Q ss_pred EEeccc-ccCCCCcCcceeEEEeHHHHhhccCChHHH
Q 027463 124 LEVTEE-LESWPEQANYKRIWLSVEEAFKSCRYDWMI 159 (223)
Q Consensus 124 ~~v~~~-~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~ 159 (223)
+..... .....+.|..++.|++++++.+++....+.
T Consensus 131 a~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~i~ 167 (198)
T 1vhz_A 131 AQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDPDFN 167 (198)
T ss_dssp EEEEEECCCCCCCSSCCCEEEEEGGGGGGGGGCTTTC
T ss_pred EEeCCcccCCCCCCceEEEEEEEHHHHHHHHHcCCCC
Confidence 654322 111234456788999999999987665433
No 56
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.70 E-value=4.2e-17 Score=132.30 Aligned_cols=111 Identities=17% Similarity=0.079 Sum_probs=74.6
Q ss_pred eEEEEEEEeccCCccccccccCCceEEEEEEeC----------CCCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeec
Q 027463 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTP----------NRDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLD 92 (223)
Q Consensus 23 ~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~----------~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~ 92 (223)
.+++++++..++ ++|||+++. ..+.|.||||++| |||+.+||+||++||||+.+...
T Consensus 46 ~av~v~~~~~~~------------~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~ 112 (191)
T 3o6z_A 46 NGATILLYNTKK------------KTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEV 112 (191)
T ss_dssp CEEEEEEEETTT------------TEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCE
T ss_pred CEEEEEEEECCC------------CEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcE
Confidence 356677776432 389999875 3346999999999 99999999999999999997544
Q ss_pred CCCeeEEEeeccCCCccCCCCCCceEEEEEEEEeccccc----CCCCcCcceeEEEeHHHHhhccCCh
Q 027463 93 ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELE----SWPEQANYKRIWLSVEEAFKSCRYD 156 (223)
Q Consensus 93 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~----~~~~~e~~~~~W~~~~e~~~~l~~~ 156 (223)
..++.+.. ..... ....++|.+....... ...+.|..++.|++++++.+++...
T Consensus 113 -~~l~~~~~-~~~~~--------~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g 170 (191)
T 3o6z_A 113 -RKLFELYM-SPGGV--------TELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTG 170 (191)
T ss_dssp -EEEEEEES-CTTTB--------CCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHS
T ss_pred -EEEEEEEe-CCCcc--------CcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 25565432 22211 1356777776543211 1124567789999999999886443
No 57
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.69 E-value=9e-17 Score=129.97 Aligned_cols=115 Identities=21% Similarity=0.144 Sum_probs=80.1
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCC-----CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCC
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDEN 94 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~-----~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~ 94 (223)
..+.++++|+++.+ +..+|||++|.. .+.|.||||++|.|||+.+||+||++||||+.+... .
T Consensus 32 ~~~~~~~~v~i~~~-----------~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~ 99 (194)
T 1nqz_A 32 HYRRAAVLVALTRE-----------ADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAV-T 99 (194)
T ss_dssp -CEEEEEEEEEESS-----------SSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGC-E
T ss_pred CCceEEEEEEEecC-----------CCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccce-E
Confidence 45677777777433 234799999864 367999999999999999999999999999987655 2
Q ss_pred CeeEEEeeccCCCccCCCCCCceEEEEEEEEecccc--cCCCCcCcceeEEEeHHHH-hhccCC
Q 027463 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL--ESWPEQANYKRIWLSVEEA-FKSCRY 155 (223)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~--~~~~~~e~~~~~W~~~~e~-~~~l~~ 155 (223)
.++.+.+..... ...+++|.+.+.... ......|..+++|++++++ .+...+
T Consensus 100 ~l~~~~~~~~~~---------~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 154 (194)
T 1nqz_A 100 LLGELDDVFTPV---------GFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPLVR 154 (194)
T ss_dssp EEEECCCEEETT---------TEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCCEE
T ss_pred EEEEccCccCCC---------CeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCCCcc
Confidence 566554332211 135667777765322 2223456678899999999 776543
No 58
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.69 E-value=4.1e-16 Score=136.92 Aligned_cols=130 Identities=17% Similarity=0.104 Sum_probs=89.2
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC---CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCe
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR---DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPL 96 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~---~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l 96 (223)
..+.++++|+++. ++|||++++.. +.|.+|||++|+|||+++||+||++||||+.+.... .+
T Consensus 206 ~~~~~v~~vv~~~--------------~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~-~~ 270 (352)
T 2qjt_B 206 PNFVTVDALVIVN--------------DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQ-LA 270 (352)
T ss_dssp CEEEEEEEEEEET--------------TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHH-HH
T ss_pred CCceEEEEEEEEC--------------CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccch-hc
Confidence 4456777777742 27999998753 679999999999999999999999999999976431 22
Q ss_pred ----eEEEeeccCCCccCCCCCCceEEEEEEEEecccc---cCCCCcCcceeEEEeH-HHHhhc--cCChHHHHHHHHHH
Q 027463 97 ----GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL---ESWPEQANYKRIWLSV-EEAFKS--CRYDWMIDALKKFL 166 (223)
Q Consensus 97 ----~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~---~~~~~~e~~~~~W~~~-~e~~~~--l~~~~~~~~l~~~~ 166 (223)
....|..+.... .......+|.+.+.... ...+.+|..+++|+++ +++.++ ...+..+.++..++
T Consensus 271 ~~~~~~~~~~~~~~~~-----~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~ 345 (352)
T 2qjt_B 271 IAKRCEKVFDYPDRSV-----RGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILL 345 (352)
T ss_dssp HHEEEEEEECCTTSCT-----TSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHHHH
T ss_pred ceeeeeEEecCCCCCC-----CccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHHHH
Confidence 222333322211 11224455555554322 1123456678899999 999986 56678889999888
Q ss_pred HHh
Q 027463 167 LGM 169 (223)
Q Consensus 167 ~~l 169 (223)
.++
T Consensus 346 ~~l 348 (352)
T 2qjt_B 346 EEC 348 (352)
T ss_dssp HHT
T ss_pred HHh
Confidence 877
No 59
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.68 E-value=2.2e-16 Score=123.08 Aligned_cols=126 Identities=18% Similarity=0.191 Sum_probs=84.1
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC----CCeecCCcccCCCCCHH-HHHHHHHHHHhC-ceeeecC
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR----DDLVFPKGGWEDDETVS-EAACREALEEAG-VRGLLDE 93 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~----~~W~lPGG~vE~gEs~~-eAA~REl~EEtG-l~~~~~~ 93 (223)
..|..+.+|+.+..+ +.++|||++|... +.|.||||+++.||++. +||+||+.|||| +.+...
T Consensus 17 ~~~~~~~~vi~~~~~----------~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~- 85 (155)
T 1x51_A 17 REESSATCVLEQPGA----------LGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHL- 85 (155)
T ss_dssp TEEEEEEEEEEEECS----------SSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTC-
T ss_pred CeEEEEEEEEEecCC----------CCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeee-
Confidence 345556666665421 1358999998754 56999999999999996 999999999999 765433
Q ss_pred CCeeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHH
Q 027463 94 NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLL 167 (223)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~ 167 (223)
..++.+.+...+. ....++|.+.+..... ...+..+++|++++++.++.....++.++..+..
T Consensus 86 ~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 148 (155)
T 1x51_A 86 RHLGEVVHTFSHI---------KLTYQVYGLALEGQTP--VTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQG 148 (155)
T ss_dssp EECCCBCCBCSSC---------EEEEEEEEEECSSCCC--CCCCCTTEEEEEHHHHHHSCCCHHHHHHHHHHHH
T ss_pred eecceEEEecCCc---------cEEEEEEEEEEcCCCC--CCCCCCccEEccHHHhhhcCCCHHHHHHHHHHHh
Confidence 1344333222111 2345677776653211 1224457899999999998777777777766654
No 60
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.68 E-value=1.3e-16 Score=126.21 Aligned_cols=107 Identities=19% Similarity=0.129 Sum_probs=73.7
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCC-----CCCee-cCCcccCCCCCHHHHHHHHHHHHhCceeeecC-C
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-----RDDLV-FPKGGWEDDETVSEAACREALEEAGVRGLLDE-N 94 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~-----~~~W~-lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~-~ 94 (223)
+.++++++++.++ +|||++|.. .+.|. +|||++++|||+.+||+||++||||+.+.... .
T Consensus 34 ~~~v~v~i~~~~~-------------~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~ 100 (171)
T 1q27_A 34 VRVVNAFLRNSQG-------------QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWR 100 (171)
T ss_dssp CEEEEEEEEETTT-------------EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEE
T ss_pred ceEEEEEEECCCC-------------eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceE
Confidence 5566777776542 799988743 35698 99999999999999999999999999976532 1
Q ss_pred CeeEEE-eeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhc
Q 027463 95 PLGEWE-FRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKS 152 (223)
Q Consensus 95 ~l~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~ 152 (223)
.++.+. |.... ....++|.+........ ...+..+++|++++++.++
T Consensus 101 ~~~~~~~~~~~~----------~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~ 148 (171)
T 1q27_A 101 PLASFSPFQTTL----------SSFMCVYELRSDATPIF-NPNDISGGEWLTPEHLLAR 148 (171)
T ss_dssp EEEEECSSSSCC----------SSEEEEEEEECCCCCCS-CTTTCSCCEEECHHHHHHH
T ss_pred EEEEEeccCCCC----------ccEEEEEEEEECCcccc-CchhhheEEEecHHHHHHH
Confidence 333332 22211 11567777776333221 2345678899999999865
No 61
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.68 E-value=3.9e-16 Score=134.89 Aligned_cols=147 Identities=14% Similarity=0.080 Sum_probs=91.2
Q ss_pred CceeEEEEEEEeccCCcccccccc----CCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCcee------
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKM----EKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGVRG------ 89 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~----~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~------ 89 (223)
++..++.+|+.+......+..... .+.++|||++|...+.|.||||++|+|||+.+||+||++||||+.+
T Consensus 108 gp~~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~ 187 (292)
T 1q33_A 108 GPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAE 187 (292)
T ss_dssp EEEEEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSH
T ss_pred CccccceeeeeeecccccCceeeeccCCCCceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCcccccccc
Confidence 567788888887643222211111 1357999999988889999999999999999999999999999873
Q ss_pred ------eecCCCe---eEEEeeccCCCccCCCCCCceEEEEEEEEecc-c----ccCCCCcCcceeEEEeHHHHhhccCC
Q 027463 90 ------LLDENPL---GEWEFRSKSRMNSCNSKEGGCRGYMFALEVTE-E----LESWPEQANYKRIWLSVEEAFKSCRY 155 (223)
Q Consensus 90 ------~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~-~----~~~~~~~e~~~~~W~~~~e~~~~l~~ 155 (223)
.+. ..+ +...|....... .+.+.......+|.+.... . ....+.++..+++|++++++.++ .
T Consensus 188 ~~~l~~~l~-~l~~~~g~~vy~~~~~dp-r~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L--~ 263 (292)
T 1q33_A 188 KREIEEKLH-KLFSQDHLVIYKGYVDDP-RNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL--Y 263 (292)
T ss_dssp HHHHHHHHH-HHTTTSEEEEEEEECCCT-TCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC--S
T ss_pred chhhHHHHH-HHhhcccceeecccccCC-CCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCccc--C
Confidence 122 122 322222111100 0011112334455444321 1 12223456678999999999864 4
Q ss_pred hHHHHHHHHHHHHhh
Q 027463 156 DWMIDALKKFLLGMN 170 (223)
Q Consensus 156 ~~~~~~l~~~~~~l~ 170 (223)
...+.++..++.++.
T Consensus 264 ~~h~~il~~~~~~~~ 278 (292)
T 1q33_A 264 ASHSQFIKLVAEKRD 278 (292)
T ss_dssp TTHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHhc
Confidence 567788888776653
No 62
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.68 E-value=5.3e-16 Score=127.19 Aligned_cols=100 Identities=17% Similarity=0.093 Sum_probs=66.1
Q ss_pred eEEEEEEeCCC----CCeecCCcccC-CCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEE
Q 027463 47 VLVLMISTPNR----DDLVFPKGGWE-DDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYM 121 (223)
Q Consensus 47 ~~VLLv~r~~~----~~W~lPGG~vE-~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (223)
++|||+++... +.|.||||++| .|||+.+||+||++||||+.+... ..++.+ |..+... ....++
T Consensus 55 ~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~-~~l~~~-~~~~~~~--------~~~~~~ 124 (207)
T 1mk1_A 55 GNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTW-QVLVDL-DTAPGFS--------DESVRV 124 (207)
T ss_dssp SEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEE-EEEEEE-CSCTTTB--------CCCEEE
T ss_pred CEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCccccc-EEEEEE-EcCCCcc--------ccEEEE
Confidence 38999987532 45999999999 999999999999999999998765 356555 3322221 113456
Q ss_pred EEEEeccc-ccC--CCCcCcceeEEEeHHHHhhccCCh
Q 027463 122 FALEVTEE-LES--WPEQANYKRIWLSVEEAFKSCRYD 156 (223)
Q Consensus 122 f~~~v~~~-~~~--~~~~e~~~~~W~~~~e~~~~l~~~ 156 (223)
|.+..... ... ..+.|..+++|++++++.+++...
T Consensus 125 f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 125 YLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp EEEEEEEECCC----------CEEEEEHHHHHHHHHTT
T ss_pred EEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 66654332 211 224456788999999999886543
No 63
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.67 E-value=1.6e-16 Score=130.69 Aligned_cols=112 Identities=23% Similarity=0.200 Sum_probs=75.1
Q ss_pred eEEEEEEEeccCCccccccccCCceEEEEEEeCCC---------CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecC
Q 027463 23 LVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR---------DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDE 93 (223)
Q Consensus 23 ~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~---------~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~ 93 (223)
.+|++|+++.++ ++|||+++... +.|.||||++|+|||+++||+||++||||+.+...
T Consensus 58 ~av~vl~~~~~~------------~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~- 124 (209)
T 1g0s_A 58 HAAVLLPFDPVR------------DEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRT- 124 (209)
T ss_dssp CEEEEEEEETTT------------TEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCE-
T ss_pred CEEEEEEEECCC------------CEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcE-
Confidence 366677776432 38999876432 34999999999999999999999999999997644
Q ss_pred CCeeEEEeeccCCCccCCCCCCceEEEEEEEEeccc-c-c---CCCCcCcceeEEEeHHHHhhccCCh
Q 027463 94 NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEE-L-E---SWPEQANYKRIWLSVEEAFKSCRYD 156 (223)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~-~-~---~~~~~e~~~~~W~~~~e~~~~l~~~ 156 (223)
..++.+ |..++.. ....++|.+.+... . . ...+.|..++.|++++++.+++...
T Consensus 125 ~~l~~~-~~~~g~~--------~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g 183 (209)
T 1g0s_A 125 KPVLSF-LASPGGT--------SERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEG 183 (209)
T ss_dssp EEEEEE-ESCTTTB--------CCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTT
T ss_pred EEeEEE-ecCCCcc--------CcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 256655 3332221 12466777765321 1 1 1233455688999999999886543
No 64
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.67 E-value=1e-16 Score=133.06 Aligned_cols=93 Identities=22% Similarity=0.172 Sum_probs=61.5
Q ss_pred CCeecCCcccCC-CCCHHHHHHHHHHHHhCceeeecC-CCeeEEEeeccCCCccCCCCCCceEEEEEEEEecccc-----
Q 027463 58 DDLVFPKGGWED-DETVSEAACREALEEAGVRGLLDE-NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEEL----- 130 (223)
Q Consensus 58 ~~W~lPGG~vE~-gEs~~eAA~REl~EEtGl~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~----- 130 (223)
+.|+||||++|+ |||+++||+||++||||+.+.... ..++.+.. ..... ...+++|.+.+....
T Consensus 95 ~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~-~~g~~--------~~~~~~f~a~~~~~~~~~~~ 165 (218)
T 3q91_A 95 VTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWS-GVGLT--------GSRQTMFYTEVTDAQRSGPG 165 (218)
T ss_dssp EEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEE-C---C--------CEEEEEEEEEECGGGBCC--
T ss_pred eEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEec-CCCcc--------ceEEEEEEEEECCcccccCC
Confidence 459999999999 999999999999999999973221 24555432 11111 235677777765321
Q ss_pred -cCCCCcCcceeEEEeHHHHhhccCChHHH
Q 027463 131 -ESWPEQANYKRIWLSVEEAFKSCRYDWMI 159 (223)
Q Consensus 131 -~~~~~~e~~~~~W~~~~e~~~~l~~~~~~ 159 (223)
....++|..++.|++++++.+++....+.
T Consensus 166 ~~~~d~~E~~ev~wv~l~el~~~i~~g~i~ 195 (218)
T 3q91_A 166 GGLVEEGELIEVVHLPLEGAQAFADDPDIP 195 (218)
T ss_dssp -------CCEEEEEEEGGGHHHHHHCTTSC
T ss_pred CCCCCCCcEEEEEEEEHHHHHHHHHcCCCC
Confidence 11224466789999999999887554443
No 65
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.66 E-value=5.1e-16 Score=128.14 Aligned_cols=111 Identities=15% Similarity=0.012 Sum_probs=74.7
Q ss_pred CCceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC-------CCeec-CCcccCCCCC--H----HHHHHHHHHHH
Q 027463 19 DQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-------DDLVF-PKGGWEDDET--V----SEAACREALEE 84 (223)
Q Consensus 19 ~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~-------~~W~l-PGG~vE~gEs--~----~eAA~REl~EE 84 (223)
..+++.+..+++..+ ++|||++|..+ +.|.+ |||++|+||| + ++||+||++||
T Consensus 64 ~~~~q~i~~~II~~~-------------grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EE 130 (211)
T 3e57_A 64 ETTKQVIPYVVIMDG-------------DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEE 130 (211)
T ss_dssp TTEEEEEEEEEEEET-------------TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHH
T ss_pred CcccceEEEEEEEEC-------------CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHH
Confidence 355666655555543 28999998643 46988 9999999999 4 99999999999
Q ss_pred hCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhc
Q 027463 85 AGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKS 152 (223)
Q Consensus 85 tGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~ 152 (223)
||+++... .+++.+.+....... ....++|.+..... .. .+.+..+++|++++++.++
T Consensus 131 tGl~v~~~-~~ig~~~~~~~~~~~-------~~l~~~f~~~~~~g-~~-~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 131 VDVSLREL-EFLGLINSSTTEVSR-------VHLGALFLGRGKFF-SV-KEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp EEEEEEEE-EEEEEEECCSSHHHH-------TEEEEEEEEEEEEE-EE-SCTTTCEEEEEEHHHHHHH
T ss_pred hCCeeecc-EEEEEEeccCCCCCe-------EEEEEEEEEEeCCc-ee-CCCCeEEEEEEEHHHHHHh
Confidence 99988766 377777653211111 12345677765432 11 2345568899999999887
No 66
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.64 E-value=6.7e-16 Score=127.05 Aligned_cols=112 Identities=19% Similarity=0.160 Sum_probs=73.4
Q ss_pred EEEEEEEeccCCccccccccCCceEEEEEEeCC----CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEE
Q 027463 24 VAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN----RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEW 99 (223)
Q Consensus 24 ~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~----~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~ 99 (223)
+++++++..++. +..+|||+++.. .+.|.||||++|+||++.+||+||++||||+.+.... .++.+
T Consensus 63 av~v~~v~~~~~---------~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~-~l~~~ 132 (212)
T 2dsc_A 63 GVAVIPVLQRTL---------HYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAE-CSPAV 132 (212)
T ss_dssp EEEEEEEEECTT---------SCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEE-ECCCE
T ss_pred EEEEEEEEeCCC---------CCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceE-EeccE
Confidence 566666654421 235899998633 2359999999999999999999999999999976552 44443
Q ss_pred EeeccCCCccCCCCCCceEEEEEEEEecc--c----cc-CCCCcCcceeEEEeHHHHhhccC
Q 027463 100 EFRSKSRMNSCNSKEGGCRGYMFALEVTE--E----LE-SWPEQANYKRIWLSVEEAFKSCR 154 (223)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~f~~~v~~--~----~~-~~~~~e~~~~~W~~~~e~~~~l~ 154 (223)
+..+.... ...++|.+.+.. . .. ...++|..++.|++++++.+++.
T Consensus 133 -~~~~~~~~--------~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 133 -CMDPGLSN--------CTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp -ESCTTTBC--------CEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred -EcCCCccC--------ceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 22222211 234556555432 1 01 11244667899999999988765
No 67
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.64 E-value=8.8e-16 Score=131.35 Aligned_cols=111 Identities=18% Similarity=0.156 Sum_probs=71.4
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCC-CCCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEE
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPN-RDDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWE 100 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~-~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~ 100 (223)
..++|+|+++..+ ++|||+++.. .+.|.+|||++|+|||+.+||+||++||||+.+.... .+..+
T Consensus 101 v~~v~avv~~~~~------------~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~-~~~~~- 166 (271)
T 2a6t_A 101 IPVRGAIMLDMSM------------QQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRI-NPNEF- 166 (271)
T ss_dssp CCEEEEEEBCSSS------------SEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTC-CTTCE-
T ss_pred CCeEEEEEEECCC------------CEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeee-eeeee-
Confidence 3567888887532 3899999865 4679999999999999999999999999999976432 22222
Q ss_pred eeccCCCccCCCCCCceEEEEEEEEeccc-c--cCCCCcCcceeEEEeHHHHhhccCC
Q 027463 101 FRSKSRMNSCNSKEGGCRGYMFALEVTEE-L--ESWPEQANYKRIWLSVEEAFKSCRY 155 (223)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~f~~~v~~~-~--~~~~~~e~~~~~W~~~~e~~~~l~~ 155 (223)
....... ....+|.+..... . .....+|..+++|++++++.++...
T Consensus 167 -~~~~~~~--------~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 167 -IDMTIRG--------QNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp -EEEEETT--------EEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred -ccCCcCC--------ceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 2111111 1345565543321 1 1113446678899999999886543
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.56 E-value=2.6e-14 Score=127.16 Aligned_cols=108 Identities=12% Similarity=-0.020 Sum_probs=83.3
Q ss_pred eEEEEEEeCCC----CCeecCCcccCCCCCHHHHHHHHHHHHhCceeeecCCCeeEEEeeccCCCccCCCCCCceEEEEE
Q 027463 47 VLVLMISTPNR----DDLVFPKGGWEDDETVSEAACREALEEAGVRGLLDENPLGEWEFRSKSRMNSCNSKEGGCRGYMF 122 (223)
Q Consensus 47 ~~VLLv~r~~~----~~W~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f 122 (223)
++|||++|..+ |.|+||||++|.| |+++|+.||+.||||+.+.... .++.+.+...+. ....++|
T Consensus 252 g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~-~l~~~~h~~~h~---------~~~~~~~ 320 (369)
T 3fsp_A 252 GRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTE-PIVSFEHAFSHL---------VWQLTVF 320 (369)
T ss_dssp SEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECC-CCCEEEEECSSE---------EEEEEEE
T ss_pred CEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeec-ccccEEEEcceE---------EEEEEEE
Confidence 38999999764 5699999999999 9999999999999999988773 777766554332 1345677
Q ss_pred EEEecccccCCCCcCcceeEEEeHHHHhhccCChHHHHHHHHHHHHhh
Q 027463 123 ALEVTEELESWPEQANYKRIWLSVEEAFKSCRYDWMIDALKKFLLGMN 170 (223)
Q Consensus 123 ~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l~~~~~~~~l~~~~~~l~ 170 (223)
.+.+... ..+..+++|++++++.+....+.++.++..+...+.
T Consensus 321 ~~~~~~~-----~~e~~~~~Wv~~~el~~~~l~~~~~~il~~l~~~~~ 363 (369)
T 3fsp_A 321 PGRLVHG-----GPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWAS 363 (369)
T ss_dssp EEEECCS-----SCCCTTEEEEEGGGGGGSCCCHHHHHHHHHHHHHTC
T ss_pred EEEEcCC-----CCCccccEEeeHHHhhhCCCCHHHHHHHHHHHHHhc
Confidence 7766542 234567899999999998777888888877765543
No 69
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.53 E-value=2.7e-14 Score=117.66 Aligned_cols=120 Identities=15% Similarity=0.068 Sum_probs=78.5
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCC-CHHHHHHHHHHHHhCceeeecC----C
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDE-TVSEAACREALEEAGVRGLLDE----N 94 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gE-s~~eAA~REl~EEtGl~~~~~~----~ 94 (223)
+.+.++.++++...... -....++..+|||++| ..+.|.||||++|+|| |+.+||+||++||||+.+.... .
T Consensus 31 ~~~~~~~~~l~~~~~~v--v~~i~~~~~~vLl~~r-~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~ 107 (212)
T 1u20_A 31 GYKHACHALLHAPSQAK--LFDRVPIRRVLLMMMR-FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDD 107 (212)
T ss_dssp SCEEEEEEEEEEECCCE--ETTTEECCEEEEEEEE-TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGG
T ss_pred CCcccceEEEeCCCceE--EEEEEecCCEEEEEEe-CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeee
Confidence 45667777777653210 1112234568888877 4678999999999999 9999999999999999976432 1
Q ss_pred CeeEEEeeccCCCccCCCCCCceEEEEEEEEeccc-cc---------CCCCcCcceeEEEeHHHHhhc
Q 027463 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEE-LE---------SWPEQANYKRIWLSVEEAFKS 152 (223)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~-~~---------~~~~~e~~~~~W~~~~e~~~~ 152 (223)
.++.+.+..+ .....++|.+.+... .. ...+.+..++.|++++++.+.
T Consensus 108 ~~~~~~~~~~----------~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 108 YRSSQVREHP----------QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp EEEEEEECTT----------SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred EEEeccccCC----------CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 3444443322 123567787776532 10 012234567899999999654
No 70
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.50 E-value=2.9e-13 Score=113.41 Aligned_cols=132 Identities=15% Similarity=0.067 Sum_probs=85.4
Q ss_pred ceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC-----CCeecC-CcccCCC------CC---HHHHHHHHHHHHh
Q 027463 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-----DDLVFP-KGGWEDD------ET---VSEAACREALEEA 85 (223)
Q Consensus 21 ~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~-----~~W~lP-GG~vE~g------Es---~~eAA~REl~EEt 85 (223)
.+.++++++++.+ ++|||.+|... +.|.+| ||+++.| |+ +.+||+||++|||
T Consensus 58 ~h~av~v~v~~~~-------------g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EEl 124 (235)
T 2dho_A 58 LHRAFSVFLFNTE-------------NKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAEL 124 (235)
T ss_dssp CEEEEEEEEECTT-------------CCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEEcCC-------------CEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHH
Confidence 4556666666533 37888887532 579999 5999999 88 5999999999999
Q ss_pred Cceeeec----CCCeeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhcc--------
Q 027463 86 GVRGLLD----ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC-------- 153 (223)
Q Consensus 86 Gl~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l-------- 153 (223)
|+.+... -.+++.+.|....... .......++|.+........ ..+|..+++|++++++.+++
T Consensus 125 Gi~~~~v~~~~l~~l~~~~y~~~~~~~----~~~~e~~~vf~~~~~~~~~~-~~~Ev~~~~wv~~~el~~~l~~~~~~~~ 199 (235)
T 2dho_A 125 GIPLEEVPPEEINYLTRIHYKAQSDGI----WGEHEIDYILLVRMNVTLNP-DPNEIKSYCYVSKEELKELLKKAASGEI 199 (235)
T ss_dssp CCCGGGSCGGGSEEEEEEEEEEECSSS----BEEEEEEEEEEEECCCCCCC-CTTTEEEEEEECHHHHHHHHHHHHTTSS
T ss_pred CCCccccChhhcEEEEEEEEeccCCCc----cceeEEEEEEEEEECCCCcC-ChHHEEEEEEEcHHHHHHHHhhccCCCc
Confidence 9986411 1256777665432211 00112456776665443321 23466788999999998753
Q ss_pred -CChHHHHHHHHHHHHhh
Q 027463 154 -RYDWMIDALKKFLLGMN 170 (223)
Q Consensus 154 -~~~~~~~~l~~~~~~l~ 170 (223)
..++++.++..++..+-
T Consensus 200 ~ftp~~~~i~~~~L~~ww 217 (235)
T 2dho_A 200 KITPWFKIIAATFLFKWW 217 (235)
T ss_dssp CBCHHHHHHHHHTHHHHH
T ss_pred EECHhHHHHHHHHHHHHH
Confidence 34667777766665433
No 71
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.49 E-value=5.2e-13 Score=111.71 Aligned_cols=117 Identities=17% Similarity=0.203 Sum_probs=80.3
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC-----CCeecCCcccCCCCC--------------------HH
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-----DDLVFPKGGWEDDET--------------------VS 74 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~-----~~W~lPGG~vE~gEs--------------------~~ 74 (223)
.+|.++++|+++.... +..+|||++|..+ |.|.||||++|++|+ +.
T Consensus 6 ~~r~aA~lill~~~~~---------g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~ 76 (232)
T 3qsj_A 6 DIRKAATLVVIRDGAN---------KDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALA 76 (232)
T ss_dssp CEEEEEEEEEEEECGG---------GCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHH
T ss_pred CCcceEEEEEEEcCCC---------CCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHH
Confidence 5788899999887531 1269999999654 579999999999987 59
Q ss_pred HHHHHHHHHHhCceeeecCC--------------------------------------CeeEE-EeeccCCCccCCCCCC
Q 027463 75 EAACREALEEAGVRGLLDEN--------------------------------------PLGEW-EFRSKSRMNSCNSKEG 115 (223)
Q Consensus 75 eAA~REl~EEtGl~~~~~~~--------------------------------------~l~~~-~~~~~~~~~~~~~~~~ 115 (223)
.||+||++||||+.+..... .+..+ .+..+. +...
T Consensus 77 ~aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~------~~~r 150 (232)
T 3qsj_A 77 VTALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPP------TQPV 150 (232)
T ss_dssp HHHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCT------TSSS
T ss_pred HHHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCc------CCce
Confidence 99999999999997432100 01111 111111 2234
Q ss_pred ceEEEEEEEEeccccc-CCCCcCcceeEEEeHHHHhh
Q 027463 116 GCRGYMFALEVTEELE-SWPEQANYKRIWLSVEEAFK 151 (223)
Q Consensus 116 ~~~~~~f~~~v~~~~~-~~~~~e~~~~~W~~~~e~~~ 151 (223)
.+...||.+.+..... .....|..+++|++++++.+
T Consensus 151 RfdT~FFla~lpq~~~v~~d~~E~~~~~W~~p~eal~ 187 (232)
T 3qsj_A 151 RFDTRFFLCVGQHLGEPRLHGAELDAALWTPARDMLT 187 (232)
T ss_dssp EEEEEEEEEECSSCCCCCCCSSSEEEEEEEEHHHHHH
T ss_pred eEEEEEEEEECCCCCCCCCCCCceEEEEEEcHHHHHH
Confidence 5678899888774321 22445777899999999963
No 72
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.48 E-value=3.4e-13 Score=113.75 Aligned_cols=132 Identities=14% Similarity=0.111 Sum_probs=85.4
Q ss_pred ceeEEEEEEEeccCCccccccccCCceEEEEEEeCCC-----CCeecCC-cccCCC------CCH---HHHHHHHHHHHh
Q 027463 21 LRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-----DDLVFPK-GGWEDD------ETV---SEAACREALEEA 85 (223)
Q Consensus 21 ~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~-----~~W~lPG-G~vE~g------Es~---~eAA~REl~EEt 85 (223)
.+.++++++++.+ ++|||.+|... +.|.+|+ |+++.| |++ .+||+||++|||
T Consensus 69 ~h~av~v~v~~~~-------------g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EEl 135 (246)
T 2pny_A 69 LHRAFSVVLFNTK-------------NRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAEL 135 (246)
T ss_dssp CEEEEEEEEECTT-------------CCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEeCC-------------CEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHH
Confidence 4556666666533 37888887532 5699995 999999 887 999999999999
Q ss_pred Cceeeec----CCCeeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhcc--------
Q 027463 86 GVRGLLD----ENPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKSC-------- 153 (223)
Q Consensus 86 Gl~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~l-------- 153 (223)
|+.+... -.+++.+.|....... .......++|.+..+..... ..+|..+++|++++++.+++
T Consensus 136 Gi~~~~v~~~~l~~l~~~~y~~~~~~~----~~~~e~~~vf~~~~~~~~~~-~~~Ev~~~~wv~~eel~~~l~~~~~~~~ 210 (246)
T 2pny_A 136 GIPGEQISPEDIVFMTIYHHKAKSDRI----WGEHEICYLLLVRKNVTLNP-DPSETKSILYLSQEELWELLEREARGEV 210 (246)
T ss_dssp CCCTTTCCGGGSEEEEEEEEEEESSSS----BEEEEEEEEEEEECCCCCCC-CTTTEEEEEEECHHHHHHHHHHHHHTSS
T ss_pred CCCccccCccccEEEEEEEEEecCCCc----eeeeEEEEEEEEEECCCCCC-ChHHeeEEEEEeHHHHHHHHHhccCCCc
Confidence 9985411 1256766665432211 00112456676665433321 23466788999999997753
Q ss_pred -CChHHHHHHHHHHHHhh
Q 027463 154 -RYDWMIDALKKFLLGMN 170 (223)
Q Consensus 154 -~~~~~~~~l~~~~~~l~ 170 (223)
..++++.++..++..+-
T Consensus 211 ~ftp~~~~i~~~~l~~ww 228 (246)
T 2pny_A 211 KVTPWLRTIAERFLYRWW 228 (246)
T ss_dssp CBCHHHHHHHHHTHHHHG
T ss_pred eECHhHHHHHHHHHHHHH
Confidence 34667777777665443
No 73
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.38 E-value=4.3e-12 Score=109.81 Aligned_cols=140 Identities=11% Similarity=0.072 Sum_probs=87.4
Q ss_pred eeEEEEEEEeccCCccccccccCCceEEEEEEeCCC-----CCe-ecCCcccCCCCCHHHHHHHHHHHHhCceeeecC--
Q 027463 22 RLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNR-----DDL-VFPKGGWEDDETVSEAACREALEEAGVRGLLDE-- 93 (223)
Q Consensus 22 r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~-----~~W-~lPGG~vE~gEs~~eAA~REl~EEtGl~~~~~~-- 93 (223)
...+-+.+|..++ +..++||.+|... |.| .+++|++++|||+.+||+||+.||+|+......
T Consensus 118 ~~~vh~~~~~~~~----------~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l 187 (300)
T 3dup_A 118 AYGVHLNGYVGAG----------ADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQA 187 (300)
T ss_dssp EEEEEEEEEESCG----------GGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTC
T ss_pred EEEEEEEEEEecC----------CeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhc
Confidence 4455555666543 3458888877532 568 699999999999999999999999999865432
Q ss_pred CCeeEEEeeccCCCccCCCCCCceEEEEEEEEecccccCCC-CcCcceeEEEeHHHHhhccCC-hHHH-HHHHHHHHHhh
Q 027463 94 NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWP-EQANYKRIWLSVEEAFKSCRY-DWMI-DALKKFLLGMN 170 (223)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~-~~e~~~~~W~~~~e~~~~l~~-~~~~-~~l~~~~~~l~ 170 (223)
.+.+.+.|......+ ......++|.+.+.......+ ++|..+++|++++++.+++.. ..++ .....+++.+.
T Consensus 188 ~~~g~i~y~~~~~~G-----~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~pg~F~p~~~lV~ldfl~ 262 (300)
T 3dup_A 188 IPVGAITYCMESPAG-----IKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRTTEAFKFNVNLTVIDFAI 262 (300)
T ss_dssp EEEEEEEEEEEETTE-----EEEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHHCCCBCTTHHHHHHHHHH
T ss_pred cccceEEEEEecCCC-----eEEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhcCCCcCccHHHHHHHHHH
Confidence 145555554322111 012345677777665433223 346678899999999887654 2222 22223445555
Q ss_pred hcCccc
Q 027463 171 TERTQL 176 (223)
Q Consensus 171 ~~~~~~ 176 (223)
....++
T Consensus 263 RhG~i~ 268 (300)
T 3dup_A 263 RHGLID 268 (300)
T ss_dssp HTTSSC
T ss_pred HhCCcC
Confidence 555555
No 74
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.36 E-value=3.5e-12 Score=111.45 Aligned_cols=116 Identities=15% Similarity=0.154 Sum_probs=84.2
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHh-CceeeecCCCeeE
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEA-GVRGLLDENPLGE 98 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEt-Gl~~~~~~~~l~~ 98 (223)
.++..+|||+.+.+ +|||+ .+.+ |.||||.++ ++..++|+||++||| |+++++. ..++.
T Consensus 181 ~p~~~vgaii~~~g--------------~vLL~--~~~G-W~LPG~~~~--~~~~~~a~RE~~EEttGl~v~~~-~L~~v 240 (321)
T 3rh7_A 181 EGEIRLGAVLEQQG--------------AVFLA--GNET-LSLPNCTVE--GGDPARTLAAYLEQLTGLNVTIG-FLYSV 240 (321)
T ss_dssp HSCEEEEEEEESSS--------------CEEEB--CSSE-EBCCEEEES--SSCHHHHHHHHHHHHHSSCEEEE-EEEEE
T ss_pred CCcceEEEEEEECC--------------EEEEe--eCCC-ccCCcccCC--CChhHHHHHHHHHHhcCCEEeec-eEEEE
Confidence 46788999988743 68999 5567 999988654 444569999999997 9999987 36777
Q ss_pred EEeeccCCCccCCCCCCceEEEEEEEEecccccCCCCcCcceeEEEeHHHHhhc-cCChHHHHHHHHHHHHhhhcC
Q 027463 99 WEFRSKSRMNSCNSKEGGCRGYMFALEVTEELESWPEQANYKRIWLSVEEAFKS-CRYDWMIDALKKFLLGMNTER 173 (223)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~~~~~~~~~e~~~~~W~~~~e~~~~-l~~~~~~~~l~~~~~~l~~~~ 173 (223)
|+... . .....+|.+.+.+.. ..+++||++++++.. +.++.++..|+.++..-..+.
T Consensus 241 ~~~~~--~---------~~~~i~f~~~~~~g~-------~~e~~~f~~~elp~~~~~~~~~~~~L~~y~~e~~~g~ 298 (321)
T 3rh7_A 241 YEDKS--D---------GRQNIVYHALASDGA-------PRQGRFLRPAELAAAKFSSSATADIINRFVLESSIGN 298 (321)
T ss_dssp EECTT--T---------CCEEEEEEEEECSSC-------CSSSEEECHHHHTTCEESSHHHHHHHHHHHHTTSCSS
T ss_pred EEcCC--C---------ceEEEEEEEEeCCCC-------eeeeEEECHHHCCCcccCCHHHHHHHHHHHHHhhcCC
Confidence 65322 1 123467777765321 257899999999875 577888888888876555543
No 75
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.36 E-value=9.1e-13 Score=109.11 Aligned_cols=95 Identities=16% Similarity=0.061 Sum_probs=61.9
Q ss_pred EEEEEEeCCCCCeecCCcccCCCC-CHHHHHHHHHHHHhCceeeecC-CCeeEEEeeccCCCccCCCCCCceEEEEEEEE
Q 027463 48 LVLMISTPNRDDLVFPKGGWEDDE-TVSEAACREALEEAGVRGLLDE-NPLGEWEFRSKSRMNSCNSKEGGCRGYMFALE 125 (223)
Q Consensus 48 ~VLLv~r~~~~~W~lPGG~vE~gE-s~~eAA~REl~EEtGl~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 125 (223)
++||+.+. .+.|.||||++|+|| |+.+||+||++||||+.+.... ..+..+... .... .....++|.+.
T Consensus 66 ~~ll~~r~-~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~-~~~~-------~~~~~~~f~~~ 136 (217)
T 2xsq_A 66 AILMQMRF-DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSH-VGSG-------PRVVAHFYAKR 136 (217)
T ss_dssp EEEEEEET-TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEE-ECSS-------SSEEEEEEEEE
T ss_pred cEEEEEcc-CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeec-CCCC-------CeEEEEEEEEE
Confidence 45665554 578999999999999 9999999999999999876321 122333211 1111 12356777777
Q ss_pred eccc-c---------cCCCCcCcceeEEEeHHHHhh
Q 027463 126 VTEE-L---------ESWPEQANYKRIWLSVEEAFK 151 (223)
Q Consensus 126 v~~~-~---------~~~~~~e~~~~~W~~~~e~~~ 151 (223)
+... . ......|..++.|++++++.+
T Consensus 137 l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d 172 (217)
T 2xsq_A 137 LTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRD 172 (217)
T ss_dssp CCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTT
T ss_pred eccccceecccccccccccCCceeeEEEEEHHHhhh
Confidence 6532 1 111233556789999999863
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.17 E-value=2.2e-11 Score=99.07 Aligned_cols=68 Identities=21% Similarity=0.278 Sum_probs=54.3
Q ss_pred CceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCCCHHHHHHHHHHHHhCc------eeeecC
Q 027463 20 QLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDETVSEAACREALEEAGV------RGLLDE 93 (223)
Q Consensus 20 ~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gEs~~eAA~REl~EEtGl------~~~~~~ 93 (223)
++|..|.+|++..+. +..+|||+++ ..+.|.||||++|+||++++|+.||+.||+|+ ..++.
T Consensus 56 g~R~sV~avil~~~~----------~~phVLLlq~-~~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIg- 123 (208)
T 3bho_A 56 GMRRTVEGVLIVHEH----------RLPHVLLLQL-GTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVID- 123 (208)
T ss_dssp CSEEEEEEEEEEEET----------TEEEEEEEEE-ETTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEE-
T ss_pred CCceEEEEEEEEcCC----------CCcEEEEEEc-CCCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEh-
Confidence 888888777775543 3568999997 45689999999999999999999999999994 44455
Q ss_pred CCeeEE
Q 027463 94 NPLGEW 99 (223)
Q Consensus 94 ~~l~~~ 99 (223)
..+|.|
T Consensus 124 e~lg~w 129 (208)
T 3bho_A 124 DCIGNW 129 (208)
T ss_dssp EEEEEE
T ss_pred heEEEE
Confidence 367765
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.04 E-value=2e-10 Score=92.72 Aligned_cols=98 Identities=11% Similarity=0.003 Sum_probs=60.7
Q ss_pred ccCCceeEEEEEEEeccCCccccccccCCceEEEEEEeCCCCCeecCCcccCCCC-CHHHHHHHHHHHHhCc-eeeecCC
Q 027463 17 YEDQLRLVAGCIPYKFEKNDENKNCKMEKKVLVLMISTPNRDDLVFPKGGWEDDE-TVSEAACREALEEAGV-RGLLDEN 94 (223)
Q Consensus 17 ~~~~~r~~~g~I~~~~~~~~~~~~~~~~~~~~VLLv~r~~~~~W~lPGG~vE~gE-s~~eAA~REl~EEtGl-~~~~~~~ 94 (223)
+..+.|.++-|.+|-.+.. ..-..-.-...+|++-+..+.|.||||+||+|| |+++|+.||+.||+|+ .+... .
T Consensus 16 ~~~~~~hach~mlya~~~~---~lfg~~p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~-~ 91 (214)
T 3kvh_A 16 LGPGWSHSCHAMLYAANPG---QLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEA-D 91 (214)
T ss_dssp SCTTCEEEEEEEEEEEEEE---EETTTEEEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGG-G
T ss_pred hccCccEeeEEEEEcCCcc---ccccccchhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeee-e
Confidence 3356788888888876521 000000012235555556789999999999999 9999999999999997 34433 2
Q ss_pred CeeEEEeeccCCCccCCCCCCceEEEEEEEEecc
Q 027463 95 PLGEWEFRSKSRMNSCNSKEGGCRGYMFALEVTE 128 (223)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~~ 128 (223)
++....+..+ .....++|.+.+..
T Consensus 92 y~~s~~~~yp----------~~V~LHfY~crl~~ 115 (214)
T 3kvh_A 92 YLSSHLTEGP----------HRVVAHLYARQLTL 115 (214)
T ss_dssp EEEEEEC--------------CEEEEEEEEECCH
T ss_pred eEEEEeccCC----------CEEEEEEEEEEeeC
Confidence 4444433322 12456788887664
Done!