BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027465
(223 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/224 (88%), Positives = 208/224 (92%), Gaps = 2/224 (0%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAFY+EE++ EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING
Sbjct: 1 MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKDAREV TAEGKALAEAQGLFFMETSALDSSNV AAF+TVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
RKVMISQEL ++D + NGKTVVL+GE A+ KK GCCSS
Sbjct: 181 RKVMISQELNKQDVTRIENGKTVVLQGEGDVEAAQSKK-GCCSS 223
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/225 (87%), Positives = 211/225 (93%), Gaps = 3/225 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAFYSEE++ EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQK++ING
Sbjct: 1 MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKDAREV TAEGK+LAEAQGLFF+ETSALDSSNVT AFQTVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGK-TVVLEGEKKEADAEPKKAGCCSS 223
RKVMISQELK++D S NGK TVV++GE + + EPKK GCCSS
Sbjct: 181 RKVMISQELKKQDVSWMENGKTTVVIQGE-DQVEGEPKKGGCCSS 224
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/227 (87%), Positives = 211/227 (92%), Gaps = 5/227 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAFY+EE++ EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING
Sbjct: 1 MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKDAR+V TAEGKALAEAQGLFFMETSALDSSNV AAF+TVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDARKVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKK---EADAEPKKAGCCSS 223
RKVM+SQEL ++D + NGKTVVL+GE + EADA+ KK CCSS
Sbjct: 181 RKVMMSQELNKQDVTRIENGKTVVLQGEGEGDGEADAQSKKR-CCSS 226
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/224 (87%), Positives = 209/224 (93%), Gaps = 2/224 (0%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAFY+EE++ EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM+ING
Sbjct: 1 MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKDAREV T EGKALAEAQGLFFMETSALDSSNV +AFQTVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSS-SFNGKTVVLEGEKKEADAEPKKAGCCSS 223
RKVM+SQELK++D+ + NGKTVVL+ +E + E KK GCCSS
Sbjct: 181 RKVMMSQELKKQDTPWTENGKTVVLQEGDREVEVESKK-GCCSS 223
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/224 (86%), Positives = 208/224 (92%), Gaps = 2/224 (0%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y+E+++ EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQK+DING
Sbjct: 1 MAHYNEDEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRQTFDSIGRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNV AAFQTVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
RKVM+SQEL + + NGK+VV++GE EAD + KK GCCSS
Sbjct: 181 RKVMMSQELTKHEVPRIENGKSVVIQGENLEADGQSKK-GCCSS 223
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/225 (86%), Positives = 208/225 (92%), Gaps = 3/225 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAFYSE+D+AEDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING
Sbjct: 1 MAFYSEDDKAEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDS+GRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKDAREV T EGK LAEAQGLFFMETSALDSSNV AAFQTVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVPTVEGKDLAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGE-KKEADAEPKKAGCCSS 223
RKV++SQEL + + NGKTVVL+G+ +E +AE KK GCCSS
Sbjct: 181 RKVILSQELNKPGAPELGNGKTVVLQGDGNQEGNAETKK-GCCSS 224
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/225 (85%), Positives = 209/225 (92%), Gaps = 2/225 (0%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAFYSE+D+A+DYLFK+VLIGDSAVGKSNLLARFAR+EFYP+SKSTIGVEFQTQKMDING
Sbjct: 1 MAFYSEDDKADDYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIG+WLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKDAREV+TAEGKALAEAQGLFFMETSALDSSNV AAFQTVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGE-KKEADAEPKKAGCCSS 223
RKVM+SQEL + + NGKTVVL+G+ +E +A KK CCSS
Sbjct: 181 RKVMMSQELNKPGAPELGNGKTVVLKGDGDQEGNAGTKKGWCCSS 225
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/225 (84%), Positives = 208/225 (92%), Gaps = 3/225 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAF SEE++ EDYLFK+VL+GDSAVGKSNLLARFAR+EFYPNSKSTIGVEFQTQK+DING
Sbjct: 1 MAFVSEEEKTEDYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNEL THSDMNV
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDL+DAREV+TAEGKALAEAQGLFFMETSALDSSNV AAFQTVV EIYNILS
Sbjct: 121 VTILVGNKSDLRDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKE--ADAEPKKAGCCSS 223
RKVM+S ELK++D + +GKTVVL+G++ + A PK GCCSS
Sbjct: 181 RKVMMSHELKKQD-APLDGKTVVLQGDENQERATESPKSGGCCSS 224
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/224 (85%), Positives = 204/224 (91%), Gaps = 4/224 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAFYSE+D++EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTF SIGRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKD REV+TAEGKALAEAQGLFFMETSALDSSNV AAF+TVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
RKVM SQEL ++D +S NGK VV+ + E KK GCCSS
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVI---PSDGQGESKKGGCCSS 221
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/224 (85%), Positives = 204/224 (91%), Gaps = 4/224 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAFYSE+D++EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTF SIGRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKD REV+TAEGKALAEAQGLFFMETSALDSSNV AAF+TVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
RKVM SQEL ++D +S NGK VV+ + E KK GCCSS
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVI---PSDGQGEFKKGGCCSS 221
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/225 (84%), Positives = 206/225 (91%), Gaps = 3/225 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAF SEE++ EDYLFK+VL GDSAVGKSNLLARFAR+EFYP+SKSTIGVE QTQK+DING
Sbjct: 1 MAFVSEEEKTEDYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNEL THSDMNV
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDL+DAREV+TAEGKALAEAQGLFFMETSALDSSNV AAFQTVV EIYNILS
Sbjct: 121 VTILVGNKSDLRDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKE--ADAEPKKAGCCSS 223
RKVM+S ELK++D + +GKTVVL+G++ + A PK GCCSS
Sbjct: 181 RKVMMSHELKKQD-APLDGKTVVLQGDENQERATESPKSGGCCSS 224
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/224 (83%), Positives = 204/224 (91%), Gaps = 4/224 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAF+SE+D++EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING
Sbjct: 1 MAFHSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISR+QTF SIGRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLK REV T+EGKALAEAQGLFFMETSALDSSNV AAF+TVV EIYNILS
Sbjct: 121 VTILVGNKSDLKGIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
RKVM SQEL ++D +S NGK VV+ E++ E KK GCCS+
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVIPSEEQ---GESKKGGCCST 221
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/222 (85%), Positives = 201/222 (90%), Gaps = 4/222 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAF+SE+DR+EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQK+DING
Sbjct: 1 MAFHSEDDRSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISR+QTF SIGRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKD REV TAEGKALAEAQGLFFMETSA DSSNV AAF+TVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDIREVPTAEGKALAEAQGLFFMETSARDSSNVAAAFETVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCC 221
RKVM SQEL ++D +S NGK VV+ EA E KK GCC
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVI---PSEAQGEAKKGGCC 219
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/224 (85%), Positives = 204/224 (91%), Gaps = 4/224 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M YSEE++ EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING
Sbjct: 1 MDVYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDS+G+WLNELHTHSDMNV
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKDAREV+TAEGKALAE Q LFFMETSALDSSNVTAAFQTVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDAREVSTAEGKALAETQDLFFMETSALDSSNVTAAFQTVVREIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGE-KKEADAEPKK-AGCC 221
RKVM S E ++D+ NGKTVVL+G+ +EA AEP+ GCC
Sbjct: 181 RKVM-SNEFNKQDAPLMGNGKTVVLQGDGSQEAIAEPRNGGGCC 223
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/223 (82%), Positives = 200/223 (89%), Gaps = 4/223 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAFYSE++++EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQK+ ING
Sbjct: 1 MAFYSEDNKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISR QTF SIGRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKD REV T+EGKALAEAQGLFFMETSALDSSNV AAF+TVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCS 222
RKVM SQEL ++D +S NGK VV+ E +++ GCCS
Sbjct: 181 RKVMTSQELNKQDPASLSNGKKVVI---PSEGESKTGGGGCCS 220
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/224 (77%), Positives = 199/224 (88%), Gaps = 2/224 (0%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +E++++DYLFK+VL+GDS+VGKSNLLARFAR+EF+PNSKSTIGVEFQTQK+ I+G
Sbjct: 1 MAYGGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDI+RRQTFDS+GRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTIL+GNK+DLK AREV+TAEGKALAEAQGLFFMETSALDSSNV AAFQTVV EIY+ILS
Sbjct: 121 VTILIGNKTDLKHAREVSTAEGKALAEAQGLFFMETSALDSSNVKAAFQTVVKEIYSILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
RKV QE K+ D S NGK VVL+ + + +A + CCSS
Sbjct: 181 RKVFQCQEQKRSDLQSLSNGKAVVLQTDAPK-EANSGRGWCCSS 223
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 356 bits (913), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 175/225 (77%), Positives = 195/225 (86%), Gaps = 7/225 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +E++++DYLFK+VL+GDS+VGKSNLLARFAR+EFYPNSKSTIGVEFQTQK+ I+G
Sbjct: 1 MAYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDS+GRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNK+DLK AREV+TAEGKALAE+QGLFFMETSALDSSNV AFQTVV EIY ILS
Sbjct: 121 VTILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILS 180
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAG--CCSS 223
RKV SQE K+ + S NGK V+L EP G CCSS
Sbjct: 181 RKVFQSQEQKRSEQSLSNGKPVMLSDSN-----EPTSGGRWCCSS 220
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 355 bits (911), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 174/224 (77%), Positives = 198/224 (88%), Gaps = 3/224 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ ++ +++DYLFK+VL+GDS+VGKSNLLARFAR+EFYPNSKSTIGVEFQTQK+ I+G
Sbjct: 1 MAYDGDDGQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDS+GRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNK+DLK AREV+TAEG+ALAEAQGLFFMETSALDSSNV AAFQTVV EIY+ILS
Sbjct: 121 VTILVGNKTDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
RKV S E K+ + S NGK VVL+GE + + + CCSS
Sbjct: 181 RKVFQSLEQKKSELQSLSNGKAVVLQGETNQTSSGGR--WCCSS 222
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/224 (76%), Positives = 197/224 (87%), Gaps = 2/224 (0%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +E +++DYLFK+VL+GDS+VGKSNLLARFAR+EF+PNSKSTIGVEFQTQK+ I+G
Sbjct: 1 MAYGGDEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDI+RRQTFDS+GRWLNELH HSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTIL+GNK+DLK AREV+ AEGKALAEAQGLFFMETSALDSSNVTAAFQTVV EIY+ILS
Sbjct: 121 VTILIGNKTDLKHAREVSPAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVKEIYSILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
RKV SQE K+ + S NGK VVL+ + A + + CCSS
Sbjct: 181 RKVFQSQEQKKSELQSLSNGKAVVLQSDAPSATSSGGR-WCCSS 223
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 173/224 (77%), Positives = 196/224 (87%), Gaps = 3/224 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA ++ +++DYLFK+VLIGDS+VGKSNLLARFAR+EFYPNSKSTIGVEFQTQK+ I+G
Sbjct: 1 MANDGDDGQSQDYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDS+GRWLNELH HSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNK+DLK AREV+TAEG+ALAEAQGLFFMETSALDSSNV AAFQTVV EIY+ILS
Sbjct: 121 VTILVGNKTDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
RKV S E K+ + S +GK VVL+GE + + + CCSS
Sbjct: 181 RKVFQSLEQKKSELQSLSSGKAVVLQGEANQTSSGGR--WCCSS 222
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/223 (74%), Positives = 192/223 (86%), Gaps = 2/223 (0%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M Y+ E++ EDYLFK+VLIGDSAVGKSNLLAR+AR+EFYPNSKSTIGVEFQTQ M I+G
Sbjct: 1 MMSYAGEEQTEDYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRQTFD+I RWL+ELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VT++VGNK+DL DAREV+T EG ALAEAQ ++F+ETSALDS+NV AFQTVV EIYNILS
Sbjct: 121 VTVIVGNKTDLLDAREVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADA-EPKKAGCCS 222
RKV+ QE K + S NGKTVVL+ + E+ A + K CCS
Sbjct: 181 RKVLSCQEQKLESKIS-NGKTVVLQEAESESTAKQTGKLWCCS 222
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 157/187 (83%), Positives = 178/187 (95%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +E++++DYLFK+VL+GDS+VGKSNLLARFAR+EFYPNSKSTIGVEFQTQK+ I+G
Sbjct: 1 MAYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDS+GRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNK+DLK AREV+TAEGKALAE+QGLFFMETSALDSSNV AFQTVV EIY ILS
Sbjct: 121 VTILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILS 180
Query: 181 RKVMISQ 187
RK ++++
Sbjct: 181 RKDLMTE 187
>gi|255647765|gb|ACU24343.1| unknown [Glycine max]
Length = 168
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/169 (87%), Positives = 154/169 (91%), Gaps = 2/169 (1%)
Query: 56 MDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTH 115
MDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTH
Sbjct: 1 MDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTH 60
Query: 116 SDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
SDMNVVTILVGNKSDLKDAREV TAEGKALAEAQGLFFMETSALDSSNV AAF+TVV EI
Sbjct: 61 SDMNVVTILVGNKSDLKDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEI 120
Query: 176 YNILSRKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
YNILSRKVMISQEL ++D + NGKTVVL+GE A+ KK GCCSS
Sbjct: 121 YNILSRKVMISQELNKQDVTRIENGKTVVLQGEGDVEAAQSKK-GCCSS 168
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 171/216 (79%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
E+D EDYLFKVVLIGDSAVGKSNLL+R+AR+EF+ NSK+TIGVEFQTQ M+ +GKE+KA
Sbjct: 2 EDDPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKA 61
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF+S+GRWL+EL HSDMN+VT+LV
Sbjct: 62 QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLV 121
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK DL+ REV E KALAEA+ LFF+ETSAL+++NV AFQ V+ E+YN +SRK +
Sbjct: 122 GNKCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALN 181
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S K K S+ + K ++ E KK CC
Sbjct: 182 SDSYKSKLLSNRSTKVSLVPNGDAATKTELKKYACC 217
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 170/215 (79%), Gaps = 4/215 (1%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
E E+YLFKVV+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ MDINGK+VKAQ
Sbjct: 6 EGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQ 65
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQERFRAVTSAYYRGA GALLVYDISRR TFD++GRWL EL+THSD V +LVG
Sbjct: 66 IWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVG 125
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NK DL + REV EGKALAEA+GLFFMETSALDS+NV AF+ V+ EIY+ +SRK++ S
Sbjct: 126 NKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNS 185
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K + + V +EG+ K+ + + GCC
Sbjct: 186 DSYK----AELSLNRVSIEGDSKDDQKQSNRFGCC 216
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 170/216 (78%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
E+D EDYLFKVVLIGDSAVGKSNLL+R+AR+EF+ NSK+TIGVEFQTQ M+ +GKE+KA
Sbjct: 2 EDDPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKA 61
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF+S+GRWL+EL HSDMN+VT+LV
Sbjct: 62 QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLV 121
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK DL+ REV E KALAEA+ LFF+ETSAL+++NV AFQ V+ E+YN +SRK +
Sbjct: 122 GNKCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALN 181
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S K K S+ + K ++ KK CC
Sbjct: 182 SDSYKPKLLSNRSTKVSLVPNGDAATKTGLKKYACC 217
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 170/212 (80%), Gaps = 4/212 (1%)
Query: 10 AEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWD 69
AE+YLFKVV+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ MDI+GKEVKAQIWD
Sbjct: 9 AEEYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGKEVKAQIWD 68
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQERFRAVTSAYYRGA GALLVYDISRR TFD++GRWL EL+THSD V +LVGNK
Sbjct: 69 TAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKC 128
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL + REV EGKALAEA+GLFFMETSALD++NV AF+ V+ EIY+ +SRK++ S
Sbjct: 129 DLDNIREVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSRKILNSDSY 188
Query: 190 KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K + + V ++G+ K+ + + GCC
Sbjct: 189 K----AELSLNRVSIDGDSKDDKKQTSRFGCC 216
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 169/212 (79%), Gaps = 4/212 (1%)
Query: 10 AEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWD 69
AE+YLFKVV+IGDSAVGKSNLL+R+AR+EF P+SK+TIGVEFQTQ M I GKEVKAQIWD
Sbjct: 9 AEEYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEVKAQIWD 68
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQERFRAVTSAYYRGA GALLVYDI+RR TFD++GRWL EL+THSD V +LVGNK
Sbjct: 69 TAGQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKC 128
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL D R+V EGKALAEA+GLFFMETSALD++NV AF+ V+ EIY+ +SRKV+ S
Sbjct: 129 DLGDIRQVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSRKVLNSDSY 188
Query: 190 KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K + + V ++G+ K+ + + GCC
Sbjct: 189 K----AELSLNRVSIDGDSKDEQKQGSRFGCC 216
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 170/212 (80%), Gaps = 3/212 (1%)
Query: 10 AEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWD 69
AE+YLFKVV+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ MDI+GKEVKAQIWD
Sbjct: 11 AEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKEVKAQIWD 70
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQERFRAVTSAYYRGA GALLVYDISRR TFD++GRWL EL+THSD V +LVGNK
Sbjct: 71 TAGQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTVAKMLVGNKC 130
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL + REV EGKALAE++GLFFMETSALDS+NV AF+ V+ EIYN +SRK++ S
Sbjct: 131 DLDNIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVSRKILNSDSY 190
Query: 190 KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K + S + + + + + K+ + + GCC
Sbjct: 191 KAELSLN---RVSIDDSDSKDGQKQTSRFGCC 219
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/222 (65%), Positives = 177/222 (79%), Gaps = 12/222 (5%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+E+ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ M+I+GKEVK
Sbjct: 3 SDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDS+GRWL+EL THSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R+V+ EGK+LAEA+GLFFMETSALDS+NV AF+ V+ EIYN +SRKV+
Sbjct: 123 VGNKCDLENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKA----GCCS 222
S K + S N T+V G ++ K+A CCS
Sbjct: 183 NSDTYKAE--LSLNRVTLVNNG------SDSKQAQGYFSCCS 216
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 144/220 (65%), Positives = 178/220 (80%), Gaps = 7/220 (3%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ M+I+GKEVK
Sbjct: 3 SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDS+GRWL+EL THSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R+VT EGK+LAEA+GLFFMETSALDS+NV AF+ V+ EIYN +SRKV+
Sbjct: 123 VGNKCDLENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 182
Query: 185 ISQELKQKDSSSFNGKTVV--LEGEKKEADAEPKKAGCCS 222
S K + S N T+V +G K+ ++ + CCS
Sbjct: 183 NSDTYKAE--LSLNRVTLVNNSDGSKQ---SQSYFSSCCS 217
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 174/217 (80%), Gaps = 3/217 (1%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
E++ E+YLFKVV+IGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I+GKEVKA
Sbjct: 2 EDEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKA 61
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDS+ RWL+EL THS+ V +LV
Sbjct: 62 QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLV 121
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL++ R+V+ EGK+LAEA+GLFF+ETSALDS+NV AF+ V+ EIYN +SRKV+
Sbjct: 122 GNKSDLENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLN 181
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S K + S N ++V G A + + CCS
Sbjct: 182 SDSYKAE--LSVNRVSLVSNGADGAKQANSRYS-CCS 215
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 174/217 (80%), Gaps = 3/217 (1%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
E++ E+YLFKVV+IGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I+GKEVKA
Sbjct: 89 EDEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKA 148
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDS+ RWL+EL THS+ V +LV
Sbjct: 149 QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLV 208
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL++ R+V+ EGK+LAEA+GLFF+ETSALDS+NV AF+ V+ EIYN +SRKV+
Sbjct: 209 GNKSDLENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLN 268
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S K + S N ++V G A + + CCS
Sbjct: 269 SDSYKAE--LSVNRVSLVSNGADGAKQANSRYS-CCS 302
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 171/212 (80%), Gaps = 3/212 (1%)
Query: 10 AEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWD 69
AE+YLFKVV+IGDSAVGKSNLL+R+AR+EF P+SK+TIGVEFQTQ M+I+ KEVKAQIWD
Sbjct: 9 AEEYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEVKAQIWD 68
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQERFRAVTSAYYRGA GALLVYD+SRR TFD++GRWL EL+THSD V +LVGNK
Sbjct: 69 TAGQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKC 128
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL++ REV EGKALAE++GLFFMETSALDS+NV AF+ V+ EIY+ +SRK++ S
Sbjct: 129 DLENIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSRKILNSDSY 188
Query: 190 KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K + + N ++ +G K+ + + GCC
Sbjct: 189 KAE--LTLNRVSIHNDG-SKDGQKQGSRFGCC 217
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 175/219 (79%), Gaps = 6/219 (2%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+E+ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ M+I+GKEVK
Sbjct: 3 SDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDS+GRWL+EL THSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R+V+ E K LAEA+GLFFMETSALDS+NV AF+ V+ EIYN +SRKV+
Sbjct: 123 VGNKCDLENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 182
Query: 185 ISQELKQKDSSSFNGKTVVLEG-EKKEADAEPKKAGCCS 222
S K + S N T+V G + K+A + CCS
Sbjct: 183 NSDTYKAE--LSLNRVTLVNNGNDSKQAQS---YFSCCS 216
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 175/218 (80%), Gaps = 5/218 (2%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ MDI+GKEVK
Sbjct: 4 SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVK 63
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDS+GRWL+EL THSD V +L
Sbjct: 64 AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMML 123
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R+V+ +G +LAEA+GLFFMETSALDS+NV AF+ V+ EIYN +SRKV+
Sbjct: 124 VGNKCDLENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVL 183
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S K + S N ++V G K+++ CCS
Sbjct: 184 NSDTYKAE--LSVNRVSLVNNGGSKQSEG---YLSCCS 216
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/212 (64%), Positives = 169/212 (79%), Gaps = 7/212 (3%)
Query: 10 AEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWD 69
E+YLFK+V+IGDSAVGKSNLL+R+AR+EF PNSK+TIGVEFQTQ M+I+GKEVKAQIWD
Sbjct: 6 GEEYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWD 65
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQERFRAVTSAYYRGAVGAL+VYDISRR TFD++ RWL EL H+D NVV +LVGNKS
Sbjct: 66 TAGQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKS 125
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL+ REV +G+ LAE++GLFF+ETSALD++NV AFQ VV EIYN +S+K++ S
Sbjct: 126 DLEHIREVPVEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKMLNSDSY 185
Query: 190 KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K + S + + +++GE D K CC
Sbjct: 186 KSELSLN---RVKIMDGE----DPPKTKYSCC 210
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 136/219 (62%), Positives = 168/219 (76%), Gaps = 10/219 (4%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
+++++EDYLFKVVLIGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I+GKE+KA
Sbjct: 4 QDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKELKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TF+++ RW +EL HSD NVV +LV
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVVMLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL REVT E ALAE ++FMETSAL++ NV AFQTV+ EI+ I+S+K +
Sbjct: 124 GNKSDLAHIREVTAEEATALAEKNTMYFMETSALEAVNVVEAFQTVLKEIHKIVSKKALT 183
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEA--DAEPKKAGCCS 222
+ K G TVV G++ D P+ CCS
Sbjct: 184 ADPNK--------GNTVVASGQRLAGSDDTTPRTTACCS 214
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/184 (73%), Positives = 156/184 (84%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
E E+YLFKVV+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ MDINGK+VKAQ
Sbjct: 6 EGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQ 65
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQERFRAVTSAYYRGA GALLVYDISRR TFD++GRWL EL+THSD V +LVG
Sbjct: 66 IWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVG 125
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NK DL + REV EGKALAEA+GLFFMETSALDS+NV AF+ V+ EIY+ +SRK++ S
Sbjct: 126 NKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNS 185
Query: 187 QELK 190
K
Sbjct: 186 DSYK 189
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 172/218 (78%), Gaps = 3/218 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
SE++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ ++I+ KEVK
Sbjct: 4 SEDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVK 63
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDS+GRWL+EL TH D V +L
Sbjct: 64 AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMML 123
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R V+ EGK+LAEA+GLFFMETSALDS+NV AF+ V+ EIY +SRKV+
Sbjct: 124 VGNKCDLENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKVL 183
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S+ K + S N ++V G +P + CCS
Sbjct: 184 NSETYKAE--LSVNRVSLVNNGASTSKQNQPYFS-CCS 218
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 172/218 (78%), Gaps = 7/218 (3%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++R E+YLFK+V+IGDSAVGKSNLL R+AR+EF PNSK+TIGVEFQTQ M I+GKEVK
Sbjct: 2 SDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R TF+++GRWL+EL+THSD V +L
Sbjct: 62 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKML 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
+GNK DL+ R V+ EGK+LAE++GLFFMETSALDS+NV AF+ V+ EIY+ +SRK +
Sbjct: 122 IGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQL 181
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S K++ + N ++V K + K CCS
Sbjct: 182 NSDSYKEE--LTVNRVSLV-----KNENEGTKTFSCCS 212
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/186 (70%), Positives = 160/186 (86%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
SE++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ ++I+ KEVK
Sbjct: 4 SEDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVK 63
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDS+GRWL+EL TH D V +L
Sbjct: 64 AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMML 123
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R V+ EGK+LAEA+GLFFMETSALDS+NV AF+ V+ EIYN +SRKV+
Sbjct: 124 VGNKCDLENIRAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNNVSRKVL 183
Query: 185 ISQELK 190
S+ K
Sbjct: 184 NSETYK 189
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 168/219 (76%), Gaps = 10/219 (4%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
+++++EDYLFKVVLIGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I+GKEVKA
Sbjct: 4 QDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEVKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGAVGAL+V+DI+RR TF+++ RWL+EL HSD +VV +LV
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVVMLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL REVT E ALAE + FMETSAL+S NV AFQTV+ EI+ I+S+K +
Sbjct: 124 GNKSDLAHIREVTVEEATALAENNAMSFMETSALESVNVAEAFQTVLKEIHKIVSKKALT 183
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEA--DAEPKKAGCCS 222
+ K TVV G++ D P+ GCCS
Sbjct: 184 ADPNKS--------NTVVASGQRLAGGDDTTPRTGGCCS 214
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/224 (62%), Positives = 174/224 (77%), Gaps = 8/224 (3%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I GK
Sbjct: 43 AMSSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGK 102
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
EVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TF+S+GRWL+EL HSD V
Sbjct: 103 EVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVA 162
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNK DL++ R V+ EGKALAE +GLFF+ETSALDS+NV AF+ V+ +IYN +SR
Sbjct: 163 RMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSR 222
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAG--CCSS 223
K + S KD + N ++V K + A + +G CCSS
Sbjct: 223 KQLNSDTY--KDELTVNRVSLV----KDDNSASKQSSGFSCCSS 260
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/184 (72%), Positives = 156/184 (84%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
E E+YLFKVV+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ MDI+GK+VKAQ
Sbjct: 6 EGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKDVKAQ 65
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQERFRAVTSAYYRGA GALLVYDISRR TFD++GRWL EL+THSD V +LVG
Sbjct: 66 IWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVG 125
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NK DL + REV EGKALAEA+GLFFMETSALDS+NV AF+ V+ EIY+ +SRK++ S
Sbjct: 126 NKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNS 185
Query: 187 QELK 190
K
Sbjct: 186 DSYK 189
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/186 (70%), Positives = 158/186 (84%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
SE++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ ++I+ KEVK
Sbjct: 4 SEDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSKEVK 63
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TFDS+ RWL+EL TH D V +L
Sbjct: 64 AQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVAMML 123
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R V+ EGK+LAEAQGLFFMETSALDS+NV AF+ V+ EIYN +SRKV+
Sbjct: 124 VGNKCDLENIRAVSIEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVIREIYNNVSRKVL 183
Query: 185 ISQELK 190
S K
Sbjct: 184 NSDTYK 189
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 135/217 (62%), Positives = 171/217 (78%), Gaps = 7/217 (3%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
+++R E+YLFK+V+IGDSAVGKSNLL R+AR+EF PNSK+TIGVEFQTQ M I+GKEVKA
Sbjct: 4 DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R TF+++GRWL+EL+THSD V +L+
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLI 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK DL+ R V+ EGK+LAE++GLFFMETSALDS+NV AF+ V+ EIY+ +SRK +
Sbjct: 124 GNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLN 183
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S K++ + N ++V K + K CCS
Sbjct: 184 SDSYKEE--LTVNRVSLV-----KNENEGTKTFSCCS 213
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 167/219 (76%), Gaps = 4/219 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M I GKEVK
Sbjct: 3 SDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TF+S+GRWL+EL HSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R V+ EGKALAEA+GLFF+ETSALDS+NV AF+ V+ +IYN +SRK +
Sbjct: 123 VGNKCDLENIRAVSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S K K V L + A + CCSS
Sbjct: 183 NSDTYKDK----LTVNRVSLVKDDNSASKQSSGFSCCSS 217
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 138/225 (61%), Positives = 175/225 (77%), Gaps = 12/225 (5%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +D++EDYLFKVVLIGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I G
Sbjct: 1 MAY--NDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF+++GRWL+EL HSD +V
Sbjct: 59 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASV 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK DL + REV+ E LA+ + + F+ETSA+D++NVT AFQ+VV EIY ++S
Sbjct: 119 VVMLVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEA--DAEPKKAGCCSS 223
+K + S S+S TV+ ++ D +PKK CCS+
Sbjct: 179 KKPLAS-------STSMKSNTVLGSSQRLAGIDDTQPKK-NCCST 215
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 155/183 (84%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D AE+YLFK+VLIGDSAVGKSNLL+RFAR+EF NSK+TIGVEFQTQ ++I+GKEVKAQI
Sbjct: 6 DGAEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRAVTSAYYRGA GAL+VYDISRR TFDSI RWL+EL T +D V +LVGN
Sbjct: 66 WDTAGQERFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K DL+ REV+T EGKA AE +GLFFMETSALDS+NV AF+ V+ EIYN +SRKV+ S
Sbjct: 126 KCDLESLREVSTEEGKAFAEEEGLFFMETSALDSTNVQKAFEIVIREIYNNISRKVLNSD 185
Query: 188 ELK 190
K
Sbjct: 186 SYK 188
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/221 (62%), Positives = 173/221 (78%), Gaps = 8/221 (3%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I GKEVK
Sbjct: 3 SDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TF+S+GRWL+EL HSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R V+ EGKALAE +GLFF+ETSALDS+NV AF+ V+ +IYN +SRK +
Sbjct: 123 VGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAG--CCSS 223
S KD + N ++V K + A + +G CCSS
Sbjct: 183 NSDTY--KDELTVNRVSLV----KDDNSASKQSSGFSCCSS 217
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/225 (60%), Positives = 175/225 (77%), Gaps = 12/225 (5%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +D++EDYLFKVVLIGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I+G
Sbjct: 1 MAY--NDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISR+ TFD++GRWL+EL HSD +V
Sbjct: 59 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASV 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK DL + REV+ E LA+ + + F+ETSA+D++NVT AFQ+VV EIY ++S
Sbjct: 119 VVMLVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEA--DAEPKKAGCCSS 223
+K + S S S TV+ ++ D +PK+ CCS+
Sbjct: 179 KKPLTS-------SVSMKSNTVLGSSQRLAGIDDIQPKR-NCCST 215
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/217 (62%), Positives = 167/217 (76%), Gaps = 4/217 (1%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
E+DR E+YLFK+VLIGDSAVGKSNLL+RF+RDEF NSK+TIGVEFQTQ ++I GKEVKA
Sbjct: 4 EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R TF+S+ RWL EL+TH D V +LV
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQMLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK DL+D R V+ EGKALAE +GLFFMETSALD++NV AF+ V+ EI+N +SRK++
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S K + + V L + +++ + CCS
Sbjct: 184 SDAYK----AELSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/221 (62%), Positives = 173/221 (78%), Gaps = 8/221 (3%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I GKEVK
Sbjct: 3 SDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TF+S+GRWL++L HSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R V+ EGKALAE +GLFF+ETSALDS+NV AF+ V+ +IYN +SRK +
Sbjct: 123 VGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAG--CCSS 223
S KD + N ++V K + A + +G CCSS
Sbjct: 183 NSDTY--KDELTVNRVSLV----KDDNSASKQSSGFSCCSS 217
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 168/219 (76%), Gaps = 3/219 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ M+I GKEVK
Sbjct: 3 SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF+S+GRWL+EL THSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL+ R V+ EGKALAE +GLFFMETSALDS+NV AF+ V+ +IY +SRK +
Sbjct: 123 VGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S K + S V L + ++ + CCSS
Sbjct: 183 NSDTYKTELSMK---NRVSLVKDDNKSSTQGFGFSCCSS 218
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/181 (72%), Positives = 155/181 (85%)
Query: 10 AEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWD 69
E+YLFK+VLIGDSAVGKSNLL+RFAR+EF NSK+TIGVEFQTQ ++I+GKE+KAQIWD
Sbjct: 8 GEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEIKAQIWD 67
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDSI RWL EL T +D V +LVGNK
Sbjct: 68 TAGQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVARMLVGNKC 127
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL++ REV+T EGK+LAE +GLFFMETSALD++NV AF+ V+ EIYN +SRKV+ S
Sbjct: 128 DLENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVLNSDSY 187
Query: 190 K 190
K
Sbjct: 188 K 188
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 167/219 (76%), Gaps = 3/219 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ M+I GKEVK
Sbjct: 3 SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF+S+GRWL+EL THSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL+ R V+ EGKALAE +GLFFMETSALDS+NV AF+ V+ +IY +SRK +
Sbjct: 123 VGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQL 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S K + S V L + + + CCSS
Sbjct: 183 NSDTYKTELSMK---NRVSLVKDDNKGSTQGFGFSCCSS 218
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
E+DR E+YLFK+VLIGDSAVGKSNLL+RF+RDEF NSK+TIGVEFQTQ ++I GKEVKA
Sbjct: 4 EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R TF+S+ RWL EL+TH D V +LV
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK DL+D R V+ EGKALAE +GLFFMETSALD++NV AF+ V+ EI+N +SRK++
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S K + S + V L + +++ + CCS
Sbjct: 184 SDAYKAELSVN----RVSLVNNQDGSESSWRNPSCCS 216
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/219 (58%), Positives = 173/219 (78%), Gaps = 4/219 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + ++ DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K +
Sbjct: 7 YGDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSI 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL++ R+V T + K AE +GLFF+ETSAL+++NV AF TV+TEI+NI+++K
Sbjct: 127 LIGNKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIINKKN 186
Query: 184 MISQELKQKD-SSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + + D S+S +GK +++ G +E PK++ CC
Sbjct: 187 LAASDNQGNDNSASLSGKKIIVPGPAQEI---PKRSMCC 222
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/221 (61%), Positives = 167/221 (75%), Gaps = 5/221 (2%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y EE+ EDY+FKVVLIGDSAVGKSNLL R+AR+EF NSK+TIGVEFQTQ M INGKEV
Sbjct: 3 YQEEEAGEDYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGKEV 62
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQ+WDTAGQERFRAVTSAYYRGA+GAL+VYDI+R+QTF++I +WL+EL T+ +VVT+
Sbjct: 63 KAQVWDTAGQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTM 122
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNK DL D REV+ EGK LAE++ LFFMETSAL S+NV AFQ VV EI++ SR++
Sbjct: 123 LVGNKCDLTDIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRRI 182
Query: 184 MISQELKQKDSSSFNGKTVVLEGE---KKEADAEPKKAGCC 221
+ KD G+ + L G K D ++ CC
Sbjct: 183 VPDD--YDKDDRVPRGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 173/221 (78%), Gaps = 3/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + ++ DY+FKVVLIGDSAVGKS +LARF+R+EF +SKSTIGVEFQT+ + I+ K V
Sbjct: 7 YGDANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNKSDL++ R+V T + K AE +GLFF+ETSAL ++NV A+F TV+TEIYNIL++K
Sbjct: 127 LVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNILNKKN 186
Query: 184 MISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + E + +S+S G+ +V+ G +E A K + CC S
Sbjct: 187 LAADESQGNGNSASLLGQKIVIPGPGQEVPA--KSSMCCQS 225
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 150/180 (83%)
Query: 11 EDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDT 70
E+YLFK+VLIGDSAVGKSNLLARFAR+EF NSK+TIGVEFQTQ +DI GKE+KAQIWDT
Sbjct: 11 EEYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDT 70
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQERFRAVTSAYYRGAVGAL+VYDI+RR +FDS+ RWL EL TH D +LVGNK D
Sbjct: 71 AGQERFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCD 130
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
L++ REV+ EGK LAE + LFFMETSALDS+NV AAF+ V+ EIY+ +SRK + S K
Sbjct: 131 LENIREVSREEGKTLAEEESLFFMETSALDSTNVEAAFEVVIREIYHNMSRKTLNSDSYK 190
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/220 (59%), Positives = 171/220 (77%), Gaps = 4/220 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I+ K V
Sbjct: 7 YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL+D R V T + K A+ +GLFF+ETSAL ++NV AF TV+TEI+NI+++K
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTEIFNIVNKKN 186
Query: 184 MISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+++ E + + +S +GK +++ G +E P K+ CCS
Sbjct: 187 LVAGEDQINGNPASLSGKKIIIPGPAQEI---PAKSKCCS 223
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 165/210 (78%), Gaps = 3/210 (1%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFKVV+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ ++I+ KEVKAQIWDT G
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTG 73
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QERFRAVTSAYYRGAVGAL+VYDISRR TFDS+GRWL+EL TH D V +LVGNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLD 133
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 192
+ R+V+ EGK+LAE++GLFFMETSALDS+NV AF+ V+ EIYN +SRKV+ S K +
Sbjct: 134 NIRDVSIEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNSDTYKAE 193
Query: 193 DSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S N ++V G ++ + CCS
Sbjct: 194 --LSVNRVSLVNNGNSTSKQSKGYFS-CCS 220
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 167/221 (75%), Gaps = 5/221 (2%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y EE+ EDY+FKVVLIGDSAVGKSNLL R+AR+EF NSK+TIGVEFQTQ M INGKEV
Sbjct: 3 YQEEEAGEDYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGKEV 62
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQ+WDTAGQERFRAVTSAYYRGA+GAL+VYDI+R+QTF++I +WL+EL T+ +VVT+
Sbjct: 63 KAQVWDTAGQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTM 122
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNK DL + REV+ EGK LAE++ LFFMETSAL S+NV AFQ VV EI++ SR++
Sbjct: 123 LVGNKCDLTNIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRRI 182
Query: 184 MISQELKQKDSSSFNGKTVVLEGE---KKEADAEPKKAGCC 221
+ KD G+ + L G K D ++ CC
Sbjct: 183 VPDD--YDKDDRVPRGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/183 (70%), Positives = 155/183 (84%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
+ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ +DI+GKEVKAQI
Sbjct: 3 EEGEEYLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKAQI 62
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRAVTSAYYRGA GALLVYDISRR TF+SI RWL+EL H D V +LVGN
Sbjct: 63 WDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVARMLVGN 122
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K DL++ R+V+T EGK LAEA+GLFFMETSALD++NV AF+ V+ EI+N +SRKV+ S
Sbjct: 123 KCDLENIRDVSTEEGKNLAEAEGLFFMETSALDATNVKTAFEMVIREIFNNVSRKVLHSD 182
Query: 188 ELK 190
K
Sbjct: 183 SYK 185
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 165/211 (78%), Gaps = 8/211 (3%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK+VLIGDSAVGKSNLL+RFAR+EF NSK+TIGVEFQTQ ++I+GKEVKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAG 71
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QERFRAVTSAYYRGA GAL+VYDISRR TF+SI RWL+EL T +D V +LVGNK DL+
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 192
+ REV+ EGKALAE +GLFFMETSALDS+NV AF+ V+ EIYN +SRKV+ S K +
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNSDSYKAE 191
Query: 193 DSSSFNGKTVVL-EGEKKEADAEPKKAGCCS 222
S N T+V G KK + CCS
Sbjct: 192 --LSVNRVTLVNGSGSKKNM-----FSSCCS 215
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 167/213 (78%), Gaps = 10/213 (4%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK+V+IGDSAVGKSNLL+RFAR+EF NSK+TIGVEFQTQ +DI+GKE+KAQIWDTAG
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAG 73
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QERFRAVTSAYYRGAVGAL+VYDI+RR +FDS+ RWL+EL TH D + +LVGNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVGNKCDLD 133
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 192
REV+ EGK+LAE + LFFMETSALDS+NV AAF+ V+ EIYN +SRK++ S K +
Sbjct: 134 SIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKILNSDSYKAE 193
Query: 193 DSSSFNGKTVVLEGEKKEADAEPKKAG--CCSS 223
+++ + ++ G D KK G CC++
Sbjct: 194 LTAN---RVSLVNG-----DTSSKKYGFSCCNT 218
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 165/212 (77%), Gaps = 4/212 (1%)
Query: 11 EDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDT 70
E+YLFK+V+IGDSAVGKSNLL R+AR+EF +SK+TIGVEFQTQ ++I+GKEVKAQIWDT
Sbjct: 1 EEYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDT 60
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQERFRAVTSAYYRGA GAL+VYDI+RR TFDSI RWL+EL THSD V +LVGNK D
Sbjct: 61 AGQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCD 120
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
L + R V+ EGK+LAE++G+FFMETSALD++NV AF V+ EIYN +SRKV+ S K
Sbjct: 121 LDNIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLNSDSYK 180
Query: 191 QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ S N ++V G + + + CCS
Sbjct: 181 AE--LSVNRVSLVDNG--TDGSKQNQGYSCCS 208
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/221 (58%), Positives = 172/221 (77%), Gaps = 3/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LARFAR+EF +SKSTIGVEFQT+ + I+ K V
Sbjct: 7 YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNK DL + R+V T + K AE +GLFF+ETSAL+++NV +AF TV+TEIYNI+++K
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186
Query: 184 MISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + E + +S+S +G+ +++ G +E A K+ CC +
Sbjct: 187 LAADESQGNGNSASLSGQKIIIPGPAQEIPA--KRNMCCQA 225
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 173/221 (78%), Gaps = 17/221 (7%)
Query: 10 AEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWD 69
+DYLFK+VLIGDSAVGKSNLL+R++R+EF+ NS++TIGVEFQTQ M I GKEVKAQIWD
Sbjct: 8 GDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIWD 67
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQERFRAVTSAYYRGAVGA++VYDIS++QTF+++ RWL EL +SD ++VT+LVGNKS
Sbjct: 68 TAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNKS 127
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL+ R+V+ E LAE +GLFF+ETSALDS+NV AAF+TV+ EI+ ++S+K++ S
Sbjct: 128 DLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSS--- 184
Query: 190 KQKDSSSFNGKTVVLEGEKKEA-----DAEPKKAG--CCSS 223
DSS K L G KK ++P+ +G CCSS
Sbjct: 185 ---DSS----KARTLSGTKKLGLENGNSSKPQDSGLSCCSS 218
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/181 (71%), Positives = 152/181 (83%)
Query: 10 AEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWD 69
E+YLFK+VLIGDSAVGKSNLL+RFAR+EF NSK+TIGVEFQTQ ++I+GKEVKAQIWD
Sbjct: 9 GEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWD 68
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQERFRAVTSAYYRGAVGAL+VYDI+RR TFDS RWL+EL H D V +LVGNK
Sbjct: 69 TAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATVRMLVGNKC 128
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL++ R+V+ EGK LAE +GLFFMETSALDS+NV AF+ V+ EIYN +SRKV+ S
Sbjct: 129 DLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSRKVLNSDSY 188
Query: 190 K 190
K
Sbjct: 189 K 189
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 173/221 (78%), Gaps = 17/221 (7%)
Query: 10 AEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWD 69
+DYLFK+VLIGDSAVGKSNLL+R++R+EF+ NS++TIGVEFQTQ M I GKEVKAQIWD
Sbjct: 8 GDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIWD 67
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQERFRAVTSAYYRGAVGA++VYDIS++QTF+++ RWL EL +SD ++VT+LVGNKS
Sbjct: 68 TAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNKS 127
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL+ R+V+ E LAE +GLFF+ETSALDS+NV AAF+TV+ EI+ ++S+K++ S
Sbjct: 128 DLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSS--- 184
Query: 190 KQKDSSSFNGKTVVLEGEKKEA-----DAEPKKAG--CCSS 223
DSS K L G KK ++P+ +G CCSS
Sbjct: 185 ---DSS----KAGTLSGTKKLGLENGNSSKPQDSGLSCCSS 218
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 169/221 (76%), Gaps = 4/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y ++ + DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 7 YGDQSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL +H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNK DL+ R V T + K A+ +GLFF+ETSAL+S+NV AF TV+TEI+NI+++K
Sbjct: 127 LVGNKCDLESQRVVPTEDAKEFAQKEGLFFLETSALESTNVETAFLTVLTEIFNIVNKKT 186
Query: 184 MISQELKQK-DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + + + +S GK +V+ G A P+K+ CCSS
Sbjct: 187 LAGADNQTNGNPASLGGKKIVVPG---PAQVIPEKSKCCSS 224
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 173/219 (78%), Gaps = 4/219 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + ++ DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 7 YGDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL++ R+V T + K AE +GLFF+ETSAL+++NV AF TV+TEI+NI+++K
Sbjct: 127 LIGNKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIVNKKN 186
Query: 184 MISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + + +++S +GK +++ G +E PK++ CC
Sbjct: 187 LAAGDNQGNGNAASLSGKQIIVPGTAQEI---PKRSMCC 222
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 172/221 (77%), Gaps = 3/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + ++ DY+FKVVLIGDSAVGKS +LARFAR+EF +SKSTIGVEFQT+ + I+ K V
Sbjct: 3 YGDANQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 62
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V I
Sbjct: 63 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 122
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L GNK DL++ R+V T + K AE +GLFF+ETSAL+++NV AF TV+TEIYNI+++K
Sbjct: 123 LTGNKCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKN 182
Query: 184 MISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + E + +S+S +G+ +++ G +E A K+ CC S
Sbjct: 183 LTADENQGNGNSASLSGQKIIVPGPAQEIPA--KRNMCCQS 221
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/219 (58%), Positives = 171/219 (78%), Gaps = 4/219 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I+ K V
Sbjct: 7 YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL +H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL+D R V T + A+ +GLFF+ETSAL ++NV +AF T++TEI+NI+++K
Sbjct: 127 LIGNKSDLEDQRAVPTEDVNEFAQKEGLFFLETSALQATNVESAFMTLLTEIFNIVNKKN 186
Query: 184 MISQELKQK-DSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+I+ E + + +S +GK +++ G +E P K+ CC
Sbjct: 187 LIAGENQSNGNPASLSGKKIIIPGPAQEI---PSKSKCC 222
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 172/222 (77%), Gaps = 4/222 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + ++ DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 7 YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGA+GA+LVYDI++RQTFD I RWL EL +H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL+D R V T + K AE +GLFF+ETSAL+S+NV AF TV+TEI++I++RK
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFSIMNRKN 186
Query: 184 MISQELKQKDSSS--FNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + E + +S+ GK +++ G +E A+ K CCS+
Sbjct: 187 LAAGENQGNGNSASLAGGKKIIIPGPAQEIPAKSKM--CCST 226
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/182 (70%), Positives = 153/182 (84%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+E+ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ M+I GK+VK
Sbjct: 3 SDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF+S+ RWL+EL THSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL + R V+ EGKALAE QGLFFMETSAL+S+NV AF+ V+ +IY SRK +
Sbjct: 123 VGNKCDLDNMRAVSVEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRKQL 182
Query: 185 IS 186
S
Sbjct: 183 NS 184
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 168/213 (78%), Gaps = 3/213 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SKSTIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 18 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 77
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V IL GNK DL
Sbjct: 78 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKCDL 137
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK- 190
++ R+V T + K AE +GLFF+ETSAL+++NV AF TV+TEIYNI+++K + + E +
Sbjct: 138 ENQRDVPTGDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADENQG 197
Query: 191 QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+S+S +G+ +++ G +E A K+ CC S
Sbjct: 198 NGNSASLSGQKIIVPGPAQEIPA--KRNMCCQS 228
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 168/213 (78%), Gaps = 3/213 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SKSTIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 18 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 77
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V IL GNK DL
Sbjct: 78 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKCDL 137
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK- 190
++ R+V T + K AE +GLFF+ETSAL+++NV AF TV+TEIYNI+++K + + E +
Sbjct: 138 ENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADENQG 197
Query: 191 QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+S+S +G+ +++ G +E A K+ CC S
Sbjct: 198 NGNSASLSGQKIIVPGPAQEIPA--KRNMCCQS 228
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 166/219 (75%), Gaps = 3/219 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVE +TQ M+I GKEVK
Sbjct: 3 SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTA QERFRAVTSAYYRGAVGAL+VYDISRR TF+S+GRWL+EL THSD V +L
Sbjct: 63 AQIWDTACQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL+ R V+ EGKALAE +GLFFMETSALDS+NV AF+ V+ +IY +SRK +
Sbjct: 123 VGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S K + S V L + ++ + CCSS
Sbjct: 183 NSDTYKTELSMK---NRVSLVKDDNKSSTQGFGFSCCSS 218
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 166/222 (74%), Gaps = 5/222 (2%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y E + DY+FKVVLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ + V
Sbjct: 8 YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V +
Sbjct: 68 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL R V T + K AE + LFFMETSAL+S+NV AF TV+TEIY I+S+K
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187
Query: 184 MISQEL--KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++ E +SS G +V+ G++ A P KA CC S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEP---APPTKASCCMS 226
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 171/221 (77%), Gaps = 3/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + ++ DY+FKVVLIGDSAVGKS +LARF+R+EF +SKSTIGVEFQT+ + I+ K V
Sbjct: 7 YGDANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNKSDL++ R+V T + K AE +GLFF+ETSAL ++NV A+F TV+TEIYN +++K
Sbjct: 127 LVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNTVNKKN 186
Query: 184 MISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + E + +S+S G+ +++ G +E A K CC S
Sbjct: 187 LAADESQGNGNSASLLGQKIIIPGPAQEIPA--KSNMCCQS 225
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 171/221 (77%), Gaps = 4/221 (1%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A Y + ++ DY+FKVVLIGDSAVGKS +LARFAR++F +SK+TIGVEFQT+ + I K
Sbjct: 4 AGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHK 63
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++R +FD I RWL EL H+D N+V
Sbjct: 64 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIV 123
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
IL+GNKSDL++ R V T + K AE +GLFF+ETSAL ++NV AF TV+TEI+NI+++
Sbjct: 124 IILIGNKSDLEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNIVNK 183
Query: 182 KVMISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K + + E + +S+S +GK +++ G +E PKK+ CC
Sbjct: 184 KNLAADENQGNGNSASLSGKKIIVPGPAQEI---PKKSMCC 221
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 165/212 (77%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I+ + VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GALLVYDI+RRQ+FD I RWL+EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++ R V+T + K AE + LFF+ETSAL ++NV +AFQTV+TEI+ I S+K M+S+
Sbjct: 129 EEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVSEPKSN 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + G V++ G +E K+ CCSS
Sbjct: 189 GAAPAMPGTKVLVPGPAQEI----PKSKCCSS 216
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 171/221 (77%), Gaps = 3/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + ++ DY+FKVVLIGDSAVGKS +LARF+ +EF +SKSTIGVEFQT+ + I+ K V
Sbjct: 7 YGDANQRIDYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNKSDL++ R+V T + K AE +GLFF+ETSAL ++NV A+F TV+TEIYNI+++K
Sbjct: 127 LVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNIVNKKN 186
Query: 184 MISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + E + +S+S G+ +++ G +E A K CC S
Sbjct: 187 LAADESQGNGNSASLLGQKIIIPGPAQEIPA--KSNMCCQS 225
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 166/213 (77%), Gaps = 3/213 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +L+RFARDEF +SK+TIGVEFQT+ + I K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQTFD + RWL EL H+D N+V +LVGNK DL
Sbjct: 68 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLVGNKCDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI-SQELK 190
+ R V T + K A+ +GLFF+ETSA++++NV AF TV+TEI+ I+S+K +I SQ+
Sbjct: 128 DNLRAVPTEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIASQDQG 187
Query: 191 QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ +S +G ++V+ G+ E D KK CC+S
Sbjct: 188 NGNHASLSGTSIVVPGQ--EQDTTTKKKSCCTS 218
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 165/212 (77%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I+ + VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GALLVYDI+RRQ+FD I RWL+EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++ R V+T + K AE + LFF+ETSAL ++NV +AFQTV+TEI+ I S+K M+S+
Sbjct: 129 EEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVSEPKSN 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + G V++ G +E K+ CCSS
Sbjct: 189 GVAPAMAGTKVLVPGPAQEI----PKSKCCSS 216
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/172 (74%), Positives = 149/172 (86%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK+VLIGDSAVGKSNLL+RFAR+EF NSK+TIGVE QTQ ++I+GKEVKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAG 71
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QERFRAVTSAYYRGA GAL+VYDISRR TF+SI RWL+EL T +D V +LVGNK DL+
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
+ REV+ EGKALAE +GLFFMETSALDS+NV AF+ V+ EIYN +SRKV+
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVL 183
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 167/215 (77%), Gaps = 6/215 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYD+++R+TF+ I RWL EL H+D N+V IL+GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+D R V T + K AE +GLFF+ETSAL+++NV +F T++TEIYN +++K + S E Q
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTEIYNTVNKKNLASVE-NQ 193
Query: 192 KDSS---SFNGKTVVLEGEKKEADAEPKKAGCCSS 223
DS+ S GK +V+ G ++ A K + CCSS
Sbjct: 194 GDSNNPGSLAGKKIVIPGSGQDIPA--KTSTCCSS 226
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 165/212 (77%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I+ + VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GALLVYDI+RRQ+FD I RWL+EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++ R V+T + K AE + LFF+ETSAL ++NV ++FQTV+TEI+ I S+K M+S+
Sbjct: 129 EEQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSKKNMVSEPKSN 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + G V++ G +E K+ CCSS
Sbjct: 189 GAAPAMPGTKVLVPGPAQEI----PKSKCCSS 216
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 161/212 (75%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GALLVYDI++RQ+FD I RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+D R V+T + K AE + LFF+ETSAL ++NV AFQTV+TEI+ I S+K M +
Sbjct: 129 EDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAADPRAN 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S GK V++ G +E K+ CCSS
Sbjct: 189 GAAPSLAGKKVIVPGPAQEI----PKSKCCSS 216
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 162/212 (76%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GALLVYDI++RQ+FD I RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+D R V+T + K AE + LFF+ETSAL ++NV AFQTV++EI+ I S+K M +
Sbjct: 128 EDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAADPKAN 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S GK VV+ G +E K+ CCSS
Sbjct: 188 GAAPSLAGKKVVVPGPAQEI----PKSKCCSS 215
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 164/212 (77%), Gaps = 3/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYD+++R+TF+ I RWL EL H+D N+V IL+GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+D R V T + K AE +GLFF+ETSAL+++NV +F T++T+IYN +++K + S E
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLAS-ECDS 193
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S GK +++ G +E A K + CC+S
Sbjct: 194 NNPGSLAGKKILIPGSGQEIPA--KTSTCCTS 223
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 167/221 (75%), Gaps = 4/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 5 YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 64
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V +
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIM 124
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNK+DL+D R V T + K A+ +GLFF+ETSA++++NV AF TV+TEI+NI+++K
Sbjct: 125 LIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFNIVNKKN 184
Query: 184 MISQELKQK-DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + E + + +S GK +++ G P K CCSS
Sbjct: 185 LAADENQSNGNPASLTGKKILVPG---PGQVIPGKKACCSS 222
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/223 (57%), Positives = 167/223 (74%), Gaps = 6/223 (2%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
F S ++ DY+FKVVLIGDSAVGKS LLARF+R+EF SK+TIGVEFQT+ ++I+ K
Sbjct: 4 FQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V
Sbjct: 64 IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK+DL R V T + K A+ + LFFMETSALDS+NV +F TV+TEIY I+S+K
Sbjct: 124 MLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKK 183
Query: 183 VMISQELKQK--DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++ E + DSS G +V+ GE + E K GCC +
Sbjct: 184 NLVANEEGESGGDSSLLQGTKIVVAGE----ETESKGKGCCGT 222
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/223 (57%), Positives = 167/223 (74%), Gaps = 6/223 (2%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
F S ++ DY+FKVVLIGDSAVGKS LLARF+R+EF SK+TIGVEFQT+ ++I+ K
Sbjct: 4 FQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V
Sbjct: 64 IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK+DL R V T + K A+ + LFFMETSALDS+NV +F TV+TEIY I+S+K
Sbjct: 124 MLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKK 183
Query: 183 VMISQELKQK--DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++ E + DSS G +V+ GE + E K GCC +
Sbjct: 184 NLVANEEGESGGDSSLLQGTKIVVAGE----ETESKGKGCCGT 222
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 168/221 (76%), Gaps = 3/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 7 YGDSSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNK+DL++ R V T + K AE +GLFF+ETSAL+++NV AF TV+TEI+NI+++K
Sbjct: 127 LIGNKTDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKN 186
Query: 184 MISQELKQK-DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++ E + + +S GK + + G +E A K CC S
Sbjct: 187 LVAGEDQANGNPASLTGKRITIPGPAQEIPA--KSNMCCKS 225
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 164/212 (77%), Gaps = 3/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYD+++R+TF+ I RWL EL H+D N+V IL+GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+D R V T + K AE +GLFF+ETSAL+++NV +F T++T+IYN +++K + S E
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLAS-EGDS 193
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S GK +++ G +E A K + CC+S
Sbjct: 194 NNPGSLAGKKILIPGSGQEIPA--KTSTCCTS 223
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 169/221 (76%), Gaps = 4/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 5 YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSV 64
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V +
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIM 124
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNK+DL+D R V T + K A+ +GLFF+ETSA++++N+ AF TV+TEI+NI+++K
Sbjct: 125 LIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKN 184
Query: 184 MISQELKQK-DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + + + + +S GK +++ G + P+K CCSS
Sbjct: 185 LAADDNQSNGNPASLTGKKILVPGPGQ---VIPEKKACCSS 222
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 162/212 (76%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GALLVYDI++RQ+FD I RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++ R V++ + K AE + LFF+ETSAL ++NV AFQTV+TEI+ I S+K M +
Sbjct: 129 EEERAVSSEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAADPKAN 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S GK V++ G +E K+ CCSS
Sbjct: 189 GAAPSLAGKKVIVPGPAQEI----PKSKCCSS 216
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 162/215 (75%), Gaps = 6/215 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LL+RFARDEF SKSTIGVEFQT+ + ++GK +KAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI+R+QTF+ + RWL EL H+D NVV ++VGNKSDL
Sbjct: 69 GQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++R ++ EG+ +E +GL+FMETSALDS+NV AF TV+TEIY I+S+K + + +
Sbjct: 129 SNSRAMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAADD--- 185
Query: 192 KDSSSFNGKTVVLEGEKKEADAE---PKKAGCCSS 223
+ N V G K D E KK CCS+
Sbjct: 186 PNGGLANVMPPVPSGNKILLDDELTAVKKRACCST 220
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 162/215 (75%), Gaps = 6/215 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LL+RFARDEF SKSTIGVEFQT+ + ++GK +KAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI+R+QTF+ + RWL EL H+D NVV ++VGNKSDL
Sbjct: 69 GQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++R ++ EG+ +E +GL+FMETSALDS+NV AF TV+TEIY I+S+K + + +
Sbjct: 129 SNSRTMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAADD--- 185
Query: 192 KDSSSFNGKTVVLEGEKKEADAE---PKKAGCCSS 223
+ N V G K D E KK CCS+
Sbjct: 186 PNGGLANVMPPVPSGNKILLDDELTAVKKRACCST 220
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 166/226 (73%), Gaps = 12/226 (5%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LAR+ARDEF +SK+TIGVEFQT+ + I+ K V
Sbjct: 7 YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI+RRQTFD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL D R + T + K AE +GLFF+ETSA +++NV +AF TV+TEI+NI+++K
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186
Query: 184 MISQELKQKDSSSFNGKTVVLEGEKKEADAEP------KKAGCCSS 223
+ + E ++ NG L G+K + P K CC+S
Sbjct: 187 LAASEDQE------NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 163/212 (76%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GALLVYDI++RQ+FD I RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+D R V+T + K AE + +FF+ETSAL ++NV AFQTV++EI+ I S+K + ++
Sbjct: 128 EDERAVSTEDAKEFAEKENVFFLETSALQATNVENAFQTVLSEIFKIHSKKNIAAEPKAN 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S GK V++ G +E K+ CCSS
Sbjct: 188 GSAPSLAGKKVLVPGPAQEI----PKSKCCSS 215
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 169/222 (76%), Gaps = 6/222 (2%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FK+VLIGDS VGKS +L+R+AR+EF +SK+TIGVEFQT+ + ++ K V
Sbjct: 6 YGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSV 65
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD++RRQTFD I RWL EL H+D N+V I
Sbjct: 66 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNIVII 125
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNKSDL+D R ++T + K AE +GLFF+ETSAL++ NV AF TV+TEI+NI+++K
Sbjct: 126 LVGNKSDLEDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNIVNKKN 185
Query: 184 MISQELKQKDSSSFNGKTV-VLEGEKKEADAEPKKAG-CCSS 223
+++ E D S GK + ++ G A P K+G CC+S
Sbjct: 186 LVAGE-GNGDPGSLAGKKIDIVPG---PAQVVPTKSGMCCNS 223
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 162/212 (76%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GALLVYDI++RQ+FD I RWL EL H+D N++ +LVGNKSDL
Sbjct: 68 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+D R V+T + K AE + LFF+ETSAL ++NV +AFQTV++EI+ I S+K +++
Sbjct: 128 EDERAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLSEIFKIHSKKNIVTDPKAN 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ GK V++ G +E K+ CC S
Sbjct: 188 GAAPPLAGKKVLVPGPAQEI----PKSKCCGS 215
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 163/212 (76%), Gaps = 3/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYD+++R+TF+ I RWL EL H+D N+V IL+GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+D R V T + K AE +GLFF+ETSAL+++NV +F T++T+IYN +++K + S E
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLAS-EGDS 193
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S GK +++ +E A K + CC+S
Sbjct: 194 NNPGSLAGKKILIPASGQEIPA--KTSTCCTS 223
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 167/226 (73%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 64 MAGYRAEDDY-DYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDG 122
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 123 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 182
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK+ AE + LFFMETSAL+++NV AF V+T+IYNI+S
Sbjct: 183 VVMLVGNKSDLRHLLAVSTEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVS 242
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAE---PKKAGCCSS 223
+K + + S NG V +GEK + + K+ GCCSS
Sbjct: 243 KKAL-------ETSEQANGSAVPSQGEKIDVGKDVSAVKRGGCCSS 281
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 161/217 (74%), Gaps = 7/217 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + ++GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGA LVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G ALAE +GL F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKTLAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPK-KAGCCSS 223
E + G T+ + ADA K GCCS+
Sbjct: 186 EAAANSTVPGQGTTINV------ADASGNTKKGCCST 216
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 163/214 (76%), Gaps = 4/214 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 14 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVIDHKTVKAQIWDTA 73
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V +LVGNKSDL
Sbjct: 74 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVIMLVGNKSDL 133
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ V T + K AE + LFFMETSAL+++NV AF +V+TEIY I+S+K +++ E +
Sbjct: 134 GTLQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKKTLVANEEVE 193
Query: 192 K--DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+SS G +++ G KE +E K CC S
Sbjct: 194 SGGNSSLLKGTKIIVPG--KEPKSEGSKYNCCLS 225
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 162/216 (75%), Gaps = 6/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ +G+ALAE +GL F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E +S G+ + A+ K GCCS+
Sbjct: 186 EAA---GTSLPGQGTTINVADSSANT---KRGCCST 215
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 164/214 (76%), Gaps = 6/214 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LL+RFAR+EF +SK+TIGVEFQT+ ++I+ K +KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYD+++RQTFD I RWL EL H+D N+V +L+GNKSDL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T + K A+ + L FMETSAL+++NV AAF T++TEIY ++S+K +I+ +
Sbjct: 133 GSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIANDETD 192
Query: 192 KDSSS--FNGKTVVLEGEKKEADAEPKKAGCCSS 223
SS G +V+ G++ +A + +GCC S
Sbjct: 193 SGGSSSLLKGTKIVVPGQEPQAAS----SGCCRS 222
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 162/214 (75%), Gaps = 5/214 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ ++I+ + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTVKAQIWDTA 74
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V +L+GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDL 134
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T + K AE + LFFMETSAL++ NV AF TV+TEIY ++S+K +++ E
Sbjct: 135 GTLRSVATEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYRVVSKKNLVANEESD 194
Query: 192 K--DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+SS G +V+ G++ + KA CC S
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPPTS---KATCCMS 225
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 164/217 (75%), Gaps = 9/217 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDLK R V+ +G+ALAE +GL F+ETSAL++ N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEP-KKAGCCSS 223
E SS+ G+ + ADA ++ CCS+
Sbjct: 186 EA----SSNLPGQGTTI----NVADASANQRRSCCST 214
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 166/226 (73%), Gaps = 12/226 (5%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LAR+ARDEF +SK+TIGVEFQT+ + I+ K V
Sbjct: 7 YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI+RRQTFD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL D R + T + + AE +GLFF+ETSA +++NV +AF TV++EI+NI+++K
Sbjct: 127 LIGNKSDLVDQRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFNIVNKKS 186
Query: 184 MISQELKQKDSSSFNGKTVVLEGEKKEADAEP------KKAGCCSS 223
+ + E ++ NG L G+K + P K CC+S
Sbjct: 187 LAASEDQE------NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/223 (57%), Positives = 171/223 (76%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ S+ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAYRSDEDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI+R T++++ RWL EL H+D N+
Sbjct: 59 KLVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ R V+T +G+A +E +GL+FMETSAL+S+NV AF+ ++T+IY ++S
Sbjct: 119 VVMLVGNKSDLRHLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + E ++ G+T+ + G K+ KK GCCS+
Sbjct: 179 KKALDVGE--DPSAAPAKGQTINVGG--KDDVTATKKVGCCSA 217
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 163/216 (75%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ +G+ALAE +GL F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + +A K+ GCCS+
Sbjct: 186 EAAVGTTLPGQGTTINV----GDASGNTKR-GCCST 216
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 165/221 (74%), Gaps = 4/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGK+ +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 5 YGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 64
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V +
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIM 124
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L GNK+DL+D R V T + K A+ +GLFF+ETSA++++ + AF TV+TEI+NI+++K
Sbjct: 125 LTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKN 184
Query: 184 MISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + E + + +S GK +++ G P K CCSS
Sbjct: 185 LAADENQSNSNPASLTGKKILVPG---PGQVIPGKKACCSS 222
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 163/215 (75%), Gaps = 8/215 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LL+RFAR+EF +SK+TIGVEFQT+ ++I+ K +KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYD+++RQTFD I RWL EL H+D N+V +L+GNKSDL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T + K A+ + L FMETSAL+++NV AAF T++TEIY ++S+K +I+
Sbjct: 133 GSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIAN---- 188
Query: 192 KDSSSFNGKTVVLEGEKKEADA-EPKKA--GCCSS 223
D + G + +L+G K EP+ A GCC S
Sbjct: 189 -DETDSGGSSSLLKGTKXVVPGQEPQAASSGCCRS 222
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 161/217 (74%), Gaps = 7/217 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ +G AL+E +GL F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPK-KAGCCSS 223
E S G T+ + AD K GCCS+
Sbjct: 186 EATAGASVPGQGTTINV------ADTSGNTKKGCCST 216
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 160/217 (73%), Gaps = 7/217 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK++LIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ +G ALAE GL F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPK-KAGCCSS 223
E S G T+ + AD K GCCS+
Sbjct: 186 EATAGASVPGQGTTINV------ADTSGNTKKGCCST 216
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 156/197 (79%), Gaps = 6/197 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SKSTIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 75
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V IL+GNK DL
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDL 135
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R+V T + K AE +GLFF+ETSAL+++NV AF TV+TEIYNI+++K + +
Sbjct: 136 ESQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTA----- 190
Query: 192 KDSSSFNGKTVVLEGEK 208
D + NG + L G+K
Sbjct: 191 -DENQGNGNSASLSGQK 206
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 159/216 (73%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF+ SKSTIGVEF T+ + I GK +KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLV+DI++RQTFD++ RWL EL H+D N+V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G A +E +GL F+ETSAL++ NV AF TV++EI+ I+S+K + +Q
Sbjct: 126 KSDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + S G T+ + EA A K CCSS
Sbjct: 186 ESASTNGRSMQGTTINV----AEAPA-ATKGSCCSS 216
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 165/225 (73%), Gaps = 5/225 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M+ Y + ++ DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+
Sbjct: 1 MSNYVDFNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDN 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL EL H+D N+
Sbjct: 61 KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNI 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNK DL R V + + A+ + LFFMETSAL+S+NV AF TV+TEIY ++S
Sbjct: 121 VIMLIGNKCDLGSLRAVPIEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRVIS 180
Query: 181 RKVMISQELKQKDSSS--FNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + + E + +S G +++ G + A KK GCC S
Sbjct: 181 KKTLTANEELDTNGTSGLLKGTRIIVPGHDQ---APAKKGGCCMS 222
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 164/222 (73%), Gaps = 5/222 (2%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y E + DY+FKVVLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + ++ + +
Sbjct: 7 YGEVGQRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTI 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V +
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIM 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL R V T + K A + LFFMETSAL+++NV AF+T +TEIY +S+K
Sbjct: 127 LIGNKSDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKN 186
Query: 184 MISQELKQK--DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++ E +SS G +++ G++ A P KA CC S
Sbjct: 187 LVANEETDSSGNSSLLKGTKIIVPGQEP---APPAKAACCMS 225
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + ++ + +KAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTA 75
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V +L+GNKSDL
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNKSDL 135
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T + K A + LFFMETSAL+++NV AF+T +TEIY +S+K +++ E
Sbjct: 136 GTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVANEETD 195
Query: 192 K--DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+SS G +++ G++ A P KA CC S
Sbjct: 196 SSGNSSLLKGTKIIVPGQEP---APPAKAACCMS 226
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 162/216 (75%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ +G+ALAE +GL F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E G T+ + +A K+ GCCS+
Sbjct: 186 EAAVGTILPGQGTTINV----GDASGNTKR-GCCSA 216
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 167/221 (75%), Gaps = 7/221 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ SE+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAYRSEDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KLIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ R V+T +G+A +E +GL+FMETSAL+S NV +F+ ++T+IY ++S
Sbjct: 119 VVMLVGNKSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+K + E D S+ GK + K + A KK GCC
Sbjct: 179 KKALDVGE----DPSAVPGKGQTINVSKDDVTA-TKKVGCC 214
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 162/216 (75%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VL GDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ +G+ALAE +GL F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + +A K+ GCCS+
Sbjct: 186 EAAVGTTLPGQGTTINV----GDASGNTKR-GCCST 216
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 161/211 (76%), Gaps = 7/211 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++ TF+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + +A E +GL F+ETSAL+S+NV AFQ ++TEIY+I+S+K + S++ Q
Sbjct: 130 RHLRSVQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKKALASEDKPQ 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
D G +V+ + E E KK+ CCS
Sbjct: 190 PD----KGTRIVVSETQPE---EKKKSACCS 213
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 168/223 (75%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ SE+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAYRSEDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KLIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ R V+T +G+A +E +GL+FMETSAL+S NV +F+ ++T+IY ++S
Sbjct: 119 VVMLVGNKSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + E D S+ GK + K + A KK GCC +
Sbjct: 179 KKALDVGE----DPSAVPGKGQTINVSKDDVTA-TKKVGCCPA 216
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 163/211 (77%), Gaps = 2/211 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + ++ K VKAQIWDTA
Sbjct: 13 DYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVDHKTVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + +WL EL H+D N+V +LVGNKSDL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V + K A+ + LFFMETSAL+++NV +AF +V+TEIY ++S+K +++ +
Sbjct: 133 ESLRAVPIEDAKEFAQKENLFFMETSALEATNVESAFISVLTEIYRVVSKKSLVANDEYG 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
++S G +V+ G++ E A + CCS
Sbjct: 193 GNNSLLKGNKIVIPGQEPEMQA--TNSSCCS 221
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 163/223 (73%), Gaps = 5/223 (2%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y + ++ DY+FKVVLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 4 LYGDFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKA 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL EL H+D N+V
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNKSDL R V T + + AE + LFFMETSAL+++NV AF TV+T+IY I+S+K
Sbjct: 124 MLIGNKSDLGSLRAVPTEDAQEFAERENLFFMETSALEATNVETAFLTVLTDIYKIISKK 183
Query: 183 VMISQELKQKDSSS--FNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + SS G +++ G D+ +K GCC S
Sbjct: 184 TLTANTDTDSTGSSTLLKGTKIIVPG---GPDSAAQKGGCCGS 223
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 163/217 (75%), Gaps = 7/217 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + ++GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDLK R V +G ALAE +GL F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLKHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKA-GCCSS 223
E + G T+ + ADA + GCCS+
Sbjct: 186 EAAANSTVPGQGTTINV------ADASGNTSKGCCST 216
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 160/217 (73%), Gaps = 7/217 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + ++GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVILMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G+ALAE + L F+ETSAL+++NV AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVAEEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPK-KAGCCSS 223
E + G T+ + AD K CCS+
Sbjct: 186 EAAGNSTLPGQGTTINV------ADTSGNTKRSCCST 216
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 165/226 (73%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+T+IYNI+S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K M + S V +GEK + + KK GCCSS
Sbjct: 180 KKAM-------ETSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 162/216 (75%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + G+ VKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGA+GALLVYD+++ TF+++ RWL EL H+D N+V +L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DLK R V T + ++ AE +GL F+ETSAL+++NV AFQT+++EIY I+S+K + S+
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKKTLSSE 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E S +GKT+V+ G D KK CCSS
Sbjct: 186 E-SAAPVSVKDGKTIVVGG----PDPSTKKTTCCSS 216
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 163/222 (73%), Gaps = 5/222 (2%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y E + DY+FKVVLIGDSAVGKS LLA FAR+EF +SK+TIGVEFQT+ + I+ + V
Sbjct: 8 YGEVGQKIDYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHIDARTV 67
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQ DTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V +
Sbjct: 68 KAQTRDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL R V T + K AE + LFFMETSAL+S+N+ AF TV+TEIY I+S+K
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNLENAFMTVLTEIYRIVSKKN 187
Query: 184 MISQEL--KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++ E +SS G +V+ G++ A P KA CC S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEP---APPTKASCCMS 226
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/226 (57%), Positives = 165/226 (73%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+T+IYN++S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K M + S V +GEK + + KK GCCSS
Sbjct: 180 KKAM-------ETSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 162/216 (75%), Gaps = 4/216 (1%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYD+++RQTF+++ RWL EL H+D N+V +++GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ +G+ +AE +GL F+ETSALD++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + + + + GCCSS
Sbjct: 186 EAAASITHPGQGTTINVS----DTSGDSNRRGCCSS 217
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/225 (56%), Positives = 168/225 (74%), Gaps = 13/225 (5%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y+E D DY+FKVVLIGDSAVGKS LLARF+R+EF SK+TIGVEFQT+ + ++ K +
Sbjct: 5 YNEYDNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDHKTI 64
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI+++Q+FD + RWL EL H+D N+V +
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIM 124
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL + R+V T + AE + L F+ETSA++S+NV AF TV++EIY ++S+K
Sbjct: 125 LIGNKSDLSNLRQVETDTAREFAEKESLSFLETSAMESTNVETAFFTVLSEIYKVVSKKA 184
Query: 184 MISQELKQKDSSSFNGKTVVLEGEK-KEADAE----PKKAGCCSS 223
+++ E + G + +L G K K AD + KKAGCCSS
Sbjct: 185 LLADENQ--------GNSPLLPGTKIKLADKDDVIGAKKAGCCSS 221
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 162/213 (76%), Gaps = 3/213 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 13 DYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQTFD + RWL EL H+D N+V +L+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNNIVIMLIGNKCDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK- 190
+ R V + + A+ +GLFF+ETSAL++ NV +AF TV+T+IY I+S+K +I+ + +
Sbjct: 133 GNLRAVPIEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYRIISKKALIANDDQG 192
Query: 191 QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+S+ G +V+ GE E D CCSS
Sbjct: 193 NGNSALLTGTKLVVPGE--EQDVSTNNKYCCSS 223
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 161/216 (74%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G+ LAE +GL F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + +A K+ GCCS+
Sbjct: 186 EAGVGTTLPGQGTTINV----GDASGNTKR-GCCST 216
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 165/221 (74%), Gaps = 15/221 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKA
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V T EGKA AE + L+FMETSAL+S+NV AF V+T+IY I+S++ +
Sbjct: 126 GNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRAVE 185
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
+ E D++S GK GEK K+ + KK GCCSS
Sbjct: 186 AGE----DAASGPGK-----GEKINIKDDVSAVKKGGCCSS 217
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 165/226 (73%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+T++YN++S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K M + S V +GEK + + KK GCCSS
Sbjct: 180 KKAM-------ETSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 165/226 (73%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV +F V+T+IYN++S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVIS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K M + S V +GEK + + KK GCCSS
Sbjct: 180 KKAM-------ETSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 164/212 (77%), Gaps = 6/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGA+GALLVYD+++ TFD++ RWL EL H+D N+V +L+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T + ++ AE +GL F+ETSAL+++NV AFQT+++EIY I+S+K + S+E
Sbjct: 130 KHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPAA 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ GKT+V+ E++A KKA CCSS
Sbjct: 190 ANNIK-EGKTIVV----GESEANTKKA-CCSS 215
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 162/216 (75%), Gaps = 9/216 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ K VKAQIWDTA
Sbjct: 14 DYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQIWDTA 73
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + +WL EL H+D N+V +L+GNKSDL
Sbjct: 74 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGNKSDL 133
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T + K A+ + LFFMETSAL+++NV +AF +V+TEIY ++S+K +I+ E +
Sbjct: 134 GTLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIANEQES 193
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG----CCSS 223
SSS T ++ E+ EP G CC +
Sbjct: 194 GGSSSLLKGTNIVVPEQ-----EPVSGGRSFSCCGT 224
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 54 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 113
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 114 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 173
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 174 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 231
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
D+S N VV + +P K CC
Sbjct: 232 NDTSPSNN--VVPIHVPPTTENKP-KVQCC 258
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 161/211 (76%), Gaps = 4/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ TF+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R+V T +A E +GL F+ETSAL+S+NV AFQ ++TEIY+I+S+KV+ S++ +
Sbjct: 130 KHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRP 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
K G+ V++ + D KK GCCS
Sbjct: 190 KIGE---GRDVIVI-DNAHDDGGKKKGGCCS 216
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 161/211 (76%), Gaps = 7/211 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ TF+++GRWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V+T + ++ AE +GL F+ETSAL+++NV AFQT++ EI+ I+S+K + S+E
Sbjct: 130 KHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKKALASEE--A 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ GKT+V+ + D KKA CCS
Sbjct: 188 AGAGIKEGKTIVV----ADPDTNTKKA-CCS 213
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 166/223 (74%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ S++D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++
Sbjct: 1 MAYRSDDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDS 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI+R TF+++ RWL EL H+D N+
Sbjct: 59 KLIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKS L+ R V+ +G++ +E +GLFFMETSAL+S+NV AF+ ++T+IY ++S
Sbjct: 119 VVMLVGNKSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + E D S+ GK + K+ KK GCCS+
Sbjct: 179 KKALDVGE----DPSAVPGKGQTISVGNKDDVTATKKVGCCSA 217
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 166/220 (75%), Gaps = 7/220 (3%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMD---INGKE 62
++D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK
Sbjct: 4 KQDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVDGKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++ TF+++ RWL EL H+D N+V
Sbjct: 64 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADANIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+LVGNKSDLK R+V T +A E +GL F+ETSALDS+NV AFQ ++TEIY+I+S+K
Sbjct: 124 MLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIVSKK 183
Query: 183 VMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
V+ S++ + K G+ +++ +K+ D KK GCCS
Sbjct: 184 VLDSEDNRPKIG---EGRDLIVI-DKQHDDGAKKKGGCCS 219
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARFAR++F +SK+TIGVEFQT+ ++I+ + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTA 74
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V +L+GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKSDL 134
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V + K AE + LFFMETSAL++ NV AF TV+TEIY +S+K +++ E
Sbjct: 135 GTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANEEPD 194
Query: 192 K--DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+SS G +V+ G++ + KA CC S
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPSTL---KATCCMS 225
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 164/221 (74%), Gaps = 15/221 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKA
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V T EGKA AE + L+FMETSAL+S+NV AF V+T+IY I+S++ +
Sbjct: 126 GNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKRAVE 185
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
+ E DS+S GK GEK K+ + KK GCCSS
Sbjct: 186 AGE----DSASGPGK-----GEKINMKDDVSAVKKGGCCSS 217
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 129/226 (57%), Positives = 169/226 (74%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV +F V+T+IY+I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAE---PKKAGCCSS 223
+K M + D ++ +V +GEK + + KKAGCCSS
Sbjct: 180 KKAM-----EAGDGTA--AASVPPKGEKIDVSKDVSAVKKAGCCSS 218
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 167/221 (75%), Gaps = 15/221 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++GK +KA
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKA 68
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TFD++GRWL EL H+D ++V +L+
Sbjct: 69 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLI 128
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V+T +GK AEA+ ++FMETSALD++NV AF V+T+IY I+++K +
Sbjct: 129 GNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVE 188
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
+ E D S+ GK GEK K+ + K+ GCCS+
Sbjct: 189 APE----DGSAGPGK-----GEKINVKDDVSAMKRVGCCSN 220
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 167/221 (75%), Gaps = 15/221 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++GK +KA
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKA 68
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TFD++GRWL EL H+D ++V +L+
Sbjct: 69 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLI 128
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V+T +GK AEA+ ++FMETSALD++NV AF V+T+IY I+++K +
Sbjct: 129 GNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVE 188
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
+ E D S+ GK GEK K+ + K+ GCCS+
Sbjct: 189 APE----DGSAGPGK-----GEKINVKDDVSAMKRVGCCSN 220
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 158/219 (72%), Gaps = 11/219 (5%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + I+GK VKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLV+DI++RQTFD++ RWL EL H+D N+V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V + +A +E + L F+ETSAL++ NV AF TV++EI+ I+S+K + +Q
Sbjct: 126 KSDLNHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPK---KAGCCSS 223
E + S G T+ + AEP K CCSS
Sbjct: 186 ESASANGRSMQGTTINV--------AEPSTNTKGSCCSS 216
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 159/212 (75%), Gaps = 6/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AFQT++TEIY I+S+K M E ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM--SERQE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N V+ + + + +PK CC +
Sbjct: 187 SDMSPSNN---VVNIQVQPTENKPKMQ-CCQN 214
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/221 (55%), Positives = 164/221 (74%), Gaps = 6/221 (2%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y + ++ DY+FKVVLIGDSAVGK+ LLARF+R+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 4 LYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL EL H+D N+V
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL R V T + + AE + LFFMETSAL+S+NV AF T++TEIY I+S+K
Sbjct: 124 MLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKK 183
Query: 183 VMISQELKQKDSSS--FNGKTVVLEGEKKEADAEPKKAGCC 221
+ + E S+ F G ++V+ G+ D + + GCC
Sbjct: 184 SLAAGEEIDIGSNPALFKGTSIVVPGQ----DQDSGRKGCC 220
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 163/220 (74%), Gaps = 3/220 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y+E D DY+FKVVLIGDSAVGKS LL+RF+R+EF SK+TIGVEFQT+ + ++ K +
Sbjct: 5 YNEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTI 64
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA++VYDI++ Q+FD + RWL EL H+D N+V +
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADANIVIM 124
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL + R+V T + AE QGL F+ETSA++S+NV AF TV++EIY +S+K
Sbjct: 125 LIGNKSDLSNLRQVETDTAREYAEKQGLSFLETSAMESTNVETAFFTVLSEIYKTVSKKA 184
Query: 184 MISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+I+ E Q + G + L K+ KKAGCCSS
Sbjct: 185 LIADE-NQGGAPLLPGTKITL--TDKDDVIGTKKAGCCSS 221
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 165/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ S++D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++
Sbjct: 1 MAYRSDDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDS 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI+R TF+++ RWL EL H+D N+
Sbjct: 59 KLIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKS L+ R V+ +G++ +E +GLFFMETSAL+S+NV AF+ + T+IY ++S
Sbjct: 119 VVMLVGNKSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + E D S+ GK + K+ KK GCCS+
Sbjct: 179 KKALDVGE----DPSAVPGKGQTISVGNKDDVTATKKVGCCSA 217
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 157/210 (74%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 54 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 113
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 114 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 173
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 174 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 231
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
D S N VV + +P K CC
Sbjct: 232 NDMSPSN--NVVPIHVPPTTENKP-KVQCC 258
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 160/216 (74%), Gaps = 7/216 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF+++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G++LAE +GL F+ETSAL+++N+ AFQT+++EIY+I+S+K + +Q
Sbjct: 126 KSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + + G+ + A + GCCS+
Sbjct: 186 EA----AGNLPGQGTAINISDSSA---TNRKGCCST 214
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 166/221 (75%), Gaps = 4/221 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M+ Y + ++ DY+FK+VLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + ++
Sbjct: 1 MSNYVDYNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHN 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL EL H+D ++
Sbjct: 61 KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKSI 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
+ +L+GNK DL R V + K A+ + LFFMETSAL+++NV AF T++TEIY I+S
Sbjct: 121 IIMLIGNKCDLGSLRAVPAEDAKEFAQRENLFFMETSALEATNVETAFLTMLTEIYRIIS 180
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
++ + + ++S +F G +++ +++ ++ K GCC
Sbjct: 181 KRTLAGNDESNENSGAFKGTRILVPSQEQNSE----KKGCC 217
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/224 (59%), Positives = 165/224 (73%), Gaps = 13/224 (5%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A Y EED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK
Sbjct: 3 AGYREEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGK 61
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V
Sbjct: 62 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIV 121
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNKSDL+ V T EGKA AE + L+FMETSAL+S+NV AF V+T+IY I+S+
Sbjct: 122 VMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSK 181
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCS 222
+ + + + D+ S GK GEK K+ + KK GCCS
Sbjct: 182 RSVEAGD----DAGSGPGK-----GEKINIKDDVSAVKKGGCCS 216
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 164/224 (73%), Gaps = 11/224 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ +++N
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNE 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T + K+ AE + L+FMETSAL+S+NV AF V+T+IY+++S
Sbjct: 120 VVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP-KKAGCCSS 223
+K M + E DS + K GEK + D KK GCCS+
Sbjct: 180 KKAMEAGE----DSGNVPSK-----GEKIDVDVSAVKKTGCCSN 214
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 159/216 (73%), Gaps = 6/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + I GK +KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI+++QTF++I RWL EL H+D N+V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G+ALAE +GL F+ETSAL++ NV AFQTV+++I+ I+S+K + +Q
Sbjct: 126 KSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E S G+ + A+ K GCCSS
Sbjct: 186 EAA---GSGPPGQGTTINVADSSANM---KGGCCSS 215
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 6/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AFQT++TEIY I+S+K M E ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM--SERQE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N V+ + + +PK CC +
Sbjct: 187 SDMSPSNN---VVNIQVPPTENKPKMQ-CCQN 214
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 160/210 (76%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + K+ AE L F+ETSALD++NV AFQ ++TEIY+I+S+K +++ +
Sbjct: 130 RHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQKTIVNDDHVA 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K +S N +T+ + EA + KK GCC
Sbjct: 190 KVPTS-NVQTITV--APSEATDDKKKGGCC 216
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 6/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AFQT++TEIY I+S+K M + +
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM--SDRRD 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N V+ + + + +PK CC S
Sbjct: 187 NDMSPSNN---VVSIQVQPTENKPKMQ-CCQS 214
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 168/226 (74%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV +AF V+T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K M E + ++S V +GEK + + K+ GCCSS
Sbjct: 180 KKAM---ETGDEAAAS----AVPSKGEKIDVSKDVSAMKRVGCCSS 218
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 157/215 (73%), Gaps = 4/215 (1%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL+ R V T E KA AE L F+ETSALDS+NV AFQ ++TEIY I+S+K I
Sbjct: 124 NKSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQK-QIR 182
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
++S S N +T+ + AD KK CC
Sbjct: 183 DSPDDENSPSNNVQTITVAPTDNSAD---KKQKCC 214
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 157/216 (72%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF +SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V +L GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIMLAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ + + LAE +GL F+ETSAL++SNV AFQT++ +IY I+S+K + +Q
Sbjct: 126 KSDLNHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKKALTAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + + K CCS+
Sbjct: 186 E-AANSTGLPQGTTITI----ANLSSNINKRACCSN 216
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 160/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++ TF+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + KA E +GL F+ETSAL+++NV AFQ ++TEIY+I+S+K + S++
Sbjct: 130 RHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKKALASEDGPA 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+S G + + EA KK+ CCSS
Sbjct: 190 AAPTS--GTAIKVTEAAPEAK---KKSTCCSS 216
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 164/221 (74%), Gaps = 15/221 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++GK +KA
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKA 68
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TFD++GRWL EL H+D ++V +LV
Sbjct: 69 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLV 128
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V+T + K AEA+ ++FMETSALD++NV ++F V+T+IY I+S+K +
Sbjct: 129 GNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVE 188
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
+ E G +GEK K+ + K+ GCCS+
Sbjct: 189 ASE---------EGAAAPGKGEKINVKDDVSAMKRVGCCSN 220
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/219 (56%), Positives = 160/219 (73%), Gaps = 12/219 (5%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK +KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI+++QTF++I RWL EL H+D N+V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G+ALAE +GL F+ETSAL++ NV AFQTV+++I+ I+S+K + +Q
Sbjct: 126 KSDLNHLRSVAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPK---KAGCCSS 223
E G T+ + A+P K GCCSS
Sbjct: 186 EAAGSGPPG-QGTTINI--------ADPSANTKRGCCSS 215
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 156/210 (74%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + E Q
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGEGSQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ G+ VLE K ADAE KK GCC
Sbjct: 187 ---NVLGGERKVLE-ISKSADAEQKK-GCC 211
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 153/212 (72%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE GL F+ETSALDSSNV AFQT++T IYNI+S++ ++
Sbjct: 129 RHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQR-----QMSG 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S F+ + V+ + K CC S
Sbjct: 184 RSDSDFSPASNVVPITVEPTQNSSNKGACCQS 215
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 153/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS GKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 226 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 285
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 286 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 345
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + S +
Sbjct: 346 RHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDDVI 405
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K S G+T+ ++ + A KK GCC
Sbjct: 406 KPS---GGETITVQPSADDGGAT-KKNGCC 431
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +PK CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKPKMQ-CCQN 215
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 164/221 (74%), Gaps = 15/221 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKA
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V T EGKA AE + L+FMETSAL+S+NV AF V+ +IY I+S++ +
Sbjct: 126 GNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKRAVE 185
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
+ E D++S G+ GEK K+ + KK GCCSS
Sbjct: 186 AGE----DAASGPGR-----GEKINIKDDVSAVKKGGCCSS 217
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 130 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +PK CC +
Sbjct: 188 NDMSPSNN--VVPIHVPPTTENKPKMQ-CCQN 216
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 168/222 (75%), Gaps = 4/222 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FK+VLIGDS VGKS +L+R+AR+EF +SK+TIGVEFQT+ + I+ K V
Sbjct: 7 YGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD++RRQTFD I RWL EL ++D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNKSDL+D R ++ + K AE +GLFF+ETSAL++ NV +AF TV+TEI+NI+++K
Sbjct: 127 LVGNKSDLEDQRAISMEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLTEIFNIVNKKS 186
Query: 184 MISQELK-QKDSSSFNGKTV-VLEGEKKEADAEPKKAGCCSS 223
+++ E + D S GK + ++ G + + K CC++
Sbjct: 187 LVAGEGEGNGDPGSLAGKKIDIVPGPGQVIPTKNKL--CCNT 226
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 155/212 (73%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + I+GK VKAQIWDTA
Sbjct: 139 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIWDTA 198
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++Q+FDS+ RWL EL H+D N+V ++VGNKSDL
Sbjct: 199 GQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGNKSDL 258
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V +G+A +E +GL F+ETSAL++ NV AF T+++EI+ +S+K + +Q
Sbjct: 259 NHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAAQASAS 318
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S G T+ + + K CCSS
Sbjct: 319 TNGRSMQGTTINV-----AESSTVTKGSCCSS 345
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 160/215 (74%), Gaps = 6/215 (2%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R++F SKSTIGVEF T+ + + K +KAQ
Sbjct: 3 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKAQ 62
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDIS+ T++++ RWLNEL H+D N+V +LVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLVG 122
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL+ R V T + ALAE GL F+ETSALDS+NV AFQ ++TEI++I++
Sbjct: 123 NKSDLRHLRAVPTEQAAALAEKHGLSFIETSALDSTNVELAFQKILTEIFHIVNGG---K 179
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
Q +KDS S +G+T V++ D PKKAG C
Sbjct: 180 QLETKKDSQSVDGETEVVQ---VGGDPAPKKAGAC 211
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 170/226 (75%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M+ Y ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++G
Sbjct: 1 MSAYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R T++++ +WL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T + K+ AE + L+FMETSAL+++NV AF V+T+IY+I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEAD---AEPKKAGCCSS 223
+K M + + D+++ V+ +GEK + +E KK GCCSS
Sbjct: 180 KKAMETND----DAAA---SAVIAKGEKIDISKDVSEVKKGGCCSS 218
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 161/216 (74%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF+++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R ++ +G++LAE +GL F+ETSAL++SN+ AFQ++++EIY+I+S+K + +Q
Sbjct: 126 KSDLNHLRSISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E S + G+ + A + GCCS+
Sbjct: 186 E--AAGSMAVPGQGTAINISDTYA---TNRRGCCST 216
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 155/212 (73%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N V+ K CC +
Sbjct: 187 NDMSPSNN---VVPIHVPPTTGNKPKMQCCQN 215
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 167/226 (73%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K M E + ++S V +GEK + + K+ GCCSS
Sbjct: 180 KKAM---ETGDEGAAS----AVPSKGEKIDVSKDVSAMKRVGCCSS 218
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 162/210 (77%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGA+GALLVYD+++ TFD++ RWL EL H+D N+V +L+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T + ++ AE +GL F+ETSAL+++NV AFQT+++EIY I+S+K + S+E
Sbjct: 130 KHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPAA 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
++ GKT+V+ E++A KKA CC
Sbjct: 190 ANNIK-EGKTIVV----GESEANTKKA-CC 213
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 161/217 (74%), Gaps = 8/217 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + I GK +KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI+++QTF++I RWL EL H+D N+V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G+ALAE +GL F+ETSAL++ NV AFQT++++I+ I+S+K + +Q
Sbjct: 126 KSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPK-KAGCCSS 223
E + G T+ + AD+ K GCCS+
Sbjct: 186 EAAGSGPPT-QGTTINV------ADSSGNTKKGCCST 215
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--S 182
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ ++ D S N VV + +P K CC
Sbjct: 183 DRRENDMSPSNN--VVPIHVPPTTENKP-KVQCC 213
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/224 (57%), Positives = 164/224 (73%), Gaps = 11/224 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ +++N
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNE 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T + K+ AE + L+FMETSAL+S+NV AF V+T+IY+++S
Sbjct: 120 VVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP-KKAGCCSS 223
+K M + + DS + K GEK + D KK GCCS+
Sbjct: 180 KKAMEAGQ----DSGNVPSK-----GEKIDVDVSAVKKTGCCSN 214
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 166/225 (73%), Gaps = 14/225 (6%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A+ +E+D DYLFK V+IGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++GK
Sbjct: 8 AYRAEDDY--DYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGK 65
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TFD++ RWL EL H+D ++V
Sbjct: 66 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSSIV 125
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNKSDL+ V+T +G+ AEA+ L+FMETSALD++NV AF V+T+IY I SR
Sbjct: 126 VMLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASR 185
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
K + + + +G + +GE K+ + K+AGCCSS
Sbjct: 186 KTVDAGD---------DGSSAPSKGENINVKDDVSSLKRAGCCSS 221
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 166/225 (73%), Gaps = 14/225 (6%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A+ +E+D DYLFK V+IGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++GK
Sbjct: 8 AYRAEDDY--DYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGK 65
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TFD++ RWL EL H+D ++V
Sbjct: 66 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIV 125
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNKSDL+ V+T +G+ AEA+ L+FMETSALD++NV AF V+T+IY I SR
Sbjct: 126 VMLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASR 185
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
K + + + +G + +GE K+ + K+AGCCSS
Sbjct: 186 KTVDAGD---------DGSSAPSKGENINVKDDVSSLKRAGCCSS 221
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 167/223 (74%), Gaps = 8/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ ++D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAYKVDDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI+R TF+++ RWL EL H++ N+
Sbjct: 59 KMIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ R V+T + + AE +GL+F+ETSAL+S+NV AF+ V+T+IY I+S
Sbjct: 119 VVMLVGNKSDLRHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + E ++ G+T+ + K+ KK GCCS+
Sbjct: 179 KKALDVSE--DNAAAPPQGQTINV----KDDVTATKKVGCCST 215
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 161/213 (75%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ TF+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + + AE + L F+ETSALDS+NV AFQT++TEIY ++SR+ M + E
Sbjct: 128 RHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIYRLVSRRPMEAGE--S 185
Query: 192 KDSSSF-NGKTVVL--EGEKKEADAEPKKAGCC 221
DS S G+ V++ E E K A+ + K +G C
Sbjct: 186 GDSPSVGQGEKVIVSREDETKAAERKSKCSGSC 218
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/226 (56%), Positives = 168/226 (74%), Gaps = 12/226 (5%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ +D++
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDS 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R+ TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+T+IY+I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
+K + E+ + ++S K GEK K + K+ GCCSS
Sbjct: 180 KKAV---EVAENGTTSVPAK-----GEKIDLKNDVSALKRVGCCSS 217
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 159/215 (73%), Gaps = 3/215 (1%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL+ R V T E KA AE L F+ETSALDS+NV AFQ ++TEIY+I+S+K I
Sbjct: 124 NKSDLRHLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNILTEIYHIVSQK-QIR 182
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+S S N +T+ + +AD + KK CC
Sbjct: 183 DSPGDDESPSTNVQTITV-APTTDADTK-KKLACC 215
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 152/210 (72%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V E KALAE GL F+ETSALDSSNV AFQT++T IYNI+S++ M
Sbjct: 129 RHLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMTG----- 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + F+ + V+ + K + CC
Sbjct: 184 RSDTDFSPNSNVVPITVQPTQNAAKSSACC 213
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 155/212 (73%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + I+GK VKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++Q+FDS+ RWL EL H+D N+V ++VGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V +G+A +E +GL F+ETSAL++ NV AF T+++EI+ +S+K + +Q
Sbjct: 130 NHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAAQASAS 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S G T+ + + K CCSS
Sbjct: 190 TNGRSMQGTTINV-----AESSTVTKGSCCSS 216
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 159/214 (74%), Gaps = 5/214 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSA GKS LLARFAR++F +SK+TIGVEFQT+ ++I+ + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTA 74
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V +L+GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKSDL 134
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V + K AE + LFFMETSAL++ NV AF TV+TEIY +S+K +++ E
Sbjct: 135 GTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANEEPD 194
Query: 192 K--DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+SS G +V+ G++ + KA CC S
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPSTL---KATCCMS 225
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 161/216 (74%), Gaps = 7/216 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGA+GALLVYD+++ TF+++ RWL EL H+D N+V +L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DLK R V T + + AE +GL F+ETSAL+++NV AFQT+++EIY I+S+K + S+
Sbjct: 126 KTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLTSE 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + GK +V+ G ++A KK CCSS
Sbjct: 186 EPAPANIK--EGKMIVVGG----SEANTKKP-CCSS 214
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 160/210 (76%), Gaps = 7/210 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARF+R+EF SK+TIGVEFQT+ M ++ K +KAQIWDTA
Sbjct: 12 DYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWDTA 71
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI++R TF+ + RWL EL H+D N+V +LVGNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGNKSDL 131
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+ E K LAE + LFFMETSAL+++NV +AF +V+TEIY I+S+K + S+
Sbjct: 132 GNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSL-SEGAGG 190
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
G T++L EKKE+ K GCC
Sbjct: 191 SQQVPIPGTTLLL-SEKKES-----KTGCC 214
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 163/221 (73%), Gaps = 15/221 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++GK +KA
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKA 68
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TFD++GRWL EL H+D ++V +LV
Sbjct: 69 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVVMLV 128
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V+T + K AEA+ ++FMETSALD++NV ++F V+T+IY I+S+K +
Sbjct: 129 GNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVE 188
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
E G +GEK K+ + K+ GCCS+
Sbjct: 189 VPE---------EGAVAPGKGEKINVKDDVSAMKRVGCCSN 220
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 163/220 (74%), Gaps = 15/220 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKA
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V T EGKA AE + L+FMETSAL+S+NV AF V+T+IY I+S++ +
Sbjct: 126 GNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVE 185
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCS 222
+ + D+ S GK GEK K+ + KK GCCS
Sbjct: 186 AGD----DAGSGPGK-----GEKINIKDDVSAVKKGGCCS 216
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 158/219 (72%), Gaps = 11/219 (5%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+T + ++LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAG---CCSS 223
E N T + +G AG CCS+
Sbjct: 186 EA--------NSSTGLPQGTTINVSNMSSNAGNRSCCSN 216
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 152/210 (72%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDSSNV AFQT++T IYNI+S++ ++
Sbjct: 129 RHLRAVPTDEARAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQR-----QMSG 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ S F+ + V+ + K CC
Sbjct: 184 RTDSDFSPASNVVPISVEPTQTSSSKGSCC 213
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 158/216 (73%), Gaps = 6/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + I GK +KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI+++QTF++I RWL EL H+D N+V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G+ALAE +GL F+ETSAL++ NV AFQT++ +I+ I+S+K + +Q
Sbjct: 126 KSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + A K GCCSS
Sbjct: 186 EAAGSGPPT-QGTTINVTD-----SAVNTKRGCCSS 215
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 160/210 (76%), Gaps = 7/210 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARF+R+EF SK+TIGVEFQT+ M ++ K +KAQIWDTA
Sbjct: 12 DYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWDTA 71
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI++R TF+ + RWL EL H+D N+V +LVGNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGNKSDL 131
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+ E K LAE + LFFMETSAL+++NV +AF +V+TEIY I+S+K + S+
Sbjct: 132 GNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSL-SEGAGG 190
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
G T++L EKKE+ K GCC
Sbjct: 191 SQQIPIPGTTLLL-SEKKES-----KTGCC 214
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 161/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T + + +E +GL F+ETSAL+++NV AFQ+++TEIY I+S+K + S++
Sbjct: 130 KHLRGVATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKKALASEDPVL 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
GK +++ E+ DA KK CCS+
Sbjct: 190 VGPG--EGKAIIVGPEQ---DANTKKKACCST 216
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 160/216 (74%), Gaps = 6/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDLK R V+T + +A +E +GL F+ETSAL+S+NV AFQ ++TEIY I+S+K + S+
Sbjct: 126 KSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASE 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E G +V +++A K GCCS+
Sbjct: 186 E--NTTEGPGQGTNIV----PLDSNAPDLKKGCCSA 215
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 165/225 (73%), Gaps = 14/225 (6%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A+ +E+D DYLFK V+IGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++GK
Sbjct: 9 AYRAEDDY--DYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGK 66
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TFD++ RWL EL H+D ++V
Sbjct: 67 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIV 126
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNKSDL+ V+T +G+ AEA+ L+FMETSALD++NV AF V+T+IY I SR
Sbjct: 127 VMLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQIYQIASR 186
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
K + + E +G +GEK K+ + K+ GCCS+
Sbjct: 187 KTVDAGE---------DGSAAPSKGEKINVKDDVSALKRVGCCSN 222
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 160/216 (74%), Gaps = 4/216 (1%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + I+GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K DLK R V+ +G+ LAE + L F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KCDLKHLRAVSEEDGQGLAEREELSFLETSALEATNIEKAFQTILTEIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + +A K CCS+
Sbjct: 186 EAAASTALPGQGTTINV----NDASGNQNKKTCCST 217
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 165/224 (73%), Gaps = 10/224 (4%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y + ++ DY+FKVVLIGDSAVGK+ LLARF+R++F +SK+TIGVEFQT+ + I+ K
Sbjct: 4 LYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL EL H+D N+V
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL + V T + + A+ + LFFMETSAL+S+NV AF T++TEIY ++S+K
Sbjct: 124 MLIGNKCDLGTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKK 183
Query: 183 VMISQELKQKDSSSFNGKTVVLEGEK-----KEADAEPKKAGCC 221
+ + D + G + +L+G + ++A A KK GCC
Sbjct: 184 TLTAN-----DEADPGGGSGLLKGTRIIVPNQDASAYEKKGGCC 222
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 156/212 (73%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTTKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE GL F+ETSALDS+NV AFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +PK CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKPKMQ-CCQN 215
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 163/220 (74%), Gaps = 5/220 (2%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y + ++ DY+FKVVLIGDSAVGK+ LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 4 LYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + +WL EL H+D N+V
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL R V T + + A+ + LFFMETSAL+++NV AF T++TEIY I+S+K
Sbjct: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKK 183
Query: 183 VMISQELKQKDSSS-FNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + +SS G +++ E++ K+ GCC
Sbjct: 184 SLTADDDDADGNSSLLKGTRIIIPSEQESG----KRGGCC 219
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 167/223 (74%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +E+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRAEDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+ + KA AE + FFMETSAL++ NV +AF V+T+IY ++S
Sbjct: 119 VIMLVGNKADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K+ + KKAGCCSS
Sbjct: 179 KKAL---DIGDDPAAPPRGQTINVGG--KDDVSAVKKAGCCSS 216
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 130/221 (58%), Positives = 163/221 (73%), Gaps = 15/221 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKA
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V T EGKA AE + L+FMETSAL+S+NV AF V+ +IY I+ ++ +
Sbjct: 126 GNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKRAVE 185
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
+ E D++S G+ GEK K+ + KK GCCSS
Sbjct: 186 AGE----DAASGPGR-----GEKINIKDDVSAVKKGGCCSS 217
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 163/221 (73%), Gaps = 15/221 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFK VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++GK VKA
Sbjct: 10 RAEDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKA 69
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TFD++ RWL EL H+D ++V +LV
Sbjct: 70 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLV 129
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V+T +GK AEA+ L+FMETSALD++NV AF V+T+IY +S+K +
Sbjct: 130 GNKSDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTV- 188
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
+S +G ++GEK K+ + K+ GCCS+
Sbjct: 189 --------EASDDGSNAPIKGEKINVKDDVSALKRIGCCSN 221
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 7 YGDSSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
L+GNK+DL++ R V T + K AE +GLFF+ETSAL+++NV AF TV+TEI+NI+++K
Sbjct: 127 LIGNKTDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKK 185
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 166/221 (75%), Gaps = 15/221 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++GK +KA
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKA 68
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TFD++GRWL EL H+D ++V +L+
Sbjct: 69 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLI 128
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V+T + K AEA+ ++FMETSALD++NV AF V+T+IY I+S+K +
Sbjct: 129 GNKSDLRHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQIVSKKTVE 188
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCSS 223
+ E + ++ GK GEK K+ + K+ GCCS+
Sbjct: 189 ALE----EGAAGPGK-----GEKINVKDDVSAMKRVGCCSN 220
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 157/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALD +NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 154/213 (72%), Gaps = 9/213 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++ TFD++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T ++ AE L FMETSALD+SNV AAFQ+++T+IY I+S K L Q
Sbjct: 130 KHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKA-----LDQ 184
Query: 192 KDSSSFN-GKTVVLEGEKKEADAEPKKAGCCSS 223
G + K E E K GCC+S
Sbjct: 185 NQGPGLTPGPRETITVSKSE---EKKNGGCCAS 214
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 156/210 (74%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS GKSNLL+RF R+EF +S+STIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSALD+SNV AFQ ++TEIY+I+S K + S +
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSSDDVI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K S G+T+ ++ + + KK GCC
Sbjct: 188 KPSG---GETISVQPSTDDG-GQTKKGGCC 213
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 162/221 (73%), Gaps = 4/221 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M+ Y + ++ DY+FK+VLIGDSAVGKS LARFAR+EF +SK+TIGVEFQT+ + ++
Sbjct: 1 MSNYVDYNQKIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDN 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL EL H+D ++
Sbjct: 61 KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKSI 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
+ +L+GNK DL R V T + + A+ + LFFMETSAL+++NV AF TV+TEIY I+S
Sbjct: 121 IIMLIGNKCDLGSLRAVPTEDAEEFAQRENLFFMETSALEATNVETAFWTVLTEIYRIIS 180
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+K + + + F G +++ + + ++ K GCC
Sbjct: 181 KKTLAGNDKSDGNPGVFKGTRILVPSQAQNSE----KKGCC 217
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 158/211 (74%), Gaps = 6/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V+T E KA A QGL F+ETSALD+SNV +AFQ ++T+IY I+S K + S
Sbjct: 128 KHLRAVSTEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
K S G+T+++ D K+ G CC
Sbjct: 188 KPS---GGETILV--TPTADDGGAKQGGKCC 213
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 165/224 (73%), Gaps = 10/224 (4%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y E + DY+FKVVL+GDSAVGK+ LLARFA+++F +SK+TIGVEFQT+ + I+ K
Sbjct: 4 LYGEYNHKIDYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD++RR +FD++ +WL EL H+D N+V
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKNIVV 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL R V T + + A+ + LFFMETSAL+S+NV AF T++TEIY ++S+K
Sbjct: 124 MLIGNKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLVSKK 183
Query: 183 VMISQELKQKDSSSFNGKTVVLEGEK-----KEADAEPKKAGCC 221
+ + + D S +G +L+G K ++ +A KK GCC
Sbjct: 184 TLTAND--DADPSGISG---LLKGTKIIVPSQDINAGEKKGGCC 222
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 163/226 (72%), Gaps = 13/226 (5%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++G
Sbjct: 1 MAGYRVEDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF+++ RWL EL H+D N+
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T +GK+ AE + L FMETSAL+++NV AF V+T+IY I S
Sbjct: 120 VVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K + + E +G V +GEK E + KK GCCS+
Sbjct: 180 KKQVEAGE---------DGNASVPKGEKIEVKNDVSALKKLGCCSN 216
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 159/221 (71%), Gaps = 5/221 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA E+D DYLFK+VLIGDS VGKSNLL+RF R+EF+ SKSTIGVEF T+ + G
Sbjct: 1 MASPKEDDY--DYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++ +F+++ RWL EL H+D N
Sbjct: 59 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANT 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ R V T E A AE L F+ETSAL++ V +AFQ ++TEIY ++S
Sbjct: 119 VIMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
RK M ++E S +G +V+ +K E + KK+ CC
Sbjct: 179 RKTMQAEE---NQISIPSGDNIVITSDKTEEGVKKKKSSCC 216
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 161/219 (73%), Gaps = 2/219 (0%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + D+ DY+FKVV+IGDSAVGKS +L+RFA++EF +SKSTIGVEFQT+ + I+ K +
Sbjct: 5 YGDYDQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTI 64
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
K QIWDTAGQER+RAVTSAYYRGA+GA+LVYDI++RQ+FD + RWL EL H+D N+V +
Sbjct: 65 KTQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIM 124
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNK DL+D R V + K A+ +GLFF ETSAL++ NV AF T +TEIY I+SRK
Sbjct: 125 LIGNKCDLRDMRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIVSRKA 184
Query: 184 MIS-QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + +E + ++++ G + L ++ KK CC
Sbjct: 185 LTANEEERNGNAAALTGTKIALSSPEQPV-MTVKKRSCC 222
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 151/188 (80%), Gaps = 2/188 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAF + D DYLFKVVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + G
Sbjct: 1 MAF--KVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+
Sbjct: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V ++ GNKSDL R V+T + ++LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S
Sbjct: 119 VIMMAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIIS 178
Query: 181 RKVMISQE 188
+K + +QE
Sbjct: 179 KKALAAQE 186
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 153/210 (72%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V E KA AE GL F+ETSALDSSNV AFQT++TEIY I+S++ ++
Sbjct: 129 RHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQR-----QMSG 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ SF+ + V+ + K++ CC
Sbjct: 184 RGDDSFSPSSKVVPITVQPTQNSGKQSACC 213
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 158/216 (73%), Gaps = 6/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + I G+ +KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI+++QTF++I RWL EL H+D N+V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G+ALAE +GL F+ETSAL++ NV AFQT++ +I+ I+S+K + +Q
Sbjct: 126 KSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + A K GCCSS
Sbjct: 186 EAAGSGPPT-QGTTINVTD-----SAVNTKRGCCSS 215
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 162/221 (73%), Gaps = 2/221 (0%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y E ++ DY+FKVVLIGDSAVGK+ LLARFA+++F +SK+TIGVEFQT+ + I+ K
Sbjct: 90 LYGEYNQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKT 149
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD++ +WL EL H+D N+V
Sbjct: 150 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVV 209
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL R V T + + A+ + LFFMETSAL+S+NV AF T++TEIY ++S+K
Sbjct: 210 MLIGNKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKK 269
Query: 183 VMISQELKQKDSSS--FNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + S G +++ ++ A + K GCC
Sbjct: 270 TLTANDDADPSGISGLLKGTKIIVPSQEINAGEKKGKGGCC 310
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 160/216 (74%), Gaps = 7/216 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGA+GALLVYD+++ TF+++ RWL EL H+D N+V +L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DLK R V T + + AE +GL F+ETSAL+++NV AFQT++ EIY I+S+K + S
Sbjct: 126 KTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSSD 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + GKT+V++G +D KK CCSS
Sbjct: 186 D--PAPAGIKEGKTLVVDG----SDTNTKKT-CCSS 214
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 159/221 (71%), Gaps = 5/221 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA E+D DYLFK+VLIGDS VGKSNLL+RF R+EF+ SKSTIGVEF T+ + G
Sbjct: 165 MASPKEDDY--DYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEG 222
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++ +F+++ RWL EL H+D N
Sbjct: 223 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANT 282
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ R V T E A AE L F+ETSAL++ V +AFQ ++TEIY ++S
Sbjct: 283 VIMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMS 342
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
RK M ++E S +G +V+ +K E + KK+ CC
Sbjct: 343 RKTMQAEE---NQISIPSGDNIVITSDKTEEGVKKKKSSCC 380
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 163/225 (72%), Gaps = 13/225 (5%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y E D DY+FKVVLIGDSAVGKS LL+RF+R+EF SK+TIGVEFQT+ + ++ K +
Sbjct: 5 YHEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTI 64
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI+++Q+FD + RWL EL H+D N+V +
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIM 124
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL + R+V T + AE + L F+ETSA++S+NV AF V++EIY I+S+
Sbjct: 125 LIGNKSDLSNLRQVDTDVARVYAEKEKLSFLETSAMESTNVETAFYAVLSEIYKIVSKNA 184
Query: 184 MISQELKQKDSSSFNGKTVVLEGEK-----KEADAEPKKAGCCSS 223
+I+ E + G T +L G K K+ K+AGCCSS
Sbjct: 185 LIADENQ--------GGTPLLSGTKINLTDKDDVIGSKRAGCCSS 221
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/226 (56%), Positives = 166/226 (73%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K M E ++S V +GEK + + K+ GCCS+
Sbjct: 180 KKAM---EAGDDGAAS----AVPSKGEKIDVGKDVSAMKRVGCCSN 218
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 165/223 (73%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++I+
Sbjct: 1 MAGYRADDEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDN 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R T++++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T E K LAE +GL+FMETSAL+++NV AF +T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + + + S+ G+T+ + K+ + KK GCCSS
Sbjct: 180 KKAVEAGDEGATSSAPPKGETINI----KDEGSSWKKFGCCSS 218
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 167/226 (73%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDS 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+ +IY+I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAE---PKKAGCCSS 223
+K M + D+++ V +GEK + + + K+ GCCSS
Sbjct: 180 KKAM-----ETGDNAA--ASAVPSKGEKIDVNKDVSAKKRVGCCSS 218
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 166/223 (74%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +E+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 108 MAYRAEDD--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 165
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 166 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANI 225
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+ + K AE + FFMETSAL+S NV +AF V+T+IY ++S
Sbjct: 226 VIMLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVS 285
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K+ + KK+GCCSS
Sbjct: 286 KKAL---DIGDDPAAPPRGQTINVGG--KDDVSAVKKSGCCSS 323
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 166/223 (74%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +E+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRAEDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+ + KA AE + FFMETSAL++ NV AF V+T+IY ++S
Sbjct: 119 VIMLVGNKADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K+ + KKAGCCSS
Sbjct: 179 KKAL---DIGDDPAAPPRGQTINVGG--KDDVSAVKKAGCCSS 216
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/226 (57%), Positives = 163/226 (72%), Gaps = 13/226 (5%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++G
Sbjct: 1 MAGYRVEDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T +GK+ AE + L FMETSAL+++NV AF V+T+IY I S
Sbjct: 120 VVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K + + E +G V +GEK E + KK GCCS+
Sbjct: 180 KKQVEAGE---------DGNASVPKGEKIEVKNDVSALKKLGCCSN 216
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 155/217 (71%), Gaps = 2/217 (0%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL+ R V T E KA AE GL F+ETSALDS+NV AF ++TEIY+I+S+K +
Sbjct: 124 NKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQI-- 181
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ D S + + D K+ CC++
Sbjct: 182 HDSPSSDGSHPSNNVQTIHVAPTTDDDRKKRVQCCNA 218
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/219 (56%), Positives = 158/219 (72%), Gaps = 11/219 (5%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + I GK VKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLV+DI++RQTFD++ RWL EL H+D N+V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V + +A +E +GL F+ETSAL++ NV AF TV++EI+ I+S+K + +Q
Sbjct: 126 KSDLNHLRSVPEEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPK---KAGCCSS 223
E + S G T+ + AEP K CCSS
Sbjct: 186 ESAAANGRSMQGTTINV--------AEPSTNAKGSCCSS 216
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 153/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS GKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + S +
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDDVI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K S G+T+ ++ + + KK GCC
Sbjct: 188 KPSG---GETITVQPSADDG-GQTKKNGCC 213
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 164/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA E+D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + G
Sbjct: 1 MAHRVEQDY--DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+
Sbjct: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V ++ GNK+DL R V +G+ LAE +GL F+ETSAL+++NV AFQTV+ EIY+I+S
Sbjct: 119 VIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIIS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + +QE +S+ T + G+ A K GCCS+
Sbjct: 179 KKALAAQEAAAANSAIPGQGTTINVGDTSGAG----KRGCCST 217
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 167/226 (73%), Gaps = 11/226 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDS 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+ +IY+I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K M + D+++ V +GEK + + + K+ GCCSS
Sbjct: 180 KKAM-----ETGDNAA--ASAVPSKGEKIDVNKDVSAMKRVGCCSS 218
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 153/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS GKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + S +
Sbjct: 128 RHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDDVI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K S G+T+ ++ + + KK GCC
Sbjct: 188 KPSG---GETITVQPSADDG-GQTKKNGCC 213
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 166/223 (74%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +E+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRAEDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+ + K AE + FFMETSAL+S NV +AF V+T+IY ++S
Sbjct: 119 VIMLVGNKADLRHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K+ + KKAGCCSS
Sbjct: 179 KKAL---DIGDDPAAPPRGQTINVGG--KDDVSAVKKAGCCSS 216
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 152/210 (72%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + K VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVESKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE GL F+ETSALDSSNV AFQT++T IYNI+S++ ++
Sbjct: 129 RHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQR-----QMSG 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + F+ + V+ + K+ CC
Sbjct: 184 RSDADFSPSSNVVPITVQPTQNASKQGACC 213
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 156/214 (72%), Gaps = 6/214 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGK+NLL+RF R+EF SKSTIGVEF T+ + ++ K +KAQI
Sbjct: 4 DEEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDIS+ T++S+ RWL EL H+D N+V +LVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL+ R V T E K A GL F+ETSALD++NV +FQ ++TEIY I+S K + S
Sbjct: 124 KSDLRHLRAVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKALESS 183
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K +S G+T+++ + D + K+ GCC
Sbjct: 184 NNTIKPTS---GQTILV---SQTPDEQTKQGGCC 211
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 153/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S+K + E Q
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDQGESAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ G+ LE AD E K+ CC
Sbjct: 187 ---NPIGGERRTLE-ITNSADTEAKQGKCC 212
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 165/223 (73%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I+
Sbjct: 1 MAGYRADDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDS 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V T +GK+ AE + L+FMETSAL+++NV AF V+++IY+I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + + E + G+T+ + KE + K+ GCCS+
Sbjct: 180 KKAVEAGESGSSSAVPSIGQTINV----KEDSSVFKRFGCCSN 218
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 164/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAAYRTDDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+T + +A AE + FFMETSAL+S NV AF V+T+IY ++
Sbjct: 120 VIMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVC 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
RK + E+ + ++ G+T+ + G K + A KK GCCSS
Sbjct: 180 RKAL---EIGEDPAALPKGQTINV-GNKDDVSA-MKKVGCCSS 217
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 163/217 (75%), Gaps = 6/217 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D YLFK+VLIGDS VGKSN+L+RF R+ F +SKSTIGVEF T+ + I+GK +KAQI
Sbjct: 6 DHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAV ALLVYDI++RQ+FD++ RWL EL H+D ++V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R ++ EGKALAE +GLFF+ETSA+++ NV AFQT++TE+Y I++RK + ++
Sbjct: 126 KSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRKALAAK 185
Query: 188 ELKQKDSS-SFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + GKT+ + +++A K CCS+
Sbjct: 186 EAAATAAPLPSQGKTISI-----DSNAGNTKKACCST 217
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 154/212 (72%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSN+ +RF R+EF SKSTIGVEF T+ + I+GK VKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++Q+FDS+ RWL EL H+D N+V ++VGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V +G+A +E +GL F+ETSAL++ NV AF T+++EI+ +S+K + +Q
Sbjct: 130 NHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAAQASAS 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S G T+ + + K CCSS
Sbjct: 190 TNGRSMQGTTINV-----AESSTVTKGSCCSS 216
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 162/226 (71%), Gaps = 13/226 (5%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++G
Sbjct: 1 MAGYRVEDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF+++ RWL EL H+D N+
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T +GK+ AE + L FMETSAL+++NV AF V+T+IY I S
Sbjct: 120 VVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K + + E +G V +GEK E + KK GCCS+
Sbjct: 180 KKQVEAGE---------DGNASVPKGEKIEVKNDVSALKKLGCCSN 216
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 166/223 (74%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +E+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRAEDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+ + K AE + FFMETSAL+S NV +AF V+T+IY ++S
Sbjct: 119 VIMLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K+ + KK+GCCSS
Sbjct: 179 KKAL---DIGDDPAAPPRGQTINVGG--KDDVSAVKKSGCCSS 216
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 150/210 (71%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A GL F+ETSALD+SNV AFQ +TEIY I+S K + E Q
Sbjct: 127 RHLRAVPTEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAIEQGEPSQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
G ++ L DA KK CC
Sbjct: 187 GPG---QGTSIPLGPSHPPGDAS-KKGQCC 212
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 156/211 (73%), Gaps = 3/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + GK +KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ TF+++ RWL EL H+D N V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T E A AE L F+ETSAL+++ V +AFQ ++TEIY ++SRK + ++E
Sbjct: 130 RHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRILTEIYKLMSRKTIQAEE--N 187
Query: 192 KDSSSFNGKTVVLEGEK-KEADAEPKKAGCC 221
+S G ++ + E E+ + KK+GCC
Sbjct: 188 ASASLPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 162/217 (74%), Gaps = 6/217 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D YLFK+VLIGDS VGKSN+L+RF R+ F +SKSTIGVEF T+ + + GK +KAQI
Sbjct: 6 DHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQ+FD++ RWL EL H+D ++V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ EGKALAE +GLFF+ETSA+++ NV AFQT++TE+Y I++RK + ++
Sbjct: 126 KSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAK 185
Query: 188 ELKQKDSS-SFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + GKT+ + ++ A K CCS+
Sbjct: 186 EAAAASAPLPSQGKTISI-----DSAAGNTKRACCSA 217
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 155/210 (73%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ G + L ++A A K+GCC
Sbjct: 187 ATIGA--GTNISLSKPAEDATA---KSGCC 211
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 162/213 (76%), Gaps = 7/213 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V+T + +A +E +GL F+ETSAL+S+NV AFQ ++TEIY I+S+K + S+E
Sbjct: 130 KHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEE--- 186
Query: 192 KDSSSFNGK-TVVLEGEKKEADAEPKKAGCCSS 223
+++ G+ T ++ + D KK GCC +
Sbjct: 187 -NTTEGPGQGTNIVPLDSNAPDL--KKKGCCGA 216
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 162/223 (72%), Gaps = 8/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAAYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+T + KA AE + FFMETSAL+S NV AF V+T+IY ++S
Sbjct: 120 VIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
RK + E+ + G+T+ + K+ + KK GCCS+
Sbjct: 180 RKAL---EVGDDPGALPKGQTINV----KDDVSAVKKVGCCSA 215
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 141/173 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + I+GK VKAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R V T E KA + GL F+ETSALD+SNV +AFQT++T+IY I+S K +
Sbjct: 128 KHLRAVPTDEAKAFSSENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL 180
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 156/212 (73%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQIWDTA
Sbjct: 13 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGA+GALLVYD+++ TFD++ RWL EL H+D N+V +L+GNK+DL
Sbjct: 73 GQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGNKTDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T + ++ AE +GL F+ETSAL+++NV AFQT + EIY I+S+K + +
Sbjct: 133 KHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTANEPA 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ GKT+ + G + +P CC+S
Sbjct: 193 AAANIKEGKTIAIGGSETTNTNKP----CCTS 220
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 156/217 (71%), Gaps = 2/217 (0%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V + VG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMQVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL+ R V T E KA AE GL F+ETSALDS+NV AFQ ++TEIY+I+S+K +
Sbjct: 124 NKSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQIHD 183
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S N +T+ + E K+ CC++
Sbjct: 184 SPTSDGSHPSNNVQTIHVAPTTDE--DRRKRVQCCNT 218
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 157/216 (72%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDLK R V T + +A +E +GL F+ETSAL+S+NV AFQ ++TEIY I+S+K + S+
Sbjct: 126 KSDLKHLRGVPTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASE 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + V L+ + KK GCC +
Sbjct: 186 E-STTEGPGQGTNIVPLDSNSPDL----KKKGCCGA 216
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 167/223 (74%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +++D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RW+ EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+T + KA AE + FFMETSAL+S NV AF V+T+IY+++S
Sbjct: 119 VIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K+ + KK+ CCSS
Sbjct: 179 KKAL---DIGDDPAAPPKGQTINVGG--KDDVSAVKKSACCSS 216
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 8/212 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V+T E K A GL F+ETSALD+SNV +AFQ ++T+IY I+S K + S
Sbjct: 128 KHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG--CC 221
K S G+T+++ AD K+G CC
Sbjct: 188 KPSG---GETILV---APTADDGGAKSGSKCC 213
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 157/211 (74%), Gaps = 6/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K+ A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+S G ++ L K AD +K+G CC
Sbjct: 187 --ASIGTGPSIAL---SKPADDSAEKSGKCC 212
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/227 (55%), Positives = 165/227 (72%), Gaps = 14/227 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDS 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGK-TVVLEGEK---KEADAEPKKAGCCSS 223
+K + E NG +V +GEK K + K+ GCCSS
Sbjct: 180 KKAVEGAE---------NGTASVPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 157/210 (74%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V+T E K A GL F+ETSALD+SNV +AFQ ++T+IY I+S K + S
Sbjct: 128 KHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K S G+T+++ + A+ + CC
Sbjct: 188 KPS---GGETILVAPTADDGGAKS-SSKCC 213
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 152/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 32 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 91
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 92 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 151
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K Q
Sbjct: 152 RHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK----QIRDP 207
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + V K ++E + CC
Sbjct: 208 PEGDTIRPQNVEPIDVKPTMNSEGMRKPCC 237
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 155/211 (73%), Gaps = 3/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + GK +KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ TF+++ RWL EL H+D N V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T E A AE L F+ETSAL+++ V AFQ ++TEIY ++SRK + ++E
Sbjct: 130 RHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRILTEIYKLMSRKTIQAEE--N 187
Query: 192 KDSSSFNGKTVVLEGEK-KEADAEPKKAGCC 221
+S G ++ + E E+ + KK+GCC
Sbjct: 188 ATASLPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 156/211 (73%), Gaps = 6/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+ ++ G ++ L K AD K G CC
Sbjct: 187 ANIAA--GTSLSLS---KPADENADKGGKCC 212
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 164/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MASYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+T + KA AE + FFMETSAL+S NV AF V+T+IY ++S
Sbjct: 120 VIMLVGNKADLRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
RK + ++ ++ G+T+ + G K + A KK GCCS+
Sbjct: 180 RKAL---DIGDDPAALPKGQTINV-GTKDDVSA-VKKVGCCSA 217
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 163/217 (75%), Gaps = 6/217 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D YLFK+VLIGDS VGKSN+L+RF R+ F +SKSTIGVEF T+ + ++GK +KAQI
Sbjct: 6 DHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQ+FD++ RWL EL H+D ++V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R ++ EGKALAE +GLFF+ETSA+++ NV AFQT++TE+Y I++RK + ++
Sbjct: 126 KSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVNRKALAAK 185
Query: 188 ELKQKDSS-SFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E +S GK + + ++ A K CCS+
Sbjct: 186 EAAAATASLPSQGKIISI-----DSTAGNTKRACCST 217
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y + + DY+FKVVLIGDSAVGK+ LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 4 LYGDYHQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWL EL H+D N+V
Sbjct: 64 IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL R V + + +A+ + LFFMETSAL+S+NV F T++TEIY I ++K
Sbjct: 124 MLIGNKCDLGSLRAVPMEDAEEVAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKK 183
Query: 183 VMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + S G +++ + E D KK GCC
Sbjct: 184 SLTASDDDNWGSGLLKGSRIIVPNQ--EIDNGGKKGGCC 220
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/225 (56%), Positives = 167/225 (74%), Gaps = 11/225 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCS 222
+K S E + ++S +V +GE+ K+ + K+ GCCS
Sbjct: 180 KK---SVEGGDEGAAS----SVPAKGERINVKDDASALKRVGCCS 217
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 154/216 (71%), Gaps = 17/216 (7%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + E
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGE--- 183
Query: 192 KDSSSFNGKTVVLEGEK------KEADAEPKKAGCC 221
G VL ++ K ADAE KK GCC
Sbjct: 184 -------GSGPVLGNDRKVLEISKSADAEQKK-GCC 211
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 142/173 (82%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF P+SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS++ TF ++ RWL EL H+D ++V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R V T E K A GL F+ETSALD+SNV AAFQ ++T+IY I+S K +
Sbjct: 128 KHLRAVLTDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYRIVSSKSL 180
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 126/227 (55%), Positives = 166/227 (73%), Gaps = 14/227 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDS 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+T+IY+I+S
Sbjct: 120 VVMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVS 179
Query: 181 RKVMISQELKQKDSSSFNGK-TVVLEGEK---KEADAEPKKAGCCSS 223
+K + E NG +V +GEK K + K+ GCCSS
Sbjct: 180 KKTVEGAE---------NGNASVPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 156/212 (73%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D +V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+ M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +PK CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKPKMQ-CCQN 215
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 165/223 (73%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++I+G
Sbjct: 1 MAGYRGDDEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+T AYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T E K+LAE + L+FMETSAL+++NV AF +T+IY I+S
Sbjct: 120 VVMLLGNKSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + + + ++ G+T+ + K+ + KK GCCSS
Sbjct: 180 KKAVEAGDEGATSTAPPKGQTINI----KDEGSAWKKFGCCSS 218
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 157/215 (73%), Gaps = 16/215 (7%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKS+LL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ +++++ RWL EL H+D N++ +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R + T E KA AEA GL F+ETSALDS+NV AFQ ++TEIY I+S++ M
Sbjct: 129 RHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQM------- 181
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-----CC 221
+D + V+ + + AD P +A CC
Sbjct: 182 RDPPEGD----VIRPDAEPADVRPSQADSVRRQCC 212
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 166/223 (74%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +++D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RW+ EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V T + KA AE + FFMETSAL++ NV AF V+T+IY+++S
Sbjct: 119 VIMLVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K+ + KK+ CCSS
Sbjct: 179 KKAL---DIGDDPAAPPRGQTISVGG--KDDVSAVKKSACCSS 216
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 164/223 (73%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I+
Sbjct: 1 MAGYKGDDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDA 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V T +GK+ AE + L+FMETSAL+++NV AF V+++IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + + + + G+T+ + K+ + KK GCCS+
Sbjct: 180 KRTVEAGKNASSSAVPSKGQTINV----KDDSSVLKKIGCCSN 218
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 158/219 (72%), Gaps = 9/219 (4%)
Query: 9 RAE---DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAE DYLFKVVLIGDS VGKSNLL+RFARDEF ++STIGVEF T+ + ++ K VKA
Sbjct: 6 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGAL+VYD+SRR TFD+ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVVMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DL+ R V+ + A AE G F METSALD++NV AF V+ +IY+++SR +
Sbjct: 126 GNKADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNAL- 184
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKA-GCCSS 223
++ ++ GKT+ + K E P A GCCSS
Sbjct: 185 --DIGDDPAAPPRGKTIDVSAAKDE--VSPVNAGGCCSS 219
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 152/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K Q
Sbjct: 129 RHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK----QIRDP 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + V K +AE + CC
Sbjct: 185 PEGDTIRPQNVEQIEVKPTMNAEGMRKQCC 214
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 155/209 (74%), Gaps = 5/209 (2%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
+ FK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAG
Sbjct: 140 HFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 199
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+
Sbjct: 200 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 259
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 192
R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 260 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRREN 317
Query: 193 DSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
D S N VV + +P K CC
Sbjct: 318 DMSPSN--NVVPIHVPPTTENKP-KVQCC 343
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 163/217 (75%), Gaps = 7/217 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDLK R V+T + ++ +E +GL F+ETSAL+S+NV AFQ ++TEIY I+S+K + S+
Sbjct: 126 KSDLKHLRGVSTDDAQSFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASE 185
Query: 188 ELKQKDSSSFNGK-TVVLEGEKKEADAEPKKAGCCSS 223
E +++ G+ T ++ + D KK GCC +
Sbjct: 186 E----NTTEGPGQGTNIVPLDSNAPDL--KKKGCCGA 216
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 155/211 (73%), Gaps = 6/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGPQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+ G ++ K AD +K+G CC
Sbjct: 187 ATIGAGPGISLT-----KPADDSAEKSGKCC 212
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 155/212 (73%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ET ALDS+NV AAFQT++TEIY I+ +K M +
Sbjct: 121 RHFRAVPTDEARAFAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMSD----R 176
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++ F VV + +P K CC +
Sbjct: 177 RENDMFPSNNVVPIHVPPTTENKP-KVQCCQN 207
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 156/216 (72%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ + + LAE +GL F+ETSAL++ N+ AFQ+++ +IY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + + P CC++
Sbjct: 186 E-AANSTGLPQGTTINVANLSGNVNKRP----CCTN 216
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 165/223 (73%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +++D DYLFKVVLIGDS VGKSNLL RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRADDDY--DYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+ + KA AE + FFMETSAL+S NV AF V+T+IY ++S
Sbjct: 119 VIMLVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K + A KKAGCCSS
Sbjct: 179 KKAL---DIGDDPAAPPRGQTINV-GSKDDVSA-VKKAGCCSS 216
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 143/178 (80%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ M ++GK +K
Sbjct: 2 SSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+T+AYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +L
Sbjct: 62 AQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
VGNKSDL+ R V T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 122 VGNKSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQK 179
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 152/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K Q
Sbjct: 129 RHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK----QIRDP 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + V K ++E + CC
Sbjct: 185 PEGDTIRPQNVEPIDVKPTMNSEGMRKQCC 214
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 152/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K Q
Sbjct: 129 RHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK----QIRDP 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + V K ++E + CC
Sbjct: 185 PEGDTIRPQNVEPIDVKPTMNSEGMRKQCC 214
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 154/211 (72%), Gaps = 6/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+ G + L K AD E K G CC
Sbjct: 187 ATIGA--GTNISLS---KAADDEAAKGGKCC 212
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 163/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA E+D DYLFK+VLIGDS VGK+N+L+RF R+EF SKSTIGVEF T+ + + G
Sbjct: 1 MAHRVEQDY--DYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+
Sbjct: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V ++ GNK+DL R V +G+ LAE +GL F+ETSAL+++NV AFQTV+ EIY+I+S
Sbjct: 119 VIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIIS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + +QE +S+ T + E + K GCCS+
Sbjct: 179 KKALAAQEAAAANSAIPGQGTTI----NVEDTSGAGKRGCCST 217
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 159/216 (73%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGA+GALLVYD+++ TF+++ RWL EL H+D N+V +L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DLK R V T + ++ AE +GL F+ETSAL++ NV AFQT+++EIY I+S+K IS
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKK-SISS 184
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ ++S G+T+ + + +P CCSS
Sbjct: 185 DQTTANASIKEGQTIDVAATSESTAKKP----CCSS 216
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 156/210 (74%), Gaps = 7/210 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + + E Q
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGEGGQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + V++ K++++ +P GCC
Sbjct: 187 Q----VLDRRPVIDPSKQDSEQKP---GCC 209
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 152/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 43 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 102
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 103 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 162
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K Q
Sbjct: 163 RHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK----QIRDP 218
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + V K ++E + CC
Sbjct: 219 PEGDTIRPQNVEPIDVKPTMNSEGMRKQCC 248
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 152/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A GL F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + G + L K D K CC
Sbjct: 187 ANIGA--GTNISL--SKPADDGSAKGGKCC 212
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 154/211 (72%), Gaps = 6/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGPQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+ G ++ K AD +K G CC
Sbjct: 187 ATIGAGPGISLT-----KPADDSAEKGGKCC 212
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/222 (54%), Positives = 161/222 (72%), Gaps = 6/222 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +++D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+ +GKA AE + +FMETSAL+S+NV AF V+++IY I+S
Sbjct: 119 VIMLVGNKADLRHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+K + E D ++ K + K+ KK GCCS
Sbjct: 179 KKALDVGE----DPAAVPSKGQTIHVGNKDDVTAMKKVGCCS 216
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 155/211 (73%), Gaps = 6/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K+ A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+ G + L K AD E K+G CC
Sbjct: 187 ATIGA--GTNISL---SKPADDESAKSGKCC 212
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 151/210 (71%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K Q
Sbjct: 129 RHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK----QIRDP 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + V K +AE + CC
Sbjct: 185 PEGDTIRPHNVEQIEVKPTMNAEGMRKQCC 214
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/227 (55%), Positives = 165/227 (72%), Gaps = 14/227 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDS 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGK-TVVLEGEK---KEADAEPKKAGCCSS 223
+K + E NG +V +GEK K + K+ GCCSS
Sbjct: 180 KKAVEGAE---------NGNASVPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 161/223 (72%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA +EE+ DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G
Sbjct: 1 MARRAEEEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+ VKAQIWDTAGQER+RA+TSAYYRGA+GALLVYD+++ TF+++ RWL EL H+D N+
Sbjct: 59 RTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNK+DLK R V T + + AE +GL F+ETSAL+++NV AFQT++ EIY I+S
Sbjct: 119 VIMLIGNKTDLKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIIS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + S + GKT+ + G + +P CC+S
Sbjct: 179 KKSLSSNDPAANIIKE--GKTITVGGAPEPNTNKP---SCCTS 216
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R +T + A A+ Q FFMETSAL+S NV AF V+T+IY ++SRK + ++
Sbjct: 131 RHLRAITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL---DIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KKAGCCSS
Sbjct: 188 DPAALPRGQTINV-GSRDDVSA-VKKAGCCSS 217
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 163/223 (73%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I+G
Sbjct: 1 MAGYKADDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++ GRWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T +GKA AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + + + + G+T+ + E + + CCS+
Sbjct: 180 KRAVEAGDRASTSVAPSQGQTINV----NEDSSVLNRYRCCSN 218
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 162/223 (72%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+V IGDS VGKSNLL+RF R+EF SKSTIGVEF T+ +DI+
Sbjct: 1 MAGYKGDDEY-DYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDA 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V T +GK+ AE + L+FMETSAL+++NV AF V+++IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + + + G+T+ + K+ + KK GCCS+
Sbjct: 180 KRAVEAGNNASSSAVPSKGQTINV----KDDSSVLKKIGCCSN 218
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 163/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAAYRADDEY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V + VGNK+DL+ R V+T + KA AE + FFMETSAL+S NV AF V+++IY ++S
Sbjct: 120 VIMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
RK + ++ ++ G+T+ + G K + A KK GCCS+
Sbjct: 180 RKAL---DIGDDPAALPKGQTINV-GSKDDVSA-VKKVGCCSN 217
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 152/210 (72%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALD +NV AF ++TEIY I+S++ M +
Sbjct: 129 RHLRSVPTDEARAFAERHSLSFIETSALDCTNVETAFHNILTEIYRIVSQRPM--HDSPD 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+DS N + + + A + K+ CC
Sbjct: 187 EDSPPGNSGPIQISPTEPNAGS---KSNCC 213
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 160/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + KA AE + FFMETSAL+S NV AF V+T+IY ++SRK + E+
Sbjct: 131 RHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTL---EIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KK+GCCS+
Sbjct: 188 DPAALPKGQTINV-GSRDDVSA-VKKSGCCSA 217
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 162/217 (74%), Gaps = 6/217 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D YLFK+VLIGDS VGKSN+L+RF R+ F +SKSTIGVEF T+ + I+GK +KAQI
Sbjct: 6 DHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAV ALLVYDI++RQ+FD++ RWL EL H+D ++V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R ++ EGKALAE +GLFF+ET A+++ NV AFQT++TE+Y I++RK + ++
Sbjct: 126 KSDLIHLRAISEDEGKALAEKEGLFFLETLAMEAINVEEAFQTIITEVYGIVNRKALAAK 185
Query: 188 ELKQKDSS-SFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + GKT+ + +++A K CCS+
Sbjct: 186 EAAATAAPLPSQGKTISI-----DSNAGNTKKACCST 217
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 154/211 (72%), Gaps = 6/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+ G + L K AD + K G CC
Sbjct: 187 ATIGA--GTNISLS---KPADDDASKGGKCC 212
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 155/210 (73%), Gaps = 7/210 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF+ +SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+DS+ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T E KA + L F+ETSALD+SNV +AFQT++T IY I+S K + Q
Sbjct: 128 KHLRAVPTEEAKAFSTENELSFIETSALDASNVDSAFQTILTGIYRIVSSKSL-EQSADP 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + V ++ + P ++ CC
Sbjct: 187 IRAPTSDTIPVAIDS------SAPSQSKCC 210
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/173 (67%), Positives = 142/173 (82%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R VTT E KA + GL F+ETSALD+SNV +AFQT++T+IY I+S K +
Sbjct: 128 KHLRAVTTDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL 180
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 149/210 (70%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QTF ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + KA A GL F+ETSALD+SNV AFQ +TEIY I+S S+ L Q
Sbjct: 127 RHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVS-----SKALDQ 181
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S G+ + E KK CC
Sbjct: 182 DTSGPAPGQGTSIPLSASTPAGEAKKGQCC 211
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 166/224 (74%), Gaps = 6/224 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y D DYLFK+VLIGDS VGKSNLL+RF R++F SKSTIGVEF T+ ++I+G
Sbjct: 1 MAGYKGHDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNM 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNK DL+ V T +GK+ AE + L+FMETSALD++NV +AF V+++IY I+S
Sbjct: 120 VVMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVS 179
Query: 181 RKVMISQELKQKDSS-SFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + + ++ ++ G+T+ + K+ + K+ GCCSS
Sbjct: 180 KRSVEAGDIGSASTTLPSKGQTI----DVKDDSSVLKRIGCCSS 219
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 162/223 (72%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I+G
Sbjct: 1 MAGYKADDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++ GRWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T +GKA AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + + + G+T+ + E + + CCS+
Sbjct: 180 KRAVEAGDRPSTSVVPSQGQTINV----NEDSSVLNRYRCCSN 218
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 158/212 (74%), Gaps = 6/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R VTT + KA AE + FFMETSAL+S NV AF V+T+IY ++SRK + ++
Sbjct: 131 RHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKAL---DVGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + K+ + KK GCCS+
Sbjct: 188 DPAALPKGQTINV---GKDDVSAVKKVGCCSA 216
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 156/216 (72%), Gaps = 7/216 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + GK +KAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDIS+ TF+++ RWL EL H++ N+V +LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL+ R V T E A +E L F+ETSALD+S V AFQ ++TEIY ++SR+ M ++
Sbjct: 126 KSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMAAE 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S +G+T+ L E K P++ CC++
Sbjct: 186 DGANAPQLS-SGQTISLNAENK-----PRR-NCCNN 214
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 156/217 (71%), Gaps = 3/217 (1%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL+ R V T E +A AE L F+ETSALDS+NV +AFQ ++TEIY I+S+K + +
Sbjct: 124 NKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRN 183
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S N K + + ++ +K CC +
Sbjct: 184 DTDNDPSPSGDNVKPISIAPTDS---SDTRKKQCCQT 217
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 162/223 (72%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I+G
Sbjct: 1 MAGYKADDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++ GRWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T +GKA AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + + + G+T+ + E + + CCS+
Sbjct: 180 KRAVEAGDRASTSVVPSQGQTINV----NEDSSVLNRYRCCSN 218
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 156/215 (72%), Gaps = 6/215 (2%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T+++I RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NK DL+ R V T E K AE L F+ETSALDS+NV AFQ ++TEIY+I+S+K
Sbjct: 124 NKCDLRHLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNILTEIYHIVSQK---- 179
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
++K +S ++ G ++D + KK CC
Sbjct: 180 -QIKDAPQNSEISSQPIVVGPTVDSDVK-KKPQCC 212
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 145/181 (80%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DL R V+ + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S+K + +Q
Sbjct: 126 KADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 188 E 188
E
Sbjct: 186 E 186
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + KA AE + FFMETSAL+S NV AF V+T+IY ++SRK + E+
Sbjct: 131 RHLRAVATNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTL---EIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KK+GCCS+
Sbjct: 188 DPAALPKGQTINV-GSRDDVSA-VKKSGCCSA 217
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 160/216 (74%), Gaps = 1/216 (0%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSNLL+RF R+EF +KSTIGVEF T+ + ++ K VKAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H++ VV +LVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DL+ R V+T E AE + ++FMETSAL+S NV AF V+T+IYN++SRK + +
Sbjct: 124 KADLRHLRAVSTEEATEYAEKENIYFMETSALESLNVGNAFVEVLTQIYNVVSRKTLETM 183
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + G+T+V+ G K + + KK+GCCS+
Sbjct: 184 DDDPNSKALPKGETIVI-GTKDDDVSAVKKSGCCST 218
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 163/223 (73%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA EE+ DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G
Sbjct: 1 MARRPEEEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+ VKAQIWDTAGQER+RA+TSAYYRGA+GALLVYD+++ TF+++ RWL EL H+D N+
Sbjct: 59 RTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNK+DLK R V T + ++ AE +GL F+ETSAL++ NV AFQT+++EIY I+S
Sbjct: 119 VIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIIS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K IS + +++ G+T+ + + +P CCSS
Sbjct: 179 KK-SISSDQASANANVKEGQTIDVAASSESNTKKP----CCSS 216
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/173 (67%), Positives = 141/173 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R V T E KA + GL F+ETSALD+SNV AAFQT++T+IY I+S K +
Sbjct: 128 KHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKAL 180
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 165/223 (73%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +++D DYLFKVVLIGDS VGKSNLL RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRADDDY--DYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+ + KA AE + FFMETSAL++ NV AF V+T+IY ++S
Sbjct: 119 VIMLVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K + A KKAGCCSS
Sbjct: 179 KKAL---DIGDDPAAPPRGQTINV-GSKDDVSA-VKKAGCCSS 216
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/176 (65%), Positives = 142/176 (80%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +NGK +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
NKSDL+ R V T E KA +E GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 124 NKSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTEIYLIVSQK 179
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 166/221 (75%), Gaps = 12/221 (5%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
SE+D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++GK +K
Sbjct: 6 SEDDY--DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIK 63
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVML 123
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL+ V+T +GK AE + L+FMETSAL+++NV AF V+T+IY I+S+K
Sbjct: 124 VGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKK-- 181
Query: 185 ISQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCS 222
S E + ++S +V +GE+ K+ + K+ GCCS
Sbjct: 182 -SVEGGDEGAAS----SVPAKGERINVKDDASALKRVGCCS 217
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 153/211 (72%), Gaps = 6/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+ G + L K AD E K G CC
Sbjct: 187 ATIGA--GTNISLS---KAADDEASKGGKCC 212
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 154/211 (72%), Gaps = 6/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K+ A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+ G + L K AD + K G CC
Sbjct: 187 ATIGA--GTNISLS---KPADDDASKGGKCC 212
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 164/223 (73%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +E+D DYLFKVVLIGDS VGKSNLL RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRAEDDY--DYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V + + KA AE + FFMETSAL++ NV AF V+++IY ++S
Sbjct: 119 VIMLVGNKADLRHLRAVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ GKT+ + G K + A KK+ CCSS
Sbjct: 179 KKAL---DIGDDPAAPPKGKTISV-GSKDDVSA-VKKSACCSS 216
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 158/218 (72%), Gaps = 7/218 (3%)
Query: 9 RAE---DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAE DYLFKVVLIGDS VGKSNLL+RFARDEF ++STIGVEF T+ + ++ K VKA
Sbjct: 6 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGAL+VYD++RR TFD+ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DL+ R VT + A AE G F METSALD++NV AF V+ +IY+++SR +
Sbjct: 126 GNKADLRHLRAVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRNAL- 184
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + ++ GKT+ + K E + GCCS+
Sbjct: 185 --DIGEDPAAPPRGKTIDVGAAKDEV-SPVNTGGCCSA 219
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 152/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC S
Sbjct: 188 DESP---GNNVVDISVPPTTDGQRPNKLQCCQS 217
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 157/216 (72%), Gaps = 4/216 (1%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF+++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+T + + LAE + L F+ETSAL++ NV AFQT++ +IY I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S +G T+ + + KK+ CCS+
Sbjct: 186 GAASTTSLP-HGTTINVSNMSGSVE---KKSACCSN 217
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + V++ + D E K+ GCC
Sbjct: 187 ---AGLGDRRPVVDINPSQ-DPETKQ-GCC 211
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 154/211 (72%), Gaps = 10/211 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T E KA A GL F+ETSALD+SNV +AFQT++T+IY I+S K +
Sbjct: 128 KHLRAVPTDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSL------- 180
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+SSS N + +G A K G CC
Sbjct: 181 -ESSSTNIEPPT-QGISVTAPEPADKGGKCC 209
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC S
Sbjct: 188 DESP---GNNVVDISVPPTTDGQRPNKLQCCQS 217
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 161/217 (74%), Gaps = 6/217 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D YLFK+VLIGD+ VGKSN+L+RF R+ F +SKSTIGVEF T+ + + GK +KAQI
Sbjct: 6 DHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQ+FD++ RWL EL H+D ++V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ EGKALAE +GLFF+ETSA+++ NV AFQT++TE+Y I++RK + ++
Sbjct: 126 KSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAK 185
Query: 188 ELKQKDSS-SFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E GKT+ + ++ A K CCS+
Sbjct: 186 EAAAASRPLPSQGKTISI-----DSAAGNTKRACCSA 217
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 143/178 (80%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +K
Sbjct: 2 STKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+T+AYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +L
Sbjct: 62 AQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
VGNKSDL+ R V T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 122 VGNKSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQK 179
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 155/217 (71%), Gaps = 7/217 (3%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + GK +K
Sbjct: 3 SRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDIS+ TF+++ RWL EL H++ N+V +L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL+ R V T E A +E L F+ETSALD+S V +FQ ++TEIY ++SR+ M
Sbjct: 123 VGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTSFQRILTEIYRLMSRRNM 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
++E + S G+T+ L + K P++ CC
Sbjct: 183 AAEEGGNQPQLS-TGQTISLNNDNK-----PRR-NCC 212
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 151/212 (71%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V E +A AE GL F+ETSALDSSNV AF T++T IYNI+S++ ++
Sbjct: 128 RHLRAVPIDEARAFAEKYGLSFLETSALDSSNVELAFHTILTAIYNIVSQR-----QMSG 182
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S F+ + V+ + K CC S
Sbjct: 183 RSDSDFSPASNVVPITVEPTQTLSNKGVCCQS 214
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 152/210 (72%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S+K + + E Q
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGESAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + G + L K D K CC
Sbjct: 187 ANIGA--GTNISL--SKPADDGAAKGGKCC 212
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 152/212 (71%), Gaps = 11/212 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS--QEL 189
K R V T E K+ A L F+ETSALD+SNV +AFQT++T+IY I+S K + S +
Sbjct: 128 KHLRAVPTDEAKSFAAENNLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSANPI 187
Query: 190 KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ +SS TV D P+ CC
Sbjct: 188 EPPNSSVTVSATV---------DPTPQGNKCC 210
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 158/216 (73%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALL YDI++RQTFD++ RWL EL H D N+V IL GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDLK R V+ + +AL + +GL F+ETSAL++ NV AFQT++T+IY+I+S+K + +Q
Sbjct: 126 KSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + ++ K GCCS+
Sbjct: 186 EAAASTALPGQGTTINVSD-----NSANVKRGCCST 216
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 163/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAAYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V + VGNK+DL+ R V+T + KA AE + FFMETSAL+S NV AF V+++IY ++S
Sbjct: 120 VIMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
RK + ++ ++ G+T+ + G K + A KK GCCS+
Sbjct: 180 RKAL---DIGDDPAALPKGQTINV-GSKDDVSA-VKKVGCCSN 217
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 156/217 (71%), Gaps = 3/217 (1%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL+ R V T E +A AE L F+ETSALDS+NV AAFQ ++TEIY I+S+K + +
Sbjct: 124 NKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQIRN 183
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S N K + + ++ +K CC +
Sbjct: 184 DADNDPSPSGDNVKAISIAPTDS---SDTRKRQCCQT 217
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 160/216 (74%), Gaps = 1/216 (0%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSNLL+RF R+EF +KSTIGVEF T+ + ++ K VKAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H++ VV +LVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DL+ R V+T E AE + ++FMETSAL+S NV AF V+T+IYN++SRK + +
Sbjct: 124 KADLRHLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLETV 183
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + G+T+V+ G K + + KK+GCCS+
Sbjct: 184 DDDPSTKALPKGETIVI-GTKDDDVSAVKKSGCCST 218
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 156/210 (74%), Gaps = 7/210 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + + E Q
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGEGGQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + V++ K++++ +K GCC
Sbjct: 187 Q----VLDRRPVIDPSKQDSE---QKQGCC 209
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 143/175 (81%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D+ DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + GK +KAQI
Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
KSDL R V +G++LAE +GL F+ETSAL+++NV AFQT++ EIY+I+S+K
Sbjct: 126 KSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 165/223 (73%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +++D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RW+ EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V T + KA AE + FFMETSAL++ NV AF V+T+IY ++S
Sbjct: 119 VIMLVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K+ + KK+ CCSS
Sbjct: 179 KKAL---DIGDDPAAPPKGQTINVGG--KDDVSAVKKSACCSS 216
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + KA AE + FFMETSAL+S NV +F V+T+IY ++SRK + E+
Sbjct: 131 RHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKTL---EIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KK GCCS+
Sbjct: 188 DPAALPKGQTINV-GSRDDVSA-VKKVGCCSA 217
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/219 (56%), Positives = 157/219 (71%), Gaps = 9/219 (4%)
Query: 9 RAE---DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAE DYLFKVVLIGDS VGKSNLL+RFARDEF ++STIGVEF T+ + ++ K VKA
Sbjct: 6 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGAL+VYD+SRR TFD+ RWL E H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVVMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DL+ R V+ + A AE G F METSALD++NV AF V+ +IY+++SR +
Sbjct: 126 GNKADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNAL- 184
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKA-GCCSS 223
++ ++ GKT+ + K E P A GCCSS
Sbjct: 185 --DIGDDPAAPPRGKTIDVSAAKDE--VSPVNAGGCCSS 219
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 156/216 (72%), Gaps = 17/216 (7%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + +
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGDA-- 184
Query: 192 KDSSSFNGKTVVLEGEKKEA-----DAEPK-KAGCC 221
G+TV+ G++++ +PK K GCC
Sbjct: 185 -------GQTVL--GDRRDMVRIDESEDPKTKQGCC 211
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 153/212 (72%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + K AE + FFMETSAL+S NV AF V+T+IY ++SRK L
Sbjct: 131 RHLRAVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKA-----LDV 185
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S++ K + ++ + KKAGCCSS
Sbjct: 186 GDDSTYLPKGQTINVGSRDDVSAVKKAGCCSS 217
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 160/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + + AE + FFMETSAL+S NV AF V+T+IY+++S+K + E+
Sbjct: 131 RHLRAVSTEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSKKAL---EIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KK+GCCS+
Sbjct: 188 DPAALPKGQTINV-GSRDDVSA-VKKSGCCSA 217
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 162/224 (72%), Gaps = 12/224 (5%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M F S R DYLFKVVLIGD+ VGKSNLL+RF R+EF SKSTIGVEF T+ + G
Sbjct: 1 MPFVSV--RPVDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI+++ +FD++ RWL EL H+D N+
Sbjct: 59 KIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ + VTT + A AE+ GL F+ETSALD+SNV AF+++++EIY + S
Sbjct: 119 VIMLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGS 178
Query: 181 RKVMISQELKQKDSSSFNG---KTVVLEGEKKEADAEPKKAGCC 221
+K L++ +S+F +T+V+ E E KA CC
Sbjct: 179 KKA-----LEKGSTSNFAPNATQTIVINPPADEGKTE--KAKCC 215
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 151/210 (71%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+RQT+D++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDAAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ G + DA+ K CC
Sbjct: 187 APT----GGVKIDMAPSGTPDAKGNK--CC 210
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 161/218 (73%), Gaps = 9/218 (4%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFK+VLIGDS VGKSNLL+RF+R+EF SKSTIGVEF T+ + ++ K VKA
Sbjct: 6 RAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGAL+VYDI+R TF+++ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DL+ R V+T + KA AE + FFMETSAL+S NV AF V+TEIY ++ RK +
Sbjct: 126 GNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKAL- 184
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E+ ++ G+T+ + K+ + KK GCCSS
Sbjct: 185 --EVGDDPAALPKGQTINV---GKDDVSAVKKVGCCSS 217
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 162/218 (74%), Gaps = 8/218 (3%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VKA
Sbjct: 28 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKA 87
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+V +LV
Sbjct: 88 QIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLV 147
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DL+ R V+ + K AE + FFMETSAL+S NV +AF V+T+IY ++S+K +
Sbjct: 148 GNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKAL- 206
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ ++ G+T+ + G K+ + KK+GCCSS
Sbjct: 207 --DIGDDPAAPPRGQTINVGG--KDDVSAVKKSGCCSS 240
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 160/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ +WL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + KA AE + FFMETSAL+S NV AF V+T+IY ++SRK + E+
Sbjct: 131 RHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTL---EIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KK+GCCS+
Sbjct: 188 DPAALPKGQTINV-GSRDDVSA-VKKSGCCSA 217
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V +L GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMLAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DL R V+ + + LAE + L +ETSAL++SNV AFQT++ +IY I+S+K + +Q
Sbjct: 126 KTDLNHLRSVSAEDAQMLAEKECLSCLETSALEASNVEKAFQTILLDIYQIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E +S+ T + G K CCS+
Sbjct: 186 E--AANSTGLPQGTTINIG---NLSTNINKKACCSN 216
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + K A L F+ETSALD+SNV AFQ ++TEIY I+S K + E Q
Sbjct: 127 RHLRAVPTEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGEGGQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + V+E K + D E K+ GCC
Sbjct: 187 ---NPLGERRQVVEISKTQ-DTETKQ-GCC 211
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 150/210 (71%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A GL F+ETSALD+SNV AFQ +TEIY I+S K + + +
Sbjct: 127 RHLRAVPTEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKAL---DQGE 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + G + L DA KK CC
Sbjct: 184 QTAGPSQGSAIPLSSSTPPGDAT-KKGQCC 212
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 160/211 (75%), Gaps = 7/211 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+ + ++ AE +GL F+ETSAL+S+NV AFQ ++TEIY I+S+K + S+E
Sbjct: 130 RHLRGVSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEE--- 186
Query: 192 KDSSSFNGK-TVVLEGEKKEADAEPKKAGCC 221
+++ G+ T ++ + D KK GCC
Sbjct: 187 -NATEGPGQGTNIVPLDSNSPDL--KKKGCC 214
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 156/214 (72%), Gaps = 13/214 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF +KSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGALLVYDIS+ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T E KA A GL F+ETSALD+SNV +AFQT++T+IY I+S S+ L+Q
Sbjct: 128 KHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVS-----SKSLEQ 182
Query: 192 KDSS--SFNGKTVVLEGEKKEADAEPKKAG--CC 221
D +G T+ + + P AG CC
Sbjct: 183 SDDPIKPTSGDTITVS----HSVDTPANAGGKCC 212
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/223 (53%), Positives = 162/223 (72%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M Y +D DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MGGYRTDDEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDA 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF++ RWL EL H+D N+
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V T +GK+ AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + + + G+T+ + KE + K+ GCCS+
Sbjct: 180 KRAVEAGDSGSSSGLPSKGQTINV----KEDSSVLKRFGCCST 218
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 165/217 (76%), Gaps = 6/217 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D YLFK+VLIGDS VGKSN+L+RF R+ F +SKSTIGVEF T+ + ++GK +KAQI
Sbjct: 6 DHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQ+F+++ RWL EL H+D ++V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R ++ EGKALAE +GLFF+ETSA+++ NV AFQT++TE+Y I++RK + ++
Sbjct: 126 KSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRKALAAK 185
Query: 188 ELKQKDSSSFN-GKTVVLEGEKKEADAEPKKAGCCSS 223
E ++ + GKT+ + ++ A K CCS+
Sbjct: 186 EAAATTATLPSQGKTISI-----DSTAGNTKRACCST 217
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 140/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E K AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK 179
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 140/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E K AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 129 RHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK 179
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 156/220 (70%), Gaps = 26/220 (11%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKS+LL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ +++++ RWL EL H+D N++ +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R + T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K M
Sbjct: 129 RHLRSIPTEEAKAFAERNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQKQM------- 181
Query: 192 KDSSSFNGKTVVLEGEKKEADAEP---KKAG-------CC 221
+D EG+ DAEP + AG CC
Sbjct: 182 RDPP---------EGDVIRPDAEPADVRAAGADAVRRNCC 212
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 140/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E K AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK 179
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 140/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E K AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK 179
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 150/210 (71%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K Q
Sbjct: 129 RHLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK----QIRDP 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + V K +E + CC
Sbjct: 185 PEGDTIRPQNVEPIDVKPTMSSEGMRKQCC 214
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/218 (55%), Positives = 155/218 (71%), Gaps = 8/218 (3%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + GK +K
Sbjct: 3 SRVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDIS+ TF+++ RWL EL H++ N+V +L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL+ R V T E A +E L F+ETSALD+S V AFQ ++TEIY ++SR+ M
Sbjct: 123 VGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNM 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
++E S+ + ++ G+KK+ GCC+
Sbjct: 183 QAEENANAPMSAGHKISLSQSGDKKK--------GCCA 212
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 155/209 (74%), Gaps = 5/209 (2%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
++F VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAG
Sbjct: 78 FVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 137
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+
Sbjct: 138 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 197
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 192
R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 198 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRREN 255
Query: 193 DSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
D S N VV + +P K CC
Sbjct: 256 DMSPSN--NVVPIHVSPTTENKP-KVQCC 281
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 159/219 (72%), Gaps = 12/219 (5%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF+++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFN---GKTVVLEGEKKEADAEPKKAGCCSS 223
E ++S N G T+ + + K CCS+
Sbjct: 186 E-----AASINLPHGTTINV----GDLSGNMNKRTCCST 215
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 163/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 499 MAAYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 557
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D ++
Sbjct: 558 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHI 617
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK DL+ R V+ + KA AE + FFMETSAL+S NV AF V+T+IY ++S
Sbjct: 618 VIMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVS 677
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
RK + ++ ++ G+T+ + G K + A KKAGCCSS
Sbjct: 678 RKAL---DIGDDPAALPKGQTINV-GTKDDVSA-VKKAGCCSS 715
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 162/226 (71%), Gaps = 14/226 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA +EE+ DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G
Sbjct: 1 MARRAEEEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
VKAQIWDTAGQER+RA+TSAYYRGA+GALLVYD+++ TF+++ RWL EL H+D N+
Sbjct: 59 GTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNK+DLK R V T + + +E +GL F+ETSAL+++NV AFQT++ EIY I+S
Sbjct: 119 VIMLIGNKTDLKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIIS 178
Query: 181 RKVMISQELKQKDSSSFNGK---TVVLEGEKKEADAEPKKAGCCSS 223
+K + S E +S N K T+ + G + A K CC+S
Sbjct: 179 KKSLSSNE-----PASANIKESMTITVGGPQSNAS----KPSCCTS 215
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 154/208 (74%), Gaps = 5/208 (2%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
L +VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQ
Sbjct: 53 LIEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 112
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
ER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+
Sbjct: 113 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 172
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKD 193
R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++ D
Sbjct: 173 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRREND 230
Query: 194 SSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S N VV + +P K CC
Sbjct: 231 MSPSN--NVVPIHVPPTTENKP-KVQCC 255
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF +KSTIGVEF T+ +++ GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGALLVYDIS+ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T E KA A GL F+ETSALD+SNV +AFQT++T+IY I+S K + E
Sbjct: 128 KHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSEDPI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K +S G T+ + + ++ K CC
Sbjct: 188 KPTS---GDTIQVSHSVDQNQSQGGK--CC 212
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 140/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E K AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 129 RHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK 179
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 150/210 (71%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSA D+SNV AFQ ++TEIY I+S K + S +
Sbjct: 127 RHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSGDTPS 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ G + L + D+ K CC
Sbjct: 187 MPQT---GTNIALSNPTE--DSAAKNGKCC 211
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 140/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E K AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK 179
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCCQT 217
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 153/210 (72%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS GKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + +
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALEG----E 182
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+S + +++ EK + D E K GCC
Sbjct: 183 SGGASVGERRQIIDIEKTQ-DTE-NKGGCC 210
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 75
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 135
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 136 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 194
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 195 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 224
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 153/207 (73%), Gaps = 5/207 (2%)
Query: 15 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQE 74
F VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQE
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 60
Query: 75 RFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDA 134
R+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+
Sbjct: 61 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 120
Query: 135 REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDS 194
R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++ D
Sbjct: 121 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRENDM 178
Query: 195 SSFNGKTVVLEGEKKEADAEPKKAGCC 221
S N VV + +P K CC
Sbjct: 179 SPSNN--VVPIHVPPTTENKP-KVQCC 202
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 145/181 (80%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF+++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 188 E 188
E
Sbjct: 186 E 186
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 140/173 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R V T E K A GL F+ETSALD+SNV +AFQT++T+IY I+S K +
Sbjct: 128 KHLRAVPTDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSL 180
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 157/211 (74%), Gaps = 8/211 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +K+QIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD+S+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEI+ I+S S+ L+
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVS-----SKALES 181
Query: 192 KDSSSFN-GKTVVLEGEKKEADAEPKKAGCC 221
DSS+ G V+E K D+E KK GCC
Sbjct: 182 GDSSANQLGDRKVVE-ITKTPDSE-KKPGCC 210
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 151/211 (71%), Gaps = 2/211 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++ + RWL EL H+D ++V +LVGNK+DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIMLVGNKNDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE L F+ETSALDS+NV +AFQ ++T+IY+I+SRK M +
Sbjct: 129 RHLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQILTDIYHIVSRKQMAND--GD 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
D ++ + + + P CC+
Sbjct: 187 ADIAALKNENKITIPPNESRKDPPASKKCCN 217
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF ++KSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + V++ + D E K+ GCC
Sbjct: 187 ---AGLGDRRPVVDINPSQ-DPETKQ-GCC 211
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 159/216 (73%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGA+GALLVYD+++ TF+++ RWL EL H+D N+V +L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DLK R V T + ++ AE +GL F+ETSAL++ NV AFQT+++E+Y I+S+K IS
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK-SISS 184
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ +++ G+T+ + + +P CCSS
Sbjct: 185 DQTTANANIKEGQTIDVAATSESNAKKP----CCSS 216
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 152/211 (72%), Gaps = 5/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCC 221
+S G VV D + P K CC
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCC 215
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 156/214 (72%), Gaps = 10/214 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + GK +KAQIWDTA
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS++++F + +WL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V+T EGK AE L F+ETSALD++NV AF ++TEIY I+ +K + +++
Sbjct: 129 KHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALTNEK--- 185
Query: 192 KDSSSFN---GKTVVLEGEKKEADAEPKKAGCCS 222
+ SF G++VV+ ++ KK CCS
Sbjct: 186 --NPSFKPALGESVVVRDPAEDKGTHKKK--CCS 215
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y + ++ DY+FKVVLIGDSAVGK+ LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 4 LYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKI 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + +WL EL H+D N+V
Sbjct: 64 IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL R V + + LA+ + LFFMETSAL+S+NV F T++TEIY I ++K
Sbjct: 124 MLIGNKCDLGSLRAVPMEDAEELAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKK 183
Query: 183 VMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + S G +++ + E KK GCC
Sbjct: 184 SLTTSDDDIGGSGLLKGSRIIVPNQ--EIYNGGKKGGCC 220
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 152/211 (72%), Gaps = 5/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCC 221
+S G VV D + P K CC
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCC 215
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 165/227 (72%), Gaps = 14/227 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDS 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +K+QIWDTAGQER+RA+TSAYYRGA+GALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKSQIWDTAGQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK+ E + L+F+ETSAL++SNV AF V+T+IYN++S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVS 179
Query: 181 RKVMISQELKQKDSSSFNGK-TVVLEGEK---KEADAEPKKAGCCSS 223
+K + E NG +V +GEK K + K+ GCCS+
Sbjct: 180 KKAVEGAE---------NGTASVPAKGEKIDLKNDVSALKRVGCCST 217
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 157/216 (72%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF+++ RWL EL H+D N+V +L GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMLAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V++ + + LAE + L F+ETSAL++ NV AFQT++ +IY I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E +S +G T+ + +K CCS+
Sbjct: 186 E-SASTTSVPHGTTINVSN----MSGTVEKKSCCSN 216
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 141/177 (79%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLLARF R+EF SKSTIGVEF T+ + +N K +KAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI+++ T+ ++ RWL+EL H+D N+V +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
KSDL+ R V E A AEA L F+ETSALDS+NV AF+ ++TEIYNI+S+K M
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNIVSQKQM 181
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 154/213 (72%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF++++TEIY I+S+K IS
Sbjct: 129 RHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRIVSQK-QISDRSAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+DS G VV D + K CC S
Sbjct: 188 EDSP---GNNVVDISVPPTMDGQRGNKLPCCQS 217
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/167 (68%), Positives = 138/167 (82%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 18 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 77
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 78 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 137
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNI 178
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I
Sbjct: 138 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPTKLQCCQN 217
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 162/223 (72%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +++D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVED 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RW+ EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V T + KA AE Q FFMETSAL++ NV AF V+ +IY ++S
Sbjct: 119 VMMLVGNKADLRHLRAVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G T+ + G K+ + KK+ CCSS
Sbjct: 179 KKAL---DIGDDPAAPPRGHTINVGG--KDDVSAVKKSACCSS 216
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + A AE + FFMETSAL+S NV +AF V+T+IY ++S+K + E+
Sbjct: 121 RHLRAVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKAL---EIGD 177
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KK GCCS+
Sbjct: 178 DPAALPKGQTINV-GSRDDVSA-VKKGGCCSA 207
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 163/223 (73%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAGYRADDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDA 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V T +GK+ AE + L+FMETSAL+++NV AF V+++IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + + E S G+T+ + KE + K+ GCCS+
Sbjct: 180 KKAVEAGEGGSSSSVPSVGQTINV----KEDSSVLKRFGCCSN 218
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 155/217 (71%), Gaps = 3/217 (1%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL+ R V T E +A AE L F+ETSALDS+NV AFQ ++TEIY I+S+K + +
Sbjct: 124 NKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQIRN 183
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S N K + + ++ +K CC +
Sbjct: 184 DADNDPSPSGDNVKAISIAPTDS---SDTRKRQCCQT 217
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 154/210 (73%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGK+NLL+RF R+EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A GL F+ETSALDSSNV AFQ ++TEIY I+S K + S
Sbjct: 128 RHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESSNDVI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ ++ G+T+ + + + E + GCC
Sbjct: 188 RPTA---GQTINV---NQPTEDEKQGGGCC 211
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 151/212 (71%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ TF+++ RWL EL H++ N+V +L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R VT E A+ L F+ETSALD+S V +AFQ ++TEIY ++SRK + +
Sbjct: 129 RHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANTATG 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKK--AGCC 221
D S G+T+ L + +A K AG C
Sbjct: 189 PDLS--RGETIALSSARDDASNRSKSSCAGSC 218
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + A AE + FFMETSAL+S NV AF V+T+IY ++S+K + E+
Sbjct: 131 RHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKAL---EIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KK+GCCS+
Sbjct: 188 DPTALPKGQTIDV-GSRDDVSA-VKKSGCCSA 217
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 157/211 (74%), Gaps = 8/211 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +K+QIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD+S+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEI+ I+S S+ L+
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVS-----SKALES 181
Query: 192 KDSSSFN-GKTVVLEGEKKEADAEPKKAGCC 221
DSS+ G V+E K D+E KK GCC
Sbjct: 182 GDSSANQLGDRKVVE-ITKTPDSE-KKQGCC 210
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 163/216 (75%), Gaps = 7/216 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGA+GALLVYD+++ TF+++ RWL EL H+D N+V +L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DLK R V T + ++ AE +GL F+ETSAL+++NV AFQT+++EIY I+S+K + S+
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKSLSSE 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ +S +GKT+V+ G + + K CCSS
Sbjct: 186 --ESAPASIKDGKTIVVGGPEPDT-----KKTCCSS 214
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/171 (66%), Positives = 140/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 5 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 64
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 65 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 124
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E + AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 125 RHLRSVPTDEARLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK 175
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K + +
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--ADCAA 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
D S G VV D + P K CC +
Sbjct: 187 HDESP--GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 158/213 (74%), Gaps = 10/213 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGD+ VGKSNLL+RF R+EF SKSTIGVEF T+ + GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++ +FD++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ + VTT + A AE+ GL F+ETSALD+SNV AF+++++EIY + S+K L++
Sbjct: 129 QHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKA-----LEK 183
Query: 192 KDSSSFNG---KTVVLEGEKKEADAEPKKAGCC 221
+S+F +T+V+ E E KA CC
Sbjct: 184 GSTSNFAPNATQTIVINPPADEGKTE--KAKCC 214
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 162/223 (72%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAAYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D ++
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK DL+ V+ + KA AE + FFMETSAL+S NV AF V+T+IY ++S
Sbjct: 120 VIMLVGNKGDLRHLXAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
RK + ++ ++ G+T+ + G K + A KKAGCCSS
Sbjct: 180 RKAL---DIGDDPAALPKGQTINV-GTKDDVSA-VKKAGCCSS 217
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K + +
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--ADCAA 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
D S G VV D + P K CC +
Sbjct: 187 HDESP--GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 140/173 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R V T E K A L F+ETSALD+SNV +AFQT++T+IY I+S K +
Sbjct: 128 KHLRAVPTEEAKTFATENELSFIETSALDASNVESAFQTILTDIYRIVSSKTL 180
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 162/223 (72%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
+A+ +EE+ DYLFKVVLIGDS VGKSNLL+RFARDEF +++STIGVEF T+ + ++G
Sbjct: 3 VAYRAEEEY--DYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF++ RWL EL H+D N+
Sbjct: 61 KLVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANI 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V E +A AE F METSAL+S+NV AF V+ EIY ++S
Sbjct: 121 VVMLVGNKADLRHLRAVPPEEARAFAERHRTFSMETSALESTNVEGAFTEVLGEIYRVVS 180
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ GKT+ + G K+ + GCCS+
Sbjct: 181 KKAL---DIGDDPAAPPRGKTINV-GAAKDEVSPVNTGGCCSA 219
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 165/222 (74%), Gaps = 7/222 (3%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A+ ++ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K
Sbjct: 3 AYRADEDY--DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEK 60
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V
Sbjct: 61 VLKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIV 120
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNK+DL+ R V+T E A AE + FFMETSAL+S NV AF V+T+IY+++S+
Sbjct: 121 VMLVGNKADLRHLRAVSTEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSK 180
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
K + E+ ++ G+T+ + G + + A KK GCCS+
Sbjct: 181 KAL---EIGDDPAALPKGQTINV-GSRDDVSA-VKKDGCCSA 217
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 151/212 (71%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K + +
Sbjct: 129 RHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHD 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ G VV D + K CC S
Sbjct: 189 ESP----GNNVVDISVPPTTDGQKNKLPCCQS 216
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 40 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 99
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 100 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 159
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 160 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 218
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 219 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 248
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 152/205 (74%), Gaps = 5/205 (2%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+
Sbjct: 56 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 115
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 116 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 175
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++ D S
Sbjct: 176 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRENDMSP 233
Query: 197 FNGKTVVLEGEKKEADAEPKKAGCC 221
N VV + +P K CC
Sbjct: 234 SNN--VVPIHVPPTTENKP-KMQCC 255
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 139/173 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R V T E KA + GL F+ETSALD NV AAFQ ++T+IY I+S K +
Sbjct: 128 KHLRAVPTDEAKAFSADNGLSFIETSALDGGNVEAAFQNILTDIYRIVSNKAL 180
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 153/208 (73%), Gaps = 4/208 (1%)
Query: 15 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQE 74
F++VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQE
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 75 RFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDA 134
R+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+
Sbjct: 65 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 124
Query: 135 REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDS 194
R V T E KA AE L F+ETSALDS+NV AFQ ++TEIY I+S+K I +S
Sbjct: 125 RAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQK-QIRDSPDDDNS 183
Query: 195 SSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S N +T+ + +A P++ CCS
Sbjct: 184 PSNNVQTIHVAPTD---NAAPRQQKCCS 208
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 140/173 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R V T E KA A L F+ETSALD+SNV +AFQT++T+IY I+S K +
Sbjct: 128 KHLRAVPTDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYRIVSSKSL 180
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 153/211 (72%), Gaps = 5/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S+K + + + Q
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+S G + L +D K G CC
Sbjct: 187 ATIAS--GTNITL--TPPPSDEAAKGGGKCC 213
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 152/212 (71%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEI+ I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQK-QIADRSAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+S G VV D + K CC S
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKNKLPCCQS 216
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ET+ALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 150/209 (71%), Gaps = 3/209 (1%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFKVVLIGDS VGKSNLL+RFAR+EF +SKSTIGVEF T+ ++ +GK +K+QIWDTAG
Sbjct: 8 YLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQIWDTAG 67
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QER+RA+TSAYYRGAVGALLVYDIS+++TF+S+ RWL EL H+D ++V +LVGNKSDLK
Sbjct: 68 QERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLVGNKSDLK 127
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 192
R V T E K A L FMETSALD NV AFQ ++ +Y ++S K M E +
Sbjct: 128 SLRAVPTEEAKEFATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAM-ENESNRV 186
Query: 193 DSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ GK++ + +A+P CC
Sbjct: 187 ATGPGAGKSITV--APTTTNAKPASGKCC 213
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 69 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 128
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 129 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 188
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 189 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 247
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 248 DESP---GNNVVDISVPPTTDGQKPSKLQCCQN 277
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 157/211 (74%), Gaps = 4/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T E KA + L F+ETSALD+SNV +AFQ ++T+IY I+S K + S
Sbjct: 128 KHLRAVPTDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYRIVSSKALDSSGDVI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
K + G+T+++ + A+ + + CC+
Sbjct: 188 KPAG---GETILVAPTADDGGAK-QGSKCCA 214
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 140/173 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R V T E K + GL F+ETSALD+SNV +AFQT++T+IY I+S K +
Sbjct: 128 KHLRAVPTEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL 180
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 154/210 (73%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +K+QIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEI+ I+S K + S + Q
Sbjct: 127 RHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSGDSAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S + K V + K D E K+ GCC
Sbjct: 187 NPLS--DRKVVEI---TKTQDPESKQ-GCC 210
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/171 (66%), Positives = 139/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF S STIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E K AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 129 RHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK 179
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 152/206 (73%), Gaps = 5/206 (2%)
Query: 16 KVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQER 75
VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER
Sbjct: 173 PVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 232
Query: 76 FRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAR 135
+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 233 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 292
Query: 136 EVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSS 195
V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++ D S
Sbjct: 293 AVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRENDMS 350
Query: 196 SFNGKTVVLEGEKKEADAEPKKAGCC 221
N VV + +P K CC
Sbjct: 351 PSN--NVVPIHVPPTTENKP-KVQCC 373
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 154/210 (73%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGK+NLL+RF R+EF SKSTIGVEF T+ + ++ K VK+QIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKSQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A GL F+ETSALDSSNV AFQ ++TEIY I+S K + S
Sbjct: 128 RHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESSNDVI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ ++ G+T+ + + + E + GCC
Sbjct: 188 RPTA---GQTINV---NQPTEDEKQGGGCC 211
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 153/217 (70%), Gaps = 3/217 (1%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL+ R V T E K AE L F+ETSALDS+NV AF ++TEIY I+S+K I
Sbjct: 124 NKSDLRHLRAVPTDESKVFAERNTLSFIETSALDSTNVEQAFVQILTEIYKIVSQK-NIR 182
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+DS S + K + + EP K CC S
Sbjct: 183 DGGNGEDSPSSDVKPITI--PPTHGYTEPNKRKCCQS 217
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 150/213 (70%), Gaps = 8/213 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE L F+ETSALDS+NV AAF ++TEIY +S K +
Sbjct: 129 RHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHVGGDNRAA 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPK-KAGCCSS 223
+ NG + AEP+ K CCSS
Sbjct: 189 ISTPGSNGIVI-------SPTAEPQTKKQCCSS 214
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 159/219 (72%), Gaps = 8/219 (3%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
++ED ++L VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +K
Sbjct: 6 NDEDTTPEFL---VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M
Sbjct: 123 VGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ ++ D S N VV + +PK CC +
Sbjct: 183 --SDRRENDMSPSNN--VVPIHVPPTTENKPKMQ-CCQN 216
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 157/212 (74%), Gaps = 6/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R VTT + A AE + FFMETSAL+S NV AF V+T+I+ ++SRK + ++
Sbjct: 131 RHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSRKAL---DVGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + K+ + KK GCCS+
Sbjct: 188 DPAALPKGQTITV---GKDDVSAVKKVGCCSA 216
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 163/223 (73%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAGYRADDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDA 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V T +GK+ AE + L+FMETSAL+++NV AF V+++IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + + E S G+T+ + KE + K+ GCCS+
Sbjct: 180 KKAVEAGEGGSSSSVPSVGQTINV----KEDFSVLKRFGCCSN 218
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 160/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + + +E + +FMETSAL+S NV +AF V+T+IY ++S+K + E+
Sbjct: 131 RHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSKKAL---EIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KKAGCCS+
Sbjct: 188 DPAALPKGQTINV-GSRDDVSA-VKKAGCCSA 217
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 161/220 (73%), Gaps = 7/220 (3%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y + ++ DY+FKVVLIGDSAVGK+ LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 4 LYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
VKAQIWDTAGQER AVTSAYYRGAVGA+LVYD+++RQ+FD + +WL EL H+D N+V
Sbjct: 64 VKAQIWDTAGQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVI 121
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL R V T + + A+ + LFFMETSAL+++NV AF T++TEIY I+S+K
Sbjct: 122 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKK 181
Query: 183 VMISQELKQKDSSS-FNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + +SS G +++ E++ K+ GCC
Sbjct: 182 SLTADDDDADGNSSLLKGTRIIIPSEQESG----KRGGCC 217
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 160/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF +KSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL +H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + +A AE + +FMETSAL+S NV +F V+T+ Y ++SRK++ ++
Sbjct: 131 RHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKIL---DIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ G+T+ + G K + A KKAGCCSS
Sbjct: 188 DPTVLPKGQTIDI-GSKDDVSA-VKKAGCCSS 217
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF +KSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T E KA + GL F+ETSALD+SNV +AFQT++T+I+ I+S K +
Sbjct: 128 KHLRAVPTEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFRIVSNKSLEPSGDAI 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K SS G T+ + ++A+ K CC
Sbjct: 188 KPSS---GDTLTVSPSVDTSNAQASK--CC 212
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 163/221 (73%), Gaps = 9/221 (4%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A+ ++ED DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K
Sbjct: 3 AYRADEDY--DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDK 60
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+ VGNK+DL+ R V+T + KA AE + +FMETSAL+S NV AF V+T+IY+++SR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSR 180
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
K + ++ ++ G+T+ + K+ + KK GCCS
Sbjct: 181 KAL---DIGDDPAALPKGETINV----KDDVSAVKKVGCCS 214
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 157/216 (72%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVY +++RQTF+++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V++ + + LAE + L F+ETSAL++ NV AFQT++ +IY I+SRK + +Q
Sbjct: 126 KSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E +S +G T+ + + +K CCS+
Sbjct: 186 E-AASTTSLPHGTTINVSN----LSSNVEKKTCCSN 216
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 153/211 (72%), Gaps = 5/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K +KAQ+WDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+R TF+++ RWL EL H+D NVV +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E ++ +E + +FFMETSALD++NV AF V+T+IY ++SRK +
Sbjct: 131 RHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDG----T 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
D S + G K + A K +GCCS
Sbjct: 187 GDPMSLPKGQTIDIGNKDDVTA-VKSSGCCS 216
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 155/210 (73%), Gaps = 5/210 (2%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
+ K+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQ
Sbjct: 31 IIKMVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 90
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
ER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+
Sbjct: 91 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 150
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKD 193
R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++ D
Sbjct: 151 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRREND 208
Query: 194 SSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S N VV + +PK CC +
Sbjct: 209 MSPSNN--VVPIHVPPTTENKPKMQ-CCQN 235
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 159/219 (72%), Gaps = 10/219 (4%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+ED DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + I+ K VK
Sbjct: 4 SDEDY--DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R+ TF+++ RWL EL H+D N+V +L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIML 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK+DL+ R V T E A AE + +FMETSAL+S NV AF V++EIYN++SRK +
Sbjct: 122 VGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKTL 181
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G+T+ L G+ KK GCCS+
Sbjct: 182 ---EKGNDPGALPQGQTINL-GDVSAV----KKPGCCSA 212
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 152/211 (72%), Gaps = 5/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S+K + + + Q
Sbjct: 127 RHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSAQ 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
S G + L +D K G CC
Sbjct: 187 ATIGS--GTNITL--TPPPSDEAAKGGGKCC 213
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 151/210 (71%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS++QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + K A GL F+ETSALD+SNV AFQ + EIY I+S S+ L Q
Sbjct: 127 RHLRAVSTDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVS-----SKALDQ 181
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ S G+ + A+ K CC
Sbjct: 182 GEPSQGPGQGSAIPLGPSNMPADKKSGQCC 211
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + + AE + FFMETSAL+S NV +AF V+T+IY ++S+K + E+
Sbjct: 131 RHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKAL---EIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KK GCCS+
Sbjct: 188 DPAALPKGQTINV-GSRDDVSA-VKKGGCCSA 217
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/172 (66%), Positives = 141/172 (81%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
+ E ++ DY+FKVVLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ + V
Sbjct: 5 HGEFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAIDKRTV 64
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + RWLNEL H+D N+V +
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKNIVIM 124
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
L+GNKSDL R V T + K AE + LFFMETS L+S NV +AFQTV+TEI
Sbjct: 125 LIGNKSDLGTLRAVPTEDAKEFAERENLFFMETSVLESXNVESAFQTVLTEI 176
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 158/219 (72%), Gaps = 8/219 (3%)
Query: 9 RAE---DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAE DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK +KA
Sbjct: 5 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKA 64
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGA+GA+LVYD+S+ TF++I RWL EL H+D N +LV
Sbjct: 65 QIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTRIMLV 124
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DL+ R V T + ++ AEA+GL ++ETSAL+++NV AFQ ++ +IY +S+K +
Sbjct: 125 GNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSKKPVA 184
Query: 186 SQELKQKDSSSFNGKTV-VLEGEKKEADAEPKKAGCCSS 223
S E+ GKT+ V G ADA K CCS+
Sbjct: 185 SDEVGAGQGGVKEGKTIDVATG----ADAAAHKKQCCSA 219
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 152/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+R +TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 163/225 (72%), Gaps = 10/225 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T +GK+ AE + L+F+ETSAL++ NV AF V+T+IY+I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP--KKAGCCSS 223
+K + E + S+S V +GEK E + CCSS
Sbjct: 180 KKAV---EGGENGSAS----AVPAQGEKINIKDESGLNRIKCCSS 217
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 113/165 (68%), Positives = 137/165 (83%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 27 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 86
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 87 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 146
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY
Sbjct: 147 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D ++V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF R+EF ++KSTIGVEF T+ + + GK +KAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGALLVYDIS+R +++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T E +A A GL F+ETSALD+SNV +AF+T +T+IY I+S + + E
Sbjct: 128 KHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTL---ESSA 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ +G TV + G +++A+ + GCC
Sbjct: 185 NPIEAPSGNTVSV-GPSLDSNAK-QSNGCC 212
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 158/218 (72%), Gaps = 7/218 (3%)
Query: 9 RAE---DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAE DYLFKVVLIGDS VGKSNLL+RFARDEF ++STIGVEF T+ + ++ + VKA
Sbjct: 11 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKA 70
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGAL+VYD++RR TF++ RWL EL H+D N+V +LV
Sbjct: 71 QIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVMLV 130
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DL+ R V + +A AEA G F METSAL+++NV AF V+ +IY ++SR +
Sbjct: 131 GNKADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNAL- 189
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ ++ G+T+ + K +A +GCCSS
Sbjct: 190 --DIGDDPAAPPRGRTIDVSA-KDDAVTPVNSSGCCSS 224
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 150/210 (71%), Gaps = 7/210 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R VTT E KA A L F+ETSALD+SNV AFQ ++TEIY I+S KV+ E
Sbjct: 127 RHLRAVTTDEAKAFAAENHLSFIETSALDASNVELAFQNILTEIYRIVSSKVLPENE--- 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S + + L + K K CC
Sbjct: 184 -HGGSIPDRGIPLSDQPKNDQGGGK---CC 209
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 153/211 (72%), Gaps = 3/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ +++ GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + + AE Q L F+ETSALDS+NV AFQ ++TEIY I+S+K + +
Sbjct: 128 RHLRAVPTEDARNYAERQSLSFIETSALDSTNVETAFQNILTEIYKIVSQKQLGDSD--- 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ + V + + KK+GCC+
Sbjct: 185 RGGDLPDNDVVDIHVPDSTPGNQRKKSGCCN 215
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 149/186 (80%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y E ++ DY+FKVVLIGDSAVGK+ LLARFA+++F +SK+TIGVEFQT+ + I+ K
Sbjct: 5 LYGEYNQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKT 64
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD++ +WL EL H+D N+V
Sbjct: 65 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVV 124
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL R V T + + A+ + LFFMETSAL+S+NV AF T++TEIY ++S+K
Sbjct: 125 MLIGNKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKK 184
Query: 183 VMISQE 188
+ + +
Sbjct: 185 TLTAND 190
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 152/205 (74%), Gaps = 5/205 (2%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+
Sbjct: 3 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 62
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 63 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 122
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++ D S
Sbjct: 123 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRENDMSP 180
Query: 197 FNGKTVVLEGEKKEADAEPKKAGCC 221
N VV + +P K CC
Sbjct: 181 SNN--VVPIHVPPTTENKP-KVQCC 202
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 154/216 (71%), Gaps = 11/216 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K IS
Sbjct: 129 RHLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QISDRSAH 187
Query: 192 KDSSSFNGKTVVL----EGEKKEADAEPKKAGCCSS 223
+S N + L EG++ K CC S
Sbjct: 188 DESPGNNVVDISLPPTTEGQRG------NKLPCCQS 217
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 152/208 (73%), Gaps = 6/208 (2%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
+ VVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQ
Sbjct: 3 VLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 62
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
ER+RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D N+V +LVGNKSDL+
Sbjct: 63 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 122
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKD 193
R V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + + + Q
Sbjct: 123 LRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGDSGQAP 182
Query: 194 SSSFNGKTVVLEGEKKEADAEPKKAGCC 221
SS G+T+ + K D E K+ GCC
Sbjct: 183 LSS--GRTIEVS---KAPDTESKQ-GCC 204
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 152/205 (74%), Gaps = 5/205 (2%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++ D S
Sbjct: 121 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRENDMSP 178
Query: 197 FNGKTVVLEGEKKEADAEPKKAGCC 221
N VV + +PK CC
Sbjct: 179 SNN--VVPIHVPPTTENKPKMQ-CC 200
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 152/210 (72%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI++ T++++ RWL EL H+D N+V +L GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIMLAGNKCDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T E K AE L F+ETSALDS+NV AAFQ ++TEIYNI+ +K
Sbjct: 129 RHLRAVSTEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILTEIYNIVIQKAPADGGQGG 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S S +T V++ + ++ + K CC
Sbjct: 189 GGSVS---ETKVIKIDDQKDEKSGSKMKCC 215
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 158/219 (72%), Gaps = 12/219 (5%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+E SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF+++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFN---GKTVVLEGEKKEADAEPKKAGCCSS 223
E ++S N G T+ + + K CCS+
Sbjct: 186 E-----AASINLPHGTTINV----GDLSGNMNKRTCCST 215
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 163/223 (73%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA+ +++D DYLFKVVLIGDS VGKSNLL RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAYRADDDY--DYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDD 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 59 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V + KA AE + +F ETSAL++ NV AF V+T+IY ++S
Sbjct: 119 VIMLVGNKADLRHLRAVPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+T+ + G K + A KKAGCCSS
Sbjct: 179 KKAL---DIGDDPAAPPRGQTINV-GSKDDVSA-VKKAGCCSS 216
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY FKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIVVMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + A AE + FFMETSAL+S NV AF V+T+IY ++S+K + E+
Sbjct: 131 RHLRAVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSKKAL---EIGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + G + + A KK+GCCSS
Sbjct: 188 DPAALPKGQTINV-GSRDDVSA-VKKSGCCSS 217
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 150/216 (69%), Gaps = 9/216 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL+ R V T E K AE L F+ETSALDS+NV AAF ++TEIY +S K + S
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGS- 183
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D + G + + EP K CC+S
Sbjct: 184 -----DRQGYGGGSGTI---IPAPPTEPPKKQCCNS 211
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 149/190 (78%), Gaps = 1/190 (0%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I+
Sbjct: 1 MAGYKGDDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDA 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V T +GK+ AE + L+FMETSAL+++NV AF V+++IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVS 179
Query: 181 RKVMISQELK 190
++ + QE +
Sbjct: 180 KRTVARQECQ 189
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 153/214 (71%), Gaps = 13/214 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS---QE 188
+ R V T E KA A L F+ETSA D+SNV AFQ ++TEIY I+S K + S Q
Sbjct: 127 RHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSGDAQA 186
Query: 189 LKQKDSSSFNGKTVVLEGEKKEADAEPKKAG-CC 221
+ Q G T+ L K AD + G CC
Sbjct: 187 IPQ------GGTTIPL---SKTADDGAGQGGKCC 211
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 141/173 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGALLVYDI++ ++ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R V T E KA + GL F+ETSALD++NV +AFQT +T+IY I+SR+ +
Sbjct: 128 KHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYRIVSRQTL 180
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 138/171 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E + AE GL F+ETSALDS+NV AF ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEARTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQK 179
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/233 (51%), Positives = 160/233 (68%), Gaps = 24/233 (10%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM----------- 56
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ +
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLLSLSLN 65
Query: 57 ------DINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLN 110
D GK VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF+++ RWL
Sbjct: 66 LDNFPPDQFGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLR 125
Query: 111 ELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQT 170
EL H+D N+V ++ GNKSDL R V +G++LAE +GL F+ETSAL+++N+ AFQT
Sbjct: 126 ELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQT 185
Query: 171 VVTEIYNILSRKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++EIY+I+S+K + +QE + + G+ + A + GCCS+
Sbjct: 186 ILSEIYHIISKKALAAQEA----AGNLPGQGTAINISDSSA---TNRKGCCST 231
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 149/212 (70%), Gaps = 6/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 34 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 93
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 94 GQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSDL 153
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE L F+ETSALDS+NV AAF ++TEIY +S K + Q
Sbjct: 154 RHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHFGGDDRVQ 213
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
NG + D + KK CCS+
Sbjct: 214 VSPVGTNGIVI-----SPTTDPQTKKQ-CCSN 239
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 158/212 (74%), Gaps = 6/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H++ N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R VTT + A AE + FFMETSAL+S NV AF V+T+IY+++SRK + ++
Sbjct: 131 RHLRAVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSRKAL---DVGD 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ G+T+ + K+ + KK GCCS+
Sbjct: 188 DPAALPKGQTINV---GKDDVSAVKKVGCCSA 216
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 154/213 (72%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K IS
Sbjct: 129 RHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QISDRSGH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
++S G VV D++ K CC S
Sbjct: 188 EESP---GNNVVDISLPPTTDSQRGGKLPCCQS 217
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 152/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K IS
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QISDRSAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 152/218 (69%), Gaps = 7/218 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K DL+ R V T E K AE L F+ETSALDS+NV AF ++TEIY I+S++
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQR----- 179
Query: 188 ELKQ--KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+L++ +D + V K E + CC+S
Sbjct: 180 QLREPAEDEVTIRPNNVETINVKPTVSTENVRRQCCNS 217
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 154/212 (72%), Gaps = 10/212 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYL+K+VLIGDS VGKSNLL+RF R+EF +KSTIGVEF T+ + GK +KAQ+WDTA
Sbjct: 11 DYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++ T+ S+ RW+ EL ++D N+ +LVGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ REV+T E K +E L F+ETSALDSSNV AFQ ++T+IY+I+SR +
Sbjct: 131 RHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTGPQTT 190
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPK--KAGCC 221
DS N +T++L +EP K+GCC
Sbjct: 191 IDS---NTETIIL-----PTTSEPPAAKSGCC 214
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 152/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S++ I+
Sbjct: 129 RHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQR-QIADRSAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEP-KKAGCCSS 223
DS G VV D + K CC S
Sbjct: 188 DDSP---GNNVVDISVPPTMDGQRGNKLPCCQS 217
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 156/219 (71%), Gaps = 8/219 (3%)
Query: 9 RAE---DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAE DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK +KA
Sbjct: 6 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGA+GA+LVYD+S+ TFD+I RWL EL H+D N+ +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRIMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DLK R V T + AEA+GL ++ETSAL+++NV AFQ ++ +IY +S+K +
Sbjct: 126 GNKTDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVA 185
Query: 186 SQELKQKDSSSFN-GKTVVLEGEKKEADAEPKKAGCCSS 223
S E + GKT+ + DA +K CCS+
Sbjct: 186 SDEGGAGAAGGVKEGKTINVAA----GDANSEKKQCCST 220
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 142/176 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLF+VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K M+ +
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMVDR 184
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 137/167 (82%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 6 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G ER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 66 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNI 178
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I
Sbjct: 126 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 172
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 149/210 (70%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A A L F+ETSA+D+SNV AFQ ++T+IY I+S K + S
Sbjct: 128 RHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKALESSADAV 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+S G T+ + +A CC
Sbjct: 188 GPTS---GSTITVTPTSDDASKASGGGKCC 214
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 148/210 (70%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K AE L F+ETSALDS+NV AFQ ++TEIY I+S K Q
Sbjct: 129 RHLRAVPTDEAKNFAERNALSFIETSALDSTNVETAFQNILTEIYRIVSXK----QIRDP 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + V K + E + CC
Sbjct: 185 PEGETIRPQNVEAIDVKPTVNTESVRKQCC 214
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 149/212 (70%), Gaps = 9/212 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E K AE L F+ETSALDS+NV AAF ++TEIY +S K + S
Sbjct: 129 RHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGS----D 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ G T++ EP K CC+S
Sbjct: 185 RQGYGGGGGTII-----PAPPTEPPKKQCCNS 211
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 155/216 (71%), Gaps = 11/216 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV +F+ ++TEIY I+S+K M +
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQM-ADRAAH 187
Query: 192 KDSSSFN----GKTVVLEGEKKEADAEPKKAGCCSS 223
+DS N T ++G++ K CC +
Sbjct: 188 EDSPGNNVVDISVTPTMDGQR------SVKLQCCQN 217
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 153/212 (72%), Gaps = 9/212 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + K A L F+ETSALD++NV AFQ ++TEIYNI+S K ++ K+
Sbjct: 127 RHLRAVPTDDAKNFAAENHLSFIETSALDATNVELAFQNILTEIYNIVSTKSFAEEDGKK 186
Query: 192 KDSSSFNGKTVVL--EGEKKEADAEPKKAGCC 221
D G + L EG K E+ GCC
Sbjct: 187 FDPRE-GGTNITLSQEGPKGES------KGCC 211
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 156/224 (69%), Gaps = 20/224 (8%)
Query: 12 DYLFK--------------VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMD 57
D+LFK +VLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ +
Sbjct: 7 DFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQ 66
Query: 58 INGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSD 117
++ K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D
Sbjct: 67 VDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHAD 126
Query: 118 MNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYN 177
N+V +LVGNKSDL+ R V T E K A L F+ETSALD+SNV AFQ ++TEIY
Sbjct: 127 SNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYR 186
Query: 178 ILSRKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
I+S K + + + Q SS G+T+ + K D E K+ GCC
Sbjct: 187 IVSSKALDNGDSGQAPLSS--GRTIEV---SKAPDTESKQ-GCC 224
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K IS
Sbjct: 129 RHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QISDRSGH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D++ K CC S
Sbjct: 188 DESP---GNNVVDISLPPTTDSQRGGKLPCCQS 217
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 155/215 (72%), Gaps = 10/215 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++ F +SKSTIGVEF T+ + + K +KAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIWDTA 75
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD+++ TF+++ RWL EL H+D N+V +L+GNK+DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKTDL 135
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V + + AE++GLFF+ETSALD++NV AF TV+ EIY I+S+K + S+E
Sbjct: 136 RHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFHTVLAEIYRIISKKPLSSEE--- 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKA---GCCSS 223
S G + EG+ + A A CCSS
Sbjct: 193 ----SGLGSGNLREGQSIQVSATNSGALTSRCCSS 223
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 155/216 (71%), Gaps = 11/216 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV +F+ ++TEIY I+S+K M +
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQM-ADRAAH 187
Query: 192 KDSSSFN----GKTVVLEGEKKEADAEPKKAGCCSS 223
+DS N T ++G++ K CC +
Sbjct: 188 EDSPGNNVVDISVTPTMDGQR------SIKLQCCQN 217
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 150/216 (69%), Gaps = 9/216 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL+ R V T E K AE L F+ETSALDS+NV AAF ++TEIY +S K + +
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGT- 183
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D + G + + EP K CC+S
Sbjct: 184 -----DRQGYGGGSGTI---IPAPPTEPPKKQCCNS 211
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 151/216 (69%), Gaps = 2/216 (0%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+ +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VK
Sbjct: 2 ANKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVIML 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK+DL+ R V T E KA AE L F+ETSALDS+NV AAF ++T+IY+I+S+K +
Sbjct: 122 VGNKNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQI 181
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGC 220
S+ D S + D K C
Sbjct: 182 RSE--GDNDPSPSRDNIPITIAPTDPTDNRKKSCAC 215
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 154/215 (71%), Gaps = 4/215 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +GK +KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+R +F++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R VTT EG+ A+A+GL F+ETSALD+S+V AF ++T+IY ++ ++ + S +
Sbjct: 130 KHLRAVTTEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKRHLASGDPTV 189
Query: 192 KDSSSF----NGKTVVLEGEKKEADAEPKKAGCCS 222
S+S G+ + D K CCS
Sbjct: 190 AKSASGAVYQAGRGETISVGNLSHDNRSSKRKCCS 224
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 159/224 (70%), Gaps = 14/224 (6%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S +D D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +K
Sbjct: 2 SSKDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMA 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK-- 182
VGNK DL+ R V T E KA +E GL F+ETSALDS+NV AFQ ++TEIY+I+S+
Sbjct: 122 VGNKCDLRHLRAVPTEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQSST 181
Query: 183 ---VMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
V + EL ++ + EG++++A K CC S
Sbjct: 182 ANDVPSAPELGERTT------IKPTEGDQQQASG---KRQCCRS 216
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 139/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 164/227 (72%), Gaps = 15/227 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRADDEY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ WL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T + K+ AE + L+FMETSAL+++NV AF V+T+I++I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEK----KEADAEPKKAGCCSS 223
+K M + S S N V +G+K K+ A KK GCCS+
Sbjct: 180 KKAM------EAASESAN---VPSKGDKIDIGKDVSA-VKKGGCCSN 216
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDS 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V+T +GK+ AE + L+FMETSAL+++NV AF V+T+IY+I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVS 179
Query: 181 RKVM 184
+K +
Sbjct: 180 KKAV 183
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 164/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D D+L+KVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAAYRADDDY-DFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDE 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H++ N+
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+T + KA AE + FFMETSAL++ NV AF V+++IY + S
Sbjct: 120 VIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVAS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+++ + G K + +E KK GCCSS
Sbjct: 180 KKAL---DIGDDHTTLPKGQSINV-GSKDDV-SEVKKVGCCSS 217
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 160/220 (72%), Gaps = 9/220 (4%)
Query: 9 RAE---DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAE DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK +KA
Sbjct: 5 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKA 64
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGA+GA+LVYD+S+ TF++I RWL EL H+D N+ +LV
Sbjct: 65 QIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIRIMLV 124
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DL+ R V T + ++ AEA+GL ++ETSAL+++NV AFQ ++ +IY +S+K +
Sbjct: 125 GNKTDLRHLRAVATDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVA 184
Query: 186 SQELKQKDSSSFN-GKTV-VLEGEKKEADAEPKKAGCCSS 223
S E Q + GKT+ V G DA +K CCS+
Sbjct: 185 SDESGQGAAGGVKEGKTINVATG----GDAAAEKKQCCSA 220
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 151/210 (71%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ TFD++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V + + AE +GL FMETSAL+S+NV +FQ+++TEIY I+ RK + ++E
Sbjct: 130 SHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLAAEEAAS 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S V +A+ KK CC
Sbjct: 190 AGPSQGTPINV------SDAETIAKKRSCC 213
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 139/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 149/210 (70%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALL YD+++ QTFD++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + KA A GL F+ETSALD+SNV AFQ +TEIY I+S K + +
Sbjct: 127 RHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDND--AG 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ G ++ L + KK CC
Sbjct: 185 SAGAPGQGTSIPLSSSNPPG-GDAKKGQCC 213
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 148/204 (72%), Gaps = 4/204 (1%)
Query: 18 VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFR 77
VLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQER+R
Sbjct: 16 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYR 75
Query: 78 AVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREV 137
A+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL+ R V
Sbjct: 76 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAV 135
Query: 138 TTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSF 197
T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + E Q +
Sbjct: 136 PTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGEGGQ---NVL 192
Query: 198 NGKTVVLEGEKKEADAEPKKAGCC 221
G+ VLE K AD KK GCC
Sbjct: 193 GGERKVLE-ISKSADEGQKKNGCC 215
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 156/220 (70%), Gaps = 14/220 (6%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + I K VKAQI
Sbjct: 5 DEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYD +R TF+++ RWL EL H+D VV +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DLK + V+T E AE + ++FMETSAL+S NV AF V+T+IYN++S+K + +
Sbjct: 125 KADLKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTLEKE 184
Query: 188 ELKQKDSSSFNGKTVVLEGEK----KEADAEPKKAGCCSS 223
NG V +GE K+ ++ KK+GCCS+
Sbjct: 185 ----------NGSASVPKGETINIGKDDVSDVKKSGCCST 214
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 152/210 (72%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ TFD++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V + + AE +GL FMETSAL+S+NV +FQ+++TEIY I+ RK + ++E
Sbjct: 130 SHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLAAEEAAS 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S G + +A+ KK CC
Sbjct: 190 AGPS--QGTPI----NASDAETIAKKRSCC 213
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 154/211 (72%), Gaps = 4/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ TF+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + K AE L F+ETSALD++NV AFQ ++TEIY I+S K +
Sbjct: 127 RHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNGPSGS 186
Query: 192 KDS-SSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + +G+++ L + A+ K+GCC
Sbjct: 187 NEGHQNLSGQSISL---SQTANDPQAKSGCC 214
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 138/177 (77%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLF+VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQI
Sbjct: 5 DEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K DL+ R V T E K AE L F+ETSALDS+NV AF ++TEIY I+SRK +
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSRKSL 181
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 164/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D D+L+KVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAAYRADDDY-DFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDE 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H++ N+
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+T + KA AE + FFMETSAL++ NV AF V+++IY + S
Sbjct: 120 VIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVAS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+++ + G K + +E KK GCCSS
Sbjct: 180 KKAL---DIGDDPATLPKGQSINV-GSKDDV-SEVKKVGCCSS 217
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 161/222 (72%), Gaps = 6/222 (2%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A+ +E+D DYLFKVVL GDS VGKSNLL+RF R++F +S++TIGVEF T+ + + K
Sbjct: 3 AYRAEDDY--DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNK+DL+ R ++T E KA AE + FFMETSAL++ NV AF V+T+IY ++S+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
K + E +++ ++ G + + A KK GCCS+
Sbjct: 181 KAL---EAGDDPTTALPKGQMINVGSRDDISA-VKKPGCCSA 218
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 154/211 (72%), Gaps = 4/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ TF+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + K AE L F+ETSALD++NV AFQ ++TEIY I+S K +
Sbjct: 127 RHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNGPSGS 186
Query: 192 KDS-SSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + +G+++ L + A+ K+GCC
Sbjct: 187 TEGHQNLSGQSISL---SQTANDPQAKSGCC 214
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 162/222 (72%), Gaps = 20/222 (9%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKS++L+RF R+EF +SKSTIGVEF T+ ++++ K +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS++ +F ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAE-----------AQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
K R V TAE ++ E + + F+ETSALDS+NV AAFQ ++T+IY +++
Sbjct: 129 KHLRAVPTAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILTDIYQLVA 188
Query: 181 RKVMISQELKQKDS-SSFNGKTVVLEGEKKEADAEPKKAGCC 221
K L+ DS NG+T+ ++ +D++ KKAGCC
Sbjct: 189 TKA-----LEGGDSIKPTNGETINVQ---PTSDSDNKKAGCC 222
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 152/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K + E
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--AERSA 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
D S G VV D + K CC +
Sbjct: 187 HDESP--GNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 161/223 (72%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++
Sbjct: 1 MGAYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+T + K AE + FFMETSAL+S NV AF V+T+IY ++S
Sbjct: 120 VIMLVGNKADLRHLRAVSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + E+ ++ G+T+ + G K + A KK GC S+
Sbjct: 180 KKTL---EIGDDPAALPKGQTINV-GSKDDVSA-VKKVGCYSA 217
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 152/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ V+TEIY I+S+K + +
Sbjct: 129 RHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTEIYRIVSQKQIADRSAHD 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEP-KKAGCCSS 223
+ G VV +D + K CC S
Sbjct: 189 ESP----GNNVVDISVPPTSDGQKGNKIQCCQS 217
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/218 (54%), Positives = 157/218 (72%), Gaps = 15/218 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK +KAQIWDTA
Sbjct: 17 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTA 76
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGA+GA+LVYD+++ TF++I RWL EL H+D N+ +LVGNK+DL
Sbjct: 77 GQERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTDL 136
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R VTT + + AEA+GL ++ETSAL++ NV AFQ ++ +IY +S+K + S+E +
Sbjct: 137 KHLRAVTTDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYRTISKKAVASEEDRA 196
Query: 192 KDSSSFNGKTVVLE------GEKKEADAEPKKAGCCSS 223
+ GKT+ + GEKK+ CCS+
Sbjct: 197 AAAGVKEGKTINVAATASDGGEKKQ---------CCSA 225
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 141/173 (81%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D YLFK+VLIGDS VGKSN+L+RF R+ F +SKSTIGVEF T+ + + GK +KAQI
Sbjct: 6 DHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQ+F+++ RWL EL H+D ++V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
KSDL R V+ +GKALAE +GLFF+ETSA+++ NV AFQT++ E+Y I++
Sbjct: 126 KSDLTHLRSVSEDQGKALAEKEGLFFLETSAMEAVNVEEAFQTIIAEVYGIVN 178
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 156/213 (73%), Gaps = 10/213 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGD+ VGKSNLL+RF R+EF SKSTIG EF T+ + GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++ +FD++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ + VTT + A AE+ GL F+ETSALD+S V AF+++++EIY + S+K L++
Sbjct: 129 QHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYRLGSKKA-----LEK 183
Query: 192 KDSSSFNG---KTVVLEGEKKEADAEPKKAGCC 221
+S+F +T+V+ E E KA CC
Sbjct: 184 GSTSNFAPNATQTIVINPPADEGKTE--KAKCC 214
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 162/225 (72%), Gaps = 10/225 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++G
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQ R+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T +GK+ AE + L+F+ETSAL++ NV AF V+T+IY+I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP--KKAGCCSS 223
+K + E + S+S V +GEK E + CCSS
Sbjct: 180 KKAV---EGGENGSAS----AVPAQGEKINIKDESGLNRIKCCSS 217
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 157/223 (70%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y D DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + G
Sbjct: 1 MASY-RADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALL+YD++R TF++ RWL EL H+D N+
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNK DL+ V T E KA AE + L+FMETSALD++NV +AF V+++I+ I+S
Sbjct: 120 VVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + DS+ GK + KE + K+ GCCS+
Sbjct: 180 KRSVDG----GGDSTELPGKGETI--NVKEDGSVLKRMGCCSN 216
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 138/177 (77%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K DL+ R V T E K AE L F+ETSALDS+NV AF ++TEIY I+S+K +
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKSL 181
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 136/165 (82%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 27 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 86
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G ER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 87 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 146
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY
Sbjct: 147 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 162/223 (72%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M Y ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++
Sbjct: 1 MGAYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDE 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D ++
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL R V+T + KA AE + FF+ETSAL+S+NV AF V+T+IY+++S
Sbjct: 120 VIMLVGNKADLGHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
RK + E + ++ G+T+ + K+ + K GCCS+
Sbjct: 180 RKAL---ETGDEAATVPKGQTINV---GKDDVSAIKIGGCCSA 216
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 139/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 57 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 116
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 117 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 176
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 177 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 227
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 156/215 (72%), Gaps = 5/215 (2%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
E D+L K+VLIGDS VGK+NLL+RFARD+F P+SKSTIGVEF T+ ++I GK VKAQ
Sbjct: 2 EGSEPDFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQ 61
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGA+GALL+YDI+ TF+S+ RWL EL ++D N+V +LVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVG 121
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL++ R V+T +G ++ + L F+ETSA +++NV AF T++TEI + LS++ ++S
Sbjct: 122 NKSDLQELRAVSTEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEIVHRLSKQNIVS 181
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
DS + G + AD + KK CC
Sbjct: 182 -----PDSPAKVGPNKGVTITSTTADDKKKKNTCC 211
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 155/212 (73%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++ F +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIWDTA 75
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD+++ TF+++ RWL EL H+D N+V +L+GNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKIDL 135
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V + + AE++GLFF+ETSALD++NV AFQTV+ EIY I+S+K + S+E
Sbjct: 136 RHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFQTVLAEIYRIISKKPLSSEESGS 195
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ G+++ + A + CCSS
Sbjct: 196 GSGNLREGQSIQVSATNSSA----LTSRCCSS 223
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 151/216 (69%), Gaps = 2/216 (0%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+ +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VK
Sbjct: 2 ANKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAV ALLVYDI++ T++++ RWL EL H+D N+V +L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVIML 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK+DL+ R V T E KA AE L F+ETSALDS+NV AAF ++T+IY+I+S+K +
Sbjct: 122 VGNKNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQI 181
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGC 220
S+ D S + D+ K C
Sbjct: 182 RSE--GDNDPSPSRDNIPITIAPTDPTDSRKKSCAC 215
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 152/210 (72%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD ++ QTF + RWL EL H+D N+V +LVGNK D
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQ 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R + T +G AEA+ L F+ETSALD++NV AFQ ++TEIY I+S K + E
Sbjct: 127 KHVRAIKTDQGAEFAEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL---ENGN 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + VV + ++ADA+ K CC
Sbjct: 184 SGQNPLGDRKVVEITKSQDADAKQK---CC 210
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 138/171 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRG VGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 161/222 (72%), Gaps = 6/222 (2%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A+ +E+D DYLFKVVL GDS VGKSNLL+RF R++F +S++TIGVEF T+ + + K
Sbjct: 3 AYRAEDDY--DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNK+DL+ R ++T E KA AE + FFMETSAL++ NV AF V+T+IY ++S+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
K + E +++ ++ G + + A KK GCCS+
Sbjct: 181 KAL---EAGDDPTTALPKGQMINVGGRDDISA-VKKPGCCSA 218
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 150/206 (72%), Gaps = 6/206 (2%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQER+
Sbjct: 9 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 68
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 69 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRA 128
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q +
Sbjct: 129 VPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGAQATIGA 188
Query: 197 FNGKTVVLEGEKKEADAEPKKAG-CC 221
G + L K AD E K+G CC
Sbjct: 189 --GTNISL---SKAADDEASKSGKCC 209
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I++
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIAERSAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + K CC +
Sbjct: 188 GESP---GNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 151/206 (73%), Gaps = 7/206 (3%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQER+
Sbjct: 31 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 90
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 91 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 150
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI-SQELKQKDSS 195
V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K +I + Q S
Sbjct: 151 VPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAIIEGGDSGQATLS 210
Query: 196 SFNGKTVVLEGEKKEADAEPKKAGCC 221
S G+T+ + K D E K+ GCC
Sbjct: 211 S--GRTIEV---SKTPDTESKQ-GCC 230
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 154/211 (72%), Gaps = 4/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF R+ F +SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 16 DYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTA 75
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD+++ TF+++ RWL EL H+D N+V +L+GNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDL 135
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V+ + + AE +GL F+ETSALD++NV AFQTV+TEIY I+S+K + + E
Sbjct: 136 KHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKALAADEAGA 195
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ G+++ + D+ + CCS
Sbjct: 196 GAGAVREGQSIQVSA----TDSSSFTSRCCS 222
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 158/218 (72%), Gaps = 3/218 (1%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDIN-GKEVKA 65
+D DYL+K+VLIGDS VGKSN+L+RF RDEF SKSTIGVEF T+ + ++ GK +KA
Sbjct: 4 KDEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQ+F+++ RWL EL H+D N+V +LV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDLK R V+ E A + L F+ETSALD++NV AF ++ EIY +L +K I
Sbjct: 124 GNKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIY-LLRQKKQI 182
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ Q + G+ + L+ E+ ++ + GCCS+
Sbjct: 183 -EDNPQSTTQPGRGQKIHLDEERTDSQIRQSRRGCCSA 219
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 142/181 (78%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + GK +KAQ
Sbjct: 4 DDNEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYD+++ TF+++ RWL EL H++ N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDLK R V T E A+AE L F+ETSALD+S V AFQ ++TEIY ++++K + S
Sbjct: 124 NKSDLKPQRAVPTEEAMAMAEQHNLAFIETSALDASGVDIAFQNILTEIYRLMNKKQLAS 183
Query: 187 Q 187
+
Sbjct: 184 E 184
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 149/210 (70%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ ++++ K VKAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T E K + L F+ETSALD+SNV +AFQT++T++Y I+S K + +
Sbjct: 128 KHLRAVPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYRIVSTKSL------E 181
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ S T ++ A K CC
Sbjct: 182 QSSDPIRAPTSDTIPVAIDSSAPTKNGSCC 211
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 135/165 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 62
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G ER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V LVGNKSDL
Sbjct: 63 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKSDL 122
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY
Sbjct: 123 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 138/171 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+ +K
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQK 179
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 139/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 151/213 (70%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K + +
Sbjct: 129 RHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHD 188
Query: 192 KDSSSFNGKTVVLEGEKKEADAEP-KKAGCCSS 223
+ G VV D + K CC S
Sbjct: 189 ESP----GNNVVDISVPPTTDGQKGNKLQCCQS 217
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 135/165 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G ER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V LVGNKSDL
Sbjct: 69 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 112/173 (64%), Positives = 139/173 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS++ T+D++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
+ R V T + K A L F+ETSALDS+NV AFQT++TEIY I+S K +
Sbjct: 127 RHLRAVPTEDAKNFAAENHLSFIETSALDSTNVELAFQTILTEIYRIVSSKAL 179
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 139/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 138/171 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 62
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+R +TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 63 GQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 122
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 123 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 173
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 139/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+ED DYLFK VLIGDS VGKSNLL RF R+EF SKSTIGVEF T+ + ++ K++K
Sbjct: 2 SQEDEY-DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIK 60
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI+++ +FD++GRWL EL H+D N+V +L
Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIML 120
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK+DL R V+T E +A A L F+ETSA+D+SNV AFQTV+TEI+ I+S + M
Sbjct: 121 VGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAM 180
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 139/171 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRIVSQK 179
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 154/214 (71%), Gaps = 12/214 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++ F +SKSTIGVEF T+ + GK +KAQIWDTA
Sbjct: 17 DYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQIWDTA 76
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD+++ TF+++ RWL EL H+D N+V +L+GNK+DL
Sbjct: 77 GQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNKTDL 136
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T + AE +GL F+ETSALD++NV AFQTV+ EI+ ++S+K + +++
Sbjct: 137 RHLRSVATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEIHRVISKKALTTED--- 193
Query: 192 KDSSSFNGKTVVLEGEK-KEADAEPKKAG--CCS 222
+G VV EG+ + EP CCS
Sbjct: 194 ------SGAGVVGEGQSILVSGGEPTSVSSRCCS 221
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 148/211 (70%), Gaps = 8/211 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA AE L F+ETSALDS+NV AAF ++TEIY R V Q
Sbjct: 129 RHLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIY----RSVSTRQVPPD 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ + + L DA+ KK CC+
Sbjct: 185 RIVPIHSQNNITLSSTN---DAQNKKQ-CCT 211
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 153/213 (71%), Gaps = 9/213 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + I+GK +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ +F+++ RWL EL H+D N+V +LVGNK+D
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGNKTDQ 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL-- 189
+ R V T +GK A GL F+ETSAL+++NV AFQ ++T IY I+S K + +
Sbjct: 127 RHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLAEEGADV 186
Query: 190 -KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K+ D N ++ EG KKE + CC
Sbjct: 187 GKKFDPREGNNISLSQEGAKKEDKS------CC 213
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 149/194 (76%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y + ++ DY+FKVVLIGDSAVGK+ LLARF+R++F +SK+TIGVEFQT+ + I+ K
Sbjct: 4 LYGDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + +WL EL H+D N+V
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL + V T + + A+ + LFFMETSAL+S+NV AF T++TEIY ++ +K
Sbjct: 124 MLIGNKCDLATLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLIGKK 183
Query: 183 VMISQELKQKDSSS 196
+ + + SS
Sbjct: 184 TLTANDDTDPSGSS 197
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 148/214 (69%), Gaps = 9/214 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL+ R V T E K AE L F+ETSALDS+NV AAF ++TEIY +S K +
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV--- 181
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
D + G + + ++P K CC
Sbjct: 182 ---GTDRQGYGGGSGTI---IPSPASDPPKKQCC 209
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 156/223 (69%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y D DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + G
Sbjct: 1 MAGY-RADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALL+YD++R TF++ RWL EL H+D N+
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNK DL+ V T E KA AE + L+FMETSALD++NV AF V+T+I+ I+S
Sbjct: 120 VVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + +S+ GK + KE + K+ GCCS+
Sbjct: 180 KRSVDG----GGESADLPGKGETI--NVKEDGSVLKRMGCCSN 216
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 148/214 (69%), Gaps = 9/214 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL+ R V T E K AE L F+ETSALDS+NV AAF ++TEIY +S K +
Sbjct: 124 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV--- 180
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
D + G + + ++P K CC
Sbjct: 181 ---GTDRQGYGGGSGTI---IPSPASDPPKKQCC 208
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 147/210 (70%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS++Q++ + RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E KA A L F+ETSA+D+SNV +AFQ ++T+IY I+S K + E
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSKAL---ESSG 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+G T+ + + CC
Sbjct: 185 DSVGPTSGSTITVTPTADDGAKSNAGGKCC 214
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 149/211 (70%), Gaps = 17/211 (8%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
+VLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQER+
Sbjct: 9 MVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERY 68
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 69 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 128
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + E
Sbjct: 129 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGE-------- 180
Query: 197 FNGKTVVLEGEK------KEADAEPKKAGCC 221
G VL ++ K ADAE KK GCC
Sbjct: 181 --GSGPVLGNDRKVLEISKSADAEQKK-GCC 208
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 153/221 (69%), Gaps = 13/221 (5%)
Query: 12 DYLFK--------VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
DYLFK VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +
Sbjct: 9 DYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 68
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +
Sbjct: 69 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 128
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNKSDL+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 129 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK- 187
Query: 184 MISQELKQKDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
I+ +S G VV D + P K CC +
Sbjct: 188 QIADRAAHDESP---GNNVVDISVPPTTDGQKPNKLQCCQN 225
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 154/210 (73%), Gaps = 8/210 (3%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
Y+ VVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +K+QIWDTAG
Sbjct: 10 YVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAG 69
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QER+RA+TSAYYRGAVGALLVYD+S+ QT++++ RWL EL H+D N+V +LVGNKSDL+
Sbjct: 70 QERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLR 129
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 192
R V T E K A L F+ETSALD+SNV AFQ ++TEI+ I+S S+ L+
Sbjct: 130 HLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVS-----SKALESG 184
Query: 193 DSSSFN-GKTVVLEGEKKEADAEPKKAGCC 221
DSS+ G V+E K D+E KK GCC
Sbjct: 185 DSSANQLGDRKVVE-ITKTPDSE-KKPGCC 212
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 151/210 (71%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK VLIGDS VGKSNLL RF R+EF SKSTIGVEF T+ + ++ K++KAQIWDTA
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI+++ +FD++GRWL EL H+D N+V +LVGNK+DL
Sbjct: 68 GQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V+T E +A A L F+ETSA+D+SNV AFQTV+TEI+ I+S + S E
Sbjct: 128 LHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNR---SLEAGD 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
G+T+ + + + + + CC
Sbjct: 185 DGVHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 156/220 (70%), Gaps = 14/220 (6%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + I K VKAQI
Sbjct: 5 DEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYD +R TF+++ RWL EL H+D VV +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DL+ V+T E A AE + ++FMETSAL+S NV +AF V+T+IYN++S++ + +
Sbjct: 125 KTDLRHLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSKRALEKE 184
Query: 188 ELKQKDSSSFNGKTVVLEGEK----KEADAEPKKAGCCSS 223
NG V +GE ++ +E KK+ CCS+
Sbjct: 185 ----------NGSASVPKGETINIGRDDVSEVKKSTCCST 214
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 154/217 (70%), Gaps = 2/217 (0%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYL+K+VLIGDS VGKSNLL+RF RDEF SKSTIGVEF T+ + GK +KAQ
Sbjct: 4 KDEYYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDIS+R +F+++ RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDLK R VT E +E +G+ ME SAL+SSNV AF +++EIY + S + + +
Sbjct: 124 NKSDLKHLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAFHRILSEIYMLRSERQIAN 183
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAE--PKKAGCC 221
Q K + + V ++ + + D++ +K+ CC
Sbjct: 184 QHDLTKTTLPIGSQGVRVDPVRVDLDSKGLKRKSSCC 220
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 151/210 (71%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD ++ QTF + RWL EL H+D N+V +LVGNK D
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQ 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R + T +G AE + L F+ETSALD++NV AFQ ++TEIY I+S K + E
Sbjct: 127 KHVRAIKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL---ENGT 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + VV + ++ADA+ K CC
Sbjct: 184 SGQNPLGDRKVVEITKSQDADAKQK---CC 210
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 139/173 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF ++ F +SKSTIGVEF T+ +++ GK +KAQIWDTA
Sbjct: 16 DYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIWDTA 75
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD+++ TFD++ RWL EL H+D N+V +L+GNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIGNKMDL 135
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
K R V + + AE +GL F+ETSALD++NV AFQTV+ EIY I+S+K +
Sbjct: 136 KHLRSVAQEDAASFAEREGLSFIETSALDATNVDRAFQTVLGEIYRIISKKAL 188
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 155/214 (72%), Gaps = 6/214 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + GK +KAQIWDTA
Sbjct: 20 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTA 79
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGA+GA+LVYD+S+ TF++I RWL EL H+D N+ +LVGNK+DL
Sbjct: 80 GQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGNKTDL 139
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T +G++ AEA+GL ++ETSAL+++NV AFQ ++ +IY +S+K + +
Sbjct: 140 KHLRAVATDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKAVALDDGGA 199
Query: 192 KDSSSF--NGKTVVLEGEKKEADAEPKKAGCCSS 223
+ GKT+ + +D +K CCS+
Sbjct: 200 GGAGGGVKEGKTINVAA----SDTSGEKKQCCSA 229
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 149/206 (72%), Gaps = 6/206 (2%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQER+
Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 71
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 72 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRA 131
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E K+ A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q +
Sbjct: 132 VPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQATIGA 191
Query: 197 FNGKTVVLEGEKKEADAEPKKAG-CC 221
G + L K AD + K G CC
Sbjct: 192 --GTNISL---SKPADDDAAKGGKCC 212
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 148/209 (70%), Gaps = 5/209 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 8 DFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ +++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V E AE L F+ETSALDS+NV AF+ ++T IY ++S++ +K
Sbjct: 128 KHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQR-----SIKA 182
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGC 220
+S ++ G + E K GC
Sbjct: 183 GESDKTTPSDTIVVGPTDSSTTETSKGGC 211
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 157/219 (71%), Gaps = 2/219 (0%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S +D DYL+K+VLIGDS VGKSNLL+RF RDEF SKSTIGVEF T+ + GK +K
Sbjct: 2 SSKDEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDIS+R +F+++ RWL EL H+D N+V +L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLL 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS-RKV 183
VGNKSDL++ R VT E A +E +G+ ME SAL+SSNV AF +++EIY + S R++
Sbjct: 122 VGNKSDLRNLRTVTQEEACAFSEREGMACMEASALNSSNVDEAFHRILSEIYTLRSERQL 181
Query: 184 MISQELKQKDSSSFNGKTVVLEGEKKEADAE-PKKAGCC 221
+Q K + + V ++ + + +++ KK CC
Sbjct: 182 TANQHDLNKATLPLGTQGVRVDPIRIDLNSKGSKKRSCC 220
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 155/214 (72%), Gaps = 3/214 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDS VGKS LL RF R+EF+ SK+TIGVEF T+ + ++ K VKAQIWDTA
Sbjct: 14 DYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLVKAQIWDTA 73
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER++A+T+AYYRGA GALL YDI++R TF+ I +WL+ELH H+D N+V +LVGNKSDL
Sbjct: 74 GQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADKNIVVMLVGNKSDL 133
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
REV E + LA+ +G FF+ETSALDS+NV AF ++++IY +S+K + + ++
Sbjct: 134 SSIREVPIEEAEDLAKQKGFFFIETSALDSNNVEPAFLGLLSQIYVTMSKKHITADGRER 193
Query: 192 ---KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
K + F G +++ ++ E K+ CCS
Sbjct: 194 NWDKVNLEFEGTKLLVSSQEPECQKSKKRFSCCS 227
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/163 (68%), Positives = 134/163 (82%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTE 174
+ R V T E +A AE GL F+ETSALDS+NV AFQT++TE
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTE 171
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 138/171 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V T E + AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 129 RHLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 152/213 (71%), Gaps = 9/213 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + I+ K +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ +F+++ RWL EL H+D N+V +LVGNK+D
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGNKTDQ 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL-- 189
+ R V T +GK A GL F+ETSAL+++NV AFQ ++T IY I+S K + +
Sbjct: 127 RHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLAEEGADV 186
Query: 190 -KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K+ D N T+ EG K+E+ CC
Sbjct: 187 GKKFDPREGNNITLSQEGRKEESKT------CC 213
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 156/213 (73%), Gaps = 12/213 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 7 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD +++QTF + RWL EL H+D N+V +LVGNK D
Sbjct: 67 GQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVGNKIDE 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R+V T++ A+ L F+ETSALD++NV AFQ ++TEIY I+S K + +
Sbjct: 127 KHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL------E 180
Query: 192 KDSSSFN--GKTVVLEGEK-KEADAEPKKAGCC 221
SSS N G V+E K ++ADA+ K CC
Sbjct: 181 NGSSSQNPLGDRKVIEISKTQDADAKQK---CC 210
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 148/210 (70%), Gaps = 5/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYL K+VLIGDS VGK+NLLARF RD+F P SKSTIGVEF ++ M I GK +KAQIWDTA
Sbjct: 7 DYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGA+GALL+YDI+ TF+S+ +WL EL ++D ++ +LVGNK DL
Sbjct: 67 GQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKCDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R VT+A A+AQ L F+ETSA +++NV AFQT++ EI N L+++ + ++E
Sbjct: 127 SEQRAVTSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVNKLNKQNVAAEEKAN 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ G ++ E KK GCC
Sbjct: 187 VQETPRQGVSIT-----ATKSPEEKKKGCC 211
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 162/227 (71%), Gaps = 15/227 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+ F ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRADDEY-DYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ WL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T + K+ AE + L+FMETSA +++NV AF V+T+I++I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEK----KEADAEPKKAGCCSS 223
+K M + S S N V +G+K K+ A KK GCCS+
Sbjct: 180 KKAM------EAASESAN---VPSKGDKIDIGKDVSA-VKKGGCCSN 216
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 146/204 (71%), Gaps = 4/204 (1%)
Query: 18 VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFR 77
VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+R
Sbjct: 19 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 78
Query: 78 AVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREV 137
A+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R V
Sbjct: 79 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 138
Query: 138 TTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSF 197
T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K Q + +
Sbjct: 139 PTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK----QIRDPPEGDTI 194
Query: 198 NGKTVVLEGEKKEADAEPKKAGCC 221
+ V K +AE + CC
Sbjct: 195 RPQNVEQIEVKPTMNAEGVRKQCC 218
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 113/181 (62%), Positives = 140/181 (77%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLLARF R+EF SKSTIGVEF T+ + +N K +KAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI+++ T+ ++ RWL+EL H+D N+V +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL+ R V E A AEA L F+ETSALDS+NV AF+ ++TEI+ +S + M S
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIHRKVSARQMDSM 184
Query: 188 E 188
+
Sbjct: 185 D 185
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 148/207 (71%), Gaps = 5/207 (2%)
Query: 16 KVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQER 75
KVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 76 FRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAR 135
+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 136 EVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSS 195
V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+ +S
Sbjct: 121 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAHDESP 179
Query: 196 SFNGKTVVLEGEKKEADAE-PKKAGCC 221
G VV D + P K CC
Sbjct: 180 ---GNNVVDISVPPTTDGQKPNKLQCC 203
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 161/224 (71%), Gaps = 8/224 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA EE+ DYLFKVVLIGDS VGKSNL +RF R+EF SKSTIGVEF T+ +++ G
Sbjct: 1 MARRGEEEY--DYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+ VKAQIWDTAGQER+RA+TSAYYRGA+GALLVYD+++ +F+++ RWL EL H+D N+
Sbjct: 59 RMVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNK+DLK R V T + ++ AE +GL F+ETSAL+++NV AFQT++ +IY I+S
Sbjct: 119 VIMLIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIIS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKA-GCCSS 223
+K + S + G T+ +EG +P + CC++
Sbjct: 179 KKSLSSSSTDPSAPNIKQGNTITIEG-----GLQPNTSKSCCTT 217
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 157/214 (73%), Gaps = 8/214 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K VKAQ+WDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQVWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD+SR TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIVVMLVGNKADL 130
Query: 132 KDAREVTTAEGKA-LAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
+ R V+T + L + FFMETSAL+S NV AF V+T+IY ++S+K + E+
Sbjct: 131 RHLRAVSTEDSSGFLLNERTHFFMETSALESLNVENAFTEVLTQIYRVVSKKAL---EIG 187
Query: 191 QKDSSSFNGKTVVLEGEKKEADAEP-KKAGCCSS 223
++ G+T+ + G + D P KK+GCCSS
Sbjct: 188 DDPTALPKGQTINV-GSRD--DVSPVKKSGCCSS 218
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 117/223 (52%), Positives = 158/223 (70%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M Y ED DYLFKVVL GDS VGKSNLL+RF R++F +S+STIGVEF T+ + ++
Sbjct: 1 MGTYKAEDDY-DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANT 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL R ++T E K AE + FFMETSAL++ NV AF V+T+IY ++S
Sbjct: 120 VIMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + + +++ ++ G + + A KK+GCC++
Sbjct: 180 KKAL---DAGDDPTTALPKGQMINVGSRDDVSA-VKKSGCCAT 218
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 153/214 (71%), Gaps = 7/214 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVILLVGNKSDL 128
Query: 132 KDAREVTT-AEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
+ R V E +A AE + L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVCPLTEARAFAE-RHLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAA 186
Query: 191 QKDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 187 HDESP---GNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 153/222 (68%), Gaps = 16/222 (7%)
Query: 12 DYLFK------------VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDIN 59
D+LFK VVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + I+
Sbjct: 7 DFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQID 66
Query: 60 GKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMN 119
GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI + +F+++ RWL EL H+D N
Sbjct: 67 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRDHADSN 126
Query: 120 VVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNIL 179
+V +LVGNK+D + R V+T +GKA A GL F+ETSAL+++NV AFQ ++T IY I+
Sbjct: 127 IVIMLVGNKTDKRHLRAVSTEDGKAFAAEHGLSFIETSALEATNVDLAFQEILTSIYQIV 186
Query: 180 SRKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S K + + K G + L EK ++ ++ GCC
Sbjct: 187 SSKSLAEEGDVSKKFDPSQGNNISLSQEK----SQEEQKGCC 224
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 146/196 (74%), Gaps = 3/196 (1%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VKAQ
Sbjct: 4 KDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTVKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T+++ WL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL+ R V T E K+ AE GL F+E SALDS+NV AAF ++TEIY I+S++ +
Sbjct: 124 NKSDLRHLRAVPTDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILTEIYRIVSQRQLAG 183
Query: 187 QELKQKDSSSFNGKTV 202
Q +S +G T+
Sbjct: 184 ---GQPESEFSHGTTI 196
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 147/205 (71%), Gaps = 6/205 (2%)
Query: 18 VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFR 77
VLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQER+R
Sbjct: 5 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYR 64
Query: 78 AVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREV 137
A+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL+ R V
Sbjct: 65 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAV 124
Query: 138 TTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSF 197
T E KA A L F+ETSALD+SNV AFQ ++TEIY I+S K + + Q +
Sbjct: 125 PTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGDSAQATIGA- 183
Query: 198 NGKTVVLEGEKKEADAEPKKAG-CC 221
G + L K AD + K G CC
Sbjct: 184 -GTNISLS---KPADDDASKGGKCC 204
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 137/171 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYL+K+VLIGDS VGKSNLL+RF R+EF +KSTIGVEF T+ + GK +KAQ+WDTA
Sbjct: 10 DYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++ T+ S+ RWL EL ++D N+ +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ REV+T E K +E L F+ETSALDSSNV AFQ ++T+IY+++SR
Sbjct: 130 RHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHLMSRP 180
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 149/205 (72%), Gaps = 5/205 (2%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
+VLIGDS VGKSNLL+RF R+EF ++KSTIGVEF T+ + ++ K +KAQIWDTAGQER+
Sbjct: 22 MVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 81
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 82 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 141
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q +
Sbjct: 142 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQ---AG 198
Query: 197 FNGKTVVLEGEKKEADAEPKKAGCC 221
+ V++ + D E K+ GCC
Sbjct: 199 LGDRRPVVDINPSQ-DPETKQ-GCC 221
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 157/216 (72%), Gaps = 6/216 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RFA++EF +SKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 30 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTA 89
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQ+FD + RW+ EL H+D ++V +LVGNK+DL
Sbjct: 90 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLVGNKADL 149
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D R V T + AE QGLFF ETSAL NV +AF ++ EI ++S+K + K+
Sbjct: 150 VDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKALECGYGKE 209
Query: 192 KDS----SSFNGKTV-VLEGEKKEADAEPKKAGCCS 222
+S NG V ++ G + E +E KK CS
Sbjct: 210 NGDNNVVASLNGTKVDIILGPELEI-SEMKKLSSCS 244
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 147/197 (74%), Gaps = 3/197 (1%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK VLIGDSAVGKSNLL+RF+RDEF +SK TIGVEF + + + K +KAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TFD++ +WL EL + + +V +L GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVVLAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K DL REV EGK LAE +GL FMETSAL++ NV AF ++T+I+ I S+K S
Sbjct: 126 KCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQK---SL 182
Query: 188 ELKQKDSSSFNGKTVVL 204
E++ KD+++ KTV L
Sbjct: 183 EVRLKDANNITSKTVAL 199
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 152/219 (69%), Gaps = 4/219 (1%)
Query: 5 SEEDRAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
S ED + DY LFK+VL+G+S+VGKSNLL+RF RDEF SK+TIGVEF T+ ++++GK
Sbjct: 4 SAEDYSYDYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVDGKR 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RAVT+AYYRGAVGALLVYDIS +++ RWL+EL H+D N+V
Sbjct: 64 IKAQIWDTAGQERYRAVTAAYYRGAVGALLVYDISNSSSYEGASRWLSELKDHADANIVV 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
LVGNKSDL R V T E K+ A +GL F E SAL+S NV AFQ ++ IY+++S+
Sbjct: 124 ELVGNKSDLNHLRAVPTDEAKSFATEKGLLFTEASALNSENVELAFQQLIKAIYDMVSKH 183
Query: 183 VMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + G+T+ L K D++ KK CC
Sbjct: 184 QFDMNDYGNDNKPITGGQTITLTPTPK--DSKIKKDSCC 220
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 157/215 (73%), Gaps = 5/215 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RFA++EF NSKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 22 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIWDTA 81
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQ+FD + RW++EL H+D ++V +L+GNK DL
Sbjct: 82 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNKGDL 141
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK- 190
D R V + AE QGLFF ETSAL NV ++F ++ EI+ ++S++ + K
Sbjct: 142 VDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDNGKA 201
Query: 191 --QKDSSSFNGKTV-VLEGEKKEADAEPKKAGCCS 222
+ ++ G + V+ G + E AE KK+ CS
Sbjct: 202 NADNNVATLKGSKIDVISGAELEI-AEMKKSSSCS 235
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 144/184 (78%), Gaps = 1/184 (0%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEV 63
SE++ DYLFK+VL+GDS VGKSNLL RF R+EF+ +SKSTIGVEF T+ + + +GK V
Sbjct: 3 SEKEEEHDYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGKVV 62
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER++A+T+AYYRGA GALLVYDI++R + ++I RWL EL H D +V +
Sbjct: 63 KAQIWDTAGQERYKAITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMVVM 122
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNK DL+ R+V +GK LAE +GL F+ETSALDS+NV AF ++ EIY ++ +K
Sbjct: 123 LVGNKCDLRHLRQVEIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLIREIYRLMKKKA 182
Query: 184 MISQ 187
++++
Sbjct: 183 LVNE 186
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 148/208 (71%), Gaps = 5/208 (2%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+ +S
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAHDESP- 178
Query: 197 FNGKTVVLEGEKKEADAE-PKKAGCCSS 223
G VV D + P K CC +
Sbjct: 179 --GNNVVDISVPPTTDGQKPNKLQCCQN 204
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 146/195 (74%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK VLIGDSAVGKSNLL+RF+RDEF +SK TIGV+F + + + K +KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+TS+YYRGA+GALL+YDI+RR TF +I +WL+EL S V +LVGN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL +REV EGK LAE++GL+F+ETSAL++ NV AF +++ I+ +L++K+++
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDN 186
Query: 188 ELKQKDSSSFNGKTV 202
L ++ NG V
Sbjct: 187 RLNGDGNNESNGAVV 201
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 150/213 (70%), Gaps = 6/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYL+K+VLIGDS VGKSNLL+RF R+EF +KSTIGVEF T+ + GK +KAQIWDTA
Sbjct: 12 DYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKAQIWDTA 71
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMN--VVTILVGNKS 129
GQER+RA+TSAYYRGAVGALLVYDI+++ T+ S+ RWL EL ++D N + +LVGNKS
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIMLVGNKS 131
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL+ REV+T E K AE L F+ETSALDSSNV AFQT++T+I + +SR I
Sbjct: 132 DLRHLREVSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILTQICHSMSRPTPIGAPS 191
Query: 190 KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
D+S G V + + K +P + C+
Sbjct: 192 GHDDNSPSIGTPVDISSDTK----KPNQGNNCA 220
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 157/215 (73%), Gaps = 5/215 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RFA++EF +SKSTIGVEFQT+ + IN K +KAQIWDTA
Sbjct: 30 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINAKVIKAQIWDTA 89
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQ+FD + RW+ EL H+D ++V +LVGNK+DL
Sbjct: 90 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLVGNKADL 149
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM---ISQE 188
D R V T + AE QGLFF ETSAL NV +AF ++ EI ++S+K + + +E
Sbjct: 150 VDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKALECGLGKE 209
Query: 189 LKQKDSSSFNGKTV-VLEGEKKEADAEPKKAGCCS 222
+ +S G V ++ G + E +E KK CS
Sbjct: 210 NGDTNVASLKGTKVDIILGPELEI-SEMKKLSSCS 243
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/162 (66%), Positives = 132/162 (81%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVT 173
+ R V T E K AE GL F+ETSALDS+NV AFQ ++T
Sbjct: 129 RHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 148/212 (69%), Gaps = 6/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YLFK+VLIGDS+VGK+NLL+RF RDEF P+S++TIGVEF T+ ++INGK +KAQIWDTA
Sbjct: 13 EYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRIKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGAL+VYDIS +++S+ RWL E+ H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIALVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV--MISQEL 189
+ R V T E + A L F E SAL++ NV F ++ IY+++S++ M +
Sbjct: 133 EHLRAVPTEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKSIYDMVSKRKFDMDENGV 192
Query: 190 KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
KD N KT+ L K+ K + CC
Sbjct: 193 ANKD---LNSKTITLTPAPKDKKVS-KNSNCC 220
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 146/195 (74%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK VLIGDSAVGKSNLL+RF+RDEF +SK TIGV+F + + + K +KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+TS+YYRGA+GALL+YDI+RR TF +I +WL+EL S V +LVGN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL +REV EGK LAE++GL+F+ETSAL++ NV AF +++ I+ +L++K+++
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDN 186
Query: 188 ELKQKDSSSFNGKTV 202
L ++ NG V
Sbjct: 187 RLNGDGNNESNGAVV 201
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 150/208 (72%), Gaps = 6/208 (2%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
L +VLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +K+QIWDTAGQ
Sbjct: 26 LRALVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQ 85
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
ER+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL+
Sbjct: 86 ERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRH 145
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKD 193
R V T E K A L F+ETSALD+SNV AFQ ++TEI+ I+S K + S + Q
Sbjct: 146 LRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSGDSAQNP 205
Query: 194 SSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S + K V + K D E K+ GCC
Sbjct: 206 LS--DRKVVEI---TKTQDPESKQ-GCC 227
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 156/215 (72%), Gaps = 5/215 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RFA++EF NSKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 22 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIWDTA 81
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQ+FD + RW++EL H+D ++V +L+GNK DL
Sbjct: 82 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNKGDL 141
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK- 190
D R V + AE QGLFF ETSAL NV ++F ++ EI+ ++S++ + K
Sbjct: 142 VDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDNGKA 201
Query: 191 --QKDSSSFNGKTV-VLEGEKKEADAEPKKAGCCS 222
+ ++ G + V+ G + E AE KK CS
Sbjct: 202 NADNNVATLKGSKIDVISGAELEI-AEMKKLSSCS 235
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 147/204 (72%), Gaps = 6/204 (2%)
Query: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRA 78
+IGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQER+RA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 79 VTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVT 138
+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL+ R V
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 120
Query: 139 TAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFN 198
T E K+ A L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q +
Sbjct: 121 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQATIGA-- 178
Query: 199 GKTVVLEGEKKEADAEPKKAG-CC 221
G + L K AD + K G CC
Sbjct: 179 GTNISLS---KPADDDAAKGGKCC 199
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 156/219 (71%), Gaps = 11/219 (5%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
E DYLFK V++GDS VGK+N+L+RF R+EF +SKSTIGV+F T+ ++++ K VKAQ
Sbjct: 3 ESITHDYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQ 62
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
+WDTAGQ+R+RA+T+AYYRGAVGALLVYDI+RR T+D++ RWL EL +D N V +LVG
Sbjct: 63 LWDTAGQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVG 122
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDLK R V+T E A + GL F+ETSALDSSNV AF TVV +I+ I+S +
Sbjct: 123 NKSDLKHIRAVSTEEAAAFSAEHGLSFLETSALDSSNVDEAFNTVVNDIFKIVS-----A 177
Query: 187 QELKQKD---SSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
Q+L++ + S+ G + ++ + + K GCCS
Sbjct: 178 QQLERSENEVSAPGAGAPIKID---NSTETQTTKGGCCS 213
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 139/173 (80%), Gaps = 2/173 (1%)
Query: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRA 78
LIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 79 VTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVT 138
+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R V
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 123
Query: 139 TAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK--VMISQEL 189
T E KA AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K V++ +E+
Sbjct: 124 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIVILQKEI 176
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 135/178 (75%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + K +KAQ
Sbjct: 58 KDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIKAQ 117
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ TF++ RWL EL H++ N+V +LVG
Sbjct: 118 IWDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVMLVG 177
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
NK DL+ R V+ E K AE L F+ETSALDSS V AFQ ++TEIY ++++K M
Sbjct: 178 NKCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQM 235
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 146/195 (74%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK VLIGDSAVGKSNLL+RF+RDEF +SK TIGV+F + + + K +KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+TS+YYRGA+GALL+YDI+RR TF +I +WL+EL S V +LVGN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL +REV EGK LAE++GL+F+ETSAL++ NV AF +++ I+ +L++K+++
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDN 186
Query: 188 ELKQKDSSSFNGKTV 202
L ++ NG V
Sbjct: 187 RLNGDGNNESNGAVV 201
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 152/212 (71%), Gaps = 4/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++ +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ ++++ + +WL EL H+D N+V +L+GNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIMLIGNKCDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T + + A +GL F ETSAL+S+NV AF ++TE++ I+S+K SQ +
Sbjct: 129 KHLRCVQTEDARLFAANEGLSFTETSALESTNVELAFHQILTEVFQIVSKK---SQSNES 185
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S +G + + E + K+ CCS+
Sbjct: 186 NDQSQRHGSSTI-EVNAINDGVKKSKSQCCSA 216
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/165 (65%), Positives = 134/165 (81%)
Query: 18 VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFR 77
VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++GK +KAQIWDTAGQER+R
Sbjct: 89 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR 148
Query: 78 AVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREV 137
A+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R V
Sbjct: 149 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSV 208
Query: 138 TTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
T E K AE GL F+ETSALDS+NV AFQ ++TEIY I+S+K
Sbjct: 209 PTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK 253
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDIN 59
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVS 56
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 146/210 (69%), Gaps = 1/210 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI++ ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E + A L F E SAL S NV +F ++ IY ++S+ + + E
Sbjct: 133 DHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQGG 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
++S NG T+ L KE + + CC
Sbjct: 193 LKAAS-NGPTISLTPAPKEKKSSKNNSNCC 221
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 154/238 (64%), Gaps = 26/238 (10%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y R +LFKVVLIGDS GKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +
Sbjct: 6 YDVSPRPLTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTI 65
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D N+V +
Sbjct: 66 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIM 125
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVT---------- 173
LVGNKSDL+ R V T E K A L F+ETSALD+SNV AFQ ++T
Sbjct: 126 LVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTGIAPVGISKR 185
Query: 174 ----------EIYNILSRKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
EIY I+S K + + +S + +++ EK + D E K GCC
Sbjct: 186 RSLTAILFFVEIYRIVSSKALEG----ESGGASVGERRQIIDIEKTQ-DTE-NKGGCC 237
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 143/179 (79%), Gaps = 2/179 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA EE+ DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ +++ G
Sbjct: 1 MARRGEEEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+ VKAQIWDTAGQER+RA+TSAYYRGA+GALLVYD+++ +F+++ RWL EL H+D N+
Sbjct: 59 RMVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNIL 179
V +L+GNK+DLK R V T + ++ AE +GL F+ETSAL+++NV AFQT++ +IY I+
Sbjct: 119 VIMLIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRII 177
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 146/205 (71%), Gaps = 5/205 (2%)
Query: 18 VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFR 77
VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+R
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 60
Query: 78 AVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREV 137
A+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R V
Sbjct: 61 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 120
Query: 138 TTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSF 197
T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+ +S
Sbjct: 121 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAHDESP-- 177
Query: 198 NGKTVVLEGEKKEADAE-PKKAGCC 221
G VV D + P K CC
Sbjct: 178 -GNNVVDISVPPTTDGQKPSKLQCC 201
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 145/210 (69%), Gaps = 1/210 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI++ ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E + A L F E SAL S NV +F ++ IY ++S+ + + E
Sbjct: 133 DHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQGG 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ S NG T+ L KE + + CC
Sbjct: 193 LKAPS-NGPTISLTPAPKEKKSSKNNSNCC 221
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 147/205 (71%), Gaps = 5/205 (2%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VKAQIWDTAGQER+
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERY 89
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDI++ T+++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 90 RAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRA 149
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E ++ AE GL F+ETSALDS+NV AF +++EIY I+S++ + Q + SS
Sbjct: 150 VPTDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQITGQAESEFGPSS 209
Query: 197 FNGKTVVLEGEKKEADAEPKKAGCC 221
VL ++ E ++A CC
Sbjct: 210 TIEPIQVLPTQQ-----EGRQAPCC 229
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 159/224 (70%), Gaps = 6/224 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQK-MDIN 59
M Y ED DYLFKVVL GDS VGKSNLL+RF R++F +S+STIGVEF T++ + ++
Sbjct: 1 MGTYKAEDDY-DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVD 59
Query: 60 GKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMN 119
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N
Sbjct: 60 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN 119
Query: 120 VVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNIL 179
V +LVGNK+DL R ++T E K AE + FFMETSAL++ NV AF V+T+IY ++
Sbjct: 120 TVIMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVV 179
Query: 180 SRKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S+K + + +++ ++ G + + A KK+GCC++
Sbjct: 180 SKKAL---DAGDDPTTALPKGQMINVGSRDDVSA-VKKSGCCAT 219
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 151/212 (71%), Gaps = 12/212 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + K +KAQIWDTA
Sbjct: 8 DFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T E + AE L F+ETSAL++ NV AF T++T+IY+I+S+K + + E
Sbjct: 128 KHLRAVPTEEAQKFAEENDLSFIETSALEAENVDDAFTTILTKIYHIVSQKQVAAPE--- 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGC-CS 222
TV+ K +++ K GC CS
Sbjct: 185 ------KPDTVI--DPTKPQNSKEKSGGCGCS 208
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 146/210 (69%), Gaps = 1/210 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGA+GAL+VYDI++ ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E + A L F E SAL S NV +F ++ IY ++S+ + + E
Sbjct: 133 DHLRAVPTDEARNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQGG 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+++ NG T+ L KE + GCC
Sbjct: 193 LKAAT-NGPTISLTPAPKERNRNKNNGGCC 221
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 133/167 (79%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVT 173
NKSDL+ R V T E KA AE L F+ETSALDS+NV AFQ ++T
Sbjct: 124 NKSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILT 170
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 144/195 (73%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK VLIGDSAVGKSNLL+RF+RDEF +SK TIGV+F + + + K +KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+TS+YYRGA+GALL+YDI+RR TF +IG+WL+EL S V +LVGN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETVVVLVGN 126
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL +REV EGK LAE++GL+F+ETSAL++ NV AF +++ I+ +L++K +
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKTAVDN 186
Query: 188 ELKQKDSSSFNGKTV 202
++ NG +
Sbjct: 187 RPNGDGNNESNGAVI 201
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 153/210 (72%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+L+K+VL+G+S VGKSNLL RF R+EF P+ +STIGVEF T+ + + K ++AQIWDTA
Sbjct: 10 DFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKNIRAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGA+GAL+VYDI+++ +F+S+ RWLNELH ++D V+ +++GNKSDL
Sbjct: 70 GQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQMIIGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
REVTT EGK LAE FF ETSALD +NV AF T++ +IY+ S KV++ +
Sbjct: 130 NQTREVTTEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLLKKIYD-ESAKVVVDE---V 185
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K + TVVL E E A K+ CC
Sbjct: 186 KTEAKPTADTVVLTHE--EPKATEKQQKCC 213
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 147/210 (70%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVV+IGDS VGK+N+L RF RDEF +SKSTIGVEF T+ ++I+ K +KAQIWDTA
Sbjct: 6 DFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALL+YD++ Q++ +I RWL EL H+D N+V +LVGNK DL
Sbjct: 66 GQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVGNKCDL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V T E K A L F+ETSALD ++V AF+ ++TEIY+ +S + L+
Sbjct: 126 KHLRAVPTEEAKQFASQNKLLFIETSALDGTDVALAFRNILTEIYHRVSAAENVHANLED 185
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
G T+ L + D++ K + CC
Sbjct: 186 SRKPQ-QGTTISL--TPQPGDSDKKSSSCC 212
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 145/197 (73%), Gaps = 3/197 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RF ++EF +SKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 18 DYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIWDTA 77
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQTFD + RW+ EL +H+D ++V +L+GNK DL
Sbjct: 78 GQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIGNKGDL 137
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D R V T + AE QGLFF ETSA NV +AF ++ EI ++S++ S E
Sbjct: 138 VDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKR---SLECNN 194
Query: 192 KDSSSFNGKTVVLEGEK 208
+ N L+GEK
Sbjct: 195 GIKGNGNHDVAALKGEK 211
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 150/212 (70%), Gaps = 8/212 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF RD F SKSTIGVEF T+ ++I+GK +KAQIWDTA
Sbjct: 14 DYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWDTA 73
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYD+ + Q+F ++ WLNEL H++ N+V +LVGNK DL
Sbjct: 74 GQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKCDL 133
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ-ELK 190
+ R V T + + A+ QGL F+ETSALDS+NV AF ++ +IYNI+S ++ ++K
Sbjct: 134 RHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYNIVSSHPPVNNVDMK 193
Query: 191 QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S N + +V AD CC+
Sbjct: 194 M---SLHNNQPIV----SPNADNASGGRRCCN 218
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 152/214 (71%), Gaps = 10/214 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D A +++FKVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + +NG +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDIS+ T++S RWL EL+ H+D ++V +LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V T + K AE GL F ETSAL+S NV AAF TV+TEI+ K + S+
Sbjct: 124 KSDLAAVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIH-----KKVNSK 178
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
E+ + S+ V L K A+ + +K CC
Sbjct: 179 EVTRGSISA-----VTLSQPKTPAETQEEKKTCC 207
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 139/173 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RFA++EF +SKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 22 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTA 81
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDIS+RQ+FD + RW++EL H+D ++V +L+GNK DL
Sbjct: 82 GQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLIGNKGDL 141
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
D R V + AE QGLFF ETSAL NV +AF ++ EI+ ++S++ +
Sbjct: 142 VDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESAFFKLLEEIHRVISKRSL 194
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 145/206 (70%), Gaps = 6/206 (2%)
Query: 16 KVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQER 75
K L DS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQER
Sbjct: 7 KPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQER 66
Query: 76 FRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAR 135
+RA+TSAYYRGAVGALLVYDIS+ QT+D++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 67 YRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLR 126
Query: 136 EVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSS 195
V T E K A L F+ETSALD+SNV AFQ ++TEIY I+S S+ L DS
Sbjct: 127 AVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVS-----SKALDSGDSQ 181
Query: 196 SFNGKTVVLEGEKKEADAEPKKAGCC 221
+ G + + D+E K+ GCC
Sbjct: 182 APLGDRRPVIDVSQTPDSESKQ-GCC 206
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 147/210 (70%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI++ ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A L F E SAL S NV +F ++ IY ++S+ + +
Sbjct: 133 DHLRAVPTDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNADSN 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
K S+S G T+ L KE +++ + CC
Sbjct: 193 KQSTS--GPTISLTPAPKEKNSK-SNSNCC 219
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 150/214 (70%), Gaps = 4/214 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ LL+RF ++EF +SKSTIGVEFQT+ + I GK VKAQIWDTA
Sbjct: 18 DYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTIKGKVVKAQIWDTA 77
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++R TFD + RW+ EL H+D ++V L+GNK+DL
Sbjct: 78 GQERYRAVTSAYYRGALGAMLVYDITKRATFDHVARWVEELRAHADNSIVITLIGNKADL 137
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D R V T + AE QGLFF ETSAL NV AF ++ EIY ++S+K + K
Sbjct: 138 VDQRAVPTEDAVEFAEDQGLFFSETSALSGDNVDRAFFRLLEEIYGVISKKSLECGGHKT 197
Query: 192 K--DSSSFNGKTV-VLEGEKKEADAEPKKAGCCS 222
DS G + V+ G E +E KK CS
Sbjct: 198 NGADSVMLRGSKIDVISGSDLEI-SEMKKLSACS 230
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 147/210 (70%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF +S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A L F E SAL+S NV +F ++ IY ++S+ + + +
Sbjct: 133 DHLRAVPTDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKNIYEMISKHQLETDDQPS 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
SS G T+ L +E ++ A CC
Sbjct: 193 AKPSS--GATISLTPVPQEKKSK-NNANCC 219
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 146/210 (69%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI++ ++++S+ RWL EL H+D N++ LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A L F E SAL S NV +F ++ IY ++S+ + + + KQ
Sbjct: 133 DHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNDSKQ 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+++ G T+ L +E GCC
Sbjct: 193 TNTAG--GPTISLTPAPQEK-KNKNNGGCC 219
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 151/213 (70%), Gaps = 7/213 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI--NGKEVKAQIWD 69
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ +++ GK VKAQIWD
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVCLEGKTVKAQIWD 68
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQER+RA+TSAYYRGAVGALLVYDI++ +++D++ +WL EL H+D N+V LVGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHADSNIVITLVGNKT 128
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DLK R V + +GL F+ETSA +S+NV AF+ +T++Y+I+S+K S E+
Sbjct: 129 DLKHLRSVQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLTDVYHIISKKSCSSAEV 188
Query: 190 KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
K NG ++E + ++ + CC+
Sbjct: 189 DDK-----NGGAGIIEVKAISESSKKNPSKCCN 216
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 145/197 (73%), Gaps = 3/197 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RF ++EF +SKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 7 DYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQTFD + RW+ EL +H+D ++V +L+GNK DL
Sbjct: 67 GQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIGNKGDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D R V T + AE QGLFF ETSA NV +AF ++ EI ++S++ S E
Sbjct: 127 VDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKR---SLECNN 183
Query: 192 KDSSSFNGKTVVLEGEK 208
+ N L+GEK
Sbjct: 184 GIKGNGNHDVAALKGEK 200
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 151/214 (70%), Gaps = 13/214 (6%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D A +++FKVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + +N +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDI++ T++S+ RWL EL+ H+D ++V +L+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL+ R V T E K AE +GL F+ETSALDS+NV AAF TV+ EI+ +S K ++
Sbjct: 124 KSDLESERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEVVRG 183
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ V L K E D E K CC
Sbjct: 184 PM----------SAVTLNSPKAE-DTEKKP--CC 204
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 135/169 (79%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
+ K VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQ
Sbjct: 11 ICKFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
ER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRH 130
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 131 LRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 137/173 (79%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RF ++EF +SKSTIGVEFQT+ + I K +KAQIWDTA
Sbjct: 27 DYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIWDTA 86
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQTFD + RW+ EL H+D ++V +LVGNK+DL
Sbjct: 87 GQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNKADL 146
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
D R V + + +E QGLFF ETSAL+ NV AF V+ EIY ++S+K +
Sbjct: 147 VDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKAL 199
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 134/166 (80%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+
Sbjct: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 73
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K
Sbjct: 134 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 137/173 (79%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RF ++EF +SKSTIGVEFQT+ + I K +KAQIWDTA
Sbjct: 23 DYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIWDTA 82
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQTFD + RW+ EL H+D ++V +LVGNK+DL
Sbjct: 83 GQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNKADL 142
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
D R V + + +E QGLFF ETSAL+ NV AF V+ EIY ++S+K +
Sbjct: 143 VDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKAL 195
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 133/170 (78%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 137 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 196
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 197 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 256
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+ R V T E +A AE L F+ETSALDS+NV AF+ ++T + R
Sbjct: 257 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTGRHRAWPR 306
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 149/212 (70%), Gaps = 18/212 (8%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK---------- 57
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
+RAVTSAYYRGA+GALLVYDI++RQ+FD I RWL EL H+D N+V +LVGNKSDL
Sbjct: 58 ----YRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 113
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+D R V+T + K AE + LFF+ETSAL ++NV AFQTV++EI+ I S+K M +
Sbjct: 114 EDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAADPKAN 173
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S GK VV+ G +E K+ CCSS
Sbjct: 174 GAAPSLAGKKVVVPGPAQEI----PKSKCCSS 201
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/225 (52%), Positives = 155/225 (68%), Gaps = 15/225 (6%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
F +E+D DYLFKV LIGDS VGKSNL RF R+EF SKSTIGVEF T+ ++++GK
Sbjct: 3 GFRAEDDY--DYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+L+GNKSDL+ V+T +G LAE + L FMETSAL+++NV AF V+++ +L+R
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGNLLAERESLSFMETSALEATNVDNAFAEVLSKSTALLAR 180
Query: 182 K----VMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ V+I Q+ S + V + KK GCCS
Sbjct: 181 RLWKLVIIDQDAVPSKSEKIDVSKDV---------SAVKKVGCCS 216
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 151/211 (71%), Gaps = 4/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK VLIGDSAVGKSNLL+RF+RDEF +SK TIGVEF + + + K +KAQIWDTA
Sbjct: 11 DYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFRA+TS+YYRGA+GALLVYDI+RR TF+++ +WL EL ++V +LVGNKSDL
Sbjct: 71 GQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVLVGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+REV EGK LAE +GL FMETSAL++ NV AF ++T+I+ + S+K + +L +
Sbjct: 131 GHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQK-NLEAKLNE 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
GK ++ + A K++ CCS
Sbjct: 190 PVKPLIIGKEIIHVDHEVSA---TKQSSCCS 217
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 157/217 (72%), Gaps = 10/217 (4%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 4 AEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDAVVK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGAL+V+DI++ QT+D + RWL EL+ H++ N+V +L
Sbjct: 62 AQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIVVML 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK+DL AREV E K A+ GL F+ETSALDS+NV AF+T++ EI++ +
Sbjct: 122 VGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKV----- 176
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
Q+ KQ++S S N ++ E + A A +K CC
Sbjct: 177 --QQQKQRNSQS-NAVSLANESPESAAAARMEKRQCC 210
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/158 (67%), Positives = 130/158 (82%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 67 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 126
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTE 174
V T E +A AE GL F+ETSALDS+NV AAFQT++TE
Sbjct: 127 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 164
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 145/210 (69%), Gaps = 2/210 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A L F E SAL S NV +F ++ IY ++S+ + + E
Sbjct: 133 DHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEGSN 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ S G T+ L +E ++ + CC
Sbjct: 193 GNKPS-GGPTISLTPAPQEKKSK-NNSNCC 220
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 143/210 (68%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI++ ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A+ L F+E SAL S NV +F ++ IY ++S+ + + E
Sbjct: 133 DHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQGG 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + G + ++ GCC
Sbjct: 193 VNKPTTAGGPTISLTPAPQSKKNKNNGGCC 222
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 153/219 (69%), Gaps = 7/219 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK VLIGDSAVGKSNLL+RF+RDEF +SK TIGVEF + + + K +KAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TFD++ +WL+EL ++V +LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSD+ REV +GK LAE + L+FMETSAL++ NV AF ++T I+ I S+K S
Sbjct: 126 KSDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQK---SL 182
Query: 188 ELKQKDSSSFNGKTVVLEGE----KKEADAEPKKAGCCS 222
E K+ +++ K + + E E A + + CCS
Sbjct: 183 EAKKNETTISTIKALPVGKEVINIDDEVSATKQASYCCS 221
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 145/210 (69%), Gaps = 2/210 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADANIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K+ A L F E SAL S NV +F ++ IY ++S+ + + +
Sbjct: 133 DHLRAVPTEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDTVG 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S G T+ L +E + K + CC
Sbjct: 193 SSKPS-GGPTISLTPAPQEKRS-GKNSNCC 220
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 150/212 (70%), Gaps = 8/212 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF RD F SKSTIGVEF T+ ++I+GK +KAQIWDTA
Sbjct: 14 DYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWDTA 73
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYD+ + Q+F ++ WLNEL H++ N+V +LVGNK DL
Sbjct: 74 GQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKCDL 133
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ-ELK 190
+ R V T + + A+ QGL F+ETSALDS+NV AF ++ +IY+I+S ++ ++K
Sbjct: 134 RHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVNNIDMK 193
Query: 191 QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S N + +V AD CC+
Sbjct: 194 M---SLHNNQPIV----SPNADNASGGRRCCN 218
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 153/212 (72%), Gaps = 7/212 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVL+GDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I K +KAQIWDTA
Sbjct: 9 DYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++ + TF ++ +WL+EL H+D N+V +LVGNK DL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIMLVGNKCDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R + + + A+ + L F+ETSALD++NV AF ++ +YN++S+ +Q +
Sbjct: 129 AQLRVIQAVKAQQFADTEDLIFIETSALDATNVETAFINALSNVYNVVSK----NQAVNA 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++S+ +++++ + D K+ CCS+
Sbjct: 185 EETSNKQNRSILISAAE---DGFRPKSKCCST 213
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 154/220 (70%), Gaps = 9/220 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV++GDSAVGK+ LL RF +DEF+ +SKSTIGVEFQT+ + ++ K VKAQIWDTA
Sbjct: 20 DYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTA 79
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA++VYDI+RR+TF+++ RW+ EL H+D + V L+GNK+D+
Sbjct: 80 GQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKADM 139
Query: 132 KDA-REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM-ISQEL 189
REV E AE QGLFF E SAL NV AF T++ EI+ ++SR+ + + +
Sbjct: 140 PAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDEAR 199
Query: 190 KQKDSSSFNGKTVVLEGEK------KEADAEPKKAGC-CS 222
+ +D + G+ + L+G E A K + C CS
Sbjct: 200 RMRDGGAGGGEVLSLKGTTLDVGSIMETSAMKKSSQCSCS 239
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 135/169 (79%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF RD F SKSTIGVEF T+ ++I+GK +KAQIWDTA
Sbjct: 25 DYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWDTA 84
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYD+ + Q+F ++ WLNEL H++ N+V +LVGNK DL
Sbjct: 85 GQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKCDL 144
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
+ R V T + + A+ QGL F+ETSALDS+NV AF ++ +IY+I+S
Sbjct: 145 RHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVS 193
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 146/205 (71%), Gaps = 6/205 (2%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 70
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYD ++ QTF + RWL EL H+D N+V +LVGNK D K R
Sbjct: 71 RAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRA 130
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
+ T +G AE + L F+ETSALD++NV AFQ ++TEIY I+S K + E +
Sbjct: 131 IKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL---ENGTSGQNP 187
Query: 197 FNGKTVVLEGEKKEADAEPKKAGCC 221
+ VV + ++ADA+ K CC
Sbjct: 188 LGDRKVVEITKSQDADAKQK---CC 209
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 144/185 (77%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M + + A +++FKVVLIG+S VGKSNLL+RFA++EF +S++TIGVEF T+ + +NG
Sbjct: 1 MGHRMKSNEAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+KAQIWDTAG ER+RA+TSAYYRGAVGALLVYD+++ T++S+ RWL EL+ H+D ++
Sbjct: 61 LTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPHM 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL R V T E K AE +GL F+ETSAL+S+NV AAF V++EI+ +S
Sbjct: 121 VVMLVGNKSDLVSERSVPTEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLSEIHRKVS 180
Query: 181 RKVMI 185
K +I
Sbjct: 181 SKKVI 185
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 154/222 (69%), Gaps = 11/222 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DY+FK+V+ GDS VGKS LL RF ++EF+ SK TIGVEF T+ + ++ K VKAQI
Sbjct: 9 DEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQI 68
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER++A+T+AYYRGA GALL YDI+++QTFD + +WL+EL H+D N++ +LVGN
Sbjct: 69 WDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGN 128
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V T + A+ +GLFF+ETSALDSSNV +AF +++++Y +SRK +
Sbjct: 129 KSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHI--- 185
Query: 188 ELKQKDSSSFNGKTVVLEGEK-KEADAEP------KKAGCCS 222
L S+++ + LEG K K EP K+ CCS
Sbjct: 186 -LVDGHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/162 (65%), Positives = 131/162 (80%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVT 173
+ R V T E +A AE L F+ETSALDS+NV AF+ ++T
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 146/214 (68%), Gaps = 10/214 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A L F E SAL S NV +F ++ IY ++S+ +L
Sbjct: 133 DHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISK-----HQLDT 187
Query: 192 KDSSSFN----GKTVVLEGEKKEADAEPKKAGCC 221
D ++ N G T+ L +E ++ + CC
Sbjct: 188 SDGANANKPSGGPTISLTPAPQEKKSK-SSSNCC 220
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 130/165 (78%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K +KAQIWDTA
Sbjct: 43 DLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTKTIKAQIWDTA 102
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 103 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIVIMLVGNKSDL 162
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
+ R V T E K A +GL F+ETSALD+SNV AFQT++T Y
Sbjct: 163 RHLRAVPTEEAKQFATDEGLSFIETSALDASNVENAFQTILTGPY 207
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 137/177 (77%), Gaps = 1/177 (0%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDIN-GKEVKA 65
+D DYL+K+VLIGDS VGKSN+L+RF RDEF SKSTIGVEF T+ + ++ GK +KA
Sbjct: 4 KDEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQ+F+++ RWL EL H+D N+V +LV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
GNKSDLK R V+ E A + L F+ETSALD++NV AF ++ EIY + +K
Sbjct: 124 GNKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKK 180
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 143/188 (76%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK VLIGDSAVGKSNLL+RF++DEF +SK TIGVEF + + + K +KAQIWDTA
Sbjct: 11 DYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFRA+TS+YYRGA+GALL+YDI+RR TFD+I +WL EL ++ V +LVGNKSDL
Sbjct: 71 GQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ +REV EGK LAE++GLFF+ETSAL++ NV AF ++ I+ ++++++ +
Sbjct: 131 RQSREVEEDEGKTLAESEGLFFLETSALENVNVEEAFLVMIGRIHEVVTQRIASDNKSNG 190
Query: 192 KDSSSFNG 199
++ NG
Sbjct: 191 AATAHING 198
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 145/210 (69%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+G+ VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTNIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K+ A L F E SAL S NV +F ++ IY ++S+ + + +
Sbjct: 133 DHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQGA 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ S G T+ L +E + + CC
Sbjct: 193 QKPS---GPTISLTPAPQEKKGK-NNSNCC 218
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 142/188 (75%), Gaps = 1/188 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VL+GDS VGKSNLL RF ++EF+ N ++TIGVEF T+ M I G+ VKAQIWDTA
Sbjct: 11 DYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQLVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T AYYR AVGALL+YDI+ RQ+F+++ +W +EL HS+ N V ILVGNK DL
Sbjct: 71 GQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVMILVGNKCDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D R + E + A++ + F+ETSAL++ NV AF+ ++TEI+ I S+ +Q++K+
Sbjct: 131 SDQRAIKIEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIFKI-SQVGKFNQQVKE 189
Query: 192 KDSSSFNG 199
D +SFN
Sbjct: 190 LDVTSFNN 197
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 137/187 (73%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA D D L KVVLIGDS VGK+N L+RF R EF +SK TIGVEF T+ + I G
Sbjct: 1 MASRQRSDDDYDMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+K QIWDTAGQER+RA+T+AYYRGAVGALLVYD++R +F+SI RWLNEL H+ ++
Sbjct: 61 DLIKCQIWDTAGQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDM 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL D R+V+ +G+ LA+ +GL F+ETSALD SNV AF V EI+ I+
Sbjct: 121 VVMLVGNKTDLVDQRDVSMQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVR 180
Query: 181 RKVMISQ 187
++ + SQ
Sbjct: 181 KRRLESQ 187
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 144/178 (80%), Gaps = 2/178 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + I+G VK+QIWDTA
Sbjct: 9 NFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G ER+RA+TSAYYRGAVGALLVYDI++ Q+++S+ RWL EL+ H+D ++V +LVGNKSDL
Sbjct: 69 GLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGNKSDL 128
Query: 132 KD-AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYN-ILSRKVMISQ 187
KD A+EV + E KA AE GL F+ETSALD++NV AF+T++ +IY +L K I Q
Sbjct: 129 KDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFETILRDIYTRVLKSKGGIQQ 186
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 155/213 (72%), Gaps = 8/213 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDT 70
DYLFK+VLIGDS VGKSNLL+RF RDEF SKSTIGVEF T+ + + N K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RA+TSAYYRGAVGALLVYDI+++ +F++I +WL EL ++D N+V +LVGNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
LK R + E A+ + L F+ETSAL+++NV AF ++ EIYN+ +K Q K
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK----QGTK 184
Query: 191 QKDSSSFN--GKTVVLEGEKKEADAEPKKAGCC 221
+DS S GK + ++ + E +++ KK+ CC
Sbjct: 185 NEDSMSIQPRGKKINVDDDNDENNSK-KKSKCC 216
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 133/166 (80%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRA 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
V T E +A AE L F+ETSALDS+ V AF+ ++TEIY I+S+K
Sbjct: 121 VPTDEARAFAEKNTLSFIETSALDSTKVEEAFKNILTEIYRIVSQK 166
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 156/223 (69%), Gaps = 22/223 (9%)
Query: 12 DYLFK----------VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
D+LFK +VLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++GK
Sbjct: 7 DFLFKGIYLPGPVLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGK 66
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD +++QTF + RWL EL H+D N+V
Sbjct: 67 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIV 126
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNK D K R+V T++ A+ L F+ETSALD++NV AFQ ++TEIY I+S
Sbjct: 127 IMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSS 186
Query: 182 KVMISQELKQKDSSSFN--GKTVVLEGEK-KEADAEPKKAGCC 221
K + + SSS N G V+E K ++ADA+ K CC
Sbjct: 187 KAL------ENGSSSQNPLGDRKVIEISKTQDADAKQK---CC 220
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 135/172 (78%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S ED DYLFKVVL GDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I+G+ +K
Sbjct: 7 SGEDDKYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIK 66
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+T+AYYRGAVGALLVYDI++R+TF+++ WL EL H++ ++V +L
Sbjct: 67 AQIWDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIML 126
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
VGNK DL+ R + T + K AE GLFFMETSAL+S+ V AF +++ I+
Sbjct: 127 VGNKCDLRHLRTILTEDAKLWAERHGLFFMETSALESTGVENAFYSILRTIF 178
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 154/222 (69%), Gaps = 11/222 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DY+FK+V+ GDS VGKS LL RF ++EF+ SK TIG+EF T+ + ++ K VKAQI
Sbjct: 9 DEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVKAQI 68
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER++A+T+AYYRGA GALL YDI+++QTFD + +WL+EL H+D N++ +LVGN
Sbjct: 69 WDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGN 128
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V T + A+ +GLFF+ETSALDSSNV +AF +++++Y +SRK +
Sbjct: 129 KSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHI--- 185
Query: 188 ELKQKDSSSFNGKTVVLEGEK-KEADAEP------KKAGCCS 222
L S+++ + LEG K K EP K+ CCS
Sbjct: 186 -LVDGHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 151/213 (70%), Gaps = 14/213 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FK+V+IGD AVGKS LL+ FAR+EF +SK TIGVEF T+ + K VKAQIWDTA
Sbjct: 11 DYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+ A+TSAYYRGA GALLVYD++R TF+++GRWL EL H+D N+V +LVGNK+DL
Sbjct: 71 GQERYLAITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + KA AE + +FFMETSA D +NV +F+T++T+IY ILS+K +++
Sbjct: 131 RHLRAVSTEDAKAFAEKESIFFMETSAQD-TNVKTSFETLLTDIYRILSKKSLVAD---- 185
Query: 192 KDSSSFNGKTV--VLEGEKKEADAEPKKAGCCS 222
+ + TV +L G K GCCS
Sbjct: 186 ---TYVDSLTVARLLGGTK----ISVGPGGCCS 211
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 155/216 (71%), Gaps = 9/216 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D + +++FKVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + I+ +KAQI
Sbjct: 4 DDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDIS+ T++S RWL EL+ H+D ++V +LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL++ R V T E + AE +GL FMETSALDS+NV AAF V+T I+ ++ S+
Sbjct: 124 KSDLENLRTVPTDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTAIHTKVA-----SR 178
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E+ + S+ + + G EA E K GCC S
Sbjct: 179 EVTRGSISAVTLSSPI--GPSSEAQEERK--GCCRS 210
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 119/225 (52%), Positives = 152/225 (67%), Gaps = 22/225 (9%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVL+GDS VGKSNLL+RF R+ F +SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 17 DYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTA 76
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSD-MNVVTILVGNKSD 130
GQER+RA+TSAYYRGA GALLVYD++R TF+S RWL EL H+D +LVGNK+D
Sbjct: 77 GQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNKTD 136
Query: 131 L---------KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
L R V + ALAE +GL F+ETSALD++NV AAF+T++TEIY +SR
Sbjct: 137 LARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEIYRAVSR 196
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAG----CCS 222
K + + SS+ + V EG+ + A AG CC+
Sbjct: 197 KALAA-------SSAGDDAGAVGEGQAIQVSAS-DSAGLTTRCCA 233
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 150/210 (71%), Gaps = 8/210 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDT 70
DYLFK+VLIGDS VGKSNLL+RF RDEF SKSTIGVEF T+ + + N K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RA+TSAYYRGAVGALLVYDI+++ +F++I +WL EL ++D N+V +LVGNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
LK R + E A+ + L F+ETSAL+++NV AF ++ EIYN+ +K Q K
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK----QGTK 184
Query: 191 QKDSSSFN--GKTVVLEGEK-KEADAEPKK 217
+DS S GK + + EK KE E K
Sbjct: 185 NEDSMSIQPRGKKINVTKEKIKETTRETNK 214
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/198 (56%), Positives = 138/198 (69%), Gaps = 25/198 (12%)
Query: 12 DYLFKVVLIGDSAVGKS-------------------------NLLARFARDEFYPNSKST 46
DYLFKVVLIGDS VGKS NLL+RF R+EF +KST
Sbjct: 8 DYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETKST 67
Query: 47 IGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIG 106
IGVEF T+ + ++GK +KAQIWDTAGQER+RA+T+AYYRGAVGALLVYDI++ T+ +
Sbjct: 68 IGVEFATRSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHGTYVDVT 127
Query: 107 RWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTA 166
RWL EL H+D N+V +LVGNKSDLK R V T E K A GL F+ETSALD+SNV +
Sbjct: 128 RWLKELRDHADSNIVIMLVGNKSDLKHLRAVPTDEAKTFATENGLSFIETSALDASNVES 187
Query: 167 AFQTVVTEIYNILSRKVM 184
AFQT++T+IY I+S K +
Sbjct: 188 AFQTILTDIYRIVSSKSL 205
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 153/223 (68%), Gaps = 11/223 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M +EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + +
Sbjct: 1 MGNRAEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGT 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
VKAQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +
Sbjct: 59 AAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 119 VVMLVGNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
KQ+ +SS + + + +K CC S
Sbjct: 179 ---------KQRQNSSRTNAITLGSAQAGQEPGPGEKRACCIS 212
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 142/188 (75%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK VLIGDSAVGKSNLL+RF++DEF +SK TIGVEF + + + K +KAQIWDTA
Sbjct: 11 DYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFRA+TS+YYRGA+GALL+YDI+RR TFD+I +WL EL ++ V +LVGNKSDL
Sbjct: 71 GQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ +REV EGK LAE++GL+F+ETSAL++ NV AF ++ I+ ++++++ +
Sbjct: 131 RQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIASENKSNG 190
Query: 192 KDSSSFNG 199
+ NG
Sbjct: 191 AATPHING 198
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 146/213 (68%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIG S VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T+++ RWL EL H+D N+V LVG KS L
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIRLVGTKSAL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A +E L F+ TSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFSEKNNLSFIATSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G V D + P K CC +
Sbjct: 188 DESP---GNNFVDISVPPTTDGQNPNKLQCCQN 217
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 143/199 (71%), Gaps = 2/199 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI++ ++++S+ RWL EL H+D N++ LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A L F E SAL S NV +F ++ IY ++S+ + + + KQ
Sbjct: 133 DHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNDSKQ 192
Query: 192 KDSSSFNGKTVVLEGEKKE 210
+++ G T+ L +E
Sbjct: 193 TNTAG--GPTISLTPAPQE 209
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 152/219 (69%), Gaps = 8/219 (3%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I+G+ +K
Sbjct: 7 SGKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIK 66
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+T+AYYRGAVGALLVYDI++R+TF+++ WL EL + ++++V +L
Sbjct: 67 AQIWDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDMVVML 126
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL+ R V T + K AE GLFFMETSAL+S+ V AF ++ I+ +
Sbjct: 127 VGNKCDLRHLRTVQTEDAKLWAERHGLFFMETSALESTGVENAFYYILKTIFEAVRSHPP 186
Query: 185 ISQ-ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+S ++K S +N + +V D+ CCS
Sbjct: 187 VSNVDMKM---SPYNNQPIV----SPNTDSSKSGRRCCS 218
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 145/210 (69%), Gaps = 2/210 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGDS VGKSNLL+RF RDEF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI++ +T++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E + A L F E SAL S NV +F ++ IY ++S+ + + +
Sbjct: 133 DHLRAVPTEEARNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTND-GG 191
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + G T+ L +E ++ + CC
Sbjct: 192 SNKPTTGGPTISLTPAPQEKRSK-NNSNCC 220
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 151/213 (70%), Gaps = 8/213 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDT 70
DYLFK+VLIGDS VGKSNLL+RF RDEF SKSTIGVEF T+ + + N K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RA+TSAYYRGAVGALLVYDI+++ +F++I +WL EL ++D N+V +LVGNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
LK R + + A+ + L F+ETSAL+++NV AF ++ EIYN+ +K Q K
Sbjct: 129 LKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK----QATK 184
Query: 191 QKDSSSFN--GKTVVLEGEKKEADAEPKKAGCC 221
D+ S GK + ++ + + + KK CC
Sbjct: 185 NDDNLSIQPRGKKINVDDD-NDKNETKKKNKCC 216
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 140/183 (76%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+ D+ DY+FK+VLIGDS VGKSNLL+RF +DEF + K+TIGVEF T+ + + K +K
Sbjct: 2 TRNDQDHDYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+ A+TSAYYRGAVGALL+YDI++ +F +I +WL+E+ H++ ++V +L
Sbjct: 62 AQIWDTAGQERYVAITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVML 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDLK R+V + A AE + F+ETSALD+SNV FQ ++TEIY +L+++ M
Sbjct: 122 VGNKSDLKHLRQVRQEDATAFAEKNNIAFIETSALDASNVELTFQRIITEIYQLLNKRSM 181
Query: 185 ISQ 187
+ +
Sbjct: 182 VPE 184
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/223 (50%), Positives = 152/223 (68%), Gaps = 11/223 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M SEED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + +
Sbjct: 1 MGNRSEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGT 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
VKAQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +
Sbjct: 59 AAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 119 VVMLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
KQ+ +SS + + + +K CC S
Sbjct: 179 ---------KQRQNSSRTNAITLGSAQPGQEPGPGEKRACCIS 212
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 133/163 (81%), Gaps = 3/163 (1%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++ K +KA
Sbjct: 6 RAEDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDAKVLKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF++ RWL EL H+D N+V +L+
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNIVVMLI 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAF 168
GNKSDL+ V+T +GKA AE + L+FMETSAL+++NV AF
Sbjct: 126 GNKSDLRHLVAVSTDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 156/222 (70%), Gaps = 8/222 (3%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
EED DYLFK+V+IGDSAVGKSNLL RF R+EF +K+TIGV+F T+ ++I K + A
Sbjct: 4 EEDN--DYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITA 61
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
Q WDTAGQERFRAVTS YYRGAVGA++VYDI+ + +F ++ RWLNEL +D +++ ++V
Sbjct: 62 QCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMV 121
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL AREV+T E ++ A++ + F+ETSAL+SSNV AF+ ++T+IY+ +K +
Sbjct: 122 GNKSDLDSAREVSTQEAQSFAQSHKISFLETSALNSSNVNLAFERLLTDIYHHFGQKKQV 181
Query: 186 ----SQELKQKDSSSFNGKTVVLEGE--KKEADAEPKKAGCC 221
QE + +SS + T + E + + KK GCC
Sbjct: 182 VMDDGQEWLKPSTSSGHKITPLAETPVSSTTSTHQEKKKGCC 223
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 152/224 (67%), Gaps = 12/224 (5%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSNLL+RF +EF SKSTIGVEF T+ ++I+ VKAQI
Sbjct: 2 DDEYDYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQI 61
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDT+GQER+RA+T AYYRGAVGALLVYDI+R+ +F ++ WL EL H+D N+V +LVGN
Sbjct: 62 WDTSGQERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVGN 121
Query: 128 KSDLKD-AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
K DL + +R+VTT +G +LAE +G F+ETSALD++NV AF TV IY+ L +K S
Sbjct: 122 KVDLSESSRQVTTEDGGSLAEQEGFLFVETSALDATNVDKAFATVFDTIYSNLPKKTNQS 181
Query: 187 QELKQKDSSSFNGKTVVLEGE------KKEADAEPKK---AGCC 221
+ ++ G+ + L +E + KK GCC
Sbjct: 182 ADAATNQPTA--GERIQLRPPSVRGLSSREEKGQQKKENGGGCC 223
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 154/219 (70%), Gaps = 12/219 (5%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 5 TEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S+
Sbjct: 123 VGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK--- 179
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++++S+ N + L + + P K CC S
Sbjct: 180 -----QRQNSTRTNA--ITLSSAQAGQEPGPGKRACCIS 211
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 157/222 (70%), Gaps = 15/222 (6%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
E+ +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + I+G VK+Q
Sbjct: 4 EEEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAG ER+RA+TSAYYRGAVGALLVYDI++ Q+++S+ RWL EL+ H+D ++V +LVG
Sbjct: 64 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVG 123
Query: 127 NKSDLKD-AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY-NILSRKVM 184
NK DLKD A+EV + E KA AE GL F+ETSALD++NV AF++++ +IY +L K
Sbjct: 124 NKCDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFESILRDIYMRVLKSKGE 183
Query: 185 ISQELK---QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
Q K++S T+V E +K CC S
Sbjct: 184 TQQPSTINLSKEASPTQSITLVTE----------QKRSCCQS 215
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 150/214 (70%), Gaps = 8/214 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF DEF+ SKSTIGVEF T+ +D++GK++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS++ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR-KVMISQELK 190
R V T E K A+ L F ETSAL+S NV AF+ ++T IY ++S+ +V + +
Sbjct: 131 SHLRAVPTDEAKKFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGVDNN 190
Query: 191 QKDSSSFNGKTVVL---EGEKKEADAEPKKAGCC 221
++ G T+ L EKK++ + CC
Sbjct: 191 NNTLNAPKGPTISLTPAPNEKKKSSSN----NCC 220
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 136/183 (74%), Gaps = 10/183 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVL+GDS VGKSNLL+RF R+ F +SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 17 DYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTA 76
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSD-MNVVTILVGNKSD 130
GQER+RA+TSAYYRGA GALLVYD++R TF+S RWL EL H+D +LVGNK+D
Sbjct: 77 GQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNKTD 136
Query: 131 L---------KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
L R V + ALAE +GL F+ETSALD++NV AAF+T++TEIY +SR
Sbjct: 137 LARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEIYRAVSR 196
Query: 182 KVM 184
K +
Sbjct: 197 KAL 199
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 156/218 (71%), Gaps = 10/218 (4%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 5 AEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S+
Sbjct: 123 VGNKSDLSHAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSK--- 179
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
++++++ N T+ +E +E KKA C S
Sbjct: 180 -----QRQNNARANAITLGSAQPGQELGSEEKKACCIS 212
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 146/197 (74%), Gaps = 2/197 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV++GDSAVGK+ LL RF +DEF+ +SKSTIGVEFQT+ + ++ K VKAQIWDTA
Sbjct: 20 DYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTA 79
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA++VYDI+RR+TF+++ RW+ EL H+D + V L+GNK+D+
Sbjct: 80 GQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKADM 139
Query: 132 KDA-REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM-ISQEL 189
REV E AE QGLFF E SAL NV AF T++ EI+ ++SR+ + + +
Sbjct: 140 PAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDEAR 199
Query: 190 KQKDSSSFNGKTVVLEG 206
+ +D + + + L+G
Sbjct: 200 RMRDGGAGGVQVLSLKG 216
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 148/219 (67%), Gaps = 12/219 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RF ++EF +SKSTIGVEFQT+ + I K +KAQIWDTA
Sbjct: 6 DYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++R TFD + RW+ EL H+D ++V +L+GNK+DL
Sbjct: 66 GQERYRAVTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIGNKADL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D R V T + AE QGLFF ETSAL NV AF ++ EIY ++ +K L+
Sbjct: 126 VDLRAVPTEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLLEEIYGVICKK-----SLEC 180
Query: 192 KDSSSFNGKTVVLEGEKKEA-------DAEPKKAGCCSS 223
+ + + L G K + +E KK CS
Sbjct: 181 GNGNPHAADAITLRGSKIDGISGTDLEISEMKKLSACSC 219
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 145/183 (79%), Gaps = 2/183 (1%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
E+ +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + ++G VK+Q
Sbjct: 4 EEEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLVKSQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAG ER+RA+TSAYYRGAVGALLVYDI++ Q+++++ RWL EL+ H+D ++V +LVG
Sbjct: 64 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVMLVG 123
Query: 127 NKSDLKD-AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYN-ILSRKVM 184
NK DLKD A+EV + E KA AE GL F+ETSALD++NV AF+T++ +IY +L K
Sbjct: 124 NKCDLKDEAQEVPSEEAKAYAEQNGLLFIETSALDATNVEVAFETILRDIYTRVLKLKGG 183
Query: 185 ISQ 187
I Q
Sbjct: 184 IQQ 186
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 152/216 (70%), Gaps = 10/216 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D + ++++KVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + ++ +KAQI
Sbjct: 4 DESYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDIS+ T++S RWL EL+ H+D ++V +LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K DL R V + E +A AE +G+ FMETSALDS+NV AAF V++ I +K + SQ
Sbjct: 124 KRDLDTLRTVPSEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSAI-----QKKVASQ 178
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + S+ V L D + +K GCC S
Sbjct: 179 QVTRGSISA-----VTLSSPIGATDTQERKGGCCKS 209
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 136/174 (78%), Gaps = 1/174 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV++GDSAVGK+ LL RF +DEF+ +SKSTIGVEFQT+ + ++ K VKAQIWDTA
Sbjct: 28 DYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWDTA 87
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA++VYDI+RR+TF+++ RW+ EL H+D + V L+GNK+D+
Sbjct: 88 GQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKADM 147
Query: 132 KDA-REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
+ REV E AE QGLFF E SAL NV AF T++ EI+ ++SR+ +
Sbjct: 148 PASRREVAADEAARFAEEQGLFFSEASALSGDNVERAFLTLLEEIFAVVSRRAL 201
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 153/217 (70%), Gaps = 5/217 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RFA++EF +SK+TIGVEFQT+ + IN K +KAQIWDTA
Sbjct: 25 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIWDTA 84
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQ+FD + RW+ EL H+D ++V +L+GNK DL
Sbjct: 85 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNKGDL 144
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI-YNILSRKVM--ISQE 188
D R V + + AE QGLFF ETSAL NV +AF ++ EI ++S++ + +
Sbjct: 145 VDQRVVLSEDAVEFAEEQGLFFSETSALTGENVESAFLKLLQEINTRVVSKRSLSDCNHG 204
Query: 189 LKQKDSSSFNGKTV-VLEGEKKEADAEPKKAGC-CSS 223
K +S G + V+ G + E K C CSS
Sbjct: 205 KKTNGGNSLKGSKIDVISGPELEITEVKKVPSCSCSS 241
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 154/220 (70%), Gaps = 4/220 (1%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
+ D DY+FKVV++GDS VGKS LL RF R+EF SK+TIGVEF T+ + ++ K VKA
Sbjct: 7 DSDEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVVKA 66
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER++A+T+AYYRGA GALL YDI+ RQ+FD + +WL+EL H+D N++ +LV
Sbjct: 67 QIWDTAGQERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHAD-NIIVMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL R V E K A+ +GLFF+ETSALDS+NV +AF ++++IY + +K +I
Sbjct: 126 GNKSDLSSGRAVPMEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLSQIYATVGKKHII 185
Query: 186 SQ--ELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
++ EL K + G + + ++ E ++ CCS
Sbjct: 186 AEGAELNWDKVNLELEGIKIKVSSQEAECQKAKRRFDCCS 225
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 152/213 (71%), Gaps = 15/213 (7%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVL GDS VGKSNLL RF +++F P+SK+TIGVEF T+ + I+GK +KAQIWDTA
Sbjct: 9 DYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGA+GA+LVYDI+ +Q+F+S+ RW+ E+ ++D ++V +++GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIMIIGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R + T G+ LA+ + FME SA D +NV AF ++ +IY L++ +L++
Sbjct: 129 KHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQNLTK------QLQK 182
Query: 192 KDSSSFNGKTVVLEGEKKEAD---AEPKKAGCC 221
D S L+GEK + + + KK GCC
Sbjct: 183 YDQMSH------LQGEKLDLEITTSGNKKQGCC 209
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 133/169 (78%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF RD F SKSTIGVEF T+ ++I+GK +KAQIWDTA
Sbjct: 14 DYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDGKVIKAQIWDTA 73
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD+ Q+F ++ WL EL+ H++ N+V +LVGNK DL
Sbjct: 74 GQERYRAITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNIVVMLVGNKCDL 133
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
+ R V T + + A+ QGL F+ETSALDS+NV AF ++ IY+I+S
Sbjct: 134 RHLRSVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQNIYSIVS 182
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/226 (50%), Positives = 156/226 (69%), Gaps = 17/226 (7%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M +EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + +
Sbjct: 1 MGNRTEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGT 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+KAQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +
Sbjct: 59 AAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 119 VVMLVGNKSDLHQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
KQ+ +S+ +T + +A EP +K CC S
Sbjct: 179 ---------KQRQNST---RTNAIALGSAQAGQEPGAGQKRACCIS 212
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 153/219 (69%), Gaps = 21/219 (9%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +K+QIWDTAGQER+
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERY 78
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYD+S+ QT++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 79 RAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 138
Query: 137 VTTAEGKALAEAQ---------GLFFMETSALDSSNVTAAFQTVVT----EIYNILSRKV 183
V T E K A Q L F+ETSALD+SNV AFQ ++T EI+ I+S
Sbjct: 139 VPTEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQNILTDLLAEIFRIVS--- 195
Query: 184 MISQELKQKDSSSFN-GKTVVLEGEKKEADAEPKKAGCC 221
S+ L+ DSS+ G V+E K D+E KK GCC
Sbjct: 196 --SKALESGDSSANQLGDRKVVE-ITKTPDSE-KKQGCC 230
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/160 (65%), Positives = 129/160 (80%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++GK VKAQIWDTAGQER+
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDIS+ T+ ++ RWL EL H+D N+V +LVGNKSDLK R
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
V T E K + L F+ETSALD+SNV +AFQT++T++Y
Sbjct: 121 VPTEEAKNFSTENELSFIETSALDASNVESAFQTILTDVY 160
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 151/218 (69%), Gaps = 12/218 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RF +DEF +SKSTIGVEFQT+ + I GK +KAQIWDTA
Sbjct: 17 DYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIWDTA 76
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+L+YDI++R TFD + RW++EL H+D ++V +L+GNK DL
Sbjct: 77 GQERYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIGNKVDL 136
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D R V + AE QGLFF ETSA NV +AF ++ EIY+ + +K L+
Sbjct: 137 VDLRAVPAEDAVEFAEDQGLFFSETSAFSGDNVDSAFFRLLEEIYDTVCKKA-----LEC 191
Query: 192 KDSSSFNGKTVVLEGEKKEA-------DAEPKKAGCCS 222
+ +S + L+G K + +E KK+ CS
Sbjct: 192 GNGNSNVADAITLKGSKIDGISGTDLEISEVKKSSACS 229
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 148/209 (70%), Gaps = 4/209 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFK+VLIGDS VGK+NLL+RF ++EF +SK TIGVEF T+ + K +KAQIWDTA
Sbjct: 10 DFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKYIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQE++RA+T+AYYRGAVGAL +YDI+++QTFD++ +WL+EL ++D N++ +L+GNK DL
Sbjct: 70 GQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIICMLIGNKCDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++ R+V T + AE L FMETSA + NV AFQ ++TEIYN L + E K+
Sbjct: 130 QEMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYNNLKTR---PNEEKK 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGC 220
K NG ++ + K+ AE +K C
Sbjct: 187 KAQPQQNGNNIIKDF-KQPTQAEKEKKCC 214
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 151/215 (70%), Gaps = 4/215 (1%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK VLIGDS VGKSN+L+RFA+DEF +SK TIGVEF + + + K +KAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+TS+YYRGA+GA+LVYDIS R +++++ +WL EL ++V +LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVVVLVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K DL ++REV EGK AE +GL FMETSAL + NV F ++T IY++ S+K + ++
Sbjct: 126 KCDLDESREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAAK 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
++++ + NGK + + E A + + CCS
Sbjct: 186 -MEEQPINLLNGKEIHI---ADEVTATKQTSTCCS 216
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 141/216 (65%), Gaps = 14/216 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF DEF NSKSTIGVEF T+ +++ GK+VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWDTA 71
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKSDL 131
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A+ + F ETSAL++ NV AF+ ++T IY ++S+ Q
Sbjct: 132 AHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSK--------NQ 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEP------KKAGCC 221
D S NG V G P K CC
Sbjct: 184 VDLSENNGSGTVPRGPTISLAPAPSEKSKKKTNNCC 219
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 140/187 (74%), Gaps = 5/187 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDT 70
DYLFK+VLIGDS VGKSNLL+RF RDEF SKSTIGVEF T+ + + N K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RA+TSAYYRGAVGALLVYDI+++ +F++I +WL EL ++D N+V +LVGNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
LK R + E A+ + L F+ETSAL+++NV AF ++ EIYN+ +K Q K
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK----QGTK 184
Query: 191 QKDSSSF 197
+DS S
Sbjct: 185 NEDSMSI 191
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 155/217 (71%), Gaps = 10/217 (4%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 4 AEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVVK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGAL+V+DI++ QT+D + RWL EL+ H++ ++V +L
Sbjct: 62 AQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVML 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK+DL AREV E K A+ GL F+ETSALDS+NV AF+T++ EI+ KV
Sbjct: 122 VGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIF----YKV- 176
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
Q+ KQ+ S S N ++ E A + ++ CC
Sbjct: 177 --QKQKQRSSQS-NTVSLASESPASTAPVQAERRPCC 210
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 157/224 (70%), Gaps = 13/224 (5%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M +EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + +
Sbjct: 1 MGNRTEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGT 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+KAQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +
Sbjct: 59 AAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 119 VVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP-KKAGCCSS 223
+ ++++S+ N + L G + + P +K CC S
Sbjct: 179 K--------QRQNSTRTNA--ITLGGAQAGQEPGPGEKRACCIS 212
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 155/222 (69%), Gaps = 12/222 (5%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A+ +E+D DYLFKVVL GDS VGKSNLL+RF R++F +S++TIGVEF T+ + + K
Sbjct: 3 AYRAEDDY--DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
VKAQIWDTAGQE SAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V
Sbjct: 61 IVKAQIWDTAGQE------SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 114
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNK+DL+ R ++T E KA AE + FFMETSAL++ NV AF V+T+IY ++S+
Sbjct: 115 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 174
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
K + E +++ ++ G + + A KK GCCS+
Sbjct: 175 KAL---EAGDDPTTALPKGQMINVGGRDDISA-VKKPGCCSA 212
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 148/212 (69%), Gaps = 9/212 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S KQ
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS---------KQ 180
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ +SS + + + + +K CC S
Sbjct: 181 RQNSSRSSAITLGSAQAGQEPGSGEKRTCCIS 212
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 151/219 (68%), Gaps = 11/219 (5%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 5 NEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS---- 178
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
KQ+ +S+ + + + +K CC S
Sbjct: 179 -----KQRQNSTRTNAITLGSAQAGQEPGPGEKRACCIS 212
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 155/218 (71%), Gaps = 10/218 (4%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + +K
Sbjct: 5 TEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S+
Sbjct: 123 VGNKSDLSRAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK--- 179
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
++++S+ N ++ +EA K+A C S
Sbjct: 180 -----QRQNSARTNAISLGSAQAGQEAGPGEKRACCIS 212
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 153/217 (70%), Gaps = 7/217 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YLFK+V+IGDSAVGKSNLL RF R+EF +K+TIGV+F T+ ++I+ K + AQ WDTA
Sbjct: 7 EYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQCWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFRAVTS YYRGAVGA++VYDI+ + +F ++ RWLNEL ++ +++ ++VGNKSDL
Sbjct: 67 GQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ +REV T E KA AE+ + F+ETSAL+S+NV AF+T++T+I+N++S K + + Q
Sbjct: 127 EMSREVPTKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNLVSSKKPVVVDDVQ 186
Query: 192 KDSSSFNGKTVVLEGEKKE-------ADAEPKKAGCC 221
GK + + + + KK GCC
Sbjct: 187 NWLVPNQGKKLTPLSDPAPQLTTTTASTHQQKKGGCC 223
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 155/218 (71%), Gaps = 10/218 (4%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 5 TEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S+
Sbjct: 123 VGNKSDLSQAREVPTDEARMFAENNGLLFIETSALDSTNVELAFETVLKEIFTKVSK--- 179
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+++++S N T+ +E + +KA C S
Sbjct: 180 -----QRQNNSRANAVTLSNAQPGQELGSVERKACCIS 212
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 138/188 (73%), Gaps = 4/188 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M + + +++DY+FKVV+IGDS VGK+ LL RF RDEF +SKSTIG+EFQT+ + + G
Sbjct: 1 MMHATTDRKSQDYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAG 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RAVTSAYYRGA+GA+LVYD++RR +F+ RW+ EL H+D ++
Sbjct: 61 KRVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSI 120
Query: 121 VTILVGNKSDLKDA----REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
V +L+GNK+DL A R V E A AE QGLFF E SAL NV AAF ++ EI+
Sbjct: 121 VVVLIGNKADLAVAAVGRRAVDVEEATAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIH 180
Query: 177 NILSRKVM 184
+SR+ +
Sbjct: 181 AAVSRRPL 188
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 152/216 (70%), Gaps = 11/216 (5%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
+FK+V++GDS VGKS LL RF ++EF+ SK TIGVEF T+ + ++ K VKAQIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
ER++A+T+AYYRGA ALL YDI+++QTFD + +WL+EL H+D N++ +LVGNKSDL
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVGNKSDLSS 120
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKD 193
R V T + A+ +GLFF+ETSALDSSNV +AF +++++Y +SRK++ L
Sbjct: 121 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKLI----LVDGH 176
Query: 194 SSSFNGKTVVLEGEK-KEADAEP------KKAGCCS 222
S+++ + LEG K K EP K+ CCS
Sbjct: 177 ESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 212
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 129/160 (80%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ ++++ K VKAQIWDTAGQER+
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDIS+ T+ ++ RWL EL H+D N+V +LVGNKSDLK R
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
V T E K + L F+ETSALD+SNV +AFQT++T++Y
Sbjct: 121 VPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVY 160
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 150/216 (69%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK VLIGDS VGKSNLL+RFA+DEF +SK TIGVEF + + + K +KAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+TS+YYRGA+GA+LVYDISRR +++++ +WL EL ++V +LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVVVLVGN 125
Query: 128 KSDLK-DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
K DL +REV EGK AE +GL FMETSAL + NV F ++T IY++ S+K + +
Sbjct: 126 KCDLDGQSREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAA 185
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ + +K + NGK + + E A + + CCS
Sbjct: 186 K-MDEKPINLLNGKEIHI---ADEVTATKQSSTCCS 217
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 147/216 (68%), Gaps = 9/216 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQI
Sbjct: 6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL AREV T E AE GL F+ETSALDS+NV AFQTV+ EI+ +S
Sbjct: 126 KSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVS------- 178
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
KQK +S+ + + + +K CC S
Sbjct: 179 --KQKQNSTRTSAITLGNAQAGQDPGPGEKRACCIS 212
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 156/222 (70%), Gaps = 10/222 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M +EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + +
Sbjct: 1 MGNGTEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGT 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
VKAQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +
Sbjct: 59 AAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 119 VVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ ++++S+ N T+ +E + K+A C S
Sbjct: 179 K--------QRQNSTRTNAITLGGAQGGQEPGSGEKRACCIS 212
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 152/215 (70%), Gaps = 5/215 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RFA++EF +SK+TIGVEFQT+ + IN K +KAQIWDTA
Sbjct: 25 DYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIWDTA 84
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQ+FD + RW+ EL H+D ++V +L+GNK D
Sbjct: 85 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNKGDF 144
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI-YNILSRKVM--ISQE 188
D R V + + AE QGLFF ETSAL NV +AF ++ EI ++S++ + +
Sbjct: 145 VDQRVVLSEDAVEFAEEQGLFFSETSALTGGNVESAFLKLLQEINTRVVSKRSLSDCNHG 204
Query: 189 LKQKDSSSFNGKTV-VLEGEKKEADAEPKKAGCCS 222
K +S G + V+ G + E E KK CS
Sbjct: 205 KKTNGGNSLKGSKIDVISGPELEI-TEVKKVPSCS 238
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/223 (48%), Positives = 153/223 (68%), Gaps = 11/223 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M +EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + +
Sbjct: 1 MGNRAEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGT 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+KAQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +
Sbjct: 59 AAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL +REV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 119 VVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
KQ+ +++ ++ G + +K CC S
Sbjct: 179 ---------KQRQNNARTNAVILGSGPAGQELGPGEKRACCIS 212
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 152/227 (66%), Gaps = 14/227 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA D DYLFK VLIGDS VGKSNL++RFA+DEF +SK TIGVEF + + +
Sbjct: 1 MAVADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRD 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQERFRA+TS+YYRGA+GA+LVYDI++R TF ++G+WL+EL ++
Sbjct: 61 KLIKAQIWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDM 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL +R+V EGK +AE + L FMETSAL + NV AF ++T+I++I+S
Sbjct: 121 VVVLVGNKSDLDQSRQVEREEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIIS 180
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKK-----EADAEPKKAGCCS 222
+K + + NG + L K+ E A + CCS
Sbjct: 181 QKSL---------ETKMNGTALNLPSGKEIHIADEVTATKQAKYCCS 218
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 151/227 (66%), Gaps = 14/227 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA D DYLFK VLIGDS VGKSNL++RFA+DEF +SK TIGVEF + + +
Sbjct: 1 MAVADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRD 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQERFRA+TS+YYRGA+GA+LVYDI++R TF ++G+WL+EL ++
Sbjct: 61 KLIKAQIWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDM 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL +R+V EGK AE + L FMETSAL + NV AF ++T+I++I+S
Sbjct: 121 VVVLVGNKSDLDQSRQVEREEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIIS 180
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKK-----EADAEPKKAGCCS 222
+K + + NG + L K+ E A + CCS
Sbjct: 181 QKSL---------ETKMNGTALNLPSGKEIHIADEVTATKQAKYCCS 218
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 150/219 (68%), Gaps = 11/219 (5%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 9 TEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 66
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +L
Sbjct: 67 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 126
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 127 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS---- 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
KQ+ +S + + + +K CC S
Sbjct: 183 -----KQRQNSIRTNAITLGSAQAGQEPGPGEKRACCIS 216
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 150/226 (66%), Gaps = 13/226 (5%)
Query: 5 SEEDRAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
S ED DY LFK+VLIGDS VGKSNLL+RF ++EF +SKSTIGVEF T+ ++I+GK
Sbjct: 2 SSEDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKR 61
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL+EL ++D NV
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAV 121
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
L+GNKSDL R V T E K A+ L F ETSAL+S NV AF+ ++ IY +S+
Sbjct: 122 GLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKH 181
Query: 183 VM----ISQELKQKDSSSFNGKTVVL---EGEKKEADAEPKKAGCC 221
M S +S+ NG T+ L E K+A+ CC
Sbjct: 182 QMDLGDSSANGNANGASAPNGPTISLTPTPNENKKANGN----NCC 223
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 150/219 (68%), Gaps = 11/219 (5%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 5 TEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS---- 178
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
KQ+ +S + + + +K CC S
Sbjct: 179 -----KQRQNSIRTNAITLGSAQPGQEPGPGEKRACCIS 212
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 150/219 (68%), Gaps = 11/219 (5%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 5 TEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS---- 178
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
KQ+ +S + + + +K CC S
Sbjct: 179 -----KQRQNSIRTNAITLGSAQAGQEPGPGEKRACCIS 212
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 159/224 (70%), Gaps = 8/224 (3%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+E+ AE YLFK+V+IGDSAVGKSNLL RF R+EF +K+TIGV+F T+ ++I+ K +
Sbjct: 2 PQEEEAE-YLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTIT 60
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQ WDTAGQERFRAVTS YYRGAVGA++VYDI+ + +F ++ RWLNEL ++ +++ ++
Sbjct: 61 AQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMM 120
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNIL-SRKV 183
VGNKSDL+ +REV T E +A AE+ + F+ETSAL+S+NV +F+ ++T+IY+++ S+K
Sbjct: 121 VGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKP 180
Query: 184 MISQELKQKDSSSFNGKTVVLEGEKKEADA------EPKKAGCC 221
M+ + + + K L + A + KK+GCC
Sbjct: 181 MVVDDTQNWLVPNQGKKLTPLSDPAPQLTANTTSTHQEKKSGCC 224
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 144/210 (68%), Gaps = 1/210 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF +EF SKSTIGVEF T+ +++ GK++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ T+++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V TAE K A L F ETSAL+S NV AF+ ++T IY ++S+ + +
Sbjct: 131 AHLRAVPTAEAKNFASENELLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDSGN 190
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+++ G T+ L E + + + CC
Sbjct: 191 NAAAAPKGPTISLTPTPNE-NKKSSSSNCC 219
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 141/199 (70%), Gaps = 4/199 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV++GDSAVGK+ LL RFA+DEF+ +SKSTIGVEFQT+ + ++ K VKAQIWDTA
Sbjct: 23 DYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWDTA 82
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA++VYD++RR TFD + RW+ EL H+D + V LVGNK+D
Sbjct: 83 GQERYRAVTSAYYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADGSTVVALVGNKADA 142
Query: 132 K-DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
REV E AE QGLFF E SAL NV AF ++ E++ ++SR+ + E +
Sbjct: 143 PAHRREVPADEAARFAEEQGLFFSEASALTGDNVERAFLALLEEVFAVVSRRALELDEAR 202
Query: 191 QK---DSSSFNGKTVVLEG 206
+ D G+ + L G
Sbjct: 203 RTRNGDGDGDRGQALSLRG 221
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 129/176 (73%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSN+L+RF R EF S+STIGVEF T+ + I K VKAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKAQIWDTA 75
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+R +FD+ RWL EL H+D ++V +LVGNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLVGNKCDL 135
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
R + E + L F+ETSAL+++NV AFQ ++ +IY + S K SQ
Sbjct: 136 SHLRAIEEEEAEKFCSDNDLLFIETSALEATNVEEAFQNILEDIYKVNSSKPTPSQ 191
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 151/218 (69%), Gaps = 17/218 (7%)
Query: 11 EDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIW 68
EDY +FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIW
Sbjct: 7 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 66
Query: 69 DTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNK 128
DTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGNK
Sbjct: 67 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 126
Query: 129 SDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQE 188
SDL AREV T E AE GL F+ETSALDS+NV AFQTV+ EI+ +S
Sbjct: 127 SDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVS-------- 178
Query: 189 LKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
KQK +S+ +T + +A +P +K CC S
Sbjct: 179 -KQKQNST---RTSAITLGNAQAGQDPGLGEKRACCIS 212
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 147/215 (68%), Gaps = 9/215 (4%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
+D +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQ
Sbjct: 5 KDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQ 64
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVG
Sbjct: 65 IWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG 124
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL AREV T E AE GL F+ETSALDS+NV AFQTV+ EI+ +S
Sbjct: 125 NKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVS------ 178
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
KQ+ +S+ + E + +K CC
Sbjct: 179 ---KQRQNSTRANAITLGNAEAGQDSGPGEKRACC 210
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 148/207 (71%), Gaps = 10/207 (4%)
Query: 18 VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFR 77
VL S + KSNLL+RF R+EF SKSTIGVEF T+ + GK +KAQIWDTAGQER+R
Sbjct: 22 VLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYR 81
Query: 78 AVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREV 137
A+TSAYYRGAVGALLVYDI+++ +FD++ RWL EL H+D N+V +LVGNKSDL+ + V
Sbjct: 82 AITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAV 141
Query: 138 TTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSF 197
TT + A AE+ GL F+ETSALD+SNV AF+++++EIY + S+K L++ +S+F
Sbjct: 142 TTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKA-----LEKGSTSNF 196
Query: 198 NG---KTVVLEGEKKEADAEPKKAGCC 221
+T+V+ E E KA CC
Sbjct: 197 APNATQTIVINPPADEGKTE--KAKCC 221
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 153/216 (70%), Gaps = 7/216 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+V+IGDSAVGKSNLL RF R+EF +K+TIGV+F T+ ++I GK + AQ WDTA
Sbjct: 7 DYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQCWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFRAVTS YYRGA+GA++VYDI+ + +F ++ RWLNEL ++ +++ ++VGNKSDL
Sbjct: 67 GQERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMVGNKSDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK----VMISQ 187
+ +REV+T E ++ AEA + F+ETSAL+S+NV +F+ ++T+IYN +K VM
Sbjct: 127 ESSREVSTREAQSFAEANKISFLETSALNSTNVNLSFEKLLTDIYNQFGQKKAQVVMDDG 186
Query: 188 ELKQKDSSSFNGKTVVLEGEKK--EADAEPKKAGCC 221
+ K + S T + E EPKK GCC
Sbjct: 187 QEWLKPTQSGQKITPLNEAPVNVTSTHQEPKK-GCC 221
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 149/217 (68%), Gaps = 11/217 (5%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 5 TEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS---- 178
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
KQ +S + + + + +K CC
Sbjct: 179 -----KQNQNSPRSNAIALGSAQAGQEPGPGQKRACC 210
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 149/226 (65%), Gaps = 13/226 (5%)
Query: 5 SEEDRAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
S ED DY LFK+VLIGDS VGKSNLL+RF ++EF +SKSTIGVEF T+ ++I GK
Sbjct: 2 SSEDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKR 61
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL+EL ++D NV
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAV 121
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
L+GNKSDL R V T E K A+ L F ETSAL+S NV AF+ ++ IY +S+
Sbjct: 122 GLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKH 181
Query: 183 VM----ISQELKQKDSSSFNGKTVVL---EGEKKEADAEPKKAGCC 221
M S +S+ NG T+ L E K+A+ CC
Sbjct: 182 QMDLGDSSANGNANGASAPNGPTISLTPTPNENKKANGN----NCC 223
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 140/210 (66%), Gaps = 2/210 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF +EF SKSTIGVEF T+ +++ GK++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A+ L F ETSAL+S NV AF+ ++T IY ++S+ + E
Sbjct: 131 AHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLNEYGN 190
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ G T+ L A K CC
Sbjct: 191 NAGQAPKGPTISL--TPAPAKKNKKSDNCC 218
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 151/214 (70%), Gaps = 12/214 (5%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D A +++FKVVLIG+S VGKSNLL+R+ ++EF +S++TIGVEF T+ +++NG +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDI++ T+DS+ RWL EL+ H++ N+V +LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DL+ R V T E + AE L F+E+SAL+S+NV AAF V+ EI +K ++
Sbjct: 124 KTDLELERSVPTEEARGFAENHKLLFLESSALESTNVEAAFNNVLMEI-----QKKTHNK 178
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
EL Q + + V L K E E K CC
Sbjct: 179 ELVQGAN-----RGVSLNSSKAEIITENKP--CC 205
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 149/212 (70%), Gaps = 9/212 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + +KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S KQ
Sbjct: 130 SQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS---------KQ 180
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ +S+ + + + + + +K CC S
Sbjct: 181 RQNSTRTNTITLGDTQPGQDPSSGEKKACCIS 212
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 149/226 (65%), Gaps = 13/226 (5%)
Query: 5 SEEDRAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
S ED DY LFK+VLIGDS VGKSNLL+RF ++EF +SKSTIGVEF T+ ++I+GK
Sbjct: 2 SSEDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKR 61
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL+EL +D NV
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAV 121
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
L+GNKSDL R V T E K A+ L F ETSAL+S NV AF+ ++ IY +S+
Sbjct: 122 GLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKH 181
Query: 183 VM----ISQELKQKDSSSFNGKTVVL---EGEKKEADAEPKKAGCC 221
M S +S+ NG T+ L E K+A+ CC
Sbjct: 182 QMDLGDSSANGNANGASAPNGPTISLTPTPNENKKANGN----NCC 223
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 149/214 (69%), Gaps = 10/214 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF +EF +SKSTIGVEF T+ +D++GK++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL+EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR-KVMISQELK 190
R V T E K A L F ETSAL+S NV AF+ ++T I+ +S+ +V +S
Sbjct: 131 AHLRAVPTEEAKQFASENQLLFTETSALNSDNVDLAFKELITAIHQKVSKHQVELSN--A 188
Query: 191 QKDSSSFNGKTVVL---EGEKKEADAEPKKAGCC 221
K + NG T+ L EKK++ + CC
Sbjct: 189 NKPGAGPNGPTISLTPAPNEKKKSSSN----NCC 218
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 138/182 (75%), Gaps = 2/182 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
SE++ DY+FKVV++GDSAVGK+ LLARF RDEF +SKSTIGVEFQT+ + ++ K VK
Sbjct: 24 SEKEAEIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVK 83
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSD-MNVVTI 123
AQIWDTAGQER+RAVTSAYYRGA+GA++VYD++RR TF+ + RW+ EL H+D + V
Sbjct: 84 AQIWDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVA 143
Query: 124 LVGNKSDLKDA-REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
L+GNK+D+ REV E LAE QGLFF E SAL NV AF T++ E++ ++SR+
Sbjct: 144 LIGNKADMPAGRREVAADEAARLAEEQGLFFSEASALTGDNVERAFLTLLEEVFAVVSRR 203
Query: 183 VM 184
+
Sbjct: 204 AL 205
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 142/210 (67%), Gaps = 4/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YL+K+VLIGD VGKSNLL+RF RDEF S+STIGVEF T+ ++I+G+ VKAQIWDTA
Sbjct: 13 EYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDI + ++++S+ RWL EL H+D N+V LVGNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTNIVIELVGNKSDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A L F E SAL S NV +F ++ IY ++S+ + + +
Sbjct: 133 DHLRAVPTEEAKLFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQGA 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ S G T+ L +E + + CC
Sbjct: 193 QKPS---GPTISLTPAPQEKKGK-NNSNCC 218
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/223 (48%), Positives = 152/223 (68%), Gaps = 11/223 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M +EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + +
Sbjct: 1 MGNRAEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGT 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+KAQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +
Sbjct: 59 AAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL +REV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 119 VVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
KQ+ +++ + G + +K CC S
Sbjct: 179 ---------KQRQNNARTNAVTLGSGPAGQELGPGEKRACCIS 212
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 149/218 (68%), Gaps = 11/218 (5%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKA
Sbjct: 6 EEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ T+ + RWL EL+ H++ +V +LV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVMLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVS----- 178
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
KQ+ +S+ + + + +K CC S
Sbjct: 179 ----KQRQNSTRTNAITLGSAQGGQEPGSGEKRACCIS 212
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 139/178 (78%), Gaps = 2/178 (1%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKA
Sbjct: 6 EEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
GNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S+++
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQI 181
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 147/198 (74%)
Query: 11 EDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDT 70
EDY+FKVV+IGDSAVGK+ LL RF +DEF+ +SKSTIG+EFQT+ ++I GK VKAQIWDT
Sbjct: 4 EDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDT 63
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RAVTSAYYRGA+GA+LVYD++ R++F RWL++L H+D ++V +L+GNK+D
Sbjct: 64 AGQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNKAD 123
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
L AR V E A AE QGLFF E SAL NV AF ++ EI+ I+SR+ ++ +
Sbjct: 124 LSHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSLLEMDGI 183
Query: 191 QKDSSSFNGKTVVLEGEK 208
D+++ ++L G K
Sbjct: 184 NGDAAANANAALMLRGTK 201
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 151/221 (68%), Gaps = 11/221 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M +EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + +
Sbjct: 1 MGNRAEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGT 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+KAQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +
Sbjct: 59 AAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL +REV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 119 VVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLREIFAKVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
KQ+ +++ + G + +K CC
Sbjct: 179 ---------KQRQNNARTNAITLGSGPTGQELGPGEKRACC 210
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 145/211 (68%), Gaps = 5/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF DEF NSKSTIGVEF T+ +++ GK+VKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADENVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR-KVMISQELK 190
R V T E K A+ + F ETSAL++ NV AF+ ++T IY ++S+ +V +S+ K
Sbjct: 131 AHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSE--K 188
Query: 191 QKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ G T+ L E K CC
Sbjct: 189 SGGGTMPRGPTISLTPASNE--KTKKSNNCC 217
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 147/223 (65%), Gaps = 7/223 (3%)
Query: 5 SEEDRAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
S ED DY LFK+VLIGDS VGKSNLL+RF ++EF +SKSTIGVEF T+ ++I+GK
Sbjct: 2 SSEDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKR 61
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL+EL ++D NV
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAV 121
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
L+GNKSDL R V T E K A+ L F ETSAL+S NV AF+ ++ IY +S+
Sbjct: 122 GLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDEAFEELINTIYQKVSKH 181
Query: 183 VM----ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
M S +S+ NG T+ L E + CC
Sbjct: 182 QMDLGDSSTNGNVNGASAPNGPTISLTPTPNE-NKNGSGNNCC 223
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 148/214 (69%), Gaps = 9/214 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D A +++FKVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + + +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLIIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDI++ T++S+ RWL EL+ H+D ++V +LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DL R V E K AE GL F+ETSAL+S+NV AFQ V+ EI+ RKV +
Sbjct: 124 KTDLGSERSVPNEEAKDFAEKNGLLFLETSALESTNVETAFQNVLGEIH----RKVSSKK 179
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
L+ S + ++ + D E KK CC
Sbjct: 180 VLR----GSISAVSLASPVPRAAGDPEEKKP-CC 208
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 139/178 (78%), Gaps = 2/178 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VK
Sbjct: 5 TEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
VGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S++
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 153/222 (68%), Gaps = 10/222 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + +
Sbjct: 1 MGNRKEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGT 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
VKAQIWDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +
Sbjct: 59 AAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 119 VVMLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ ++++S N T+ +E K+A C S
Sbjct: 179 K--------QRQNSIRTNAITLGSAQAGQELGPGEKRACCIS 212
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDT 70
DYLFK+VLIGDS VGKSNLL+RF RDEF SKSTIGVEF T+ + + N K +KAQIWDT
Sbjct: 5 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 64
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RA+TSAYYRGAVGALLVYDI+++ +F++I +WL EL ++D N+V +LVGNKSD
Sbjct: 65 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 124
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
LK R + + A+ + L F+ETSAL+++NV AF ++ EIYN+ +K
Sbjct: 125 LKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK 176
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 155/227 (68%), Gaps = 14/227 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDS 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ +
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQH 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
+LVGNK+DL+ V+T +GK+ AE + L+FMETSAL+++NV +F V+T+IY ILS
Sbjct: 120 CCVLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILS 179
Query: 181 RKVMISQELKQKDSSSFNGK-TVVLEGEK---KEADAEPKKAGCCSS 223
+K + E NG +V +GEK K + K+ GCCSS
Sbjct: 180 KKAVEGAE---------NGNASVPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 131/178 (73%), Gaps = 2/178 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED DYLFKVVLIGDS VGKSN+L+RF R EF S+STIGVEF T+ + I K VK
Sbjct: 8 AEEDY--DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVK 65
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDIS+R +F++ RWL EL H+D ++V +L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVML 125
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
VGNK DL R V E K L F+ETSAL+++NV AFQ ++ +IY + S K
Sbjct: 126 VGNKCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSK 183
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 131/178 (73%), Gaps = 2/178 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED DYLFKVVLIGDS VGKSN+L+RF R EF S+STIGVEF T+ + I K VK
Sbjct: 8 AEEDY--DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVK 65
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDIS+R +F++ RWL EL H+D ++V +L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVML 125
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
VGNK DL R V E K L F+ETSAL+++NV AFQ ++ +IY + S K
Sbjct: 126 VGNKCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSK 183
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 145/197 (73%), Gaps = 1/197 (0%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
E D + DYLFK+VL+GDS VGKSNLL+RF R+EF SKSTIGVEF T+ +++ K +KA
Sbjct: 4 ETDDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKIIKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++ T+D+I +WL+EL H+D ++V +LV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIVIMLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK DL+ R A + AE +GL F+ETSAL+++NV AF + +Y+++S K+ +
Sbjct: 124 GNKCDLEHLRVTEAATAQQFAEKEGLMFIETSALNATNVEHAFIDSLGRVYDVVS-KLKM 182
Query: 186 SQELKQKDSSSFNGKTV 202
+ Q ++S +TV
Sbjct: 183 ACTPSQSAAASLVCRTV 199
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
Query: 10 AEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
+EDY +FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQI
Sbjct: 19 SEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 78
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGN
Sbjct: 79 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 138
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
KSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S++
Sbjct: 139 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 193
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/213 (51%), Positives = 146/213 (68%), Gaps = 11/213 (5%)
Query: 11 EDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIW 68
EDY +FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIW
Sbjct: 7 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 66
Query: 69 DTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNK 128
DTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGNK
Sbjct: 67 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 126
Query: 129 SDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQE 188
SDL AREV T E AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 127 SDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS-------- 178
Query: 189 LKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
KQ+ +S+ + + + +K CC
Sbjct: 179 -KQRQNSTRTSAITLGSAQAGQDPGPGEKRACC 210
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 137/175 (78%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D A +++FKVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + ++ +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDI++ T++S+ RWL EL+ H+D ++V +LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
K+DL R V T E K A+A GL FMETSAL+S+NV +AF V+T I+ ++ K
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASK 178
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/174 (59%), Positives = 136/174 (78%), Gaps = 2/174 (1%)
Query: 11 EDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIW 68
EDY +FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIW
Sbjct: 5 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 64
Query: 69 DTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNK 128
DTAG ER+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGNK
Sbjct: 65 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 124
Query: 129 SDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
SDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S++
Sbjct: 125 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 135/172 (78%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+L+K+VL+G+S VGKSNLL RF R+EF P+ +STIGVEF T+ ++ K ++AQIWDTA
Sbjct: 8 DFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGA+GAL+VYDI+++ +F+S+ +WL ELH ++D VV +++GNK DL
Sbjct: 68 GQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNKCDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
REV T+EG+ LA+ FF ETSALD SNV AF T++ +IY+ S+ V
Sbjct: 128 NQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKSV 179
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 135/172 (78%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+L+K+VL+G+S VGKSNLL RF R+EF P+ +STIGVEF T+ ++ K ++AQIWDTA
Sbjct: 8 DFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGA+GAL+VYDI+++ +F+S+ +WL ELH ++D VV +++GNK DL
Sbjct: 68 GQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNKCDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
REV T+EG+ LA+ FF ETSALD SNV AF T++ +IY+ S+ V
Sbjct: 128 SQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKSV 179
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 151/211 (71%), Gaps = 11/211 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+++FKVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + + +KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFIIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G ER+RA+TSAYYRGAVGALLVYDIS+ T++S RWL EL+ H+D ++V +LVGNKSDL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E + A+ +GL FMETSALDS+NV +AF V+T I+ K + S+E+ +
Sbjct: 128 QSQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAIH-----KKVASREVTR 182
Query: 192 KDSSSFN-GKTVVLEGEKKEADAEPKKAGCC 221
S+ + L E++E ++ GCC
Sbjct: 183 GSISAVTLSGPIGLNSEQQE-----ERKGCC 208
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF +EF SKSTIGVEF T+ +++ GK++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ T+++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM-----IS 186
R V T E K A+ L F ETSAL+S NV AF+ ++T IY ++S+ +
Sbjct: 131 AHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLDNSNG 190
Query: 187 QELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
Q + + G T+ L E + + CC
Sbjct: 191 QGAAGAGNGAPRGPTISLTPTPNEKSKKNSSSNCC 225
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 149/212 (70%), Gaps = 8/212 (3%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDTA 71
+ + VVLIGDS VGKSNLL+RF RDEF SKSTIGVEF T+ + + N K +KAQIWDTA
Sbjct: 3 FFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTA 62
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++ TF++I +WL EL ++D N+V +LVGNKSDL
Sbjct: 63 GQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDL 122
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R + + A+ + L F+ETSAL+++NV AF ++ EIYN+ +K Q K
Sbjct: 123 KHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK----QATKS 178
Query: 192 KDSSSFN--GKTVVLEGEKKEADAEPKKAGCC 221
+D+ + GK + ++ + E D + K CC
Sbjct: 179 EDNVNIQPRGKKINVDNDNDE-DEKKTKTKCC 209
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 151/214 (70%), Gaps = 10/214 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D A +++FKVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + ++ +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDI++ T++S+ RWL EL+ H+D ++V +LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DL R V T E K A+A GL FMETSAL+S+NV +AF V+T I+ +KV +
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIH----QKVASKE 179
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ S+ G+T G +E + GCC
Sbjct: 180 VTRGSISAVTLGQT---HGPSREFQ---ESRGCC 207
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 142/210 (67%), Gaps = 1/210 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF +EF SKSTIGVEF T+ +++ GK++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ T+++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A L F ETSAL+S NV AF+ ++T IY ++S+ + +
Sbjct: 131 AHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDSNT 190
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+++ G T+ L E + + CC
Sbjct: 191 SGATAPKGPTISLTPAPNE-NKKSSSNNCC 219
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 137/177 (77%), Gaps = 3/177 (1%)
Query: 11 EDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDT 70
EDY+FK+V++GDSAVGK+ LL RF RDEF+ +SKSTIG+EFQT+ +DI VKAQIWDT
Sbjct: 3 EDYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDT 62
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RAVTSAYYRGA+GA+LVYD++ R+TFD RW+ EL H+D ++V +LVGNK+D
Sbjct: 63 AGQERYRAVTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKAD 122
Query: 131 L-KDA--REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
L +DA R V E A AE QGLFF E SAL NV AF T++ EI+ I+SRK +
Sbjct: 123 LARDAGRRAVDADEAAAFAEEQGLFFSEASALSGDNVERAFLTLLREIHAIVSRKTL 179
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 139/195 (71%), Gaps = 6/195 (3%)
Query: 28 SNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGA 87
SNLL+RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQER+RA+TSAYYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 88 VGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAE 147
VGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL+ R V T E K+ A
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKSFAS 127
Query: 148 AQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFNGKTVVLEGE 207
L F+ETSALD+SNV AFQ ++TEIY I+S K + S + Q + G + L
Sbjct: 128 ENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQATIGA--GTNISL--- 182
Query: 208 KKEADAEPKKAG-CC 221
K AD + K G CC
Sbjct: 183 SKPADDDAAKGGKCC 197
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 129/166 (77%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D + + VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQI
Sbjct: 48 DSCKSWHGAVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 107
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 108 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 167
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVT 173
KSDL+ R V T E +A AE L F+ETSALDS+NV AF+ ++T
Sbjct: 168 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 213
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 143/207 (69%), Gaps = 9/207 (4%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIWDTAG ER+
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGNKSDL+ ARE
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S KQ+ +SS
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVS---------KQRQNSS 171
Query: 197 FNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + + +K CC S
Sbjct: 172 RTNAITLGSAQAGQEPGPGEKRACCIS 198
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 142/195 (72%), Gaps = 8/195 (4%)
Query: 29 NLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAV 88
NLL+RF R+EF SKSTIGVEF T+ ++++GK VKAQIWDTAGQER+RA+TSAYYRGAV
Sbjct: 17 NLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAV 76
Query: 89 GALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEA 148
GALLVYDI++ QT++++ RWL EL H+D N+V +LVGNKSDLK R V+T E K A
Sbjct: 77 GALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVSTDEAKQFATE 136
Query: 149 QGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFNGKTVVLEGEK 208
GL F+ETSALD+SNV +AFQ ++T+IY I+S K + S K S G+T+++
Sbjct: 137 NGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKPS---GGETILV---A 190
Query: 209 KEADAEPKKAG--CC 221
AD K+G CC
Sbjct: 191 PTADDGGAKSGSKCC 205
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 143/206 (69%), Gaps = 6/206 (2%)
Query: 5 SEEDRAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
S ED DY LFK+VLIGDS VGKSNLL+RF ++EF +SKSTIGVEF T+ ++I+GK
Sbjct: 2 SSEDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKR 61
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL+EL ++D NV
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAV 121
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
L+GNKSDL R V T E K A+ L F ETSAL+S NV AF+ ++ IY +S+
Sbjct: 122 GLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKH 181
Query: 183 VM----ISQELKQKDSSSFNGKTVVL 204
M S +S+ NG T+ L
Sbjct: 182 QMDLGDSSTNGNVNGASAPNGPTISL 207
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 149/210 (70%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+L+K+VL+G+S VGKSNLL RF R+EF P+ +STIGVEF T+ ++ K ++AQIWDTA
Sbjct: 8 DFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGA+GAL+VYDI+++ +F+S+ +WL ELH ++D VV +++GNK DL
Sbjct: 68 GQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNKCDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
REV T EG+ LA+ FF ETSALD SNV AF T++ +IY+ S+ V + +Q
Sbjct: 128 SQTREVQTTEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKSV----DGEQ 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+++ T ++ + E KK CC
Sbjct: 184 SNTNEIKPATEPIDLGSQNNKPEEKK--CC 211
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 144/208 (69%), Gaps = 11/208 (5%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + +KAQIWDTAG ER+
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLV+D+++ QT+ RWL EL+ H++ +V +LVGNKSDL+ ARE
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E + AE GL F+ETSALDS+NV AFQTV+ EI +S KQ+ SSS
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEILTKVS---------KQRQSSS 171
Query: 197 FNGKTVVLEGEKKEADAEP-KKAGCCSS 223
+ L G + + P +K CC S
Sbjct: 172 -RTNAITLGGAQAGQEQGPGEKRACCIS 198
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 126/157 (80%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVT 173
V T E +A AE L F+ETSALDS+NV AF+ ++T
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 157
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D A +++FKVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + +N +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDI++ T++S+ RWL EL H+D ++V +LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY-NILSRKVM 184
K+DL+ R V + E K A+ GL F+ETSAL+S+NV AAF V+ EI+ + SR+V+
Sbjct: 124 KTDLESERSVPSEEAKDFADKNGLMFLETSALESTNVEAAFNGVLAEIHRKVSSREVL 181
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 145/216 (67%), Gaps = 9/216 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF ++F SKSTIGVEF T+ +++ K++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS++ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K A+ L F ETSAL+S NV AF+ ++T IY ++S+ + +L
Sbjct: 131 SHLRAVPTEEAKNFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQV---DLGS 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKA------GCC 221
++ S NG + ++G P + CC
Sbjct: 188 DNNGSGNGASNNIKGPTISLTPTPNEKTKSSSNNCC 223
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 145/209 (69%), Gaps = 4/209 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYL+KVV+IGDS VGKSNLL RF RDEF P KSTIGVEF ++++ N + V+ QIWDTA
Sbjct: 7 DYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGA+GA+LVYD++++ +F+S+ RWL+EL ++D VV ++VGNK DL
Sbjct: 67 GQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNKCDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ REVT EG+ +A+ G FF ETSALD NV AF ++ +I + +R + + E K
Sbjct: 127 EQMREVTIKEGEDMAKKIGAFFFETSALDGKNVETAFMAIIQKICDEQTR--LRASETKP 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGC 220
+ K + + E PKK GC
Sbjct: 185 VIKPISDSKVDI--DKTPEEQQTPKKNGC 211
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 131/170 (77%), Gaps = 5/170 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVL+GDS VGKSNLL+RF R+ F +SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 18 DYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTA 77
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSD-MNVVTILVGNKSD 130
GQER+RAVTSAYYRGAVGALLVYD+++ TF + RWL EL H+D +LVGNK+D
Sbjct: 78 GQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDHADGRGTAVMLVGNKTD 137
Query: 131 LKDA----REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
L R V +G ALAE +GL F+ETSALD++NV AAF T++TEIY
Sbjct: 138 LAKQRGGLRAVPRGDGAALAEREGLSFVETSALDATNVDAAFVTLLTEIY 187
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 142/210 (67%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF +EF SKSTIGVEF T+ + + K++KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVEDKKIKAQIWDTA 71
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ T+++ WL EL ++D NV L+GNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENADDNVAIGLIGNKSDL 131
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E + A LFF ETSAL+S NV AF+ ++ +IY ++++ + E +
Sbjct: 132 EHLRAVPTEEARGFASENQLFFTETSALNSENVDLAFRELIEQIYKMVNKHQVDLGENAK 191
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S + G T+ L E + K CC
Sbjct: 192 GSSGAPKGPTISLAPVPGEKKKKSKSNSCC 221
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 144/210 (68%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D L+KVV+IGDS VGKSNL+ RF +++F ++K TIGVEF + ++ +G +K QIWDTA
Sbjct: 4 DVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWDTA 63
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFRA+++AYYRGA GAL+VYDI+ +++FD++ +W E+ + + ILVGNK DL
Sbjct: 64 GQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVGNKCDL 123
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R+V TA G+A AE + FMETSALDS+NV AF T++ EIY SRK +E ++
Sbjct: 124 NHLRQVETATGRAFAEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKSKKPEEDRK 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + K ++ +GE + +P + G C
Sbjct: 184 DEPIGPSDKVIIDDGEGDKPKPKPAQGGGC 213
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 136/182 (74%), Gaps = 1/182 (0%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R++F +KSTIGVEF T+ M I GK++KA I
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI-LVG 126
WDTAGQER+RA+TSAYYRG +GAL+VYDI++ QTF++I RWL EL H+D ++I LVG
Sbjct: 66 WDTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDISIMLVG 125
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NK+DL+ R V T E AE + F+ETSALDS+NV A + ++T IY +S K ++
Sbjct: 126 NKTDLRHLRAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTAIYKSVSTKYGVN 185
Query: 187 QE 188
++
Sbjct: 186 EK 187
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 129/170 (75%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF +EF SKSTIGVEF T+ +++ GK++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADANVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
R V T E K A+ L F ETSAL SSNV AF+ ++T IY ++S+
Sbjct: 131 DHMRAVPTDEAKNFAQENQLLFTETSALQSSNVDQAFRELITAIYQMVSK 180
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 142/208 (68%), Gaps = 9/208 (4%)
Query: 16 KVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQER 75
+VVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIWDTAG ER
Sbjct: 36 RVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 95
Query: 76 FRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAR 135
+RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGNKSDL AR
Sbjct: 96 YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 155
Query: 136 EVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSS 195
EV T E AE GL F+ETSALDS+NV AFQTV+ EI+ +S KQK +S
Sbjct: 156 EVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVS---------KQKQNS 206
Query: 196 SFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + + + +K CC S
Sbjct: 207 TRTSAITLGNAQAGQDPGPGEKRACCIS 234
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 141/210 (67%), Gaps = 9/210 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+L+K+VLIG+S VGKSNLL RF R+EF +STIGVEF T+ + GK ++AQIWDTA
Sbjct: 31 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 90
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGAL+VYDI++ TF SI RWL+EL ++D +V +++GNK+DL
Sbjct: 91 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 150
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
RE+ A K + Q LFF ETSALD +NV AF++++ EI+ + V E
Sbjct: 151 AQTREIEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASTV----EETS 206
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
D + V +E KE+ K GCC
Sbjct: 207 NDKPAEKPDVVAIEPSPKES-----KGGCC 231
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 149/212 (70%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYL+K+VLIGDS VGKS+LL+RF R+EF SKSTIGVEF T+ + + GK +KAQ+WDTA
Sbjct: 10 DYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGA+LVYD+++++TF + RWL E+ H+D +V +LVGNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R V + + K + GL F+E SALD++NV AFQ +T+++++ K + +EL
Sbjct: 130 KHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITKLHHVQLAK--MKKELDG 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKA-GCCS 222
KD+ G+T + + +P + CC+
Sbjct: 188 KDTR--EGQTAASKQQNSVDLNKPSQGKNCCT 217
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 145/209 (69%), Gaps = 4/209 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYL+KVV+IGDS VGKSNLL RF RDEF P KSTIGVEF ++++ N + V+ QIWDTA
Sbjct: 7 DYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGA+GA+LVYD++++ +F+S+ RWL+EL ++D VV ++VGNK DL
Sbjct: 67 GQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNKCDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ REV+ EG+ +A+ G FF ETSA D NV AF ++ +I + +R + + E K
Sbjct: 127 EQMREVSIKEGEDMAKKIGAFFFETSAFDGKNVETAFMAIIQKICDEQTR--LRASETKP 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGC 220
+ K + + E PKK+GC
Sbjct: 185 VIKPISDSKVEI--DKTPEEQQTPKKSGC 211
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 140/210 (66%), Gaps = 9/210 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+L+K+VLIG+S VGKSNLL RF R+EF +STIGVEF T+ + GK ++AQIWDTA
Sbjct: 7 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGAL+VYDI++ TF SI RWL+EL ++D +V +++GNK+DL
Sbjct: 67 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
REV A K + Q LFF ETSALD +NV AF++++ EI+ + V E
Sbjct: 127 AQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAV----EESS 182
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
D + V +E KE K GCC
Sbjct: 183 NDKPTEKPDVVPIEPSPKE-----NKGGCC 207
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 143/216 (66%), Gaps = 11/216 (5%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
EED D+L+K+VLIG+S VGKSNLL RF R+EF +STIGVEF T+ + GK ++A
Sbjct: 2 EEDY--DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRA 59
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+T+AYYRGAVGAL+VYDI++ TF SI RWL+EL ++D +V +++
Sbjct: 60 QIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMII 119
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DL REV A K + Q LFF ETSALD +NV AF++++ EI+ + V
Sbjct: 120 GNKADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAV-- 177
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
E D + V +E KE K GCC
Sbjct: 178 --EESSNDKPAEKPDVVPIEPSPKE-----NKGGCC 206
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+EED DYLFKVVLIGDS VGKSN+L+RF R EF S+STIGVEF T+ + I K VK
Sbjct: 8 AEEDY--DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVK 65
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDIS+R +F++ RWL EL H+D ++V +L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVML 125
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
VGNK DL R V E K L F+ETSAL+++NV AFQ ++ +IY
Sbjct: 126 VGNKCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIY 177
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 140/210 (66%), Gaps = 9/210 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+L+K+VLIG+S VGKSNLL RF R+EF +STIGVEF T+ + GK ++AQIWDTA
Sbjct: 7 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGAL+VYDI++ TF SI RWL+EL ++D +V +++GNK+DL
Sbjct: 67 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
REV A K + Q LFF ETSALD +NV AF++++ EI+ + V E
Sbjct: 127 AQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAV----EESS 182
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
D + V +E KE K GCC
Sbjct: 183 NDKPAEKPDVVPIEPSPKE-----NKGGCC 207
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 141/206 (68%), Gaps = 6/206 (2%)
Query: 5 SEEDRAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
S ED DY LFK+VLIGDS VGKSNLL+RF ++EF +SKSTIGVEF T+ ++I+GK
Sbjct: 2 SSEDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKR 61
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL+EL ++D NV
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAV 121
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
L+GNKSDL R V T E K A L F ETSAL+S NV AF+ ++ IY +S+
Sbjct: 122 GLIGNKSDLAHLRAVPTEESKTFALENQLLFTETSALNSENVDKAFEELINTIYQKVSKH 181
Query: 183 VM----ISQELKQKDSSSFNGKTVVL 204
M + S+ NG T+ L
Sbjct: 182 QMDLGDSAANGNANGMSALNGPTISL 207
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 141/211 (66%), Gaps = 3/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK VL GDS VGKSNLL+RF+++EF +S+ TIGVEF + + + K VK QIWDTA
Sbjct: 10 DYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFRA+TS+YYRGA+GALLVYDI+R TFD+I +WL EL + +V ILVGNK DL
Sbjct: 70 GQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+REV E + LAE + LFFMETSA D+ NV AF +V I+ I S+K + + +
Sbjct: 130 HQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFE 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
K + NGK ++ E + CCS
Sbjct: 190 KLVAFPNGKEII---SIHEVTPTKHNSNCCS 217
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 128/167 (76%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
L VVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VKAQIWDTAGQ
Sbjct: 17 LHPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQ 76
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
ER+RA+TSAYYRGAVGALLVYDI++ T+++ RWL EL H+D N++ +LVGNKSDL+
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLRH 136
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
R V T E ++ AE GL F+ETSALDS+NV AF +++ IL+
Sbjct: 137 LRAVPTDEARSFAEKNGLSFLETSALDSTNVEMAFHNILSAPNLILT 183
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 136/175 (77%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D A +++FKVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + ++ +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDI++ T++S+ RWL EL+ H+D ++V +LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
K+DL R V T E K A+A L FMETSAL+S+NV +AF V+T I+ ++ K
Sbjct: 124 KNDLATVRTVPTEEAKDFADANDLLFMETSALESTNVESAFLEVLTAIHQKVASK 178
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 148/211 (70%), Gaps = 5/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK VLIGDS VGKSNLL+RFA+DEF +SK TIGVEF + + + K +KAQIWDTA
Sbjct: 13 DYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTA 72
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFRA+TS+YYRGA+GALLVYDI+RR +++S+GRWL EL +V ILVGNK DL
Sbjct: 73 GQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGNKCDL 132
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++REV E K AEA+GL FMETSAL + NV F ++T I++I +++ + ++ +
Sbjct: 133 GESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSL-DAKMDE 191
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ NGK + + E K+A CCS
Sbjct: 192 TPINLSNGKEIHIADEV----TATKQAPCCS 218
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 147/221 (66%), Gaps = 12/221 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+R+ ++EF+ SK+TIGVE + ++I GK V+AQIWDTA
Sbjct: 16 DYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGA+GA+LVYDI++ +F ++ +W+ EL H+ ++ IL+GNKSDL
Sbjct: 76 GQERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDL 135
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R + GK A G+ FMETSALDS+NV AF+ + I++ + + + E
Sbjct: 136 KHLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNEL---EKSG 192
Query: 192 KDSSSFNGKTVVLEGEKKEADAEP---------KKAGCCSS 223
+ NG+++V++ E E A P + CC +
Sbjct: 193 QAHEKPNGESIVIKAELAELPATPNGKEHARTRQSKSCCGT 233
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 153/217 (70%), Gaps = 8/217 (3%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
YSE++ DYL KVVL GDS VGK+NLL+RF R+EF S+STIGVEF T+ + I+GK +
Sbjct: 23 YSEDEY--DYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTL 80
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQ+R+RA+T+AYYR AVG + VYDI++R TFD++ +WL E +D +V+ +
Sbjct: 81 KAQIWDTAGQDRYRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILM 140
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNK+DL+ R V++ E ++ AE + ++ETSALD ++V AFQ+++ EIY+ +S+K
Sbjct: 141 LVGNKTDLRHLRAVSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYSTISQKG 200
Query: 184 MISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGC 220
+ + D+ FN +VV + + E K+ C
Sbjct: 201 L------KDDTGGFNLPSVVDSMDIGITETEEKRKCC 231
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 136/183 (74%), Gaps = 4/183 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYD+++ TF+ + WL EL H+D N+V +L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVIMLIGN 123
Query: 128 KSDLKDAREVTTAEGKA-LAEAQGLFFMETSALDSSNVTAAFQTVVT-EIYNILSRKVMI 185
K+DLK +R V T + + + + L F+ETSAL ++NV AFQT++ I+S+K +
Sbjct: 124 KTDLKHSRAVRTEDAQGFMLRKKALSFIETSALKATNVEKAFQTILCLRFTGIISKKSLS 183
Query: 186 SQE 188
S E
Sbjct: 184 SDE 186
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 142/213 (66%), Gaps = 4/213 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF DEF SKSTIGVEF T+ +++ K++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK---VMISQE 188
R V T E K A + F ETSAL+S NV AF+ ++ I+ ++S+ + S
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGT 190
Query: 189 LKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + G T+ L KE D + K + CC
Sbjct: 191 NNMGSNGAPKGPTISLTPAPKE-DKKKKSSNCC 222
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 129/170 (75%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF +EF SKSTIGVEF T+ +++ GK++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ T+++ WL+EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
R V T E K A L F ETSAL+S NV AF+ ++T IY ++S+
Sbjct: 131 AHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSK 180
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 144/210 (68%), Gaps = 3/210 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
+YLFK+VLIGDS VGKSNLL+RF R+EF S+STIGVEF T+ ++I+GK VKAQIWDTA
Sbjct: 12 EYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKAQIWDTA 71
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDIS+ ++++++ +WL EL ++D N+V LVGNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIELVGNKSDL 131
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E K + L F E SAL++ NV +FQ ++ I++++S+ +
Sbjct: 132 DHLRAVPTDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKSIHDMVSKHQFDMTDYSG 191
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S G T+ L ++ K+ CC
Sbjct: 192 PKPSG--GPTISLTPTPGNEQSK-NKSNCC 218
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 146/216 (67%), Gaps = 14/216 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF ++F SKSTIGVEF T+ +++ GK++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR-KVMISQELK 190
R V T E K A+ L F ETSAL S NV AF+ ++T IY ++S+ +V +
Sbjct: 131 DHLRAVPTDEAKNFAQENQLLFTETSALKSENVDLAFRELITAIYQMVSKHQVDLGDANT 190
Query: 191 QKDSSSFNGKTVVL-----EGEKKEADAEPKKAGCC 221
Q ++ G T+ L E +KK A+ CC
Sbjct: 191 QGNAPK--GPTISLTPAPNENKKKSAN------NCC 218
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/213 (51%), Positives = 141/213 (66%), Gaps = 10/213 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGK+NLL RF R+EF SKSTIGVEF T+ + ++ K +KAQIWDT
Sbjct: 6 DYLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKVIKAQIWDTG 65
Query: 72 GQ--ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
+ +YYRGAVGALL YDIS+ TF+S+ RWL EL H+D N+V +LVGNKS
Sbjct: 66 NYFISTSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNIVIMLVGNKS 125
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 189
DL+ R V T E K A GL F+ETSALD++NV +FQ ++TEI+ I+S K + E
Sbjct: 126 DLRHLRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILTEIHRIVSNKAL---ET 182
Query: 190 KQKDSSSFNGKTVVLEGEKKEADAEPKKA-GCC 221
G+T+++ ++ EPK + GCC
Sbjct: 183 SNNAIKPTGGQTILVS----QSPDEPKPSGGCC 211
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 143/218 (65%), Gaps = 14/218 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF DEF SKSTIGVEF T+ +++ K++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E + A + F ETSAL+S NV AF+ ++ I+ ++S+ ++
Sbjct: 131 AHLRAVPTDEARNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSK-----HQVDL 185
Query: 192 KDSSSFN--------GKTVVLEGEKKEADAEPKKAGCC 221
S S N G T+ L KE D + K + CC
Sbjct: 186 NGSGSNNVGSNGGPKGPTISLTPAPKE-DKKKKSSNCC 222
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 134/176 (76%), Gaps = 3/176 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ LL+RF ++EF +SKSTIGVEFQT+ + + GK VKAQIWDTA
Sbjct: 26 DYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQGKLVKAQIWDTA 85
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA++VYDI++R +FD + RW+ EL H+D + V +LVGNK+DL
Sbjct: 86 GQERYRAVTSAYYRGALGAMVVYDITKRVSFDHVARWVEELRAHADDSAVIMLVGNKADL 145
Query: 132 K-DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYN--ILSRKVM 184
D R V T + AE Q LFF E SAL NV AF ++ EI++ ++SRK M
Sbjct: 146 AVDKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAM 201
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 125/165 (75%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYL+K+VLIG+S VGKSNLL RF R+EF P +STIGVEF T+ + K ++AQIWDTA
Sbjct: 7 DYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRAQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGAL+VYDI++ +F SI RWL+EL ++D +V ++VGNK+DL
Sbjct: 67 GQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVVGNKADL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV + K E Q LFF ETSALD +NV AF+ ++ EIY
Sbjct: 127 SQTREVDESTAKTFCENQKLFFFETSALDGTNVETAFKNLLIEIY 171
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 142/207 (68%), Gaps = 9/207 (4%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + +KAQIWDTAG ER+
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGNKSDL +RE
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSRE 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S KQ+ +++
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS---------KQRQNNA 171
Query: 197 FNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ G + +K CC S
Sbjct: 172 RTNAVTLGSGPAGQELGPGEKRACCIS 198
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 142/213 (66%), Gaps = 4/213 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF DEF SKSTIGVEF T+ +++ K++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK---VMISQE 188
R V T E K A + F +TSAL+S NV AF+ ++ I+ ++S+ + S
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGT 190
Query: 189 LKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + G T+ L KE D + K + CC
Sbjct: 191 NNMGSNGAPKGPTISLTPAPKE-DKKKKSSNCC 222
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 143/219 (65%), Gaps = 9/219 (4%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+ D DYLFKVVL+GDS VGKSNLL+RF R+ F +KSTIGVEF T+ M I GK++K
Sbjct: 3 NPRDEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSD-MNVVTI 123
A IWDTAGQER+RA+T AYYRGA+G L+VYDI++ QTF +I +WL EL H+D N+ +
Sbjct: 63 ATIWDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIM 122
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
LVGNK+DL+ R V T E A+ + F+ETSALDS+NV A + ++T+IY +S K
Sbjct: 123 LVGNKTDLRHLRAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLTDIYKTVSTKY 182
Query: 184 MISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ + + G ++ D + K CC+
Sbjct: 183 GVDSK-----PVPYGGLGTIMTNVPSTEDVKKK---CCN 213
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 141/215 (65%), Gaps = 18/215 (8%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
LFK+VLIGDS VGK+NL +RF EF SKSTIGV+F T+ + I+GK VKAQIWDTAGQ
Sbjct: 11 LFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVVKAQIWDTAGQ 70
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
ER+RA+TSAYYRGAVGALLVYDIS+ TF ++ RWL+EL ++ +VV +LVGNK DLK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIMLVGNKCDLKH 130
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKD 193
R V T + K AE QG+ FMETSAL++ NV AF + IYN++S++
Sbjct: 131 LRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSKR----------- 179
Query: 194 SSSFNG------KTVVLEGEKKEADAEPKKAGCCS 222
SFN T L E+ KK CC+
Sbjct: 180 -PSFNADEGNIIPTNNLPVEEPNLKETTKKKFCCT 213
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 144/208 (69%), Gaps = 4/208 (1%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
+LFKVVLIG S G+SNLL+RF R+EF +SKST G++F T+ + ++GK +KAQIWDTAG
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAG 60
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QER RA TSAYYR A+GALLV+DI++ T++++ RWL E H+D N+V +LV NKSDL
Sbjct: 61 QERCRATTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLVRNKSDLC 120
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 192
R V T E +A AE GL F+E+SAL +NV AAFQT++TEIY +S+K IS +
Sbjct: 121 HLRAVPTDEARAFAEKNGLPFIESSALHWTNVEAAFQTILTEIYRTVSQK-QISDRREND 179
Query: 193 DSSSFNGKTVVLEGEKKEADAEPKKAGC 220
S S N + + +++PK C
Sbjct: 180 MSPSSNMVPIHV---PPTTESKPKMQCC 204
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 143/210 (68%), Gaps = 1/210 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFK+VLIGDS VGKSNLL+RF +EF +SK+TIGVEF T+ +++ GK++KAQIWDTA
Sbjct: 11 DFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYR AVGAL+VYDI++ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
R V T E + A+ L F ETSAL++ NV AF+ ++T IY ++S+ + +
Sbjct: 131 DHKRAVPTDEARNYAQENQLLFTETSALNADNVDEAFRALITAIYQMISKNQLDLNDASG 190
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
++++ G T+ L E + CC
Sbjct: 191 NNANAPKGPTISLTPAPNEKHKKSTN-NCC 219
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 141/213 (66%), Gaps = 4/213 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF DEF SKSTIGVEF T+ +++ K++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK---VMISQE 188
R V T E K A + F TSAL+S NV AF+ ++ I+ ++S+ + S
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGT 190
Query: 189 LKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + G T+ L KE D + K + CC
Sbjct: 191 NNMGSNGAPKGPTISLTPAPKE-DKKKKSSNCC 222
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 139/215 (64%), Gaps = 8/215 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGK+N+L RF +EF SK TIGVEF T+ GK VK QI
Sbjct: 6 DEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSVKCQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+T+AYYRGAVGA + YDI+R TF + +WL+EL H+D N+V I++GN
Sbjct: 66 WDTAGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVIIMIGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K D D+R V T E + E+Q + F+ETSALD +N+ AF +V I+N + K +
Sbjct: 126 KIDAVDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFNTIGSKNI--- 182
Query: 188 ELKQKDSSSFNGKTVVLEGEK-KEADAEPKKAGCC 221
K + V+LE K ++ ++ + GCC
Sbjct: 183 ----KKVVQMATEQVLLEKPKVTQSKSKKNREGCC 213
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 123/156 (78%)
Query: 18 VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFR 77
VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K VKAQIWDTAGQER+R
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 60
Query: 78 AVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREV 137
A+TSAYYRGAVGALLVYDI++ T+++ RWL EL H+D N+V +LVGNKSDL+ R V
Sbjct: 61 AITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAV 120
Query: 138 TTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVT 173
T E ++ AE GL F+ETSALDS+NV AF +++
Sbjct: 121 PTDEARSFAERNGLSFLETSALDSTNVETAFHNILS 156
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV-KAQIWDT 70
DYLFKVV+IGDS VGKSNLL R+ + +F SK+TIGVEF T+ + K+V KAQIWDT
Sbjct: 11 DYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDKKVVKAQIWDT 70
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RA+T+AYYRGAVGALLVYD++ +F + WL EL ++D N+V +LVGNK+D
Sbjct: 71 AGQERYRAITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNIVILLVGNKTD 130
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
LKD REV E A A+ L F+ETSALD SNV AF ++ EIY ++S
Sbjct: 131 LKDKREVRKEEAAAYADQHSLAFIETSALDCSNVDLAFDRIINEIYKVIS 180
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 140/205 (68%), Gaps = 9/205 (4%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
+VLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIWDTAG ER+
Sbjct: 1 MVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGNKSDL ARE
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E AE GL F+ETSALDS+NV AF+TV+ EI+ +S KQ+ +S+
Sbjct: 121 VPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS---------KQRQNST 171
Query: 197 FNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + +K CC
Sbjct: 172 RTSAITLGSAQAGQDPGPGEKRACC 196
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 142/198 (71%), Gaps = 9/198 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ LL+RF +EF +SKSTIGVEFQT+ + + GK VKAQIWDTA
Sbjct: 26 DYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTA 85
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA++VYDI++R +FD + RW+ EL H+D + V +LVGNK+DL
Sbjct: 86 GQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNKADL 145
Query: 132 K-DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
R V T + AE Q LFF E SAL NV AF ++ EI++ +V++S++
Sbjct: 146 SVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFS----RVVVSRKAM 201
Query: 191 QKDSSSFNGKTVVLEGEK 208
+ D G TV L+G +
Sbjct: 202 ESD----GGATVKLDGSR 215
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/167 (59%), Positives = 132/167 (79%), Gaps = 2/167 (1%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D + ++++KVVLIG+S VGKSNLL+RF ++EF +S++TIGVEF T+ + +N VKAQI
Sbjct: 4 DDSYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTVKAQI 63
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAG ER+RA+TSAYYRGAVGALLVYDIS+ T++S RWL EL+ H+D ++V +LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGN 123
Query: 128 KSDLKDAREVTTAEGKAL--AEAQGLFFMETSALDSSNVTAAFQTVV 172
K DL++ R V + G L +EA+GL FMETSALDS+NV AAF V+
Sbjct: 124 KRDLENLRTVPSEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 148/224 (66%), Gaps = 18/224 (8%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDT 70
D+LFK+VLIGDS VGKSNLL+RF ++EF SK+TIGVEF T+ + NG+ VK QIWDT
Sbjct: 11 DFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENGQSVKVQIWDT 70
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RA+T+ YYRGAVGALLVYDI++ +TF+S+ RWL ELH +++ +V +LVGNK+D
Sbjct: 71 AGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAESGIVILLVGNKTD 130
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 190
L REV E A + L F+ETSAL SSNV AF ++ +I+ S ++++
Sbjct: 131 LHKLREVKREEAAEFASLKNLAFIETSALVSSNVDEAFDLLIQQIHKEASSRLIVP---- 186
Query: 191 QKDSSSFNGKTVVLEGEK------KEADAEPKKAG-------CC 221
KD + N ++ +E +K E + + K G CC
Sbjct: 187 DKDEQNKNQRSKSMEMKKGKGVQLHEQNQDNNKRGNSKVRGRCC 230
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 142/218 (65%), Gaps = 14/218 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF DEF SKSTIGVEF T+ +++ K++KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK---VMISQE 188
R V T E K A + F ETSAL+S NV AF+ ++ I+ ++S+ + S
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVAIFQMVSKHQVDLNGSGT 190
Query: 189 LKQKDSSSFNGKTVVL-----EGEKKEADAEPKKAGCC 221
+ G T+ L EG+KK K + CC
Sbjct: 191 NNGGSNGGPKGPTISLTPAPNEGKKK------KSSNCC 222
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 109/200 (54%), Positives = 143/200 (71%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK VLIGDS VGKSNLL+RFA+DEF +SK TIGVEF + + + K +KAQI
Sbjct: 8 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+TS+YYRGA+GALLVYDI+RR +++S+GRWL EL +V ILVGN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGN 127
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K DL ++REV E K AEA+GL FMETSAL + NV F ++T I++I +++ + ++
Sbjct: 128 KCDLGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAK 187
Query: 188 ELKQKDSSSFNGKTVVLEGE 207
+ + NGK + + E
Sbjct: 188 MDETPINHLSNGKEIHIADE 207
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDT 70
DYLFK+VLIGDS VGKSNLL+RF RDEF SKSTIGVEF T+ + + N K +KAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDT 68
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RA+TSAYYRGAVGALLVYDI+++ TF++I +WL EL ++D N+V +LVGNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVV 172
LK R + + A+ + L F+ETSAL+++NV AF ++
Sbjct: 129 LKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 131/177 (74%), Gaps = 4/177 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDS VGK+ LL RF R +F +SKSTIG+EFQT+ +DI + VKAQIWDTA
Sbjct: 5 DYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIWDTA 64
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYD++RR +F RW+ EL H+D ++V LVGNK+DL
Sbjct: 65 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVGNKADL 124
Query: 132 KDA----REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
A REV E +A AE QGLFF E SAL NV AAF ++ EI+ +SRK +
Sbjct: 125 ATAAPARREVRADEAEAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRKPL 181
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 142/217 (65%), Gaps = 5/217 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D D+LFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL+ R V T E +A A +T + + ++A F TEIY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAGNNHPKKTKTPYVQAFGISALFSFSYTEIYRIVSQKQI--A 182
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
E D S G VV D + K CC +
Sbjct: 183 ERSANDESP--GNNVVDISVPPTTDGQRGSKLQCCQN 217
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 127/168 (75%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
LFK+VLIGDS VGK+NL +RF DEF SKSTIGV+F T+ + I+GK VKAQIWDTAGQ
Sbjct: 11 LFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKAQIWDTAGQ 70
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
ER+RA+TSAYYRGAVGA+LVYDIS+ TF ++ +WL EL ++ +V+ +L+GNK DLK
Sbjct: 71 ERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLIGNKCDLKH 130
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
R V T + A+ QG+ FMETSALDS NV AF + +IY ++S+
Sbjct: 131 LRCVLTEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYYLISK 178
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 125/165 (75%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
+VLIGDS VGKSNLL R+ ++EF SKSTIGVEF T+ + + K +KAQIWDTAGQ+R+
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLVYDIS+ T++++ +WL EL H+D ++V +LVGNKSDL+ R
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLRHLRN 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
V T E K A+ L F+ETSAL S+NV AF T++ EIY + R
Sbjct: 121 VPTEEAKNFAQRNNLSFIETSALHSTNVETAFHTILQEIYKNVVR 165
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 136/189 (71%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYL KVVLIGDS VGKSNLL+RFA++EF SK+TIGVEF T+ ++ K +KAQIWDTA
Sbjct: 10 DYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKIIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAV A LVYDI++ TF ++ +WL EL ++D N+V +LVGNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVVMLVGNKTDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V + + AE L F+ETSALDS+NV AF+ ++ +N S+ +E ++
Sbjct: 130 NNLRAVKVEDAQIYAEKNELAFIETSALDSTNVVEAFEQIIQIYHNSESKFGDQKEEAEE 189
Query: 192 KDSSSFNGK 200
K ++ GK
Sbjct: 190 KYENTIKGK 198
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 140/192 (72%), Gaps = 4/192 (2%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+E + DYLF VLIGD+ VGK+N+L R+A++EFY ++KST+GVEF ++ + I+ K +K
Sbjct: 4 AEPEERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNKTIK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDI+ R TFD+IG WL EL +SD ++ +L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMTIVL 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYN-ILSRKV 183
VGNK DL + R + + E AE + F+ETSA DS+ + AF+T+++ IY IL +
Sbjct: 122 VGNKCDLANLRVIESQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSGIYTCILVHPI 181
Query: 184 M-ISQELKQKDS 194
+ IS+ + D+
Sbjct: 182 IEISKRIDAHDT 193
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 117/148 (79%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSAL 159
+ R V T E +A AE L F+ +L
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIRDLSL 156
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 148/223 (66%), Gaps = 11/223 (4%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
++E+ D+LFK+VLIGDS VGKS L++RF +D+F + TIGVEF T+ + I+ K +K
Sbjct: 4 NQEEDVYDFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIK 63
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGA GAL+V+DI+++ +F+++ +W EL HSD+ +VT+L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTML 123
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
+GNK DL D R ++ A+ + ++ETSAL S+NV AF ++ IY+
Sbjct: 124 IGNKCDLADQRNISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIYD-----ST 178
Query: 185 ISQELKQKDSSSF--NGKTVVLEGEKKEAD----AEPKKAGCC 221
IS ++K + F N +T+ LE + K D +E K CC
Sbjct: 179 ISGNTQRKSIAKFGKNIQTLSLENKLKNKDQKQESEDNKKSCC 221
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 152/217 (70%), Gaps = 8/217 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK VLIGDS VGKSNL++RFA+DEF +SK TIGVEF + + + K +KAQI
Sbjct: 7 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 66
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQERFRA+TS+YYRGA+G +LVYDI+RR TF ++ +WL+EL + ++V +LV N
Sbjct: 67 WDTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMVVVLVAN 126
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL +REV EG+ AE +GL FMETSAL + NV AF ++T+I++I+S+K S
Sbjct: 127 KSDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQK---SL 183
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEAD--AEPKKAGCCS 222
E K ++ +V + E + AD K+A CCS
Sbjct: 184 ETKMNGPTTL---SVPIGKEIQVADEVTATKQANCCS 217
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 132/189 (69%), Gaps = 15/189 (7%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S E DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ ++I K VK
Sbjct: 2 SNEHDDYDYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIEKKVVK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRR---------------QTFDSIGRWL 109
AQIWDTAGQER+RA+TSAYYRGAVGALLVYD++++ +TF + +WL
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFADVEKWL 121
Query: 110 NELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQ 169
EL H+D +V +L GNK DL+ R VTT + + A + L F+ETSAL+S N+ AAFQ
Sbjct: 122 AELRDHADSKIVIMLTGNKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNIDAAFQ 181
Query: 170 TVVTEIYNI 178
V++ I+ +
Sbjct: 182 KVLSVIHEV 190
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 142/216 (65%), Gaps = 10/216 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D D+LFK+VLIGDS VGK+N+L RF ++F SK TIGVEF T+ + +GK VK QI
Sbjct: 6 DEEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSVKCQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+T+AYYRGAVGA + YD++R TF + +WL EL H+D N+V I++GN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVIIMIGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+D D R V T E E Q + F+ETSALD +N+ AF +V I++ + K ++
Sbjct: 126 KTDAVDQRAVRTDEASNFCEQQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSKT--AK 183
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKA--GCC 221
++ Q ++ V+ E+K ++ KK+ GCC
Sbjct: 184 KVVQVETDP------VVLSEQKTPQSKSKKSSEGCC 213
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 144/221 (65%), Gaps = 20/221 (9%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDIN-GKEVKAQ 66
D+ DYLFK+VLIGDS VGKSNLL RF + F +SKSTIGVEF T+ + +N GK KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIAKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGA+GA++VYDI+ + +F S+ +WL ELH ++D N+ LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITICLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
NKSDL REV +G+A A L F ETS L+S NV AF+ +LSR IS
Sbjct: 124 NKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFK-------ELLSR---IS 173
Query: 187 QELKQKDSSSFN------GKTVVLEGEKKEADAEPKKAGCC 221
++ + DSS+F K ++ G K KK CC
Sbjct: 174 EKHTRFDSSTFPVSGSTMPKNTIVLGVKA---MRKKKISCC 211
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 126/169 (74%), Gaps = 1/169 (0%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQ 66
D DYLFK+VLIGDS VGKSNLL RF + F +SKSTIGVEF T+ + + NGK KAQ
Sbjct: 4 DHNYDYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGA GA++VYDI+ RQ+F S+ RWL EL+ + D N+V +L G
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLAG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
NKSDL + REV+T + + A+A L F ETS L+S NV AF +++ I
Sbjct: 124 NKSDLVNLREVSTEDAERFAKANNLLFFETSCLNSDNVETAFTELLSAI 172
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 126/169 (74%), Gaps = 1/169 (0%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDIN-GKEVKAQ 66
D+ DYLFK+VLIGDS VGKSNLL RF + F +SKSTIGVEF T+ + +N GK KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGA+GA++VYDI+ + +F S+ +WL ELH ++D N+ LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITICLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
NKSDL REV +G+A A L F ETS L+S NV AF+ ++++I
Sbjct: 124 NKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSKI 172
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 130/176 (73%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA S + D+LFK+VLIGDS VGKSNLL R+ +++F NS+STIGVEF T+ + +
Sbjct: 1 MALISNDQDHYDHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVED 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+ V+AQIWDTAGQER+RA+T+AYYR AVGALLVYDI++ T+ +I RW+ EL H++ ++
Sbjct: 61 QFVRAQIWDTAGQERYRAITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSI 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
+LVGNKSDLK R V+ E A A+ + F+ETSALD++NV AF V+ +IY
Sbjct: 121 SVLLVGNKSDLKSQRAVSFEEANAYAKNNNIHFIETSALDATNVEIAFVKVIQDIY 176
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 123/156 (78%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIWDTAG ER+
Sbjct: 33 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 92
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +V +LVGNKSDL ARE
Sbjct: 93 RAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 152
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVV 172
V T E + AE GL F+ETSALDS+NV AF+TV+
Sbjct: 153 VPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 188
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK+VLIG+ VGKSNLL+RF R+EF SK TIGVEF T+ + + GK VK QIWDTAG
Sbjct: 7 YLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAG 66
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
ERFR S+YYRGA+GALLVYDIS+ +T++S+ +WL L H++ ++V LVGNKSDL
Sbjct: 67 MERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS 126
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
A V T E K AE + F+ETSALD++NV AAF +VTEIY ++S K
Sbjct: 127 HA--VPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 174
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 139/195 (71%), Gaps = 3/195 (1%)
Query: 30 LLARFARDEFYPNSKSTIGVEFQTQKMDIN-GKEVKAQIWDTAGQERFRAVTSAYYRGAV 88
+L+RF RDEF SKSTIGVEF T+ + ++ GK +KAQIWDTAGQER+RA+TSAYYRGAV
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 89 GALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEA 148
GALLVYDI++RQ+F+++ RWL EL H+D N+V +LVGNKSDLK R V+ E A
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANR 120
Query: 149 QGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFNGKTVVLEGEK 208
+ L F+ETSALD++NV AF ++ EIY +L +K I ++ Q + G+ + L+ E+
Sbjct: 121 EHLAFIETSALDATNVEQAFHQILAEIY-LLRQKKQI-EDNPQSTTQPGRGQKIHLDEER 178
Query: 209 KEADAEPKKAGCCSS 223
++ + GCCS+
Sbjct: 179 TDSQIRQSRRGCCSA 193
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 124/155 (80%)
Query: 18 VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFR 77
VLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + + VKAQIWDTAG ER+R
Sbjct: 1 VLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYR 60
Query: 78 AVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREV 137
A+TSAYYRGAVGAL+V+DI++ QT+D + RWL EL+ H++ ++V +LVGNKSDL REV
Sbjct: 61 AITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREV 120
Query: 138 TTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVV 172
T E K AE +GL F+ETSALDS+NV AF+TV+
Sbjct: 121 PTEEAKMFAENKGLLFIETSALDSTNVEEAFETVL 155
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 129/168 (76%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
++D D++FK+VLIGDS VGKSNLL+RF +D+F+ + K+TIGVEF T+ + + K +KA
Sbjct: 5 KKDEEHDFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNKLIKA 64
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER++++T+AYYRGAVGALL+YDI++ +F +I +WLNE+ H++ ++V +LV
Sbjct: 65 QIWDTAGQERYKSITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIVIMLV 124
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVT 173
GNKSDLK R+V E AE + F+E SALDSSNV +F ++T
Sbjct: 125 GNKSDLKHLRQVKQEEATLFAENNNIAFIEASALDSSNVELSFYRLIT 172
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 148/222 (66%), Gaps = 14/222 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M +EED +++FKVVLIG+S VGK+NLL+RF R+EF +S++TIGVEF T+ + +
Sbjct: 1 MGNRAEEDY--NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGT 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
+KAQIWDTAG E +R T YYRGAVGALLV+D+++ QT+ + RWL EL+ H++ +
Sbjct: 59 AAIKAQIWDTAGLELYRG-TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATI 117
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL AREV T E + AE GL F+ETSALDS+NV AF+TV+ EI+ +S
Sbjct: 118 VVMLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS 177
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP-KKAGCC 221
++ +Q + S + L + D P +K CC
Sbjct: 178 KQ-------RQNSTRSI---PITLGNAQAGQDPSPGEKRPCC 209
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 121/157 (77%)
Query: 18 VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFR 77
VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + GK +KAQIWDTAGQER+R
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYR 60
Query: 78 AVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREV 137
A+TSAYYRGAVGALLVYDIS+ T++++ +WL+EL HSD ++V +L+GNK DL+ R V
Sbjct: 61 AITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIGNKCDLRHLRMV 120
Query: 138 TTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTE 174
T E + A + LFF ETSALD++NV AF V+ +
Sbjct: 121 PTDEAREFAMREKLFFTETSALDATNVDEAFVQVLKD 157
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 143/218 (65%), Gaps = 16/218 (7%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDS VGKS LL FAR+ SKSTIGVEF T+ + K VKAQIWDTA
Sbjct: 9 DYVFKVVVIGDSGVGKSQLLMGFARNHNLE-SKSTIGVEFATRSIRFEDKVVKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFM------ETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
+ R V T + KA AE + FFM ETSAL AF+ V+T+IY I S+K +
Sbjct: 128 RHLRAVATEDAKAFAEMESTFFMGNIRYGETSALKE-----AFKNVLTDIYRIASQKNLS 182
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + + G+ V++ + + K CCS+
Sbjct: 183 ANAAQ----THLQGQGKVVQNDDVQEPQGKSKRSCCSN 216
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 127/169 (75%), Gaps = 1/169 (0%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDIN-GKEVKAQ 66
D++ DYLFK+VLIGDS VGKSNLL RF + F +SKSTIGVEF T+ + +N GK KAQ
Sbjct: 4 DQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGA+GA++VYDI+ + +F ++ +WL ELH ++D N+ LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITICLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
NKSDL REV +G+A A L F ETS L+S NV AF+ ++++I
Sbjct: 124 NKSDLTHLREVNKEDGEAFARENDLLFFETSCLNSENVDVAFKELLSKI 172
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 123/163 (75%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
++K+V+IG+S VGKSNLL RF R+EF P K TIGVEF T+ ++ GK ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
E++RA+T AYYRGA GA+ VYD+S++ +FD+I RW+NEL D ++ ++VGNK+DLK
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV T++G A+ FF+ETSALD +NV AF ++ +IY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIY 170
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 123/163 (75%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
++K+V+IG+S VGKSNLL RF R+EF P K TIGVEF T+ ++ GK ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
E++RA+T AYYRGA GA+ VYD+S++ +FD+I RW+NEL D ++ ++VGNK+DLK
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV T++G A+ FF+ETSALD +NV AF ++ +IY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIY 170
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 123/163 (75%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
++K+V+IG+S VGKSNLL RF R+EF P K TIGVEF T+ ++ GK ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
E++RA+T AYYRGA GA+ VYD+S++ +FD+I RW+NEL D ++ ++VGNK+DLK
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITIMIVGNKADLKQ 127
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV T++G A+ FF+ETSALD +NV AF ++ +IY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIY 170
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 134/174 (77%)
Query: 11 EDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDT 70
E +LFK+VLIGDS+VGKSN+L+RF + +F +S+ TIGVEF T+ + NGK ++AQIWDT
Sbjct: 9 EKHLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKIIQAQIWDT 68
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
GQER++++TSAYYRGAVGA+L+YDI++++TF++I +W+ EL +++ NVV +L+GNK+D
Sbjct: 69 CGQERYKSITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVAMLIGNKAD 128
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
LK R+V + + AE + FME SA D +NV AF ++ EIY +++++ +
Sbjct: 129 LKAQRKVPSDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLINEIYQLINKQSL 182
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 133/175 (76%), Gaps = 3/175 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
EED DYLFK+V+IGDS VGK+N+L+RF +DEF SK TIGVEF T+ + + K +K
Sbjct: 4 PEEDY--DYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQE++RA+T+AYYRGAVGAL ++DI+++ TFD++ +WLNEL ++D N+V +L
Sbjct: 62 AQIWDTAGQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIML 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNIL 179
VGNK DL + R V T + A AE L ++ETSALDS+NV AFQ VT ++IL
Sbjct: 122 VGNKCDLNENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAFQR-VTRDFSIL 175
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 125/170 (73%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF DEF SKSTIGVEF T+ +++ K++KAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G ER+RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL
Sbjct: 68 GLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
R V T E K A + F ETSAL+S NV AF+ ++ I+ ++S+
Sbjct: 128 AHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSK 177
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 136/205 (66%), Gaps = 3/205 (1%)
Query: 18 VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFR 77
VL GDS VGKSNLL+RF+++EF +S+ TIGVEF + + + K VK QIWDTAGQERFR
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 78 AVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREV 137
A+TS+YYRGA+GALLVYDI+R TFD+I +WL EL + +V ILVGNK DL +REV
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120
Query: 138 TTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSF 197
E + LAE + LFFMETSA D+ NV AF +V I+ I S+K + + +K +
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180
Query: 198 NGKTVVLEGEKKEADAEPKKAGCCS 222
NGK ++ E + CCS
Sbjct: 181 NGKEII---SIHEVTPTKPNSNCCS 202
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 149/228 (65%), Gaps = 16/228 (7%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMD-IN 59
MA D DYLFKV IG+S VGKSNL++RFA+DEF +SK +IGVEF + +
Sbjct: 1 MAVADAFDEHCDYLFKVX-IGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVR 59
Query: 60 GKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMN 119
K +KAQIWDTAGQERFRA+TS+YYRGA+GA+LVYDI++R TF ++G+WL+EL +
Sbjct: 60 DKLIKAQIWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGED 119
Query: 120 VVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNIL 179
+V +LV NKSDL +R+V +GK AE +GL FMETSAL + NV AF ++T+I++I+
Sbjct: 120 MVVVLVRNKSDLDQSRQVEREKGKGFAETEGLCFMETSALQNLNVDEAFXEMITKIHDII 179
Query: 180 SRKVMISQELKQKDSSSFNGKTVVLEGEKK-----EADAEPKKAGCCS 222
S+K + + NG + L K+ E A + CCS
Sbjct: 180 SQKSL---------ETKMNGAALNLPSGKEIHIADEVTATKQAKYCCS 218
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 153/220 (69%), Gaps = 15/220 (6%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+ D DYLFK+VL GDS VGKSNLL RF +++F +SK+TIGVEF T+ + I+GK VK
Sbjct: 2 SKADDDYDYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITISGKVVK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+T+AYYRGA+GA+LVYDI+ +Q+F+++ +W+ E+ ++D ++V ++
Sbjct: 62 AQIWDTAGQERYRAITAAYYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKDIVIMI 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
+GNKSDLK R + T G+ LA+ + FME SA D +NV AF ++ +IY L++
Sbjct: 122 IGNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFIQIIQQIYQNLTK--- 178
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKE---ADAEPKKAGCC 221
+L++ D S L+ EK + ++ KK GCC
Sbjct: 179 ---QLQKYDQMSH------LQSEKLDLEITNSGNKKQGCC 209
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/163 (53%), Positives = 123/163 (75%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
++K+V+IG+S VGKSNLL RF R+EF P K TIGVEF T+ ++ GK ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
E++RA+T AYYRGA GA+ VYD+S++ +FD+I RW+NEL D ++ ++VGNK+DLK
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV T++G A+ FF+ETSAL+ +NV AF ++ +IY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLLIQIY 170
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 124/170 (72%), Gaps = 1/170 (0%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQ 66
D + DYL+K+VLIGDS VGKSNLL R+ ++EF SKSTIGVEF T + NGK K Q
Sbjct: 4 DDSYDYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKVQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGAVGAL+ YDI+ R +F+++ RWL EL ++ + V LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
NK D+ + R+VT EG LA + + F+E SALDS+NV AAF ++ IY
Sbjct: 124 NKVDMVNLRQVTKDEGAKLARLENILFLECSALDSTNVNAAFAELIETIY 173
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
+VLIGDS VGKSNLL R+ ++EF SKSTIGVEF T+ + + K +KAQIWDTAGQ+R+
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RAVTSA YRGAVGALLVYDIS+ T++++ +WL EL +D ++V +LVGNKSDL+ R
Sbjct: 61 RAVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLRHLRN 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E K+ A+ L F+ETSA S+NV +AF T++ EIY + R +S + K S
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSASQSTNVESAFNTILQEIYKNVVRNTGVSGD-DSKSSKP 179
Query: 197 FNGKTVV 203
G+ VV
Sbjct: 180 EGGEIVV 186
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 136/194 (70%), Gaps = 9/194 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RFA++EF +SKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 38 DYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQIWDTA 97
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQTFD + RW+ EL +H+D ++V +L+GNK DL
Sbjct: 98 GQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWIEELRSHADNSIVIMLIGNKGDL 157
Query: 132 KDAREVTTAEGKALAEAQGLFFME---------TSALDSSNVTAAFQTVVTEIYNILSRK 182
D R V T + + G FF+ +L+S+N T+ +I+S
Sbjct: 158 VDQRVVHTDKCCGVCRGSGPFFLRDFKINKVVSKRSLESNNGKNNIATLKGSKIDIISGP 217
Query: 183 VMISQELKQKDSSS 196
+ E+K+ S S
Sbjct: 218 ELDITEMKEVPSCS 231
>gi|1842071|gb|AAB47558.1| Nt-rab11e homolog [Mesembryanthemum crystallinum]
Length = 167
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 126/169 (74%), Gaps = 3/169 (1%)
Query: 54 QKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELH 113
Q +DI+GK+VKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TFDSI RWL+EL
Sbjct: 1 QSIDIDGKKVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFDSISRWLDELK 60
Query: 114 THSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVT 173
THSD V +LVGNK DL D R V+T EGK+LAE GLFF+ETSA DS+NV +F+ V+
Sbjct: 61 THSDTTVARMLVGNKCDLDDIRAVSTDEGKSLAEEHGLFFIETSAKDSTNVKTSFEIVIK 120
Query: 174 EIYNILSRKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
EIY +SRKV+ S K + S + + ++ +K++ + + CCS
Sbjct: 121 EIYCSVSRKVLNSDSYKAELSVN---RVSLVNDDKQKQNQGYISSSCCS 166
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 143/212 (67%), Gaps = 23/212 (10%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A A AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFA------------------EAAFQTILTEIYRIVSQKQM--SDRRE 168
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 169 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 197
>gi|226507848|ref|NP_001151959.1| ras-related protein Rab11A [Zea mays]
gi|195651361|gb|ACG45148.1| ras-related protein Rab11A [Zea mays]
gi|223945145|gb|ACN26656.1| unknown [Zea mays]
gi|414886383|tpg|DAA62397.1| TPA: Ras protein Rab11A [Zea mays]
Length = 248
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 147/205 (71%), Gaps = 3/205 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
SE++ DY+FKVV++GD+AVGK+ LLARFARDEF +SK TIGVEFQT+ + ++ K VK
Sbjct: 21 SEKEAEIDYVFKVVVVGDAAVGKTQLLARFARDEFALDSKPTIGVEFQTRTLTLHRKRVK 80
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
QIWDTAGQER+RAVTSAYYRGA+GA++VYD++RR TF+ + RW+ EL H+D + V L
Sbjct: 81 TQIWDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSTVVAL 140
Query: 125 VGNKSDLKDA-REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
+GNK+D+ A REV E LAE QGLFF E SAL NV AF T++ E++ +SR+
Sbjct: 141 IGNKADMPAARREVPADEAARLAEDQGLFFSEASALTGDNVERAFLTLLEEVFAAVSRRA 200
Query: 184 MISQELKQK--DSSSFNGKTVVLEG 206
+ E ++ D G+ + L+G
Sbjct: 201 LELDEARRMRGDQGDGGGEVLSLKG 225
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/165 (58%), Positives = 122/165 (73%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
+VLIGDS VGKSNLL R+ + EF SKSTIGVEF T+ + + K +KAQIWDTAGQ+R+
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRY 60
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RAVTSAYYRGAVGALLVYD+S+ T++ + +WL EL +D +V +LVGNKSDL+ R
Sbjct: 61 RAVTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLRHLRN 120
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
V T E K+ A+ L F+ETSA S+NV AAF T++ EIY + R
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSAQSSTNVEAAFNTILQEIYKNVVR 165
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE--VKAQIWD 69
DYLFK+VLIGD+ VGKSNLL R+ +++F NS+STIGVEF T+ + + G + VKAQIWD
Sbjct: 13 DYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKM-GDDCYVKAQIWD 71
Query: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKS 129
TAGQER+RA+T+AYYR AVGAL+VYDIS+ +F++I +W+ EL H+D N+ L+GNKS
Sbjct: 72 TAGQERYRAITNAYYRNAVGALMVYDISKPNSFENIQKWMQELRDHADSNIAITLIGNKS 131
Query: 130 DLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNI 178
DLK R V + + LA+ + F+ETSAL+S NV AAF ++ EIY +
Sbjct: 132 DLKHLRAVKFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLINEIYRL 180
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 140/209 (66%), Gaps = 11/209 (5%)
Query: 17 VVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERF 76
VVLIGDS VGKSNLL+RF ++F SKSTIGVEF T+ +++ GK++KAQIWDTAGQER+
Sbjct: 28 VVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERY 87
Query: 77 RAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARE 136
RA+TSAYYRGAVGAL+VYDIS+ ++++ WL EL ++D NV L+GNKSDL R
Sbjct: 88 RAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDLDHLRA 147
Query: 137 VTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 196
V T E + A+ L F ETSAL S NV AF+ ++T IY ++S+ ++ DS +
Sbjct: 148 VPTDEARNFAQENQLLFTETSALKSENVELAFRELITAIYQMVSK-----HQVDLGDSGN 202
Query: 197 FN---GKTVVLEGEKKEADAEPKKAG-CC 221
N G T+ L E + K +G CC
Sbjct: 203 NNAPKGPTISLTPAPNE--HKKKSSGNCC 229
>gi|146180701|ref|XP_001021320.2| Ras family protein [Tetrahymena thermophila]
gi|146144411|gb|EAS01075.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777750|dbj|BAJ21271.1| Rab-family small GTPase Rab1A [Tetrahymena thermophila]
Length = 211
Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 145/210 (69%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIG+SAVGKS+LL RF+ + F TIGV+F+ + DI GK VK QIWDTA
Sbjct: 8 DYLFKLLLIGNSAVGKSSLLLRFSDNIFNDCFLPTIGVDFKIRTFDIQGKAVKLQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERF+ +TS+YY+GA G +LVYDI+ +QTF I WL E +++ NV+ +LVGNK+DL
Sbjct: 68 GQERFKTITSSYYKGAHGIILVYDITDKQTFKDIDNWLAEADKNANENVIKLLVGNKADL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R+VT EGK LA++ G+ F+ETSAL+S+NV AF T+ TEI +V + E
Sbjct: 128 ESKRQVTFEEGKELADSLGIKFIETSALNSNNVETAFITLATEI----KSRVQKNTETAP 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ +++ GKT + G+ + + KK GCC
Sbjct: 184 RGANAQTGKTKIKAGD--DLSNKKKKDGCC 211
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 140/210 (66%), Gaps = 7/210 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKV+LIG+S VGKS+LL RFA D F N TIGV+F+ + ++++GK +K QIWDTA
Sbjct: 6 DYLFKVLLIGNSGVGKSSLLLRFADDVFTDNFMPTIGVDFKIRTIEVDGKTIKLQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERF+ +TS+YY+GA G ++ YDI+ R++F +I W+NE+ H+ N+ ILVGNKSD+
Sbjct: 66 GQERFKTITSSYYKGAHGIIVTYDITDRESFSAIENWMNEVEKHASDNISRILVGNKSDM 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+DAR+V+T EGK LAE + F+ETSA D NV AF + EI +V I+Q K
Sbjct: 126 EDARQVSTDEGKELAEHYNVRFLETSAKDCKNVEEAFTMMTREI----KSRVAITQPKKA 181
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + + + + + KK GCC
Sbjct: 182 TEQTQAQR---INKNQHQTKKIQEKKGGCC 208
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 112/136 (82%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAE 147
+ R V T E +A AE
Sbjct: 129 RHLRAVPTDEARAFAE 144
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 112/136 (82%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAE 147
+ R V T E +A AE
Sbjct: 129 RHLRAVPTDEARAFAE 144
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 112/136 (82%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAE 147
+ R V T E +A AE
Sbjct: 129 RHLRAVPTDEARAFAE 144
>gi|225678958|gb|EEH17242.1| GTP-binding protein yptV1 [Paracoccidioides brasiliensis Pb03]
Length = 222
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 132/189 (69%), Gaps = 6/189 (3%)
Query: 33 RFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALL 92
RF R+EF +SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALL
Sbjct: 40 RFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALL 99
Query: 93 VYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLF 152
VYD +++QTF + RWL EL H+D N+V +LVGNK D K R+V T++ A+ L
Sbjct: 100 VYDTTKKQTFANCERWLKELREHADKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLS 159
Query: 153 FMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFNGKTVVLEGEKKEAD 212
F+ETSALD++NV AFQ ++TEIY I+S K + E S + V+ + ++AD
Sbjct: 160 FIETSALDATNVELAFQNILTEIYRIVSSKAL---ENGSSSQSPLGDRKVIEISKTQDAD 216
Query: 213 AEPKKAGCC 221
A+ K CC
Sbjct: 217 AKQK---CC 222
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/165 (56%), Positives = 124/165 (75%), Gaps = 1/165 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDT 70
DYLFK+VLIGDS VGKSNLL RF + F +SKSTIGVEF T+ + + NGK KAQIWDT
Sbjct: 8 DYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQIWDT 67
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RA+TSAYYRGA GA++VYDI+ +Q+F ++ RWL EL+ + D N++ LVGNKSD
Sbjct: 68 AGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALVGNKSD 127
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
L REV++ +G+ A + L F ETS L++ N+ AF +++ I
Sbjct: 128 LTHLREVSSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSSI 172
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 128/173 (73%), Gaps = 5/173 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQ 66
D+ DYLFK+VLIGDS VGKSNLL RF + F +SKSTIGVEF T+ +++ NGK KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+TSAYYRGA GA++VYDI+ +Q+F ++ RWL+EL+ + D N++ LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVG 123
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNIL 179
NKSDL REVT +G+ A++ L F ETS L + N+ F TE+ N++
Sbjct: 124 NKSDLTHLREVTYEDGERYAKSNNLIFFETSCLSNENIDTTF----TELLNLI 172
>gi|74137312|dbj|BAE22024.1| unnamed protein product [Mus musculus]
Length = 193
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 129/188 (68%), Gaps = 5/188 (2%)
Query: 37 DEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDI 96
D + SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI
Sbjct: 9 DYLFKESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 68
Query: 97 SRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMET 156
++ T++++ RWL EL H+D N+V +LVGNKSDL+ R V T E +A AE L F+ET
Sbjct: 69 AKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIET 128
Query: 157 SALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFNGKTVVLEGEKKEADAE-P 215
SA+DS+NV AF+ ++TEIY I+S+K I+ +S G VV D + P
Sbjct: 129 SAMDSTNVEEAFKNILTEIYRIVSQK-QIADRAAHDESP---GNNVVDISVPPTTDGQRP 184
Query: 216 KKAGCCSS 223
K CC S
Sbjct: 185 NKLQCCQS 192
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDT 70
D++FK+VL+GDS VGKSNL+ RF ++EF +SKSTIGVEF T+ + I + K VKAQIWDT
Sbjct: 7 DFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDT 66
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+R++ S+YYRGAVGALLVYD++ R +F+ + WL E+ +++ + + +LVGNK D
Sbjct: 67 AGQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMD 126
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
L + R V +G++ A GL F+ETSALD++ V AFQ ++ EIY ++K + SQ
Sbjct: 127 LHEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQLKSQ 183
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 134/181 (74%), Gaps = 5/181 (2%)
Query: 43 SKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTF 102
SKSTIGVEF T+ + ++ K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF
Sbjct: 5 SKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTF 64
Query: 103 DSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSS 162
+++ RW+ EL H+D N+V +LVGNK+DL+ R V+T + KA AE + FFMETSAL+S
Sbjct: 65 ENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESM 124
Query: 163 NVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
NV AF V+T+IY+++S+K + ++ ++ G+T+ + G K+ + KK+ CCS
Sbjct: 125 NVENAFTEVLTQIYHVVSKKAL---DIGDDPAAPPKGQTINVGG--KDDVSAVKKSACCS 179
Query: 223 S 223
S
Sbjct: 180 S 180
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 146/216 (67%), Gaps = 9/216 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VL+GD VGK+ + R+ DEF P SKSTIGVEF + ++ING ++K QIWDT+
Sbjct: 4 DYLFKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDTS 63
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G+ER+RA+TSAYYRG+VGA+LV+D+++ ++F+S+ W ++L ++D N+V +VGNK DL
Sbjct: 64 GEERYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKIDL 123
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
REV+T E + A G F+METSALD + V AF+ V +I+ I+ + Q K+
Sbjct: 124 P-TREVSTVEAERFARGNGFFYMETSALDGTGVENAFRQVTKKIFEIVDSR---QQARKK 179
Query: 192 KDSSSFNGKTVVLE-GEKKEADAEP---KKAGCCSS 223
+S G+T ++ GE E A+P + CC +
Sbjct: 180 TVRASSIGQTRSIKLGEADEV-AKPSIFSSSDCCKT 214
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV-KAQIWDT 70
DYLFK+V++GDS VGKSNLL R+ ++EF NS T+G+EF T+ + ++ +AQIWDT
Sbjct: 6 DYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRAQIWDT 65
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
GQER+R++TSAYYRGAVGAL+VYD++ +++FD++ WL EL ++ N+V +LVGNK D
Sbjct: 66 CGQERYRSLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLVGNKID 125
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
LKD REV + A+ QG+ F+ETSAL+ SNV AF+ ++ EI+ +++++
Sbjct: 126 LKDKREVRKEDASQFAQEQGIAFIETSALECSNVDIAFERIIYEIHRVVAQQ 177
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 136/210 (64%), Gaps = 6/210 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKV+ GDS+VGKSN+++R R+ F K T+GVEF + GK + AQIWDT
Sbjct: 10 DYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKTIAAQIWDTC 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
G ER+ + T + YRG GA+LVYDI+RR+TF+++G+WL EL H++ N V +L+GNKSDL
Sbjct: 70 GLERYASFTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVIMLIGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V+T + + AE +GL FMETSA S+NV A Q ++ EI+ + S K + S+E
Sbjct: 130 QHLRSVSTEDAQKFAEKEGLLFMETSAFKSTNVDKALQIILQEIHRVFSEKELHSEE--S 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
S+ +GK G K + + + GCC
Sbjct: 188 NGVSTQDGKPTF--GAKTRTNTQ--RTGCC 213
>gi|378755008|gb|EHY65036.1| GTP-binding protein ypt3 [Nematocida sp. 1 ERTm2]
Length = 210
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
E++ +YL+K+VLIGDS VGK+NLL R A + F N+KSTIGVEF T+ +NGK++KAQ
Sbjct: 8 EEQEYEYLYKIVLIGDSGVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKAQ 67
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSI-GRWLNELHTHSDMNVVTILV 125
IWDTAGQER+RA+TSAYYRGAVGA++VYDISR++TFD+ W+ +L +S+ +V LV
Sbjct: 68 IWDTAGQERYRAITSAYYRGAVGAIVVYDISRKETFDNARTEWIKQLKDNSESGLVISLV 127
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
GNK+DL + R+V+ E + A+ G ETSAL NV AF+T++ +IY
Sbjct: 128 GNKTDLNEKRQVSLQEAREAAQIGGYQLTETSALSDVNVQEAFETLIQKIY 178
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 2/169 (1%)
Query: 14 LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQ 73
+ VVLIG+ VGKSNLL+RF R+EF SK TIGVEF T+ + + GK VK QIWDTAG
Sbjct: 22 IISVVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGM 81
Query: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKD 133
ERFR S+YYRGA+GALLVYDIS+ +T++S+ +WL L H++ ++V LVGNKSDL
Sbjct: 82 ERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLSH 141
Query: 134 AREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
A V T E K AE + F+ETSALD++NV AAF +VTEIY ++S K
Sbjct: 142 A--VPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 188
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I K VK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIADKSVKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF +GRWL E HS N+V +L+GNK+DL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFKHLGRWLEEARQHSQSNMVIMLIGNKNDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY-NILSRKVMISQE 188
R V+T EGKA A+ GL FMETSA + NV AF EI+ NI+S K+ +S E
Sbjct: 125 HRRAVSTEEGKAFADKHGLIFMETSAKTAYNVEQAFINTAEEIHGNIVSGKIDVSNE 181
>gi|326427375|gb|EGD72945.1| GTP-binding protein yptV1 [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 140/217 (64%), Gaps = 10/217 (4%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGDSAVGKS LL +F F TIGVEF + + I+G ++K QIWDTAG
Sbjct: 6 YLFKYIIIGDSAVGKSCLLLQFTDHRFQTVHDLTIGVEFGARMVTIDGHQIKLQIWDTAG 65
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF +G WL + HS+ N+V ILVGNK+DL+
Sbjct: 66 QESFRSITRSYYRGAAGALLVYDITRRETFQHLGTWLEDARAHSNPNMVIILVGNKADLE 125
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ-EL-- 189
D R+V EG+ A +GL F+ETSA + NV AF T +IY L + V ++ EL
Sbjct: 126 DKRQVPREEGERFARERGLLFIETSAKTAMNVEDAFTTTANKIYEKLQQGVFDARNELNG 185
Query: 190 ----KQKDSSSFNG-KTVVLEGEKKEADAEPKKAGCC 221
Q ++ + G KTV L + K+ +E + GCC
Sbjct: 186 IKIGPQYNAGAPPGQKTVDLSKQSKQGSSE--EGGCC 220
>gi|340509040|gb|EGR34616.1| hypothetical protein IMG5_005710 [Ichthyophthirius multifiliis]
Length = 210
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 144/210 (68%), Gaps = 7/210 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIG+S+VGKS+LL RF+ + F TIGV+F+ + DI GK VK QIWDTA
Sbjct: 8 DYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERF+ +TS+YY+GA G +LVYDI+ RQTF I WL E +++ NV+ +LVGNK DL
Sbjct: 68 GQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDNWLAEADKNANENVIKLLVGNKIDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++ R+V+ EGK LA++ G+ F+ETSAL +SNV AF T+ TE I+SR S K
Sbjct: 128 ENKRQVSFDEGKELADSLGIKFIETSALTASNVENAFVTLATE---IISRVQKSSDNNKG 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ +S GKT + GE + + K+ GCC
Sbjct: 185 GNQAS--GKTRIRAGE--DINNIKKQGGCC 210
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 140/216 (64%), Gaps = 13/216 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFK++LIGDS VGK+N+L RF ++EF +SK TIGVEF T+ +++ K VK QIWDTA
Sbjct: 10 DFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKCQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+T+AYYRGAVGA + YDI+R TF +I +WL+E+ ++ N+V +++GNK D
Sbjct: 70 GQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMIGNKIDQ 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V + E L + + ++ETSA + NV AF +V+EI++ +S K +Q
Sbjct: 130 ANDRMVRSVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVSEIFSSMSSK-------QQ 182
Query: 192 KDSSSFNGKTVVLEGE------KKEADAEPKKAGCC 221
K+ G + L+ + K+ + +K CC
Sbjct: 183 KNVKQLQGDNLTLDDDLPSKSITKKTNCRKEKENCC 218
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 140/212 (66%), Gaps = 21/212 (9%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVV+IGDSAVGK+ +L+RF+++E + INGK +KAQIWDTA
Sbjct: 24 DYVFKVVVIGDSAVGKTQILSRFSKNE----------------TVTINGKVIKAQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGA+GA+LVYDI++RQ+FD + +W+ EL H+D ++V +LVGNK DL
Sbjct: 68 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIMLVGNKGDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D R V T + AE QGLFF ETSAL NV AF ++ EI +++S+K + +K
Sbjct: 128 VDLRMVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEINSVVSKKALECGNVK- 186
Query: 192 KDSSSFNGKTV-VLEGEKKEADAEPKKAGCCS 222
+ G + V+ G + E +E KK CS
Sbjct: 187 --GIALKGSKIDVISGAELEI-SEIKKLSSCS 215
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 142/211 (67%), Gaps = 12/211 (5%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ +++F+++ +WLNE+ ++ NV +LVGNKSDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ V KA A+ G+ F+ETSA +++NV AF T+ EI N ++ + +S K
Sbjct: 126 ASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSSTSKP 185
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ ++ G+ + P+K+GCCS
Sbjct: 186 NNVTNLRGQAI------------PQKSGCCS 204
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/165 (56%), Positives = 123/165 (74%), Gaps = 1/165 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDT 70
DYLFK+VLIGDS VGKSNLL RF + F +SKSTIGVEF T+ +++ NGK KAQIWDT
Sbjct: 7 DYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKAQIWDT 66
Query: 71 AGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSD 130
AGQER+RA+TSAYYRGA GA++VYDI+ +Q+F ++ RWL+EL+ + D N++ LVGNKSD
Sbjct: 67 AGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIALVGNKSD 126
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
L REVT +G+ A + L F ETS L++ N+ F ++ I
Sbjct: 127 LTHLREVTFEDGERYARSNNLLFFETSCLNNENIDTTFGELLNLI 171
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 113/142 (79%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
D+LFKVVLIGDS VGKSNLL+RF R++F SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +L GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLAGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFF 153
+ R V T E +A AE + +
Sbjct: 129 RHLRAVPTDEARAFAEKNTILY 150
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 11/213 (5%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM-ISQE--- 188
R+V EG+A A GL FMETSA ++NV AF EIY + I+ E
Sbjct: 125 SRRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGAFDINNEANG 184
Query: 189 LKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+K + N T V D P+ GCC
Sbjct: 185 IKLGPQNPSNPSTSV-------PDRPPQSGGCC 210
>gi|429327079|gb|AFZ78868.1| Rab GTPase-like protein [Coptotermes formosanus]
Length = 212
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
Query: 8 DRAE-DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
D AE DY+FK+V++GDS VG++NLL +F + F P S+STIGVEF+ + +++NGK VK Q
Sbjct: 2 DEAEFDYIFKIVIVGDSGVGRTNLLLQFVQGVFIPQSRSTIGVEFRVKTVEVNGKSVKIQ 61
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVG 126
IWDTAGQER+RA+T YYRGAV ALL+YDI+ +++S+ +W++EL H+D NV+ +L+G
Sbjct: 62 IWDTAGQERYRAITKNYYRGAVVALLLYDITSSSSYNSLQKWIDELKMHADGNVIVMLIG 121
Query: 127 NKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
NK DL R V A+ + LA F ETSA +++NV AF +V E+ N SR
Sbjct: 122 NKCDLSGQRTVLEADAQNLANDNSFLFFETSAKEATNVKEAFMALVRELVNQNSR 176
>gi|769801|emb|CAA54507.1| GTP binding protein [Glycine max]
Length = 155
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 117/157 (74%), Gaps = 3/157 (1%)
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TFDS+GRWL+EL TH D V +LV
Sbjct: 1 QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLV 60
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK DL++ R V+ EGK+LAEA+GLFFMETSALDS+NV AF+ V+ EIY +SRKV+
Sbjct: 61 GNKCDLENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKVLN 120
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S+ K + S N ++V G +P + CCS
Sbjct: 121 SETYKAE--LSVNRVSLVNNGASTSKQNQPYFS-CCS 154
>gi|340503618|gb|EGR30169.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 210
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 144/210 (68%), Gaps = 7/210 (3%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIG+S+VGKS+LL RF+ + F TIGV+F+ + DI GK VK QIWDTA
Sbjct: 8 DYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERF+ +TS+YY+GA G +LVYDI+ RQTF I WL E +++ NVV +LVGNK DL
Sbjct: 68 GQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDNWLAEADKNANENVVKLLVGNKIDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++ R+V+ EGK LA++ G+ F+ETSAL ++NV AF T+ TEI +V + + K
Sbjct: 128 ENKRQVSFDEGKELADSLGIKFIETSALTANNVENAFVTLATEI----KSRVQKTTDNKN 183
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+++ GKT + GE + + + + GCC
Sbjct: 184 NNAAG-QGKTKIKAGE--DINKKKSQGGCC 210
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 141/212 (66%), Gaps = 15/212 (7%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++ +GK +K QIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ +++F+++ +WLNE+ ++ NV +LVGNKSDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D + V++ KA A+ G+ FMETSA ++SNV AF + EI N +
Sbjct: 126 SDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKN----------RMAS 175
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ ++S TV + G+ +KAGCCSS
Sbjct: 176 QPANSARPATVQIRGQPVN-----QKAGCCSS 202
>gi|322694053|gb|EFY85893.1| GTP-binding protein ypt3 [Metarhizium acridum CQMa 102]
Length = 264
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 113/144 (78%)
Query: 30 LLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVG 89
L +RF R+EF +SKSTIGVEF T+ + ++ K +KAQIWDTAGQER+RA+TSAYYRGAVG
Sbjct: 35 LQSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVG 94
Query: 90 ALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQ 149
ALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL+ R V T E K+ A
Sbjct: 95 ALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTDEAKSFASEN 154
Query: 150 GLFFMETSALDSSNVTAAFQTVVT 173
L F+ETSALD+SNV AFQ ++T
Sbjct: 155 HLSFIETSALDASNVELAFQNILT 178
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 130/172 (75%), Gaps = 2/172 (1%)
Query: 7 EDRAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+ R EDY L+K+VLIGDS VGK+N+L +F R EF +SK+TIGVEF ++ + I+ K VK
Sbjct: 2 QHRTEDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGA+++YDI++ TF+++ +W+ EL ++D ++ ++
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMI 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
VGNK+D K R+V T A A+ G+ F+ETSA D +NV AF+ ++ +IY
Sbjct: 122 VGNKTDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIY 173
>gi|89258411|gb|ABD65429.1| Rab2 [Suberites domuncula]
Length = 214
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 129/213 (60%), Gaps = 7/213 (3%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TFD + WL + HS N+V +L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFDHLTTWLEDARQHSSSNMVIMLIGNKSDLD 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 192
REV + EG A A+ GL FMETSA ++NV AF EIY + V ++ +
Sbjct: 125 AKREVKSEEGLAFAKEHGLVFMETSAKTAANVEEAFINTAKEIYTKIQDGVF---DVNNE 181
Query: 193 DSSSFNGKTVVLEGEKKEADAEPKK----AGCC 221
+ G G + EP K GCC
Sbjct: 182 ANGIKLGPQHQTGGTVRPGTTEPGKPQGSGGCC 214
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/146 (63%), Positives = 116/146 (79%), Gaps = 2/146 (1%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A+ ++ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++ K
Sbjct: 3 AYRADED--YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V
Sbjct: 61 VLKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 122 TILVGNKSDLKDAREVTTAEGKALAE 147
+LVGNK+DL+ R V+T E AE
Sbjct: 121 VMLVGNKADLRHLRAVSTEETTNFAE 146
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 145/212 (68%), Gaps = 13/212 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS+VGKS LL RFA D + STIGV+F+ + ++++GK VK QIWDTA
Sbjct: 7 DYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ ++F+++ +WL+E+ ++ +V +LVGNK DL
Sbjct: 67 GQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D++ V T E KALA++ G+ F+ETSA +S NV AF T+ +EI +K M +Q +
Sbjct: 127 VDSKVVDTEEAKALADSLGMTFLETSAKESINVEKAFLTMSSEI-----KKRMATQPAAE 181
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ TV L G+ + E K+ CCSS
Sbjct: 182 RKP------TVHLHGKGQPIQQE--KSSCCSS 205
>gi|387592730|gb|EIJ87754.1| GTPase Ypt3 [Nematocida parisii ERTm3]
gi|387595356|gb|EIJ92980.1| GTPase Ypt3 [Nematocida parisii ERTm1]
Length = 206
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
Query: 7 EDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQ 66
E++ +YL+K+VLIGDS+VGK+NLL R A + F N+KSTIGVEF T+ +NGK++KAQ
Sbjct: 4 EEQEYEYLYKIVLIGDSSVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKAQ 63
Query: 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSI-GRWLNELHTHSDMNVVTILV 125
IWDTAGQER+RA+TSAYYRGAVGA++VYDI+R+++FD+ W+ +L +S+ +V LV
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGAIVVYDITRKESFDNARTEWIKQLKDNSESGLVISLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
GNK+DL++ R+V+ E + A+ ETSAL NV AF+ ++ +IY
Sbjct: 124 GNKTDLEEKRQVSQQEAREAAQIGDYLLTETSALSDVNVQEAFEALIKKIY 174
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 127/210 (60%), Gaps = 2/210 (0%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS+ N+V +L+GNKSDL
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM-ISQELKQ 191
REV EG+A A GL FMETSA ++NV AF EIY + V I+ E
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANG 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ T G P +GCC
Sbjct: 185 IKIGQQHSPTSPSLGSGNSPGG-PASSGCC 213
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 134/215 (62%), Gaps = 12/215 (5%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM-ISQE--- 188
REV EG+A A GL FMETSA ++NV AF EIY + V I+ E
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANG 184
Query: 189 --LKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ Q+ S ++ L G +A + +GCC
Sbjct: 185 IKIGQQHSPTYP----ALPGTGSQAGS--ASSGCC 213
>gi|440800473|gb|ELR21511.1| Rab GTPase, putative [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 143/226 (63%), Gaps = 12/226 (5%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING---- 60
S+ DYL K+V++GDS VGKSN+++RF D F +SK+TIGV F T+ M +
Sbjct: 3 SDASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSNDS 62
Query: 61 -----KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTH 115
K+VK Q+WDTAGQER+RA++SAYYRGA GAL+VYDI+ R++ DSI +WL E+ +
Sbjct: 63 TKDCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEIDKY 122
Query: 116 SDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
+VV LVGNK DL + R V+ EGK +A + +FF+ETSA D++N+ AF ++ EI
Sbjct: 123 CTQDVVVTLVGNKLDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLIKEI 182
Query: 176 YNILSRKVMISQELKQKDSSSFNGKTVVLEGEKKEADAE-PKKAGC 220
I S ++ + K + + + E+ E+D P ++GC
Sbjct: 183 --IQSNLSQVNNDGKIAGKAPSDTGITLKPPEEPESDPNAPPQSGC 226
>gi|348536088|ref|XP_003455529.1| PREDICTED: ras-related protein Rab-14-like [Oreochromis niloticus]
Length = 215
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 129/208 (62%), Gaps = 4/208 (1%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
Y+FK ++IGD VGKS LL +F +F + TIGVEF T+ M+++G++VK QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVKLQIWDTAG 69
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QERFRAVT +YYRGA GAL+VYDI+RR T++ + WL + ++ N V IL+GNK+DL+
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 192
R+VT E K AE GL F+E SA NV AF IY + S +L
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEEAFLEAAKRIYQNIQDG---SLDLNAA 186
Query: 193 DSSSFNGKTVVLEGEKKEADAEPKKAGC 220
+ S K L+G + AD +P K GC
Sbjct: 187 E-SGVQHKPSTLQGGRPNADNQPAKEGC 213
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 143/212 (67%), Gaps = 14/212 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++ +GK +K QIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ +++F+++ +WLNE+ ++ NV +LVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++R V+ GKALA+ G+ F+ETSA D++NV AF T+ EI N ++ Q
Sbjct: 126 AESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMA---------SQ 176
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++ TV + G+ ++ GCCSS
Sbjct: 177 PAANASKPATVQMRGQPV-----AQQNGCCSS 203
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDTA 71
Y FK+VL+GDS VGKSNL+ RF ++EF +SKSTIGVEF T+ + I + K VKAQIWDTA
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTA 60
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+R++ S+YYRGAVGALLVYD++ R +F+ + WL E+ +++ + + +LVGNK DL
Sbjct: 61 GQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDL 120
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+ R V +G++ A GL F+ETSALD++ V AFQ ++ EIY ++K
Sbjct: 121 HEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKK 171
>gi|328872576|gb|EGG20943.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 238
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/153 (59%), Positives = 119/153 (77%)
Query: 34 FARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLV 93
F R+EF +KSTIGVEF T+ ++ GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLV
Sbjct: 14 FTRNEFNLETKSTIGVEFATRSIETEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLV 73
Query: 94 YDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFF 153
YDI+++ T+ S+ RWL EL ++D N+ +LVGNK+DL+ REV+T E K AE L F
Sbjct: 74 YDIAKQATYKSVERWLTELRENADRNIEIMLVGNKNDLRHLREVSTDEAKDFAEKHKLSF 133
Query: 154 METSALDSSNVTAAFQTVVTEIYNILSRKVMIS 186
+ETSALDSSNV AFQT++T+I + ++R+ IS
Sbjct: 134 IETSALDSSNVEIAFQTILTQICHSMNRQPSIS 166
>gi|66823707|ref|XP_645208.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122057917|sp|Q559X6.1|RAB2B_DICDI RecName: Full=Ras-related protein Rab-2B
gi|60473275|gb|EAL71221.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
++LFK +++GDSAVGKSNLL +F F PNS TIGVEF ++ ++IN K++K QIWDTA
Sbjct: 22 EHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTA 81
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQE+FR++T AYYRGAV A++VYDI+RR +F+S+ WL + S +V T+L+GNK+DL
Sbjct: 82 GQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADL 141
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNIL-SRKVMISQE 188
+ R+V+T+E K AE GL F ETSA + NV AF+ +I L S ++S E
Sbjct: 142 EANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGLLSNE 199
>gi|195331895|ref|XP_002032634.1| GM20894 [Drosophila sechellia]
gi|194124604|gb|EDW46647.1| GM20894 [Drosophila sechellia]
Length = 200
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS+ N+V +L+GNKSDL
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM-ISQELKQ 191
REV EG+A A GL FMETSA ++NV AF EIY + V I+ E+++
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEVRK 184
Query: 192 K 192
K
Sbjct: 185 K 185
>gi|440297845|gb|ELP90486.1| rab11, putative [Entamoeba invadens IP1]
Length = 222
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 136/214 (63%), Gaps = 17/214 (7%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
+ +VV+IG+S VGKSNLL RF R+E+ P K TIGVEF T+ ++ +GK ++AQIWDTAG
Sbjct: 21 FSLEVVIIGESGVGKSNLLLRFTRNEYEPEKKFTIGVEFATRTIEYDGKTIRAQIWDTAG 80
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE++RA+T AYYRGA GA+ VYD+S++ TF +I RW+ EL +VV ++VGNKSDL+
Sbjct: 81 QEKYRAITDAYYRGAEGAVCVYDVSKKDTFTAIDRWMTELKAGCGDDVVIMIVGNKSDLE 140
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY-----NILSRKVMISQ 187
R+V +EG+ A+ FFMETSAL +NV AF ++ IY I K +Q
Sbjct: 141 QERDVKPSEGEEFAQRHNSFFMETSALTGNNVEKAFTELLVHIYKKKNTTITPEKTAETQ 200
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ +D + N K++ E KK CC
Sbjct: 201 KPSVEDRVNIN----------KQSSEEKKK--CC 222
>gi|34849826|gb|AAH58382.1| RAB2A, member RAS oncogene family [Mus musculus]
Length = 212
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEKAFINTAKEIY 168
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 140/211 (66%), Gaps = 15/211 (7%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++ +GK +K QIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ +++F+++ +WLNE+ ++ NV +LVGNKSDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D + V++ KA A+ G+ FMETSA ++SNV AF + EI N +
Sbjct: 126 SDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKN----------RMAS 175
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ ++S TV + G+ +KAGCCS
Sbjct: 176 QPANSARPATVQIRGQPVN-----QKAGCCS 201
>gi|395859792|ref|XP_003802215.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Otolemur
garnettii]
Length = 212
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 145/211 (68%), Gaps = 13/211 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS+VGKS LL RFA D + STIGV+F+ + ++++GK VK QIWDTA
Sbjct: 7 DYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWDTA 66
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ R++F+++ +WL+E+ ++ +V +LVGNK DL
Sbjct: 67 GQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQWLSEIDRYASDSVCKLLVGNKCDL 126
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D++ V T E KA AE+ G+ F+ETSA +S NV AF T+ +EI N M SQ +
Sbjct: 127 VDSKVVDTEEAKAFAESLGMNFLETSAKESINVETAFLTMSSEIKN-----KMASQPAAE 181
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
+ S+ V ++G+ + +++ CCS
Sbjct: 182 RKSTVH----VHMKGQP----IQQQQSSCCS 204
>gi|10946940|ref|NP_067493.1| ras-related protein Rab-2A [Mus musculus]
gi|1709998|sp|P53994.1|RAB2A_MOUSE RecName: Full=Ras-related protein Rab-2A
gi|1177547|emb|CAA64684.1| GTP-binding protein [Mus musculus]
gi|26347751|dbj|BAC37524.1| unnamed protein product [Mus musculus]
gi|74137386|dbj|BAE35742.1| unnamed protein product [Mus musculus]
gi|74183144|dbj|BAE22525.1| unnamed protein product [Mus musculus]
gi|74194509|dbj|BAE37298.1| unnamed protein product [Mus musculus]
gi|74198093|dbj|BAE35226.1| unnamed protein product [Mus musculus]
gi|74211806|dbj|BAE29254.1| unnamed protein product [Mus musculus]
gi|74222313|dbj|BAE26957.1| unnamed protein product [Mus musculus]
gi|112292939|dbj|BAF02847.1| Rab2A [Mus musculus]
gi|148673733|gb|EDL05680.1| RAB2, member RAS oncogene family [Mus musculus]
Length = 212
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|41393075|ref|NP_958862.1| ras-related protein Rab-2A [Danio rerio]
gi|27881912|gb|AAH44459.1| RAB2A, member RAS oncogene family [Danio rerio]
gi|182891762|gb|AAI65141.1| Rab2a protein [Danio rerio]
Length = 212
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|417398094|gb|JAA46080.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 267
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|213513554|ref|NP_001133505.1| ras-related protein Rab-2A [Salmo salar]
gi|197632081|gb|ACH70764.1| RAB2A, member RAS oncogene family [Salmo salar]
gi|209154270|gb|ACI33367.1| Ras-related protein Rab-2A [Salmo salar]
gi|223647330|gb|ACN10423.1| Ras-related protein Rab-2A [Salmo salar]
gi|223649324|gb|ACN11420.1| Ras-related protein Rab-2A [Salmo salar]
gi|223673215|gb|ACN12789.1| Ras-related protein Rab-2A [Salmo salar]
Length = 212
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 142/212 (66%), Gaps = 14/212 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++ +GK +K QIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ +++F+++ +WLNE+ ++ NV +LVGNK DL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
++R V+ GKALA+ G+ F+ETSA D++NV AF T+ EI N ++ Q
Sbjct: 126 AESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMA---------SQ 176
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ TV + G+ ++ GCCSS
Sbjct: 177 PAGNASKPATVQMRGQPV-----AQQNGCCSS 203
>gi|45382561|ref|NP_990559.1| ras-related protein Rab-2A [Gallus gallus]
gi|224046295|ref|XP_002198446.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Taeniopygia
guttata]
gi|82245348|sp|Q90965.1|RAB2A_CHICK RecName: Full=Ras-related protein Rab-2A
gi|664925|emb|CAA59004.1| GTP-binding protein [Gallus gallus]
gi|387017962|gb|AFJ51099.1| RAB2, member RAS oncogene family [Crotalus adamanteus]
Length = 212
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|432915657|ref|XP_004079196.1| PREDICTED: ras-related protein Rab-2A-like [Oryzias latipes]
Length = 212
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 116/172 (67%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
REV EG+A A GL FMETSA +SNV AF EIY + V
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVF 176
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 130/172 (75%), Gaps = 2/172 (1%)
Query: 7 EDRAEDY--LFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
+ R EDY L+K+VLIGDS VGK+N+L +F R EF +SK+TIGVEF ++ + ++ K +K
Sbjct: 2 QHRTEDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIK 61
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQER+RA+TSAYYRGAVGA+++YDI++ TF+++ +W+ EL ++D ++ ++
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMI 121
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
VGNK+D K R+V T A A+ G+ F+ETSA D +NV AF+ ++ +IY
Sbjct: 122 VGNKTDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIY 173
>gi|348531422|ref|XP_003453208.1| PREDICTED: ras-related protein Rab-2A-like [Oreochromis niloticus]
Length = 212
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 116/172 (67%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
REV EG+A A GL FMETSA +SNV AF EIY + V
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVF 176
>gi|550062|gb|AAA60241.1| GTP-binding protein [Homo sapiens]
Length = 212
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLMFMETSAKTASNVEEAFINTAKEIY 168
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 116/172 (67%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
REV EG+A A GL FMETSA +SNV AF EIY + V
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVF 176
>gi|392876326|gb|AFM86995.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|334314630|ref|XP_001379530.2| PREDICTED: ras-related protein Rab-2B-like [Monodelphis domestica]
Length = 272
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 115/164 (70%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
R+V EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|387914838|gb|AFK11028.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|4506365|ref|NP_002856.1| ras-related protein Rab-2A isoform a [Homo sapiens]
gi|50979323|ref|NP_001003318.1| ras-related protein Rab-2A [Canis lupus familiaris]
gi|197098732|ref|NP_001126581.1| ras-related protein Rab-2A [Pongo abelii]
gi|302564413|ref|NP_001180789.1| ras-related protein Rab-2A [Macaca mulatta]
gi|350535689|ref|NP_001233386.1| ras-related protein Rab-2A [Pan troglodytes]
gi|296226560|ref|XP_002758983.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Callithrix
jacchus]
gi|301759885|ref|XP_002915755.1| PREDICTED: ras-related protein Rab-2A-like [Ailuropoda melanoleuca]
gi|332213898|ref|XP_003256067.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Nomascus
leucogenys]
gi|390475645|ref|XP_003734991.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Callithrix
jacchus]
gi|402878329|ref|XP_003902845.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Papio anubis]
gi|403288788|ref|XP_003935569.1| PREDICTED: ras-related protein Rab-2A [Saimiri boliviensis
boliviensis]
gi|46577636|sp|P61019.1|RAB2A_HUMAN RecName: Full=Ras-related protein Rab-2A
gi|46577642|sp|P61105.1|RAB2A_CANFA RecName: Full=Ras-related protein Rab-2A
gi|75070519|sp|Q5R6B6.1|RAB2A_PONAB RecName: Full=Ras-related protein Rab-2A
gi|75075847|sp|Q4R4X6.1|RAB2A_MACFA RecName: Full=Ras-related protein Rab-2A
gi|20379036|gb|AAM21078.1|AF498930_1 small GTP binding protein RAB2A [Homo sapiens]
gi|35837|emb|CAA31411.1| unnamed protein product [Homo sapiens]
gi|164054|gb|AAA30888.1| GTP-binding protein (rab2) [Canis lupus familiaris]
gi|14286264|gb|AAH08929.1| RAB2A, member RAS oncogene family [Homo sapiens]
gi|54696258|gb|AAV38501.1| RAB2, member RAS oncogene family [Homo sapiens]
gi|55731983|emb|CAH92700.1| hypothetical protein [Pongo abelii]
gi|61358667|gb|AAX41604.1| RAB2 member RAS oncogene family [synthetic construct]
gi|67970120|dbj|BAE01404.1| unnamed protein product [Macaca fascicularis]
gi|67971014|dbj|BAE01849.1| unnamed protein product [Macaca fascicularis]
gi|119607233|gb|EAW86827.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607234|gb|EAW86828.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|189065426|dbj|BAG35265.1| unnamed protein product [Homo sapiens]
gi|261860492|dbj|BAI46768.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|312151824|gb|ADQ32424.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|335773365|gb|AEH58368.1| Ras-related protein Rab-2A-like protein [Equus caballus]
gi|343960663|dbj|BAK61921.1| ras-related protein Rab-2A [Pan troglodytes]
gi|380783321|gb|AFE63536.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|383408523|gb|AFH27475.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|384948552|gb|AFI37881.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|410218884|gb|JAA06661.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410260538|gb|JAA18235.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410305644|gb|JAA31422.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410355261|gb|JAA44234.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|417397207|gb|JAA45637.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|345306838|ref|XP_001513461.2| PREDICTED: ras-related protein Rab-2A-like [Ornithorhynchus
anatinus]
Length = 212
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|311253799|ref|XP_001926739.2| PREDICTED: ras-related protein Rab-2A [Sus scrofa]
gi|385281364|gb|AFI57834.1| ras-related protein Rab-2A [Capra hircus]
Length = 212
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|147902722|ref|NP_001085321.1| rab2b, member RAS oncogene family [Xenopus laevis]
gi|49257196|gb|AAH71068.1| MGC78967 protein [Xenopus laevis]
gi|83318342|gb|AAI08769.1| MGC78967 protein [Xenopus laevis]
Length = 215
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKPIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF + WL + HS N+V IL+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFSHLTSWLEDARQHSSSNMVIILIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
R+V+ EG+A A GL FMETSA S+NV AF EIY
Sbjct: 125 SRRDVSREEGEAFAREHGLIFMETSAKTSANVEEAFIDTAKEIY 168
>gi|242010199|ref|XP_002425860.1| RAB-2,4,14, putative [Pediculus humanus corporis]
gi|212509812|gb|EEB13122.1| RAB-2,4,14, putative [Pediculus humanus corporis]
Length = 212
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 116/164 (70%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL++ HS+ N+V +L+GNKSDL+
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLDDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA ++NV AF EIY
Sbjct: 125 IKREVKKEEGEAFAREHGLIFMETSAKTATNVEEAFINTAKEIY 168
>gi|91087587|ref|XP_971919.1| PREDICTED: similar to Rab-protein 2 CG3269-PA [Tribolium castaneum]
gi|270010699|gb|EFA07147.1| hypothetical protein TcasGA2_TC010138 [Tribolium castaneum]
Length = 213
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 116/164 (70%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL++ HS+ N+V +L+GNKSDL+
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLDDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA ++NV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIY 168
>gi|156119376|ref|NP_001095172.1| ras-related protein Rab-2A [Oryctolagus cuniculus]
gi|266878|sp|Q01971.1|RAB2A_RABIT RecName: Full=Ras-related protein Rab-2A
gi|1696|emb|CAA48208.1| tubulovesicle-membrane-associated GTP-binding protein [Oryctolagus
cuniculus]
Length = 212
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 141/212 (66%), Gaps = 15/212 (7%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++ +GK +K QIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ +++F+++ +WLNE+ ++ NV +LVGNKSDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D + V++ KA A+ G+ FMETSA +++NV AF + EI N +
Sbjct: 126 ADNKVVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMAAEIKN----------RMAS 175
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S++ TV + G+ +K+GCCSS
Sbjct: 176 QPSNNARPPTVQIRGQPVN-----QKSGCCSS 202
>gi|73535753|pdb|1Z0A|A Chain A, Gdp-Bound Rab2a Gtpase
gi|73535754|pdb|1Z0A|B Chain B, Gdp-Bound Rab2a Gtpase
gi|73535755|pdb|1Z0A|C Chain C, Gdp-Bound Rab2a Gtpase
gi|73535756|pdb|1Z0A|D Chain D, Gdp-Bound Rab2a Gtpase
Length = 174
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 9 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 68
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 69 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 128
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 129 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 172
>gi|26335369|dbj|BAC31385.1| unnamed protein product [Mus musculus]
Length = 168
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|354491201|ref|XP_003507744.1| PREDICTED: ras-related protein Rab-2B-like [Cricetulus griseus]
gi|344252330|gb|EGW08434.1| Ras-related protein Rab-2B [Cricetulus griseus]
Length = 216
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 5/213 (2%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM-ISQE--- 188
R+V EG+A A GL FMETSA + NV AF EIY + + + + E
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANG 184
Query: 189 LKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+K S + ++ D P +GCC
Sbjct: 185 IKIGPQQSISTSAGPNSSQRNSCDVGP-DSGCC 216
>gi|440494412|gb|ELQ76793.1| GTPase Rab11/YPT3, small G protein superfamily [Trachipleistophora
hominis]
Length = 207
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 121/166 (72%), Gaps = 1/166 (0%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGK+NLL++ R EF +K+TIGVEF T+ I+ +KAQIWDTA
Sbjct: 5 DYLFKIVLIGDSGVGKTNLLSQLTRKEFSAETKATIGVEFATKTFKIDSLVIKAQIWDTA 64
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTF-DSIGRWLNELHTHSDMNVVTILVGNKSD 130
GQER+RA+TSAYYRG +GAL+VYDI+R+ T ++ WL +L +S + +LVGNK+D
Sbjct: 65 GQERYRAITSAYYRGTLGALVVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMLVGNKTD 124
Query: 131 LKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
L+D R VT A G A++ L F+ETSALD SNV AF+ ++ +Y
Sbjct: 125 LEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFEELIKAVY 170
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 141/211 (66%), Gaps = 13/211 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ +++F+++ +WLNE+ ++ NV +LVGNKSDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ V A KA A+ G+ F+ETSA +++NV AF T+ EI N ++ + +S +
Sbjct: 126 ASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSST-SR 184
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
++ G+T++ K GCCS
Sbjct: 185 PNNVQLRGQTIL------------PKGGCCS 203
>gi|395502994|ref|XP_003755858.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Sarcophilus
harrisii]
Length = 216
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 115/164 (70%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
R+V EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 143/210 (68%), Gaps = 15/210 (7%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS+VGKS LL RFA D + + STIGV+F+ + +++ GK +K QIWDTA
Sbjct: 6 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQGKTIKLQIWDTA 65
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ ++F+++ +WLNE+ +++ +V +LVGNKSDL
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKSDL 125
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ + V T KA A+ G+ F+ETSA DS NV AF T+ EI +K M SQ
Sbjct: 126 VENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEI-----KKKMGSQP--- 177
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCC 221
+ S + +TV ++G+ P+K+ CC
Sbjct: 178 --TGSKSAETVQMKGQ-----PIPQKSNCC 200
>gi|1588651|prf||2209256A rab2 gene
Length = 220
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 145/212 (68%), Gaps = 14/212 (6%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIGDS+VGKS LL RFA D F STIGV+F+ + +D++GK VK QIWDTA
Sbjct: 8 DYLFKLLLIGDSSVGKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERFR +TS+YYRGA G ++VYD++ ++F++I +WL+E+ ++ NV +LVGNK DL
Sbjct: 68 GQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWLSEIDRYASDNVCKLLVGNKCDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
D++ V T + KA A++ G+ F+ETSA +S NV AF T+ +EI +K M +Q +
Sbjct: 128 VDSKVVETEKAKAFADSLGIPFIETSAKESINVEEAFLTMSSEI-----KKRMATQPTVE 182
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + V ++G+ + +K+ CCSS
Sbjct: 183 RRPTVH----VHMKGQPIQ-----QKSSCCSS 205
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 124/164 (75%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK++LIG+SAVGKS+LL RFA + F + TIGV+F+ + D+NGK VK QIWDTA
Sbjct: 8 DYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIWDTA 67
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQERF+ +T++YY+GA G +LVYD++ +Q+F + WL E+ +++ NVV +LVGNK DL
Sbjct: 68 GQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVLVGNKVDL 127
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
+ REVT+ EGK LA++ + F+ETSA +SSNV AF T+ EI
Sbjct: 128 ESKREVTSEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEI 171
>gi|260834761|ref|XP_002612378.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
gi|229297755|gb|EEN68387.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
Length = 214
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA ++NV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIY 168
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 8/192 (4%)
Query: 33 RFARDEFYPNSKSTIGVEFQTQKMDI-NGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL 91
RF RDEF SKSTIGVEF T+ + + N K +KAQIWDTAGQER+RA+TSAYYRGAVGAL
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 92 LVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGL 151
LVYDI+++ TF++I +WL EL ++D N+V +LVGNKSDLK R + + A+ + L
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDATQFAKKEKL 135
Query: 152 FFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFN--GKTVVLEGEKK 209
F+ETSAL+++NV AF ++ EIYN+ +K Q K +D+ + GK + ++ +
Sbjct: 136 AFIETSALEATNVELAFHQLLNEIYNVRQKK----QATKSEDNVNIQPRGKKINVDDDND 191
Query: 210 EADAEPKKAGCC 221
E + +P K CC
Sbjct: 192 ENEKKP-KTKCC 202
>gi|17137088|ref|NP_477090.1| Rab2, isoform A [Drosophila melanogaster]
gi|442622498|ref|NP_001260732.1| Rab2, isoform B [Drosophila melanogaster]
gi|194758098|ref|XP_001961299.1| GF11067 [Drosophila ananassae]
gi|194864038|ref|XP_001970739.1| GG23219 [Drosophila erecta]
gi|195474169|ref|XP_002089364.1| GE19072 [Drosophila yakuba]
gi|195580994|ref|XP_002080319.1| GD10420 [Drosophila simulans]
gi|2313035|dbj|BAA21706.1| rab2 [Drosophila melanogaster]
gi|21645117|gb|AAM70817.1| Rab2, isoform A [Drosophila melanogaster]
gi|27820101|gb|AAO25075.1| GH01619p [Drosophila melanogaster]
gi|190622597|gb|EDV38121.1| GF11067 [Drosophila ananassae]
gi|190662606|gb|EDV59798.1| GG23219 [Drosophila erecta]
gi|194175465|gb|EDW89076.1| GE19072 [Drosophila yakuba]
gi|194192328|gb|EDX05904.1| GD10420 [Drosophila simulans]
gi|220944512|gb|ACL84799.1| Rab2-PA [synthetic construct]
gi|220954388|gb|ACL89737.1| Rab2-PA [synthetic construct]
gi|440214116|gb|AGB93265.1| Rab2, isoform B [Drosophila melanogaster]
Length = 213
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS+ N+V +L+GNKSDL
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA ++NV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIY 168
>gi|125806738|ref|XP_001360146.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|195149123|ref|XP_002015507.1| GL11116 [Drosophila persimilis]
gi|195455130|ref|XP_002074572.1| GK23088 [Drosophila willistoni]
gi|54635317|gb|EAL24720.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|194109354|gb|EDW31397.1| GL11116 [Drosophila persimilis]
gi|194170657|gb|EDW85558.1| GK23088 [Drosophila willistoni]
Length = 213
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS+ N+V +L+GNKSDL
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLD 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA ++NV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIY 168
>gi|241999568|ref|XP_002434427.1| RAS-related protein, putative [Ixodes scapularis]
gi|215497757|gb|EEC07251.1| RAS-related protein, putative [Ixodes scapularis]
gi|442750147|gb|JAA67233.1| Putative gtpase rab2 small g protein superfamily [Ixodes ricinus]
Length = 212
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA ++NV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIY 168
>gi|440790656|gb|ELR11936.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 141/226 (62%), Gaps = 12/226 (5%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING---- 60
S+ DYL K+V++GDS VGKSN+++RF D F +SK+TIGV F T+ M +
Sbjct: 3 SDASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSNDS 62
Query: 61 -----KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTH 115
K+VK Q+WDTAGQER+RA++SAYYRGA GAL+VYDI+ R++ DSI +WL E+ +
Sbjct: 63 TKDCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEIDKY 122
Query: 116 SDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
+VV LVGNK DL + R V+ EGK +A + +FF+ETSA D++N+ AF ++ EI
Sbjct: 123 CTQDVVVTLVGNKLDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLIKEI 182
Query: 176 YNILSRKVMISQELKQKDSSSFNGKTVVLEGEKKEADAE-PKKAGC 220
I S + + K + + + E+ E+D P + GC
Sbjct: 183 --IQSNLSQANNDGKIAGKAPSDTGITLKPPEEPESDPNAPPQPGC 226
>gi|73977362|ref|XP_532625.2| PREDICTED: ras-related protein Rab-2B isoform 1 [Canis lupus
familiaris]
Length = 216
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
R+V EG+A A GL FMETSA + NV AF EIY
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIY 168
>gi|301784893|ref|XP_002927861.1| PREDICTED: ras-related protein Rab-2B-like [Ailuropoda melanoleuca]
gi|410961828|ref|XP_003987480.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Felis catus]
gi|281340558|gb|EFB16142.1| hypothetical protein PANDA_017701 [Ailuropoda melanoleuca]
Length = 216
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
R+V EG+A A GL FMETSA + NV AF EIY
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIY 168
>gi|13929006|ref|NP_113906.1| ras-related protein Rab-2A [Rattus norvegicus]
gi|131789|sp|P05712.1|RAB2A_RAT RecName: Full=Ras-related protein Rab-2A
gi|206555|gb|AAA42007.1| ras protein [Rattus norvegicus]
Length = 212
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P T+GVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|54696256|gb|AAV38500.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368765|gb|AAX43233.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 FRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|328869838|gb|EGG18213.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 200
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 117/164 (71%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
+LFK +++GDSAVGKSNLL +F F PNS TIGVEF ++ ++I+ +VK QIWDTAG
Sbjct: 25 HLFKYIMVGDSAVGKSNLLLQFVDKRFSPNSDFTIGVEFGSRSINIDNNQVKLQIWDTAG 84
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE+FR++T AYYRGAVGAL+VYDI+RR+TF+ + WL + +S +V +LVGNK DL+
Sbjct: 85 QEKFRSITRAYYRGAVGALIVYDITRRETFEGLANWLTDCRKYSSTDVTIVLVGNKCDLE 144
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
+R+V+ AE + A GL F ETSA SNV AF+ I+
Sbjct: 145 ASRQVSYAEASSFANEHGLLFFETSAKTGSNVDEAFEQTAKIIF 188
>gi|291403498|ref|XP_002718096.1| PREDICTED: RAB2B protein [Oryctolagus cuniculus]
Length = 215
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
R+V EG+A A GL FMETSA + NV AF EIY
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIY 168
>gi|54696254|gb|AAV38499.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368760|gb|AAX43232.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 113/164 (68%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK +IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAG
Sbjct: 5 YLFKYTIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
REV EG+A A GL FMETSA +SNV AF EIY
Sbjct: 125 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 121/161 (75%)
Query: 15 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQE 74
F VVLIGDS VGK+N+L+RFA DEF +SK+T+GVEF + + +N +KAQIWDTAGQE
Sbjct: 18 FVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQE 77
Query: 75 RFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDA 134
R+R++TSAYYRGAVGAL+VYDI+ R +F+++ WL+EL HSD ++V +L+GNK DL +
Sbjct: 78 RYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLANQ 137
Query: 135 REVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 175
R ++T E +A AE + F+ETSA + + + AF V+ +
Sbjct: 138 RSISTDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRL 178
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/148 (60%), Positives = 115/148 (77%), Gaps = 2/148 (1%)
Query: 16 KVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQER 75
++VLIGDS VGKSNLL+RF R+EF +SKSTIGVEF T+ + ++ K +K+QIWDTAGQER
Sbjct: 31 EIVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQER 90
Query: 76 FRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAR 135
+RA+TSAYYRGAVGALLVYDIS+ QT++++ RWL EL H+D N+V +LVGNKSDL+ R
Sbjct: 91 YRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLR 150
Query: 136 EVTTAEGKALAEAQGLFFMETSALDSSN 163
V T E K A+ + + ALDS +
Sbjct: 151 AVPTEEAKQFAKI--FRIVSSKALDSGD 176
>gi|149692180|ref|XP_001505211.1| PREDICTED: ras-related protein Rab-2B-like [Equus caballus]
gi|335775161|gb|AEH58479.1| Ras-related protein Rab-2B-like protein [Equus caballus]
Length = 216
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
R+V EG+A A GL FMETSA + NV AF EIY
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIY 168
>gi|431898744|gb|ELK07121.1| Ras-related protein Rab-2B [Pteropus alecto]
Length = 216
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
R+V EG+A A GL FMETSA + NV AF EIY
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIY 168
>gi|311261052|ref|XP_003128612.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Sus scrofa]
Length = 216
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 114/164 (69%)
Query: 13 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAG 72
YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 73 QERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLK 132
QE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 133 DAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 176
R+V EG+A A GL FMETSA + NV AF EIY
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIY 168
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,035,874,212
Number of Sequences: 23463169
Number of extensions: 107837697
Number of successful extensions: 423803
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16908
Number of HSP's successfully gapped in prelim test: 7615
Number of HSP's that attempted gapping in prelim test: 388218
Number of HSP's gapped (non-prelim): 25281
length of query: 223
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 86
effective length of database: 9,144,741,214
effective search space: 786447744404
effective search space used: 786447744404
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)