BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027465
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGK5|RAA5A_ARATH Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2
SV=1
Length = 221
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/224 (85%), Positives = 204/224 (91%), Gaps = 4/224 (1%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MAFYSE+D++EDYLFK+VLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
KE+KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTF SIGRWLNELHTHSDMNV
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
VTILVGNKSDLKD REV+TAEGKALAEAQGLFFMETSALDSSNV AAF+TVV EIYNILS
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 181 RKVMISQELKQKDSSSF-NGKTVVLEGEKKEADAEPKKAGCCSS 223
RKVM SQEL ++D +S NGK VV+ + E KK GCCSS
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVI---PSDGQGEFKKGGCCSS 221
>sp|P28187|RAA5C_ARATH Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1
SV=1
Length = 214
Score = 276 bits (706), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/217 (62%), Positives = 171/217 (78%), Gaps = 7/217 (3%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
+++R E+YLFK+V+IGDSAVGKSNLL R+AR+EF PNSK+TIGVEFQTQ M I+GKEVKA
Sbjct: 4 DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R TF+++GRWL+EL+THSD V +L+
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLI 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK DL+ R V+ EGK+LAE++GLFFMETSALDS+NV AF+ V+ EIY+ +SRK +
Sbjct: 124 GNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLN 183
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S K++ + N ++V K + K CCS
Sbjct: 184 SDSYKEE--LTVNRVSLV-----KNENEGTKTFSCCS 213
>sp|P19892|RAA5E_ARATH Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2
SV=1
Length = 218
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/221 (62%), Positives = 173/221 (78%), Gaps = 8/221 (3%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I GKEVK
Sbjct: 3 SDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TF+S+GRWL+EL HSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL++ R V+ EGKALAE +GLFF+ETSALDS+NV AF+ V+ +IYN +SRK +
Sbjct: 123 VGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAG--CCSS 223
S KD + N ++V K + A + +G CCSS
Sbjct: 183 NSDTY--KDELTVNRVSLV----KDDNSASKQSSGFSCCSS 217
>sp|Q9SIP0|RAA5D_ARATH Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=2
SV=1
Length = 219
Score = 273 bits (699), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 168/219 (76%), Gaps = 3/219 (1%)
Query: 5 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVK 64
S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF +SK+TIGVEFQTQ M+I GKEVK
Sbjct: 3 SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVK 62
Query: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF+S+GRWL+EL THSD V +L
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARML 122
Query: 125 VGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVM 184
VGNK DL+ R V+ EGKALAE +GLFFMETSALDS+NV AF+ V+ +IY +SRK +
Sbjct: 123 VGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182
Query: 185 ISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
S K + S V L + ++ + CCSS
Sbjct: 183 NSDTYKTELSMK---NRVSLVKDDNKSSTQGFGFSCCSS 218
>sp|Q9SRS5|RAA5B_ARATH Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2
SV=1
Length = 217
Score = 273 bits (697), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 168/217 (77%), Gaps = 4/217 (1%)
Query: 6 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
E+DR E+YLFK+VLIGDSAVGKSNLL+RF+RDEF NSK+TIGVEFQTQ ++I GKEVKA
Sbjct: 4 EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R TF+S+ RWL EL+TH D V +LV
Sbjct: 64 QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK DL+D R V+ EGKALAE +GLFFMETSALD++NV AF+ V+ EI+N +SRK++
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
S K + S + V L + +++ + CCS
Sbjct: 184 SDAYKAELSVN----RVSLVNNQDGSESSWRNPSCCS 216
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 268 bits (685), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/221 (58%), Positives = 172/221 (77%), Gaps = 3/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LARFAR+EF +SKSTIGVEFQT+ + I+ K V
Sbjct: 7 YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNK DL + R+V T + K AE +GLFF+ETSAL+++NV +AF TV+TEIYNI+++K
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186
Query: 184 MISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + E + +S+S +G+ +++ G +E A K+ CC +
Sbjct: 187 LAADESQGNGNSASLSGQKIIIPGPAQEIPA--KRNMCCQA 225
>sp|P25766|RLGP1_ORYSJ Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1
PE=2 SV=2
Length = 226
Score = 266 bits (681), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 166/222 (74%), Gaps = 5/222 (2%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y E + DY+FKVVLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ + V
Sbjct: 8 YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V +
Sbjct: 68 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL R V T + K AE + LFFMETSAL+S+NV AF TV+TEIY I+S+K
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187
Query: 184 MISQEL--KQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++ E +SS G +V+ G++ A P KA CC S
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEP---APPTKASCCMS 226
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 262 bits (670), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/223 (57%), Positives = 167/223 (74%), Gaps = 6/223 (2%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
F S ++ DY+FKVVLIGDSAVGKS LLARF+R+EF SK+TIGVEFQT+ ++I+ K
Sbjct: 4 FQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
+KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL H+D N+V
Sbjct: 64 IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK+DL R V T + K A+ + LFFMETSALDS+NV +F TV+TEIY I+S+K
Sbjct: 124 MLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKK 183
Query: 183 VMISQELKQK--DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+++ E + DSS G +V+ GE + E K GCC +
Sbjct: 184 NLVANEEGESGGDSSLLQGTKIVVAGE----ETESKGKGCCGT 222
>sp|Q9SMQ6|RAA4B_ARATH Ras-related protein RABA4b OS=Arabidopsis thaliana GN=RABA4B PE=2
SV=1
Length = 224
Score = 262 bits (669), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 164/212 (77%), Gaps = 3/212 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DY+FKVVLIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RAVTSAYYRGAVGA+LVYD+++R+TF+ I RWL EL H+D N+V IL+GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+D R V T + K AE +GLFF+ETSAL+++NV +F T++T+IYN +++K + S E
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLAS-EGDS 193
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ S GK +++ G +E A K + CC+S
Sbjct: 194 NNPGSLAGKKILIPGSGQEIPA--KTSTCCTS 223
>sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1
Length = 222
Score = 262 bits (669), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 169/221 (76%), Gaps = 4/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 5 YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSV 64
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V +
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIM 124
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNK+DL+D R V T + K A+ +GLFF+ETSA++++N+ AF TV+TEI+NI+++K
Sbjct: 125 LIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKN 184
Query: 184 MISQELKQK-DSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + + + + +S GK +++ G + P+K CCSS
Sbjct: 185 LAADDNQSNGNPASLTGKKILVPGPGQ---VIPEKKACCSS 222
>sp|Q9FJN8|RAA4A_ARATH Ras-related protein RABA4a OS=Arabidopsis thaliana GN=RABA4A PE=2
SV=1
Length = 226
Score = 261 bits (666), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 166/226 (73%), Gaps = 12/226 (5%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGKS +LAR+ARDEF +SK+TIGVEFQT+ + I+ K V
Sbjct: 7 YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI+RRQTFD I RWL EL H+D N+V I
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L+GNKSDL D R + T + K AE +GLFF+ETSA +++NV +AF TV+TEI+NI+++K
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186
Query: 184 MISQELKQKDSSSFNGKTVVLEGEKKEADAEP------KKAGCCSS 223
+ + E ++ NG L G+K + P K CC+S
Sbjct: 187 LAASEDQE------NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 258 bits (660), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 164/217 (75%), Gaps = 9/217 (4%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDLK R V+ +G+ALAE +GL F+ETSAL++ N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEP-KKAGCCSS 223
E SS+ G+ + ADA ++ CCS+
Sbjct: 186 EA----SSNLPGQGTTI----NVADASANQRRSCCST 214
>sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1
Length = 222
Score = 258 bits (658), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 165/221 (74%), Gaps = 4/221 (1%)
Query: 4 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Y + + DY+FKVVLIGDSAVGK+ +LARFAR+EF +SK+TIGVEFQT+ + I K V
Sbjct: 5 YGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 64
Query: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
KAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL H+D N+V +
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIM 124
Query: 124 LVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 183
L GNK+DL+D R V T + K A+ +GLFF+ETSA++++ + AF TV+TEI+NI+++K
Sbjct: 125 LTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKN 184
Query: 184 MISQELK-QKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ + E + + +S GK +++ G P K CCSS
Sbjct: 185 LAADENQSNSNPASLTGKKILVPG---PGQVIPGKKACCSS 222
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 257 bits (657), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 161/217 (74%), Gaps = 7/217 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ +G AL+E +GL F+ETSAL+++N+ AFQT++TEIY+I+S+K + +Q
Sbjct: 126 KSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPK-KAGCCSS 223
E S G T+ + AD K GCCS+
Sbjct: 186 EATAGASVPGQGTTINV------ADTSGNTKKGCCST 216
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 253 bits (645), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 161/211 (76%), Gaps = 4/211 (1%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 69
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ TF+++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDL 129
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
K R+V T +A E +GL F+ETSAL+S+NV AFQ ++TEIY+I+S+KV+ S++ +
Sbjct: 130 KHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRP 189
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
K G+ V++ + D KK GCCS
Sbjct: 190 KIGE---GRDVIVI-DNAHDDGGKKKGGCCS 216
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 160/216 (74%), Gaps = 7/216 (3%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF+++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V +G++LAE +GL F+ETSAL+++N+ AFQT+++EIY+I+S+K + +Q
Sbjct: 126 KSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + + G+ + A + GCCS+
Sbjct: 186 EA----AGNLPGQGTAINISDSSA---TNRKGCCST 214
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 164/224 (73%), Gaps = 11/224 (4%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ +++N
Sbjct: 1 MAGYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNE 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T + K+ AE + L+FMETSAL+S+NV AF V+T+IY+++S
Sbjct: 120 VVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP-KKAGCCSS 223
+K M + E DS + K GEK + D KK GCCS+
Sbjct: 180 KKAMEAGE----DSGNVPSK-----GEKIDVDVSAVKKTGCCSN 214
>sp|P62494|RB11A_RAT Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1
SV=3
Length = 216
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>sp|P62493|RB11A_RABIT Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2
SV=3
Length = 216
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>sp|Q5R9M7|RB11A_PONAB Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3
Length = 216
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3
Length = 216
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3
Length = 216
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3
Length = 216
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>sp|P62490|RB11A_CANFA Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3
Length = 216
Score = 251 bits (640), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1
Length = 216
Score = 250 bits (639), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALDS+NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +PK CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKPKMQ-CCQN 215
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 249 bits (636), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 163/220 (74%), Gaps = 15/220 (6%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKA
Sbjct: 6 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNKSDL+ V T EGKA AE + L+FMETSAL+S+NV AF V+T+IY I+S++ +
Sbjct: 126 GNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVE 185
Query: 186 SQELKQKDSSSFNGKTVVLEGEK---KEADAEPKKAGCCS 222
+ + D+ S GK GEK K+ + KK GCCS
Sbjct: 186 AGD----DAGSGPGK-----GEKINIKDDVSAVKKGGCCS 216
>sp|Q9LH50|RAA4D_ARATH Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1
SV=1
Length = 222
Score = 248 bits (634), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 163/220 (74%), Gaps = 5/220 (2%)
Query: 3 FYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKE 62
Y + ++ DY+FKVVLIGDSAVGK+ LLARFAR+EF +SK+TIGVEFQT+ + I+ K
Sbjct: 4 LYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKT 63
Query: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYD+++RQ+FD + +WL EL H+D N+V
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVI 123
Query: 123 ILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
+L+GNK DL R V T + + A+ + LFFMETSAL+++NV AF T++TEIY I+S+K
Sbjct: 124 MLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKK 183
Query: 183 VMISQELKQKDSSS-FNGKTVVLEGEKKEADAEPKKAGCC 221
+ + + +SS G +++ E++ K+ GCC
Sbjct: 184 SLTADDDDADGNSSLLKGTRIIIPSEQESG----KRGGCC 219
>sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3
Length = 216
Score = 248 bits (634), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 157/212 (74%), Gaps = 5/212 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE GL F+ETSALD +NV AAFQT++TEIY I+S+K M + ++
Sbjct: 129 RHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQM--SDRRE 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
D S N VV + +P K CC +
Sbjct: 187 NDMSPSNN--VVPIHVPPTTENKP-KVQCCQN 215
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 163/226 (72%), Gaps = 13/226 (5%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y ED DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + ++G
Sbjct: 1 MAGYRVEDDY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF+++ RWL EL H+D N+
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T +GK+ AE + L FMETSAL+++NV AF V+T+IY I S
Sbjct: 120 VVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEP---KKAGCCSS 223
+K + + E +G V +GEK E + KK GCCS+
Sbjct: 180 KKQVEAGE---------DGNASVPKGEKIEVKNDVSALKKLGCCSN 216
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 247 bits (631), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 165/223 (73%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++I+
Sbjct: 1 MAGYRADDEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDN 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R T++++ RWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T E K LAE +GL+FMETSAL+++NV AF +T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + + + S+ G+T+ + K+ + KK GCCSS
Sbjct: 180 KKAVEAGDEGATSSAPPKGETINI----KDEGSSWKKFGCCSS 218
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 246 bits (629), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 162/217 (74%), Gaps = 6/217 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D YLFK+VLIGDS VGKSN+L+RF R+ F +SKSTIGVEF T+ + + GK +KAQI
Sbjct: 6 DHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQ+FD++ RWL EL H+D ++V ++VGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDL R V+ EGKALAE +GLFF+ETSA+++ NV AFQT++TE+Y I++RK + ++
Sbjct: 126 KSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAK 185
Query: 188 ELKQKDSS-SFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + GKT+ + ++ A K CCS+
Sbjct: 186 EAAAASAPLPSQGKTISI-----DSAAGNTKRACCSA 217
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 163/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA E+D DYLFK+VLIGDS VGK+N+L+RF R+EF SKSTIGVEF T+ + + G
Sbjct: 1 MAHRVEQDY--DYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+
Sbjct: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNI 118
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V ++ GNK+DL R V +G+ LAE +GL F+ETSAL+++NV AFQTV+ EIY+I+S
Sbjct: 119 VIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIIS 178
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + +QE +S+ T + E + K GCCS+
Sbjct: 179 KKALAAQEAAAANSAIPGQGTTI----NVEDTSGAGKRGCCST 217
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 244 bits (623), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 163/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAAYRADDEY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V + VGNK+DL+ R V+T + KA AE + FFMETSAL+S NV AF V+++IY ++S
Sbjct: 120 VIMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
RK + ++ ++ G+T+ + G K + A KK GCCS+
Sbjct: 180 RKAL---DIGDDPAALPKGQTINV-GSKDDVSA-VKKVGCCSN 217
>sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1
Length = 218
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 162/223 (72%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I+G
Sbjct: 1 MAGYKADDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++ GRWL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V+T +GKA AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + + + G+T+ + E + + CCS+
Sbjct: 180 KRAVEAGDRPSTSVVPSQGQTINV----NEDSSVLNRYRCCSN 218
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 243 bits (620), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC S
Sbjct: 188 DESP---GNNVVDISVPPTTDGQRPNKLQCCQS 217
>sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1
Length = 216
Score = 243 bits (620), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 158/216 (73%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQI
Sbjct: 6 DHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALL YDI++RQTFD++ RWL EL H D N+V IL GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
KSDLK R V+ + +AL + +GL F+ETSAL++ NV AFQT++T+IY+I+S+K + +Q
Sbjct: 126 KSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQ 185
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E + G T+ + ++ K GCCS+
Sbjct: 186 EAAASTALPGQGTTINVSD-----NSANVKRGCCST 216
>sp|Q96283|RAA2C_ARATH Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2
SV=4
Length = 217
Score = 243 bits (619), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 143/175 (81%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D+ DYLFK+VLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + GK +KAQI
Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRK 182
KSDL R V +G++LAE +GL F+ETSAL+++NV AFQT++ EIY+I+S+K
Sbjct: 126 KSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 243 bits (619), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 161/218 (73%), Gaps = 9/218 (4%)
Query: 9 RAED---YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKA 65
RAED YLFK+VLIGDS VGKSNLL+RF+R+EF SKSTIGVEF T+ + ++ K VKA
Sbjct: 6 RAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKA 65
Query: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
QIWDTAGQER+RA+TSAYYRGAVGAL+VYDI+R TF+++ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLV 125
Query: 126 GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMI 185
GNK+DL+ R V+T + KA AE + FFMETSAL+S NV AF V+TEIY ++ RK +
Sbjct: 126 GNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKAL- 184
Query: 186 SQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
E+ ++ G+T+ + K+ + KK GCCSS
Sbjct: 185 --EVGDDPAALPKGQTINV---GKDDVSAVKKVGCCSS 217
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/223 (53%), Positives = 162/223 (72%), Gaps = 5/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
M Y +D DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MGGYRTDDEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDA 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++RR TF++ RWL EL H+D N+
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNKSDL+ V T +GK+ AE + L+FMETSAL+++NV AF V+T+IY I+S
Sbjct: 120 VVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + + + G+T+ + KE + K+ GCCS+
Sbjct: 180 KRAVEAGDSGSSSGLPSKGQTINV----KEDSSVLKRFGCCST 218
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 217
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 217
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K I+
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIADRAAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + P K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKPNKLQCCQN 217
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 159/216 (73%), Gaps = 5/216 (2%)
Query: 8 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + G+ VKAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
WDTAGQER+RA+TSAYYRGA+GALLVYD+++ TF+++ RWL EL H+D N+V +L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGN 125
Query: 128 KSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQ 187
K+DLK R V T + ++ AE +GL F+ETSAL++ NV AFQT+++E+Y I+S+K IS
Sbjct: 126 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK-SISS 184
Query: 188 ELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+ +++ G+T+ + + +P CCSS
Sbjct: 185 DQTTANANIKEGQTIDVAATSESNAKKP----CCSS 216
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 240 bits (612), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 153/211 (72%), Gaps = 5/211 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K +KAQ+WDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+R TF+++ RWL EL H+D NVV +LVGNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E ++ +E + +FFMETSALD++NV AF V+T+IY ++SRK +
Sbjct: 131 RHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDG----T 186
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPKKAGCCS 222
D S + G K + A K +GCCS
Sbjct: 187 GDPMSLPKGQTIDIGNKDDVTA-VKSSGCCS 216
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 152/213 (71%), Gaps = 5/213 (2%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 68
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDL 128
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ R V T E +A AE L F+ETSALDS+NV AF+ ++TEIY I+S+K IS
Sbjct: 129 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QISDRSAH 187
Query: 192 KDSSSFNGKTVVLEGEKKEADAE-PKKAGCCSS 223
+S G VV D + K CC +
Sbjct: 188 DESP---GNNVVDISVPPTTDGQKSNKLQCCQN 217
>sp|P36412|RB11A_DICDI Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A
PE=1 SV=1
Length = 214
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 154/212 (72%), Gaps = 10/212 (4%)
Query: 12 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
DYL+K+VLIGDS VGKSNLL+RF R+EF +KSTIGVEF T+ + GK +KAQ+WDTA
Sbjct: 11 DYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTA 70
Query: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
GQER+RA+TSAYYRGAVGALLVYDI+++ T+ S+ RW+ EL ++D N+ +LVGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDL 130
Query: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQ 191
+ REV+T E K +E L F+ETSALDSSNV AFQ ++T+IY+I+SR +
Sbjct: 131 RHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTGPQTT 190
Query: 192 KDSSSFNGKTVVLEGEKKEADAEPK--KAGCC 221
DS N +T++L +EP K+GCC
Sbjct: 191 IDS---NTETIIL-----PTTSEPPAAKSGCC 214
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 238 bits (606), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 164/223 (73%), Gaps = 6/223 (2%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D D+L+KVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAAYRADDDY-DFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDE 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H++ N+
Sbjct: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNK+DL+ R V+T + KA AE + FFMETSAL++ NV AF V+++IY + S
Sbjct: 120 VIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVAS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
+K + ++ ++ G+++ + G K + +E KK GCCSS
Sbjct: 180 KKAL---DIGDDHTTLPKGQSINV-GSKDDV-SEVKKVGCCSS 217
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 238 bits (606), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 164/227 (72%), Gaps = 15/227 (6%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y +D DYLFKVVLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ ++++
Sbjct: 1 MAGYRADDEY-DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDD 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ WL EL H+D N+
Sbjct: 60 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +LVGNKSDL+ V T + K+ AE + L+FMETSAL+++NV AF V+T+I++I+S
Sbjct: 120 VVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEK----KEADAEPKKAGCCSS 223
+K M + S S N V +G+K K+ A KK GCCS+
Sbjct: 180 KKAM------EAASESAN---VPSKGDKIDIGKDVSA-VKKGGCCSN 216
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 236 bits (602), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 161/222 (72%), Gaps = 6/222 (2%)
Query: 2 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
A+ +E+D DYLFKVVL GDS VGKSNLL+RF R++F +S++TIGVEF T+ + + K
Sbjct: 3 AYRAEDDY--DYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVV 121
VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 122 TILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 181
+LVGNK+DL+ R ++T E KA AE + FFMETSAL++ NV AF V+T+IY ++S+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 182 KVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
K + E +++ ++ G + + A KK GCCS+
Sbjct: 181 KAL---EAGDDPTTALPKGQMINVGGRDDISA-VKKPGCCSA 218
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 156/223 (69%), Gaps = 7/223 (3%)
Query: 1 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
MA Y D DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + G
Sbjct: 1 MAGY-RADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEG 59
Query: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
K VKAQIWDTAGQER+RA+TSAYYRGAVGALL+YD++R TF++ RWL EL H+D N+
Sbjct: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNI 119
Query: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 180
V +L+GNK DL+ V T E KA AE + L+FMETSALD++NV AF V+T+I+ I+S
Sbjct: 120 VVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVS 179
Query: 181 RKVMISQELKQKDSSSFNGKTVVLEGEKKEADAEPKKAGCCSS 223
++ + +S+ GK + KE + K+ GCCS+
Sbjct: 180 KRSVDG----GGESADLPGKGETI--NVKEDGSVLKRMGCCSN 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,894,910
Number of Sequences: 539616
Number of extensions: 2641648
Number of successful extensions: 12412
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 10652
Number of HSP's gapped (non-prelim): 1239
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)