Query 027467
Match_columns 223
No_of_seqs 142 out of 1235
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 17:23:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027467.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027467hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p8k_A Hydrolase, carbon-nitro 100.0 3.1E-45 1E-49 301.0 20.5 192 1-211 87-281 (281)
2 3hkx_A Amidase; alpha-beta-BET 100.0 1.6E-45 5.3E-50 303.0 15.8 195 1-214 88-283 (283)
3 2vhh_A CG3027-PA; hydrolase; 2 100.0 2E-44 6.7E-49 309.4 19.3 210 1-216 152-372 (405)
4 3ivz_A Nitrilase; alpha-beta s 100.0 1E-44 3.5E-49 295.1 16.0 188 1-211 72-261 (262)
5 1f89_A 32.5 kDa protein YLR351 100.0 1.9E-43 6.5E-48 291.6 18.5 198 1-213 83-288 (291)
6 1uf5_A N-carbamyl-D-amino acid 100.0 2.7E-43 9.1E-48 292.2 19.3 207 1-215 80-302 (303)
7 2w1v_A Nitrilase-2, nitrilase 100.0 1.7E-43 5.8E-48 289.9 17.7 198 1-213 69-272 (276)
8 2e11_A Hydrolase; dimethylarse 100.0 7.3E-44 2.5E-48 290.6 14.6 192 1-211 68-265 (266)
9 1ems_A Nitfhit, NIT-fragIle hi 100.0 5.4E-41 1.8E-45 291.6 13.3 201 1-216 81-291 (440)
10 2dyu_A Formamidase; AMIF, CEK, 100.0 9.4E-39 3.2E-43 268.2 21.1 182 1-202 88-273 (334)
11 2uxy_A Aliphatic amidase; nitr 100.0 1.7E-38 5.8E-43 267.3 20.8 180 1-201 87-272 (341)
12 3n05_A NH(3)-dependent NAD(+) 100.0 3.1E-36 1E-40 269.8 16.9 177 1-192 70-263 (590)
13 3ilv_A Glutamine-dependent NAD 100.0 6.7E-36 2.3E-40 269.0 16.4 200 1-214 71-291 (634)
14 4f4h_A Glutamine dependent NAD 100.0 8E-35 2.7E-39 258.7 18.2 190 8-214 83-288 (565)
15 3sdb_A Glutamine-dependent NAD 100.0 1.6E-34 5.3E-39 261.5 15.7 193 1-207 81-295 (680)
16 3p8k_A Hydrolase, carbon-nitro 77.5 7.3 0.00025 30.7 7.1 75 90-174 47-127 (281)
17 3ivz_A Nitrilase; alpha-beta s 74.6 9.9 0.00034 29.5 7.1 75 88-174 26-110 (262)
18 3hkx_A Amidase; alpha-beta-BET 74.5 8.2 0.00028 30.5 6.7 77 88-174 45-128 (283)
19 2w1v_A Nitrilase-2, nitrilase 74.1 7.6 0.00026 30.4 6.4 77 88-174 27-109 (276)
20 1ems_A Nitfhit, NIT-fragIle hi 73.6 10 0.00035 32.0 7.4 79 88-175 38-125 (440)
21 2vhh_A CG3027-PA; hydrolase; 2 72.1 18 0.00062 30.3 8.5 79 88-174 104-194 (405)
22 2dyu_A Formamidase; AMIF, CEK, 62.6 15 0.00052 29.8 6.0 73 95-174 51-130 (334)
23 1uf5_A N-carbamyl-D-amino acid 62.5 13 0.00046 29.3 5.6 81 88-174 30-123 (303)
24 4eo3_A Bacterioferritin comigr 60.8 10 0.00035 30.7 4.6 22 25-46 102-123 (322)
25 2e11_A Hydrolase; dimethylarse 56.9 18 0.00062 28.0 5.3 68 94-172 33-105 (266)
26 1f89_A 32.5 kDa protein YLR351 56.1 21 0.00071 28.0 5.6 79 88-174 35-125 (291)
27 1o7j_A L-asparaginase; atomic 46.0 1.1E+02 0.0036 24.8 8.4 65 72-144 217-281 (327)
28 1wsa_A Asparaginase, asparagin 44.9 85 0.0029 25.4 7.7 65 72-144 215-279 (330)
29 3me7_A Putative uncharacterize 44.8 13 0.00046 26.5 2.6 18 27-44 129-146 (170)
30 2wlt_A L-asparaginase; hydrola 44.6 85 0.0029 25.4 7.6 65 72-144 218-282 (332)
31 1nns_A L-asparaginase II; amid 43.5 1.2E+02 0.0042 24.4 8.4 65 72-144 211-275 (326)
32 2ggt_A SCO1 protein homolog, m 43.2 48 0.0016 22.8 5.4 16 27-42 129-144 (164)
33 3tue_A Tryparedoxin peroxidase 42.9 35 0.0012 26.0 4.7 31 3-39 131-161 (219)
34 3gkn_A Bacterioferritin comigr 42.8 25 0.00084 24.5 3.8 17 25-41 125-141 (163)
35 3nxk_A Cytoplasmic L-asparagin 40.9 77 0.0026 25.8 6.8 64 72-143 220-284 (334)
36 3ixr_A Bacterioferritin comigr 40.1 30 0.001 24.9 3.9 16 26-41 142-157 (179)
37 2rli_A SCO2 protein homolog, m 39.8 45 0.0015 23.2 4.8 16 27-42 132-147 (171)
38 2him_A L-asparaginase 1; hydro 39.7 72 0.0025 26.2 6.5 66 72-144 229-295 (358)
39 2v2f_A Penicillin binding prot 39.4 15 0.00053 17.4 1.5 17 160-176 5-21 (26)
40 2fyw_A Conserved hypothetical 38.4 1.1E+02 0.0039 23.7 7.3 59 76-139 40-100 (267)
41 2yyb_A Hypothetical protein TT 38.0 1.1E+02 0.0039 23.3 7.1 57 76-139 38-96 (242)
42 2gx8_A NIF3-related protein; s 37.6 95 0.0032 26.0 6.9 59 76-139 66-126 (397)
43 3sbc_A Peroxiredoxin TSA1; alp 36.1 50 0.0017 25.1 4.6 29 3-37 127-155 (216)
44 4gqc_A Thiol peroxidase, perox 32.9 33 0.0011 24.3 3.1 15 27-41 123-137 (164)
45 4hde_A SCO1/SENC family lipopr 31.8 43 0.0015 23.8 3.6 19 27-45 136-154 (170)
46 1agx_A Glutaminase-asparaginas 31.4 1.5E+02 0.005 24.0 7.0 64 72-143 215-279 (331)
47 1f6y_A 5-methyltetrahydrofolat 30.5 96 0.0033 24.1 5.6 55 75-141 68-124 (262)
48 2nyd_A UPF0135 protein SA1388; 30.3 1.1E+02 0.0036 25.4 6.0 58 76-139 42-101 (370)
49 1zq1_A Glutamyl-tRNA(Gln) amid 30.2 1.5E+02 0.0053 25.0 7.1 65 72-144 304-368 (438)
50 3g12_A Putative lactoylglutath 29.7 75 0.0026 21.0 4.4 37 4-43 83-120 (128)
51 1nmo_A Hypothetical protein YB 28.9 1.7E+02 0.006 22.3 6.8 58 76-139 37-96 (247)
52 3ewl_A Uncharacterized conserv 28.6 1.3E+02 0.0044 19.8 6.6 15 159-173 110-124 (142)
53 4g2e_A Peroxiredoxin; redox pr 28.4 44 0.0015 23.3 3.1 15 27-41 121-135 (157)
54 2i81_A 2-Cys peroxiredoxin; st 27.8 80 0.0027 23.4 4.6 17 25-41 142-158 (213)
55 2d6f_A Glutamyl-tRNA(Gln) amid 27.6 1.6E+02 0.0054 25.0 6.7 65 72-144 301-365 (435)
56 4avf_A Inosine-5'-monophosphat 27.4 2.3E+02 0.0078 24.2 7.9 33 73-105 218-250 (490)
57 4fxs_A Inosine-5'-monophosphat 27.2 2.9E+02 0.01 23.6 10.4 70 25-105 182-252 (496)
58 3p7x_A Probable thiol peroxida 27.2 46 0.0016 23.3 3.0 19 25-43 129-147 (166)
59 2vef_A Dihydropteroate synthas 27.1 1.1E+02 0.0039 24.5 5.6 52 75-139 84-135 (314)
60 2yci_X 5-methyltetrahydrofolat 26.9 1E+02 0.0034 24.2 5.1 55 75-141 77-133 (271)
61 1oi7_A Succinyl-COA synthetase 26.7 1.5E+02 0.0051 23.3 6.2 77 85-171 77-156 (288)
62 2yv1_A Succinyl-COA ligase [AD 26.5 1.2E+02 0.0042 23.9 5.6 76 86-171 84-162 (294)
63 2yv2_A Succinyl-COA synthetase 26.3 1.2E+02 0.0042 24.0 5.6 52 85-146 84-135 (297)
64 2v2g_A Peroxiredoxin 6; oxidor 24.9 1E+02 0.0035 23.3 4.8 17 25-41 127-143 (233)
65 4pga_A Glutaminase-asparaginas 24.9 1.6E+02 0.0053 24.0 6.1 63 72-143 221-285 (337)
66 2jsy_A Probable thiol peroxida 24.7 69 0.0024 22.2 3.6 17 26-42 129-145 (167)
67 2pn8_A Peroxiredoxin-4; thiore 24.5 1.1E+02 0.0037 22.6 4.8 18 24-41 138-155 (211)
68 2h01_A 2-Cys peroxiredoxin; th 24.3 98 0.0034 22.1 4.5 17 25-41 121-137 (192)
69 4evm_A Thioredoxin family prot 23.2 63 0.0021 21.0 3.0 18 25-42 105-122 (138)
70 3tr9_A Dihydropteroate synthas 23.0 94 0.0032 25.1 4.3 57 75-145 104-160 (314)
71 1xcc_A 1-Cys peroxiredoxin; un 22.8 1.1E+02 0.0039 22.7 4.6 17 25-41 128-144 (220)
72 1psq_A Probable thiol peroxida 22.8 63 0.0021 22.5 3.0 17 26-42 127-143 (163)
73 1xzo_A BSSCO, hypothetical pro 22.6 55 0.0019 22.7 2.7 18 26-43 137-154 (174)
74 3dwv_A Glutathione peroxidase- 22.0 36 0.0012 24.5 1.6 16 27-42 151-166 (187)
75 3uhj_A Probable glycerol dehyd 22.0 2.8E+02 0.0095 22.8 7.2 81 88-190 98-179 (387)
76 2nu8_A Succinyl-COA ligase [AD 21.9 1.7E+02 0.0057 23.0 5.6 52 84-145 76-127 (288)
77 1aj0_A DHPS, dihydropteroate s 21.7 2E+02 0.0067 22.7 5.9 57 75-145 89-145 (282)
78 3drn_A Peroxiredoxin, bacterio 21.2 68 0.0023 22.2 2.9 19 25-43 111-129 (161)
79 3keb_A Probable thiol peroxida 21.0 70 0.0024 24.3 3.1 18 25-42 137-154 (224)
80 3qpm_A Peroxiredoxin; oxidored 20.9 1.4E+02 0.0047 22.6 4.8 17 25-41 168-184 (240)
81 2bmb_A Folic acid synthesis pr 20.6 3.5E+02 0.012 23.6 7.6 58 75-145 310-368 (545)
82 3mcm_A 2-amino-4-hydroxy-6-hyd 20.6 89 0.0031 26.5 3.9 58 75-145 268-327 (442)
83 3r6a_A Uncharacterized protein 20.5 1.8E+02 0.0063 19.6 5.1 38 3-43 81-118 (144)
84 2yzh_A Probable thiol peroxida 20.3 67 0.0023 22.5 2.7 18 25-42 133-150 (171)
85 1q98_A Thiol peroxidase, TPX; 20.3 68 0.0023 22.4 2.7 17 26-42 131-147 (165)
No 1
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.1e-45 Score=300.95 Aligned_cols=192 Identities=23% Similarity=0.430 Sum_probs=176.5
Q ss_pred CHHHHHHcCcEEeeeee-eecCCceeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCCc-ceEee-CCceEEE
Q 027467 1 MQELAKELGVVMPVSFF-EEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF-KVFQT-KFAKIGV 77 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~~-~~~~~~~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~~-~~~~~-~~~~ig~ 77 (223)
|+++|++++++|++|++ ++.++++||++++|+|+|++++.|+|+||++. |.|..+|.+|+. . .+|++ +++|||+
T Consensus 87 l~~la~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~--f~E~~~f~~G~~-~~~v~~~~~~~~ig~ 163 (281)
T 3p8k_A 87 IKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPM--LREHEFLTAGEY-VAEPFQLSDGTYVTQ 163 (281)
T ss_dssp HHHHHHHHTCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEECSCCCTT--TTGGGTCCCCSS-CCCCEECTTCCEEEE
T ss_pred HHHHHhhCCeEEEEeeeEEccCCcEEEEEEEEcCCCeEEEEEeeEECCCC--cCccccCcCCCC-CceeEEeCCCcEEEE
Confidence 46899999999999975 66788999999999999999999999999863 579999999996 6 89999 9999999
Q ss_pred EEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCccee
Q 027467 78 AICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQIT 157 (223)
Q Consensus 78 ~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~~ 157 (223)
+||||++|||+++.++.+|+|+|++|++|+. ....+|..+.++||+||++||+.||++|... +..
T Consensus 164 ~IC~D~~fpe~~r~~~~~Gadli~~psa~~~-------~~~~~~~~~~~arA~en~~~vv~~n~~G~~~--------~~~ 228 (281)
T 3p8k_A 164 LICYDLRFPELLRYPARSGAKIAFYVAQWPM-------SRLQHWHSLLKARAIENNMFVIGTNSTGFDG--------NTE 228 (281)
T ss_dssp EEGGGGGCTHHHHHHHHTTCCEEEEEECCBG-------GGHHHHHHHHHHHHHHHTSEEEEEECEEECS--------SCE
T ss_pred EEecCCCCcHHHHHHHHCCCCEEEECCCCCC-------ccHHHHHHHHHHHHHHcCCEEEEEccCcCCC--------CcE
Confidence 9999999999999999999999999999753 2368899999999999999999999999653 578
Q ss_pred eeeeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhccCcccccchhHHH
Q 027467 158 FYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYK 211 (223)
Q Consensus 158 ~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~~~~~~~~r~~~y~ 211 (223)
|.|.|+|++|+|+++++ +.+++++++++||++.++..|+.+++++++|+|+|+
T Consensus 229 ~~G~S~ii~p~G~vl~~-~~~~e~~l~~~id~~~~~~~R~~~p~~~~rr~~lY~ 281 (281)
T 3p8k_A 229 YAGHSIVINPNGDLVGE-LNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK 281 (281)
T ss_dssp EECCCEEECTTSCEEEE-CCSSCEEEEEEEETHHHHHHHHHSCGGGTCCTTTCC
T ss_pred EeeeEEEECCCCCEEEe-cCCCCeEEEEEEcHHHHHHHHHhCcchhhcChhhcC
Confidence 99999999999999999 778899999999999999999999999999999994
No 2
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=1.6e-45 Score=302.97 Aligned_cols=195 Identities=25% Similarity=0.379 Sum_probs=168.2
Q ss_pred CHHHHHHcCcEEeeeeeeecC-CceeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCCcceEeeCCceEEEEE
Q 027467 1 MQELAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAI 79 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~~~~~~-~~~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~I 79 (223)
|+++|++++++|++|++++.+ +++||++++|+|+|+++++|+|+||++. .|..+|.+|+..+.+|+++++|||++|
T Consensus 88 l~~~a~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~---~E~~~f~~G~~~~~v~~~~~~~ig~~I 164 (283)
T 3hkx_A 88 LRGIARDRGIALVWSLPGPEGPEQRGITAELADEHGEVLASYQKVQLYGP---EEKAAFVPGEQPPPVLSWGGRQLSLLV 164 (283)
T ss_dssp HHHHHHHTTSEEEECCBCSSCTTTCCBEEEEECTTSCEEEEEECSSCCHH---HHHHHSCCCCSCCCEEEETTEEEEECC
T ss_pred HHHHHHHhCCEEEEEEEEEcCCCCEEEEEEEEcCCCcEEEEEccccCCCc---CchhhccCCCCCceEEEECCEEEEEEE
Confidence 468899999999999998876 7899999999999999999999999752 488899999864679999999999999
Q ss_pred eecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcceeee
Q 027467 80 CWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFY 159 (223)
Q Consensus 80 C~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~~~~ 159 (223)
|||++|||+++.++.+|||++++|++|+.. ...+|..+.++||+||++||+.||++|... +..|.
T Consensus 165 C~D~~fpe~~r~l~~~Ga~li~~ps~~~~~-------~~~~~~~~~~~rA~en~~~vv~~n~~G~~~--------~~~~~ 229 (283)
T 3hkx_A 165 CYDVEFPEMVRAAAARGAQLVLVPTALAGD-------ETSVPGILLPARAVENGITLAYANHCGPEG--------GLVFD 229 (283)
T ss_dssp GGGGGSHHHHHHHHHTTCSEEEEECCCBSC-------CTHHHHTHHHHHHHHHTCEEEEECBEEEET--------TEEEE
T ss_pred ecCcCCHHHHHHHHHCCCCEEEECCCCCCc-------ccHHHHHHHHHHHHHhCCEEEEEccccCCC--------CeEEe
Confidence 999999999999999999999999997531 136899999999999999999999999653 67899
Q ss_pred eeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhccCcccccchhHHHHhH
Q 027467 160 GNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVLL 214 (223)
Q Consensus 160 G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~~~~~~~~r~~~y~~~~ 214 (223)
|.|+|++|+|+++++++ +++++++++||++.++..|..+++++++|+++|+.++
T Consensus 230 G~S~ii~p~G~vl~~~~-~~e~~l~a~id~~~~~~~R~~~~~~~~rr~~ly~~l~ 283 (283)
T 3hkx_A 230 GGSVVVGPAGQPLGELG-VEPGLLVVDLPDQSQDAGSDSADYLQDRRAELHRNWL 283 (283)
T ss_dssp CCCEEECTTSCEEEECC-SSCEEEEEEEEC----------CHHHHSCHHHHHHHC
T ss_pred eEEEEECCCCCEEEecC-CCCeEEEEEECHHHHHHHHHhCChhHhcCHhhhhhcC
Confidence 99999999999999998 7899999999999999999999999999999999863
No 3
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=2e-44 Score=309.41 Aligned_cols=210 Identities=32% Similarity=0.526 Sum_probs=173.8
Q ss_pred CHHHHHHcCcEEeeeeeeec---CCceeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCCcceEeeCCceEEE
Q 027467 1 MQELAKELGVVMPVSFFEEA---NNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV 77 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~~~~~---~~~~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~ 77 (223)
|+++|++++++|++|++++. ++++||++++|+|+|+++++|+|+||++++.|.|..+|.+|...+.+|+++++|||+
T Consensus 152 l~~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g~f~E~~~f~~G~~~~~vf~~~~~riG~ 231 (405)
T 2vhh_A 152 LAELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGKLAV 231 (405)
T ss_dssp HHHHHHHTTCEEEEEEEEEETTTTTEEEEEEEEECTTSCEEEEEECSCCCC----------CCCCSCCCEEEETTEEEEE
T ss_pred HHHHHHHCCEEEEEeceecccCCCCcEEEEEEEECCCCeEEEEEecccCCCCCCcCcccceeCCCCCCeeEEECCEEEEE
Confidence 46789999999999999876 468999999999999999999999999888888999999998547899999999999
Q ss_pred EEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCcccccc----ccC-
Q 027467 78 AICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIET----EHG- 152 (223)
Q Consensus 78 ~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~----~~g- 152 (223)
+||||++|||+++.++.+|||+|++|++|... ....+|..++++||+||++||+.||++|....+. ..|
T Consensus 232 ~ICyD~~fPe~~r~la~~GAdill~psa~~~~------~~~~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~~g~ 305 (405)
T 2vhh_A 232 NICYGRHHPQNWMMFGLNGAEIVFNPSATIGR------LSEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGN 305 (405)
T ss_dssp CCGGGGGCHHHHHHHHHTTCSEEEEEECCBCT------TTHHHHHHHHHHHHHHHTSEEEEEECEECCCCC---------
T ss_pred EEeccccChHHHHHHHHcCCCEEEEcccCCCC------CCHHHHHHHHHHHHHHcCceEEEeccccccccccccccccCc
Confidence 99999999999999999999999999997431 2357899999999999999999999998652100 001
Q ss_pred ---CcceeeeeeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhccCcccccchhHHHHhHhc
Q 027467 153 ---KSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVLLTL 216 (223)
Q Consensus 153 ---~~~~~~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~~~~~~~~r~~~y~~~~~~ 216 (223)
.+...|.|.|+|++|+|+++++++.+++++++++||++.++..|..+++++++|+++|..++..
T Consensus 306 ~~~~~~~~f~G~S~IidP~G~vla~~~~~~e~il~aeiDl~~~~~~R~~~p~~~~rR~~lY~~~~~~ 372 (405)
T 2vhh_A 306 KAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFWGFRMTQRVPLYAESFKK 372 (405)
T ss_dssp --------EECCCCCBCTTSCBCCCCCSSSCEEEEEEEETTHHHHHHHHHCTTTTCCHHHHHHHHHH
T ss_pred cccccCceeccccceECCCCCEeeccCCCCCeEEEEEECHHHHHHHHHhCCchhhcCHHHHHHHHHH
Confidence 0135789999999999999999987889999999999999999999999999999999998763
No 4
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=1e-44 Score=295.06 Aligned_cols=188 Identities=39% Similarity=0.688 Sum_probs=173.9
Q ss_pred CHHHHHHcCcEEeeeeeeecCCceeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCCcceEeeCCceEEEEEe
Q 027467 1 MQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAIC 80 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC 80 (223)
|+++|++++++|++|++++.++++||++++|+|+| +++.|+|+||+ +.|..+|++|+..+.+|+++++|+|++||
T Consensus 72 l~~~a~~~~~~iv~G~~~~~~~~~yNs~~~i~~~G-~~~~y~K~hL~----~~E~~~f~~G~~~~~v~~~~~~~ig~~IC 146 (262)
T 3ivz_A 72 LMDVARDTGVYIVAGTAEKDGDVLYNSAVVVGPRG-FIGKYRKIHLF----YREKFFFEPGDLGFRVFDLGFMKVGVMIC 146 (262)
T ss_dssp HHHHHHHHCCEEEEEEEEEETTEEEEEEEEEETTE-EEEEEECSSCC----GGGGGTCBCCCSCSCEEECSSCEEEECCG
T ss_pred HHHHHHHcCcEEEEeEEEeeCCcEEEEEEEEcCCe-eEEEEeecccC----CchhceEeCCCCCceEEEECCEEEEEEEe
Confidence 46889999999999999999999999999999999 99999999995 47999999998448999999999999999
Q ss_pred ecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcceeeee
Q 027467 81 WDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYG 160 (223)
Q Consensus 81 ~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~~~~G 160 (223)
||++|||+++.++.+|+|++++|++|+. . +|..+.++||+||++||+.||++|... +..|.|
T Consensus 147 ~D~~fpe~~r~~~~~ga~li~~ps~~~~--------~--~~~~~~~~rA~en~~~vv~~n~~G~~~--------~~~~~G 208 (262)
T 3ivz_A 147 FDWFFPESARTLALKGADVIAHPANLVM--------P--YAPRAMPIRALENKVYTVTADRVGEER--------GLKFIG 208 (262)
T ss_dssp GGGGSHHHHHHHHHTTCSEEEEEECCCS--------S--CHHHHHHHHHHHHTCEEEEEECCSEET--------TEECCC
T ss_pred cCCCchHHHHHHHHCCCCEEEEcCCCCc--------h--HHHHHHHHHHHhcCcEEEEECCCCcCC--------CceEee
Confidence 9999999999999999999999999753 1 588899999999999999999999653 578999
Q ss_pred eeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhc--cCcccccchhHHH
Q 027467 161 NSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSS--WGVFRDRRPELYK 211 (223)
Q Consensus 161 ~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~--~~~~~~~r~~~y~ 211 (223)
+|+|++|+|+++++++.+++++++++||++.++..|.. .++++++|+|+|+
T Consensus 209 ~S~ii~p~G~il~~~~~~~~~~~~~~id~~~~~~~R~~~~~p~l~~rr~~lY~ 261 (262)
T 3ivz_A 209 KSLIASPKAEVLSMASETEEEVGVAEIDLSLVRNKRINDLNDIFKDRREEYYF 261 (262)
T ss_dssp CCEEECTTSCEEEECCSSCCEEEEEECCHHHHHCCEEETTEEHHHHCCGGGSC
T ss_pred eEEEECCCCCEeecCCCCCceEEEEEEcHHHHHHHhhcccCchhhhcCHhhhC
Confidence 99999999999999998888899999999999999987 8999999999995
No 5
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=1.9e-43 Score=291.61 Aligned_cols=198 Identities=28% Similarity=0.469 Sum_probs=169.4
Q ss_pred CHHHHHHcCcEEeeee-eeecC--CceeEEEEEECCCCceeeeeeccCCCC-----CCCCcccccccCCCCCcceEeeCC
Q 027467 1 MQELAKELGVVMPVSF-FEEAN--NAHYNSIAIIDADGSDLGLYRKSHIPD-----GPGYQEKFYFNPGDTGFKVFQTKF 72 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~-~~~~~--~~~yNs~~vi~~~G~i~~~y~K~~l~~-----~~~~~e~~~~~~G~~~~~~~~~~~ 72 (223)
|+++|++++++|++|. +++.+ +++||++++|+|+|+++++|+|+||+. ...|.|..+|.+|++ +.+|++++
T Consensus 83 l~~~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~-~~v~~~~~ 161 (291)
T 1f89_A 83 LSNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEK-STTIDTKY 161 (291)
T ss_dssp HHHHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCC-CEEEEETT
T ss_pred HHHHHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCC-CceEecCC
Confidence 4678999999999995 66665 789999999999999999999999953 123568889999985 88999999
Q ss_pred ceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccC
Q 027467 73 AKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHG 152 (223)
Q Consensus 73 ~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g 152 (223)
+|||++||||++|||+++.++.+|+|++++|++|+.. ....+|..++++||+||++||+.||++|...
T Consensus 162 ~~ig~~ICyD~~fpe~~r~l~~~Ga~ll~~ps~~~~~------~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~------ 229 (291)
T 1f89_A 162 GKFGVGICYDMRFPELAMLSARKGAFAMIYPSAFNTV------TGPLHWHLLARSRAVDNQVYVMLCSPARNLQ------ 229 (291)
T ss_dssp EEEEECCGGGGGCHHHHHHHHHTTEEEEEEECCCBTT------HHHHHHHHHHHHHHHHHTSEEEEECCCCCTT------
T ss_pred eeEEEEEecccCchHHHHHHHhhCCCEEEECCcCCCC------CcHHHHHHHHHHHHHHcCCEEEEecCccCCC------
Confidence 9999999999999999999999999999999986531 2357899999999999999999999999532
Q ss_pred CcceeeeeeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhccCcccccchhHHHHh
Q 027467 153 KSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVL 213 (223)
Q Consensus 153 ~~~~~~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~~~~~~~~r~~~y~~~ 213 (223)
++..|.|.|+|++|+|+++++++. ++++++++||++.++..|..+++++++|+++|+.+
T Consensus 230 -~~~~~~G~S~ii~p~G~vl~~~~~-~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~ 288 (291)
T 1f89_A 230 -SSYHAYGHSIVVDPRGKIVAEAGE-GEEIIYAELDPEVIESFRQAVPLTKQRRFDVYSDV 288 (291)
T ss_dssp -SSSCBCCCCEEECTTSCEEEECCS-SSEEEEEEECHHHHHHHHHHSCCCCCCCC------
T ss_pred -CCCeeeeEEEEECCCCCEEEecCC-CCeEEEEEECHHHHHHHHHhCChhHhCChhhhhhh
Confidence 257899999999999999999986 79999999999999999999999999999999876
No 6
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=2.7e-43 Score=292.20 Aligned_cols=207 Identities=32% Similarity=0.472 Sum_probs=178.8
Q ss_pred CHHHHHHcCcEEeeeeeeec-CC---ceeEEEEEECCCCceeeeeeccCCCCCC------CC--cccccccCCCCCcceE
Q 027467 1 MQELAKELGVVMPVSFFEEA-NN---AHYNSIAIIDADGSDLGLYRKSHIPDGP------GY--QEKFYFNPGDTGFKVF 68 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~~~~~-~~---~~yNs~~vi~~~G~i~~~y~K~~l~~~~------~~--~e~~~~~~G~~~~~~~ 68 (223)
|+++|++++++|++|++++. ++ ++||++++|+|+|+++++|+|+||+.++ .| .|..+|.+|+..+.+|
T Consensus 80 l~~~a~~~~~~iv~G~~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~~~~~~E~~~f~~G~~~~~v~ 159 (303)
T 1uf5_A 80 LFEKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVY 159 (303)
T ss_dssp HHHHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHHHHCCCCSSCSCEE
T ss_pred HHHHHHHhCeEEEEeeeEecCCCCCcceeeEEEEECCCCCEeeeEeeeecCCcccccccccccccchhhccCCCCCCceE
Confidence 46789999999999998874 44 7999999999999999999999996232 23 5888999998237899
Q ss_pred eeCCceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCC---CcHHHHHHHHHHHHhhcCceEEEEcCCCcc
Q 027467 69 QTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGL---DSRDHWRRVMQGHAGANVVPLVASNRIGKE 145 (223)
Q Consensus 69 ~~~~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~---~~~~~~~~~~~~rA~e~~~~vv~an~~G~~ 145 (223)
+++++|+|++||||++|||+++.++.+|+|++++|++|+..+..... ....+|..+.++||+||++||+.||++|..
T Consensus 160 ~~~~~~ig~~ICyD~~fpe~~r~l~~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~ 239 (303)
T 1uf5_A 160 DVDAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKAGME 239 (303)
T ss_dssp EETTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEEBCEEE
T ss_pred ecCCceEEEEEecCccCHHHHHHHHHCCCCEEEEecCCccccccccCCccccHHHHHHHHHhhhhcCCcEEEEECccccc
Confidence 99999999999999999999999999999999888776543322100 035789999999999999999999999965
Q ss_pred ccccccCCcceeeeeeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhc-cCcccccchhHHHHhHh
Q 027467 146 IIETEHGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSS-WGVFRDRRPELYKVLLT 215 (223)
Q Consensus 146 ~~~~~~g~~~~~~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~-~~~~~~~r~~~y~~~~~ 215 (223)
. +..|.|+|+|++|+|+++++++.+++++++++||++.++..|.. +++++++|+++|+.++.
T Consensus 240 ~--------~~~~~G~S~ii~p~G~vl~~~~~~~~~~l~~~id~~~~~~~R~~~~~~~~~rr~~~y~~~~~ 302 (303)
T 1uf5_A 240 E--------NCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQHRQPQHYGLIAE 302 (303)
T ss_dssp T--------TEEECCCCEEECTTSCEEEECCSSSSEEEEEEEEGGGGHHHHTTTTCHHHHCCGGGCGGGGC
T ss_pred C--------CccccceeEEECCCCCEeccCCCCCCcEEEEEEcHHHHHHHHhhcccchhccCHHHHHHhhc
Confidence 3 46899999999999999999988888999999999999999999 99999999999998764
No 7
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=1.7e-43 Score=289.88 Aligned_cols=198 Identities=30% Similarity=0.523 Sum_probs=175.5
Q ss_pred CHHHHHHcCcEEeee-eeeecCCceeEEEEEECCCCceeeeeeccCCC----CC-CCCcccccccCCCCCcceEeeCCce
Q 027467 1 MQELAKELGVVMPVS-FFEEANNAHYNSIAIIDADGSDLGLYRKSHIP----DG-PGYQEKFYFNPGDTGFKVFQTKFAK 74 (223)
Q Consensus 1 l~~~A~~~~i~i~~G-~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~l~----~~-~~~~e~~~~~~G~~~~~~~~~~~~~ 74 (223)
|+++|++++++|++| .+++.++++||++++|+|+|+++++|+|+||+ |. +.|.|..+|.+|++ +.+|+++++|
T Consensus 69 l~~~a~~~~~~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~-~~v~~~~~~~ 147 (276)
T 2w1v_A 69 LSEVAKESSIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDS-FSTFDTPYCK 147 (276)
T ss_dssp HHHHHHHHTSEEECCCEEEEETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCC-CCEEECSSCE
T ss_pred HHHHHHHcCeEEEecceeecCCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCC-ceeEEeCCce
Confidence 467899999999999 45666789999999999999999999999994 32 23468899999985 8899999999
Q ss_pred EEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCc
Q 027467 75 IGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKS 154 (223)
Q Consensus 75 ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~ 154 (223)
+|++||||++|||+++.++.+|+|++++|++|+.. ....+|..+.++||+||++||+.||++|... +
T Consensus 148 ig~~ICyD~~fpe~~r~~~~~ga~ll~~ps~~~~~------~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~-------~ 214 (276)
T 2w1v_A 148 VGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLT------TGPAHWELLQRARAVDNQVYVATASPARDDK-------A 214 (276)
T ss_dssp EEECCGGGGGCHHHHHHHHHTTEEEEEEECCCCTT------HHHHHHHHHHHHHHHHHTCEEEEECCCCCTT-------S
T ss_pred EEEEEEeccccHHHHHHHHHcCCCEEEECCcCCCc------CCHHHHHHHHHHHHHHcCcEEEEecccccCC-------C
Confidence 99999999999999999999999999999987531 2357899999999999999999999998643 2
Q ss_pred ceeeeeeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhccCcccccchhHHHHh
Q 027467 155 QITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVL 213 (223)
Q Consensus 155 ~~~~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~~~~~~~~r~~~y~~~ 213 (223)
...|.|.|+|++|+|+++++++. ++++++++||++.++..|..++++.++|+++|+..
T Consensus 215 ~~~~~G~S~ii~p~G~v~~~~~~-~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~ 272 (276)
T 2w1v_A 215 SYVAWGHSTVVDPWGQVLTKAGT-EETILYSDIDLKKLAEIRQQIPILKQKRADLYTVE 272 (276)
T ss_dssp SSCCCCCCEEECTTSCEEEECCS-SSEEEEEEEEHHHHHHHHHHSCGGGSCCTTTEEEE
T ss_pred CceeeeEeEEECCCCCEeEEcCC-CCeEEEEEEcHHHHHHHHHhCChhHhCCHHHhhcc
Confidence 46789999999999999999987 89999999999999999999999999999999743
No 8
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=7.3e-44 Score=290.55 Aligned_cols=192 Identities=19% Similarity=0.279 Sum_probs=173.7
Q ss_pred CHHHHHHcCcEEeeeeeeecCCceeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCCcceEeeCCceEEEEEe
Q 027467 1 MQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAIC 80 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC 80 (223)
|+++|++++++|++|++++.++++||++++|+|+|+++ +|+|+||+++ +.|..+|.+|++ +.+|+++++|+|++||
T Consensus 68 l~~~a~~~~~~iv~G~~~~~~~~~yNs~~~i~~~G~i~-~y~K~hL~~~--~~E~~~f~~G~~-~~v~~~~~~~ig~~IC 143 (266)
T 2e11_A 68 IRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQ-YYDKRHLFRF--GNEHLRYAAGRE-RLCVEWKGWRINPQVC 143 (266)
T ss_dssp HHHHHHHHTSEEEEEEEEEETTEEEEEEEEECTTSCEE-EEECSSCCGG--GTTTTTSBCCCS-CCCEEETTEEEEEEEG
T ss_pred HHHHHHHhCCEEEEeeeEccCCcEEEEEEEECCCCCEE-EEeeeccCCC--cChhhhccCCCC-ceEEEECCEEEEEEEE
Confidence 46789999999999999888889999999999999999 9999999875 358899999985 8999999999999999
Q ss_pred ecCCCchHHHHHH---Hc---CCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCc
Q 027467 81 WDQWFPEAARAMV---LQ---GAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKS 154 (223)
Q Consensus 81 ~D~~~pe~~~~~~---~~---gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~ 154 (223)
||++|||+.+.++ ++ |+|++++|++|+. ...++|..+.++||+||++||+.||++|... +
T Consensus 144 yD~~fpe~~r~~~~~~~~~~~ga~~i~~~s~w~~-------~~~~~~~~~~~~rA~en~~~vv~an~~G~~~-------~ 209 (266)
T 2e11_A 144 YDLRFPVFCRNRFDVERPGQLDFDLQLFVANWPS-------ARAYAWKTLLRARAIENLCFVAAVNRVGVDG-------N 209 (266)
T ss_dssp GGGGCTTTTCCCBSSSSTTSBSCSEEEEEECCCG-------GGHHHHHHHHHHHHHHTTSEEEEEECEEECT-------T
T ss_pred eccCCHHHHHHHHhhhhccCCCCcEEEEeCCCCC-------CchHHHHHHHHHHHHhcCcEEEEEcCCcCCC-------C
Confidence 9999999998764 43 9999999999753 2456899999999999999999999999643 1
Q ss_pred ceeeeeeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhccCcccccchhHHH
Q 027467 155 QITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYK 211 (223)
Q Consensus 155 ~~~~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~~~~~~~~r~~~y~ 211 (223)
+..|.|+|+|++|+|+++++++ +++++++++||++.++..|..+++++++|+++|+
T Consensus 210 ~~~~~G~S~ii~p~G~v~~~~~-~~e~~l~~~id~~~~~~~R~~~~~~~~rr~~~y~ 265 (266)
T 2e11_A 210 QLHYAGDSAVIDFLGQPQVEIR-EQEQVVTTTISAAALAEHRARFPAMLDGDSFVLG 265 (266)
T ss_dssp SCEEEEEEEEECTTSCEEEEEE-SSCEEEEEEECHHHHHHHHHHSCGGGGCCCEEEC
T ss_pred CceEeeeEEEECCCCceeeecC-CCCeEEEEEEcHHHHHHHHHhCChhhhcChhhhc
Confidence 3689999999999999999998 8899999999999999999999999999999885
No 9
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=100.00 E-value=5.4e-41 Score=291.61 Aligned_cols=201 Identities=26% Similarity=0.438 Sum_probs=176.3
Q ss_pred CHHHHHHcCcEEeeeeee---e-cCCceeEEEEEECCCCceeeeeeccCCCC-----CCCCcccccccCCCCCcce-Eee
Q 027467 1 MQELAKELGVVMPVSFFE---E-ANNAHYNSIAIIDADGSDLGLYRKSHIPD-----GPGYQEKFYFNPGDTGFKV-FQT 70 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~~~---~-~~~~~yNs~~vi~~~G~i~~~y~K~~l~~-----~~~~~e~~~~~~G~~~~~~-~~~ 70 (223)
|+++|++++++|++|++. + .++++||++++|+|+|+++++|+|+||++ ...|.|..+|.+|++ ..+ |++
T Consensus 81 l~~~A~~~~i~iv~G~~~~~e~~~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~-~~~~~~~ 159 (440)
T 1ems_A 81 YRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTE-MIPPVDT 159 (440)
T ss_dssp HHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCS-CCCCEEE
T ss_pred HHHHHHHcCeEEEeccccccccCCCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCC-CceeEEC
Confidence 467899999999999654 3 34689999999999999999999999963 223568889999986 666 999
Q ss_pred CCceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccccccc
Q 027467 71 KFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETE 150 (223)
Q Consensus 71 ~~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~ 150 (223)
+++|+|++||||++|||+++.++.+|+|++++|++|+.. ....+|..++++||+||++||+.||++|...
T Consensus 160 ~~~~iG~~ICyD~~fpe~~r~l~~~Ga~il~~psa~~~~------~~~~~~~~~~~arA~En~~~vv~an~~G~~~---- 229 (440)
T 1ems_A 160 PIGRLGLSICYDVRFPELSLWNRKRGAQLLSFPSAFTLN------TGLAHWETLLRARAIENQCYVVAAAQTGAHN---- 229 (440)
T ss_dssp TTEEECCCCGGGGGCHHHHHHHHHTTCSEEECCBCCCHH------HHHHHHHHHHHHHHHHHTCEEEECBBEEEEE----
T ss_pred CCeeEEEEEeccccChHHHHHHHHcCCcEEEECCcCCCC------CcHHHHHHHHHHHHHhcCcEEEEecccccCC----
Confidence 999999999999999999999999999999999987431 1346899999999999999999999999643
Q ss_pred cCCcceeeeeeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhccCcccccchhHHHHhHhc
Q 027467 151 HGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVLLTL 216 (223)
Q Consensus 151 ~g~~~~~~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~~~~~~~~r~~~y~~~~~~ 216 (223)
+...|.|.|+|++|+|+++++++. ++++++++||++.++..|..++.+.++|+++|..++.+
T Consensus 230 ---~~~~~~G~S~ii~P~G~vla~~~~-~e~il~a~idl~~~~~~R~~~~~~~~rr~~~y~~~~~~ 291 (440)
T 1ems_A 230 ---PKRQSYGHSMVVDPWGAVVAQCSE-RVDMCFAEIDLSYVDTLREMQPVFSHRRSDLYTLHINE 291 (440)
T ss_dssp ---TTEEEECCCEEECTTSCEEEECCS-SSCEEEEEEEHHHHHHHHHHSCGGGSCCTTTCCCCCCC
T ss_pred ---CCceeeeeeEEECCCCCeeccCCC-CCcEEEEEeCHHHHHHHHHhCChhhhcChhhhhccccc
Confidence 137899999999999999999974 78999999999999999999999999999999887754
No 10
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=9.4e-39 Score=268.16 Aligned_cols=182 Identities=24% Similarity=0.340 Sum_probs=160.9
Q ss_pred CHHHHHHcCcEEeeeeeeecC-Cc--eeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCCcceEee-CCceEE
Q 027467 1 MQELAKELGVVMPVSFFEEAN-NA--HYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKIG 76 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~~~~~~-~~--~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~~~~~~~-~~~~ig 76 (223)
|+++|++++++|++|++++.+ ++ +||++++|+|+|+++++|+|+||+. |..+|.+|....++|++ .+.|+|
T Consensus 88 l~~~a~~~~i~iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hlf~-----e~~~f~~G~~~~~v~~~~~g~~iG 162 (334)
T 2dyu_A 88 YAKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGEIILKYRKLFPWN-----PIEPWYPGDLGMPVCEGPGGSKLA 162 (334)
T ss_dssp HHHHHHHHTCEEEEEEEECCSSTTSCCEEEEEEECTTSCEEEEEECSSCCT-----TTCCCCCCCSCCCCEECGGGCEEE
T ss_pred HHHHHHHhCeEEEEeeEEECCCCCceeEEEEEEECCCCCEEEEEeeccCCC-----CcccCcCCCCCceeEECCCCCEEE
Confidence 467899999999999998753 44 9999999999999999999999753 45578999864458998 466999
Q ss_pred EEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcce
Q 027467 77 VAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQI 156 (223)
Q Consensus 77 ~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~ 156 (223)
++||||++|||++|.++.+|||+|++|++|+. ....+|..+.++||+||++||+.||++|... ..
T Consensus 163 ~~ICyD~~fpe~~r~~~~~Gadlil~psaw~~-------~~~~~~~~~~~arA~En~~~vv~an~~G~~~--------~~ 227 (334)
T 2dyu_A 163 VCICHDGMIPELAREAAYKGCNVYIRISGYST-------QVNDQWILTNRSNAWHNLMYTVSVNLAGYDN--------VF 227 (334)
T ss_dssp EEEGGGGGCHHHHHHHHHTTCSEEEEEESSCT-------TSHHHHHHHHHHHHHHHTCEEEEEECSBSSS--------SC
T ss_pred EEEECCCCchHHHHHHHHcCCCEEEEeCCCCC-------CcHHHHHHHHHHHHHhCCCEEEEECCCcCCC--------Ce
Confidence 99999999999999999999999999999753 2357999999999999999999999999653 57
Q ss_pred eeeeeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhccCcc
Q 027467 157 TFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVF 202 (223)
Q Consensus 157 ~~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~~~~~ 202 (223)
.|.|.|+|++|+|+++++++.+++++++++||++.++..|+.++..
T Consensus 228 ~~~G~S~Iidp~G~vla~~~~~~e~il~a~idl~~~~~~R~~~~~~ 273 (334)
T 2dyu_A 228 YYFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLE 273 (334)
T ss_dssp CCCCEEEEECTTSCEEEECCCCTTCEEEEEECHHHHHHHHHHCSTT
T ss_pred eeeeEEEEECCCCCEeeecCCCCCeEEEEEEcHHHHHHHHhhCchh
Confidence 8999999999999999999878899999999999999999988754
No 11
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=100.00 E-value=1.7e-38 Score=267.26 Aligned_cols=180 Identities=23% Similarity=0.268 Sum_probs=160.2
Q ss_pred CHHHHHHcCcEEeeeee-eecC----CceeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCCcceEee-CCce
Q 027467 1 MQELAKELGVVMPVSFF-EEAN----NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAK 74 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~~-~~~~----~~~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~~~~~~~-~~~~ 74 (223)
|+++|++++++|++|++ ++.+ +++||++++|+|+|+++++|+|+||+. |..+|.+|+. ..+|++ .+.|
T Consensus 87 l~~~a~~~~i~iv~G~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hlf~-----e~~~f~pG~~-~~v~~~~~G~r 160 (341)
T 2uxy_A 87 FSRACRKANVWGVFSLTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPWC-----PIEGWYPGGQ-TYVSEGPKGMK 160 (341)
T ss_dssp HHHHHHHHTCEEEEEEEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSCCT-----TTCCCBCCCC-CCCEECGGGCE
T ss_pred HHHHHHHhCcEEEEEeeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeeccCC-----CccceeCCCC-ceEEECCCCCE
Confidence 46789999999999998 7653 349999999999999999999999853 5567899986 679999 4669
Q ss_pred EEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCc
Q 027467 75 IGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKS 154 (223)
Q Consensus 75 ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~ 154 (223)
||++||||++|||++|.++.+|||+|++|++|+. ....+|..++++||+||++||+.||++|...
T Consensus 161 iG~~ICyD~~fpe~~r~l~~~Gadlll~psa~~~-------~~~~~~~~l~~arA~En~~~vv~an~~G~~~-------- 225 (341)
T 2uxy_A 161 ISLIIXDDGNYPEIWRDCAMKGAELIVRCQGYMY-------PAKDQQVMMAKAMAWANNCYVAVANAAGFDG-------- 225 (341)
T ss_dssp EEEEEGGGGGSHHHHHHHHHTTCSEEEEEECCBT-------TCHHHHHHHHHHHHHHHTCEEEEEECEEECS--------
T ss_pred EEEEEccCCcCcHHHHHHHHcCCCEEEEcCCCCC-------CcHHHHHHHHHHHHHhCCcEEEEECCCCCCC--------
Confidence 9999999999999999999999999999999753 2357899999999999999999999999543
Q ss_pred ceeeeeeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhccCc
Q 027467 155 QITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGV 201 (223)
Q Consensus 155 ~~~~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~~~~ 201 (223)
...|.|.|+|++|+|+++++++.+++++++++||+..++..|..++.
T Consensus 226 ~~~~~G~S~Iidp~G~vla~~~~~~e~il~a~id~~~~~~~R~~~~~ 272 (341)
T 2uxy_A 226 VYSYFGHSAIIGFDGRTLGECGEEEMGIQYAQLSLSQIRDARANDQS 272 (341)
T ss_dssp SCEEECCCEEECTTSCEEEECCSCTTCEEEEEEEHHHHHHHHHHCCT
T ss_pred CceeeeEEEEECCCCCEEEECCCCCCEEEEEEEcHHHHHHHHhhcch
Confidence 57899999999999999999998889999999999999999988875
No 12
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=3.1e-36 Score=269.79 Aligned_cols=177 Identities=27% Similarity=0.394 Sum_probs=159.7
Q ss_pred CHHHHHHc--C----cEEeeeeeeecC----------CceeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCC
Q 027467 1 MQELAKEL--G----VVMPVSFFEEAN----------NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTG 64 (223)
Q Consensus 1 l~~~A~~~--~----i~i~~G~~~~~~----------~~~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~ 64 (223)
|+++|+++ + ++|++|++++.+ +++||++++|+ +|++++.|+|+||++++.|.|.++|.+|+.
T Consensus 70 l~~la~~~~~~~~~~i~ivvG~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L~~~~~f~E~r~f~~G~~- 147 (590)
T 3n05_A 70 LRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYGVFDEFRYFVPGDT- 147 (590)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEEEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCCCSSSSCCHHHHCCCCCE-
T ss_pred HHHHHHhhhhccCCceEEEEeeEEEEcCcccccccccCCeeEEEEEEe-CCEEEEEEeCccCCCCCccCccccccCCCc-
Confidence 46788888 6 999999998753 36999999998 999999999999999999999999999995
Q ss_pred cceEeeCCceEEEEEeecCCC-chHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCC
Q 027467 65 FKVFQTKFAKIGVAICWDQWF-PEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIG 143 (223)
Q Consensus 65 ~~~~~~~~~~ig~~IC~D~~~-pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G 143 (223)
+.+|+++++|||++||||+|| |+.++.++.+|||++++|++|+... ....+|..+.++||+||+++++.||++|
T Consensus 148 ~~v~~~~g~~iG~~IC~D~~f~pe~~~~la~~Ga~ii~~psa~p~~~-----gk~~~~~~l~~~rA~e~~~~vv~an~~G 222 (590)
T 3n05_A 148 MPIVRLHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYER-----DKDDTRLELVRKRAQEAGCTTAYLAMIG 222 (590)
T ss_dssp EEEEEETTEEEEEEEGGGGGSTTSHHHHHHHTTCSEEEEEECCBCCC-----CSSCHHHHHHHHHHHHHTSEEEEEECEE
T ss_pred ceEEEECCEEEEEEeehhhccCChHHHHHHHcCCCEEEEecCCcccc-----CcHHHHHHHHHHHHHHhCCEEEEEeccc
Confidence 899999999999999999999 9999999999999999999975421 1246889999999999999999999998
Q ss_pred ccccccccCCcceeeeeeeEEECCCCCeeeecCCCCceEEEEEechhhH
Q 027467 144 KEIIETEHGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKL 192 (223)
Q Consensus 144 ~~~~~~~~g~~~~~~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~ 192 (223)
.. ++..|+|+|+|++|+|+++++++.+++++++++||++.+
T Consensus 223 ~~--------~~~~f~G~S~iidp~G~vla~~~~~~e~~~~~didl~~~ 263 (590)
T 3n05_A 223 GQ--------DELVFDGDSIVVDRDGEVVARAPQFSEGCVVLDLDLPAA 263 (590)
T ss_dssp EE--------TTEEEEBCCEEECTTSCEEEECCBTSCEEEEEEEEECCC
T ss_pred CC--------CCeEEeCcEEEECCCCcEEEEcCCCCCcEEEEEEccccc
Confidence 53 378999999999999999999998899999999998876
No 13
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=6.7e-36 Score=269.03 Aligned_cols=200 Identities=17% Similarity=0.260 Sum_probs=152.3
Q ss_pred CHHHHHHc-CcEEeeeeeeecCCceeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCC---------------
Q 027467 1 MQELAKEL-GVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTG--------------- 64 (223)
Q Consensus 1 l~~~A~~~-~i~i~~G~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~--------------- 64 (223)
|+++|+++ +++|++|++++.++++||++++| ++|++++.|+|+||+++++|.|.++|.+|...
T Consensus 71 l~~la~~~~~i~ivvG~p~~~~~~lyNsa~vi-~~G~il~~y~K~hL~~~~~f~E~r~f~pG~~~~~~~~~~~g~~~p~g 149 (634)
T 3ilv_A 71 CFEIAASCTDITVSLGLPMRIAGITYNCVCLV-ENGIVKGFSAKQFLANEGVHYETRWFTAWPRNHTTTFLYNDVKYPFG 149 (634)
T ss_dssp HHHHHTTCTTSEEEEEEEEEETTEEEEEEEEE-ETTEEEEEEECSSCCCSTTCCGGGTCCCCCTTCEEEEEETTEEEEEE
T ss_pred HHHHHHhCCCCEEEEeeeEeeCCCccEEEEEE-ECCeEEEEEcCEeCCCCCCcChhhhcCCCCccccceecccCcccccC
Confidence 46788886 99999999999899999999999 79999999999999999999999999999852
Q ss_pred cceEeeCCceEEEEEeecCCCch-HHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCC
Q 027467 65 FKVFQTKFAKIGVAICWDQWFPE-AARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIG 143 (223)
Q Consensus 65 ~~~~~~~~~~ig~~IC~D~~~pe-~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G 143 (223)
..+|+++++|||++||||+|||+ +++.++.+|||+|++|++|+.. .....+|..+.++||+||+++++.+|++|
T Consensus 150 ~~vf~~~g~~iG~~IC~D~~fPe~~~r~la~~GAdii~~psas~~~-----~gk~~~~~~l~~~rA~e~~~~vv~aN~~G 224 (634)
T 3ilv_A 150 DVLYNVKDARIGFEICEDAWRTDRVGIRHYEKGATLVLNPSASHFA-----FGKSAIRYDLVIGGSERFDCTYVYANLLG 224 (634)
T ss_dssp SCCEEETTEEEEECCTTC----------CGGGTCSEEEEEECCBCC-----TTHHHHHHHHHHHHHHHTTSEEEEEECEE
T ss_pred CeEEEECCEEEEEEEeccccCChHHHHHHHHCCCcEEEEecCCccc-----cCcHHHHHHHHHHHHHHhCCEEEEEcCcc
Confidence 16899999999999999999998 8999999999999999996532 12347899999999999999999999998
Q ss_pred ccccccccCCcceeeeeeeEEECCCCCeeeecCCC---CceEEEEEechhhHHhhhhccCcccc-cchhHHHHhH
Q 027467 144 KEIIETEHGKSQITFYGNSFIAGPTGEIVAAADDK---EEAVLVAQFDLDKLKSKRSSWGVFRD-RRPELYKVLL 214 (223)
Q Consensus 144 ~~~~~~~~g~~~~~~~G~S~iv~p~G~il~~~~~~---~e~~l~~~i~l~~~~~~r~~~~~~~~-~r~~~y~~~~ 214 (223)
... ++..|+|+|+|+ |+|+++++++.+ ++++++++||++.++..|..++.-.. ...++|..++
T Consensus 225 ~~~-------~~~~f~G~S~I~-p~G~vla~~~~f~~~~~~vi~a~iDl~~~~~~R~~~~~~~~~~~~~~~~~~~ 291 (634)
T 3ilv_A 225 NEA-------GRMIYDGEVLIA-HKGKLIQRNDRLSFKNVNLIYADIATDSAETPETVLTQDDLEKEFEFWEATS 291 (634)
T ss_dssp ESS-------SSCEEECCEEEE-ETTEEEEECCSSCSSSEEEEEEEEEC--------------CCHHHHHHHHHH
T ss_pred CCC-------CceEEcceEEEE-cCCeEEEECCCCCCCCceEEEEEEEhHHhHHHHhcCCCCCCCcHHHHHHHHH
Confidence 652 368999999988 999999999865 35899999999999888877643221 2346666543
No 14
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=8e-35 Score=258.68 Aligned_cols=190 Identities=26% Similarity=0.409 Sum_probs=160.9
Q ss_pred cCcEEeeeeeeecC----------------CceeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCCcceEeeC
Q 027467 8 LGVVMPVSFFEEAN----------------NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTK 71 (223)
Q Consensus 8 ~~i~i~~G~~~~~~----------------~~~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~ 71 (223)
.++.|++|++++.. +++||++++++ +|++++.|+|+||++++.|.|.++|.+|.. +.+|+++
T Consensus 83 ~~i~ivvG~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hLp~~~~f~E~r~f~~G~~-~~v~~~~ 160 (565)
T 4f4h_A 83 AGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDLPNTEVFDEKRYFATDAA-PYVFELN 160 (565)
T ss_dssp TTCEEEEEEEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSCCCSTTCCGGGTCCCCCC-CCEEEET
T ss_pred CCcEEEEeeeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeecCCCcccceeccccCCCc-ceeEEec
Confidence 47999999987643 25899999996 799999999999999999999999999996 8999999
Q ss_pred CceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCcccccccc
Q 027467 72 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEH 151 (223)
Q Consensus 72 ~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~ 151 (223)
++|||+.||||+||||..+.++.+||+++++|++++. .. ...++|..+.++||++|+++++.+|++|.
T Consensus 161 g~~iGv~IC~Dlwfpe~~r~la~~GA~ii~~psAs~~---~~--gk~~~r~~ll~arA~e~~~~vvy~N~vG~------- 228 (565)
T 4f4h_A 161 GVKFGVVICEDVWHASAAQLAKAAGAQVLIVPNGSPY---HM--NKDAVRIDILRARIRETGLPMVYVNLVGG------- 228 (565)
T ss_dssp TEEEEECCGGGGGSSHHHHHHHHTTCSEEEEEECCBC---CT--THHHHHHHHHHHHHHHHCCCEEEEECEEE-------
T ss_pred CcEEEEEEeehhcccchhHHHHhCCCeeeeccccccc---cc--CcHHHHHHHHHHHHHHhCCcEEEeeeecC-------
Confidence 9999999999999999999999999999999999643 21 23578999999999999999999999994
Q ss_pred CCcceeeeeeeEEECCCCCeeeecCCCCceEEEEEechhhHHhhhhccCcccccchhHHHHhH
Q 027467 152 GKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVLL 214 (223)
Q Consensus 152 g~~~~~~~G~S~iv~p~G~il~~~~~~~e~~l~~~i~l~~~~~~r~~~~~~~~~r~~~y~~~~ 214 (223)
+++..|+|+|+|++|.|+++++++.++|+++++++|....... ..........++|..++
T Consensus 229 -~~~~~f~G~S~iidp~G~vla~~~~f~e~~~~~d~d~~~~~~~--~~~~~~~~~~~~~~a~~ 288 (565)
T 4f4h_A 229 -QDELVFDGGSFVLDGAGELVAKMPQFEEGNAIVEFDGARALPA--AIAPALSVEAQVYRALV 288 (565)
T ss_dssp -ETTEEEEBCCEEECTTSCEEEECCBSCCEEEEEEEETTEECCC--CBCCCCCHHHHHHHHHH
T ss_pred -CCCeEEECCcceecCCCcEEEEccccccceEEEEecccccccc--ccccCcchHHHHHHHHH
Confidence 3478999999999999999999999999999999986543211 11112233457777664
No 15
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=1.6e-34 Score=261.50 Aligned_cols=193 Identities=22% Similarity=0.289 Sum_probs=162.2
Q ss_pred CHHHHHHcCcEEeeeeeeecCCceeEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCCc---------------
Q 027467 1 MQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF--------------- 65 (223)
Q Consensus 1 l~~~A~~~~i~i~~G~~~~~~~~~yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~~--------------- 65 (223)
|+++|++++++|++|++++.++++||++++|+ +|++++.|+|+||+++++|.|.++|.+|....
T Consensus 81 l~~~a~~~~i~ivvG~p~~~~~~lyNsa~vi~-~G~il~~y~K~hL~~~~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~~ 159 (680)
T 3sdb_A 81 LVTESADLLPVLVVGAPLRHRHRIYNTAVVIH-RGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTD 159 (680)
T ss_dssp HHHHHTTCSSEEEEEEEEEETTEEEEEEEEEE-TTEEEEEEECSCCCEETTEEGGGTEECCTTCCSEEEETTEEEEBSSC
T ss_pred HHHHhhcCCcEEEEeceEEeCCCceEEEEEEe-CCCEEEEEeeecCCCCCccChhhhcCCCCCCCceeeecCcccccCCc
Confidence 35678899999999999999999999999998 99999999999999999999999999998521
Q ss_pred ceE---eeCCceEEEEEeecCCCchHH-HHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcC-ceEEEEc
Q 027467 66 KVF---QTKFAKIGVAICWDQWFPEAA-RAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANV-VPLVASN 140 (223)
Q Consensus 66 ~~~---~~~~~~ig~~IC~D~~~pe~~-~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~-~~vv~an 140 (223)
.+| +++++|||+.||||+|||+.. +.++.+|||+|++|++|+.. ....++|..+.++++.+++ ++|+.+|
T Consensus 160 ~vf~~~~~~g~riGv~IC~Dl~fPe~~~r~la~~GAdiil~pSasp~~-----~gk~~~r~~l~~~~aar~~~~yV~a~~ 234 (680)
T 3sdb_A 160 LLFAASDLPGFVLHVEIAEDMFVPMPPSAEAALAGATVLANLSGSPIT-----IGRAEDRRLLARSASARCLAAYVYAAA 234 (680)
T ss_dssp EEEEETTCTTCEEEEEEGGGGGSSSCHHHHHHHHTCCEEEEECCCCCC-----TTHHHHHHHHHHHHHHHTTSEEEEECC
T ss_pred eeEeeeccCCeEEEEEEeccccccccHHHHHHhcCCeEEEEecCCccc-----cCcHHHHHHHHHHHHHHhCCcEEEEEC
Confidence 146 689999999999999999995 89999999999999997532 1123566777787777765 4555555
Q ss_pred CCCccccccccCCcceeeeeeeEEECCCCCeeeecCCC--CceEEEEEechhhHHhhhhccCcccccch
Q 027467 141 RIGKEIIETEHGKSQITFYGNSFIAGPTGEIVAAADDK--EEAVLVAQFDLDKLKSKRSSWGVFRDRRP 207 (223)
Q Consensus 141 ~~G~~~~~~~~g~~~~~~~G~S~iv~p~G~il~~~~~~--~e~~l~~~i~l~~~~~~r~~~~~~~~~r~ 207 (223)
..|... ++..|+|+|+|+ |+|+++++++.+ ++++++++||++.++..|..++++.++|.
T Consensus 235 ~~G~~~-------~~l~f~G~S~I~-p~G~vla~~~~f~~~e~ll~adiDl~~l~~~R~~~~~~~~~~~ 295 (680)
T 3sdb_A 235 GEGEST-------TDLAWDGQTMIW-ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRR 295 (680)
T ss_dssp CTTSCC-------SSCCCCCCEEEE-ETTEEEEECCSSCSSCEEEEEEEEHHHHHHHHHHCHHHHHHHH
T ss_pred CcccCC-------CCeEEeccEEEE-cCCEEEEECCCCCCCCcEEEEEEcHHHHHHHHHhCCchhhhhh
Confidence 566532 367899999999 999999999987 89999999999999999999888876653
No 16
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=77.53 E-value=7.3 Score=30.75 Aligned_cols=75 Identities=12% Similarity=0.158 Sum_probs=42.7
Q ss_pred HHHHHcCCcEEEeeccCCCCCCCCCC-----C-cHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcceeeeeeeE
Q 027467 90 RAMVLQGAEILFYPTAIGSEPQDDGL-----D-SRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYGNSF 163 (223)
Q Consensus 90 ~~~~~~gadlii~ps~~~~~~~~~~~-----~-~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~~~~G~S~ 163 (223)
+.++.+|+|||+.|=.+.. .+.... . ....+....+..|.+++++++.-...-.. +..++-.+.
T Consensus 47 ~~A~~~gadlvvfPE~~l~-gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~G~~~~~~---------~~~~yNs~~ 116 (281)
T 3p8k_A 47 EKNMNAEVDVVVLPEMWNN-GYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIR---------NNQIFNTAF 116 (281)
T ss_dssp HHHCCTTCCEEECCSSTTT-TTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEEEEEEEEE---------TTEEEEEEE
T ss_pred HHHHhCCCcEEEcCCCccC-CCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEEeeeEEcc---------CCcEEEEEE
Confidence 3344579999999987543 121110 0 01334445566788889887643211000 113455788
Q ss_pred EECCCCCeeee
Q 027467 164 IAGPTGEIVAA 174 (223)
Q Consensus 164 iv~p~G~il~~ 174 (223)
+++|+|+++..
T Consensus 117 ~i~~~G~i~~~ 127 (281)
T 3p8k_A 117 SVNKSGQLINE 127 (281)
T ss_dssp EECTTSCEEEE
T ss_pred EEcCCCeEEEE
Confidence 89999998754
No 17
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=74.56 E-value=9.9 Score=29.52 Aligned_cols=75 Identities=17% Similarity=0.274 Sum_probs=42.8
Q ss_pred HHHHHHHcCCcEEEeeccCCCCCCCCCCC----------cHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCccee
Q 027467 88 AARAMVLQGAEILFYPTAIGSEPQDDGLD----------SRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQIT 157 (223)
Q Consensus 88 ~~~~~~~~gadlii~ps~~~~~~~~~~~~----------~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~~ 157 (223)
+.+.++.+|+|+|+.|=.+... +..... ....+....+..|.+++++++.- ..-.. +..
T Consensus 26 ~i~~A~~~gadlvvfPE~~~~g-y~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv~G-~~~~~---------~~~ 94 (262)
T 3ivz_A 26 LIKEASKQGAQLVVLPELFDTG-YNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIVAG-TAEKD---------GDV 94 (262)
T ss_dssp HHHHHHHTTCSEEECCTTTTTC-SCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEEEE-EEEEE---------TTE
T ss_pred HHHHHHHCCCCEEEeCCCcccC-CCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEEEe-EEEee---------CCc
Confidence 3444567899999999876432 111100 01133444566778889887644 11111 123
Q ss_pred eeeeeEEECCCCCeeee
Q 027467 158 FYGNSFIAGPTGEIVAA 174 (223)
Q Consensus 158 ~~G~S~iv~p~G~il~~ 174 (223)
++-.+.+++|+| ++..
T Consensus 95 ~yNs~~~i~~~G-~~~~ 110 (262)
T 3ivz_A 95 LYNSAVVVGPRG-FIGK 110 (262)
T ss_dssp EEEEEEEEETTE-EEEE
T ss_pred EEEEEEEEcCCe-eEEE
Confidence 455778888999 7654
No 18
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=74.54 E-value=8.2 Score=30.49 Aligned_cols=77 Identities=29% Similarity=0.266 Sum_probs=43.7
Q ss_pred HHHHHHHcCCcEEEeeccCCCCCCCCC-----CC--cHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcceeeee
Q 027467 88 AARAMVLQGAEILFYPTAIGSEPQDDG-----LD--SRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYG 160 (223)
Q Consensus 88 ~~~~~~~~gadlii~ps~~~~~~~~~~-----~~--~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~~~~G 160 (223)
+.+.++.+|+|+|+.|=.+... +... +. ....+....+..|.+++++++.-. .-.. + +..++-
T Consensus 45 ~i~~A~~~gadlvvfPE~~l~g-y~~~d~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~-~~~~------~--~~~~yN 114 (283)
T 3hkx_A 45 AAARASEQGAQLLLTPELFGFG-YVPSQICAQVSAEQVDAARSRLRGIARDRGIALVWSL-PGPE------G--PEQRGI 114 (283)
T ss_dssp HHHHHHHTTCSEEECCTTGGGC-SCHHHHHHHCCHHHHHHHHHHHHHHHHHTTSEEEECC-BCSS------C--TTTCCB
T ss_pred HHHHHHHCCCCEEEcCCCcccC-CChHHHHHHhccccCCHHHHHHHHHHHHhCCEEEEEE-EEEc------C--CCCEEE
Confidence 3445566899999999875321 1110 00 012334445667888999886432 1111 0 012344
Q ss_pred eeEEECCCCCeeee
Q 027467 161 NSFIAGPTGEIVAA 174 (223)
Q Consensus 161 ~S~iv~p~G~il~~ 174 (223)
.+.+++|+|+++..
T Consensus 115 s~~~i~~~G~i~~~ 128 (283)
T 3hkx_A 115 TAELADEHGEVLAS 128 (283)
T ss_dssp EEEEECTTSCEEEE
T ss_pred EEEEEcCCCcEEEE
Confidence 78889999998754
No 19
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=74.14 E-value=7.6 Score=30.41 Aligned_cols=77 Identities=21% Similarity=0.308 Sum_probs=42.9
Q ss_pred HHHHHHHcCCcEEEeeccCCCCCCCCCC------CcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcceeeeee
Q 027467 88 AARAMVLQGAEILFYPTAIGSEPQDDGL------DSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYGN 161 (223)
Q Consensus 88 ~~~~~~~~gadlii~ps~~~~~~~~~~~------~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~~~~G~ 161 (223)
+.+.++.+|+|+|+.|=.+.. ++.... .....+....+..|.+++++++.-. .-... +..++-.
T Consensus 27 ~i~~a~~~gadlvv~PE~~~~-gy~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~-~~~~~--------~~~~yNs 96 (276)
T 2w1v_A 27 LVREAAKQGANIVSLPECFNS-PYGTTYFPDYAEKIPGESTQKLSEVAKESSIYLIGGS-IPEED--------AGKLYNT 96 (276)
T ss_dssp HHHHHHHTTCSEEECCTTTTS-CCSTTTHHHHCBCSSSHHHHHHHHHHHHHTSEEECCC-EEEEE--------TTEEEEE
T ss_pred HHHHHHHCCCCEEEcCCCccc-CCCHHHHHHHhccCCCHHHHHHHHHHHHcCeEEEecc-eeecC--------CCcEEEE
Confidence 344555789999999987642 221110 0012344445566778888876321 10000 1134457
Q ss_pred eEEECCCCCeeee
Q 027467 162 SFIAGPTGEIVAA 174 (223)
Q Consensus 162 S~iv~p~G~il~~ 174 (223)
+.+++|+|+++..
T Consensus 97 ~~~i~~~G~i~~~ 109 (276)
T 2w1v_A 97 CSVFGPDGSLLVK 109 (276)
T ss_dssp EEEECTTSCEEEE
T ss_pred EEEECCCCcEEEE
Confidence 7888999988653
No 20
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=73.62 E-value=10 Score=32.04 Aligned_cols=79 Identities=10% Similarity=0.021 Sum_probs=43.9
Q ss_pred HHHHHHHcCCcEEEeeccCCCCCCCCCCC----c---HHHHHHHHHHHHhhcCceEEEEcCC--CccccccccCCcceee
Q 027467 88 AARAMVLQGAEILFYPTAIGSEPQDDGLD----S---RDHWRRVMQGHAGANVVPLVASNRI--GKEIIETEHGKSQITF 158 (223)
Q Consensus 88 ~~~~~~~~gadlii~ps~~~~~~~~~~~~----~---~~~~~~~~~~rA~e~~~~vv~an~~--G~~~~~~~~g~~~~~~ 158 (223)
+.+.++.+|+|+|+.|=.+... +..... . ...+....+..|.+++++++.-... -... +..+
T Consensus 38 li~~A~~~gadlvv~PE~~~~~-~~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G~~~~~e~~~--------~~~~ 108 (440)
T 1ems_A 38 MIERAGEKKCEMVFLPECFDFI-GLNKNEQIDLAMATDCEYMEKYRELARKHNIWLSLGGLHHKDPSD--------AAHP 108 (440)
T ss_dssp HHHHHHHTTCSEEEECTTCSCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTE--------EEEE
T ss_pred HHHHHHHCCCCEEECCCccccc-CcchhHHHHhhccCCCHHHHHHHHHHHHcCeEEEeccccccccCC--------CCcE
Confidence 4445567899999999876421 110000 0 0123334455688899988643211 0000 1234
Q ss_pred eeeeEEECCCCCeeeec
Q 027467 159 YGNSFIAGPTGEIVAAA 175 (223)
Q Consensus 159 ~G~S~iv~p~G~il~~~ 175 (223)
+-.+.+++|+|+++..-
T Consensus 109 yNs~~~i~~~G~i~~~y 125 (440)
T 1ems_A 109 WNTHLIIDSDGVTRAEY 125 (440)
T ss_dssp EEEEEEECTTSCEEEEE
T ss_pred EEEEEEECCCCcEEEEE
Confidence 55788889999976643
No 21
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=72.15 E-value=18 Score=30.27 Aligned_cols=79 Identities=13% Similarity=0.185 Sum_probs=44.6
Q ss_pred HHHHHHHcCCcEEEeeccCCCCCCCCC---------C-Cc--HHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcc
Q 027467 88 AARAMVLQGAEILFYPTAIGSEPQDDG---------L-DS--RDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQ 155 (223)
Q Consensus 88 ~~~~~~~~gadlii~ps~~~~~~~~~~---------~-~~--~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~ 155 (223)
+.+.++.+|+|||+.|=.|.. ++... + .. ...+....+..|.+++++++..- .-... .. +
T Consensus 104 li~~A~~~gadLVVfPE~~l~-gy~~~~~~~~~~~~~ae~~~~~~~~~~l~~lA~~~~i~Iv~G~-~e~~~-----~~-~ 175 (405)
T 2vhh_A 104 MIKAAAEAGCNIVCTQEAWTM-PFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSI-LERDM-----EH-G 175 (405)
T ss_dssp HHHHHHHTTCSEEECCTTTTS-CSCC---------CCCBCTTTSHHHHHHHHHHHHTTCEEEEEE-EEEET-----TT-T
T ss_pred HHHHHHHCCCCEEEcCCcccc-cccccccchhhHHHHHhhccCCHHHHHHHHHHHHCCEEEEEec-eeccc-----CC-C
Confidence 344556789999999987642 22110 0 00 12334455667888999887531 11000 00 1
Q ss_pred eeeeeeeEEECCCCCeeee
Q 027467 156 ITFYGNSFIAGPTGEIVAA 174 (223)
Q Consensus 156 ~~~~G~S~iv~p~G~il~~ 174 (223)
..++-.+.+++|+|+++..
T Consensus 176 ~~~yNsa~vi~p~G~i~~~ 194 (405)
T 2vhh_A 176 ETIWNTAVVISNSGRYLGK 194 (405)
T ss_dssp TEEEEEEEEECTTSCEEEE
T ss_pred CcEEEEEEEECCCCeEEEE
Confidence 2345578889999987653
No 22
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=62.64 E-value=15 Score=29.77 Aligned_cols=73 Identities=21% Similarity=0.247 Sum_probs=40.4
Q ss_pred cCCcEEEeeccCCCC-CCCCCC------CcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcceeeeeeeEEECC
Q 027467 95 QGAEILFYPTAIGSE-PQDDGL------DSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYGNSFIAGP 167 (223)
Q Consensus 95 ~gadlii~ps~~~~~-~~~~~~------~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~~~~G~S~iv~p 167 (223)
.|+|||+.|=.+... +++... .....+....+..|.+++++++.-. ..... .+...+.-.+.+++|
T Consensus 51 ~gadLVVfPE~~l~G~~~~~~~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~-~e~~~------~~~~~~yNsa~vi~p 123 (334)
T 2dyu_A 51 PGVELIIFPEYSTQGLNTAKWLSEEFLLDVPGKETELYAKACKEAKVYGVFSI-MERNP------DSNKNPYNTAIIIDP 123 (334)
T ss_dssp TTEEEEECCTTTTTCCCTTTTTSGGGCBCSSSHHHHHHHHHHHHHTCEEEEEE-EECCS------STTSCCEEEEEEECT
T ss_pred CCCcEEEcCCCccccCCCChhHHHHhhccCCCHHHHHHHHHHHHhCeEEEEee-EEECC------CCCceeEEEEEEECC
Confidence 699999999875432 121110 0012344455666778898876532 11110 001114457888999
Q ss_pred CCCeeee
Q 027467 168 TGEIVAA 174 (223)
Q Consensus 168 ~G~il~~ 174 (223)
+|+++..
T Consensus 124 ~G~i~~~ 130 (334)
T 2dyu_A 124 QGEIILK 130 (334)
T ss_dssp TSCEEEE
T ss_pred CCCEEEE
Confidence 9998754
No 23
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=62.55 E-value=13 Score=29.33 Aligned_cols=81 Identities=12% Similarity=0.118 Sum_probs=42.4
Q ss_pred HHHHHHHcCCcEEEeeccCCCCC--CC---------CCCCc--HHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCc
Q 027467 88 AARAMVLQGAEILFYPTAIGSEP--QD---------DGLDS--RDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKS 154 (223)
Q Consensus 88 ~~~~~~~~gadlii~ps~~~~~~--~~---------~~~~~--~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~ 154 (223)
+.+.++.+|+|+|+.|=.+...- .+ ..... ...+....+..|.+++++++.-. .-... .+ .
T Consensus 30 ~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~-~~~~~----~~-~ 103 (303)
T 1uf5_A 30 MLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFEKAAELGIGFNLGY-AELVV----EG-G 103 (303)
T ss_dssp HHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHHHHHHHHHTCEEEEEE-EEEEE----ET-T
T ss_pred HHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhhcCCCHHHHHHHHHHHHhCeEEEEee-eEecC----CC-C
Confidence 34455578999999998754311 11 00000 11222334556778898876532 11100 00 0
Q ss_pred ceeeeeeeEEECCCCCeeee
Q 027467 155 QITFYGNSFIAGPTGEIVAA 174 (223)
Q Consensus 155 ~~~~~G~S~iv~p~G~il~~ 174 (223)
...+.-.+.+++|+|+++..
T Consensus 104 ~~~~yNs~~~i~~~G~i~~~ 123 (303)
T 1uf5_A 104 VKRRFNTSILVDKSGKIVGK 123 (303)
T ss_dssp EEEEEEEEEEECTTSCEEEE
T ss_pred CcceeeEEEEECCCCCEeee
Confidence 11345577888999987653
No 24
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=60.82 E-value=10 Score=30.74 Aligned_cols=22 Identities=23% Similarity=0.202 Sum_probs=19.1
Q ss_pred eEEEEEECCCCceeeeeeccCC
Q 027467 25 YNSIAIIDADGSDLGLYRKSHI 46 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y~K~~l 46 (223)
+=+.++||++|.|...|+|...
T Consensus 102 ~r~tfiId~~G~i~~~~~~v~~ 123 (322)
T 4eo3_A 102 VRSTFLIDRWGFVRKEWRRVKV 123 (322)
T ss_dssp CCEEEEECTTSBEEEEEESCCS
T ss_pred ccEEEEECCCCEEEEEEeCCCc
Confidence 4478999999999999999875
No 25
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=56.95 E-value=18 Score=27.99 Aligned_cols=68 Identities=12% Similarity=0.183 Sum_probs=39.0
Q ss_pred HcCCcEEEeeccCCCCCCCCCC-----CcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcceeeeeeeEEECCC
Q 027467 94 LQGAEILFYPTAIGSEPQDDGL-----DSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYGNSFIAGPT 168 (223)
Q Consensus 94 ~~gadlii~ps~~~~~~~~~~~-----~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~~~~G~S~iv~p~ 168 (223)
.+|+|+|+.|=.+... +.... .....+....+..|.+++++++.-... .. +..++-.+.+++|+
T Consensus 33 ~~gadlvv~PE~~~~g-y~~~~~~~a~~~~~~~~~~l~~~a~~~~~~iv~G~~~-~~---------~~~~yNs~~~i~~~ 101 (266)
T 2e11_A 33 AGQSDLVILPETFTSG-FSNEAIDKAEDMDGPTVAWIRTQAARLGAAITGSVQL-RT---------EHGVFNRLLWATPD 101 (266)
T ss_dssp TTTCSEEECCTTTTTC-SCSGGGGGCEETTSHHHHHHHHHHHHHTSEEEEEEEE-EE---------TTEEEEEEEEECTT
T ss_pred cCCCCEEECCCCcccc-CChhHHHhhccCCCHHHHHHHHHHHHhCCEEEEeeeE-cc---------CCcEEEEEEEECCC
Confidence 4689999999875431 21100 001234445556677889888643211 11 11344577888999
Q ss_pred CCee
Q 027467 169 GEIV 172 (223)
Q Consensus 169 G~il 172 (223)
|+++
T Consensus 102 G~i~ 105 (266)
T 2e11_A 102 GALQ 105 (266)
T ss_dssp SCEE
T ss_pred CCEE
Confidence 9876
No 26
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=56.07 E-value=21 Score=28.04 Aligned_cols=79 Identities=15% Similarity=0.193 Sum_probs=42.8
Q ss_pred HHHHH--HHcCCcEEEeeccCCCCCCCCC-------CC-cH--HHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcc
Q 027467 88 AARAM--VLQGAEILFYPTAIGSEPQDDG-------LD-SR--DHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQ 155 (223)
Q Consensus 88 ~~~~~--~~~gadlii~ps~~~~~~~~~~-------~~-~~--~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~ 155 (223)
+.+.+ +.+|+|+|+.|=.+.. ++... .. .. ..+....+..|.+++++++.-. .-... +. .
T Consensus 35 ~i~~a~~~~~gadlvv~PE~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~-~~~~~-----~~-~ 106 (291)
T 1f89_A 35 FIERAMKEQPDTKLVVLPECFNS-PYSTDQFRKYSEVINPKEPSTSVQFLSNLANKFKIILVGGT-IPELD-----PK-T 106 (291)
T ss_dssp HHHHHHHHCTTEEEEECCTTTTS-CSCHHHHHHHTTBCCSSSCCHHHHHHHHHHHHSSCEEECCC-EEEEC-----TT-T
T ss_pred HHHHHhhccCCCeEEEcCCCccc-CCChHHHHHHhhhhccCCCChHHHHHHHHHHHcCcEEEece-eeccc-----CC-C
Confidence 34444 5679999999987642 22110 00 00 2334445566788898876421 10000 00 0
Q ss_pred eeeeeeeEEECCCCCeeee
Q 027467 156 ITFYGNSFIAGPTGEIVAA 174 (223)
Q Consensus 156 ~~~~G~S~iv~p~G~il~~ 174 (223)
..++-.+.+++|+|+++..
T Consensus 107 ~~~yNs~~~i~~~G~i~~~ 125 (291)
T 1f89_A 107 DKIYNTSIIFNEDGKLIDK 125 (291)
T ss_dssp CCEEEEEEEECTTSCEEEE
T ss_pred CceEEEEEEECCCCcEEeE
Confidence 1344578888999997654
No 27
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=46.05 E-value=1.1e+02 Score=24.83 Aligned_cols=65 Identities=17% Similarity=0.073 Sum_probs=47.1
Q ss_pred CceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCc
Q 027467 72 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 144 (223)
Q Consensus 72 ~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~ 144 (223)
.-+|.++-+|=-.-+++.+.+.+.|++-||.-+.- ....+ ..|.. .-.+|.+.|++||.+.++..
T Consensus 217 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G------~Gn~p-~~~~~-~l~~a~~~Gi~VV~~Sr~~~ 281 (327)
T 1o7j_A 217 LPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMG------AGSVS-VRGIA-GMRKALEKGVVVMRSTRTGN 281 (327)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBT------TTBCC-HHHHH-HHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeEC------CCCCC-HHHHH-HHHHHHHCCceEEEECCCCC
Confidence 45899999999999999999988899988886541 11112 23322 33457789999999999763
No 28
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=44.86 E-value=85 Score=25.41 Aligned_cols=65 Identities=14% Similarity=0.086 Sum_probs=47.1
Q ss_pred CceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCc
Q 027467 72 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 144 (223)
Q Consensus 72 ~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~ 144 (223)
.-+|.++-+|=-.-+++.+.+.+.|++-||.-+.- . ...+ ..|.. .-.+|.+.|++||.+.++..
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G-~-----Gn~p-~~~~~-~l~~a~~~gi~VV~~Sr~~~ 279 (330)
T 1wsa_A 215 LPRVDILYAHPDDTDVLVNAALQAGAKGIIHAGMG-N-----GNPF-PLTQN-ALEKAAKSGVVVARSSRVGS 279 (330)
T ss_dssp CCCEEEEECCSSCCSHHHHHHHHTTCSEEEEEEBT-T-----TBCC-HHHHH-HHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeEC-C-----CCCC-HHHHH-HHHHHHHCCCEEEEECCCCC
Confidence 45999999999999999999988899988886541 1 1112 22322 23457789999999999763
No 29
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=44.79 E-value=13 Score=26.51 Aligned_cols=18 Identities=0% Similarity=-0.053 Sum_probs=14.8
Q ss_pred EEEEECCCCceeeeeecc
Q 027467 27 SIAIIDADGSDLGLYRKS 44 (223)
Q Consensus 27 s~~vi~~~G~i~~~y~K~ 44 (223)
+.++||++|+++..|...
T Consensus 129 ~~~lID~~G~i~~~~~g~ 146 (170)
T 3me7_A 129 VVVVLSPELQIKDYIYGV 146 (170)
T ss_dssp EEEEECTTSBEEEEEESS
T ss_pred eEEEECCCCeEEEEEeCC
Confidence 589999999998777554
No 30
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=44.62 E-value=85 Score=25.43 Aligned_cols=65 Identities=18% Similarity=0.168 Sum_probs=47.3
Q ss_pred CceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCc
Q 027467 72 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 144 (223)
Q Consensus 72 ~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~ 144 (223)
.-+|.++-+|=-.-+++.+.+.+.|++-||.-+.- . ...+ ..|.. .-.+|.+.|++||.+.++..
T Consensus 218 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G-~-----Gn~p-~~~~~-~l~~a~~~Gi~VV~~Sr~~~ 282 (332)
T 2wlt_A 218 LPKVDIIYTHAGMTPDLFQASLNSHAKGVVIAGVG-N-----GNVS-AGFLK-AMQEASQMGVVIVRSSRVGS 282 (332)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBT-T-----TBCC-HHHHH-HHHHHHHTTCEEEEEESSSS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeEC-C-----CCCC-HHHHH-HHHHHHHCCCEEEEECCCCC
Confidence 46999999999999999999988899988886541 1 1112 22322 23457789999999999763
No 31
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=43.50 E-value=1.2e+02 Score=24.43 Aligned_cols=65 Identities=17% Similarity=0.129 Sum_probs=47.1
Q ss_pred CceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCc
Q 027467 72 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 144 (223)
Q Consensus 72 ~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~ 144 (223)
.-+|.++-+|=-.-+++.+.+.+.|++-||.-+.- ....+ ..|.. .-.+|.+.|++||.+.++..
T Consensus 211 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVl~~~G------~Gn~p-~~~~~-~l~~a~~~gi~VV~~Sr~~~ 275 (326)
T 1nns_A 211 LPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVG------NGNLY-KSVFD-TLATAAKTGTAVVRSSRVPT 275 (326)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEBT------TTBCC-HHHHH-HHHHHHHTTCEEEEEESSSS
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeEC------CCCCC-HHHHH-HHHHHHHCCCEEEEECCCCC
Confidence 35899999999999999999988899988886541 11112 22322 33467789999999999763
No 32
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=43.21 E-value=48 Score=22.79 Aligned_cols=16 Identities=25% Similarity=0.436 Sum_probs=13.6
Q ss_pred EEEEECCCCceeeeee
Q 027467 27 SIAIIDADGSDLGLYR 42 (223)
Q Consensus 27 s~~vi~~~G~i~~~y~ 42 (223)
+.++||++|+++..|.
T Consensus 129 ~~~lid~~G~i~~~~~ 144 (164)
T 2ggt_A 129 IMYLIGPDGEFLDYFG 144 (164)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred eEEEECCCCeEEEEeC
Confidence 7899999999987664
No 33
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=42.90 E-value=35 Score=26.00 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=20.0
Q ss_pred HHHHHcCcEEeeeeeeecCCceeEEEEEECCCCceee
Q 027467 3 ELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLG 39 (223)
Q Consensus 3 ~~A~~~~i~i~~G~~~~~~~~~yNs~~vi~~~G~i~~ 39 (223)
++|+.||++. ...+..+-+.++|||+|.|..
T Consensus 131 ~va~~yGv~~------~~~g~~~R~tFiIDp~g~Ir~ 161 (219)
T 3tue_A 131 NIARSYGVLE------ESQGVAYRGLFIIDPHGMLRQ 161 (219)
T ss_dssp HHHHHTTCEE------TTTTEECEEEEEECTTSBEEE
T ss_pred HHHHHcCCcc------cCCCeeEEEEEEECCCCeEEE
Confidence 4666666652 223445677899999998743
No 34
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=42.84 E-value=25 Score=24.51 Aligned_cols=17 Identities=12% Similarity=0.268 Sum_probs=14.0
Q ss_pred eEEEEEECCCCceeeee
Q 027467 25 YNSIAIIDADGSDLGLY 41 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y 41 (223)
.-+.++||++|+|+..+
T Consensus 125 ~p~~~lid~~G~i~~~~ 141 (163)
T 3gkn_A 125 ERSTFLLSPEGQVVQAW 141 (163)
T ss_dssp CCEEEEECTTSCEEEEE
T ss_pred ceEEEEECCCCeEEEEE
Confidence 45689999999998777
No 35
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=40.94 E-value=77 Score=25.80 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=46.5
Q ss_pred CceEEEEEeecC-CCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCC
Q 027467 72 FAKIGVAICWDQ-WFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIG 143 (223)
Q Consensus 72 ~~~ig~~IC~D~-~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G 143 (223)
.-+|.++-+|-- .-+++.+.+...|++-||.-+.- ....+ ..|.. .-.+|.+.|++||.+.++.
T Consensus 220 ~~~V~il~~~pG~~~~~~l~a~~~~g~~GiVle~~G------~Gn~p-~~~~~-~l~~a~~~Gi~VV~~Src~ 284 (334)
T 3nxk_A 220 LPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSG------AGSIH-KNQKD-VLKELLKKGLKVVVSSRVV 284 (334)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHHTTCCEEEEEEBT------TTBCC-HHHHH-HHHHHHTTTCEEEEEESSS
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeEC------CCCCc-HHHHH-HHHHHHHCCCEEEEeCCCC
Confidence 458999999998 88899998888999998886541 11112 22322 3346778999999999986
No 36
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=40.09 E-value=30 Score=24.85 Aligned_cols=16 Identities=13% Similarity=0.113 Sum_probs=13.1
Q ss_pred EEEEEECCCCceeeee
Q 027467 26 NSIAIIDADGSDLGLY 41 (223)
Q Consensus 26 Ns~~vi~~~G~i~~~y 41 (223)
-+.++||++|+|+..+
T Consensus 142 p~~~lID~~G~I~~~~ 157 (179)
T 3ixr_A 142 RSTFLIGPTHRIVEAW 157 (179)
T ss_dssp CEEEEECTTSBEEEEE
T ss_pred eEEEEECCCCEEEEEE
Confidence 3589999999988766
No 37
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=39.83 E-value=45 Score=23.19 Aligned_cols=16 Identities=25% Similarity=0.445 Sum_probs=13.5
Q ss_pred EEEEECCCCceeeeee
Q 027467 27 SIAIIDADGSDLGLYR 42 (223)
Q Consensus 27 s~~vi~~~G~i~~~y~ 42 (223)
+.++||++|+++.+|.
T Consensus 132 ~~~lid~~G~i~~~~~ 147 (171)
T 2rli_A 132 AIYLLNPDGLFTDYYG 147 (171)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred eEEEECCCCeEEEEEC
Confidence 7899999999987654
No 38
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=39.74 E-value=72 Score=26.23 Aligned_cols=66 Identities=14% Similarity=0.085 Sum_probs=46.9
Q ss_pred CceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcH-HHHHHHHHHHHhhcCceEEEEcCCCc
Q 027467 72 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSR-DHWRRVMQGHAGANVVPLVASNRIGK 144 (223)
Q Consensus 72 ~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~-~~~~~~~~~rA~e~~~~vv~an~~G~ 144 (223)
.-+|.++-+|=-.-+++.+.+.+.|++-||.-+.-. ...+. ..|.. .-.+|.+.|++||.+.++..
T Consensus 229 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVle~~G~------Gn~p~~~~~~~-~l~~a~~~Gi~VV~~Src~~ 295 (358)
T 2him_A 229 PQPIGVVTIYPGISADVVRNFLRQPVKALILRSYGV------GNAPQNKAFLQ-ELQEASDRGIVVVNLTQCMS 295 (358)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTSSSCSEEEEEEBTT------TBCCCCHHHHH-HHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEecCCC------CCCCCcHHHHH-HHHHHHHCCCEEEEEcCCCC
Confidence 468999999988899999988888999888865411 11111 12322 23467789999999999763
No 39
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=39.37 E-value=15 Score=17.45 Aligned_cols=17 Identities=18% Similarity=0.175 Sum_probs=14.5
Q ss_pred eeeEEECCCCCeeeecC
Q 027467 160 GNSFIAGPTGEIVAAAD 176 (223)
Q Consensus 160 G~S~iv~p~G~il~~~~ 176 (223)
..|.|+|.+|+.+.++.
T Consensus 5 ~ss~IYD~~g~~i~~lg 21 (26)
T 2v2f_A 5 TSSKIYDNKNQLIADLG 21 (26)
T ss_pred CCCEEEeCCCCEeeecc
Confidence 37899999999998874
No 40
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=38.39 E-value=1.1e+02 Score=23.70 Aligned_cols=59 Identities=10% Similarity=0.075 Sum_probs=35.2
Q ss_pred EEEEeecCCCchHHHHHHHcCCcEEEe--eccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEE
Q 027467 76 GVAICWDQWFPEAARAMVLQGAEILFY--PTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVAS 139 (223)
Q Consensus 76 g~~IC~D~~~pe~~~~~~~~gadlii~--ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~a 139 (223)
.+++|.|.. +++.+.+..+|+|+||. |..|.. ...- ....+..-...+++++++.+.++
T Consensus 40 ~I~~alD~t-~~vi~eAi~~gadlIitHHP~~f~~--~~~~--~~~~~~~~~i~~li~~~I~lya~ 100 (267)
T 2fyw_A 40 RVMVALDIR-EETVAEAIEKGVDLIIVKHAPIFRP--IKDL--LASRPQNQIYIDLIKHDIAVYVS 100 (267)
T ss_dssp EEEEESCCC-HHHHHHHHHTTCSEEEESSCSCCSC--CCCC--CTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccCC--cccc--ccCchHHHHHHHHHHCCCeEEEe
Confidence 467778775 66668888899999997 444422 1111 01122223334567788888654
No 41
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=38.00 E-value=1.1e+02 Score=23.34 Aligned_cols=57 Identities=11% Similarity=-0.059 Sum_probs=33.7
Q ss_pred EEEEeecCCCchHHHHHHHcCCcEEEe--eccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEE
Q 027467 76 GVAICWDQWFPEAARAMVLQGAEILFY--PTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVAS 139 (223)
Q Consensus 76 g~~IC~D~~~pe~~~~~~~~gadlii~--ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~a 139 (223)
.+++|.|.. +++.+.+..+|+|+||. |..| .. .... ..+..-...+++++++.+.++
T Consensus 38 ~I~~alD~t-~~vi~eAi~~~adlIitHHp~~f-~~--~~~~---~~~~~~~i~~li~~~I~ly~~ 96 (242)
T 2yyb_A 38 KVGAAVDAG-EAIFRKALEEEVDFLIVHHGLFW-GK--PFPI---VGHHKRRLETLFQGGINLYAA 96 (242)
T ss_dssp CEEEEEECS-HHHHHHHHHTTCSEEEEEECSCS-SC--CCCS---CHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCCcCc-Cc--cccc---ccHHHHHHHHHHHCCCeEEEe
Confidence 366677765 66667888899999996 5555 21 1111 122233334566777777554
No 42
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=37.59 E-value=95 Score=25.96 Aligned_cols=59 Identities=17% Similarity=0.142 Sum_probs=37.3
Q ss_pred EEEEeecCCCchHHHHHHHcCCcEEEe--eccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEE
Q 027467 76 GVAICWDQWFPEAARAMVLQGAEILFY--PTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVAS 139 (223)
Q Consensus 76 g~~IC~D~~~pe~~~~~~~~gadlii~--ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~a 139 (223)
.+++|.|.. +++.+.+..+|||+||. |--|.. ...- ....+..-...++++|++.+.++
T Consensus 66 ~Vl~alD~t-~~Vv~eAi~~gadlIItHHPlif~~--lk~i--~~~~~~~r~i~~li~~~Iavya~ 126 (397)
T 2gx8_A 66 HVLIALDVT-EEVVDEAIQLGANVIIAHHPLIFNP--LKAI--HTDKAYGKIIEKCIKNDIAIYAA 126 (397)
T ss_dssp EEEEESSCC-HHHHHHHHHHTCCEEEESSCSCCSC--CSCC--CTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccCC--cccc--CcCcHHHHHHHHHHHCCCeEEEe
Confidence 577888875 67778888899999997 444421 1111 12223333445677888888655
No 43
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=36.08 E-value=50 Score=25.06 Aligned_cols=29 Identities=28% Similarity=0.526 Sum_probs=18.4
Q ss_pred HHHHHcCcEEeeeeeeecCCceeEEEEEECCCCce
Q 027467 3 ELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSD 37 (223)
Q Consensus 3 ~~A~~~~i~i~~G~~~~~~~~~yNs~~vi~~~G~i 37 (223)
++|+.|++.. ...+..+-+.++|||+|.|
T Consensus 127 ~vak~YGv~~------~~~g~~~R~tFiID~~G~I 155 (216)
T 3sbc_A 127 SLSRDYGVLI------EEEGVALRGLFIIDPKGVI 155 (216)
T ss_dssp HHHHHHTCEE------TTTTEECEEEEEECTTSBE
T ss_pred HHHHHcCCee------ccCCceeeEEEEECCCCeE
Confidence 4566666543 1223445678999999976
No 44
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=32.90 E-value=33 Score=24.30 Aligned_cols=15 Identities=20% Similarity=0.368 Sum_probs=11.6
Q ss_pred EEEEECCCCceeeee
Q 027467 27 SIAIIDADGSDLGLY 41 (223)
Q Consensus 27 s~~vi~~~G~i~~~y 41 (223)
+.++||++|.|...+
T Consensus 123 ~tflID~~G~I~~~~ 137 (164)
T 4gqc_A 123 AVFIVKPDGTVAYKW 137 (164)
T ss_dssp EEEEECTTSBEEEEE
T ss_pred EEEEECCCCEEEEEE
Confidence 578999999885443
No 45
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=31.78 E-value=43 Score=23.80 Aligned_cols=19 Identities=26% Similarity=0.394 Sum_probs=15.8
Q ss_pred EEEEECCCCceeeeeeccC
Q 027467 27 SIAIIDADGSDLGLYRKSH 45 (223)
Q Consensus 27 s~~vi~~~G~i~~~y~K~~ 45 (223)
+.++||++|+++..|....
T Consensus 136 ~~~liD~~G~i~~~~~g~~ 154 (170)
T 4hde_A 136 SFYLIDQNGKVMKKYSGIS 154 (170)
T ss_dssp EEEEECTTSCEEEEEESSS
T ss_pred EEEEEcCCCeEEEEECCCC
Confidence 6799999999998887543
No 46
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=31.37 E-value=1.5e+02 Score=23.99 Aligned_cols=64 Identities=13% Similarity=0.139 Sum_probs=45.6
Q ss_pred CceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHh-hcCceEEEEcCCC
Q 027467 72 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAG-ANVVPLVASNRIG 143 (223)
Q Consensus 72 ~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~-e~~~~vv~an~~G 143 (223)
.-+|.++-+|=-.-+++.+.+...|++-||.-..- .+ ..+ ..|.. .-.+|. +.|++||.+.++.
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G-~G-----n~p-~~~~~-~l~~a~~~~gi~VV~~Sr~~ 279 (331)
T 1agx_A 215 LPGVQIVYGSDNMMPDAYQAFAKAGVKAIIHAGTG-NG-----SMA-NYLVP-EVRKLHDEQGLQIVRSSRVA 279 (331)
T ss_dssp CCCEEEEECCSSCCTHHHHHHHTTTCSEEEEEEBT-TT-----BCC-TTHHH-HHHHHHHTTCCEEEEEESSC
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeEC-CC-----CCC-HHHHH-HHHHHHHcCCCEEEEECCCC
Confidence 45899999999999999998888899988886541 11 111 22222 223566 8899999999976
No 47
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=30.50 E-value=96 Score=24.14 Aligned_cols=55 Identities=15% Similarity=0.174 Sum_probs=39.1
Q ss_pred EEEEEeecCCCchHHHHHHHc--CCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcC
Q 027467 75 IGVAICWDQWFPEAARAMVLQ--GAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNR 141 (223)
Q Consensus 75 ig~~IC~D~~~pe~~~~~~~~--gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~ 141 (223)
+++.||-|.+.|+..+...+. |+++|-..+. ..+.+..+.. .+.++++++|.--.
T Consensus 68 ~~~pisIDT~~~~v~~aAl~a~~Ga~iINdvs~-----------~~d~~~~~~~-~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 68 SNLTLCLDSTNIKAIEAGLKKCKNRAMINSTNA-----------EREKVEKLFP-LAVEHGAALIGLTM 124 (262)
T ss_dssp CCSEEEEECSCHHHHHHHHHHCSSCEEEEEECS-----------CHHHHHHHHH-HHHHTTCEEEEESC
T ss_pred CCCeEEEeCCCHHHHHHHHhhCCCCCEEEECCC-----------CcccHHHHHH-HHHHhCCcEEEEcC
Confidence 467889999999999988887 9999987665 1233334444 45678888766543
No 48
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=30.32 E-value=1.1e+02 Score=25.38 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=36.4
Q ss_pred EEEEeecCCCchHHHHHHHcCCcEEEe--eccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEE
Q 027467 76 GVAICWDQWFPEAARAMVLQGAEILFY--PTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVAS 139 (223)
Q Consensus 76 g~~IC~D~~~pe~~~~~~~~gadlii~--ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~a 139 (223)
.+++|.|.. +++.+.+..+|||+||. |--|.. ...- ....+ .-.-.++++|++.+.++
T Consensus 42 ~Vl~alD~t-~~Vv~eAi~~~adlIItHHPlif~~--~k~i--~~~~~-~r~i~~li~~~Ialya~ 101 (370)
T 2nyd_A 42 GVLTALDCT-LEVVNEAIEKGYNTIISHHPLIFKG--VTSL--KANGY-GLIIRKLIQHDINLIAM 101 (370)
T ss_dssp CEEEESSCC-HHHHHHHHHHTCCEEEESSCSSCSC--CSCC--CSSTH-HHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCCcccCC--cccc--CcCCH-HHHHHHHHHCCCeEEEe
Confidence 467788875 67778888899999997 444422 1111 11223 33445678899888655
No 49
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=30.18 E-value=1.5e+02 Score=25.03 Aligned_cols=65 Identities=11% Similarity=-0.027 Sum_probs=46.6
Q ss_pred CceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCc
Q 027467 72 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 144 (223)
Q Consensus 72 ~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~ 144 (223)
.-++.++-+|=-.-+++.+.+...|++-||.-+.-. ...+ ..|.. .-.+|.+.|++||.+.++..
T Consensus 304 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVleg~G~------Gn~p-~~~~~-~l~~a~~~Gi~VV~~Sqc~~ 368 (438)
T 1zq1_A 304 EEKVALVKVYPGISSEIIDFLVDKGYKGIVIEGTGL------GHTP-NDIIP-SIERAVEEGVAVCMTSQCIY 368 (438)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTT------TBCC-GGGHH-HHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEECCCCCHHHHHHHHhCCCCEEEEeeECC------CCCC-HHHHH-HHHHHHHCCCEEEEeCCCCC
Confidence 458999999999999999999888999888865411 1111 22222 23356789999999999763
No 50
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=29.66 E-value=75 Score=21.02 Aligned_cols=37 Identities=11% Similarity=0.141 Sum_probs=21.7
Q ss_pred HHHHcCcE-EeeeeeeecCCceeEEEEEECCCCceeeeeec
Q 027467 4 LAKELGVV-MPVSFFEEANNAHYNSIAIIDADGSDLGLYRK 43 (223)
Q Consensus 4 ~A~~~~i~-i~~G~~~~~~~~~yNs~~vi~~~G~i~~~y~K 43 (223)
.+++.|+. ++.+ +.....+.+ +++.||+|..+..+.+
T Consensus 83 ~l~~~G~~~~~~~-p~~~~~G~~--~~~~DPdGn~iel~~~ 120 (128)
T 3g12_A 83 ELVKIPGAMCILD-PTDMPDGKK--AIVLDPDGHSIELCEL 120 (128)
T ss_dssp HHTTSTTCEEEEE-EEECC-CEE--EEEECTTCCEEEEEC-
T ss_pred HHHHCCCceeccC-ceeCCCccE--EEEECCCCCEEEEEEe
Confidence 44566777 5443 322222333 8999999998765544
No 51
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=28.92 E-value=1.7e+02 Score=22.34 Aligned_cols=58 Identities=14% Similarity=-0.024 Sum_probs=34.5
Q ss_pred EEEEeecCCCchHHHHHHHcCCcEEEe--eccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEE
Q 027467 76 GVAICWDQWFPEAARAMVLQGAEILFY--PTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVAS 139 (223)
Q Consensus 76 g~~IC~D~~~pe~~~~~~~~gadlii~--ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~a 139 (223)
.+++|.|.. +++.+.+..+|+|+||. |..|.... ...... ..-...+++++++.+.++
T Consensus 37 ~I~~~lD~t-~~vi~eAi~~~adlIitHHP~~f~~~~--~~i~~~---~~~~i~~li~~~I~ly~~ 96 (247)
T 1nmo_A 37 KIVTGVTAS-QALLDEAVRLGADAVIVHHGYFWKGES--PVIRGM---KRNRLKTLLANDINLYGW 96 (247)
T ss_dssp EEEEEEECC-HHHHHHHHHTTCSEEEEEECSCCTTSC--CCCCTH---HHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHhCCCCEEEECCchhccCCC--ccccch---HHHHHHHHHHCCCEEEEe
Confidence 566777774 46677788899999997 55451111 111111 122334677888888654
No 52
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=28.56 E-value=1.3e+02 Score=19.84 Aligned_cols=15 Identities=0% Similarity=0.102 Sum_probs=12.3
Q ss_pred eeeeEEECCCCCeee
Q 027467 159 YGNSFIAGPTGEIVA 173 (223)
Q Consensus 159 ~G~S~iv~p~G~il~ 173 (223)
.-...++|++|+++.
T Consensus 110 ~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 110 TPTIYLLDGRKRVIL 124 (142)
T ss_dssp SSEEEEECTTCBEEE
T ss_pred CCeEEEECCCCCEEe
Confidence 446789999999986
No 53
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=28.42 E-value=44 Score=23.30 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=11.6
Q ss_pred EEEEECCCCceeeee
Q 027467 27 SIAIIDADGSDLGLY 41 (223)
Q Consensus 27 s~~vi~~~G~i~~~y 41 (223)
+.++||++|+|...+
T Consensus 121 ~tflID~~G~I~~~~ 135 (157)
T 4g2e_A 121 AVFVIDKEGKVRYKW 135 (157)
T ss_dssp EEEEECTTSBEEEEE
T ss_pred eEEEECCCCEEEEEE
Confidence 578999999885444
No 54
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=27.77 E-value=80 Score=23.36 Aligned_cols=17 Identities=24% Similarity=0.362 Sum_probs=12.3
Q ss_pred eEEEEEECCCCceeeee
Q 027467 25 YNSIAIIDADGSDLGLY 41 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y 41 (223)
.-+.++||++|+++..+
T Consensus 142 ~p~~~lID~~G~i~~~~ 158 (213)
T 2i81_A 142 LRAFVLIDMNGIVQHLL 158 (213)
T ss_dssp CEEEEEECTTSBEEEEE
T ss_pred ccEEEEECCCCEEEEEE
Confidence 45678888888876543
No 55
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=27.61 E-value=1.6e+02 Score=24.96 Aligned_cols=65 Identities=12% Similarity=0.062 Sum_probs=46.6
Q ss_pred CceEEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCc
Q 027467 72 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGK 144 (223)
Q Consensus 72 ~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~ 144 (223)
.-++.++-+|=-.-+++.+.+...|++-||.-..-. ...+ ..|.. .-.+|.+.|++||.+.++..
T Consensus 301 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVleg~G~------Gn~p-~~~~~-~l~~a~~~Gi~VV~~Sqc~~ 365 (435)
T 2d6f_A 301 EERVAFIKSYPGISPDIIKWHLDEGYRGIVIEGTGL------GHCP-DTLIP-VIGEAHDMGVPVAMTSQCLN 365 (435)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHTTCSEEEEEEBTT------TBCC-GGGHH-HHHHHHHTTCCEEEEETTCB
T ss_pred CCcEEEEEECCCCCHHHHHHHHhCCCCEEEEecCCC------CCcC-HHHHH-HHHHHHhCCCEEEEeCCCCC
Confidence 469999999999999999999888999888865411 1111 22222 23356789999999999763
No 56
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=27.41 E-value=2.3e+02 Score=24.19 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=26.6
Q ss_pred ceEEEEEeecCCCchHHHHHHHcCCcEEEeecc
Q 027467 73 AKIGVAICWDQWFPEAARAMVLQGAEILFYPTA 105 (223)
Q Consensus 73 ~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~ 105 (223)
.++++.+.....+.+.++.+...|+|+|..-++
T Consensus 218 l~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a 250 (490)
T 4avf_A 218 LRVGAAVGTGADTGERVAALVAAGVDVVVVDTA 250 (490)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred ceeeeeeccccchHHHHHHHhhcccceEEeccc
Confidence 477778877777778888899999999987554
No 57
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=27.19 E-value=2.9e+02 Score=23.56 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=43.8
Q ss_pred eEEEEEECCCCceeeeeeccCCCCCCCCcccccccCCCCCcceEee-CCceEEEEEeecCCCchHHHHHHHcCCcEEEee
Q 027467 25 YNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKIGVAICWDQWFPEAARAMVLQGAEILFYP 103 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y~K~~l~~~~~~~e~~~~~~G~~~~~~~~~-~~~~ig~~IC~D~~~pe~~~~~~~~gadlii~p 103 (223)
...+.|+|.+|++++.-....+-....+. ....+. ...++|..+.....+.+.++.+.+.|+|+|..-
T Consensus 182 i~~lpVVDe~G~l~GiIT~~DIl~~~~~p-----------~a~~d~~grL~v~aavG~~~d~~~~a~~l~~aG~d~I~id 250 (496)
T 4fxs_A 182 VEKILVVNDEFQLKGMITAKDFHKAESKP-----------NACKDEQGRLRVGAAVGAAPGNEERVKALVEAGVDVLLID 250 (496)
T ss_dssp CCCEEEECTTSBCCEEECCC-----CCCT-----------TCCBCTTSCBCCEEECCSSSCCHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEEEcCCCCEEEeehHhHHHHhhccc-----------chhhhcccceeeeeeeccccchHHHHHHHHhccCceEEec
Confidence 34578888888888776666543211100 001111 235778888777778888999999999999886
Q ss_pred cc
Q 027467 104 TA 105 (223)
Q Consensus 104 s~ 105 (223)
++
T Consensus 251 ~a 252 (496)
T 4fxs_A 251 SS 252 (496)
T ss_dssp CS
T ss_pred cc
Confidence 55
No 58
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=27.17 E-value=46 Score=23.29 Aligned_cols=19 Identities=16% Similarity=0.076 Sum_probs=14.5
Q ss_pred eEEEEEECCCCceeeeeec
Q 027467 25 YNSIAIIDADGSDLGLYRK 43 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y~K 43 (223)
.-+.++||++|+|+..+.-
T Consensus 129 ~p~~~liD~~G~i~~~~~~ 147 (166)
T 3p7x_A 129 ARAVFVLDADNKVVYKEIV 147 (166)
T ss_dssp CCEEEEECTTCBEEEEEEC
T ss_pred eeEEEEECCCCeEEEEEEc
Confidence 4568999999998766543
No 59
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=27.15 E-value=1.1e+02 Score=24.52 Aligned_cols=52 Identities=21% Similarity=0.286 Sum_probs=36.9
Q ss_pred EEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEE
Q 027467 75 IGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVAS 139 (223)
Q Consensus 75 ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~a 139 (223)
+++.||-|.+.|+.++.....|+++|--.+... .+ + .+.. .+.++++++|.-
T Consensus 84 ~~vpiSIDT~~~~Va~aAl~aGa~iINDVsg~~---~d------~---~m~~-v~a~~~~~vvlm 135 (314)
T 2vef_A 84 SDVLISIDTWKSQVAEAALAAGADLVNDITGLM---GD------E---KMPH-VVAEARAQVVIM 135 (314)
T ss_dssp CCCEEEEECSCHHHHHHHHHTTCCEEEETTTTC---SC------T---THHH-HHHHHTCEEEEE
T ss_pred CCceEEEeCCCHHHHHHHHHcCCCEEEECCCCC---CC------h---HHHH-HHHHcCCCEEEE
Confidence 478899999999999999999999987765521 11 0 1222 345788887765
No 60
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=26.86 E-value=1e+02 Score=24.21 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=39.9
Q ss_pred EEEEEeecCCCchHHHHHHHc--CCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcC
Q 027467 75 IGVAICWDQWFPEAARAMVLQ--GAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNR 141 (223)
Q Consensus 75 ig~~IC~D~~~pe~~~~~~~~--gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~ 141 (223)
+.+.||-|...|+..+...+. |+++|-..+. . .+.+..+.. .+.++++++|.-..
T Consensus 77 ~~~pisIDT~~~~v~~aal~a~~Ga~iINdvs~----------~-~d~~~~~~~-~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 77 VDLPCCLDSTNPDAIEAGLKVHRGHAMINSTSA----------D-QWKMDIFFP-MAKKYEAAIIGLTM 133 (271)
T ss_dssp CCCCEEEECSCHHHHHHHHHHCCSCCEEEEECS----------C-HHHHHHHHH-HHHHHTCEEEEESC
T ss_pred CCCeEEEeCCCHHHHHHHHHhCCCCCEEEECCC----------C-ccccHHHHH-HHHHcCCCEEEEec
Confidence 477899999999999998888 9999987665 1 243444444 35677888776544
No 61
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=26.72 E-value=1.5e+02 Score=23.31 Aligned_cols=77 Identities=17% Similarity=0.055 Sum_probs=42.5
Q ss_pred CchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCcccccc---ccCCcceeeeee
Q 027467 85 FPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIET---EHGKSQITFYGN 161 (223)
Q Consensus 85 ~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~---~~g~~~~~~~G~ 161 (223)
.++..+.+.+.|+..+++.+. .+ +. .........|.+.++.++..|..|...... ..-.....--|.
T Consensus 77 ~~~~~~ea~~~Gi~~vVi~t~--------G~-~~-~~~~~l~~~a~~~gi~vigPNc~Gii~~~~~~~~~~~~~~~~~G~ 146 (288)
T 1oi7_A 77 AADAALEAAHAGIPLIVLITE--------GI-PT-LDMVRAVEEIKALGSRLIGGNCPGIISAEETKIGIMPGHVFKRGR 146 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCS--------CC-CH-HHHHHHHHHHHHHTCEEEESSSCEEEETTTEEEESSCGGGCCEEE
T ss_pred HHHHHHHHHHCCCCEEEEECC--------CC-CH-HHHHHHHHHHHHcCCEEEeCCCCeEEcCCCceeEEcccCCCCCCC
Confidence 356777888899996665442 01 11 123344556778899999899887643210 000001112455
Q ss_pred eEEECCCCCe
Q 027467 162 SFIAGPTGEI 171 (223)
Q Consensus 162 S~iv~p~G~i 171 (223)
=.++...|.+
T Consensus 147 va~vsqSG~l 156 (288)
T 1oi7_A 147 VGIISRSGTL 156 (288)
T ss_dssp EEEEESCHHH
T ss_pred EEEEECCHHH
Confidence 6666666754
No 62
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=26.54 E-value=1.2e+02 Score=23.92 Aligned_cols=76 Identities=13% Similarity=0.083 Sum_probs=41.7
Q ss_pred chHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCcccccc---ccCCcceeeeeee
Q 027467 86 PEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIET---EHGKSQITFYGNS 162 (223)
Q Consensus 86 pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~---~~g~~~~~~~G~S 162 (223)
++..+.+.+.|+..+++.+. .+ +... .......|.++++.++..|..|...... ..-.....-.|.=
T Consensus 84 ~~~v~ea~~~Gi~~vVi~t~--------G~-~~~~-~~~l~~~A~~~gi~viGPNc~Gii~~~~~~~~~~~~~~~~~G~v 153 (294)
T 2yv1_A 84 KDAVFEAIDAGIELIVVITE--------HI-PVHD-TMEFVNYAEDVGVKIIGPNTPGIASPKVGKLGIIPMEVLKEGSV 153 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCS--------CC-CHHH-HHHHHHHHHHHTCEEECSSCCEEEETTTEEEECCCGGGCCEEEE
T ss_pred HHHHHHHHHCCCCEEEEECC--------CC-CHHH-HHHHHHHHHHcCCEEEcCCCceeeccCcceeeecccCCCCCCCE
Confidence 56677788899996665332 01 1211 2334556777899888888877643210 0000011124656
Q ss_pred EEECCCCCe
Q 027467 163 FIAGPTGEI 171 (223)
Q Consensus 163 ~iv~p~G~i 171 (223)
.++...|.+
T Consensus 154 a~vSqSG~l 162 (294)
T 2yv1_A 154 GMVSRSGTL 162 (294)
T ss_dssp EEEESCSHH
T ss_pred EEEECCHHH
Confidence 666677754
No 63
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=26.31 E-value=1.2e+02 Score=23.96 Aligned_cols=52 Identities=17% Similarity=0.178 Sum_probs=33.1
Q ss_pred CchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccc
Q 027467 85 FPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEI 146 (223)
Q Consensus 85 ~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~ 146 (223)
.++..+.+.+.|+..+++.+. .+ +.+. .......|.++++.++..|..|...
T Consensus 84 ~~~~v~ea~~~Gi~~vVi~t~--------G~-~~~~-~~~l~~~A~~~gi~viGPNc~Gii~ 135 (297)
T 2yv2_A 84 APDAVYEAVDAGIRLVVVITE--------GI-PVHD-TMRFVNYARQKGATIIGPNCPGAIT 135 (297)
T ss_dssp HHHHHHHHHHTTCSEEEECCC--------CC-CHHH-HHHHHHHHHHHTCEEECSSSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEECC--------CC-CHHH-HHHHHHHHHHcCCEEEcCCCCeeEc
Confidence 357788888899996665432 01 1221 2334556678899888899887643
No 64
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=24.90 E-value=1e+02 Score=23.33 Aligned_cols=17 Identities=18% Similarity=0.012 Sum_probs=12.8
Q ss_pred eEEEEEECCCCceeeee
Q 027467 25 YNSIAIIDADGSDLGLY 41 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y 41 (223)
.-+.++||++|+|...+
T Consensus 127 ~p~~fiID~~G~I~~~~ 143 (233)
T 2v2g_A 127 CRAVFIIGPDKKLKLSI 143 (233)
T ss_dssp CEEEEEECTTSBEEEEE
T ss_pred cceEEEECCCCEEEEEE
Confidence 45788999999886554
No 65
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=24.89 E-value=1.6e+02 Score=23.97 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=45.0
Q ss_pred CceEEEEEeecCCCchHHHHHHHcCCcEEEeeccC-CCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCC-C
Q 027467 72 FAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAI-GSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRI-G 143 (223)
Q Consensus 72 ~~~ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~-~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~-G 143 (223)
.-+|.++-+|=-.-+++.+.+...|++-||.-+.- +.. + ..|.. .-.+|.+.|++||.+.++ .
T Consensus 221 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~-------p-~~~~~-~l~~a~~~Gi~VV~~Sr~~~ 285 (337)
T 4pga_A 221 LPQVDIAYSYGNVTDTAYKALAQNGAKALIHAGTGNGSV-------S-SRVVP-ALQQLRKNGTQIIRSSHVNQ 285 (337)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEBTTTBC-------C-TTTHH-HHHHHHHTTCEEEEEESCCS
T ss_pred CCCEEEEEECCCCCHHHHHHHHhcCCCEEEEEEeCCCCC-------C-HHHHH-HHHHHHHCCCEEEEeccCCC
Confidence 45899999998889999998888999988775541 111 1 11222 233567789999999988 5
No 66
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=24.68 E-value=69 Score=22.18 Aligned_cols=17 Identities=18% Similarity=0.237 Sum_probs=13.9
Q ss_pred EEEEEECCCCceeeeee
Q 027467 26 NSIAIIDADGSDLGLYR 42 (223)
Q Consensus 26 Ns~~vi~~~G~i~~~y~ 42 (223)
-+.++||++|+++.++.
T Consensus 129 p~~~lid~~G~i~~~~~ 145 (167)
T 2jsy_A 129 RSVFVLDENGKVVYAEY 145 (167)
T ss_dssp CEEEEECTTSCEEEEEE
T ss_pred eEEEEEcCCCcEEEEEe
Confidence 57899999999877765
No 67
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=24.47 E-value=1.1e+02 Score=22.56 Aligned_cols=18 Identities=22% Similarity=0.230 Sum_probs=13.1
Q ss_pred eeEEEEEECCCCceeeee
Q 027467 24 HYNSIAIIDADGSDLGLY 41 (223)
Q Consensus 24 ~yNs~~vi~~~G~i~~~y 41 (223)
..-+.++||++|+|+..+
T Consensus 138 ~~p~~~lID~~G~I~~~~ 155 (211)
T 2pn8_A 138 TLRGLFIIDDKGILRQIT 155 (211)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred ccceEEEECCCCEEEEEE
Confidence 356788888889876544
No 68
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=24.34 E-value=98 Score=22.10 Aligned_cols=17 Identities=24% Similarity=0.358 Sum_probs=12.2
Q ss_pred eEEEEEECCCCceeeee
Q 027467 25 YNSIAIIDADGSDLGLY 41 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y 41 (223)
.-+.++||++|+++..+
T Consensus 121 ~P~~~liD~~G~i~~~~ 137 (192)
T 2h01_A 121 LRAFVLIDKQGVVQHLL 137 (192)
T ss_dssp CCEEEEECTTSBEEEEE
T ss_pred eeEEEEEcCCCEEEEEE
Confidence 45688888888876544
No 69
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=23.24 E-value=63 Score=20.97 Aligned_cols=18 Identities=28% Similarity=0.370 Sum_probs=14.4
Q ss_pred eEEEEEECCCCceeeeee
Q 027467 25 YNSIAIIDADGSDLGLYR 42 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y~ 42 (223)
+-+.+++|++|+++.++.
T Consensus 105 ~P~~~lid~~G~i~~~~~ 122 (138)
T 4evm_A 105 YPTQAFIDKEGKLVKTHP 122 (138)
T ss_dssp SSEEEEECTTCCEEEEEE
T ss_pred CCeEEEECCCCcEEEeec
Confidence 457899999999876654
No 70
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=23.01 E-value=94 Score=25.07 Aligned_cols=57 Identities=18% Similarity=0.156 Sum_probs=39.9
Q ss_pred EEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCcc
Q 027467 75 IGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKE 145 (223)
Q Consensus 75 ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~ 145 (223)
+++.||-|.+.|+..+.....|+++|--.+... +..+.. .+.+.++++|..-.-|..
T Consensus 104 ~~vpISIDT~~~~Va~aAl~aGa~iINDVsg~~-------------~~~m~~-v~a~~g~~vVlMh~~G~P 160 (314)
T 3tr9_A 104 FPQLISVDTSRPRVMREAVNTGADMINDQRALQ-------------LDDALT-TVSALKTPVCLMHFPSET 160 (314)
T ss_dssp CCSEEEEECSCHHHHHHHHHHTCCEEEETTTTC-------------STTHHH-HHHHHTCCEEEECCCCTT
T ss_pred CCCeEEEeCCCHHHHHHHHHcCCCEEEECCCCC-------------chHHHH-HHHHhCCeEEEECCCCCC
Confidence 478999999999999999989999887655411 012222 344678888876655643
No 71
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=22.81 E-value=1.1e+02 Score=22.72 Aligned_cols=17 Identities=6% Similarity=0.005 Sum_probs=12.3
Q ss_pred eEEEEEECCCCceeeee
Q 027467 25 YNSIAIIDADGSDLGLY 41 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y 41 (223)
.-+.++|||+|+|...+
T Consensus 128 ~p~~flID~~G~I~~~~ 144 (220)
T 1xcc_A 128 CRCLFFISPEKKIKATV 144 (220)
T ss_dssp CEEEEEECTTSBEEEEE
T ss_pred cceEEEECCCCEEEEEE
Confidence 34778899999876544
No 72
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=22.78 E-value=63 Score=22.47 Aligned_cols=17 Identities=12% Similarity=0.145 Sum_probs=14.1
Q ss_pred EEEEEECCCCceeeeee
Q 027467 26 NSIAIIDADGSDLGLYR 42 (223)
Q Consensus 26 Ns~~vi~~~G~i~~~y~ 42 (223)
-+.++||++|+++..+.
T Consensus 127 p~~~liD~~G~i~~~~~ 143 (163)
T 1psq_A 127 RAVFVLDTDNTIRYVEY 143 (163)
T ss_dssp CEEEEECTTCBEEEEEE
T ss_pred EEEEEEcCCCeEEEEEe
Confidence 58899999999876664
No 73
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=22.61 E-value=55 Score=22.75 Aligned_cols=18 Identities=28% Similarity=0.420 Sum_probs=14.3
Q ss_pred EEEEEECCCCceeeeeec
Q 027467 26 NSIAIIDADGSDLGLYRK 43 (223)
Q Consensus 26 Ns~~vi~~~G~i~~~y~K 43 (223)
-+.++||++|+++.+|.-
T Consensus 137 p~~~lid~~G~i~~~~~g 154 (174)
T 1xzo_A 137 SSFYLVGPDGKVLKDYNG 154 (174)
T ss_dssp CEEEEECTTSEEEEEEES
T ss_pred eEEEEECCCCeEEEEEcC
Confidence 367999999999876653
No 74
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=22.00 E-value=36 Score=24.49 Aligned_cols=16 Identities=25% Similarity=0.451 Sum_probs=13.6
Q ss_pred EEEEECCCCceeeeee
Q 027467 27 SIAIIDADGSDLGLYR 42 (223)
Q Consensus 27 s~~vi~~~G~i~~~y~ 42 (223)
+.++||++|+++.++.
T Consensus 151 ~~~liD~~G~i~~~~~ 166 (187)
T 3dwv_A 151 TSFLIDRDGVPVERFS 166 (187)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEECCCCCEEEEEC
Confidence 7899999999977654
No 75
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=21.97 E-value=2.8e+02 Score=22.81 Aligned_cols=81 Identities=12% Similarity=0.003 Sum_probs=48.3
Q ss_pred HHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCccccccccCCcceeeeeeeEEECC
Q 027467 88 AARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGKSQITFYGNSFIAGP 167 (223)
Q Consensus 88 ~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~~~~~~~g~~~~~~~G~S~iv~p 167 (223)
..+.+...++|+||..-. ..-...++.-|...+.+++........+ -...+.+.|.++
T Consensus 98 ~~~~~~~~~~d~IIavGG-------------Gs~~D~AK~iA~~~~~p~i~IPTTagtg---------Sevt~~avi~~~ 155 (387)
T 3uhj_A 98 VRKVAIEHGSDILVGVGG-------------GKTADTAKIVAIDTGARIVIAPTIASTD---------APCSAIAVRYTE 155 (387)
T ss_dssp HHHHHHHHTCSEEEEESS-------------HHHHHHHHHHHHHTTCEEEECCSSCCCS---------TTTSSEEEEECT
T ss_pred HHHHHhhcCCCEEEEeCC-------------cHHHHHHHHHHHhcCCCEEEecCcccCC---------cccCCeEEEEcC
Confidence 344555678898887543 2223456666667788888776643221 223568888888
Q ss_pred CCCee-eecCCCCceEEEEEechh
Q 027467 168 TGEIV-AAADDKEEAVLVAQFDLD 190 (223)
Q Consensus 168 ~G~il-~~~~~~~e~~l~~~i~l~ 190 (223)
+|... .........++++|.++-
T Consensus 156 ~~~~k~~~~~~~~P~~vi~Dp~l~ 179 (387)
T 3uhj_A 156 HGVYEEALRLPRNPDAVVVDSALV 179 (387)
T ss_dssp TSCEEEEEECSCCCSEEEECHHHH
T ss_pred CCceEeeeecCCCCeEEEEChHHH
Confidence 88643 222223466777766553
No 76
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=21.90 E-value=1.7e+02 Score=23.00 Aligned_cols=52 Identities=12% Similarity=0.150 Sum_probs=33.5
Q ss_pred CCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCcc
Q 027467 84 WFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKE 145 (223)
Q Consensus 84 ~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~ 145 (223)
..++....+.+.|+..++..+. .+ ..+. .......|.++++.++..|..|..
T Consensus 76 ~~~~~~~ea~~~Gi~~iVi~t~--------G~-~~~~-~~~l~~~A~~~gv~liGPNc~Gi~ 127 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLIITITE--------GI-PTLD-MLTVKVKLDEAGVRMIGPNTPGVI 127 (288)
T ss_dssp GHHHHHHHHHHTTCSEEEECCC--------CC-CHHH-HHHHHHHHHHHTCEEECSSCCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECC--------CC-CHHH-HHHHHHHHHHcCCEEEecCCccee
Confidence 3467888888999998666332 01 1222 223444677789988888887753
No 77
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=21.66 E-value=2e+02 Score=22.69 Aligned_cols=57 Identities=21% Similarity=0.232 Sum_probs=40.1
Q ss_pred EEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCcc
Q 027467 75 IGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKE 145 (223)
Q Consensus 75 ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~ 145 (223)
+++.||-|.+.|+..+.....|+++|-..+.- .+ ..+.. .+.++++++|..-.-|..
T Consensus 89 ~~~piSIDT~~~~va~aAl~aGa~iINdvsg~----~d---------~~~~~-~~a~~~~~vVlmh~~G~p 145 (282)
T 1aj0_A 89 FEVWISVDTSKPEVIRESAKVGAHIINDIRSL----SE---------PGALE-AAAETGLPVCLMHMQGNP 145 (282)
T ss_dssp CCCEEEEECCCHHHHHHHHHTTCCEEEETTTT----CS---------TTHHH-HHHHHTCCEEEECCSSCT
T ss_pred cCCeEEEeCCCHHHHHHHHHcCCCEEEECCCC----CC---------HHHHH-HHHHhCCeEEEEccCCCC
Confidence 37889999999999999999999999876651 11 11222 345678887766555543
No 78
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=21.24 E-value=68 Score=22.19 Aligned_cols=19 Identities=21% Similarity=0.242 Sum_probs=15.2
Q ss_pred eEEEEEECCCCceeeeeec
Q 027467 25 YNSIAIIDADGSDLGLYRK 43 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y~K 43 (223)
.-+.++||++|+++..+.-
T Consensus 111 ~P~~~lid~~G~i~~~~~g 129 (161)
T 3drn_A 111 ARITFVIDKKGIIRHIYNS 129 (161)
T ss_dssp CCEEEEECTTSBEEEEEEC
T ss_pred cceEEEECCCCEEEEEEec
Confidence 4578999999999876654
No 79
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=20.97 E-value=70 Score=24.33 Aligned_cols=18 Identities=22% Similarity=0.017 Sum_probs=12.7
Q ss_pred eEEEEEECCCCceeeeee
Q 027467 25 YNSIAIIDADGSDLGLYR 42 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y~ 42 (223)
.=+.++||++|.|...+.
T Consensus 137 ~p~tfvID~dG~I~~~~~ 154 (224)
T 3keb_A 137 SPAIILADAANVVHYSER 154 (224)
T ss_dssp CCEEEEECTTCBEEEEEE
T ss_pred cCEEEEEcCCCEEEEEEe
Confidence 346889999998754443
No 80
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=20.88 E-value=1.4e+02 Score=22.62 Aligned_cols=17 Identities=24% Similarity=0.270 Sum_probs=12.4
Q ss_pred eEEEEEECCCCceeeee
Q 027467 25 YNSIAIIDADGSDLGLY 41 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y 41 (223)
.-+.++||++|+|+..+
T Consensus 168 ~p~~flID~~G~I~~~~ 184 (240)
T 3qpm_A 168 LRGLFIIDEKGVLRQIT 184 (240)
T ss_dssp CEEEEEECTTSBEEEEE
T ss_pred cceEEEEcCCCeEEEEE
Confidence 45678999999886543
No 81
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=20.62 E-value=3.5e+02 Score=23.64 Aligned_cols=58 Identities=17% Similarity=0.145 Sum_probs=40.7
Q ss_pred EEEEEeecCCCchHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhc-CceEEEEcCCCcc
Q 027467 75 IGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VVPLVASNRIGKE 145 (223)
Q Consensus 75 ig~~IC~D~~~pe~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~-~~~vv~an~~G~~ 145 (223)
..+.||-|.+.+++++.+...|+++|=-.+.-. .+ . .+.. .+.++ ++++|..-.-|..
T Consensus 310 ~~vpISIDT~~a~VaeaAl~aGadIINDVsg~~---~d----~-----~m~~-vva~~~~~~vVlmH~rG~p 368 (545)
T 2bmb_A 310 DKVILSIDTYRSNVAKEAIKVGVDIINDISGGL---FD----S-----NMFA-VIAENPEICYILSHTRGDI 368 (545)
T ss_dssp GGEEEEEECCCHHHHHHHHHTTCCEEEETTTTS---SC----T-----THHH-HHHTCTTSEEEEECCCSCT
T ss_pred CCCeEEEeCCcHHHHHHHHHcCCCEEEeCCCCc---CC----h-----HHHH-HHHHhCCCeEEEECCCCCC
Confidence 378999999999999999999999987665521 11 1 2222 34577 8888776555654
No 82
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=20.58 E-value=89 Score=26.54 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=37.6
Q ss_pred EEEEEeecCCCchHHHHHHH--cCCcEEEeeccCCCCCCCCCCCcHHHHHHHHHHHHhhcCceEEEEcCCCcc
Q 027467 75 IGVAICWDQWFPEAARAMVL--QGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKE 145 (223)
Q Consensus 75 ig~~IC~D~~~pe~~~~~~~--~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~vv~an~~G~~ 145 (223)
+++.||-|.+.|+.++...+ .|+++.|+-.+- ... ..+.. .+.+.++++|..-.-|..
T Consensus 268 ~~vpISIDT~~~~VaeaAL~~~aGa~i~INDVsg---------~~d---~~m~~-v~a~~g~~vVlMh~~G~P 327 (442)
T 3mcm_A 268 YKPLVSIDTRKLEVMQKILAKHHDIIWMINDVEC---------NNI---EQKAQ-LIAKYNKKYVIIHNLGIT 327 (442)
T ss_dssp SCCEEEEECCCHHHHHHHHHHHGGGCCEEEECCC---------TTH---HHHHH-HHHHHTCEEEEECC----
T ss_pred CCCeEEEeCCCHHHHHHHHhhCCCCCEEEEcCCC---------CCC---hHHHH-HHHHhCCeEEEECCCCCC
Confidence 37899999999999999988 999995664431 011 22332 345788888876555643
No 83
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=20.54 E-value=1.8e+02 Score=19.58 Aligned_cols=38 Identities=13% Similarity=0.164 Sum_probs=24.9
Q ss_pred HHHHHcCcEEeeeeeeecCCceeEEEEEECCCCceeeeeec
Q 027467 3 ELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRK 43 (223)
Q Consensus 3 ~~A~~~~i~i~~G~~~~~~~~~yNs~~vi~~~G~i~~~y~K 43 (223)
+.+++.|+.+..+-.....+ -.+++.||+|..+..+..
T Consensus 81 ~~l~~~G~~v~~~p~~~~~G---~~~~~~DPdG~~iel~~~ 118 (144)
T 3r6a_A 81 TFLEENGAEIIRGPSKVPTG---RNMTVRHSDGSVIEYVEH 118 (144)
T ss_dssp HHHHHTTCEEEEEEEEETTE---EEEEEECTTSCEEEEEEE
T ss_pred HHHHHcCCEEecCCccCCCc---eEEEEECCCCCEEEEEEc
Confidence 34566788877654333333 357999999998766543
No 84
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=20.31 E-value=67 Score=22.48 Aligned_cols=18 Identities=22% Similarity=0.215 Sum_probs=14.7
Q ss_pred eEEEEEECCCCceeeeee
Q 027467 25 YNSIAIIDADGSDLGLYR 42 (223)
Q Consensus 25 yNs~~vi~~~G~i~~~y~ 42 (223)
.-+.++||++|+++..+.
T Consensus 133 ~p~~~liD~~G~i~~~~~ 150 (171)
T 2yzh_A 133 ARAVFIIDKEGKVAYVQL 150 (171)
T ss_dssp CCEEEEECTTSBEEEEEE
T ss_pred eeEEEEEcCCCeEEEEEe
Confidence 357999999999977765
No 85
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=20.30 E-value=68 Score=22.37 Aligned_cols=17 Identities=12% Similarity=0.202 Sum_probs=14.4
Q ss_pred EEEEEECCCCceeeeee
Q 027467 26 NSIAIIDADGSDLGLYR 42 (223)
Q Consensus 26 Ns~~vi~~~G~i~~~y~ 42 (223)
-+.++||++|+|+..+.
T Consensus 131 p~~~liD~~G~i~~~~~ 147 (165)
T 1q98_A 131 RAVIVLDEQNNVLHSQL 147 (165)
T ss_dssp CEEEEECTTSBEEEEEE
T ss_pred eeEEEEcCCCEEEEEEe
Confidence 68999999999977665
Done!