Query 027471
Match_columns 223
No_of_seqs 173 out of 562
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 17:30:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027471.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027471hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dlc_A Putative S-adenosyl-L-m 99.3 3.3E-12 1.1E-16 102.5 5.2 132 73-208 46-214 (219)
2 3dh0_A SAM dependent methyltra 99.2 3E-12 1E-16 104.1 3.7 135 71-208 38-193 (219)
3 3pfg_A N-methyltransferase; N, 99.2 2E-11 6.7E-16 102.6 6.8 134 71-209 51-250 (263)
4 1kpg_A CFA synthase;, cyclopro 99.2 1.1E-11 3.7E-16 105.4 5.2 109 61-172 57-168 (287)
5 1nkv_A Hypothetical protein YJ 99.2 4.5E-12 1.5E-16 105.4 2.6 106 62-173 30-141 (256)
6 3hem_A Cyclopropane-fatty-acyl 99.2 9.5E-12 3.3E-16 107.2 3.8 110 61-172 65-183 (302)
7 3e8s_A Putative SAM dependent 99.2 4.3E-11 1.5E-15 96.5 7.1 129 72-208 54-227 (227)
8 2zfu_A Nucleomethylin, cerebra 99.2 2.3E-10 7.9E-15 93.1 11.5 121 70-208 67-191 (215)
9 3ou2_A SAM-dependent methyltra 99.2 7.1E-11 2.4E-15 95.1 8.2 96 72-173 48-147 (218)
10 2xvm_A Tellurite resistance pr 99.2 1.5E-11 5E-16 97.8 3.9 119 71-193 33-169 (199)
11 2o57_A Putative sarcosine dime 99.1 1.1E-11 3.7E-16 105.9 2.7 101 70-173 82-188 (297)
12 4hg2_A Methyltransferase type 99.1 2.3E-11 7.7E-16 105.6 4.6 92 72-171 41-134 (257)
13 3ofk_A Nodulation protein S; N 99.1 7.8E-12 2.7E-16 101.7 1.4 103 66-173 47-155 (216)
14 2p7i_A Hypothetical protein; p 99.1 2.6E-11 9E-16 98.8 4.4 94 72-173 44-142 (250)
15 2fk8_A Methoxy mycolic acid sy 99.1 2.7E-11 9.1E-16 104.9 4.4 108 62-172 84-194 (318)
16 3hnr_A Probable methyltransfer 99.1 2.6E-10 9E-15 92.6 9.9 131 70-208 45-212 (220)
17 3dli_A Methyltransferase; PSI- 99.1 2.2E-11 7.5E-16 101.2 3.5 96 71-173 42-141 (240)
18 3kkz_A Uncharacterized protein 99.1 4E-11 1.4E-15 101.2 5.0 99 70-172 46-150 (267)
19 1vl5_A Unknown conserved prote 99.1 1.1E-11 3.9E-16 103.9 1.6 99 70-172 37-140 (260)
20 1y8c_A S-adenosylmethionine-de 99.1 9.6E-11 3.3E-15 95.8 7.1 111 50-171 21-141 (246)
21 3bus_A REBM, methyltransferase 99.1 1.8E-11 6.1E-16 102.9 2.8 107 61-172 54-166 (273)
22 3ocj_A Putative exported prote 99.1 3.8E-11 1.3E-15 104.0 4.8 138 71-208 119-304 (305)
23 1xtp_A LMAJ004091AAA; SGPP, st 99.1 2.4E-11 8.1E-16 100.6 3.1 120 68-192 91-233 (254)
24 3lcc_A Putative methyl chlorid 99.1 9.3E-11 3.2E-15 96.9 6.7 117 72-193 68-203 (235)
25 3f4k_A Putative methyltransfer 99.1 1.1E-11 3.8E-16 103.0 1.1 98 71-172 47-150 (257)
26 3jwg_A HEN1, methyltransferase 99.1 2.2E-10 7.4E-15 93.5 8.3 134 71-208 30-210 (219)
27 3ujc_A Phosphoethanolamine N-m 99.1 5.3E-11 1.8E-15 98.6 4.5 97 70-172 55-159 (266)
28 3i9f_A Putative type 11 methyl 99.1 1.4E-10 4.8E-15 90.9 6.2 134 70-214 17-166 (170)
29 1xxl_A YCGJ protein; structura 99.1 2.3E-11 7.8E-16 101.5 1.8 108 60-172 13-124 (239)
30 3grz_A L11 mtase, ribosomal pr 99.1 9.7E-11 3.3E-15 94.9 5.4 129 71-206 61-194 (205)
31 3hm2_A Precorrin-6Y C5,15-meth 99.1 1.4E-10 4.7E-15 90.9 6.1 112 70-192 25-148 (178)
32 3bxo_A N,N-dimethyltransferase 99.1 1.5E-10 5.1E-15 94.7 6.3 97 71-172 41-141 (239)
33 3mti_A RRNA methylase; SAM-dep 99.1 1.5E-10 5.1E-15 92.1 6.1 121 72-192 24-164 (185)
34 4gek_A TRNA (CMO5U34)-methyltr 99.1 2.3E-11 7.9E-16 105.4 1.4 101 72-173 72-179 (261)
35 4dzr_A Protein-(glutamine-N5) 99.1 1.8E-10 6.3E-15 92.0 6.3 157 47-208 12-205 (215)
36 3h2b_A SAM-dependent methyltra 99.0 3.5E-10 1.2E-14 91.0 7.4 132 71-207 42-194 (203)
37 3orh_A Guanidinoacetate N-meth 99.0 2.6E-11 8.8E-16 102.5 0.4 116 50-172 43-170 (236)
38 3sm3_A SAM-dependent methyltra 99.0 3.1E-11 1.1E-15 98.0 0.6 99 71-173 31-142 (235)
39 3e05_A Precorrin-6Y C5,15-meth 99.0 1.2E-10 4.3E-15 94.4 4.1 122 62-192 34-163 (204)
40 3gu3_A Methyltransferase; alph 99.0 6.7E-11 2.3E-15 101.5 2.6 101 70-174 22-128 (284)
41 3vc1_A Geranyl diphosphate 2-C 99.0 1.2E-10 4.1E-15 101.2 4.2 99 70-172 117-221 (312)
42 4htf_A S-adenosylmethionine-de 99.0 5.4E-11 1.8E-15 101.2 1.9 99 72-173 70-174 (285)
43 4e2x_A TCAB9; kijanose, tetron 99.0 4.8E-11 1.7E-15 107.6 1.6 142 44-192 80-248 (416)
44 3g2m_A PCZA361.24; SAM-depende 99.0 5.8E-11 2E-15 102.2 1.7 99 73-173 85-191 (299)
45 1dus_A MJ0882; hypothetical pr 99.0 2.3E-10 7.8E-15 89.8 5.0 134 70-207 52-193 (194)
46 3mgg_A Methyltransferase; NYSG 99.0 3.8E-11 1.3E-15 101.3 0.5 100 70-172 37-142 (276)
47 3jwh_A HEN1; methyltransferase 99.0 9.2E-11 3.1E-15 95.8 2.8 100 71-175 30-144 (217)
48 2p35_A Trans-aconitate 2-methy 99.0 3.5E-10 1.2E-14 93.8 6.3 103 61-173 26-133 (259)
49 3cc8_A Putative methyltransfer 99.0 1.8E-10 6.3E-15 92.9 4.4 98 69-173 31-131 (230)
50 3l8d_A Methyltransferase; stru 99.0 6.7E-11 2.3E-15 97.2 1.7 115 71-192 54-195 (242)
51 2gs9_A Hypothetical protein TT 99.0 6.1E-10 2.1E-14 90.1 6.8 96 70-173 36-133 (211)
52 1pjz_A Thiopurine S-methyltran 99.0 1.1E-10 3.7E-15 96.1 2.3 125 60-192 14-171 (203)
53 2yqz_A Hypothetical protein TT 99.0 3.5E-10 1.2E-14 93.8 5.1 93 70-171 39-140 (263)
54 3dou_A Ribosomal RNA large sub 99.0 2.3E-10 7.7E-15 94.5 3.6 128 71-208 26-181 (191)
55 3eey_A Putative rRNA methylase 99.0 2.6E-10 8.9E-15 91.6 3.9 137 72-208 24-188 (197)
56 3ccf_A Cyclopropane-fatty-acyl 99.0 5.6E-10 1.9E-14 94.9 6.1 95 69-172 56-154 (279)
57 3ege_A Putative methyltransfer 99.0 2.2E-10 7.5E-15 96.9 3.3 95 70-172 34-130 (261)
58 3e23_A Uncharacterized protein 99.0 2.6E-10 8.9E-15 92.5 3.6 115 71-192 44-177 (211)
59 3thr_A Glycine N-methyltransfe 99.0 1.5E-10 5.3E-15 98.3 2.3 99 71-174 58-177 (293)
60 3g5t_A Trans-aconitate 3-methy 99.0 3.6E-10 1.2E-14 97.2 4.5 93 70-170 36-147 (299)
61 3g5l_A Putative S-adenosylmeth 99.0 4.3E-10 1.5E-14 93.6 4.8 97 70-173 44-146 (253)
62 2i62_A Nicotinamide N-methyltr 99.0 2E-10 7E-15 95.3 2.8 120 69-192 55-234 (265)
63 1xdz_A Methyltransferase GIDB; 99.0 1.5E-09 5.1E-14 90.9 8.1 135 71-212 71-223 (240)
64 3i53_A O-methyltransferase; CO 99.0 5.1E-10 1.8E-14 98.0 5.4 139 66-207 165-331 (332)
65 3dtn_A Putative methyltransfer 98.9 7E-11 2.4E-15 97.1 -0.5 98 70-172 44-148 (234)
66 3cgg_A SAM-dependent methyltra 98.9 2.1E-09 7.1E-14 84.4 8.0 130 71-208 47-195 (195)
67 2ex4_A Adrenal gland protein A 98.9 4.8E-10 1.7E-14 93.1 4.4 119 70-193 79-221 (241)
68 2vdw_A Vaccinia virus capping 98.9 2.2E-10 7.5E-15 101.2 1.9 104 71-174 49-171 (302)
69 2yxd_A Probable cobalt-precorr 98.9 1.6E-09 5.4E-14 84.5 6.5 112 71-194 36-154 (183)
70 3hp7_A Hemolysin, putative; st 98.9 4.7E-09 1.6E-13 93.9 10.4 134 61-207 77-249 (291)
71 2plw_A Ribosomal RNA methyltra 98.9 1.2E-09 4.1E-14 87.8 5.9 126 72-207 24-195 (201)
72 3bkw_A MLL3908 protein, S-aden 98.9 8.5E-10 2.9E-14 90.4 5.0 97 70-173 43-145 (243)
73 2a14_A Indolethylamine N-methy 98.9 1.8E-09 6.2E-14 91.9 7.0 123 70-192 55-233 (263)
74 2ip2_A Probable phenazine-spec 98.9 5.5E-09 1.9E-13 91.1 10.2 134 68-207 166-333 (334)
75 1jsx_A Glucose-inhibited divis 98.9 5E-10 1.7E-14 90.4 3.1 127 72-208 67-205 (207)
76 1vlm_A SAM-dependent methyltra 98.9 1.2E-09 4.2E-14 89.6 5.4 112 71-192 48-183 (219)
77 3evz_A Methyltransferase; NYSG 98.9 1.7E-09 5.7E-14 88.8 6.1 137 71-207 56-219 (230)
78 2avn_A Ubiquinone/menaquinone 98.9 9.3E-10 3.2E-14 92.8 4.4 98 70-174 54-154 (260)
79 3mcz_A O-methyltransferase; ad 98.9 1.3E-09 4.5E-14 95.7 5.6 139 67-208 175-349 (352)
80 2nxc_A L11 mtase, ribosomal pr 98.9 1.1E-09 3.8E-14 93.5 5.0 127 72-207 122-254 (254)
81 2pxx_A Uncharacterized protein 98.9 5.4E-10 1.8E-14 89.5 2.7 130 71-207 43-197 (215)
82 1ri5_A MRNA capping enzyme; me 98.9 2E-10 6.9E-15 96.9 0.1 104 71-174 65-176 (298)
83 2kw5_A SLR1183 protein; struct 98.9 6.6E-10 2.3E-14 89.3 3.1 110 73-192 32-166 (202)
84 4fsd_A Arsenic methyltransfera 98.9 5.8E-10 2E-14 100.6 3.0 115 70-191 83-245 (383)
85 1l3i_A Precorrin-6Y methyltran 98.9 9.9E-10 3.4E-14 86.0 3.9 115 71-192 34-155 (192)
86 3m70_A Tellurite resistance pr 98.9 3.7E-10 1.3E-14 96.1 1.5 118 70-193 120-256 (286)
87 1wzn_A SAM-dependent methyltra 98.9 1.1E-09 3.6E-14 91.0 4.2 101 71-173 42-146 (252)
88 1qzz_A RDMB, aclacinomycin-10- 98.9 1.9E-09 6.5E-14 95.2 5.9 141 67-209 179-357 (374)
89 3dp7_A SAM-dependent methyltra 98.9 3.8E-10 1.3E-14 100.9 1.3 102 69-172 178-287 (363)
90 1ej0_A FTSJ; methyltransferase 98.9 3E-09 1E-13 81.5 6.3 127 72-208 24-178 (180)
91 1zx0_A Guanidinoacetate N-meth 98.9 6.5E-10 2.2E-14 92.5 2.5 100 71-174 61-172 (236)
92 3g89_A Ribosomal RNA small sub 98.9 5.1E-09 1.8E-13 89.8 8.1 137 69-212 79-233 (249)
93 2b3t_A Protein methyltransfera 98.9 1.8E-09 6.1E-14 92.4 5.2 135 71-207 110-275 (276)
94 2oxt_A Nucleoside-2'-O-methylt 98.9 1.4E-09 4.9E-14 94.9 4.6 134 71-207 75-227 (265)
95 3tfw_A Putative O-methyltransf 98.9 3.5E-09 1.2E-13 89.8 6.8 132 71-208 64-225 (248)
96 1yzh_A TRNA (guanine-N(7)-)-me 98.9 1.6E-09 5.4E-14 88.9 4.5 122 71-192 42-177 (214)
97 2aot_A HMT, histamine N-methyl 98.8 7.5E-10 2.6E-14 95.3 2.6 95 70-171 52-171 (292)
98 1nt2_A Fibrillarin-like PRE-rR 98.8 2.6E-09 8.9E-14 89.1 5.6 101 64-171 53-160 (210)
99 1x19_A CRTF-related protein; m 98.8 2.9E-09 1E-13 94.3 6.2 103 68-172 188-295 (359)
100 3opn_A Putative hemolysin; str 98.8 6.5E-09 2.2E-13 88.7 8.0 123 71-208 38-202 (232)
101 3d2l_A SAM-dependent methyltra 98.8 7.2E-10 2.5E-14 90.9 1.9 93 72-171 35-136 (243)
102 3lst_A CALO1 methyltransferase 98.8 9.4E-10 3.2E-14 97.5 2.7 99 66-172 180-286 (348)
103 2fca_A TRNA (guanine-N(7)-)-me 98.8 9.6E-10 3.3E-14 91.3 2.5 120 71-191 39-173 (213)
104 2p8j_A S-adenosylmethionine-de 98.8 4.6E-10 1.6E-14 90.2 0.5 101 71-173 24-129 (209)
105 3bgv_A MRNA CAP guanine-N7 met 98.8 1.8E-09 6.2E-14 93.5 4.1 112 60-175 24-158 (313)
106 3duw_A OMT, O-methyltransferas 98.8 1.9E-09 6.6E-14 88.3 4.0 132 71-208 59-222 (223)
107 1ve3_A Hypothetical protein PH 98.8 3E-09 1E-13 86.3 5.0 97 71-174 39-144 (227)
108 3gwz_A MMCR; methyltransferase 98.8 4.3E-09 1.5E-13 94.2 6.3 137 66-207 198-368 (369)
109 3dxy_A TRNA (guanine-N(7)-)-me 98.8 1E-09 3.4E-14 92.3 2.0 117 70-186 34-165 (218)
110 2r3s_A Uncharacterized protein 98.8 4.6E-09 1.6E-13 91.0 6.2 138 69-208 164-335 (335)
111 3njr_A Precorrin-6Y methylase; 98.8 2.7E-09 9.3E-14 88.1 4.5 121 62-192 49-175 (204)
112 3g07_A 7SK snRNA methylphospha 98.8 1.3E-09 4.4E-14 94.6 2.5 44 129-172 174-220 (292)
113 1tw3_A COMT, carminomycin 4-O- 98.8 4.7E-09 1.6E-13 92.4 6.0 136 68-208 181-356 (360)
114 3lpm_A Putative methyltransfer 98.8 5.5E-09 1.9E-13 88.6 6.1 122 71-192 50-196 (259)
115 3r3h_A O-methyltransferase, SA 98.8 9.2E-09 3.1E-13 87.5 7.1 130 71-208 61-220 (242)
116 3ntv_A MW1564 protein; rossman 98.8 5.1E-09 1.7E-13 87.6 5.3 95 71-171 72-175 (232)
117 3q7e_A Protein arginine N-meth 98.8 2E-09 6.9E-14 96.4 2.9 100 71-171 67-172 (349)
118 3bkx_A SAM-dependent methyltra 98.8 1.4E-08 4.6E-13 85.3 7.8 104 63-172 38-159 (275)
119 3tr6_A O-methyltransferase; ce 98.8 2.5E-09 8.5E-14 87.5 3.1 130 71-208 65-224 (225)
120 3u81_A Catechol O-methyltransf 98.8 1.1E-09 3.8E-14 90.4 0.9 134 71-208 59-213 (221)
121 2gb4_A Thiopurine S-methyltran 98.8 4.4E-09 1.5E-13 90.6 4.3 116 71-192 69-222 (252)
122 3m33_A Uncharacterized protein 98.7 4.4E-09 1.5E-13 87.1 3.8 108 71-191 49-161 (226)
123 2nyu_A Putative ribosomal RNA 98.7 3.2E-09 1.1E-13 84.7 2.9 129 71-207 23-186 (196)
124 3iv6_A Putative Zn-dependent a 98.7 8E-09 2.7E-13 90.6 5.7 103 62-172 39-148 (261)
125 2g72_A Phenylethanolamine N-me 98.7 1.3E-09 4.3E-14 93.3 0.4 64 129-192 170-251 (289)
126 3r0q_C Probable protein argini 98.7 4.3E-09 1.5E-13 95.3 3.8 101 70-171 63-168 (376)
127 2p41_A Type II methyltransfera 98.7 8.2E-09 2.8E-13 91.7 5.3 100 71-171 83-190 (305)
128 3ggd_A SAM-dependent methyltra 98.7 3.9E-09 1.3E-13 87.4 2.5 99 70-173 56-164 (245)
129 3fpf_A Mtnas, putative unchara 98.7 1.9E-09 6.6E-14 97.0 0.7 130 70-208 122-264 (298)
130 2wa2_A Non-structural protein 98.7 7.5E-09 2.6E-13 90.9 4.3 100 71-171 83-192 (276)
131 2frn_A Hypothetical protein PH 98.7 4E-09 1.4E-13 91.4 2.2 116 71-193 126-253 (278)
132 4df3_A Fibrillarin-like rRNA/T 98.7 1.5E-09 5.3E-14 94.2 -0.7 101 63-171 72-181 (233)
133 2bm8_A Cephalosporin hydroxyla 98.7 2.7E-08 9.3E-13 84.3 7.0 111 72-191 83-213 (236)
134 3p2e_A 16S rRNA methylase; met 98.7 5.4E-09 1.8E-13 88.2 2.0 99 71-170 25-137 (225)
135 3q87_B N6 adenine specific DNA 98.7 1E-07 3.5E-12 76.2 9.4 126 72-207 25-161 (170)
136 3c3p_A Methyltransferase; NP_9 98.7 5.5E-09 1.9E-13 85.2 2.0 95 71-172 57-160 (210)
137 3id6_C Fibrillarin-like rRNA/T 98.7 1.3E-08 4.5E-13 87.9 4.3 133 71-209 77-232 (232)
138 3dr5_A Putative O-methyltransf 98.7 1.9E-08 6.6E-13 84.6 5.2 132 72-209 58-214 (221)
139 4dcm_A Ribosomal RNA large sub 98.6 2E-08 6.7E-13 91.5 5.4 114 72-185 224-349 (375)
140 3ckk_A TRNA (guanine-N(7)-)-me 98.6 2.7E-08 9.2E-13 84.6 5.9 112 70-187 46-184 (235)
141 1g8a_A Fibrillarin-like PRE-rR 98.6 1.9E-08 6.7E-13 82.7 4.5 139 61-208 66-227 (227)
142 2pjd_A Ribosomal RNA small sub 98.6 6.6E-09 2.3E-13 92.3 1.8 131 72-207 198-336 (343)
143 2esr_A Methyltransferase; stru 98.6 1.8E-09 6E-14 85.3 -1.9 100 71-174 32-140 (177)
144 3p9n_A Possible methyltransfer 98.6 4.4E-09 1.5E-13 84.4 0.1 125 45-174 22-155 (189)
145 2fyt_A Protein arginine N-meth 98.6 2.4E-08 8.3E-13 89.2 4.7 97 71-169 65-168 (340)
146 3mb5_A SAM-dependent methyltra 98.6 1.8E-08 6.1E-13 84.1 3.0 107 71-188 94-211 (255)
147 1g6q_1 HnRNP arginine N-methyl 98.6 1.6E-08 5.5E-13 89.6 2.7 98 71-170 39-143 (328)
148 2ipx_A RRNA 2'-O-methyltransfe 98.6 6.9E-09 2.4E-13 86.1 0.3 97 71-172 78-182 (233)
149 2qe6_A Uncharacterized protein 98.6 1.3E-08 4.5E-13 88.4 2.0 101 69-174 76-198 (274)
150 2y1w_A Histone-arginine methyl 98.6 2.9E-08 1E-12 88.6 4.2 99 71-171 51-154 (348)
151 2ozv_A Hypothetical protein AT 98.6 6.3E-08 2.2E-12 82.9 5.7 118 70-191 36-188 (260)
152 2avd_A Catechol-O-methyltransf 98.6 2.1E-08 7.3E-13 82.1 2.6 130 71-208 70-229 (229)
153 3gdh_A Trimethylguanosine synt 98.6 7.7E-10 2.6E-14 91.7 -6.2 97 71-172 79-181 (241)
154 3lbf_A Protein-L-isoaspartate 98.6 1E-08 3.5E-13 83.0 0.6 96 62-174 71-176 (210)
155 1vbf_A 231AA long hypothetical 98.5 3.3E-08 1.1E-12 81.1 3.5 97 62-174 64-167 (231)
156 2ift_A Putative methylase HI07 98.5 8.3E-09 2.9E-13 84.7 -0.1 127 72-207 55-193 (201)
157 2vdv_E TRNA (guanine-N(7)-)-me 98.5 3.2E-08 1.1E-12 83.2 3.5 113 70-188 49-190 (246)
158 3cbg_A O-methyltransferase; cy 98.5 3.1E-08 1.1E-12 83.0 3.3 130 71-208 73-232 (232)
159 2fhp_A Methylase, putative; al 98.5 9E-09 3.1E-13 81.1 -0.0 100 71-174 45-156 (187)
160 3dmg_A Probable ribosomal RNA 98.5 2.4E-08 8.1E-13 91.4 2.4 150 47-207 214-372 (381)
161 1ws6_A Methyltransferase; stru 98.5 4.6E-09 1.6E-13 81.4 -2.2 99 71-174 42-149 (171)
162 3mq2_A 16S rRNA methyltransfer 98.5 1.1E-08 3.8E-13 83.4 -0.0 118 71-192 28-179 (218)
163 1fp1_D Isoliquiritigenin 2'-O- 98.5 2.1E-08 7.3E-13 89.5 1.6 95 68-172 207-306 (372)
164 2gpy_A O-methyltransferase; st 98.5 1.7E-08 5.9E-13 83.5 0.9 92 71-172 55-160 (233)
165 3reo_A (ISO)eugenol O-methyltr 98.5 7.4E-08 2.5E-12 86.5 5.1 95 68-172 201-300 (368)
166 3sso_A Methyltransferase; macr 98.5 7.8E-09 2.7E-13 97.2 -1.4 110 71-191 217-361 (419)
167 2pwy_A TRNA (adenine-N(1)-)-me 98.5 4.8E-08 1.6E-12 81.0 3.2 107 71-191 97-218 (258)
168 1p91_A Ribosomal RNA large sub 98.5 3.1E-08 1.1E-12 83.3 1.6 90 70-174 85-180 (269)
169 1nv8_A HEMK protein; class I a 98.5 5.3E-08 1.8E-12 85.1 3.0 131 72-208 125-282 (284)
170 2yxe_A Protein-L-isoaspartate 98.5 4.3E-08 1.5E-12 79.6 2.2 99 62-174 71-179 (215)
171 1yb2_A Hypothetical protein TA 98.5 4.5E-08 1.5E-12 83.8 2.3 107 70-191 110-231 (275)
172 1i1n_A Protein-L-isoaspartate 98.5 1E-08 3.5E-13 84.1 -1.7 93 71-173 78-183 (226)
173 3p9c_A Caffeic acid O-methyltr 98.5 1.1E-07 3.8E-12 85.4 4.9 95 68-172 199-298 (364)
174 2hnk_A SAM-dependent O-methylt 98.4 9.4E-08 3.2E-12 79.7 3.9 131 71-209 61-232 (239)
175 1fp2_A Isoflavone O-methyltran 98.4 7.8E-08 2.7E-12 85.0 3.5 95 69-172 187-288 (352)
176 1o9g_A RRNA methyltransferase; 98.4 2.6E-08 8.9E-13 83.6 0.1 45 131-175 167-217 (250)
177 1dl5_A Protein-L-isoaspartate 98.4 5.2E-08 1.8E-12 85.5 1.9 101 61-173 68-176 (317)
178 2ld4_A Anamorsin; methyltransf 98.4 1.7E-07 5.9E-12 74.1 4.5 82 130-215 61-175 (176)
179 3c3y_A Pfomt, O-methyltransfer 98.4 1.3E-07 4.6E-12 79.6 3.9 97 70-172 70-181 (237)
180 4a6d_A Hydroxyindole O-methylt 98.4 1.8E-07 6.2E-12 83.6 4.8 134 66-209 175-347 (353)
181 1o54_A SAM-dependent O-methylt 98.4 1.5E-07 5E-12 80.3 3.7 106 71-191 113-233 (277)
182 1sui_A Caffeoyl-COA O-methyltr 98.4 6.8E-08 2.3E-12 82.4 1.4 97 70-172 79-190 (247)
183 1jg1_A PIMT;, protein-L-isoasp 98.4 8.9E-08 3E-12 79.6 1.7 100 62-173 85-190 (235)
184 1fbn_A MJ fibrillarin homologu 98.4 2.4E-07 8.1E-12 77.0 4.2 128 71-208 75-228 (230)
185 2fpo_A Methylase YHHF; structu 98.4 5.3E-08 1.8E-12 79.9 0.1 128 72-207 56-191 (202)
186 3bwc_A Spermidine synthase; SA 98.4 4.7E-07 1.6E-11 79.7 6.1 134 71-208 96-258 (304)
187 1ixk_A Methyltransferase; open 98.3 1.8E-07 6E-12 82.8 3.3 120 71-190 119-268 (315)
188 2yvl_A TRMI protein, hypotheti 98.3 3.8E-07 1.3E-11 75.2 4.9 105 71-187 92-206 (248)
189 3htx_A HEN1; HEN1, small RNA m 98.3 3.7E-07 1.3E-11 92.7 5.8 97 71-173 722-835 (950)
190 1r18_A Protein-L-isoaspartate( 98.3 2.7E-08 9.3E-13 82.2 -2.4 90 71-172 85-194 (227)
191 2pbf_A Protein-L-isoaspartate 98.3 2.2E-08 7.6E-13 82.1 -3.0 93 72-173 82-194 (227)
192 1mjf_A Spermidine synthase; sp 98.3 6.6E-07 2.3E-11 77.7 6.2 132 71-208 76-239 (281)
193 1i9g_A Hypothetical protein RV 98.3 3.3E-07 1.1E-11 77.4 3.5 106 71-190 100-223 (280)
194 1zg3_A Isoflavanone 4'-O-methy 98.3 1.7E-07 5.8E-12 83.1 1.8 94 70-172 193-293 (358)
195 3a27_A TYW2, uncharacterized p 98.3 2.3E-07 8E-12 80.1 2.6 113 71-191 120-245 (272)
196 3adn_A Spermidine synthase; am 98.3 3E-06 1E-10 74.9 9.7 136 69-209 82-246 (294)
197 3b3j_A Histone-arginine methyl 98.3 2.8E-07 9.6E-12 86.8 3.2 100 70-171 158-262 (480)
198 2b25_A Hypothetical protein; s 98.3 1.3E-07 4.4E-12 83.2 0.5 95 71-173 106-220 (336)
199 2xyq_A Putative 2'-O-methyl tr 98.2 4E-06 1.4E-10 74.6 9.6 130 64-207 59-210 (290)
200 1u2z_A Histone-lysine N-methyl 98.2 4.4E-07 1.5E-11 85.1 3.4 106 60-173 234-360 (433)
201 1inl_A Spermidine synthase; be 98.2 2E-06 6.7E-11 75.5 7.2 134 71-209 91-253 (296)
202 1uir_A Polyamine aminopropyltr 98.2 1.4E-06 4.7E-11 77.1 6.0 134 71-209 78-243 (314)
203 1iy9_A Spermidine synthase; ro 98.2 2.6E-06 8.9E-11 74.0 7.6 135 70-209 75-237 (275)
204 3ajd_A Putative methyltransfer 98.2 1.5E-07 5.2E-12 81.1 -0.6 116 71-186 84-229 (274)
205 1wy7_A Hypothetical protein PH 98.2 1.4E-06 4.8E-11 70.2 5.0 116 71-192 50-170 (207)
206 2h00_A Methyltransferase 10 do 98.2 4.1E-08 1.4E-12 82.2 -4.2 102 70-171 65-191 (254)
207 3bzb_A Uncharacterized protein 98.2 2.1E-07 7.2E-12 80.5 -0.1 118 71-192 80-232 (281)
208 4dmg_A Putative uncharacterize 98.2 5.6E-07 1.9E-11 82.8 2.7 122 71-192 215-352 (393)
209 3tma_A Methyltransferase; thum 98.2 1.3E-06 4.4E-11 77.6 4.6 122 68-192 201-334 (354)
210 4hc4_A Protein arginine N-meth 98.2 9.5E-07 3.2E-11 81.4 3.8 100 71-171 84-188 (376)
211 2pt6_A Spermidine synthase; tr 98.1 3.1E-06 1E-10 75.4 6.7 134 71-209 117-278 (321)
212 2igt_A SAM dependent methyltra 98.1 6.5E-07 2.2E-11 80.3 2.2 122 71-192 154-299 (332)
213 2b2c_A Spermidine synthase; be 98.1 2.4E-06 8.3E-11 76.2 5.6 133 71-208 109-269 (314)
214 3fzg_A 16S rRNA methylase; met 98.1 4.6E-07 1.6E-11 77.8 0.5 131 71-207 50-197 (200)
215 3evf_A RNA-directed RNA polyme 98.1 1.9E-06 6.6E-11 77.2 3.6 132 72-207 76-226 (277)
216 1xj5_A Spermidine synthase 1; 98.1 1.4E-06 4.8E-11 78.4 2.7 97 70-171 120-234 (334)
217 3uwp_A Histone-lysine N-methyl 98.1 2.8E-06 9.6E-11 80.3 4.8 141 37-190 146-312 (438)
218 3gjy_A Spermidine synthase; AP 98.0 5.4E-06 1.8E-10 75.0 6.2 134 71-210 90-249 (317)
219 2o07_A Spermidine synthase; st 98.0 2.2E-06 7.6E-11 75.8 3.6 134 70-208 95-256 (304)
220 1af7_A Chemotaxis receptor met 98.0 1.9E-06 6.6E-11 75.8 3.0 41 131-172 212-252 (274)
221 1ne2_A Hypothetical protein TA 98.0 5.6E-06 1.9E-10 66.6 5.4 107 71-188 52-162 (200)
222 2cmg_A Spermidine synthase; tr 98.0 1.7E-05 5.9E-10 68.8 8.8 128 71-209 73-217 (262)
223 2i7c_A Spermidine synthase; tr 98.0 3.4E-06 1.2E-10 73.4 4.0 133 71-208 79-239 (283)
224 3kr9_A SAM-dependent methyltra 98.0 3.9E-06 1.3E-10 72.4 4.0 128 72-207 17-157 (225)
225 1wxx_A TT1595, hypothetical pr 98.0 1.9E-06 6.6E-11 77.7 2.1 123 70-192 209-351 (382)
226 2qm3_A Predicted methyltransfe 97.9 3E-06 1E-10 76.2 2.7 116 71-191 173-303 (373)
227 1sqg_A SUN protein, FMU protei 97.9 6.4E-06 2.2E-10 75.5 4.9 110 71-186 247-392 (429)
228 3c0k_A UPF0064 protein YCCW; P 97.9 2.4E-06 8.4E-11 77.3 1.9 121 71-191 221-364 (396)
229 2yx1_A Hypothetical protein MJ 97.9 2.3E-06 7.8E-11 76.2 1.4 94 71-172 196-291 (336)
230 2yxl_A PH0851 protein, 450AA l 97.9 4E-06 1.4E-10 77.6 2.8 120 64-190 255-412 (450)
231 2as0_A Hypothetical protein PH 97.9 3.6E-06 1.2E-10 76.0 2.1 122 71-192 218-361 (396)
232 2frx_A Hypothetical protein YE 97.9 2.5E-06 8.5E-11 80.5 1.0 101 70-171 117-245 (479)
233 3giw_A Protein of unknown func 97.9 1.5E-05 5E-10 71.1 5.7 100 69-171 77-199 (277)
234 3m6w_A RRNA methylase; rRNA me 97.8 2.9E-06 1E-10 80.1 0.2 117 71-187 102-248 (464)
235 2b78_A Hypothetical protein SM 97.8 5.7E-06 1.9E-10 75.2 1.3 119 72-190 214-355 (385)
236 3m4x_A NOL1/NOP2/SUN family pr 97.7 3.7E-06 1.3E-10 79.2 -0.4 120 71-190 106-256 (456)
237 2f8l_A Hypothetical protein LM 97.7 2.3E-05 8E-10 69.3 4.7 139 68-208 128-305 (344)
238 3lec_A NADB-rossmann superfami 97.7 3.9E-05 1.3E-09 66.5 6.0 131 72-208 23-164 (230)
239 2ih2_A Modification methylase 97.7 7.8E-05 2.7E-09 66.5 7.7 108 72-189 41-186 (421)
240 3gnl_A Uncharacterized protein 97.7 4.1E-05 1.4E-09 66.9 5.5 131 72-208 23-164 (244)
241 3k6r_A Putative transferase PH 97.7 1.6E-05 5.6E-10 70.3 2.7 134 44-193 107-253 (278)
242 1zq9_A Probable dimethyladenos 97.6 3.5E-06 1.2E-10 73.4 -1.8 100 71-170 29-145 (285)
243 3tm4_A TRNA (guanine N2-)-meth 97.6 2.8E-05 9.4E-10 70.2 3.6 121 68-192 215-347 (373)
244 2jjq_A Uncharacterized RNA met 97.6 3.4E-05 1.2E-09 71.5 3.3 98 71-177 291-392 (425)
245 3v97_A Ribosomal RNA large sub 97.5 9.7E-06 3.3E-10 79.7 -1.1 104 71-174 540-659 (703)
246 1uwv_A 23S rRNA (uracil-5-)-me 97.4 0.0006 2E-08 62.7 9.8 115 71-192 287-409 (433)
247 2h1r_A Dimethyladenosine trans 97.4 4.3E-05 1.5E-09 67.0 1.8 90 71-167 43-154 (299)
248 3b5i_A S-adenosyl-L-methionine 97.4 6.3E-05 2.1E-09 69.3 2.7 43 129-171 146-224 (374)
249 3eld_A Methyltransferase; flav 97.4 0.00011 3.8E-09 66.5 4.2 135 70-207 81-233 (300)
250 3gcz_A Polyprotein; flavivirus 97.3 8.2E-05 2.8E-09 66.8 2.8 133 72-208 92-244 (282)
251 1yub_A Ermam, rRNA methyltrans 97.3 7.2E-06 2.5E-10 69.2 -4.8 32 71-102 30-63 (245)
252 3lcv_B Sisomicin-gentamicin re 97.2 0.0003 1E-08 63.1 4.9 134 69-207 131-281 (281)
253 2okc_A Type I restriction enzy 97.1 0.00063 2.2E-08 62.5 5.9 121 70-192 171-334 (445)
254 3frh_A 16S rRNA methylase; met 97.0 0.00091 3.1E-08 59.2 6.2 135 69-208 104-252 (253)
255 1qam_A ERMC' methyltransferase 97.0 0.00028 9.6E-09 59.9 2.7 28 71-98 31-60 (244)
256 4azs_A Methyltransferase WBDD; 96.9 9.1E-05 3.1E-09 70.4 -1.4 98 72-170 68-171 (569)
257 2dul_A N(2),N(2)-dimethylguano 96.9 8.9E-05 3.1E-09 67.8 -1.7 93 71-171 48-163 (378)
258 2efj_A 3,7-dimethylxanthine me 96.5 0.0011 3.9E-08 61.3 3.0 20 71-90 53-72 (384)
259 2qfm_A Spermine synthase; sper 96.4 0.00059 2E-08 63.0 0.3 24 69-92 187-210 (364)
260 4gqb_A Protein arginine N-meth 96.3 0.0019 6.4E-08 63.5 3.4 125 40-170 322-465 (637)
261 2wk1_A NOVP; transferase, O-me 96.3 0.02 6.8E-07 50.7 9.4 120 69-193 105-268 (282)
262 3axs_A Probable N(2),N(2)-dime 96.2 0.00059 2E-08 63.1 -1.0 93 71-171 53-157 (392)
263 3bt7_A TRNA (uracil-5-)-methyl 96.0 0.0036 1.2E-07 56.1 3.4 30 72-101 215-246 (369)
264 3cvo_A Methyltransferase-like 96.0 0.002 6.7E-08 54.7 1.4 107 71-185 31-169 (202)
265 1m6e_X S-adenosyl-L-methionnin 95.7 0.0046 1.6E-07 56.7 2.9 96 69-171 50-208 (359)
266 2b9e_A NOL1/NOP2/SUN domain fa 95.4 0.011 3.7E-07 52.5 3.9 115 71-187 103-253 (309)
267 3ldu_A Putative methylase; str 95.3 0.0033 1.1E-07 57.3 0.3 109 68-176 193-349 (385)
268 3k0b_A Predicted N6-adenine-sp 95.1 0.0048 1.7E-07 56.5 0.7 108 68-175 199-354 (393)
269 3ua3_A Protein arginine N-meth 94.8 0.014 4.7E-07 58.5 3.1 129 40-170 377-532 (745)
270 4auk_A Ribosomal RNA large sub 94.7 0.27 9.3E-06 45.5 11.4 128 71-211 212-357 (375)
271 3ldg_A Putative uncharacterize 94.7 0.013 4.5E-07 53.5 2.6 108 68-175 192-347 (384)
272 3r24_A NSP16, 2'-O-methyl tran 94.7 0.042 1.4E-06 50.4 5.8 134 60-207 99-256 (344)
273 2r6z_A UPF0341 protein in RSP 94.3 0.0017 5.8E-08 56.1 -4.1 74 71-144 84-173 (258)
274 3fut_A Dimethyladenosine trans 94.0 0.038 1.3E-06 48.3 3.8 36 63-101 42-79 (271)
275 2ar0_A M.ecoki, type I restric 94.0 0.0084 2.9E-07 57.1 -0.5 132 71-208 170-362 (541)
276 3gru_A Dimethyladenosine trans 94.0 0.019 6.3E-07 50.9 1.8 70 64-142 46-124 (295)
277 2qy6_A UPF0209 protein YFCK; s 93.5 0.033 1.1E-06 48.3 2.5 86 119-208 156-247 (257)
278 3ftd_A Dimethyladenosine trans 93.3 0.053 1.8E-06 46.3 3.5 39 71-113 32-73 (249)
279 2px2_A Genome polyprotein [con 93.2 0.085 2.9E-06 47.0 4.6 128 71-207 74-225 (269)
280 3o4f_A Spermidine synthase; am 92.8 0.21 7E-06 44.7 6.7 138 68-208 81-245 (294)
281 3ll7_A Putative methyltransfer 92.7 0.021 7.1E-07 53.2 0.0 132 71-207 94-246 (410)
282 3tqs_A Ribosomal RNA small sub 92.6 0.052 1.8E-06 46.8 2.5 31 71-101 30-62 (255)
283 3uzu_A Ribosomal RNA small sub 92.3 0.062 2.1E-06 47.0 2.5 39 71-113 43-87 (279)
284 2oyr_A UPF0341 protein YHIQ; a 91.9 0.022 7.4E-07 49.6 -0.8 101 62-166 80-194 (258)
285 3s1s_A Restriction endonucleas 90.5 0.2 6.9E-06 51.0 4.4 56 153-208 446-517 (878)
286 2k4m_A TR8_protein, UPF0146 pr 90.3 0.18 6.1E-06 41.6 3.2 51 47-102 17-71 (153)
287 1m6y_A S-adenosyl-methyltransf 89.8 0.13 4.4E-06 45.5 2.1 36 63-100 21-60 (301)
288 4fzv_A Putative methyltransfer 87.6 0.12 4E-06 47.2 0.3 102 68-171 146-283 (359)
289 1qyr_A KSGA, high level kasuga 87.4 0.28 9.6E-06 42.0 2.5 29 72-101 23-54 (252)
290 3v97_A Ribosomal RNA large sub 86.5 0.24 8.1E-06 48.6 1.8 41 132-172 303-347 (703)
291 3p8z_A Mtase, non-structural p 86.5 2.6 9E-05 37.4 8.3 112 66-183 76-201 (267)
292 2zig_A TTHA0409, putative modi 86.4 0.51 1.8E-05 40.7 3.7 21 151-171 76-96 (297)
293 3lkz_A Non-structural protein 85.9 3.1 0.00011 37.9 8.6 112 66-183 92-219 (321)
294 3khk_A Type I restriction-modi 84.2 0.26 8.8E-06 47.0 0.8 16 73-88 247-262 (544)
295 4dcm_A Ribosomal RNA large sub 84.0 1.1 3.8E-05 40.3 4.8 97 72-173 40-137 (375)
296 1boo_A Protein (N-4 cytosine-s 83.5 0.93 3.2E-05 39.8 4.0 43 149-191 61-114 (323)
297 3lkd_A Type I restriction-modi 81.3 0.44 1.5E-05 45.5 1.1 117 70-192 221-385 (542)
298 3c6k_A Spermine synthase; sper 78.1 0.41 1.4E-05 44.4 -0.2 137 70-209 205-379 (381)
299 1g60_A Adenine-specific methyl 77.1 3.9 0.00013 34.4 5.7 58 150-208 52-125 (260)
300 2vz8_A Fatty acid synthase; tr 76.4 0.89 3E-05 50.7 1.8 42 129-173 1308-1349(2512)
301 3dmg_A Probable ribosomal RNA 75.9 4.5 0.00015 36.5 6.1 106 72-189 47-158 (381)
302 1g55_A DNA cytosine methyltran 70.4 7.8 0.00027 34.3 6.2 117 73-192 4-144 (343)
303 2zig_A TTHA0409, putative modi 66.7 3.1 0.00011 35.7 2.7 30 71-100 236-267 (297)
304 1wg8_A Predicted S-adenosylmet 62.1 4.7 0.00016 35.9 3.0 37 62-100 16-54 (285)
305 3trk_A Nonstructural polyprote 58.0 19 0.00065 32.6 6.2 76 131-207 210-301 (324)
306 3qv2_A 5-cytosine DNA methyltr 57.9 61 0.0021 28.6 9.5 133 72-210 11-182 (327)
307 1eg2_A Modification methylase 53.7 10 0.00035 33.4 3.7 21 151-171 85-105 (319)
308 3goh_A Alcohol dehydrogenase, 45.9 27 0.00091 29.5 5.0 87 65-171 139-228 (315)
309 1i4w_A Mitochondrial replicati 42.1 13 0.00043 33.7 2.5 47 45-96 34-88 (353)
310 4gua_A Non-structural polyprot 39.7 41 0.0014 33.2 5.7 115 92-207 179-311 (670)
311 1jdq_A TM006 protein, hypothet 38.3 1.2E+02 0.004 22.3 7.8 60 147-207 34-97 (98)
312 3tos_A CALS11; methyltransfera 38.2 9.7 0.00033 33.1 1.0 55 131-190 181-240 (257)
313 2hwk_A Helicase NSP2; rossman 33.8 47 0.0016 30.2 4.7 54 154-207 236-296 (320)
314 3ubt_Y Modification methylase 33.7 2.1E+02 0.0073 24.0 10.5 130 73-207 2-162 (331)
315 1g60_A Adenine-specific methyl 33.0 24 0.00081 29.5 2.6 27 72-98 214-242 (260)
316 3two_A Mannitol dehydrogenase; 32.1 43 0.0015 28.7 4.2 90 65-171 173-264 (348)
317 2c7p_A Modification methylase 31.4 31 0.0011 30.4 3.2 116 72-192 12-148 (327)
318 3iht_A S-adenosyl-L-methionine 31.3 19 0.00063 30.1 1.6 28 71-98 41-72 (174)
319 2km1_A Protein DRE2; yeast, an 30.3 30 0.001 27.6 2.6 53 129-187 55-110 (136)
320 1f8f_A Benzyl alcohol dehydrog 29.5 27 0.00093 30.3 2.5 92 65-171 187-288 (371)
321 1pl8_A Human sorbitol dehydrog 28.9 38 0.0013 29.2 3.3 94 65-171 168-272 (356)
322 3gms_A Putative NADPH:quinone 26.4 53 0.0018 28.0 3.7 48 65-116 141-191 (340)
323 1piw_A Hypothetical zinc-type 25.4 33 0.0011 29.7 2.2 93 65-171 176-275 (360)
324 1rjd_A PPM1P, carboxy methyl t 25.0 61 0.0021 28.6 4.0 30 69-98 96-127 (334)
325 3qha_A Putative oxidoreductase 23.7 2E+02 0.0068 24.1 6.8 98 73-185 17-120 (296)
326 2dph_A Formaldehyde dismutase; 22.2 40 0.0014 29.6 2.2 42 72-115 187-231 (398)
327 2pjd_A Ribosomal RNA small sub 22.0 79 0.0027 27.2 4.0 105 72-186 21-127 (343)
328 3elb_A Ethanolamine-phosphate 22.0 15 0.00053 33.1 -0.6 12 129-140 203-214 (341)
329 1mil_A SHC adaptor protein; SH 21.5 46 0.0016 24.0 2.1 20 156-175 17-36 (104)
330 1uuf_A YAHK, zinc-type alcohol 21.2 44 0.0015 29.2 2.2 91 65-171 191-287 (369)
331 1iz0_A Quinone oxidoreductase; 21.1 41 0.0014 28.2 1.9 84 71-171 126-217 (302)
332 1e3j_A NADP(H)-dependent ketos 21.0 61 0.0021 27.8 3.1 94 65-171 165-270 (352)
333 3lvj_C Sulfurtransferase TUSA; 20.7 2.2E+02 0.0075 19.7 8.0 59 148-207 19-80 (82)
No 1
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.27 E-value=3.3e-12 Score=102.53 Aligned_cols=132 Identities=14% Similarity=0.167 Sum_probs=85.1
Q ss_pred EEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCccc---ccccccccCCCCC-cchhhhhhhhhhccc
Q 027471 73 NVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFG---LYHDWCESFNTYP-RTYDLLHADHLFSTI 145 (223)
Q Consensus 73 nvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~---~~~dwce~f~tyP-rtyDllH~~~lfs~~ 145 (223)
+|||+|||.|.++..|.++ .|+.+.++|.......+.+.+.|+.. .++.-.+.++ ++ ++||+|.|..++.+.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~ 124 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-IEDNYADLIVSRGSVFFW 124 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-SCTTCEEEEEEESCGGGC
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-CCcccccEEEECchHhhc
Confidence 8999999999999999886 34555554432222222333335532 2222122233 44 899999999998887
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEeccH------------------------------HHHHHHHHHHHhCCCeeEEee
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILRDDA------------------------------ETIVEVEDLVKSLHWDVRMIY 195 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~D~~------------------------------~~~~~i~~i~~~l~W~~~~~~ 195 (223)
.+ ...+|.|+.|+|||||.+++.+.. ...+.++++++.-.++.....
T Consensus 125 ~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 125 ED---VATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp SC---HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred cC---HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 54 468999999999999999997421 012566777777777654333
Q ss_pred cCCCeeEEEEEec
Q 027471 196 TNDNQGMLCVHKT 208 (223)
Q Consensus 196 ~~~~e~~L~~~K~ 208 (223)
.......+++.|+
T Consensus 202 ~~~~~~~~~~~k~ 214 (219)
T 3dlc_A 202 LGDEGFWIIISKT 214 (219)
T ss_dssp EETTEEEEEEBCC
T ss_pred ecCCceEEEEecc
Confidence 3344455555553
No 2
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.24 E-value=3e-12 Score=104.11 Aligned_cols=135 Identities=15% Similarity=0.099 Sum_probs=91.8
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc--ccccccccCCCCCcchhhhhhhhhhc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
-.+|||+|||.|.++.+|++. .|+.+.+++.......+.+.+.|+.. .+..-.+.++.-+.+||+|.|..++.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 117 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFH 117 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGG
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhh
Confidence 458999999999999998765 46666665543222233333445432 22211122332238999999999998
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEeccH-------------HHHHHHHHHHHhCCCeeEE-eecCCCeeEEEEEec
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRDDA-------------ETIVEVEDLVKSLHWDVRM-IYTNDNQGMLCVHKT 208 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~-------------~~~~~i~~i~~~l~W~~~~-~~~~~~e~~L~~~K~ 208 (223)
+..+ ...+|.|+.|+|||||.+++.+.. ...+.+.++++...++... .+......+++++|+
T Consensus 118 ~~~~---~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~ 193 (219)
T 3dh0_A 118 ELSE---PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYCFGVYAMIV 193 (219)
T ss_dssp GCSS---HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTEEEEEEECC
T ss_pred hcCC---HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCceEEEEEEec
Confidence 8764 368999999999999999998421 1257888899999998653 333456777888875
No 3
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.20 E-value=2e-11 Score=102.58 Aligned_cols=134 Identities=16% Similarity=0.132 Sum_probs=93.6
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCc-ccccccccccCCCCCcchhhhhhhh-hhcccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNTYPRTYDLLHADH-LFSTIK 146 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~tyPrtyDllH~~~-lfs~~~ 146 (223)
-.+|||+|||.|.++..|.+++ |+.+.++|. .++.+.++-- +..+..-.+.++. +.+||+|.|.. +|.+..
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~----~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFGTVEGLELSAD----MLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSSEEEEEESCHH----HHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSC
T ss_pred CCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHH----HHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcC
Confidence 4689999999999999999985 455554332 5555555521 1122211122222 69999999987 888876
Q ss_pred cccchhHHHHhhhhcccCCcEEEEecc-----------------------------------------------------
Q 027471 147 KRCSLKAVVAEVDRILRPDGNLILRDD----------------------------------------------------- 173 (223)
Q Consensus 147 ~rC~i~~vl~E~DRILRPgG~~ii~D~----------------------------------------------------- 173 (223)
+.-....+|.++.|+|||||.+++.+.
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITH 205 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEE
Confidence 545567899999999999999999520
Q ss_pred ------H--HHHHHHHHHHHhCCCeeEEee-cCCCeeEEEEEecc
Q 027471 174 ------A--ETIVEVEDLVKSLHWDVRMIY-TNDNQGMLCVHKTY 209 (223)
Q Consensus 174 ------~--~~~~~i~~i~~~l~W~~~~~~-~~~~e~~L~~~K~~ 209 (223)
. -..++++++++.--+++.... ......+++|+|+-
T Consensus 206 ~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~a 250 (263)
T 3pfg_A 206 HEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPGA 250 (263)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEECC
T ss_pred EEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecCC
Confidence 0 025788899999888876433 33567789999963
No 4
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.20 E-value=1.1e-11 Score=105.45 Aligned_cols=109 Identities=12% Similarity=0.167 Sum_probs=73.2
Q ss_pred hhccCCCCCCceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhh
Q 027471 61 LNGMGINWSFVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLH 137 (223)
Q Consensus 61 ~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH 137 (223)
++.+++.. -.+|||+|||.|+++.+|+++ .|+.+.++|.......+.+.+.|+..-+.--+..+..+|.+||+|.
T Consensus 57 ~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~ 134 (287)
T 1kpg_A 57 LGKLGLQP--GMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIV 134 (287)
T ss_dssp HTTTTCCT--TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEE
T ss_pred HHHcCCCC--cCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEE
Confidence 34454444 358999999999999998843 4566666544222122223333653322222334455679999999
Q ss_pred hhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 138 ADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 138 ~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
|..+|.+..+ .....+|.|+.|+|||||.+++.+
T Consensus 135 ~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 135 SIGAFEHFGH-ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EESCGGGTCT-TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EeCchhhcCh-HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999988853 235689999999999999999974
No 5
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.19 E-value=4.5e-12 Score=105.36 Aligned_cols=106 Identities=8% Similarity=0.075 Sum_probs=72.1
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcc---cccccccccCCCCCcchhh
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLF---GLYHDWCESFNTYPRTYDL 135 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi---~~~~dwce~f~tyPrtyDl 135 (223)
+.+++.. -.+|||+|||.|.++.+|+++ .|+.+.++|.......+.+.+.|+. -.++.-.+.++. +.+||+
T Consensus 30 ~~~~~~~--~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~ 106 (256)
T 1nkv_A 30 RVLRMKP--GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDV 106 (256)
T ss_dssp HHTCCCT--TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEE
T ss_pred HhcCCCC--CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCE
Confidence 3344444 358999999999999988764 5666666554333233334455663 222211122332 689999
Q ss_pred hhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 136 LHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 136 lH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
|.|..++.+..+ ...+|.|+.|+|||||.+++.+.
T Consensus 107 V~~~~~~~~~~~---~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 107 AACVGATWIAGG---FAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp EEEESCGGGTSS---SHHHHHHHTTSEEEEEEEEEEEE
T ss_pred EEECCChHhcCC---HHHHHHHHHHHcCCCeEEEEecC
Confidence 999888877654 46899999999999999999853
No 6
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.17 E-value=9.5e-12 Score=107.21 Aligned_cols=110 Identities=9% Similarity=0.090 Sum_probs=75.1
Q ss_pred hhccCCCCCCceEEEeeCCchHHHHHHhhCC-C--eEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhh
Q 027471 61 LNGMGINWSFVRNVMDMRAVYGGFAAALKDL-K--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLH 137 (223)
Q Consensus 61 ~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~-~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH 137 (223)
++.+++.. -.+|||+|||.|.++..|+++ + |+.+.++|.......+.+.+.|+..-+.-.+..+..++.+||+|.
T Consensus 65 ~~~~~~~~--~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~ 142 (302)
T 3hem_A 65 LDKLNLEP--GMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIV 142 (302)
T ss_dssp HHTTCCCT--TCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEE
T ss_pred HHHcCCCC--cCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEE
Confidence 34444444 468999999999999999876 4 555666544322233334445664322222233333489999999
Q ss_pred hhhhhcccccc------cchhHHHHhhhhcccCCcEEEEec
Q 027471 138 ADHLFSTIKKR------CSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 138 ~~~lfs~~~~r------C~i~~vl~E~DRILRPgG~~ii~D 172 (223)
|..+|.+..+. -....+|.|+.|+|||||.+++.+
T Consensus 143 ~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 143 SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99999888542 345699999999999999999974
No 7
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.17 E-value=4.3e-11 Score=96.49 Aligned_cols=129 Identities=12% Similarity=0.149 Sum_probs=89.6
Q ss_pred eEEEeeCCchHHHHHHhhCCCe--EEEEecCCCCCCChhhHHhhCcccccccccccC---CCCC-cchhhhhhhhhhccc
Q 027471 72 RNVMDMRAVYGGFAAALKDLKV--WVMNVVPIESPDTLPIIYERGLFGLYHDWCESF---NTYP-RTYDLLHADHLFSTI 145 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~V--~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f---~tyP-rtyDllH~~~lfs~~ 145 (223)
.+|||+|||.|.++.+|.+++. +.+.+++ ..++.+.+++.+.....-.+.+ +..+ .+||+|.|..++. .
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~ 128 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGIEAVGVDGDR----TLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H 128 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTCEEEEEESCH----HHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S
T ss_pred CEEEEeCCCCCHHHHHHHHCCCEEEEEcCCH----HHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-h
Confidence 7899999999999999998864 4444433 3667777775544333222233 3344 5699999998887 3
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEeccHH--------------------------------HHHHHHHHHHhCCCeeEE
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILRDDAE--------------------------------TIVEVEDLVKSLHWDVRM 193 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~D~~~--------------------------------~~~~i~~i~~~l~W~~~~ 193 (223)
. ....+|.++.|+|||||++++.+... ..+.+.++++.-.++...
T Consensus 129 ~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 129 Q---DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp S---CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred h---hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 2 34699999999999999999985311 357788888888888763
Q ss_pred eec----C---CCeeEEEEEec
Q 027471 194 IYT----N---DNQGMLCVHKT 208 (223)
Q Consensus 194 ~~~----~---~~e~~L~~~K~ 208 (223)
... + ....+++++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 206 LQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EECCCCTTCSSCSCEEEEEEEC
T ss_pred EecCCCCCCCCceeEEEEeecC
Confidence 321 1 12567777763
No 8
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.17 E-value=2.3e-10 Score=93.10 Aligned_cols=121 Identities=14% Similarity=0.100 Sum_probs=87.2
Q ss_pred CceEEEeeCCchHHHHHHhhCCCeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhccccccc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKKRC 149 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~~rC 149 (223)
.-.+|||+|||.|.++..|. ..|+.+.+++. . +.++..-.+.++.-+.+||+|.|..+++ ..
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~----~---------~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~~--- 128 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-NPVHCFDLASL----D---------PRVTVCDMAQVPLEDESVDVAVFCLSLM-GT--- 128 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-SCEEEEESSCS----S---------TTEEESCTTSCSCCTTCEEEEEEESCCC-SS---
T ss_pred CCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC----C---------ceEEEeccccCCCCCCCEeEEEEehhcc-cc---
Confidence 34689999999999999985 67888888766 1 1111111122332238999999988885 22
Q ss_pred chhHHHHhhhhcccCCcEEEEeccHH---HHHHHHHHHHhCCCeeEEee-cCCCeeEEEEEec
Q 027471 150 SLKAVVAEVDRILRPDGNLILRDDAE---TIVEVEDLVKSLHWDVRMIY-TNDNQGMLCVHKT 208 (223)
Q Consensus 150 ~i~~vl~E~DRILRPgG~~ii~D~~~---~~~~i~~i~~~l~W~~~~~~-~~~~e~~L~~~K~ 208 (223)
....+|.|+.|+|+|||.+++.+... ....+..+++...++....+ ....-.+++++|.
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKT 191 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEec
Confidence 35699999999999999999987655 45788888888888875443 2334578888886
No 9
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.16 E-value=7.1e-11 Score=95.14 Aligned_cols=96 Identities=17% Similarity=0.220 Sum_probs=69.4
Q ss_pred eEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcccccccccccCCC-CC-cchhhhhhhhhhccccc
Q 027471 72 RNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT-YP-RTYDLLHADHLFSTIKK 147 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t-yP-rtyDllH~~~lfs~~~~ 147 (223)
.+|||+|||.|.++..|.+++ |+.+.++|. .++.+.++|+..+-. .|..+.. ++ .+||+|.|..++.+..+
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~----~~~~a~~~~~~~~~~-~~~d~~~~~~~~~~D~v~~~~~l~~~~~ 122 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLADRVTALDGSAE----MIAEAGRHGLDNVEF-RQQDLFDWTPDRQWDAVFFAHWLAHVPD 122 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSSEEEEEESCHH----HHHHHGGGCCTTEEE-EECCTTSCCCSSCEEEEEEESCGGGSCH
T ss_pred CeEEEECCCCCHHHHHHHhcCCeEEEEeCCHH----HHHHHHhcCCCCeEE-EecccccCCCCCceeEEEEechhhcCCH
Confidence 489999999999999998774 455555433 566666666533111 1122222 44 99999999999988775
Q ss_pred ccchhHHHHhhhhcccCCcEEEEecc
Q 027471 148 RCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 148 rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
..+..+|.|+-|+|||||.+++.+.
T Consensus 123 -~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 123 -DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp -HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2356899999999999999999854
No 10
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.16 E-value=1.5e-11 Score=97.85 Aligned_cols=119 Identities=13% Similarity=0.141 Sum_probs=77.9
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCccc--ccccccccCCCCCcchhhhhhhhhhcccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESFNTYPRTYDLLHADHLFSTIK 146 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f~tyPrtyDllH~~~lfs~~~ 146 (223)
-.+|||+|||.|.++..|++++ |+.+.++|.......+.+.+.|+.. .+..-.+.++. +.+||+|.|..+|.+..
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~ 111 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLE 111 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGSC
T ss_pred CCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhCC
Confidence 3489999999999999998775 4555554432222222333445522 22211122333 78999999998888765
Q ss_pred cccchhHHHHhhhhcccCCcEEEEeccHH--------------HHHHHHHHHHhCCCeeEE
Q 027471 147 KRCSLKAVVAEVDRILRPDGNLILRDDAE--------------TIVEVEDLVKSLHWDVRM 193 (223)
Q Consensus 147 ~rC~i~~vl~E~DRILRPgG~~ii~D~~~--------------~~~~i~~i~~~l~W~~~~ 193 (223)
. -....+|.++.|+|||||.+++.+... ..++++++++. |+...
T Consensus 112 ~-~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~ 169 (199)
T 2xvm_A 112 A-KTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVK 169 (199)
T ss_dssp G-GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEE
T ss_pred H-HHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEE
Confidence 2 245689999999999999987753211 23577777776 87653
No 11
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.14 E-value=1.1e-11 Score=105.91 Aligned_cols=101 Identities=23% Similarity=0.309 Sum_probs=70.5
Q ss_pred CceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC--CC-cchhhhhhhhhhc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT--YP-RTYDLLHADHLFS 143 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t--yP-rtyDllH~~~lfs 143 (223)
.-.+|||+|||.|.++..|+++ .|+.+.+++.......+.+.+.|+..-+.--+..+.. ++ .+||+|.|..++.
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 161 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFL 161 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhh
Confidence 3468999999999999999876 4566666544222223334445663211111223332 33 8999999999998
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
+..+ ...+|.|+.|+|||||.+++.+.
T Consensus 162 ~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 162 HSPD---KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp GCSC---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcCC---HHHHHHHHHHHcCCCeEEEEEEe
Confidence 8876 46999999999999999999853
No 12
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.14 E-value=2.3e-11 Score=105.59 Aligned_cols=92 Identities=15% Similarity=0.116 Sum_probs=63.7
Q ss_pred eEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhccccccc
Q 027471 72 RNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKKRC 149 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~~rC 149 (223)
.+|||+|||+|.++..|++++ |+.+.+++. .++.+.++.=+...+.-.|.++.-+++||+|.|..+|+.. +
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~----ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~-~-- 113 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFERVHAVDPGEA----QIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF-D-- 113 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSEEEEEESCHH----HHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTC-C--
T ss_pred CCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHH----hhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHh-h--
Confidence 479999999999999999984 555665543 2222222222223332234444334999999999888543 3
Q ss_pred chhHHHHhhhhcccCCcEEEEe
Q 027471 150 SLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 150 ~i~~vl~E~DRILRPgG~~ii~ 171 (223)
.+.++.|+.|||||||.|++-
T Consensus 114 -~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 114 -LDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp -HHHHHHHHHHHEEEEEEEEEE
T ss_pred -HHHHHHHHHHHcCCCCEEEEE
Confidence 468999999999999999775
No 13
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.14 E-value=7.8e-12 Score=101.66 Aligned_cols=103 Identities=16% Similarity=0.295 Sum_probs=72.6
Q ss_pred CCCCCceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhC----cccccccccccCCCCCcchhhhhhh
Q 027471 66 INWSFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERG----LFGLYHDWCESFNTYPRTYDLLHAD 139 (223)
Q Consensus 66 i~~~~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRG----Li~~~~dwce~f~tyPrtyDllH~~ 139 (223)
+....-.+|||+|||.|.++..|.+++ |+.+.+++. .++.+.++. -+-.+..-.+.++ .+.+||+|.|.
T Consensus 47 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~ 121 (216)
T 3ofk_A 47 LSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPR----AIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVA 121 (216)
T ss_dssp TTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHH----HHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEE
T ss_pred cccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHH----HHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEc
Confidence 344567899999999999999999884 445555433 444444432 2223332112222 24999999999
Q ss_pred hhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 140 HLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 140 ~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
.+|.+..+.-.+..+|.++.|+|||||.+++.+.
T Consensus 122 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 122 EVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp SCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 9999888655566889999999999999999753
No 14
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.13 E-value=2.6e-11 Score=98.81 Aligned_cols=94 Identities=19% Similarity=0.312 Sum_probs=67.8
Q ss_pred eEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHhhCc--ccccccccccCCCCCcchhhhhhhhhhccccc
Q 027471 72 RNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYERGL--FGLYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eRGL--i~~~~dwce~f~tyPrtyDllH~~~lfs~~~~ 147 (223)
.+|||+|||.|.++..|.++ .|+.+.+++. .++.+.++-- +..++.-.+.+ ..+.+||+|+|.+++.+..+
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~----~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFNDITCVEASEE----AISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCSCEEEEESCHH----HHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSS
T ss_pred CcEEEECCCCCHHHHHHHHhCCcEEEEeCCHH----HHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcC
Confidence 36999999999999999887 4566665443 4444544421 22222212223 23489999999999998865
Q ss_pred ccchhHHHHhhh-hcccCCcEEEEecc
Q 027471 148 RCSLKAVVAEVD-RILRPDGNLILRDD 173 (223)
Q Consensus 148 rC~i~~vl~E~D-RILRPgG~~ii~D~ 173 (223)
. +.+|.|+. |+|||||++++.+.
T Consensus 119 ~---~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 119 P---VALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp H---HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred H---HHHHHHHHHHhcCCCCEEEEEcC
Confidence 3 68999999 99999999999853
No 15
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.13 E-value=2.7e-11 Score=104.90 Aligned_cols=108 Identities=7% Similarity=0.101 Sum_probs=73.3
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhh
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHA 138 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~ 138 (223)
+.+++.. -.+|||+|||.|.++..|+++ .|+.+.++|.......+.+.+.|+..-+.-.+..+..+|.+||+|.|
T Consensus 84 ~~~~~~~--~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~ 161 (318)
T 2fk8_A 84 DKLDLKP--GMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVS 161 (318)
T ss_dssp TTSCCCT--TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEE
T ss_pred HhcCCCC--cCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEE
Confidence 3444443 458999999999999999866 45566665442221222233336543222223445556799999999
Q ss_pred hhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 139 DHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 139 ~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
..+|.+..+ -....+|.|+.|+|||||.+++.+
T Consensus 162 ~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 162 IEAFEHFGH-ENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp ESCGGGTCG-GGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred eChHHhcCH-HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999988743 235689999999999999999974
No 16
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.12 E-value=2.6e-10 Score=92.60 Aligned_cols=131 Identities=15% Similarity=0.183 Sum_probs=88.6
Q ss_pred CceEEEeeCCchHHHHHHhhCCCeE--EEEecCCCCCCChhhHHhhCc--ccccccccccCCC--CCcchhhhhhhhhhc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLKVW--VMNVVPIESPDTLPIIYERGL--FGLYHDWCESFNT--YPRTYDLLHADHLFS 143 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~V~--vmnv~p~~~~~~l~~i~eRGL--i~~~~dwce~f~t--yPrtyDllH~~~lfs 143 (223)
.-.+|||+|||.|.++..|.+++.- .+.++| ..++.+.++-- +-.+. ..+.. ++.+||+|.|..+|.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~l~ 117 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSR----EMRMIAKEKLPKEFSITE---GDFLSFEVPTSIDTIVSTYAFH 117 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCH----HHHHHHHHHSCTTCCEES---CCSSSCCCCSCCSEEEEESCGG
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCH----HHHHHHHHhCCCceEEEe---CChhhcCCCCCeEEEEECcchh
Confidence 4568999999999999999987543 343332 24555555422 22222 23333 338999999999998
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEeccH----H---------------------------HHHHHHHHHHhCCCeeE
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRDDA----E---------------------------TIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~----~---------------------------~~~~i~~i~~~l~W~~~ 192 (223)
+..+.- ...+|.|+.|+|||||.+++.+.. . ..+.++++++.-.+++.
T Consensus 118 ~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~ 196 (220)
T 3hnr_A 118 HLTDDE-KNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVT 196 (220)
T ss_dssp GSCHHH-HHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEE
T ss_pred cCChHH-HHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEE
Confidence 876531 234899999999999999998521 1 12567777888888776
Q ss_pred EeecCCCeeEEEEEec
Q 027471 193 MIYTNDNQGMLCVHKT 208 (223)
Q Consensus 193 ~~~~~~~e~~L~~~K~ 208 (223)
.....+-.-++.++|+
T Consensus 197 ~~~~~~~~w~~~~~~~ 212 (220)
T 3hnr_A 197 FTRLNHFVWVMEATKQ 212 (220)
T ss_dssp EEECSSSEEEEEEEEC
T ss_pred EeeccceEEEEeehhh
Confidence 5544555667777764
No 17
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.12 E-value=2.2e-11 Score=101.20 Aligned_cols=96 Identities=15% Similarity=0.230 Sum_probs=69.2
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCccccc-ccccccCCCCC-cchhhhhhhhhhcccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFGLY-HDWCESFNTYP-RTYDLLHADHLFSTIK 146 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~~~-~dwce~f~tyP-rtyDllH~~~lfs~~~ 146 (223)
-.+|||+|||.|.++.+|.+++ |+.+.+++ ..++.+.++ +..+ .|..+.+..++ ++||+|.|.+++.+..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~----~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~ 115 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGIESIGVDINE----DMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLD 115 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTCCEEEECSCH----HHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSC
T ss_pred CCeEEEEeCCCCHHHHHHHhCCCcEEEEECCH----HHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCC
Confidence 3689999999999999998875 44444432 356666666 3322 23222222455 9999999999998886
Q ss_pred cccchhHHHHhhhhcccCCcEEEEecc
Q 027471 147 KRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 147 ~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
+ -.+..+|.|+.|+|||||++++...
T Consensus 116 ~-~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 116 P-ERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp G-GGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred c-HHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 3 2457999999999999999999843
No 18
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.12 E-value=4e-11 Score=101.16 Aligned_cols=99 Identities=14% Similarity=0.081 Sum_probs=70.3
Q ss_pred CceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCccc---ccccccccCCCCCcchhhhhhhhhhc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFG---LYHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~---~~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
.-.+|||+|||.|.++..|++. .|+.+.++|.......+.+.+.|+.. ++..-.+.++.-+.+||+|+|.++|.
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCce
Confidence 4568999999999999999987 45666665543322333344556643 22221123332238999999999988
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+. ....+|.++.|+|||||++++.+
T Consensus 126 ~~----~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 126 NI----GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp GT----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ec----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 77 35789999999999999999985
No 19
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.12 E-value=1.1e-11 Score=103.88 Aligned_cols=99 Identities=18% Similarity=0.203 Sum_probs=69.0
Q ss_pred CceEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHhhCccc--ccccccccCCCCC-cchhhhhhhhhhcc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESFNTYP-RTYDLLHADHLFST 144 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f~tyP-rtyDllH~~~lfs~ 144 (223)
.-.+|||+|||.|.++..|.++ .|+.+.++|.......+.+.++|+.. .+..-.+.++ +| .+||+|.|..++.+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~fD~V~~~~~l~~ 115 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FTDERFHIVTCRIAAHH 115 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC-CCCCCEEEEEEhhhhHh
Confidence 4568999999999999999887 45666665442222223334446532 2221112333 44 89999999988888
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEec
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+.+ .+.+|.|+.|+|||||.+++.+
T Consensus 116 ~~d---~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 116 FPN---PASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCC---HHHHHHHHHHHcCCCCEEEEEE
Confidence 765 3689999999999999999974
No 20
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.12 E-value=9.6e-11 Score=95.76 Aligned_cols=111 Identities=17% Similarity=0.246 Sum_probs=72.5
Q ss_pred hhHHHHHhhhhhhccCCCCCCceEEEeeCCchHHHHHHhhCCCe--EEEEecCCCCCCChhhHHh----hCc-ccccccc
Q 027471 50 QHWKNVVSKSYLNGMGINWSFVRNVMDMRAVYGGFAAALKDLKV--WVMNVVPIESPDTLPIIYE----RGL-FGLYHDW 122 (223)
Q Consensus 50 ~~W~~~v~~~Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~V--~vmnv~p~~~~~~l~~i~e----RGL-i~~~~dw 122 (223)
+.|.+.+.+ ++.... ..-.+|||+|||.|.++..|.+++. +.+.++|. .++.+.+ .|+ +..+.
T Consensus 21 ~~~~~~~~~-~l~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~----~~~~a~~~~~~~~~~~~~~~-- 90 (246)
T 1y8c_A 21 KKWSDFIIE-KCVENN---LVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQE----MLSEAENKFRSQGLKPRLAC-- 90 (246)
T ss_dssp HHHHHHHHH-HHHTTT---CCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHH----HHHHHHHHHHHTTCCCEEEC--
T ss_pred HHHHHHHHH-HHHHhC---CCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHH----HHHHHHHHHhhcCCCeEEEe--
Confidence 445555554 444321 1345899999999999999988854 34443332 3333333 333 22222
Q ss_pred cccCCC--CCcchhhhhhhh-hhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 123 CESFNT--YPRTYDLLHADH-LFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 123 ce~f~t--yPrtyDllH~~~-lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
..+.. ++.+||+|.|.. +|.+..+.-....+|.++.|+|+|||.++++
T Consensus 91 -~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 91 -QDISNLNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp -CCGGGCCCSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -cccccCCccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 22222 448999999998 9988754334679999999999999999985
No 21
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.12 E-value=1.8e-11 Score=102.90 Aligned_cols=107 Identities=17% Similarity=0.198 Sum_probs=72.0
Q ss_pred hhccCCCCCCceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC--CC-cchh
Q 027471 61 LNGMGINWSFVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT--YP-RTYD 134 (223)
Q Consensus 61 ~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t--yP-rtyD 134 (223)
++.+++.. -.+|||+|||.|.++..|+++ .|+.+.+++.......+.+.+.|+..-+.--+..+.. ++ .+||
T Consensus 54 ~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 131 (273)
T 3bus_A 54 IALLDVRS--GDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFD 131 (273)
T ss_dssp HHHSCCCT--TCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEE
T ss_pred HHhcCCCC--CCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCcc
Confidence 34455443 458999999999999999763 4666666544222222333344663211111223322 44 8999
Q ss_pred hhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 135 LLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 135 llH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+|.|..+|.+..+. ..+|.|+.|+|||||.+++.+
T Consensus 132 ~v~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 132 AVWALESLHHMPDR---GRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEEEESCTTTSSCH---HHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEechhhhCCCH---HHHHHHHHHHcCCCeEEEEEE
Confidence 99999999887653 689999999999999999985
No 22
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.11 E-value=3.8e-11 Score=104.01 Aligned_cols=138 Identities=12% Similarity=0.025 Sum_probs=92.2
Q ss_pred ceEEEeeCCchHHHHHHhh--CC---CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC--CCcchhhhhhhhhhc
Q 027471 71 VRNVMDMRAVYGGFAAALK--DL---KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT--YPRTYDLLHADHLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~--~~---~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t--yPrtyDllH~~~lfs 143 (223)
-.+|||+|||.|.++..|+ .. .|+.+.++|.......+.+.+.|+..-+.-.|..+.. ++.+||+|.|..++.
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 198 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNGLNI 198 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCSSGG
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECChhh
Confidence 4579999999999999994 22 4666666554322233333444553211111223333 459999999998888
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEeccH---------------------------------------HHHHHHHHHH
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRDDA---------------------------------------ETIVEVEDLV 184 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~---------------------------------------~~~~~i~~i~ 184 (223)
+..+......++.|+-|+|||||.+++.+.. ...+.+.+++
T Consensus 199 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 278 (305)
T 3ocj_A 199 YEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQL 278 (305)
T ss_dssp GCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHH
Confidence 8766544456899999999999999998611 1256778888
Q ss_pred HhCCCeeEEee--cCCCeeEEEEEec
Q 027471 185 KSLHWDVRMIY--TNDNQGMLCVHKT 208 (223)
Q Consensus 185 ~~l~W~~~~~~--~~~~e~~L~~~K~ 208 (223)
+.-.++..... ....-..++++|+
T Consensus 279 ~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 279 EEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHCCCEEEEEEcccCceeeEEEEecC
Confidence 88888875433 2334567888885
No 23
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.11 E-value=2.4e-11 Score=100.63 Aligned_cols=120 Identities=14% Similarity=0.122 Sum_probs=82.3
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhC----cccccccccccCCCCCcchhhhhhhh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERG----LFGLYHDWCESFNTYPRTYDLLHADH 140 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRG----Li~~~~dwce~f~tyPrtyDllH~~~ 140 (223)
...-.+|||+|||.|.++..|+++ .|+.+.++|. .++.+.++- -+-.++.-.+.++.-+.+||+|.|..
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 166 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKH----MLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQW 166 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHH----HHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEES
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHH----HHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcc
Confidence 334678999999999999998766 3666665443 444444442 22222221223332338999999999
Q ss_pred hhcccccccchhHHHHhhhhcccCCcEEEEeccHH----------------HHHHHHHHHHhCCCeeE
Q 027471 141 LFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE----------------TIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 141 lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~----------------~~~~i~~i~~~l~W~~~ 192 (223)
++.+..+ -....+|.++.|+|||||.+++.+... ..+.+.++++.-.++..
T Consensus 167 ~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 233 (254)
T 1xtp_A 167 TAIYLTD-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVV 233 (254)
T ss_dssp CGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEE
T ss_pred hhhhCCH-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEE
Confidence 9888754 235689999999999999999987411 23677778777777764
No 24
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.11 E-value=9.3e-11 Score=96.89 Aligned_cols=117 Identities=16% Similarity=0.162 Sum_probs=80.3
Q ss_pred eEEEeeCCchHHHHHHhhCCCeEEEE--ecCCCCCCChhhHHhh----CcccccccccccCCCC--Ccchhhhhhhhhhc
Q 027471 72 RNVMDMRAVYGGFAAALKDLKVWVMN--VVPIESPDTLPIIYER----GLFGLYHDWCESFNTY--PRTYDLLHADHLFS 143 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~V~vmn--v~p~~~~~~l~~i~eR----GLi~~~~dwce~f~ty--PrtyDllH~~~lfs 143 (223)
.+|||+|||.|.++..|++.+..|.- ++|. .++.+.++ |+..-+.-.|..+..+ +.+||+|.|..+|.
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISES----ALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCHH----HHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHH----HHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhh
Confidence 48999999999999999988654443 3332 33333333 3322222222334333 37999999998888
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEeccHH-----------HHHHHHHHHHhCCCeeEE
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRDDAE-----------TIVEVEDLVKSLHWDVRM 193 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~-----------~~~~i~~i~~~l~W~~~~ 193 (223)
+... .....+|.++.|+|||||.+++.+... ..+.++++++.-.|+...
T Consensus 144 ~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 144 AIEP-EMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp TSCG-GGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEE
T ss_pred cCCH-HHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEE
Confidence 7752 345689999999999999999863211 257888889988888753
No 25
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.11 E-value=1.1e-11 Score=103.00 Aligned_cols=98 Identities=12% Similarity=0.101 Sum_probs=69.6
Q ss_pred ceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCccc---ccccccccCCCCCcchhhhhhhhhhcc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFG---LYHDWCESFNTYPRTYDLLHADHLFST 144 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~---~~~dwce~f~tyPrtyDllH~~~lfs~ 144 (223)
-.+|||+|||.|.++..|+++ .|+.+.++|.......+.+.+.|+.. .++.-.+.++.-+.+||+|+|.+++.+
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYN 126 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCC
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhh
Confidence 348999999999999999876 46666665543322333344556643 222111333322389999999998887
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEec
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
. ..+.+|.++.|+|||||.+++.+
T Consensus 127 ~----~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 127 I----GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp C----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred c----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 6 35689999999999999999986
No 26
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.10 E-value=2.2e-10 Score=93.51 Aligned_cols=134 Identities=14% Similarity=0.145 Sum_probs=86.9
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCc-------ccccccccccCCC---CCcchhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGL-------FGLYHDWCESFNT---YPRTYDLL 136 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGL-------i~~~~dwce~f~t---yPrtyDll 136 (223)
-.+|||+|||.|.++.+|+++ .|+.+.++|.......+.+...|+ +-++. ..+.. .+.+||+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQ---SSLVYRDKRFSGYDAA 106 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEE---CCSSSCCGGGTTCSEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEe---CcccccccccCCCCEE
Confidence 468999999999999999886 355566654422212222222232 22222 23333 23799999
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccHHH----------------------HHHHH----HHHHhCCCe
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAET----------------------IVEVE----DLVKSLHWD 190 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~----------------------~~~i~----~i~~~l~W~ 190 (223)
.|..++.+..+. .+..+|.++.|+|||||.++.+...+. ...++ ++++.-.++
T Consensus 107 ~~~~~l~~~~~~-~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~ 185 (219)
T 3jwg_A 107 TVIEVIEHLDEN-RLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYS 185 (219)
T ss_dssp EEESCGGGCCHH-HHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEE
T ss_pred EEHHHHHhCCHH-HHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcE
Confidence 999999988642 346899999999999998887643321 23334 777777787
Q ss_pred eEEee---c----CCCeeEEEEEec
Q 027471 191 VRMIY---T----NDNQGMLCVHKT 208 (223)
Q Consensus 191 ~~~~~---~----~~~e~~L~~~K~ 208 (223)
+.... . ....++.+++|.
T Consensus 186 v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 186 VRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp EEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred EEEEecCCccccCCCCeEEEEEecc
Confidence 75432 1 235788999885
No 27
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.09 E-value=5.3e-11 Score=98.64 Aligned_cols=97 Identities=14% Similarity=0.209 Sum_probs=68.6
Q ss_pred CceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhC----cccc-cccccccCCCCCcchhhhhhhhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERG----LFGL-YHDWCESFNTYPRTYDLLHADHL 141 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRG----Li~~-~~dwce~f~tyPrtyDllH~~~l 141 (223)
.-.+|||+|||.|.++..|+++ .|+.+.++|. .++.+.++. -+-. ..|.. .++.-+++||+|+|..+
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 129 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSN----IVNMANERVSGNNKIIFEANDIL-TKEFPENNFDLIYSRDA 129 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHH----HHHHHHHTCCSCTTEEEEECCTT-TCCCCTTCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHhhcCCCeEEEECccc-cCCCCCCcEEEEeHHHH
Confidence 4568999999999999999876 4556666443 455555543 1222 22322 23322499999999999
Q ss_pred hcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 142 FSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 142 fs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+.+... -....+|.|+.|+|||||.+++.+
T Consensus 130 l~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 130 ILALSL-ENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp GGGSCH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhcCh-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 988832 234699999999999999999985
No 28
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.08 E-value=1.4e-10 Score=90.91 Aligned_cols=134 Identities=14% Similarity=0.158 Sum_probs=88.8
Q ss_pred CceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhccccc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~~ 147 (223)
.-.+|||+|||.|.++.+|.++. |+.+.+. +..++.+.++ ... +.-.+..++.-+.+||+|.|..++.+..+
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s----~~~~~~a~~~-~~~-v~~~~~d~~~~~~~~D~v~~~~~l~~~~~ 90 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDIN----VIALKEVKEK-FDS-VITLSDPKEIPDNSVDFILFANSFHDMDD 90 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSC----HHHHHHHHHH-CTT-SEEESSGGGSCTTCEEEEEEESCSTTCSC
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCC----HHHHHHHHHh-CCC-cEEEeCCCCCCCCceEEEEEccchhcccC
Confidence 35789999999999999999985 3333332 2356666665 111 11112233323389999999999988754
Q ss_pred ccchhHHHHhhhhcccCCcEEEEeccHH-------------HHHHHHHHHHhCCCeeEEe-ecCCCeeEEEEEecccCCC
Q 027471 148 RCSLKAVVAEVDRILRPDGNLILRDDAE-------------TIVEVEDLVKSLHWDVRMI-YTNDNQGMLCVHKTYWRPK 213 (223)
Q Consensus 148 rC~i~~vl~E~DRILRPgG~~ii~D~~~-------------~~~~i~~i~~~l~W~~~~~-~~~~~e~~L~~~K~~w~~~ 213 (223)
...+|.|+-|+|||||.+++.+... ....++++++ .|+.... +.....-.+++.|+-=++.
T Consensus 91 ---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~~~~~~~~ 165 (170)
T 3i9f_A 91 ---KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVLKRKTSEGH 165 (170)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEEEECCCCSC
T ss_pred ---HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCCceEEEEEecCCCCcc
Confidence 4689999999999999999984321 1456777766 6765433 2334567777777654443
Q ss_pred c
Q 027471 214 E 214 (223)
Q Consensus 214 ~ 214 (223)
.
T Consensus 166 ~ 166 (170)
T 3i9f_A 166 H 166 (170)
T ss_dssp C
T ss_pred c
Confidence 3
No 29
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.08 E-value=2.3e-11 Score=101.50 Aligned_cols=108 Identities=19% Similarity=0.222 Sum_probs=73.8
Q ss_pred hhhccCCCCCCceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCccc--ccccccccCCCCCcchhh
Q 027471 60 YLNGMGINWSFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESFNTYPRTYDL 135 (223)
Q Consensus 60 Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f~tyPrtyDl 135 (223)
+++.+++.. -.+|||+|||.|.++..|.+.. |+.+.++|.......+.+.+.|+.. .+..-.+.++.-+++||+
T Consensus 13 ~~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 90 (239)
T 1xxl_A 13 MIKTAECRA--EHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDI 90 (239)
T ss_dssp HHHHHTCCT--TCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEE
T ss_pred HHHHhCcCC--CCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEE
Confidence 456666554 4589999999999999998874 5555554432222223333446532 233222334433389999
Q ss_pred hhhhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 136 LHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 136 lH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
|.|..++.++.+ ...+|.|+.|+|||||.+++.+
T Consensus 91 v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 91 ITCRYAAHHFSD---VRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCchhhccC---HHHHHHHHHHHcCCCcEEEEEE
Confidence 999988888764 4689999999999999999974
No 30
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.08 E-value=9.7e-11 Score=94.90 Aligned_cols=129 Identities=16% Similarity=0.163 Sum_probs=83.3
Q ss_pred ceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC-CCcchhhhhhhhhhcccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT-YPRTYDLLHADHLFSTIK 146 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t-yPrtyDllH~~~lfs~~~ 146 (223)
-.+|||+|||.|.++..|.+. .|+.+.++|.......+.+.+.|+.. +.--+..+.. .+.+||+|.|...+..
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~fD~i~~~~~~~~-- 137 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADVDGKFDLIVANILAEI-- 137 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTCCSCEEEEEEESCHHH--
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccCCCCceEEEECCcHHH--
Confidence 358999999999999999876 35556665442222223333346543 1111223333 4599999999865543
Q ss_pred cccchhHHHHhhhhcccCCcEEEEecc-HHHHHHHHHHHHhCCCeeEEeecCCCeeEEEEE
Q 027471 147 KRCSLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVH 206 (223)
Q Consensus 147 ~rC~i~~vl~E~DRILRPgG~~ii~D~-~~~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~ 206 (223)
+..++.++.|+|||||.+++.+. ......+.++++...++.......+.-..++.+
T Consensus 138 ----~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~~ 194 (205)
T 3grz_A 138 ----LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRAGRWIGLAIS 194 (205)
T ss_dssp ----HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEEEETTEEEEEEE
T ss_pred ----HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEeeccCCEEEEEEe
Confidence 45889999999999999999753 334677888888888877544333333333333
No 31
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.07 E-value=1.4e-10 Score=90.86 Aligned_cols=112 Identities=14% Similarity=0.106 Sum_probs=76.2
Q ss_pred CceEEEeeCCchHHHHHHhhCC--C--eEEEEecCCCCCCChhhHH----hhCcc---cccccccccCCCCCcchhhhhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL--K--VWVMNVVPIESPDTLPIIY----ERGLF---GLYHDWCESFNTYPRTYDLLHA 138 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~--~--V~vmnv~p~~~~~~l~~i~----eRGLi---~~~~dwce~f~tyPrtyDllH~ 138 (223)
.-.+|||+|||.|.++..+++. + |+.+.+.|. .++.+. +.|+. -+..|..+.|+..+.+||+|.+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~----~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEE----RRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFI 100 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHH----HHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHH----HHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEE
Confidence 3468999999999999999887 3 444444332 333333 33554 2223333444444478999998
Q ss_pred hhhhcccccccchhHHHHhhhhcccCCcEEEEecc-HHHHHHHHHHHHhCCCeeE
Q 027471 139 DHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 139 ~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~-~~~~~~i~~i~~~l~W~~~ 192 (223)
...+.+ ..++.++.|+|||||.+++.+. .+....+.++++....+..
T Consensus 101 ~~~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 101 GGGLTA-------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp CC-TTC-------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred CCcccH-------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 866654 4799999999999999999865 4456667777777766654
No 32
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.07 E-value=1.5e-10 Score=94.71 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=66.6
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCc-ccccccccccCCCCCcchhhhhh-hhhhcccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNTYPRTYDLLHA-DHLFSTIK 146 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~tyPrtyDllH~-~~lfs~~~ 146 (223)
-.+|||+|||.|.++..|.++. |+.+.++|. .++.+.++.- +..+..-.+.++ ++.+||+|.| .++|.+..
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~----~~~~a~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFGDTAGLELSED----MLTHARKRLPDATLHQGDMRDFR-LGRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHSEEEEEESCHH----HHHHHHHHCTTCEEEECCTTTCC-CSSCEEEEEECTTGGGGCC
T ss_pred CCeEEEecccCCHHHHHHHHhCCcEEEEeCCHH----HHHHHHHhCCCCEEEECCHHHcc-cCCCCcEEEEcCchHhhcC
Confidence 4689999999999999998773 555555433 4555555421 222221111222 2689999996 44777765
Q ss_pred cccchhHHHHhhhhcccCCcEEEEec
Q 027471 147 KRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 147 ~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+.-....+|.++.|+|||||.+++++
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 116 TTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 44456799999999999999999974
No 33
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.07 E-value=1.5e-10 Score=92.12 Aligned_cols=121 Identities=18% Similarity=0.143 Sum_probs=75.3
Q ss_pred eEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHhhCc--ccccccccccCCCCC-cchhhhhhh-hhhccc
Q 027471 72 RNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYERGL--FGLYHDWCESFNTYP-RTYDLLHAD-HLFSTI 145 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eRGL--i~~~~dwce~f~tyP-rtyDllH~~-~lfs~~ 145 (223)
.+|||+|||+|.++..|+++ .|+.+.++|..-....+.+.+.|+ +-++++-.+.+..++ .+||+|.++ +.+...
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~ 103 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLPSA 103 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-----
T ss_pred CEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCc
Confidence 57999999999999999987 456666655433323333444566 334444444444455 889999665 222210
Q ss_pred c-----cccchhHHHHhhhhcccCCcEEEEecc------HHHHHHHHHHHHhCC---CeeE
Q 027471 146 K-----KRCSLKAVVAEVDRILRPDGNLILRDD------AETIVEVEDLVKSLH---WDVR 192 (223)
Q Consensus 146 ~-----~rC~i~~vl~E~DRILRPgG~~ii~D~------~~~~~~i~~i~~~l~---W~~~ 192 (223)
. ..-....+|.|+-|+|||||.+++..- .+....+.+.++.+. |.+.
T Consensus 104 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 164 (185)
T 3mti_A 104 DKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAM 164 (185)
T ss_dssp ------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEE
T ss_pred chhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEE
Confidence 0 111234778999999999999998732 223456666676665 5554
No 34
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.07 E-value=2.3e-11 Score=105.45 Aligned_cols=101 Identities=11% Similarity=0.132 Sum_probs=70.4
Q ss_pred eEEEeeCCchHHHHHHhhCC----C--eEEEEecCCCCCCChhhHHhhCcccccccccccCCCCC-cchhhhhhhhhhcc
Q 027471 72 RNVMDMRAVYGGFAAALKDL----K--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFST 144 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~----~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP-rtyDllH~~~lfs~ 144 (223)
.+|||+|||+|.++.+|+++ + |+.+.++|..-....+.+.+.|+..-+.=.|+.+..+| ..||++.|..++++
T Consensus 72 ~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~~ 151 (261)
T 4gek_A 72 TQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQF 151 (261)
T ss_dssp CEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGGG
T ss_pred CEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeeee
Confidence 47999999999999888754 3 56666655432222233334466443333355677777 78999999877776
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
..+ -....+|.|+.|+|||||.|+++|.
T Consensus 152 ~~~-~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 152 LEP-SERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp SCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCc-hhHhHHHHHHHHHcCCCcEEEEEec
Confidence 543 1235789999999999999999854
No 35
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.06 E-value=1.8e-10 Score=92.01 Aligned_cols=157 Identities=13% Similarity=0.044 Sum_probs=91.1
Q ss_pred HhhhhHHHHHhhhhhhccCCCCCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCc-cc-ccc
Q 027471 47 ADYQHWKNVVSKSYLNGMGINWSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGL-FG-LYH 120 (223)
Q Consensus 47 ~D~~~W~~~v~~~Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGL-i~-~~~ 120 (223)
.+++.+.+.+.+ ++..+ ..-.+|||+|||.|.++.+|++. .|+.+.+.|.......+.+...|+ +- ...
T Consensus 12 ~~~~~~~~~~~~-~l~~~----~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 86 (215)
T 4dzr_A 12 PDTEVLVEEAIR-FLKRM----PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAA 86 (215)
T ss_dssp HHHHHHHHHHHH-HHTTC----CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHH
T ss_pred ccHHHHHHHHHH-Hhhhc----CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEc
Confidence 567777776665 44321 33578999999999999998876 466677766654333333333343 11 334
Q ss_pred cccccCCC---CCcchhhhhhhhhhccccc-------------ccc----------hhHHHHhhhhcccCCcE-EEEecc
Q 027471 121 DWCESFNT---YPRTYDLLHADHLFSTIKK-------------RCS----------LKAVVAEVDRILRPDGN-LILRDD 173 (223)
Q Consensus 121 dwce~f~t---yPrtyDllH~~~lfs~~~~-------------rC~----------i~~vl~E~DRILRPgG~-~ii~D~ 173 (223)
|..+.++. .+.+||+|.|+.-|..... ... +..++.++.|+|||||. +++.-.
T Consensus 87 d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 87 DGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred chHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 44443332 2378999988544322110 011 16889999999999999 777655
Q ss_pred HHHHHHHHHHHH--hCCCeeE--EeecCCCeeEEEEEec
Q 027471 174 AETIVEVEDLVK--SLHWDVR--MIYTNDNQGMLCVHKT 208 (223)
Q Consensus 174 ~~~~~~i~~i~~--~l~W~~~--~~~~~~~e~~L~~~K~ 208 (223)
......+..+++ .-.|... ..+..+.+++++++|.
T Consensus 167 ~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 167 HNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp TSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEEC
T ss_pred CccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEc
Confidence 555667777777 5666542 2344567899999874
No 36
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.04 E-value=3.5e-10 Score=91.01 Aligned_cols=132 Identities=11% Similarity=0.108 Sum_probs=89.4
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCc-ccccccccccCCCCCcchhhhhhhhhhccccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~tyPrtyDllH~~~lfs~~~~ 147 (223)
-.+|||+|||.|.++..|.+++ |+.+.+++ ..++.+.++.- +..+..-.+.++.-+++||+|.|..+|.+...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPAT----RLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCH----HHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCH----HHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCH
Confidence 4579999999999999998885 44444432 25566666521 11222111233323489999999998888752
Q ss_pred ccchhHHHHhhhhcccCCcEEEEeccHH----------------HHHHHHHHHHhCCCeeEEee--cCCCeeEEEEEe
Q 027471 148 RCSLKAVVAEVDRILRPDGNLILRDDAE----------------TIVEVEDLVKSLHWDVRMIY--TNDNQGMLCVHK 207 (223)
Q Consensus 148 rC~i~~vl~E~DRILRPgG~~ii~D~~~----------------~~~~i~~i~~~l~W~~~~~~--~~~~e~~L~~~K 207 (223)
-....+|.++.|+|||||.+++.+... ....+.++++...++..... .......|...|
T Consensus 118 -~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~~~~ 194 (203)
T 3h2b_A 118 -GELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLTAEA 194 (203)
T ss_dssp -TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEEEEE
T ss_pred -HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhhhhh
Confidence 245799999999999999999985321 25788899999999876443 223455555544
No 37
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.04 E-value=2.6e-11 Score=102.46 Aligned_cols=116 Identities=14% Similarity=0.175 Sum_probs=72.9
Q ss_pred hhHHHHHhhhhhhccCCCCCCceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHh----hCccc--ccc
Q 027471 50 QHWKNVVSKSYLNGMGINWSFVRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYE----RGLFG--LYH 120 (223)
Q Consensus 50 ~~W~~~v~~~Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~e----RGLi~--~~~ 120 (223)
+.|...+.+.-.+.+ ...-..|||+|||.|.++.+|.++. |+.+.+.|. .++.+.+ .|.-- ...
T Consensus 43 ~~we~~~m~~~a~~~---~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~----~~~~a~~~~~~~~~~~~~~~~ 115 (236)
T 3orh_A 43 ERWETPYMHALAAAA---SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDG----VFQRLRDWAPRQTHKVIPLKG 115 (236)
T ss_dssp EGGGHHHHHHHHHHH---TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHH----HHHHHHHHGGGCSSEEEEEES
T ss_pred HHHHHHHHHHHHHhh---ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHH----HHHHHHHHHhhCCCceEEEee
Confidence 357555443122222 2234689999999999999998873 566666554 4444433 33321 234
Q ss_pred cccccCCCCC-cchhhhhhhhhhccccc--ccchhHHHHhhhhcccCCcEEEEec
Q 027471 121 DWCESFNTYP-RTYDLLHADHLFSTIKK--RCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 121 dwce~f~tyP-rtyDllH~~~lfs~~~~--rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
||.+....+| .+||.|..+.+.+.... .-..+.++.|+-|+|||||.|++-+
T Consensus 116 ~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 116 LWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 4544455566 88998876544443321 2234589999999999999999863
No 38
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.03 E-value=3.1e-11 Score=98.01 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=68.2
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHh----hCc-------ccccccccccCCCCCcchhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYE----RGL-------FGLYHDWCESFNTYPRTYDLLH 137 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~e----RGL-------i~~~~dwce~f~tyPrtyDllH 137 (223)
-.+|||+|||.|.++.+|++++ |+.+.++|. .++.+.+ .|+ +-.+..-.+.++.-+.+||+|.
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGYSVTGIDINSE----AIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCHH----HHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCCCeEEEEECCHH----HHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 4589999999999999998885 444554433 3333333 344 2222211122322238999999
Q ss_pred hhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 138 ADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 138 ~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
|..++.+..+.-....+|.++.|+|||||.+++.+.
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 999998887654455899999999999999999853
No 39
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.03 E-value=1.2e-10 Score=94.41 Aligned_cols=122 Identities=11% Similarity=0.055 Sum_probs=80.3
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCCC----eEEEEecCCCCCCChhhHHhhCcccccccccccC-CCCC--cchh
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDLK----VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESF-NTYP--RTYD 134 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~----V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f-~tyP--rtyD 134 (223)
..+++.. -.+|||+|||.|.++..|++.. |+.+.++|.......+.+...|+.. +.-.+..+ ...+ .+||
T Consensus 34 ~~l~~~~--~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~~D 110 (204)
T 3e05_A 34 SKLRLQD--DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARN-VTLVEAFAPEGLDDLPDPD 110 (204)
T ss_dssp HHTTCCT--TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTT-EEEEECCTTTTCTTSCCCS
T ss_pred HHcCCCC--CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeCChhhhhhcCCCCC
Confidence 3444444 4689999999999999998763 6666665543222223333346521 11112233 2222 6799
Q ss_pred hhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc-HHHHHHHHHHHHhCCCeeE
Q 027471 135 LLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 135 llH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~-~~~~~~i~~i~~~l~W~~~ 192 (223)
+|-+...+. ....++.++.|+|||||.+++... .+....+.++++...|+..
T Consensus 111 ~i~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 163 (204)
T 3e05_A 111 RVFIGGSGG------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVE 163 (204)
T ss_dssp EEEESCCTT------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCCc------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCcee
Confidence 998875443 456899999999999999999854 4567788888888888644
No 40
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.03 E-value=6.7e-11 Score=101.47 Aligned_cols=101 Identities=10% Similarity=0.105 Sum_probs=69.0
Q ss_pred CceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCc-ccccccccccCCCCCcchhhhhhhhhhc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
.-.+|||+|||+|.++..|++. .|+.+.++|.......+.+.+.|+ +-.+..-++.++ ++.+||+|+|..++.
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-LNDKYDIAICHAFLL 100 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-CSSCEEEEEEESCGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC-cCCCeeEEEECChhh
Confidence 4568999999999999999876 356666655422211112222232 222222222333 468999999999988
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
+..+. +.+|.++-|+|||||++++.+..
T Consensus 101 ~~~~~---~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 101 HMTTP---ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GCSSH---HHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCH---HHHHHHHHHHcCCCCEEEEEecc
Confidence 87653 59999999999999999988654
No 41
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.02 E-value=1.2e-10 Score=101.17 Aligned_cols=99 Identities=10% Similarity=0.020 Sum_probs=69.6
Q ss_pred CceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC--CC-cchhhhhhhhhhc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT--YP-RTYDLLHADHLFS 143 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t--yP-rtyDllH~~~lfs 143 (223)
.-.+|||+|||.|.++..|+++ .|+.+.+++.......+.+.+.|+..-+.-.|..+.. ++ .+||+|.|..++.
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 196 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTM 196 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGG
T ss_pred CCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchh
Confidence 4568999999999999999876 4556666554322233334445664322212223333 44 8999999998888
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+. + ...+|.|+.|+|||||.+++.+
T Consensus 197 ~~-~---~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 197 YV-D---LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp GS-C---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hC-C---HHHHHHHHHHHcCCCcEEEEEE
Confidence 77 3 6799999999999999999974
No 42
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.02 E-value=5.4e-11 Score=101.23 Aligned_cols=99 Identities=16% Similarity=0.158 Sum_probs=68.6
Q ss_pred eEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCccc---ccccccccCCCC-Ccchhhhhhhhhhccc
Q 027471 72 RNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFG---LYHDWCESFNTY-PRTYDLLHADHLFSTI 145 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~---~~~dwce~f~ty-PrtyDllH~~~lfs~~ 145 (223)
.+|||+|||.|.++..|.+.+ |+.+.++|.......+.+.+.|+.. .++.-.+.++.+ +.+||+|.|.+++.+.
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 149 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWV 149 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGC
T ss_pred CEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhcc
Confidence 589999999999999998885 4445554432221222233346522 333223344433 4999999999999887
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
.+. ..+|.|+.|+|||||.+++.+.
T Consensus 150 ~~~---~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 150 ADP---RSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp SCH---HHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCH---HHHHHHHHHHcCCCeEEEEEEe
Confidence 653 6899999999999999999854
No 43
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.02 E-value=4.8e-11 Score=107.55 Aligned_cols=142 Identities=12% Similarity=0.163 Sum_probs=98.2
Q ss_pred chhHhhhhHHHHHhhhhhhcc-C-CCCCCceEEEeeCCchHHHHHHhhCCCeEEEEecCCCCCCChhhHHhhCccccccc
Q 027471 44 DFTADYQHWKNVVSKSYLNGM-G-INWSFVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFGLYHD 121 (223)
Q Consensus 44 ~f~~D~~~W~~~v~~~Y~~~l-~-i~~~~iRnvLDmgaG~GgFAA~L~~~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~d 121 (223)
.+...+..|.+.... +.+.+ . +....-.+|||+|||.|.++.+|.+++..|.-+-+ +++.++.+.++|+......
T Consensus 80 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~--s~~~~~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 80 YHSSGSSVMREHFAM-LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEP--SSGVAAKAREKGIRVRTDF 156 (416)
T ss_dssp CCGGGCHHHHHHHHH-HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECC--CHHHHHHHHTTTCCEECSC
T ss_pred CcCcCCHHHHHHHHH-HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECC--CHHHHHHHHHcCCCcceee
Confidence 345566678777665 54433 1 22334568999999999999999988665444422 1236777888876543321
Q ss_pred c----cccCCCCC-cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccHH--------------------H
Q 027471 122 W----CESFNTYP-RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE--------------------T 176 (223)
Q Consensus 122 w----ce~f~tyP-rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~--------------------~ 176 (223)
+ .+.++ ++ ++||+|.|.++|.+..+ ...+|.|+.|+|||||.+++..+.. .
T Consensus 157 ~~~~~~~~l~-~~~~~fD~I~~~~vl~h~~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s 232 (416)
T 4e2x_A 157 FEKATADDVR-RTEGPANVIYAANTLCHIPY---VQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFS 232 (416)
T ss_dssp CSHHHHHHHH-HHHCCEEEEEEESCGGGCTT---HHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECC
T ss_pred echhhHhhcc-cCCCCEEEEEECChHHhcCC---HHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCC
Confidence 1 11222 33 89999999999999874 5699999999999999999984321 1
Q ss_pred HHHHHHHHHhCCCeeE
Q 027471 177 IVEVEDLVKSLHWDVR 192 (223)
Q Consensus 177 ~~~i~~i~~~l~W~~~ 192 (223)
...+++++++-.++..
T Consensus 233 ~~~l~~ll~~aGf~~~ 248 (416)
T 4e2x_A 233 ATSVQGMAQRCGFELV 248 (416)
T ss_dssp HHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHcCCEEE
Confidence 2578888888888765
No 44
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.01 E-value=5.8e-11 Score=102.17 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=64.0
Q ss_pred EEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCc-----ccccccccccCCCCCcchhhhhhh-hhhcc
Q 027471 73 NVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGL-----FGLYHDWCESFNTYPRTYDLLHAD-HLFST 144 (223)
Q Consensus 73 nvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL-----i~~~~dwce~f~tyPrtyDllH~~-~lfs~ 144 (223)
+|||+|||.|.++..|++++ |+.+.++|.......+.+.+.|+ +-++..-.+.++ ++.+||+|.|. .++.+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~~~~~ 163 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA-LDKRFGTVVISSGSINE 163 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC-CSCCEEEEEECHHHHTT
T ss_pred cEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC-cCCCcCEEEECCccccc
Confidence 79999999999999999884 55566654322212222222232 222322122233 36999998865 44544
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
. +......+|.|+.|+|||||.+++...
T Consensus 164 ~-~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 164 L-DEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp S-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-CHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 3 333457999999999999999999843
No 45
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.01 E-value=2.3e-10 Score=89.81 Aligned_cols=134 Identities=16% Similarity=0.165 Sum_probs=80.1
Q ss_pred CceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcc----cc-cccccccCCCCCcchhhhhhhhhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLF----GL-YHDWCESFNTYPRTYDLLHADHLF 142 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi----~~-~~dwce~f~tyPrtyDllH~~~lf 142 (223)
.-.+|||+|||.|.++..+.+.+ |+.+.+.|.......+.+.+.|+. -+ ..|+.+.++ +.+||+|.|...|
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~ 129 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNPPI 129 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECCCS
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECCCc
Confidence 34689999999999999998763 444554433221122222233543 22 233222211 4799999998766
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEeccHH-HHHHHHHHHHhCCCeeEEeecCCCeeEEEEEe
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRDDAE-TIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 207 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~-~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K 207 (223)
.+.. -....++.++.|+|+|||.+++.+... ....+.+.++..-.++......+.-.++.++|
T Consensus 130 ~~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 130 RAGK--EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp TTCH--HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEETTEEEEEEEC
T ss_pred ccch--hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEecCCcEEEEEEee
Confidence 5421 234689999999999999999986543 34445555555433444433344455555554
No 46
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.01 E-value=3.8e-11 Score=101.30 Aligned_cols=100 Identities=10% Similarity=0.190 Sum_probs=68.3
Q ss_pred CceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCccc--ccccccccCCCCCcchhhhhhhhhhc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
.-.+|||+|||.|.++..|.++ .|+.+.++|.......+...+.|+.. .+..-.+.++.-+.+||+|+|..++.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLE 116 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhh
Confidence 3568999999999999999866 35555554432222222233345532 22221223343348999999999998
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+..+. +.+|.++.|+|||||++++.+
T Consensus 117 ~~~~~---~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 117 HLQSP---EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GCSCH---HHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCH---HHHHHHHHHHcCCCcEEEEEE
Confidence 87653 589999999999999999975
No 47
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.01 E-value=9.2e-11 Score=95.83 Aligned_cols=100 Identities=16% Similarity=0.106 Sum_probs=68.7
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHh----hCccc----ccccccccCCC--CC-cchhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYE----RGLFG----LYHDWCESFNT--YP-RTYDL 135 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~e----RGLi~----~~~dwce~f~t--yP-rtyDl 135 (223)
-.+|||+|||.|.++.+|+++ .|+.+.++|. .++.+.+ .|+.. -+.-.+..+.. ++ .+||+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~----~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 105 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYR----SLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDA 105 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHH----HHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHH----HHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCE
Confidence 458999999999999999875 4666666544 3333333 33321 11111233333 22 79999
Q ss_pred hhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccHH
Q 027471 136 LHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE 175 (223)
Q Consensus 136 lH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~ 175 (223)
|.|..+|.+..+ ..+..+|.++.|+|||||.+++++...
T Consensus 106 v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 106 ATVIEVIEHLDL-SRLGAFERVLFEFAQPKIVIVTTPNIE 144 (217)
T ss_dssp EEEESCGGGCCH-HHHHHHHHHHHTTTCCSEEEEEEEBHH
T ss_pred EeeHHHHHcCCH-HHHHHHHHHHHHHcCCCEEEEEccCcc
Confidence 999999988753 345689999999999999998886643
No 48
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.01 E-value=3.5e-10 Score=93.81 Aligned_cols=103 Identities=18% Similarity=0.116 Sum_probs=71.5
Q ss_pred hhccCCCCCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCc-ccccccccccCCCCCcchhh
Q 027471 61 LNGMGINWSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNTYPRTYDL 135 (223)
Q Consensus 61 ~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~tyPrtyDl 135 (223)
++.+++. .-.+|||+|||.|.++..|.++ .|+.+.++|. .++.+.++.- +-.++.-.+.++ .+.+||+
T Consensus 26 ~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~----~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~ 98 (259)
T 2p35_A 26 LAQVPLE--RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDD----MLEKAADRLPNTNFGKADLATWK-PAQKADL 98 (259)
T ss_dssp HTTCCCS--CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHH----HHHHHHHHSTTSEEEECCTTTCC-CSSCEEE
T ss_pred HHhcCCC--CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHH----HHHHHHHhCCCcEEEECChhhcC-ccCCcCE
Confidence 3444433 3458999999999999998765 5676766543 4555555511 112222123344 3489999
Q ss_pred hhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 136 LHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 136 lH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
|+|..++.+..+ ...+|.|+.|+|||||.+++...
T Consensus 99 v~~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 99 LYANAVFQWVPD---HLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEEESCGGGSTT---HHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEEeCchhhCCC---HHHHHHHHHHhcCCCeEEEEEeC
Confidence 999988887754 46899999999999999999853
No 49
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.01 E-value=1.8e-10 Score=92.92 Aligned_cols=98 Identities=15% Similarity=0.158 Sum_probs=67.8
Q ss_pred CCceEEEeeCCchHHHHHHhhCCCe--EEEEecCCCCCCChhhHHhhCcccccccccccCCCCC-cchhhhhhhhhhccc
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDLKV--WVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTI 145 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~~V--~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP-rtyDllH~~~lfs~~ 145 (223)
..-.+|||+|||.|.++.+|.+++. +.+.+++. .++.+.++..--...|.++....++ .+||+|.|.+++.+.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~ 106 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPE----AAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHL 106 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHH----HHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHH----HHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhc
Confidence 3456899999999999999998853 33443322 4444444432112233222112355 899999999999887
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
.+. ..+|.++.|+|+|||.+++..+
T Consensus 107 ~~~---~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 107 FDP---WAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp SCH---HHHHHHTGGGEEEEEEEEEEEE
T ss_pred CCH---HHHHHHHHHHcCCCCEEEEEeC
Confidence 653 5899999999999999999853
No 50
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.00 E-value=6.7e-11 Score=97.21 Aligned_cols=115 Identities=17% Similarity=0.097 Sum_probs=79.4
Q ss_pred ceEEEeeCCchHHHHHHhhCCCe--EEEEecCCCCCCChhhHHhhCccc---ccccccccCCCCCcchhhhhhhhhhccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLKV--WVMNVVPIESPDTLPIIYERGLFG---LYHDWCESFNTYPRTYDLLHADHLFSTI 145 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~V--~vmnv~p~~~~~~l~~i~eRGLi~---~~~dwce~f~tyPrtyDllH~~~lfs~~ 145 (223)
-.+|||+|||.|.++.+|.+++. +.+.++| ..++.+.+++... .+..-.+.++.-+.+||+|.|.++|.+.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~----~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGYKAVGVDISE----VMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCH----HHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred CCeEEEEcCCCCHHHHHHHHcCCeEEEEECCH----HHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 35899999999999999998854 4444433 2556666653221 2221122333224899999999999887
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEeccHH----------------------HHHHHHHHHHhCCCeeE
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILRDDAE----------------------TIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~D~~~----------------------~~~~i~~i~~~l~W~~~ 192 (223)
.+. ..+|.++.|+|||||.+++.+... ....++++++...++..
T Consensus 130 ~~~---~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 195 (242)
T 3l8d_A 130 EEP---LRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVV 195 (242)
T ss_dssp SCH---HHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEE
T ss_pred cCH---HHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEE
Confidence 543 589999999999999999984211 12467777888777764
No 51
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.99 E-value=6.1e-10 Score=90.10 Aligned_cols=96 Identities=17% Similarity=0.212 Sum_probs=67.2
Q ss_pred CceEEEeeCCchHHHHHHhhCC-CeEEEEecCCCCCCChhhHHhhC-cccccccccccCCCCCcchhhhhhhhhhccccc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPDTLPIIYERG-LFGLYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~-~V~vmnv~p~~~~~~l~~i~eRG-Li~~~~dwce~f~tyPrtyDllH~~~lfs~~~~ 147 (223)
.-.+|||+|||.|.++..| .. .|+.+.+++. .++.+.++. -+..++.-.+.++.-+++||+|.|.+++.+..+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 110 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVEPSEA----MLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVED 110 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEECCCHH----HHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSC
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEeCCHH----HHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCC
Confidence 4468999999999999999 44 5566555432 455555552 122222212233322379999999998888764
Q ss_pred ccchhHHHHhhhhcccCCcEEEEecc
Q 027471 148 RCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 148 rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
...+|.|+.|+|||||.+++.+.
T Consensus 111 ---~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 111 ---VERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---HHHHHHHHHHHcCCCCEEEEEec
Confidence 46899999999999999999854
No 52
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.99 E-value=1.1e-10 Score=96.12 Aligned_cols=125 Identities=10% Similarity=0.131 Sum_probs=79.9
Q ss_pred hhhccCCCCCCceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhh-Cc--------------ccccccc
Q 027471 60 YLNGMGINWSFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYER-GL--------------FGLYHDW 122 (223)
Q Consensus 60 Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eR-GL--------------i~~~~dw 122 (223)
|++.+++..+ .+|||+|||.|.++.+|++++ |+.+.+++. .++.+.++ ++ ..-+.=.
T Consensus 14 ~~~~l~~~~~--~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~----~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~ 87 (203)
T 1pjz_A 14 YWSSLNVVPG--ARVLVPLCGKSQDMSWLSGQGYHVVGAELSEA----AVERYFTERGEQPHITSQGDFKVYAAPGIEIW 87 (203)
T ss_dssp HHHHHCCCTT--CEEEETTTCCSHHHHHHHHHCCEEEEEEECHH----HHHHHHHHHCSCSEEEEETTEEEEECSSSEEE
T ss_pred HHHhcccCCC--CEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHH----HHHHHHHHccCCcccccccccccccCCccEEE
Confidence 5555555443 579999999999999998875 666666655 44555444 11 0111112
Q ss_pred cccCCCCC----cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcE-EEEe-ccHH----------HHHHHHHHHHh
Q 027471 123 CESFNTYP----RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGN-LILR-DDAE----------TIVEVEDLVKS 186 (223)
Q Consensus 123 ce~f~tyP----rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~-~ii~-D~~~----------~~~~i~~i~~~ 186 (223)
|..+...| .+||+|-|..+|.+... .....++.|+.|+|||||. ++++ +..+ ..++++.++..
T Consensus 88 ~~d~~~l~~~~~~~fD~v~~~~~l~~l~~-~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~ 166 (203)
T 1pjz_A 88 CGDFFALTARDIGHCAAFYDRAAMIALPA-DMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG 166 (203)
T ss_dssp EECCSSSTHHHHHSEEEEEEESCGGGSCH-HHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS
T ss_pred ECccccCCcccCCCEEEEEECcchhhCCH-HHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC
Confidence 34444444 68999998877776542 3345789999999999998 3333 2110 24567777666
Q ss_pred CCCeeE
Q 027471 187 LHWDVR 192 (223)
Q Consensus 187 l~W~~~ 192 (223)
.|++.
T Consensus 167 -gf~i~ 171 (203)
T 1pjz_A 167 -NWEVT 171 (203)
T ss_dssp -SEEEE
T ss_pred -CcEEE
Confidence 67654
No 53
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.98 E-value=3.5e-10 Score=93.76 Aligned_cols=93 Identities=17% Similarity=0.201 Sum_probs=65.9
Q ss_pred CceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhh---Cc--cc-ccccccccCCCCC-cchhhhhhhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYER---GL--FG-LYHDWCESFNTYP-RTYDLLHADH 140 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eR---GL--i~-~~~dwce~f~tyP-rtyDllH~~~ 140 (223)
.-.+|||+|||.|.++..|.+++ |+.+.++|. .++.+.++ +. +- ...|. +.++ ++ .+||+|+|..
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGYRYIALDADAA----MLEVFRQKIAGVDRKVQVVQADA-RAIP-LPDESVHGVIVVH 112 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHH----HHHHHHHHTTTSCTTEEEEESCT-TSCC-SCTTCEEEEEEES
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHH----HHHHHHHHhhccCCceEEEEccc-ccCC-CCCCCeeEEEECC
Confidence 34689999999999999999885 444444332 44444444 11 11 22222 2333 44 8999999998
Q ss_pred hhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 141 LFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 141 lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
+|.+..+ ...++.|+.|+|||||.+++.
T Consensus 113 ~l~~~~~---~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 113 LWHLVPD---WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CGGGCTT---HHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcCC---HHHHHHHHHHHCCCCcEEEEE
Confidence 8887764 468999999999999999986
No 54
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.97 E-value=2.3e-10 Score=94.47 Aligned_cols=128 Identities=13% Similarity=0.143 Sum_probs=75.0
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcccccccccccCCC-------CC----cchhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT-------YP----RTYDLLH 137 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t-------yP----rtyDllH 137 (223)
-.+|||+|||+|+++.+|++++ |+.+.+.|..... |+--+..|..+ .++ ++ .+||+|-
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~~--------~v~~~~~D~~~-~~~~~~~~~~~~~~~~~~~D~Vl 96 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEIA--------GVRFIRCDIFK-ETIFDDIDRALREEGIEKVDDVV 96 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCCT--------TCEEEECCTTS-SSHHHHHHHHHHHHTCSSEEEEE
T ss_pred CCEEEEEeecCCHHHHHHHHcCCcEEEEeccccccCC--------CeEEEEccccC-HHHHHHHHHHhhcccCCcceEEe
Confidence 4689999999999999999874 6667777753221 22112222111 111 11 4899988
Q ss_pred hhhhhcc--------cccccchhHHHHhhhhcccCCcEEEEecc-HHHHHHHHHHHHhCCCeeE-Ee-e----cCCCeeE
Q 027471 138 ADHLFST--------IKKRCSLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKSLHWDVR-MI-Y----TNDNQGM 202 (223)
Q Consensus 138 ~~~lfs~--------~~~rC~i~~vl~E~DRILRPgG~~ii~D~-~~~~~~i~~i~~~l~W~~~-~~-~----~~~~e~~ 202 (223)
|+..... .......+.++.++-|+|||||.|++.-- .+....+...++.. +... .. . .++.|.+
T Consensus 97 sd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y 175 (191)
T 3dou_A 97 SDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN-FSSYKISKPPASRGSSSEIY 175 (191)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG-EEEEEEECC------CCEEE
T ss_pred cCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh-cCEEEEECCCCccCCCceEE
Confidence 7643221 11112235788999999999999998522 22233444444442 3322 21 1 2468999
Q ss_pred EEEEec
Q 027471 203 LCVHKT 208 (223)
Q Consensus 203 L~~~K~ 208 (223)
++|++.
T Consensus 176 ~v~~~~ 181 (191)
T 3dou_A 176 IMFFGF 181 (191)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 999873
No 55
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.97 E-value=2.6e-10 Score=91.60 Aligned_cols=137 Identities=15% Similarity=0.145 Sum_probs=83.5
Q ss_pred eEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCc---ccccccccccCCC-CCcchhhhhhhhhh
Q 027471 72 RNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGL---FGLYHDWCESFNT-YPRTYDLLHADHLF 142 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGL---i~~~~dwce~f~t-yPrtyDllH~~~lf 142 (223)
.+|||+|||.|.++.+|+++ .|+.+.+.|.......+.+.+.|+ +-+++.-.+.++. .+.+||+|-+...|
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGY 103 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESB
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCc
Confidence 48999999999999988765 466666544322223333444465 2233322233443 44899999887544
Q ss_pred cccc------cccchhHHHHhhhhcccCCcEEEEecc------HHHHHHHHHHHHhCC---CeeEEee---c-CCCeeEE
Q 027471 143 STIK------KRCSLKAVVAEVDRILRPDGNLILRDD------AETIVEVEDLVKSLH---WDVRMIY---T-NDNQGML 203 (223)
Q Consensus 143 s~~~------~rC~i~~vl~E~DRILRPgG~~ii~D~------~~~~~~i~~i~~~l~---W~~~~~~---~-~~~e~~L 203 (223)
-... ..-....++.++-|+|||||.+++.+- .+....+.+.++.+. |.+.... . +....++
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp~~~ 183 (197)
T 3eey_A 104 LPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPILV 183 (197)
T ss_dssp CTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCCEEE
T ss_pred ccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCCeEE
Confidence 1100 111224699999999999999998742 224566677776665 6665332 1 2355677
Q ss_pred EEEec
Q 027471 204 CVHKT 208 (223)
Q Consensus 204 ~~~K~ 208 (223)
+.+|.
T Consensus 184 ~~~~~ 188 (197)
T 3eey_A 184 CIEKI 188 (197)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 77764
No 56
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.97 E-value=5.6e-10 Score=94.87 Aligned_cols=95 Identities=13% Similarity=0.158 Sum_probs=67.7
Q ss_pred CCceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhC--cccccccccccCCCCCcchhhhhhhhhhcc
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERG--LFGLYHDWCESFNTYPRTYDLLHADHLFST 144 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRG--Li~~~~dwce~f~tyPrtyDllH~~~lfs~ 144 (223)
..-.+|||+|||.|.++..|.+.+ |+.+.++|. .++.+.++. +--...|. +.++ ++.+||+|+|..++.+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~----~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~ 129 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAAT----MIEKARQNYPHLHFDVADA-RNFR-VDKPLDAVFSNAMLHW 129 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHH----HHHHHHHHCTTSCEEECCT-TTCC-CSSCEEEEEEESCGGG
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHH----HHHHHHhhCCCCEEEECCh-hhCC-cCCCcCEEEEcchhhh
Confidence 345689999999999999998764 445555433 455555442 21122222 2343 4689999999988887
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEec
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
..+ .+.+|.|+.|+|||||++++..
T Consensus 130 ~~d---~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 130 VKE---PEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp CSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcC---HHHHHHHHHHhcCCCcEEEEEe
Confidence 664 4689999999999999999973
No 57
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=2.2e-10 Score=96.90 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=65.7
Q ss_pred CceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhccccc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~~ 147 (223)
.-.+|||+|||+|.++..|.+.+ |+.+.++|. .++.+.++.-+-.++.-++.++.-+++||+|||.+++.+..+
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~----~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 109 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALANQGLFVYAVEPSIV----MRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFSH 109 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHH----HHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSS
T ss_pred CCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHH----HHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhccC
Confidence 34689999999999999999875 444555442 222222222222333323445533499999999999988754
Q ss_pred ccchhHHHHhhhhcccCCcEEEEec
Q 027471 148 RCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 148 rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
...+|.|+.|+|| ||++++.+
T Consensus 110 ---~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 110 ---LEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp ---HHHHHHHHHHHBC-SSCEEEEE
T ss_pred ---HHHHHHHHHHHhC-CcEEEEEE
Confidence 4699999999999 99777763
No 58
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.96 E-value=2.6e-10 Score=92.51 Aligned_cols=115 Identities=15% Similarity=0.096 Sum_probs=82.1
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhh-CcccccccccccCCCCCcchhhhhhhhhhccccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYER-GLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKK 147 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eR-GLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~~ 147 (223)
-.+|||+|||.|.++..|++++ |+.+.++|. .++.+.++ ++--...|. +.++ .+.+||+|.|..++.+...
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGFDVDATDGSPE----LAAEASRRLGRPVRTMLF-HQLD-AIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHTSCCEECCG-GGCC-CCSCEEEEEECSCGGGSCH
T ss_pred CCcEEEECCCCCHHHHHHHHcCCeEEEECCCHH----HHHHHHHhcCCceEEeee-ccCC-CCCcEEEEEecCchhhcCH
Confidence 4589999999999999999885 444444332 55555555 433233332 2334 4499999999998888762
Q ss_pred ccchhHHHHhhhhcccCCcEEEEeccH---------------HHHHHHHHHHHhCC-CeeE
Q 027471 148 RCSLKAVVAEVDRILRPDGNLILRDDA---------------ETIVEVEDLVKSLH-WDVR 192 (223)
Q Consensus 148 rC~i~~vl~E~DRILRPgG~~ii~D~~---------------~~~~~i~~i~~~l~-W~~~ 192 (223)
-....+|.|+.|+|||||.+++.... -..+.+.++++.-. ++..
T Consensus 118 -~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 118 -DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp -HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred -HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 23568999999999999999998321 13577888888887 8765
No 59
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.96 E-value=1.5e-10 Score=98.34 Aligned_cols=99 Identities=12% Similarity=0.194 Sum_probs=68.2
Q ss_pred ceEEEeeCCchHHHHHHhhCCCe--EEEEecCCCCCCChhhHHhh----Cccc-------ccccccccCC---CCCcchh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLKV--WVMNVVPIESPDTLPIIYER----GLFG-------LYHDWCESFN---TYPRTYD 134 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~V--~vmnv~p~~~~~~l~~i~eR----GLi~-------~~~dwce~f~---tyPrtyD 134 (223)
-.+|||+|||+|.++..|++.+. +.+.++|. .++.+.++ +... ...|+. .++ .-+.+||
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~----~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD 132 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEEGFSVTSVDASDK----MLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGFD 132 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCEE
T ss_pred CCEEEEecCCCCHHHHHHHHCCCeEEEEECCHH----HHHHHHHhhhhcccccccceeeEeecChh-hCccccccCCCeE
Confidence 46899999999999999998854 44555443 44444332 2211 112211 122 2238999
Q ss_pred hhhhh-hhhccccc----ccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 135 LLHAD-HLFSTIKK----RCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 135 llH~~-~lfs~~~~----rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
+|+|. .+|.+..+ .-....+|.|+.|+|||||++++....
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 99997 78888776 344569999999999999999998543
No 60
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.96 E-value=3.6e-10 Score=97.21 Aligned_cols=93 Identities=10% Similarity=0.085 Sum_probs=64.8
Q ss_pred CceEEEeeCCchHHHHHHhh---CC--CeEEEEecCCCCCCChhhHHhh-----Cccc---ccccccccCCCCC------
Q 027471 70 FVRNVMDMRAVYGGFAAALK---DL--KVWVMNVVPIESPDTLPIIYER-----GLFG---LYHDWCESFNTYP------ 130 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~---~~--~V~vmnv~p~~~~~~l~~i~eR-----GLi~---~~~dwce~f~tyP------ 130 (223)
.-.+|||+|||.|.++..|+ .. .|+.+.++|. .++.+.++ |... .++.-.+.++.-+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~----~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 111 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSAT----MIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDK 111 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHH----HHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHH----HHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccC
Confidence 46789999999999999998 44 4555666544 34444333 3322 2222122233222
Q ss_pred cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEE
Q 027471 131 RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLIL 170 (223)
Q Consensus 131 rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii 170 (223)
++||+|+|..++++. ....+|.|+.|+|||||.+++
T Consensus 112 ~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 112 QKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 699999999988877 457999999999999999998
No 61
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.96 E-value=4.3e-10 Score=93.64 Aligned_cols=97 Identities=13% Similarity=0.181 Sum_probs=69.1
Q ss_pred CceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCc---ccccccccccCCCCCcchhhhhhhhhhc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGL---FGLYHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGL---i~~~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
.-.+|||+|||.|.++..|++++ |+.+.++|. .++.+.++.- +-.+..-.+.++.-+.+||+|.|..+|.
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 119 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSER----MLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALH 119 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHH----HHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHH----HHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhh
Confidence 45789999999999999998874 455555432 5555555532 1222211223442348999999999998
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
+..+ ...+|.|+.|+|||||.++++..
T Consensus 120 ~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 120 YIAS---FDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp GCSC---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhh---HHHHHHHHHHHcCCCcEEEEEeC
Confidence 8754 46999999999999999999743
No 62
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.96 E-value=2e-10 Score=95.30 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=76.4
Q ss_pred CCceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhh----C---------------------------
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYER----G--------------------------- 114 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eR----G--------------------------- 114 (223)
..-.+|||+|||.|.++..|++++ |+.+.++|. .++.+.++ +
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~----~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQ----NLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHH----HHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHH----HHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 346789999999999999988774 444554433 23322221 1
Q ss_pred ----cc-c-ccccccccCCCCC---cchhhhhhhhhhccccc-ccchhHHHHhhhhcccCCcEEEEeccHH---------
Q 027471 115 ----LF-G-LYHDWCESFNTYP---RTYDLLHADHLFSTIKK-RCSLKAVVAEVDRILRPDGNLILRDDAE--------- 175 (223)
Q Consensus 115 ----Li-~-~~~dwce~f~tyP---rtyDllH~~~lfs~~~~-rC~i~~vl~E~DRILRPgG~~ii~D~~~--------- 175 (223)
-+ . ...|..+..+.-+ .+||+|.|..++++... .-....+|.++-|+|||||++++.+...
T Consensus 131 ~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 210 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQ 210 (265)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTE
T ss_pred HhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCc
Confidence 02 2 2222222111123 79999999888874322 1234589999999999999999985221
Q ss_pred -------HHHHHHHHHHhCCCeeE
Q 027471 176 -------TIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 176 -------~~~~i~~i~~~l~W~~~ 192 (223)
..+.+.++++...++..
T Consensus 211 ~~~~~~~~~~~~~~~l~~aGf~~~ 234 (265)
T 2i62_A 211 KFSSLPLGWETVRDAVEEAGYTIE 234 (265)
T ss_dssp EEECCCCCHHHHHHHHHHTTCEEE
T ss_pred cccccccCHHHHHHHHHHCCCEEE
Confidence 23478888888888765
No 63
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.95 E-value=1.5e-09 Score=90.90 Aligned_cols=135 Identities=16% Similarity=0.198 Sum_probs=85.1
Q ss_pred ceEEEeeCCchHHHHHHhh--CC--CeEEEEecCCCCCCChhhHHhhCc--ccccccccccCCC---CCcchhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALK--DL--KVWVMNVVPIESPDTLPIIYERGL--FGLYHDWCESFNT---YPRTYDLLHADHL 141 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~--~~--~V~vmnv~p~~~~~~l~~i~eRGL--i~~~~dwce~f~t---yPrtyDllH~~~l 141 (223)
-.+|||+|||.|.++..|+ .. .|+.+.+++.......+.+...|+ +-+++.-.+.++. .+.+||+|.|..+
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~ 150 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAV 150 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEecc
Confidence 4689999999999888887 33 466666655322212233334466 3334322233432 2578999998642
Q ss_pred hcccccccchhHHHHhhhhcccCCcEEEEecc---HHHHHHHHHHHHhCCCeeEEee----c--CCCeeEEEEEecccCC
Q 027471 142 FSTIKKRCSLKAVVAEVDRILRPDGNLILRDD---AETIVEVEDLVKSLHWDVRMIY----T--NDNQGMLCVHKTYWRP 212 (223)
Q Consensus 142 fs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~---~~~~~~i~~i~~~l~W~~~~~~----~--~~~e~~L~~~K~~w~~ 212 (223)
..+..++.++.|+|||||.+++.+. .+.+..+.+.++...+...... . .....+++++|.-..|
T Consensus 151 -------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~~~~~ 223 (240)
T 1xdz_A 151 -------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTP 223 (240)
T ss_dssp -------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred -------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEecCCCC
Confidence 3467999999999999999999753 3345566667777777764221 1 2334566777764443
No 64
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.95 E-value=5.1e-10 Score=97.97 Aligned_cols=139 Identities=15% Similarity=0.197 Sum_probs=89.1
Q ss_pred CCCCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcccccccccccC-CCCCcchhhhhhhh
Q 027471 66 INWSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESF-NTYPRTYDLLHADH 140 (223)
Q Consensus 66 i~~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f-~tyPrtyDllH~~~ 140 (223)
+++....+|||+|||.|.++..|.++ .++++.+ |.......+.+.+.|+-.-+.--+..| ..+|..||++.|.+
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~ 243 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSA 243 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEES
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEeh
Confidence 34556789999999999999999764 3555555 432222333344456633121111233 44666899999999
Q ss_pred hhcccccccchhHHHHhhhhcccCCcEEEEeccHH----------------------HHHHHHHHHHhCCCeeEEee-cC
Q 027471 141 LFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE----------------------TIVEVEDLVKSLHWDVRMIY-TN 197 (223)
Q Consensus 141 lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~----------------------~~~~i~~i~~~l~W~~~~~~-~~ 197 (223)
+++++.+. ....+|.++-|+|||||++++.|... ..++++++++.--++..... ..
T Consensus 244 vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 322 (332)
T 3i53_A 244 VLHDWDDL-SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPIS 322 (332)
T ss_dssp CGGGSCHH-HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECS
T ss_pred hhccCCHH-HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 99988763 23689999999999999999975410 12456666666666654222 22
Q ss_pred CCeeEEEEEe
Q 027471 198 DNQGMLCVHK 207 (223)
Q Consensus 198 ~~e~~L~~~K 207 (223)
. ..++.|+|
T Consensus 323 ~-~~vie~r~ 331 (332)
T 3i53_A 323 Y-VSIVEMTA 331 (332)
T ss_dssp S-SEEEEEEE
T ss_pred C-cEEEEEee
Confidence 3 56666665
No 65
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.94 E-value=7e-11 Score=97.12 Aligned_cols=98 Identities=17% Similarity=0.171 Sum_probs=67.2
Q ss_pred CceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCc-ccccccccccCCCCC--cchhhhhhhhhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNTYP--RTYDLLHADHLF 142 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~tyP--rtyDllH~~~lf 142 (223)
.-.+|||+|||.|.++..|++. .|+.+.++|. .++.+.++-- .+-+.-.|..+..+| .+||+|.|..++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEK----MLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSI 119 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHH----HHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHH----HHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCcc
Confidence 3478999999999999999876 4555666443 3444443310 001111223444433 899999999999
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
.+..+. ....+|.|+.|+|||||.+++.+
T Consensus 120 ~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 120 HHLEDE-DKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GGSCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCHH-HHHHHHHHHHHhcCCCcEEEEEE
Confidence 888542 23469999999999999999985
No 66
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.94 E-value=2.1e-09 Score=84.38 Aligned_cols=130 Identities=11% Similarity=0.145 Sum_probs=84.2
Q ss_pred ceEEEeeCCchHHHHHHhhCCCe--EEEEecCCCCCCChhhHHhhCc-ccccccccccCCC--CC-cchhhhhhh-hhhc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLKV--WVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNT--YP-RTYDLLHAD-HLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~V--~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~t--yP-rtyDllH~~-~lfs 143 (223)
-.+|||+|||.|.++..|.+.+. +.+.+.|. .++.+.++.- +..++ ..+.. ++ .+||+|.|. .+++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~----~~~~a~~~~~~~~~~~---~d~~~~~~~~~~~D~i~~~~~~~~ 119 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPI----LIDYAKQDFPEARWVV---GDLSVDQISETDFDLIVSAGNVMG 119 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEESCHH----HHHHHHHHCTTSEEEE---CCTTTSCCCCCCEEEEEECCCCGG
T ss_pred CCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHH----HHHHHHHhCCCCcEEE---cccccCCCCCCceeEEEECCcHHh
Confidence 45899999999999999988754 44444332 3444443321 22222 22322 33 899999997 6676
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEeccHH---HHHHHHHHHHhCCCeeEEeec---------CCCeeEEEEEec
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRDDAE---TIVEVEDLVKSLHWDVRMIYT---------NDNQGMLCVHKT 208 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~---~~~~i~~i~~~l~W~~~~~~~---------~~~e~~L~~~K~ 208 (223)
+... -....+|.++.|+|+|||.+++..... ....+.++++...++...... ...-.+++++|+
T Consensus 120 ~~~~-~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 120 FLAE-DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp GSCH-HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred hcCh-HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 6532 234689999999999999999975433 356777888877777653321 124556677763
No 67
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.94 E-value=4.8e-10 Score=93.12 Aligned_cols=119 Identities=15% Similarity=0.181 Sum_probs=81.1
Q ss_pred CceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCc------ccccccccccCCCCCcchhhhhhhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGL------FGLYHDWCESFNTYPRTYDLLHADH 140 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGL------i~~~~dwce~f~tyPrtyDllH~~~ 140 (223)
.-.+|||+|||.|.++..|+++ .|+.+.++|. .++.+.++.- +-.+..-.+.++.-+.+||+|.|..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITED----FLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHH----HHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHH----HHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcc
Confidence 3578999999999999999877 4556665443 3333333321 1122211222332336899999998
Q ss_pred hhcccccccchhHHHHhhhhcccCCcEEEEeccHH---------------HHHHHHHHHHhCCCeeEE
Q 027471 141 LFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE---------------TIVEVEDLVKSLHWDVRM 193 (223)
Q Consensus 141 lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~---------------~~~~i~~i~~~l~W~~~~ 193 (223)
++.+..+. .+..+|.|+.|+|||||.+++.+... ....+.++++...++...
T Consensus 155 ~l~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 221 (241)
T 2ex4_A 155 VIGHLTDQ-HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLA 221 (241)
T ss_dssp CGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEE
T ss_pred hhhhCCHH-HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEE
Confidence 88887652 24589999999999999999976421 356788888888887653
No 68
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.92 E-value=2.2e-10 Score=101.20 Aligned_cols=104 Identities=6% Similarity=-0.025 Sum_probs=64.1
Q ss_pred ceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcc--------ccccccc------ccCC-CCC-c
Q 027471 71 VRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLF--------GLYHDWC------ESFN-TYP-R 131 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi--------~~~~dwc------e~f~-tyP-r 131 (223)
-.+|||+|||.|+....+... .|+.+.+++..-....+...+.|+- ......+ +.++ .+| +
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~ 128 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFG 128 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 467999999999866655433 3666777655322222222223421 0111111 2332 245 8
Q ss_pred chhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 132 TYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 132 tyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
+||+|-|..+++..-+.-....+|.|+.|+|||||+|+++...
T Consensus 129 ~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 129 KFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp CEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999999877654322123469999999999999999998654
No 69
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.92 E-value=1.6e-09 Score=84.49 Aligned_cols=112 Identities=9% Similarity=0.096 Sum_probs=76.4
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCccc---ccccccccCCCCC-cchhhhhhhhhhcc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFG---LYHDWCESFNTYP-RTYDLLHADHLFST 144 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~---~~~dwce~f~tyP-rtyDllH~~~lfs~ 144 (223)
-.+|||+|||.|.++..|.+.+ |+.+.+.|.......+.+.+.|+.. ...|+.+ .+| .+||+|.|...
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~~~~~~~D~i~~~~~--- 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED---VLDKLEFNKAFIGGT--- 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH---HGGGCCCSEEEECSC---
T ss_pred CCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc---cccCCCCcEEEECCc---
Confidence 3589999999999999998864 4555554432221222233335422 2233322 244 68999999855
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEec-cHHHHHHHHHHHHhCCCeeEEe
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRD-DAETIVEVEDLVKSLHWDVRMI 194 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D-~~~~~~~i~~i~~~l~W~~~~~ 194 (223)
.....++.++.|+ |||.+++.+ ..+...++.+.++...|++...
T Consensus 110 ----~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 ----KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ----SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ----ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 3467899999999 999999987 5556778888888888887643
No 70
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.92 E-value=4.7e-09 Score=93.88 Aligned_cols=134 Identities=13% Similarity=0.163 Sum_probs=85.5
Q ss_pred hhccCCCCCCceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhh--Cccc----ccccccccCCCCC-
Q 027471 61 LNGMGINWSFVRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYER--GLFG----LYHDWCESFNTYP- 130 (223)
Q Consensus 61 ~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eR--GLi~----~~~dwce~f~tyP- 130 (223)
++.+++.. .-++|||+|||+|+|+..|++++ |+.+.+++.+ +.....+ .+.. -+... ....+|
T Consensus 77 l~~~~~~~-~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~m----L~~a~r~~~rv~~~~~~ni~~l--~~~~l~~ 149 (291)
T 3hp7_A 77 LAVFNLSV-EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQ----LVWKLRQDDRVRSMEQYNFRYA--EPVDFTE 149 (291)
T ss_dssp HHHTTCCC-TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSC----SCHHHHTCTTEEEECSCCGGGC--CGGGCTT
T ss_pred HHhcCCCc-cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHH----HHHHHHhCcccceecccCceec--chhhCCC
Confidence 34444433 35689999999999999998774 6777776653 3332221 1110 01110 112245
Q ss_pred cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH----------------------HHHHHHHHHHHhCC
Q 027471 131 RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA----------------------ETIVEVEDLVKSLH 188 (223)
Q Consensus 131 rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~----------------------~~~~~i~~i~~~l~ 188 (223)
.+||++-|+..|.. +..+|-|+.|+|||||.+++...+ ...+++..++...-
T Consensus 150 ~~fD~v~~d~sf~s------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~G 223 (291)
T 3hp7_A 150 GLPSFASIDVSFIS------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYG 223 (291)
T ss_dssp CCCSEEEECCSSSC------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEeeHhh------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCC
Confidence 56999999877763 368999999999999999886111 13467778888899
Q ss_pred CeeEEee-c------CCCeeEEEEEe
Q 027471 189 WDVRMIY-T------NDNQGMLCVHK 207 (223)
Q Consensus 189 W~~~~~~-~------~~~e~~L~~~K 207 (223)
|.+.... + .+.|=++.++|
T Consensus 224 f~v~~~~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 224 FSVKGLDFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp EEEEEEEECSSCCGGGCCCEEEEEEE
T ss_pred CEEEEEEECCCCCCCcCHHHHHHhhh
Confidence 9876332 2 24566666666
No 71
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.92 E-value=1.2e-09 Score=87.75 Aligned_cols=126 Identities=9% Similarity=0.167 Sum_probs=74.2
Q ss_pred eEEEeeCCchHHHHHHhhCC------CeEEEEecCCCCCCChhhHHhhCcccccccccccCC------------------
Q 027471 72 RNVMDMRAVYGGFAAALKDL------KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFN------------------ 127 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~------~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~------------------ 127 (223)
.+|||+|||.|+++.+|+++ .|+.+.++|..... ++.-+..|.. .+.
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~--------~v~~~~~d~~-~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIP--------NVYFIQGEIG-KDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCT--------TCEEEECCTT-TTSSCCC-----------CHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCC--------CceEEEcccc-chhhhhhccccccccccchhh
Confidence 68999999999999998754 37778887742211 1111112221 111
Q ss_pred ------CCC-cchhhhhhhhhhcccc----cc----cchhHHHHhhhhcccCCcEEEEeccH-HHHHHHHHHHHhCCCee
Q 027471 128 ------TYP-RTYDLLHADHLFSTIK----KR----CSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDV 191 (223)
Q Consensus 128 ------tyP-rtyDllH~~~lfs~~~----~r----C~i~~vl~E~DRILRPgG~~ii~D~~-~~~~~i~~i~~~l~W~~ 191 (223)
.++ .+||+|.|+..++... +. -....++.++-|+|||||.+++.... +....+...++.. +..
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~-f~~ 173 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGM-FQL 173 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTT-EEE
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHH-Hhe
Confidence 034 7899999876554321 10 01125889999999999999996322 2233444444443 332
Q ss_pred -EEe-e----cCCCeeEEEEEe
Q 027471 192 -RMI-Y----TNDNQGMLCVHK 207 (223)
Q Consensus 192 -~~~-~----~~~~e~~L~~~K 207 (223)
... . ..+.|.+++|++
T Consensus 174 v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 174 VHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp EEECCCC-----CCEEEEEEEE
T ss_pred EEEECCcccCCcCceEEEEEec
Confidence 221 1 235799999987
No 72
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.91 E-value=8.5e-10 Score=90.41 Aligned_cols=97 Identities=12% Similarity=0.193 Sum_probs=67.5
Q ss_pred CceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCc---ccccccccccCCCCCcchhhhhhhhhhc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGL---FGLYHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGL---i~~~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
.-.+|||+|||.|.++..|.+++ |+.+.+++. .++.+.++.- +..++.-.+.++.-+.+||+|.|..++.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 118 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEK----MLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALH 118 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHH----HHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHH----HHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccc
Confidence 34689999999999999998774 444544332 4444444432 2222221223332248999999998888
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
+..+ ...+|.++-|+|||||.+++.+.
T Consensus 119 ~~~~---~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 119 YVED---VARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp GCSC---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccch---HHHHHHHHHHhcCcCcEEEEEeC
Confidence 7754 46899999999999999999754
No 73
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.91 E-value=1.8e-09 Score=91.94 Aligned_cols=123 Identities=14% Similarity=0.093 Sum_probs=75.1
Q ss_pred CceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCC-------------C---ChhhHHh---------------hCc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESP-------------D---TLPIIYE---------------RGL 115 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~-------------~---~l~~i~e---------------RGL 115 (223)
.-.+|||+|||+|.++..++..+ |+.+.++|..-. + ....+.+ |.-
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 45789999999998888776664 666777653111 0 0000000 000
Q ss_pred c--cccccccc--cCCCC-Ccchhhhhhhhhhccc-ccccchhHHHHhhhhcccCCcEEEEeccHH--------------
Q 027471 116 F--GLYHDWCE--SFNTY-PRTYDLLHADHLFSTI-KKRCSLKAVVAEVDRILRPDGNLILRDDAE-------------- 175 (223)
Q Consensus 116 i--~~~~dwce--~f~ty-PrtyDllH~~~lfs~~-~~rC~i~~vl~E~DRILRPgG~~ii~D~~~-------------- 175 (223)
+ -...|-.+ .|+.. ..+||+|.|..++++. .+.-.+..+|.++.|+|||||.|++++...
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~ 214 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCV 214 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeecc
Confidence 1 01222222 12222 3689999999888874 333345689999999999999999995211
Q ss_pred --HHHHHHHHHHhCCCeeE
Q 027471 176 --TIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 176 --~~~~i~~i~~~l~W~~~ 192 (223)
..+.+.+++..--.+..
T Consensus 215 ~~~~~~l~~~l~~aGF~i~ 233 (263)
T 2a14_A 215 ALEKGEVEQAVLDAGFDIE 233 (263)
T ss_dssp CCCHHHHHHHHHHTTEEEE
T ss_pred ccCHHHHHHHHHHCCCEEE
Confidence 24567777776666553
No 74
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.91 E-value=5.5e-09 Score=91.08 Aligned_cols=134 Identities=12% Similarity=0.131 Sum_probs=86.1
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCc---cc-ccccccccCCCCCcchhhhhhh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGL---FG-LYHDWCESFNTYPRTYDLLHAD 139 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGL---i~-~~~dwce~f~tyPrtyDllH~~ 139 (223)
... .+|||+|||.|.++..|.++ .++++.+ |.......+.+.+.|+ +- ..+| .+..+|..||++.+.
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~~~~~~D~v~~~ 240 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGD---MLQEVPSNGDIYLLS 240 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESC---TTTCCCSSCSEEEEE
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCC---CCCCCCCCCCEEEEc
Confidence 344 89999999999999999765 4666666 5433222222223343 22 2333 233467889999999
Q ss_pred hhhcccccccchhHHHHhhhhcccCCcEEEEeccH-------H------------------HHHHHHHHHHhCCCeeEE-
Q 027471 140 HLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA-------E------------------TIVEVEDLVKSLHWDVRM- 193 (223)
Q Consensus 140 ~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~-------~------------------~~~~i~~i~~~l~W~~~~- 193 (223)
++++++.+. ....+|.++.|+|||||.+++.|.. . ..++++++++.-.++...
T Consensus 241 ~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 319 (334)
T 2ip2_A 241 RIIGDLDEA-ASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERI 319 (334)
T ss_dssp SCGGGCCHH-HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred hhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEE
Confidence 999888642 2368999999999999999998421 0 123455566666665432
Q ss_pred eecCCCeeEEEEEe
Q 027471 194 IYTNDNQGMLCVHK 207 (223)
Q Consensus 194 ~~~~~~e~~L~~~K 207 (223)
........++.++|
T Consensus 320 ~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 320 VDLPMETRMIVAAR 333 (334)
T ss_dssp EEETTTEEEEEEEE
T ss_pred EECCCCCEEEEEEe
Confidence 22234466777766
No 75
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.90 E-value=5e-10 Score=90.38 Aligned_cols=127 Identities=11% Similarity=0.097 Sum_probs=79.8
Q ss_pred eEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCC--cchhhhhhhhhhccc
Q 027471 72 RNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP--RTYDLLHADHLFSTI 145 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP--rtyDllH~~~lfs~~ 145 (223)
.+|||+|||.|.++..|+.. .|+.+.++|.......+.+...|+.. +.-.+..+..++ .+||+|.|..+
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~D~i~~~~~---- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPSEPPFDGVISRAF---- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCCCSCEEEEECSCS----
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCccCCcCEEEEecc----
Confidence 58999999999999888753 46666665442221222233346532 111123443333 78999988532
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeEE----e--ecCCCeeEEEEEec
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRM----I--YTNDNQGMLCVHKT 208 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~~----~--~~~~~e~~L~~~K~ 208 (223)
.....++.++.|+|+|||++++.......+.++.+.+ .|+... . +......+++++|+
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 2356899999999999999999865555556666655 676542 1 12345677777764
No 76
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.90 E-value=1.2e-09 Score=89.62 Aligned_cols=112 Identities=20% Similarity=0.205 Sum_probs=79.0
Q ss_pred ceEEEeeCCchHHHHHHhhCCCeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhcccccccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKKRCS 150 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~~rC~ 150 (223)
-.+|||+|||.|.++..|.++ +.+.+++. .++.+.++++--...| .+.++.-+.+||+|.|..++.+..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~s~~----~~~~a~~~~~~~~~~d-~~~~~~~~~~fD~v~~~~~l~~~~~--- 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEPSER----MAEIARKRGVFVLKGT-AENLPLKDESFDFALMVTTICFVDD--- 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEESCHH----HHHHHHHTTCEEEECB-TTBCCSCTTCEEEEEEESCGGGSSC---
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCCCHH----HHHHHHhcCCEEEEcc-cccCCCCCCCeeEEEEcchHhhccC---
Confidence 458999999999999999988 55555332 5666666654322222 2233322379999999998887754
Q ss_pred hhHHHHhhhhcccCCcEEEEeccHH------------------------HHHHHHHHHHhCCCeeE
Q 027471 151 LKAVVAEVDRILRPDGNLILRDDAE------------------------TIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 151 i~~vl~E~DRILRPgG~~ii~D~~~------------------------~~~~i~~i~~~l~W~~~ 192 (223)
...+|.++.|+|+|||.+++.+... ..+.+.++++...++..
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 3689999999999999999984321 23567777777777754
No 77
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.90 E-value=1.7e-09 Score=88.84 Aligned_cols=137 Identities=14% Similarity=0.045 Sum_probs=86.1
Q ss_pred ceEEEeeCCc-hHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCc-ccccccccccCCCCC-cchhhhhhhhhhcc
Q 027471 71 VRNVMDMRAV-YGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNTYP-RTYDLLHADHLFST 144 (223)
Q Consensus 71 iRnvLDmgaG-~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~tyP-rtyDllH~~~lfs~ 144 (223)
-.+|||+||| .|.++..|++. .|+.+.+.|.......+.+...|+ +-+++.-.+.+..++ .+||+|-|.-.|..
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~ 135 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYD 135 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC-
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCcC
Confidence 3689999999 99999888765 466666655432223333344465 223332112355565 89999998755543
Q ss_pred ccc----------------ccchhHHHHhhhhcccCCcEEEEe--ccHHHHHHHHHHHHhCCCeeEEeecC---CCeeEE
Q 027471 145 IKK----------------RCSLKAVVAEVDRILRPDGNLILR--DDAETIVEVEDLVKSLHWDVRMIYTN---DNQGML 203 (223)
Q Consensus 145 ~~~----------------rC~i~~vl~E~DRILRPgG~~ii~--D~~~~~~~i~~i~~~l~W~~~~~~~~---~~e~~L 203 (223)
..+ ...+..++.++.|+|||||.+++. ........+.+.++...|++...... .--.+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~~~~~~l 215 (230)
T 3evz_A 136 KPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGTRWRHSL 215 (230)
T ss_dssp --------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC-CEEEE
T ss_pred CccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCCeEEEEE
Confidence 221 112368999999999999999985 33456778888888889987644322 234455
Q ss_pred EEEe
Q 027471 204 CVHK 207 (223)
Q Consensus 204 ~~~K 207 (223)
..+|
T Consensus 216 ~f~~ 219 (230)
T 3evz_A 216 IFFK 219 (230)
T ss_dssp EEEC
T ss_pred EEec
Confidence 5554
No 78
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.89 E-value=9.3e-10 Score=92.80 Aligned_cols=98 Identities=20% Similarity=0.278 Sum_probs=67.3
Q ss_pred CceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcccccccccccCCCCC-cchhhhhhhhhhcccc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIK 146 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP-rtyDllH~~~lfs~~~ 146 (223)
.-.+|||+|||.|.++..|.+++ |+.+.++|. .++.+.++.....+..-.+.++ ++ .+||+|.|.+.+.++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~----~l~~a~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKE----MLEVAREKGVKNVVEAKAEDLP-FPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHH----HHHHHHHHTCSCEEECCTTSCC-SCTTCEEEEEECSSHHHHC
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHH----HHHHHHhhcCCCEEECcHHHCC-CCCCCEEEEEEcchhhhcc
Confidence 34689999999999999999885 444544332 5556666543112221112233 44 8999999977555553
Q ss_pred cccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 147 KRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 147 ~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
.. ...+|.|+.|+|||||.+++....
T Consensus 129 ~~--~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 129 EN--KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp SC--HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cc--HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 22 579999999999999999998543
No 79
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.89 E-value=1.3e-09 Score=95.69 Aligned_cols=139 Identities=13% Similarity=0.154 Sum_probs=89.3
Q ss_pred CCCC-ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC----CCcchhhhh
Q 027471 67 NWSF-VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT----YPRTYDLLH 137 (223)
Q Consensus 67 ~~~~-iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t----yPrtyDllH 137 (223)
+... ..+|||+|||.|.++..|.++ .++++.+ |.......+.+.+.|+..-+.--+..|.. .|..||++.
T Consensus 175 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~ 253 (352)
T 3mcz_A 175 GVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVM 253 (352)
T ss_dssp GGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEE
T ss_pred CCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEE
Confidence 3444 789999999999999999765 3445554 32111122333344653312111222222 457899999
Q ss_pred hhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH-------H--------------------HHHHHHHHHHhCCCe
Q 027471 138 ADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA-------E--------------------TIVEVEDLVKSLHWD 190 (223)
Q Consensus 138 ~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~-------~--------------------~~~~i~~i~~~l~W~ 190 (223)
|.++++++.+. ....+|.++.|+|||||.+++.|.. . ....++++++.-.++
T Consensus 254 ~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (352)
T 3mcz_A 254 LNDCLHYFDAR-EAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLA 332 (352)
T ss_dssp EESCGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCE
T ss_pred EecccccCCHH-HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCc
Confidence 99999988752 2368999999999999999997420 0 023456666666676
Q ss_pred eEEeecCCCeeEEEEEec
Q 027471 191 VRMIYTNDNQGMLCVHKT 208 (223)
Q Consensus 191 ~~~~~~~~~e~~L~~~K~ 208 (223)
... ...+...+++++|+
T Consensus 333 ~~~-~~~g~~~l~~a~kp 349 (352)
T 3mcz_A 333 VGE-RSIGRYTLLIGQRS 349 (352)
T ss_dssp EEE-EEETTEEEEEEECC
T ss_pred eee-eccCceEEEEEecC
Confidence 543 23345778888885
No 80
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.89 E-value=1.1e-09 Score=93.50 Aligned_cols=127 Identities=17% Similarity=0.206 Sum_probs=82.8
Q ss_pred eEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCc-ccccccccccCCC-CC-cchhhhhhhhhhcccc
Q 027471 72 RNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNT-YP-RTYDLLHADHLFSTIK 146 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~t-yP-rtyDllH~~~lfs~~~ 146 (223)
.+|||+|||.|.++.++++.+ |+.+.+.|.......+.+...|+ +.+++ ..+.. +| .+||+|.|..++..
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~---~d~~~~~~~~~fD~Vv~n~~~~~-- 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLE---GSLEAALPFGPFDLLVANLYAEL-- 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEE---SCHHHHGGGCCEEEEEEECCHHH--
T ss_pred CEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEE---CChhhcCcCCCCCEEEECCcHHH--
Confidence 589999999999999888774 55566555432222222223354 22222 22222 44 78999988644332
Q ss_pred cccchhHHHHhhhhcccCCcEEEEeccH-HHHHHHHHHHHhCCCeeEEeecCCCeeEEEEEe
Q 027471 147 KRCSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 207 (223)
Q Consensus 147 ~rC~i~~vl~E~DRILRPgG~~ii~D~~-~~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K 207 (223)
+..++.++.|+|||||.+++++.. .....+.+.++...++.......+.-..|+++|
T Consensus 197 ----~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~~~~~W~~l~~~k 254 (254)
T 2nxc_A 197 ----HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR 254 (254)
T ss_dssp ----HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEEEETTEEEEEEEC
T ss_pred ----HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEeccCCeEEEEEEC
Confidence 458899999999999999998543 346778888888888875443444445555554
No 81
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.88 E-value=5.4e-10 Score=89.53 Aligned_cols=130 Identities=14% Similarity=0.200 Sum_probs=79.2
Q ss_pred ceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhC----ccc-ccccccccCCCCC-cchhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERG----LFG-LYHDWCESFNTYP-RTYDLLHADHL 141 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRG----Li~-~~~dwce~f~tyP-rtyDllH~~~l 141 (223)
-.+|||+|||.|.++..|.+. .|+.+.++|. .++.+.++. -+- ...|. ..++ ++ .+||+|.|...
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~----~~~~a~~~~~~~~~i~~~~~d~-~~~~-~~~~~fD~v~~~~~ 116 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFPNVTSVDYSSV----VVAAMQACYAHVPQLRWETMDV-RKLD-FPSASFDVVLEKGT 116 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHH----HHHHHHHHTTTCTTCEEEECCT-TSCC-SCSSCEEEEEEESH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHH----HHHHHHHhcccCCCcEEEEcch-hcCC-CCCCcccEEEECcc
Confidence 357999999999999999876 4566665443 333333331 122 22222 2232 44 89999999877
Q ss_pred hcccc------------cccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHH--HhCCCeeEEeecCC--CeeEEEE
Q 027471 142 FSTIK------------KRCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLV--KSLHWDVRMIYTND--NQGMLCV 205 (223)
Q Consensus 142 fs~~~------------~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~--~~l~W~~~~~~~~~--~e~~L~~ 205 (223)
|++.. +......+|.|+.|+|||||.+++.+....-. ...++ ....|......-.+ .--+.++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (215)
T 2pxx_A 117 LDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHF-RTRHYAQAYYGWSLRHATYGSGFHFHLYLM 195 (215)
T ss_dssp HHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHH-HHHHHCCGGGCEEEEEEEESGGGCEEEEEE
T ss_pred hhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHH-HHHHHhccccCcEEEEEEecCcceEEEEEE
Confidence 76543 12245699999999999999999987654321 22333 33467754322121 2335556
Q ss_pred Ee
Q 027471 206 HK 207 (223)
Q Consensus 206 ~K 207 (223)
+|
T Consensus 196 ~~ 197 (215)
T 2pxx_A 196 HK 197 (215)
T ss_dssp EE
T ss_pred Ee
Confidence 55
No 82
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.88 E-value=2e-10 Score=96.89 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=66.9
Q ss_pred ceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCc---ccccccccccCCC-CCcchhhhhhhhhhc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGL---FGLYHDWCESFNT-YPRTYDLLHADHLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGL---i~~~~dwce~f~t-yPrtyDllH~~~lfs 143 (223)
-.+|||+|||.|.++..|.+. .|+.+.+++.......+...+.|+ +..++.-++.++. -+.+||+|.|..+++
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 144 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFH 144 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGG
T ss_pred CCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhh
Confidence 358999999999999888765 455566544422212222223344 2233321222232 248999999988876
Q ss_pred cc-ccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 144 TI-KKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 144 ~~-~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
+. .+.-....+|.|+.|+|||||.+++....
T Consensus 145 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 145 YAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp GGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 52 22334568999999999999999998654
No 83
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.88 E-value=6.6e-10 Score=89.33 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=70.5
Q ss_pred EEEeeCCchHHHHHHhhCCCeEE--EEecCCCCCCChhhHHhh----Cc-ccccccccccCCCCC-cchhhhhhhhhhcc
Q 027471 73 NVMDMRAVYGGFAAALKDLKVWV--MNVVPIESPDTLPIIYER----GL-FGLYHDWCESFNTYP-RTYDLLHADHLFST 144 (223)
Q Consensus 73 nvLDmgaG~GgFAA~L~~~~V~v--mnv~p~~~~~~l~~i~eR----GL-i~~~~dwce~f~tyP-rtyDllH~~~lfs~ 144 (223)
+|||+|||.|.++.+|.+.+.-+ +.+++. .++.+.++ |+ +..+..-.+.++ ++ .+||+|.|. |.+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~--~~~ 104 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSV----GLAKAKQLAQEKGVKITTVQSNLADFD-IVADAWEGIVSI--FCH 104 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHH----HHHHHHHHHHHHTCCEEEECCBTTTBS-CCTTTCSEEEEE--CCC
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHH----HHHHHHHHHHhcCCceEEEEcChhhcC-CCcCCccEEEEE--hhc
Confidence 89999999999999999886533 333322 33333333 44 222221112222 44 899999984 334
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEeccH-----------------HHHHHHHHHHHhCCCeeE
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRDDA-----------------ETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D~~-----------------~~~~~i~~i~~~l~W~~~ 192 (223)
+ +......+|.++.|+|||||.+++.+.. -..+++.++++ .|++.
T Consensus 105 ~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~ 166 (202)
T 2kw5_A 105 L-PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWL 166 (202)
T ss_dssp C-CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEE
T ss_pred C-CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEE
Confidence 3 2234568999999999999999998321 12366777776 67664
No 84
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.88 E-value=5.8e-10 Score=100.56 Aligned_cols=115 Identities=18% Similarity=0.230 Sum_probs=79.7
Q ss_pred CceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhh---------C-c----ccccccccccCC---
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYER---------G-L----FGLYHDWCESFN--- 127 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eR---------G-L----i~~~~dwce~f~--- 127 (223)
.-.+|||+|||+|.++..|++. .|+.+.++|. .++.+.++ | + +-.++.-.+.+.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~----~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDN----QLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE 158 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHH----HHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHH----HHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc
Confidence 3468999999999998888664 4666776554 44444444 5 2 222322222331
Q ss_pred --CCC-cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH-----------------------HHHHHHH
Q 027471 128 --TYP-RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA-----------------------ETIVEVE 181 (223)
Q Consensus 128 --tyP-rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~-----------------------~~~~~i~ 181 (223)
.+| .+||+|+|..++.+..+ ...+|.|+.|+|||||++++.+.. -....+.
T Consensus 159 ~~~~~~~~fD~V~~~~~l~~~~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (383)
T 4fsd_A 159 PEGVPDSSVDIVISNCVCNLSTN---KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFR 235 (383)
T ss_dssp SCCCCTTCEEEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHH
T ss_pred cCCCCCCCEEEEEEccchhcCCC---HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHH
Confidence 344 89999999999988765 369999999999999999998421 1126677
Q ss_pred HHHHhCCCee
Q 027471 182 DLVKSLHWDV 191 (223)
Q Consensus 182 ~i~~~l~W~~ 191 (223)
++++.-.++.
T Consensus 236 ~ll~~aGF~~ 245 (383)
T 4fsd_A 236 RLVAEAGFRD 245 (383)
T ss_dssp HHHHHTTCCC
T ss_pred HHHHHCCCce
Confidence 8888777764
No 85
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.87 E-value=9.9e-10 Score=86.01 Aligned_cols=115 Identities=21% Similarity=0.245 Sum_probs=73.9
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCc---ccc-cccccccCCCCCcchhhhhhhhhhcc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGL---FGL-YHDWCESFNTYPRTYDLLHADHLFST 144 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL---i~~-~~dwce~f~tyPrtyDllH~~~lfs~ 144 (223)
-.+|||+|||.|.++..|.+.. |+.+.+.|.......+.+...|+ +-+ ..|+.+.++.. .+||+|.+...+.+
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~~~ 112 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSGGE 112 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCTTC
T ss_pred CCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCchHH
Confidence 3589999999999999998875 44455433211111222223344 112 22222222211 58999988765532
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEecc-HHHHHHHHHHHHhCCCeeE
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D~-~~~~~~i~~i~~~l~W~~~ 192 (223)
+..++.++.|+|+|||.+++.+. .+...++.++++...|++.
T Consensus 113 ------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 113 ------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp ------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCE
T ss_pred ------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceE
Confidence 46899999999999999999764 4556777888887777554
No 86
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.87 E-value=3.7e-10 Score=96.07 Aligned_cols=118 Identities=13% Similarity=0.120 Sum_probs=77.7
Q ss_pred CceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCc-ccccccccccCCC--CCcchhhhhhhhhhcc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNT--YPRTYDLLHADHLFST 144 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~t--yPrtyDllH~~~lfs~ 144 (223)
.-.+|||+|||.|.++.+|++++ |+.+.+++.......+.+.+.|+ +-.+. ..+.. ++.+||+|.|..+|.+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTAL---YDINAANIQENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE---CCGGGCCCCSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEE---eccccccccCCccEEEEccchhh
Confidence 35689999999999999998885 44455544322222333344465 11222 23322 2689999999999987
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEeccHH--------------HHHHHHHHHHhCCCeeEE
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRDDAE--------------TIVEVEDLVKSLHWDVRM 193 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~--------------~~~~i~~i~~~l~W~~~~ 193 (223)
... -.+..+|.++.|+|||||.+++..... ....+++++.. |++..
T Consensus 197 ~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~ 256 (286)
T 3m70_A 197 LNR-ERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLE 256 (286)
T ss_dssp SCG-GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEE
T ss_pred CCH-HHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEE
Confidence 743 346789999999999999987752110 13567777666 87653
No 87
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.87 E-value=1.1e-09 Score=90.98 Aligned_cols=101 Identities=17% Similarity=0.156 Sum_probs=61.9
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCc-ccccccccccCCCCCcchhhhhhh-hhhcccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNTYPRTYDLLHAD-HLFSTIK 146 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~tyPrtyDllH~~-~lfs~~~ 146 (223)
-.+|||+|||.|.++..|++++ |+.+.++|.......+...+.|+ +-.++.-...++ ++.+||+|.|. ..+.+.
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~~~~~~- 119 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-FKNEFDAVTMFFSTIMYF- 119 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-CCSCEEEEEECSSGGGGS-
T ss_pred CCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc-cCCCccEEEEcCCchhcC-
Confidence 4689999999999999998875 44455444322111222223344 222221111222 45889999875 233332
Q ss_pred cccchhHHHHhhhhcccCCcEEEEecc
Q 027471 147 KRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 147 ~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
+.-....+|.++.|+|+|||.+++.-+
T Consensus 120 ~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 120 DEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 222356899999999999999998643
No 88
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.87 E-value=1.9e-09 Score=95.22 Aligned_cols=141 Identities=21% Similarity=0.234 Sum_probs=88.5
Q ss_pred CCCCceEEEeeCCchHHHHHHhhCC--C--eEEEEecCCCCCCChhhHHhhCcccccccccccC-CCCCcchhhhhhhhh
Q 027471 67 NWSFVRNVMDMRAVYGGFAAALKDL--K--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESF-NTYPRTYDLLHADHL 141 (223)
Q Consensus 67 ~~~~iRnvLDmgaG~GgFAA~L~~~--~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f-~tyPrtyDllH~~~l 141 (223)
+.....+|||+|||.|.++..|.++ + ++++.+ |.......+.+.+.|+..-+.--+..+ ..+|..||++.|.++
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~v 257 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFV 257 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESC
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEecc
Confidence 3445679999999999999999765 3 444554 332111222333346532111112232 346666999999999
Q ss_pred hcccccccchhHHHHhhhhcccCCcEEEEecc--H--H-----------------------HHHHHHHHHHhCCCeeEE-
Q 027471 142 FSTIKKRCSLKAVVAEVDRILRPDGNLILRDD--A--E-----------------------TIVEVEDLVKSLHWDVRM- 193 (223)
Q Consensus 142 fs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~--~--~-----------------------~~~~i~~i~~~l~W~~~~- 193 (223)
++++.+. ....+|.++.|+|||||++++.|. . + ..++++++++.-.++...
T Consensus 258 l~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 336 (374)
T 1qzz_A 258 LLNWSDE-DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASE 336 (374)
T ss_dssp GGGSCHH-HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEE
T ss_pred ccCCCHH-HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 9887652 125899999999999999998766 2 1 123556667776776542
Q ss_pred eecCCCe-----eEEEEEecc
Q 027471 194 IYTNDNQ-----GMLCVHKTY 209 (223)
Q Consensus 194 ~~~~~~e-----~~L~~~K~~ 209 (223)
....... .++.|+|.=
T Consensus 337 ~~~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 337 RTSGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp EEECCSSCSSCEEEEEEEECC
T ss_pred EECCCCcccCCcEEEEEEECc
Confidence 2223334 788888864
No 89
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.87 E-value=3.8e-10 Score=100.94 Aligned_cols=102 Identities=10% Similarity=0.202 Sum_probs=69.2
Q ss_pred CCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC----CCcchhhhhhhh
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT----YPRTYDLLHADH 140 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t----yPrtyDllH~~~ 140 (223)
...++|||+|||.|.++.+|+++ .|+++.+ |.......+.+.+.|+.+-+.--+..|.. +|.+||++.+..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 45689999999999999999763 3566665 43212122333334653211111123332 678999999999
Q ss_pred hhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 141 LFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 141 lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+++++.+. ....+|.++-|+|||||.+++.|
T Consensus 257 vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 257 FLDCFSEE-EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp CSTTSCHH-HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred hhhhCCHH-HHHHHHHHHHHhcCCCcEEEEEe
Confidence 99888753 23588999999999999999964
No 90
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.87 E-value=3e-09 Score=81.46 Aligned_cols=127 Identities=13% Similarity=0.145 Sum_probs=77.0
Q ss_pred eEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCcccccccccccCC------C-CC-cchhhhhh
Q 027471 72 RNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFN------T-YP-RTYDLLHA 138 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~------t-yP-rtyDllH~ 138 (223)
.+|||+|||.|.++.+|.++ .|+.+.+.+ ...- ..+--...|.. .++ . ++ ++||+|.+
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-------~~~~~~~~d~~-~~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-------VGVDFLQGDFR-DELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------TTEEEEESCTT-SHHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------CcEEEEEcccc-cchhhhhhhccCCCCceeEEEE
Confidence 48999999999999988654 466777776 3221 11111222221 111 0 44 78999999
Q ss_pred hhhhcccccc--c------chhHHHHhhhhcccCCcEEEEeccHH-HHHHHHHHHHhCCCeeEEee------cCCCeeEE
Q 027471 139 DHLFSTIKKR--C------SLKAVVAEVDRILRPDGNLILRDDAE-TIVEVEDLVKSLHWDVRMIY------TNDNQGML 203 (223)
Q Consensus 139 ~~lfs~~~~r--C------~i~~vl~E~DRILRPgG~~ii~D~~~-~~~~i~~i~~~l~W~~~~~~------~~~~e~~L 203 (223)
...++..... . ....++.++.|+|||||.+++..... ....+.+.++. .|...... ....|.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 173 (180)
T 1ej0_A 95 DMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSREVYI 173 (180)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCCEEEE
T ss_pred CCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCceEEE
Confidence 7666543321 0 11588999999999999999974322 23344444444 35543211 23478999
Q ss_pred EEEec
Q 027471 204 CVHKT 208 (223)
Q Consensus 204 ~~~K~ 208 (223)
+|++.
T Consensus 174 ~~~~~ 178 (180)
T 1ej0_A 174 VATGR 178 (180)
T ss_dssp EEEEE
T ss_pred EEccC
Confidence 98763
No 91
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.86 E-value=6.5e-10 Score=92.47 Aligned_cols=100 Identities=13% Similarity=0.127 Sum_probs=62.2
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhh----Cc-ccc-cccccccCCCCC-cchhhhhh-h
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYER----GL-FGL-YHDWCESFNTYP-RTYDLLHA-D 139 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eR----GL-i~~-~~dwce~f~tyP-rtyDllH~-~ 139 (223)
-.+|||+|||+|.++..|.+.+ |+.+.++|. .++.+.++ |. +-+ ..|+.+-...++ ++||+|.| .
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~----~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~ 136 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDG----VFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHH----HHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred CCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHH----HHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECC
Confidence 4689999999999999998863 455555443 44444333 21 112 223322222355 89999988 3
Q ss_pred hhhc-ccccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 140 HLFS-TIKKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 140 ~lfs-~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
..++ ...+.-..+.++.|+.|+|||||.+++.+..
T Consensus 137 ~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 2211 1111222347899999999999999987543
No 92
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.86 E-value=5.1e-09 Score=89.77 Aligned_cols=137 Identities=14% Similarity=0.082 Sum_probs=87.1
Q ss_pred CCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcc--cccccccccCCC---CCcchhhhhhh
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLF--GLYHDWCESFNT---YPRTYDLLHAD 139 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi--~~~~dwce~f~t---yPrtyDllH~~ 139 (223)
..-.+|||+|||.|..+..|+.. .|+.+..++.......+.+.+-|+- -+++.-.+.++. ++.+||+|-|.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 34568999999999988777643 5677766554332233344445763 344432333332 34899999885
Q ss_pred hhhcccccccchhHHHHhhhhcccCCcEEEEec---cHHHHHHHHHHHHhCCCeeEEee------cCCCeeEEEEEeccc
Q 027471 140 HLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD---DAETIVEVEDLVKSLHWDVRMIY------TNDNQGMLCVHKTYW 210 (223)
Q Consensus 140 ~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D---~~~~~~~i~~i~~~l~W~~~~~~------~~~~e~~L~~~K~~w 210 (223)
.+ ..++.++.++.|+|||||.+++-. ..+.+..+++.++.+.+...... .+..-.+++.+|.-.
T Consensus 159 a~-------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~~~ 231 (249)
T 3g89_A 159 AV-------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAP 231 (249)
T ss_dssp SS-------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEECSC
T ss_pred Cc-------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeCCC
Confidence 22 345789999999999999998864 35566677777788888764221 122345566677544
Q ss_pred CC
Q 027471 211 RP 212 (223)
Q Consensus 211 ~~ 212 (223)
++
T Consensus 232 t~ 233 (249)
T 3g89_A 232 TP 233 (249)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 93
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.86 E-value=1.8e-09 Score=92.39 Aligned_cols=135 Identities=12% Similarity=0.120 Sum_probs=85.2
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcc--c-ccccccccCCCCCcchhhhhhhhhhc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLF--G-LYHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi--~-~~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
-.+|||+|||.|.++.+|++. .|+.+.++|..-....+.+...|+. - ...|+.+.++ +.+||+|-|..-|.
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPPYI 187 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCCCB
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCCCC
Confidence 357999999999999998743 4565655443211111222223542 2 2234333221 47899998863222
Q ss_pred -------------ccccc---------cchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeE--EeecCCC
Q 027471 144 -------------TIKKR---------CSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR--MIYTNDN 199 (223)
Q Consensus 144 -------------~~~~r---------C~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~--~~~~~~~ 199 (223)
+.... ..+..++.++-|+|+|||++++.........++++++...|+.. ..|..+.
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d~~g~ 267 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDN 267 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEECTTSS
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEecCCCC
Confidence 11110 12357899999999999999998766666778888777777532 3455678
Q ss_pred eeEEEEEe
Q 027471 200 QGMLCVHK 207 (223)
Q Consensus 200 e~~L~~~K 207 (223)
+++++++|
T Consensus 268 ~r~~~~~~ 275 (276)
T 2b3t_A 268 ERVTLGRY 275 (276)
T ss_dssp EEEEEEEC
T ss_pred CcEEEEEE
Confidence 99999875
No 94
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.85 E-value=1.4e-09 Score=94.89 Aligned_cols=134 Identities=11% Similarity=0.117 Sum_probs=73.7
Q ss_pred ceEEEeeCCchHHHHHHhhCC-CeEEEEecCCCCCC-ChhhH-HhhCc-ccccccccccCCCCC-cchhhhhhhhhhccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPD-TLPII-YERGL-FGLYHDWCESFNTYP-RTYDLLHADHLFSTI 145 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-~V~vmnv~p~~~~~-~l~~i-~eRGL-i~~~~dwce~f~tyP-rtyDllH~~~lfs~~ 145 (223)
..+|||+|||.|+|+..|+++ .|+.+.++|..... ..+.. ...|. +-.+++ +..+..+| .+||+|-|+..+. .
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~-~~D~~~l~~~~fD~V~sd~~~~-~ 152 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKS-RVDIHTLPVERTDVIMCDVGES-S 152 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEEC-SCCTTTSCCCCCSEEEECCCCC-C
T ss_pred CCEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEec-ccCHhHCCCCCCcEEEEeCccc-C
Confidence 468999999999999999886 68888888841110 00000 00111 111210 12333344 8999999975421 1
Q ss_pred ccc----cchhHHHHhhhhcccCCc--EEEEec----cHHHHHHHHHHHHhCCCeeEEe-e---cCCCeeEEEEEe
Q 027471 146 KKR----CSLKAVVAEVDRILRPDG--NLILRD----DAETIVEVEDLVKSLHWDVRMI-Y---TNDNQGMLCVHK 207 (223)
Q Consensus 146 ~~r----C~i~~vl~E~DRILRPgG--~~ii~D----~~~~~~~i~~i~~~l~W~~~~~-~---~~~~e~~L~~~K 207 (223)
.+. -....+|.++.|+||||| .|++.. ..++++.++.+.+.+. .+... . .+..|.+++|.+
T Consensus 153 ~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~~ 227 (265)
T 2oxt_A 153 PKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSRA 227 (265)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESSC
T ss_pred CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEecC
Confidence 110 000137889999999999 999863 2322233333322221 11111 1 245788888854
No 95
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.85 E-value=3.5e-09 Score=89.80 Aligned_cols=132 Identities=10% Similarity=0.049 Sum_probs=82.5
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc----ccccccccCCCCC--cchhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG----LYHDWCESFNTYP--RTYDLLHAD 139 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~----~~~dwce~f~tyP--rtyDllH~~ 139 (223)
-++|||+|||.|.++.+|++. .|+.+.+.|.......+.+.+.|+.. ...|..+.++..+ .+||+|.++
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 478999999999999999876 35666665442222233333446642 2334333344444 499999876
Q ss_pred hhhcccccccchhHHHHhhhhcccCCcEEEEeccHH------------HHHHHHHH----HHhCCCeeEEee---cCCCe
Q 027471 140 HLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE------------TIVEVEDL----VKSLHWDVRMIY---TNDNQ 200 (223)
Q Consensus 140 ~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~------------~~~~i~~i----~~~l~W~~~~~~---~~~~e 200 (223)
.- ......++.++-|+|||||++++.+... ....++++ .+.-++...... ....+
T Consensus 144 ~~------~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~D 217 (248)
T 3tfw_A 144 AD------KPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGTKGWD 217 (248)
T ss_dssp SC------GGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECSTTCSE
T ss_pred Cc------hHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCCCCCC
Confidence 31 1224578999999999999999974421 12233333 344456654331 13458
Q ss_pred eEEEEEec
Q 027471 201 GMLCVHKT 208 (223)
Q Consensus 201 ~~L~~~K~ 208 (223)
.+.+++|+
T Consensus 218 G~~i~~~~ 225 (248)
T 3tfw_A 218 GFTLAWVN 225 (248)
T ss_dssp EEEEEEEC
T ss_pred eeEEEEEe
Confidence 89999985
No 96
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.85 E-value=1.6e-09 Score=88.90 Aligned_cols=122 Identities=13% Similarity=0.109 Sum_probs=76.5
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcc--cccccccccCCC-CC-cchhhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLF--GLYHDWCESFNT-YP-RTYDLLHADHLF 142 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi--~~~~dwce~f~t-yP-rtyDllH~~~lf 142 (223)
-..|||+|||.|.++..|+++ .|+.+.+++.......+.+...|+. -+++.-...++. ++ .+||+|.+....
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~ 121 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSD 121 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCC
Confidence 457999999999999988764 4666666554322223333345652 233221222332 54 789999887322
Q ss_pred cc-----cccccchhHHHHhhhhcccCCcEEEEe-ccHHHHHHHHHHHHhCCCeeE
Q 027471 143 ST-----IKKRCSLKAVVAEVDRILRPDGNLILR-DDAETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 143 s~-----~~~rC~i~~vl~E~DRILRPgG~~ii~-D~~~~~~~i~~i~~~l~W~~~ 192 (223)
.. ...+-....++.++.|+|+|||.+++. |..+....+.++++...|...
T Consensus 122 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 122 PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeee
Confidence 11 111112357999999999999999997 455566677777666677654
No 97
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.85 E-value=7.5e-10 Score=95.27 Aligned_cols=95 Identities=12% Similarity=0.239 Sum_probs=61.3
Q ss_pred CceEEEeeCCchHHHHH----HhhC--CCe----EEEEecCCCCCCChhhHHhh-----Ccccccccc----cccCC---
Q 027471 70 FVRNVMDMRAVYGGFAA----ALKD--LKV----WVMNVVPIESPDTLPIIYER-----GLFGLYHDW----CESFN--- 127 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA----~L~~--~~V----~vmnv~p~~~~~~l~~i~eR-----GLi~~~~dw----ce~f~--- 127 (223)
.-.+|||+|||.|.++. .+.. .++ +.+..++ +.++.+.++ |+..+-..| .+.++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~----~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSA----EQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCH----HHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCH----HHHHHHHHHHHhccCCCcceEEEEecchhhhhhhh
Confidence 34689999999998654 3332 244 3333322 234444433 443221111 11232
Q ss_pred --CCC-cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 128 --TYP-RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 128 --tyP-rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
.|+ .+||+|+|..++.+..+ .+..|.|+.|+|||||.+++.
T Consensus 128 ~~~~~~~~fD~V~~~~~l~~~~d---~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLYYVKD---IPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp HTTTCCCCEEEEEEESCGGGCSC---HHHHHHHHHHTEEEEEEEEEE
T ss_pred ccccCCCceeEEEEeeeeeecCC---HHHHHHHHHHHcCCCcEEEEE
Confidence 133 89999999999999876 368999999999999999986
No 98
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.84 E-value=2.6e-09 Score=89.14 Aligned_cols=101 Identities=16% Similarity=0.303 Sum_probs=60.7
Q ss_pred cCCCCCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhC-ccccccccccc--CCCCCcchhhh
Q 027471 64 MGINWSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERG-LFGLYHDWCES--FNTYPRTYDLL 136 (223)
Q Consensus 64 l~i~~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRG-Li~~~~dwce~--f~tyPrtyDll 136 (223)
++++.+ .+|||+|||+|.++..|++. .|+.+.++|......++.+..+. +..+..|..+. +..++.+||+|
T Consensus 53 ~~~~~g--~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V 130 (210)
T 1nt2_A 53 LKLRGD--ERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLI 130 (210)
T ss_dssp CCCCSS--CEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEE
T ss_pred cCCCCC--CEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEE
Confidence 344443 47999999999999887653 46777665542111222222221 22223332221 12245899999
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
.|+. . +.-....++.|+.|+|||||.+++.
T Consensus 131 ~~~~--~---~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 131 YQDI--A---QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EECC--C---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEec--c---ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 8862 1 1111235689999999999999997
No 99
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.84 E-value=2.9e-09 Score=94.31 Aligned_cols=103 Identities=14% Similarity=0.138 Sum_probs=68.3
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCC-cchhhhhhhhhh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLF 142 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP-rtyDllH~~~lf 142 (223)
.....+|||+|||.|.++.+|.++ .|+++.+ |.......+.+.+.|+.+-+.--+..+...| ..+|++.+..++
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl 266 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRIL 266 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCG
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechh
Confidence 445679999999999999999865 4555655 4322222222333466431211123333323 334999999999
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+++.+. ....+|.++-|+|||||.+++.|
T Consensus 267 h~~~d~-~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 267 YSANEQ-LSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp GGSCHH-HHHHHHHHHHTTCCTTCEEEEEE
T ss_pred ccCCHH-HHHHHHHHHHHhcCCCCEEEEEe
Confidence 988752 24689999999999999998875
No 100
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.84 E-value=6.5e-09 Score=88.67 Aligned_cols=123 Identities=15% Similarity=0.200 Sum_probs=76.4
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCc-cc-----cccccc-ccCCC--CC-cchhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGL-FG-----LYHDWC-ESFNT--YP-RTYDLLH 137 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGL-i~-----~~~dwc-e~f~t--yP-rtyDllH 137 (223)
-.+|||+|||+|+|+..|++++ |+.+.++|..- +.+..+.- .. -+...+ +.++. |+ .+||++-
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml----~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~ 113 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQL----AWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSF 113 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCC----CHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSS
T ss_pred CCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHH----HHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEh
Confidence 4589999999999999998774 56677766543 33222210 00 011111 33443 34 5666654
Q ss_pred hhhhhcccccccchhHHHHhhhhcccCCcEEEEec-------------------cH---HHHHHHHHHHHhCCCeeEEee
Q 027471 138 ADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD-------------------DA---ETIVEVEDLVKSLHWDVRMIY 195 (223)
Q Consensus 138 ~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D-------------------~~---~~~~~i~~i~~~l~W~~~~~~ 195 (223)
++ +..+|.|+.|+|||||.+++.. +. ....++..+++...|++...+
T Consensus 114 ~~-----------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 114 IS-----------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp SC-----------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred hh-----------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 43 2689999999999999999861 11 124567777888888875432
Q ss_pred -c------CCCeeEEEEEec
Q 027471 196 -T------NDNQGMLCVHKT 208 (223)
Q Consensus 196 -~------~~~e~~L~~~K~ 208 (223)
+ .+-|-++.++|.
T Consensus 183 ~~pi~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 183 FSPIKGGAGNVEFLVHLLKD 202 (232)
T ss_dssp ECSSCBTTTBCCEEEEEEES
T ss_pred EccCCCCCCCHHHHHHHhhc
Confidence 1 235667777773
No 101
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.83 E-value=7.2e-10 Score=90.86 Aligned_cols=93 Identities=16% Similarity=0.267 Sum_probs=65.0
Q ss_pred eEEEeeCCchHHHHHHhhCC-CeEEEEecCCCCCCChhhHHhh----Cc-ccccccccccCCC--CCcchhhhhhhh-hh
Q 027471 72 RNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPDTLPIIYER----GL-FGLYHDWCESFNT--YPRTYDLLHADH-LF 142 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~-~V~vmnv~p~~~~~~l~~i~eR----GL-i~~~~dwce~f~t--yPrtyDllH~~~-lf 142 (223)
.+|||+|||.|.++..|.+. .|+.+.++|. .++.+.++ |. +..++ ..+.. ++.+||+|.|.. ++
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADHYEVTGVDLSEE----MLEIAQEKAMETNRHVDFWV---QDMRELELPEPVDAITILCDSL 107 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTTSEEEEEESCHH----HHHHHHHHHHHTTCCCEEEE---CCGGGCCCSSCEEEEEECTTGG
T ss_pred CeEEEecCCCCHHHHHHhhCCeEEEEECCHH----HHHHHHHhhhhcCCceEEEE---cChhhcCCCCCcCEEEEeCCch
Confidence 68999999999999999887 4455555443 33333332 32 22222 22222 458999999875 77
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
.+..+......+|.++.|+|||||.++++
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 77755555678999999999999999995
No 102
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.83 E-value=9.4e-10 Score=97.47 Aligned_cols=99 Identities=12% Similarity=0.196 Sum_probs=67.8
Q ss_pred CCCCCceEEEeeCCchHHHHHHhhCC--C--eEEEEecCCCCCCChhhHHhhCccc----ccccccccCCCCCcchhhhh
Q 027471 66 INWSFVRNVMDMRAVYGGFAAALKDL--K--VWVMNVVPIESPDTLPIIYERGLFG----LYHDWCESFNTYPRTYDLLH 137 (223)
Q Consensus 66 i~~~~iRnvLDmgaG~GgFAA~L~~~--~--V~vmnv~p~~~~~~l~~i~eRGLi~----~~~dwce~f~tyPrtyDllH 137 (223)
++.....+|||+|||.|.++.+|+++ + ++++++.+.... +.+.+.|+.. ..+| .|...| +||++.
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~---~~~~~~~~~~~v~~~~~d---~~~~~p-~~D~v~ 252 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVAR---HRLDAPDVAGRWKVVEGD---FLREVP-HADVHV 252 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTT---CCCCCGGGTTSEEEEECC---TTTCCC-CCSEEE
T ss_pred CCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhc---ccccccCCCCCeEEEecC---CCCCCC-CCcEEE
Confidence 34556789999999999999999774 3 444554222111 1111233322 2333 234567 999999
Q ss_pred hhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 138 ADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 138 ~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+.++++++.+. ....+|.|+-|+|||||.+++.|
T Consensus 253 ~~~vlh~~~d~-~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 253 LKRILHNWGDE-DSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EESCGGGSCHH-HHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EehhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 99999988753 23589999999999999999975
No 103
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.83 E-value=9.6e-10 Score=91.26 Aligned_cols=120 Identities=7% Similarity=0.052 Sum_probs=73.2
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCccc--cc-ccccccCCC-CC-cchhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFG--LY-HDWCESFNT-YP-RTYDLLHADHL 141 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~--~~-~dwce~f~t-yP-rtyDllH~~~l 141 (223)
-..|||+|||.|.++.+|+++ .|+.+.+++.......+.+.+.|+.. ++ .|.. .++. ++ .+||.|++...
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~-~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDAD-TLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGG-GHHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHH-HHHhhcCcCCcCEEEEECC
Confidence 346999999999999998764 45555554432222223333456632 33 2322 2332 44 88998876311
Q ss_pred hc-----ccccccchhHHHHhhhhcccCCcEEEEe-ccHHHHHHHHHHHHhCCCee
Q 027471 142 FS-----TIKKRCSLKAVVAEVDRILRPDGNLILR-DDAETIVEVEDLVKSLHWDV 191 (223)
Q Consensus 142 fs-----~~~~rC~i~~vl~E~DRILRPgG~~ii~-D~~~~~~~i~~i~~~l~W~~ 191 (223)
.. +...+.....+|.++.|+|+|||.+++. |.......+...+....|..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLL 173 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcc
Confidence 10 1122322468999999999999999986 56556666666655556654
No 104
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.83 E-value=4.6e-10 Score=90.25 Aligned_cols=101 Identities=10% Similarity=0.143 Sum_probs=63.5
Q ss_pred ceEEEeeCCchHHH-HHHhhCCC--eEEEEecCCCCCCChhhHHhhCc-ccccccccccCCCCC-cchhhhhhhhhhccc
Q 027471 71 VRNVMDMRAVYGGF-AAALKDLK--VWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNTYP-RTYDLLHADHLFSTI 145 (223)
Q Consensus 71 iRnvLDmgaG~GgF-AA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~tyP-rtyDllH~~~lfs~~ 145 (223)
-.+|||+|||.|.+ .+.+...+ |+.+.+++.......+.+.+.|. +..++.-.+.++ ++ .+||+|.|.+++.+.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~ 102 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP-FKDESMSFVYSYGTIFHM 102 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC-SCTTCEEEEEECSCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC-CCCCceeEEEEcChHHhC
Confidence 35899999999997 45555554 55555544322212222222342 222221112233 44 899999998888776
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
. .-....++.|+.|+|||||.+++.+.
T Consensus 103 ~-~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 103 R-KNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp C-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-HHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 3 23356899999999999999999853
No 105
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.82 E-value=1.8e-09 Score=93.54 Aligned_cols=112 Identities=12% Similarity=0.095 Sum_probs=71.0
Q ss_pred hhhccCCCCCCceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhh-----------Cc--cccccccc
Q 027471 60 YLNGMGINWSFVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYER-----------GL--FGLYHDWC 123 (223)
Q Consensus 60 Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eR-----------GL--i~~~~dwc 123 (223)
+.+.+......-.+|||+|||.|.++..|.+. .|+.+.+++. .++.+.++ +. +..+..-+
T Consensus 24 ~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~----~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~ 99 (313)
T 3bgv_A 24 FLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADV----SVKQCQQRYEDMKNRRDSEYIFSAEFITADS 99 (313)
T ss_dssp HHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHH----HHHHHHHHHHHHHSSSCC-CCCEEEEEECCT
T ss_pred HHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHH----HHHHHHHHHHHhhhcccccccceEEEEEecc
Confidence 45544322224568999999999999999865 4556665543 33333332 11 12233223
Q ss_pred ccCC---CC---Ccchhhhhhhhhhccc-ccccchhHHHHhhhhcccCCcEEEEeccHH
Q 027471 124 ESFN---TY---PRTYDLLHADHLFSTI-KKRCSLKAVVAEVDRILRPDGNLILRDDAE 175 (223)
Q Consensus 124 e~f~---ty---PrtyDllH~~~lfs~~-~~rC~i~~vl~E~DRILRPgG~~ii~D~~~ 175 (223)
+.++ .+ +.+||+|.|..+++.. .+.-....+|.++.|+|||||.++++....
T Consensus 100 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 100 SKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred cccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 3433 14 2599999998877654 333345689999999999999999986543
No 106
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.82 E-value=1.9e-09 Score=88.26 Aligned_cols=132 Identities=11% Similarity=0.084 Sum_probs=78.3
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc---c-cccccccCCCCC----cchhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG---L-YHDWCESFNTYP----RTYDLLH 137 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~---~-~~dwce~f~tyP----rtyDllH 137 (223)
-.+|||+|||.|.++.+|++. .|+.+.+.|.......+.+.+.|+.. + ..|..+.++.++ .+||+|.
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 468999999999999999876 35556654432222233333446633 2 223222222222 5799998
Q ss_pred hhhhhcccccccchhHHHHhhhhcccCCcEEEEeccHH------------HHHHHHHHH----HhCCCeeEEee---cCC
Q 027471 138 ADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE------------TIVEVEDLV----KSLHWDVRMIY---TND 198 (223)
Q Consensus 138 ~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~------------~~~~i~~i~----~~l~W~~~~~~---~~~ 198 (223)
++...+ ....++.++-|+|||||.+++.+... ....++++. ..=++...... ..+
T Consensus 139 ~d~~~~------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~ 212 (223)
T 3duw_A 139 IDADKQ------NNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTVGSKG 212 (223)
T ss_dssp ECSCGG------GHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETTE
T ss_pred EcCCcH------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEeccCCCC
Confidence 763321 23578999999999999999974322 122333333 33355554322 234
Q ss_pred CeeEEEEEec
Q 027471 199 NQGMLCVHKT 208 (223)
Q Consensus 199 ~e~~L~~~K~ 208 (223)
.+.+++++++
T Consensus 213 ~dG~~~~~~~ 222 (223)
T 3duw_A 213 YDGFIMAVVK 222 (223)
T ss_dssp EEEEEEEEEC
T ss_pred CCeeEEEEEe
Confidence 6788888764
No 107
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.82 E-value=3e-09 Score=86.27 Aligned_cols=97 Identities=22% Similarity=0.300 Sum_probs=63.9
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhh----Cc-ccc-cccccccCCCCC-cchhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYER----GL-FGL-YHDWCESFNTYP-RTYDLLHADHL 141 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eR----GL-i~~-~~dwce~f~tyP-rtyDllH~~~l 141 (223)
-.+|||+|||.|.++..|.+++ |+.+.++|. .++.+.++ |. +-. ..|.. .++ ++ .+||+|.|..+
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~~~~~d~~-~~~-~~~~~~D~v~~~~~ 112 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISED----MIRKAREYAKSRESNVEFIVGDAR-KLS-FEDKTFDYVIFIDS 112 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCCEEEECCTT-SCC-SCTTCEEEEEEESC
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHH----HHHHHHHHHHhcCCCceEEECchh-cCC-CCCCcEEEEEEcCc
Confidence 4589999999999999998874 555555443 33333322 21 222 22221 222 34 79999999877
Q ss_pred hcccccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 142 FSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 142 fs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
+..... -....++.++.|+|||||.+++.+..
T Consensus 113 ~~~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 113 IVHFEP-LELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GGGCCH-HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hHhCCH-HHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 443321 23468999999999999999998654
No 108
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.81 E-value=4.3e-09 Score=94.22 Aligned_cols=137 Identities=18% Similarity=0.284 Sum_probs=91.1
Q ss_pred CCCCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCccc----ccccccccCCCCCcchhhhh
Q 027471 66 INWSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFG----LYHDWCESFNTYPRTYDLLH 137 (223)
Q Consensus 66 i~~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~----~~~dwce~f~tyPrtyDllH 137 (223)
++.....+|||+|||.|.++..|+++ .++++.+ |.......+.+.+.|+.. ..+| .|..+|..||++.
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d---~~~~~p~~~D~v~ 273 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGD---FFETIPDGADVYL 273 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC---TTTCCCSSCSEEE
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccC---CCCCCCCCceEEE
Confidence 34556789999999999999999775 3555555 432222333344456533 2233 2334666899999
Q ss_pred hhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH------------H------------HHHHHHHHHHhCCCeeEE
Q 027471 138 ADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA------------E------------TIVEVEDLVKSLHWDVRM 193 (223)
Q Consensus 138 ~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~------------~------------~~~~i~~i~~~l~W~~~~ 193 (223)
|.++++++.+. ....+|.++-|+|||||++++.|.. + ..++++++++.-.++...
T Consensus 274 ~~~vlh~~~d~-~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 352 (369)
T 3gwz_A 274 IKHVLHDWDDD-DVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVER 352 (369)
T ss_dssp EESCGGGSCHH-HHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEE
T ss_pred hhhhhccCCHH-HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEE
Confidence 99999888752 2247999999999999999996421 0 134566777777777653
Q ss_pred ee--cCCCeeEEEEEe
Q 027471 194 IY--TNDNQGMLCVHK 207 (223)
Q Consensus 194 ~~--~~~~e~~L~~~K 207 (223)
.. ......++.|+|
T Consensus 353 ~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 353 SLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEECSSSSEEEEEEEE
T ss_pred EEECCCCCcEEEEEEe
Confidence 32 345567777776
No 109
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.81 E-value=1e-09 Score=92.33 Aligned_cols=117 Identities=15% Similarity=0.094 Sum_probs=72.8
Q ss_pred CceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCccc--c-cccccccCCC-CC-cchhhhhhhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFG--L-YHDWCESFNT-YP-RTYDLLHADH 140 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~--~-~~dwce~f~t-yP-rtyDllH~~~ 140 (223)
.-..|||+|||.|.++..|+++ .|+.+.+++..-....+.+.+.|+-. + ..|-.+.++. +| .+||.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 3468999999999999999754 36666665543332344455567643 2 2232222332 55 8999988752
Q ss_pred hhcccc-----cccchhHHHHhhhhcccCCcEEEEe-ccHHHHHHHHHHHHh
Q 027471 141 LFSTIK-----KRCSLKAVVAEVDRILRPDGNLILR-DDAETIVEVEDLVKS 186 (223)
Q Consensus 141 lfs~~~-----~rC~i~~vl~E~DRILRPgG~~ii~-D~~~~~~~i~~i~~~ 186 (223)
...... .|-.-..++.++.|+|||||.+++. |.......+..++..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 111111 1111236999999999999999886 555566666665544
No 110
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.81 E-value=4.6e-09 Score=91.03 Aligned_cols=138 Identities=17% Similarity=0.189 Sum_probs=85.5
Q ss_pred CCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcccccccccccCC--CCCcchhhhhhhhhh
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFN--TYPRTYDLLHADHLF 142 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~--tyPrtyDllH~~~lf 142 (223)
....+|||+|||.|.++..|.++ .++++.+. .......+.+.+.|+..-+.--+..+. .+|..||+|.|.+++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 45678999999999999999865 35555553 211112223333465431211123333 256669999999999
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEeccHH---------------------------HHHHHHHHHHhCCCeeEEe-
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRDDAE---------------------------TIVEVEDLVKSLHWDVRMI- 194 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~---------------------------~~~~i~~i~~~l~W~~~~~- 194 (223)
+++.+. ....+|.++-|+|+|||++++.|... ..++++++++.-.++....
T Consensus 243 ~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 243 HHFDVA-TCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp GGSCHH-HHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred ccCCHH-HHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 887532 23689999999999999998864310 0345666677666765422
Q ss_pred ecCCCeeEEEEEec
Q 027471 195 YTNDNQGMLCVHKT 208 (223)
Q Consensus 195 ~~~~~e~~L~~~K~ 208 (223)
+......+++++++
T Consensus 322 ~~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 322 SLPTTQQQVIVAYK 335 (335)
T ss_dssp CCTTSSSEEEEEEC
T ss_pred ECCCCceeEEEecC
Confidence 22334456666653
No 111
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.81 E-value=2.7e-09 Score=88.15 Aligned_cols=121 Identities=8% Similarity=-0.060 Sum_probs=76.5
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC-CC--cchhhh
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT-YP--RTYDLL 136 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t-yP--rtyDll 136 (223)
..+.+.. -.+|||+|||+|.++.+|+++ .|+.+.+.|.......+.+.+.|+..-+.-.+..+.. .+ ..||+|
T Consensus 49 ~~l~~~~--~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v 126 (204)
T 3njr_A 49 AALAPRR--GELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAV 126 (204)
T ss_dssp HHHCCCT--TCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEE
T ss_pred HhcCCCC--CCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEE
Confidence 3444444 368999999999999888876 4555665544222222333344665211111223333 22 479998
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEec-cHHHHHHHHHHHHhCCCeeE
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD-DAETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D-~~~~~~~i~~i~~~l~W~~~ 192 (223)
-+...+ ..+ ++.++.|+|||||.+++.. ..+...++.+.++...+++.
T Consensus 127 ~~~~~~-------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~ 175 (204)
T 3njr_A 127 FIGGGG-------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLL 175 (204)
T ss_dssp EECSCC-------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEE
T ss_pred EECCcc-------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEE
Confidence 776321 345 9999999999999999985 45567777777777777654
No 112
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.80 E-value=1.3e-09 Score=94.55 Aligned_cols=44 Identities=27% Similarity=0.364 Sum_probs=35.7
Q ss_pred CCcchhhhhhhhhhcccc---cccchhHHHHhhhhcccCCcEEEEec
Q 027471 129 YPRTYDLLHADHLFSTIK---KRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 129 yPrtyDllH~~~lfs~~~---~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
.+.+||+|.|..++.+.. +...+..++.++.|+|||||+||+..
T Consensus 174 ~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 174 QTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 348999999988875432 34456799999999999999999973
No 113
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.80 E-value=4.7e-09 Score=92.44 Aligned_cols=136 Identities=20% Similarity=0.312 Sum_probs=86.0
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC--CeEE--EEecCCCCCCChhhHHhhCccc----ccccccccCCCCCcchhhhhhh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL--KVWV--MNVVPIESPDTLPIIYERGLFG----LYHDWCESFNTYPRTYDLLHAD 139 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~--~V~v--mnv~p~~~~~~l~~i~eRGLi~----~~~dwce~f~tyPrtyDllH~~ 139 (223)
.....+|||+|||.|.++.+|.++ ++.+ +++ |.......+.+.+.|+.+ ..+| .+..+|..||++.+.
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~~~~~~D~v~~~ 256 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGD---FFEPLPRKADAIILS 256 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECC---TTSCCSSCEEEEEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCC---CCCCCCCCccEEEEc
Confidence 345678999999999999999765 3444 444 321111222233345532 2233 233466669999999
Q ss_pred hhhcccccccchhHHHHhhhhcccCCcEEEEeccH--H------------------------HHHHHHHHHHhCCCeeEE
Q 027471 140 HLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA--E------------------------TIVEVEDLVKSLHWDVRM 193 (223)
Q Consensus 140 ~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~--~------------------------~~~~i~~i~~~l~W~~~~ 193 (223)
++++++.+. ....+|.++-|+|+|||.+++.|.. . ..++++++++.-.++...
T Consensus 257 ~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (360)
T 1tw3_A 257 FVLLNWPDH-DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEE 335 (360)
T ss_dssp SCGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred ccccCCCHH-HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEE
Confidence 999887642 2258999999999999999987643 1 123456666666676542
Q ss_pred ee-cCCC-----eeEEEEEec
Q 027471 194 IY-TNDN-----QGMLCVHKT 208 (223)
Q Consensus 194 ~~-~~~~-----e~~L~~~K~ 208 (223)
.. .... ..++.|+|+
T Consensus 336 ~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 336 VRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEECSSSSCEEEEEEEEEC
T ss_pred EEeCCCCcccCccEEEEEEeC
Confidence 22 2222 567888874
No 114
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.79 E-value=5.5e-09 Score=88.58 Aligned_cols=122 Identities=11% Similarity=0.185 Sum_probs=79.6
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCcc---cccc-cccccCCCCC-cchhhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGLF---GLYH-DWCESFNTYP-RTYDLLHADHLF 142 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGLi---~~~~-dwce~f~tyP-rtyDllH~~~lf 142 (223)
-.+|||+|||.|.++..|++++ |+.+.+.|.......+.+...|+- -+++ |..+....++ .+||+|-|+--|
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 4589999999999999998873 444444333222122223334553 2333 3322222354 899999986444
Q ss_pred ccc-----------------ccccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeE
Q 027471 143 STI-----------------KKRCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 143 s~~-----------------~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~ 192 (223)
... ...+.++.++.++-|+|||||.+++.-..+....+...++...|...
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEE
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceE
Confidence 221 12356778999999999999999998777777788888888888764
No 115
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.78 E-value=9.2e-09 Score=87.53 Aligned_cols=130 Identities=14% Similarity=0.158 Sum_probs=85.2
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc---cc-ccccccCCCC-----Ccchhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG---LY-HDWCESFNTY-----PRTYDLL 136 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~---~~-~dwce~f~ty-----PrtyDll 136 (223)
-++|||+|||.|.++.+|++. .|+.+.+.|.......+.+...|+.. ++ .|..+.++.+ +.+||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 468999999999999988762 57788888877666677777777743 22 2322223333 5789999
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH------------HHHHHHHHHHHhCC----CeeEEeecCCCe
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA------------ETIVEVEDLVKSLH----WDVRMIYTNDNQ 200 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~------------~~~~~i~~i~~~l~----W~~~~~~~~~~e 200 (223)
.++.. .-....++.++-|+|||||.+++.|.. .....++++.+.+. ++..+. .-.+
T Consensus 141 ~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p~~d 212 (242)
T 3r3h_A 141 FIDAD------KTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLL--AIAD 212 (242)
T ss_dssp EEESC------GGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEE--SSSS
T ss_pred EEcCC------hHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEE--EccC
Confidence 87632 122446888999999999999997432 12234555544443 333322 2356
Q ss_pred eEEEEEec
Q 027471 201 GMLCVHKT 208 (223)
Q Consensus 201 ~~L~~~K~ 208 (223)
++++++|+
T Consensus 213 G~~~~~k~ 220 (242)
T 3r3h_A 213 GMFLVQPI 220 (242)
T ss_dssp CEEEEEEC
T ss_pred ceEEEEEc
Confidence 78888874
No 116
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.78 E-value=5.1e-09 Score=87.60 Aligned_cols=95 Identities=14% Similarity=0.158 Sum_probs=64.2
Q ss_pred ceEEEeeCCchHHHHHHhhC--C--CeEEEEecCCCCCCChhhHHhhCcc---c-ccccccccCC-CCCcchhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKD--L--KVWVMNVVPIESPDTLPIIYERGLF---G-LYHDWCESFN-TYPRTYDLLHADHL 141 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~--~--~V~vmnv~p~~~~~~l~~i~eRGLi---~-~~~dwce~f~-tyPrtyDllH~~~l 141 (223)
-.+|||+|||.|.++.+|++ . .|+.+.+.|.......+.+.+.|+. - ...|..+.++ ..+.+||+|.+..-
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 46899999999999999988 3 4566666554332233344445653 2 2333333344 44689999987622
Q ss_pred hcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 142 FSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 142 fs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
......++.++-|+|||||.+++.
T Consensus 152 ------~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 152 ------KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ------SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred ------HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 223567899999999999999994
No 117
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.77 E-value=2e-09 Score=96.36 Aligned_cols=100 Identities=17% Similarity=0.151 Sum_probs=68.4
Q ss_pred ceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC--CC-cchhhhhhhhhhcc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT--YP-RTYDLLHADHLFST 144 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t--yP-rtyDllH~~~lfs~ 144 (223)
-.+|||+|||.|.++..+++. .|+.+.+++ ......+.+.+.|+...+.=.+..+.. +| .+||+|.|..+...
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~ 145 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYC 145 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBT
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccccc
Confidence 468999999999999999887 456666653 222244455566774322212223333 55 89999999765554
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEe
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
......++.++.+++|+|||||.++..
T Consensus 146 l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 146 LFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 444445678999999999999999765
No 118
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.77 E-value=1.4e-08 Score=85.32 Aligned_cols=104 Identities=12% Similarity=0.103 Sum_probs=65.8
Q ss_pred ccCCCCCCceEEEeeCCchHHHHHHhhCC-----CeEEEEecCC--CCCCChhhHH----hhCccc---ccc-c-c-ccc
Q 027471 63 GMGINWSFVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPI--ESPDTLPIIY----ERGLFG---LYH-D-W-CES 125 (223)
Q Consensus 63 ~l~i~~~~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~--~~~~~l~~i~----eRGLi~---~~~-d-w-ce~ 125 (223)
.+++..+ .+|||+|||.|.++..|+++ .|+.+.+++. .++..++.+. +.|+.. ++. | . .+.
T Consensus 38 ~~~~~~~--~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 38 AWQVKPG--EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDL 115 (275)
T ss_dssp HHTCCTT--CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCC
T ss_pred HcCCCCC--CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhcc
Confidence 3444443 58999999999999998765 3555666554 1223444443 334422 222 1 1 111
Q ss_pred CCCCC-cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 126 FNTYP-RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 126 f~tyP-rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
++ ++ .+||+|+|.+++.+..+. +.++..+.++++|||++++.+
T Consensus 116 ~~-~~~~~fD~v~~~~~l~~~~~~---~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 116 GP-IADQHFDRVVLAHSLWYFASA---NALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp GG-GTTCCCSEEEEESCGGGSSCH---HHHHHHHHHHTTTCSEEEEEE
T ss_pred CC-CCCCCEEEEEEccchhhCCCH---HHHHHHHHHHhCCCCEEEEEE
Confidence 22 34 899999999999887654 355666677777799999974
No 119
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.77 E-value=2.5e-09 Score=87.53 Aligned_cols=130 Identities=16% Similarity=0.140 Sum_probs=78.6
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc---c-cccccccCCCCC-----cchhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG---L-YHDWCESFNTYP-----RTYDLL 136 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~---~-~~dwce~f~tyP-----rtyDll 136 (223)
-.+|||+|||.|.++.+|++. .|+.+.+.|.......+.+.+.|+.. + ..|..+.++.++ .+||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 358999999999999999875 35666665442222333344446533 2 223333333333 789999
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccHH------------HHHHHHHHHH----hCCCeeEEeecCCCe
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE------------TIVEVEDLVK----SLHWDVRMIYTNDNQ 200 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~------------~~~~i~~i~~----~l~W~~~~~~~~~~e 200 (223)
.+... ......++.++-|+|||||++++.|... ....++.+.+ .-++..... .-.+
T Consensus 145 ~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p~~d 216 (225)
T 3tr6_A 145 YIDAD------KANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILI--PIGD 216 (225)
T ss_dssp EECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE--CSTT
T ss_pred EECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEE--EcCC
Confidence 86531 2234578999999999999999985421 1223444433 334554433 2346
Q ss_pred eEEEEEec
Q 027471 201 GMLCVHKT 208 (223)
Q Consensus 201 ~~L~~~K~ 208 (223)
.+++++|+
T Consensus 217 G~~~~~k~ 224 (225)
T 3tr6_A 217 GLTLARKK 224 (225)
T ss_dssp CEEEEEEC
T ss_pred ccEEEEEC
Confidence 78888774
No 120
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.77 E-value=1.1e-09 Score=90.43 Aligned_cols=134 Identities=15% Similarity=0.112 Sum_probs=80.2
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc----ccccccccCCCCC-----cchhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG----LYHDWCESFNTYP-----RTYDLL 136 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~----~~~dwce~f~tyP-----rtyDll 136 (223)
-.+|||+|||.|.++.+|++. .|+.+.+.|.......+.+...|+-. +..|..+.++.++ .+||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 468999999999999999873 46666665543222333333456632 2334334455555 699999
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccHHH-HHH-HHHHHHhCCCeeEEee-----cCCCeeEEEEEec
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAET-IVE-VEDLVKSLHWDVRMIY-----TNDNQGMLCVHKT 208 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~-~~~-i~~i~~~l~W~~~~~~-----~~~~e~~L~~~K~ 208 (223)
.++...+++.+ ...++.++ |+|||||.+++.|.... ... ++.+.+.=.++..... ....+.+.+++++
T Consensus 139 ~~d~~~~~~~~---~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 139 FLDHWKDRYLP---DTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp EECSCGGGHHH---HHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred EEcCCcccchH---HHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 88755544432 12566677 99999999999865321 122 2222333345554322 1235678888765
No 121
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.75 E-value=4.4e-09 Score=90.60 Aligned_cols=116 Identities=12% Similarity=0.071 Sum_probs=75.5
Q ss_pred ceEEEeeCCchHHHHHHhhCCCe--EEEEecCCCCCCChhhHHhh-Cc-------------------ccccccccccCCC
Q 027471 71 VRNVMDMRAVYGGFAAALKDLKV--WVMNVVPIESPDTLPIIYER-GL-------------------FGLYHDWCESFNT 128 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~V--~vmnv~p~~~~~~l~~i~eR-GL-------------------i~~~~dwce~f~t 128 (223)
-..|||+|||.|.++.+|++++. +.+.++|. .++.+.++ ++ ..-+.-.|..+..
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~----~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGHTVVGVEISEI----GIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTCEEEEECSCHH----HHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHH----HHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 45799999999999999999864 44444443 44444332 11 0111222344444
Q ss_pred CC----cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEE-ecc--------H---HHHHHHHHHHHhCCCeeE
Q 027471 129 YP----RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLIL-RDD--------A---ETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 129 yP----rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii-~D~--------~---~~~~~i~~i~~~l~W~~~ 192 (223)
.| .+||+|-+..+|.+.. ....+.++.|+.|+|||||.+++ +-. . -..+++..++.. .|++.
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~-~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~ 222 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAIN-PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQ 222 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSC-GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCC-HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEE
Confidence 32 7899999888887664 33456899999999999999964 310 0 124677777776 47764
No 122
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.74 E-value=4.4e-09 Score=87.09 Aligned_cols=108 Identities=13% Similarity=0.162 Sum_probs=71.8
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCc-cc-ccccccccCCCC-Ccchhhhhhhhhhccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGL-FG-LYHDWCESFNTY-PRTYDLLHADHLFSTI 145 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL-i~-~~~dwce~f~ty-PrtyDllH~~~lfs~~ 145 (223)
-.+|||+|||.|.++..|++.+ |+.+.++|. .++.+.++.- +. ...|+.+.++.- +.+||+|.|.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAARWAAYDFSPE----LLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSSEEEEEESCHH----HHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHH----HHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 3579999999999999999875 444554332 5666666521 11 334444455543 5899999886
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCee
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDV 191 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~ 191 (223)
-....+|.|+.|+|||||.++..........+.+.+....+..
T Consensus 119 ---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 119 ---RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp ---SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEE
T ss_pred ---CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 1345889999999999999994432223345566666655554
No 123
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.74 E-value=3.2e-09 Score=84.73 Aligned_cols=129 Identities=15% Similarity=0.172 Sum_probs=69.4
Q ss_pred ceEEEeeCCchHHHHHHhhCC-------------CeEEEEecCCCCCCChhhHHhhCccccccccccc-C-----CCCC-
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-------------KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCES-F-----NTYP- 130 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-------------~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~-f-----~tyP- 130 (223)
-.+|||+|||.|.++.+|+++ .|+.+.++|........++ . ..|..+. + ..++
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~-~------~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFL-C------PADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEE-C------SCCTTSHHHHHHHHHHSGG
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEE-E------eccCCCHHHHHHHHHhcCC
Confidence 368999999999999998764 3677777764321111111 0 1111000 0 0134
Q ss_pred cchhhhhhhhhhcccc----c----ccchhHHHHhhhhcccCCcEEEEeccHH-HHHHHHHHHHhCCCe-eEEe-e----
Q 027471 131 RTYDLLHADHLFSTIK----K----RCSLKAVVAEVDRILRPDGNLILRDDAE-TIVEVEDLVKSLHWD-VRMI-Y---- 195 (223)
Q Consensus 131 rtyDllH~~~lfs~~~----~----rC~i~~vl~E~DRILRPgG~~ii~D~~~-~~~~i~~i~~~l~W~-~~~~-~---- 195 (223)
++||+|-|+..++... + ......++.|+-|+|||||.+++.+... ....+...++.. +. +... .
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~-f~~v~~~~~~~~~ 174 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEE-FQNVRIIKPEASR 174 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHH-EEEEEEECCC---
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHH-hcceEEECCcccC
Confidence 6899998864333211 1 1112478999999999999999984321 223333333332 22 2211 1
Q ss_pred cCCCeeEEEEEe
Q 027471 196 TNDNQGMLCVHK 207 (223)
Q Consensus 196 ~~~~e~~L~~~K 207 (223)
....|.++++..
T Consensus 175 ~~~~e~~~v~~g 186 (196)
T 2nyu_A 175 KESSEVYFLATQ 186 (196)
T ss_dssp -----EEEEEEE
T ss_pred ccCceEEEEeee
Confidence 234688888875
No 124
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.74 E-value=8e-09 Score=90.63 Aligned_cols=103 Identities=11% Similarity=-0.031 Sum_probs=68.6
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcc-ccccccccc-C---CCCCcchh
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLF-GLYHDWCES-F---NTYPRTYD 134 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi-~~~~dwce~-f---~tyPrtyD 134 (223)
+.+++.. -.+|||+|||+|.++..|++++ |+.+.++|. .++.+.++--- .+-.+|.+. + ...+.+||
T Consensus 39 ~~l~l~~--g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~----ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD 112 (261)
T 3iv6_A 39 FLENIVP--GSTVAVIGASTRFLIEKALERGASVTVFDFSQR----MCDDLAEALADRCVTIDLLDITAEIPKELAGHFD 112 (261)
T ss_dssp HTTTCCT--TCEEEEECTTCHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCS
T ss_pred HhcCCCC--cCEEEEEeCcchHHHHHHHhcCCEEEEEECCHH----HHHHHHHHHHhccceeeeeecccccccccCCCcc
Confidence 3444433 4689999999999999998874 555665443 44444443211 122233221 1 12357999
Q ss_pred hhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 135 LLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 135 llH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+|.|..++.++... ....++.++.|+| |||.++++-
T Consensus 113 ~Vv~~~~l~~~~~~-~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 113 FVLNDRLINRFTTE-EARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp EEEEESCGGGSCHH-HHHHHHHHHHHHH-TTSEEEEEE
T ss_pred EEEEhhhhHhCCHH-HHHHHHHHHHHhC-cCcEEEEEe
Confidence 99999888876532 3568999999999 999999983
No 125
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.74 E-value=1.3e-09 Score=93.34 Aligned_cols=64 Identities=20% Similarity=0.315 Sum_probs=47.3
Q ss_pred CC-cchhhhhhhhhhcccccc-cchhHHHHhhhhcccCCcEEEEeccH----------------HHHHHHHHHHHhCCCe
Q 027471 129 YP-RTYDLLHADHLFSTIKKR-CSLKAVVAEVDRILRPDGNLILRDDA----------------ETIVEVEDLVKSLHWD 190 (223)
Q Consensus 129 yP-rtyDllH~~~lfs~~~~r-C~i~~vl~E~DRILRPgG~~ii~D~~----------------~~~~~i~~i~~~l~W~ 190 (223)
+| .+||+|.|..+|.+.... .....+|.|+.|+|||||+|++.+.. -..+.+.++++.-.++
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 249 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYK 249 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEE
T ss_pred cCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCe
Confidence 44 789999999888774332 24568999999999999999997311 1246778887777776
Q ss_pred eE
Q 027471 191 VR 192 (223)
Q Consensus 191 ~~ 192 (223)
..
T Consensus 250 ~~ 251 (289)
T 2g72_A 250 VR 251 (289)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 126
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.74 E-value=4.3e-09 Score=95.29 Aligned_cols=101 Identities=15% Similarity=0.181 Sum_probs=66.9
Q ss_pred CceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCcccccccccccCCC--CCcchhhhhhhhhhcc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT--YPRTYDLLHADHLFST 144 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t--yPrtyDllH~~~lfs~ 144 (223)
.-.+|||+|||+|.++..|++.+ |+.+..+ .......+.+.+.|+...+.=.|..+.. +|..||+|.|..+...
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~~~ 141 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGYF 141 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCBTT
T ss_pred CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChhhc
Confidence 34689999999999999998874 5555554 2222244455566764322111223333 4589999999654443
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEe
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
..+.-.++.++.+++|+|+|||.++++
T Consensus 142 l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 142 LLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp BTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred ccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 333334668999999999999999886
No 127
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.73 E-value=8.2e-09 Score=91.75 Aligned_cols=100 Identities=16% Similarity=0.083 Sum_probs=59.3
Q ss_pred ceEEEeeCCchHHHHHHhhCC-CeEEEEecCCCCCCChhh--HHhhCcccccccccc-cCCCCC-cchhhhhhhhhhc--
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPDTLPI--IYERGLFGLYHDWCE-SFNTYP-RTYDLLHADHLFS-- 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-~V~vmnv~p~~~~~~l~~--i~eRGLi~~~~dwce-~f~tyP-rtyDllH~~~lfs-- 143 (223)
..+|||+|||.|+|+..|+++ .|..+.+....++..+.. +...|...+ .--+. .+-..| .+||+|.|+..++
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~D~~~l~~~~fD~V~sd~~~~~g 161 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLV-RLQSGVDVFFIPPERCDTLLCDIGESSP 161 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGE-EEECSCCTTTSCCCCCSEEEECCCCCCS
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCe-EEEeccccccCCcCCCCEEEECCccccC
Confidence 468999999999999999987 477777622211111110 011122211 10112 222334 7999999986664
Q ss_pred cc-ccccchhHHHHhhhhcccCCcEEEEe
Q 027471 144 TI-KKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 144 ~~-~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
++ .+.-....+|.++.|+|||||.|++.
T Consensus 162 ~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 162 NPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 11 11110114789999999999999996
No 128
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.71 E-value=3.9e-09 Score=87.44 Aligned_cols=99 Identities=12% Similarity=-0.019 Sum_probs=66.0
Q ss_pred CceEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC------CC--cchhhhhhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT------YP--RTYDLLHAD 139 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t------yP--rtyDllH~~ 139 (223)
.-.+|||+|||+|.++..|+++ .|+.+.++|. .++.+.++--..-+.--|..+.. |+ ..||+|.|.
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~----~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKS----ALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHH----HHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHH----HHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 3457999999999999999876 4666666443 44444444211111111223322 22 348999999
Q ss_pred hhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 140 HLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 140 ~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
.++++... -....+|.|+.|+|||||++++.+.
T Consensus 132 ~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 132 TGFHHIPV-EKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp SSSTTSCG-GGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred chhhcCCH-HHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 88888763 2356999999999999999888743
No 129
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.71 E-value=1.9e-09 Score=97.02 Aligned_cols=130 Identities=14% Similarity=0.088 Sum_probs=79.8
Q ss_pred CceEEEeeCCchHHHHHHhh----CCCeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCC-cchhhhhhhhhhcc
Q 027471 70 FVRNVMDMRAVYGGFAAALK----DLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFST 144 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~----~~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP-rtyDllH~~~lfs~ 144 (223)
.-.+|||+|||.|++++.+. .-.|+.+.+.|.......+.+.+.|+ .-+.--|+....+| ++||+|.+..+
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~--- 197 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAAL--- 197 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTT---
T ss_pred CcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCC---
Confidence 34689999999998876543 22567777766544334444555587 32222234444466 89999987543
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEeccHHHH----HHHH-HHHHhCCCeeEEee--cC-CCeeEEEEEec
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRDDAETI----VEVE-DLVKSLHWDVRMIY--TN-DNQGMLCVHKT 208 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~----~~i~-~i~~~l~W~~~~~~--~~-~~e~~L~~~K~ 208 (223)
. -..+.++.|+-|+|||||.+++++....- ..+. ...+ .|+..... .+ -...+.+++|.
T Consensus 198 ~---~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 198 A---EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSGKVNNTSVLVFKC 264 (298)
T ss_dssp C---SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCTTCCCEEEEEEEC
T ss_pred c---cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCCCcCcEEEEEEcc
Confidence 1 23458999999999999999999643221 1111 1122 56654332 22 25668888774
No 130
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.71 E-value=7.5e-09 Score=90.95 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=58.6
Q ss_pred ceEEEeeCCchHHHHHHhhCC-CeEEEEecCCCCCC-ChhhH-HhhCc-ccccccccccCCCC-Ccchhhhhhhhhhccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPD-TLPII-YERGL-FGLYHDWCESFNTY-PRTYDLLHADHLFSTI 145 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-~V~vmnv~p~~~~~-~l~~i-~eRGL-i~~~~dwce~f~ty-PrtyDllH~~~lfs~~ 145 (223)
..+|||+|||+|+|+..|+++ .|+.+.++|....- ..+.. ...|. +-.+.+ +..+..+ +.+||+|-|+..+...
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~-~~D~~~l~~~~fD~Vvsd~~~~~~ 161 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKS-KVDVTKMEPFQADTVLCDIGESNP 161 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEEC-SCCGGGCCCCCCSEEEECCCCCCS
T ss_pred CCEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEec-cCcHhhCCCCCcCEEEECCCcCCC
Confidence 468999999999999999886 68888888831100 00000 00111 111200 1122224 4899999987542110
Q ss_pred c---cccchhHHHHhhhhcccCCc--EEEEe
Q 027471 146 K---KRCSLKAVVAEVDRILRPDG--NLILR 171 (223)
Q Consensus 146 ~---~rC~i~~vl~E~DRILRPgG--~~ii~ 171 (223)
. +.-....+|.++.|+||||| .|++.
T Consensus 162 ~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 162 TAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred chhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 0 10000137899999999999 99886
No 131
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.70 E-value=4e-09 Score=91.37 Aligned_cols=116 Identities=12% Similarity=0.081 Sum_probs=76.9
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCcccccccccccCCCC--Ccchhhhhhhhhhccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTY--PRTYDLLHADHLFSTI 145 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~ty--PrtyDllH~~~lfs~~ 145 (223)
-.+|||+|||+|+|+..+++.+ |+.+.++|..-....+-+...|+-..+.-.|.....+ +.+||+|.++..
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p---- 201 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV---- 201 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC----
T ss_pred CCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc----
Confidence 3589999999999999887652 6666555442221222233346643222222333333 489999988633
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEeccH-------HHHHHHHHHHHhCCCeeEE
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILRDDA-------ETIVEVEDLVKSLHWDVRM 193 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~D~~-------~~~~~i~~i~~~l~W~~~~ 193 (223)
+....++.++-|+|||||.+++.+.. +....+.+.++...|++..
T Consensus 202 ---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ---VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ---SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ---hhHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 23357889999999999999996443 3467888889999998765
No 132
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.69 E-value=1.5e-09 Score=94.17 Aligned_cols=101 Identities=18% Similarity=0.232 Sum_probs=67.9
Q ss_pred ccCCCCCCceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc-ccccccccCCCCC---cch
Q 027471 63 GMGINWSFVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYP---RTY 133 (223)
Q Consensus 63 ~l~i~~~~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~-~~~dwce~f~tyP---rty 133 (223)
.|+|++| -+|||+|||.|.|+.+|++. .|..+.++|.......+.+.+++-+- +..|-+. ...|| .++
T Consensus 72 ~l~ikpG--~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~-p~~~~~~~~~v 148 (233)
T 4df3_A 72 ELPVKEG--DRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARF-PEKYRHLVEGV 148 (233)
T ss_dssp CCCCCTT--CEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTC-GGGGTTTCCCE
T ss_pred hcCCCCC--CEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccC-ccccccccceE
Confidence 3446665 48999999999999999864 48888887765443444445555433 4444322 22233 788
Q ss_pred hhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 134 DLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 134 DllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
|++.+.. .+.. ..+.++.|+.|+|||||.+++.
T Consensus 149 DvVf~d~--~~~~---~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 149 DGLYADV--AQPE---QAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEEECC--CCTT---HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEec--cCCh---hHHHHHHHHHHhccCCCEEEEE
Confidence 9877642 2111 2347899999999999999986
No 133
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.68 E-value=2.7e-08 Score=84.31 Aligned_cols=111 Identities=13% Similarity=0.119 Sum_probs=70.6
Q ss_pred eEEEeeCCchHHHHHHhhCC--------CeEEEEecCCCCCCChhhHHhhCccc-cccccccc--CCCCC-cchhhhhhh
Q 027471 72 RNVMDMRAVYGGFAAALKDL--------KVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCES--FNTYP-RTYDLLHAD 139 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~--------~V~vmnv~p~~~~~~l~~i~eRGLi~-~~~dwce~--f~tyP-rtyDllH~~ 139 (223)
.+|||+|||+|..++.|++. .|+.+.++|.......+ .... +- +..|..+. ++..+ .+||+|+++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~--~~~~-v~~~~gD~~~~~~l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS--DMEN-ITLHQGDCSDLTTFEHLREMAHPLIFID 159 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG--GCTT-EEEEECCSSCSGGGGGGSSSCSSEEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc--cCCc-eEEEECcchhHHHHHhhccCCCCEEEEC
Confidence 58999999999999998653 47777777765432211 0111 22 22332221 23233 379999976
Q ss_pred hhhcccccccchhHHHHhhhh-cccCCcEEEEeccHHH-----HHHHHHHHHhC--CCee
Q 027471 140 HLFSTIKKRCSLKAVVAEVDR-ILRPDGNLILRDDAET-----IVEVEDLVKSL--HWDV 191 (223)
Q Consensus 140 ~lfs~~~~rC~i~~vl~E~DR-ILRPgG~~ii~D~~~~-----~~~i~~i~~~l--~W~~ 191 (223)
.. + .....+|.|+.| +|||||++++.|.... ...+.++++.. .++.
T Consensus 160 ~~--~----~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 160 NA--H----ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp SS--C----SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred Cc--h----HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 43 1 145689999998 9999999999874221 23677777776 4554
No 134
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.66 E-value=5.4e-09 Score=88.24 Aligned_cols=99 Identities=12% Similarity=0.075 Sum_probs=55.0
Q ss_pred ceEEEeeCCchHHHHHHhh--CCC--eEEEEecCCCC----CCChhhHHhhCcccccccccccCCCCC----cchhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALK--DLK--VWVMNVVPIES----PDTLPIIYERGLFGLYHDWCESFNTYP----RTYDLLHA 138 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~--~~~--V~vmnv~p~~~----~~~l~~i~eRGLi~~~~dwce~f~tyP----rtyDllH~ 138 (223)
-..|||+|||.|.++.+|+ ..+ |+.+.++|... ....+.+.++|+..+-. -+.....+| ..+|.+++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~-~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVF-VIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEE-ECCBTTBCCGGGTTCEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEE-EEcCHHHhhhhccCeEEEEEE
Confidence 4689999999999999998 444 45555553321 10122234556643111 122333334 33444443
Q ss_pred hhhhcc--cccccchhHHHHhhhhcccCCcEEEE
Q 027471 139 DHLFST--IKKRCSLKAVVAEVDRILRPDGNLIL 170 (223)
Q Consensus 139 ~~lfs~--~~~rC~i~~vl~E~DRILRPgG~~ii 170 (223)
...+.. ...+-....+|.|+.|+|||||.+++
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 211110 00111234789999999999999999
No 135
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.66 E-value=1e-07 Score=76.17 Aligned_cols=126 Identities=13% Similarity=0.088 Sum_probs=81.2
Q ss_pred eEEEeeCCchHHHHHHhhCCC-eEEEEecCCCCCCChhhHHhhCcccccccccccCCCCC-cchhhhhhhhhhcccccc-
Q 027471 72 RNVMDMRAVYGGFAAALKDLK-VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIKKR- 148 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~-V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP-rtyDllH~~~lfs~~~~r- 148 (223)
.+|||+|||+|.++.+|+++. |+.+.++|. .++. ...+--...| .+..++ .+||+|-|+..|....+.
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~----~~~~--~~~~~~~~~d---~~~~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRNTVVSTDLNIR----ALES--HRGGNLVRAD---LLCSINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTSEEEEEESCHH----HHHT--CSSSCEEECS---TTTTBCGGGCSEEEECCCCBTTCCCT
T ss_pred CeEEEeccCccHHHHHHHhcCcEEEEECCHH----HHhc--ccCCeEEECC---hhhhcccCCCCEEEECCCCccCCccc
Confidence 389999999999999999986 334444332 2222 1121112233 223345 899999998766643221
Q ss_pred -----cchhHHHHhhhhcccCCcEEEEeccH-HHHHHHHHHHHhCCCeeEEee--cCCCeeEEEEEe
Q 027471 149 -----CSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDVRMIY--TNDNQGMLCVHK 207 (223)
Q Consensus 149 -----C~i~~vl~E~DRILRPgG~~ii~D~~-~~~~~i~~i~~~l~W~~~~~~--~~~~e~~L~~~K 207 (223)
.....++.++-|.| |||.+++.... .....+.++++...|+..... ....|++++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~ 161 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIKG 161 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEEE
T ss_pred cccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEEE
Confidence 12236788888888 99999997543 456788888888889875432 344566666543
No 136
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.66 E-value=5.5e-09 Score=85.20 Aligned_cols=95 Identities=16% Similarity=0.083 Sum_probs=62.7
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc---cc-ccccccCCCCCcchhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG---LY-HDWCESFNTYPRTYDLLHADHL 141 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~---~~-~dwce~f~tyPrtyDllH~~~l 141 (223)
-.+|||+|||.|.++.+|++. .|+.+.+.|.......+.+...|+.. ++ .|..+.++..+. ||+|.++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~- 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC- 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET-
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC-
Confidence 458999999999999999865 45666654442222223333446532 22 233333344567 99998762
Q ss_pred hcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 142 FSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 142 fs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
.......++.++-|+|||||.+++.+
T Consensus 135 -----~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 -----DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp -----TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred -----ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 12345689999999999999999965
No 137
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.66 E-value=1.3e-08 Score=87.86 Aligned_cols=133 Identities=14% Similarity=0.169 Sum_probs=75.2
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhh-CcccccccccccC--CCCCcchhhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYER-GLFGLYHDWCESF--NTYPRTYDLLHADHLF 142 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eR-GLi~~~~dwce~f--~tyPrtyDllH~~~lf 142 (223)
-.+|||+|||+|+++..|++. .|+.+.++|....+.++.+.+| .+..+..|-.... ...+.+||+|.++..+
T Consensus 77 g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 77 GTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC
T ss_pred CCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC
Confidence 468999999999999888764 4777887665321123333343 2222344422211 1124789999887332
Q ss_pred cccccccchhHHHH-hhhhcccCCcEEEEecc----------HHHHHHHHHHHHhCCCeeEE-eec---CCCeeEEEEEe
Q 027471 143 STIKKRCSLKAVVA-EVDRILRPDGNLILRDD----------AETIVEVEDLVKSLHWDVRM-IYT---NDNQGMLCVHK 207 (223)
Q Consensus 143 s~~~~rC~i~~vl~-E~DRILRPgG~~ii~D~----------~~~~~~i~~i~~~l~W~~~~-~~~---~~~e~~L~~~K 207 (223)
+....++. .+.|+|||||.++++-. .++...+...++.-..+... .+- +.+.-+++++|
T Consensus 157 ------~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 157 ------PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKY 230 (232)
T ss_dssp ------TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEE
T ss_pred ------hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEEe
Confidence 22234444 56679999999998721 11222333344443444332 121 34678888888
Q ss_pred cc
Q 027471 208 TY 209 (223)
Q Consensus 208 ~~ 209 (223)
++
T Consensus 231 ~~ 232 (232)
T 3id6_C 231 KG 232 (232)
T ss_dssp C-
T ss_pred CC
Confidence 63
No 138
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.65 E-value=1.9e-08 Score=84.59 Aligned_cols=132 Identities=15% Similarity=0.140 Sum_probs=82.9
Q ss_pred eEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCcc-c----ccccccccCCCC-Ccchhhhhhhh
Q 027471 72 RNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLF-G----LYHDWCESFNTY-PRTYDLLHADH 140 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi-~----~~~dwce~f~ty-PrtyDllH~~~ 140 (223)
.+|||+|||.|.++.+|++. .|+.+.+.|.......+.+.+.|+- . ...|..+.++.+ +.+||+|.++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 38999999999999888752 4666666544332233444445654 2 222323344456 48999997763
Q ss_pred hhcccccccchhHHHHhhhhcccCCcEEEEeccH------------HHHHHHHHHHHhCCCeeE--EeecCCCeeEEEEE
Q 027471 141 LFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA------------ETIVEVEDLVKSLHWDVR--MIYTNDNQGMLCVH 206 (223)
Q Consensus 141 lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~------------~~~~~i~~i~~~l~W~~~--~~~~~~~e~~L~~~ 206 (223)
.. -....++.++-|+|||||.+++.|.. .....+.++.+.++..-. ...-.-.+.+++++
T Consensus 138 ~~------~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~~~ 211 (221)
T 3dr5_A 138 SP------MDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAGLTVVT 211 (221)
T ss_dssp CT------TTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEEEE
T ss_pred cH------HHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccchHHHHH
Confidence 21 22356899999999999999997432 123355666666666532 11123467899999
Q ss_pred ecc
Q 027471 207 KTY 209 (223)
Q Consensus 207 K~~ 209 (223)
|.+
T Consensus 212 ~~~ 214 (221)
T 3dr5_A 212 KAL 214 (221)
T ss_dssp ECC
T ss_pred HHH
Confidence 875
No 139
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.65 E-value=2e-08 Score=91.54 Aligned_cols=114 Identities=11% Similarity=0.110 Sum_probs=71.8
Q ss_pred eEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCccc---ccccccccCCCCC-cchhhhhhhhhhc
Q 027471 72 RNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFG---LYHDWCESFNTYP-RTYDLLHADHLFS 143 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~---~~~dwce~f~tyP-rtyDllH~~~lfs 143 (223)
.+|||+|||+|.++..|+++ .|+.+.+++.......+.+.+.|+.. +-..++..+..++ .+||+|-|...|+
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~nppfh 303 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 303 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECCCC-
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECCCcc
Confidence 68999999999999999776 46666665543332333344456432 2111223444456 7999999988886
Q ss_pred ccc--cccchhHHHHhhhhcccCCcEEEEecc--HHHHHHHHHHHH
Q 027471 144 TIK--KRCSLKAVVAEVDRILRPDGNLILRDD--AETIVEVEDLVK 185 (223)
Q Consensus 144 ~~~--~rC~i~~vl~E~DRILRPgG~~ii~D~--~~~~~~i~~i~~ 185 (223)
... .+-....++.++-|+|||||.+++..+ ......+++++.
T Consensus 304 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 304 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp ------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred cCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 432 222334789999999999999999643 224445555444
No 140
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.65 E-value=2.7e-08 Score=84.59 Aligned_cols=112 Identities=15% Similarity=0.115 Sum_probs=68.0
Q ss_pred CceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHh----------hCccc--ccc-cccccCCC-CC-
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYE----------RGLFG--LYH-DWCESFNT-YP- 130 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~e----------RGLi~--~~~-dwce~f~t-yP- 130 (223)
.-..|||+|||+|.++..|++. .|+.+.+++. .++.+.+ .|+.. +++ |..+.++. ++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~----~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVK----VSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHH----HHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCT
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHH----HHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCC
Confidence 3467999999999999999865 4666666543 2222211 23422 222 22112332 44
Q ss_pred cchhhhhhhhhhc-------ccccccchhHHHHhhhhcccCCcEEEEe-ccHHHHHHHHHHHHhC
Q 027471 131 RTYDLLHADHLFS-------TIKKRCSLKAVVAEVDRILRPDGNLILR-DDAETIVEVEDLVKSL 187 (223)
Q Consensus 131 rtyDllH~~~lfs-------~~~~rC~i~~vl~E~DRILRPgG~~ii~-D~~~~~~~i~~i~~~l 187 (223)
.+||.|.+. |. +.+.|...+.+|.|+.|+|||||.|++. |.......+...+...
T Consensus 122 ~~~D~v~~~--~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~ 184 (235)
T 3ckk_A 122 GQLTKMFFL--FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEH 184 (235)
T ss_dssp TCEEEEEEE--SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred cCeeEEEEe--CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 899998653 21 1223333468999999999999999985 6666666665555444
No 141
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.63 E-value=1.9e-08 Score=82.67 Aligned_cols=139 Identities=17% Similarity=0.285 Sum_probs=75.5
Q ss_pred hhccCCCCCCceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhh-Cccccccccccc--CCCCCcc
Q 027471 61 LNGMGINWSFVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYER-GLFGLYHDWCES--FNTYPRT 132 (223)
Q Consensus 61 ~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eR-GLi~~~~dwce~--f~tyPrt 132 (223)
++.+.+..+ .+|||+|||.|.++..|+++ .|+.+.++|.......+.+.++ ++--...|..+. +...+.+
T Consensus 66 l~~~~~~~~--~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 66 LKNFPIKPG--KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCCCCCCTT--CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCC
T ss_pred HHhcCCCCC--CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCC
Confidence 333444443 48999999999999988754 4666666553111111111111 221122332221 1223578
Q ss_pred hhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH---------H-H-HHHHHHHHHhCCCeeEEe-ec---C
Q 027471 133 YDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA---------E-T-IVEVEDLVKSLHWDVRMI-YT---N 197 (223)
Q Consensus 133 yDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~---------~-~-~~~i~~i~~~l~W~~~~~-~~---~ 197 (223)
||+|.++.. .......++.++.|+|||||.+++.-.. . . ...++.+ ..- ++.... +- +
T Consensus 144 ~D~v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~~~~ 216 (227)
T 1g8a_A 144 VDVIFEDVA-----QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLEPYE 216 (227)
T ss_dssp EEEEEECCC-----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECTTTS
T ss_pred ceEEEECCC-----CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccCccc
Confidence 999887632 1111235599999999999999996111 1 1 2456666 333 765422 21 2
Q ss_pred CCeeEEEEEec
Q 027471 198 DNQGMLCVHKT 208 (223)
Q Consensus 198 ~~e~~L~~~K~ 208 (223)
.+.-+++++|+
T Consensus 217 ~~~~~~~~~~~ 227 (227)
T 1g8a_A 217 KDHALFVVRKT 227 (227)
T ss_dssp SSEEEEEEECC
T ss_pred CCCEEEEEEeC
Confidence 33556777763
No 142
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.63 E-value=6.6e-09 Score=92.34 Aligned_cols=131 Identities=12% Similarity=0.109 Sum_probs=81.3
Q ss_pred eEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhcccc-
Q 027471 72 RNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIK- 146 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~- 146 (223)
.+|||+|||+|.++..|.++ .|+.+.+++..-....+.+.+.|+-..+. ++..++..+.+||+|.|...|+...
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~-~~d~~~~~~~~fD~Iv~~~~~~~g~~ 276 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVF-ASNVFSEVKGRFDMIISNPPFHDGMQ 276 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEE-ECSTTTTCCSCEEEEEECCCCCSSSH
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEE-EccccccccCCeeEEEECCCcccCcc
Confidence 47999999999999998754 47777765543222222333345532221 2223333358999999988887432
Q ss_pred -cccchhHHHHhhhhcccCCcEEEEeccHH--HHHHHHHHHHhCCCeeEEeecCCCeeEEEEEe
Q 027471 147 -KRCSLKAVVAEVDRILRPDGNLILRDDAE--TIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 207 (223)
Q Consensus 147 -~rC~i~~vl~E~DRILRPgG~~ii~D~~~--~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K 207 (223)
+......++.|+.|+|||||.+++..... .-..++++... +.....+.+=+++.++|
T Consensus 277 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~----~~~~~~~~gf~v~~~~k 336 (343)
T 2pjd_A 277 TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGF----HEVIAQTGRFKVYRAIM 336 (343)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSC----CEEEEECSSEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCc----eEEEeeCCCEEEEEEEe
Confidence 12234689999999999999999974432 33444444442 22222345666777766
No 143
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.63 E-value=1.8e-09 Score=85.31 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=62.3
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCccc----ccccccccCCCCCcchhhhhhhhhhc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGLFG----LYHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGLi~----~~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
-.+|||+|||.|.++.+|++++ |+.+.+.+.......+.+...|+.. ...|+.+.++..+..||+|.++..|.
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA 111 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSH
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCC
Confidence 3589999999999999888764 4555544332222222333345432 23333333344557899999876553
Q ss_pred ccccccchhHHHHhhh--hcccCCcEEEEeccH
Q 027471 144 TIKKRCSLKAVVAEVD--RILRPDGNLILRDDA 174 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~D--RILRPgG~~ii~D~~ 174 (223)
. ...+.++.++. |+|+|||.+++....
T Consensus 112 ~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 112 K----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp H----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred c----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 2 12345666665 999999999998544
No 144
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.61 E-value=4.4e-09 Score=84.44 Aligned_cols=125 Identities=13% Similarity=0.048 Sum_probs=74.3
Q ss_pred hhHhhhhHHHHHhhhhhhccCCCCCCceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCc--cccc
Q 027471 45 FTADYQHWKNVVSKSYLNGMGINWSFVRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGL--FGLY 119 (223)
Q Consensus 45 f~~D~~~W~~~v~~~Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGL--i~~~ 119 (223)
+...++...+.+-+ ++.... ...-.+|||+|||+|.++.++++++ |+.+.+.|.......+.+.+.|+ +-++
T Consensus 22 ~rp~~~~~~~~l~~-~l~~~~--~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~ 98 (189)
T 3p9n_A 22 TRPTTDRVRESLFN-IVTARR--DLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLR 98 (189)
T ss_dssp C---CHHHHHHHHH-HHHHHS--CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEE
T ss_pred CccCcHHHHHHHHH-HHHhcc--CCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEE
Confidence 33444555555544 443321 1224579999999999999776653 66666655433222333334465 2222
Q ss_pred c-cccccCCCC-CcchhhhhhhhhhcccccccchhHHHHhhhh--cccCCcEEEEeccH
Q 027471 120 H-DWCESFNTY-PRTYDLLHADHLFSTIKKRCSLKAVVAEVDR--ILRPDGNLILRDDA 174 (223)
Q Consensus 120 ~-dwce~f~ty-PrtyDllH~~~lfs~~~~rC~i~~vl~E~DR--ILRPgG~~ii~D~~ 174 (223)
+ |..+....+ +.+||+|-++..|.... ...+.++.++.| +|+|||.+++....
T Consensus 99 ~~d~~~~~~~~~~~~fD~i~~~~p~~~~~--~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 99 RGAVAAVVAAGTTSPVDLVLADPPYNVDS--ADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp ESCHHHHHHHCCSSCCSEEEECCCTTSCH--HHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EccHHHHHhhccCCCccEEEECCCCCcch--hhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 2 222222224 48999999987666532 235689999998 99999999997543
No 145
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.61 E-value=2.4e-08 Score=89.17 Aligned_cols=97 Identities=15% Similarity=0.117 Sum_probs=62.4
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCcc---cccccccccCCCCC-cchhhhhhhhhhc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGLF---GLYHDWCESFNTYP-RTYDLLHADHLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGLi---~~~~dwce~f~tyP-rtyDllH~~~lfs 143 (223)
-.+|||+|||+|.++..+++.+ |+.+.+++ ......+.+.+.|+- -+++.-.+.+ .+| .+||+|-|..+..
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV-HLPVEKVDVIISEWMGY 142 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSCSCEEEEEECCCBT
T ss_pred CCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh-cCCCCcEEEEEEcCchh
Confidence 4589999999999999988764 55566543 222233334445652 2333212222 255 8999999875322
Q ss_pred ccccccchhHHHHhhhhcccCCcEEE
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLI 169 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~i 169 (223)
...+.-.++.+|.++.|+|||||.++
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 22222335679999999999999998
No 146
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.59 E-value=1.8e-08 Score=84.10 Aligned_cols=107 Identities=13% Similarity=0.139 Sum_probs=69.3
Q ss_pred ceEEEeeCCchHHHHHHhhCC---C--eEEEEecCCCCCCChhhHHhhCccc----ccccccccCCCCC-cchhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL---K--VWVMNVVPIESPDTLPIIYERGLFG----LYHDWCESFNTYP-RTYDLLHADH 140 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~---~--V~vmnv~p~~~~~~l~~i~eRGLi~----~~~dwce~f~tyP-rtyDllH~~~ 140 (223)
-.+|||+|||.|.++.+|++. + |+.+.+.|.......+.+.+.|+.. ...|..+ .++ .+||+|-++
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~~D~v~~~- 169 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE---GIEEENVDHVILD- 169 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG---CCCCCSEEEEEEC-
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh---ccCCCCcCEEEEC-
Confidence 457999999999999998766 3 4455443332111222333347644 2333332 255 789998774
Q ss_pred hhcccccccchhHHHHhhhhcccCCcEEEEecc-HHHHHHHHHHHHhCC
Q 027471 141 LFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKSLH 188 (223)
Q Consensus 141 lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~-~~~~~~i~~i~~~l~ 188 (223)
-.....++.++.|+|||||.+++..+ .+...++.+.++...
T Consensus 170 -------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 -------LPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -------CCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 22235789999999999999998754 445666666666665
No 147
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.58 E-value=1.6e-08 Score=89.62 Aligned_cols=98 Identities=13% Similarity=0.107 Sum_probs=64.9
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCccc---ccccccccCCCCC-cchhhhhhhhhhc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGLFG---LYHDWCESFNTYP-RTYDLLHADHLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGLi~---~~~dwce~f~tyP-rtyDllH~~~lfs 143 (223)
-.+|||+|||.|.++..+++.+ |+.+..++ ......+.+.+.|+-. +++.-.+.++ +| ..||+|.|..+..
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWMGY 116 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCCBT
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCchh
Confidence 3589999999999999888764 55565542 1112333444557633 3332122222 45 8999999976544
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEE
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLIL 170 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii 170 (223)
...+.-.++.++.+++|+|+|||.++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 444444567899999999999999984
No 148
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.58 E-value=6.9e-09 Score=86.09 Aligned_cols=97 Identities=15% Similarity=0.242 Sum_probs=59.0
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhh-Cccccccccccc--CCCCCcchhhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYER-GLFGLYHDWCES--FNTYPRTYDLLHADHLF 142 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eR-GLi~~~~dwce~--f~tyPrtyDllH~~~lf 142 (223)
-.+|||+|||+|.++..|+++ .|+.+.++|......++.+.++ ++--...|..+. ++..+.+||+|.|+..
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~- 156 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA- 156 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC-
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC-
Confidence 458999999999999998764 4666666543212233333332 222123332221 2223478999998532
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
..+ ....++.++-|+|||||.++++-
T Consensus 157 --~~~--~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 157 --QPD--QTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp --CTT--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --Ccc--HHHHHHHHHHHHcCCCeEEEEEE
Confidence 111 11355778999999999999973
No 149
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.58 E-value=1.3e-08 Score=88.38 Aligned_cols=101 Identities=10% Similarity=0.099 Sum_probs=67.9
Q ss_pred CCceEEEeeCCch---HHHHHHhhC----CCeEEEEecCCCCCCChhhHHhh----Cccccc-cccccc-----C----C
Q 027471 69 SFVRNVMDMRAVY---GGFAAALKD----LKVWVMNVVPIESPDTLPIIYER----GLFGLY-HDWCES-----F----N 127 (223)
Q Consensus 69 ~~iRnvLDmgaG~---GgFAA~L~~----~~V~vmnv~p~~~~~~l~~i~eR----GLi~~~-~dwce~-----f----~ 127 (223)
..++.|||+|||+ |.++..+.. ..|+.+.++|. .++.+.++ +-+..+ .|..+. . .
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~----~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 151 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPM----VLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRR 151 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHH----HHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChH----HHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhc
Confidence 3578999999999 988766543 35777777654 33333222 222222 221110 0 1
Q ss_pred CCC-cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 128 TYP-RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 128 tyP-rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
++| .+||++-+..+|+++.+. ....+|.|+-|+|||||+|++++..
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred cCCCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEec
Confidence 355 589999999999988764 5679999999999999999998543
No 150
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.57 E-value=2.9e-08 Score=88.61 Aligned_cols=99 Identities=10% Similarity=0.137 Sum_probs=65.4
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCcccccccccccCCC--CCcchhhhhhhhhhccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT--YPRTYDLLHADHLFSTI 145 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t--yPrtyDllH~~~lfs~~ 145 (223)
-.+|||+|||.|.++..+++.+ |+.+..++ ......+.+.+.|+..-+.=.+..+.. .|..||+|-|..++.++
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~~~ 129 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYML 129 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBTTB
T ss_pred cCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchhcC
Confidence 4589999999999999887764 55555543 221133333444663211111233333 45789999998777766
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEe
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
.+. .+...+.++.|+|+|||.+++.
T Consensus 130 ~~~-~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 130 FNE-RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTT-SHHHHHHHGGGGEEEEEEEESC
T ss_pred ChH-HHHHHHHHHHhhcCCCeEEEEe
Confidence 532 3457788999999999999965
No 151
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.56 E-value=6.3e-08 Score=82.86 Aligned_cols=118 Identities=10% Similarity=0.084 Sum_probs=72.6
Q ss_pred CceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHh---hCcc---cccccccccCCC---------CC
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYE---RGLF---GLYHDWCESFNT---------YP 130 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~e---RGLi---~~~~dwce~f~t---------yP 130 (223)
.-.+|||+|||.|.++..|+++ .|+.+.+.|.......+.+.. .|+- -+++ ..+.. ++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~---~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLE---ADVTLRAKARVEAGLP 112 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEE---CCTTCCHHHHHHTTCC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEe---CCHHHHhhhhhhhccC
Confidence 3468999999999999888765 355555544322111111111 3442 2333 23332 33
Q ss_pred -cchhhhhhhhhhccc---------------ccccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCee
Q 027471 131 -RTYDLLHADHLFSTI---------------KKRCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDV 191 (223)
Q Consensus 131 -rtyDllH~~~lfs~~---------------~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~ 191 (223)
.+||+|-|.--|... ...+.++.++.++-|+|||||.+++--..+....+...++.- +..
T Consensus 113 ~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp TTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 789999987333221 234567899999999999999999876666666666666653 653
No 152
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.56 E-value=2.1e-08 Score=82.13 Aligned_cols=130 Identities=18% Similarity=0.141 Sum_probs=76.7
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc---cc-ccccccCCCCC-----cchhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG---LY-HDWCESFNTYP-----RTYDLL 136 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~---~~-~dwce~f~tyP-----rtyDll 136 (223)
-.+|||+|||.|.++.+|++. .|+++.+.|.......+.+.+.|+.. ++ .|..+.++..+ .+||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 468999999999999999874 46666665442222233333446522 22 22222222222 689998
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH------------HHHHHHHHHH----HhCCCeeEEeecCCCe
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA------------ETIVEVEDLV----KSLHWDVRMIYTNDNQ 200 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~------------~~~~~i~~i~----~~l~W~~~~~~~~~~e 200 (223)
.++.. ......++.++-|+|||||.+++.+.. +....++++. +.=+++..... -.+
T Consensus 150 ~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp--~~d 221 (229)
T 2avd_A 150 VVDAD------KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLP--LGD 221 (229)
T ss_dssp EECSC------STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEEC--STT
T ss_pred EECCC------HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEe--cCC
Confidence 88622 233457899999999999999996421 1223334433 33344443332 246
Q ss_pred eEEEEEec
Q 027471 201 GMLCVHKT 208 (223)
Q Consensus 201 ~~L~~~K~ 208 (223)
.+++++|.
T Consensus 222 Gl~~~~k~ 229 (229)
T 2avd_A 222 GLTLAFKI 229 (229)
T ss_dssp CEEEEEEC
T ss_pred ceEEEEEC
Confidence 78888873
No 153
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.55 E-value=7.7e-10 Score=91.70 Aligned_cols=97 Identities=15% Similarity=0.133 Sum_probs=64.5
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcc---cccc-cccccCCCCCcchhhhhhhhhhcc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLF---GLYH-DWCESFNTYPRTYDLLHADHLFST 144 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi---~~~~-dwce~f~tyPrtyDllH~~~lfs~ 144 (223)
-.+|||+|||.|+++..|++.+ |+.+.++|.......+.+...|+. -+++ |.. .++ -+.+||+|.++..|++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFL-LLA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH-HHG-GGCCCSEEEECCCCSS
T ss_pred CCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChH-Hhc-ccCCCCEEEECCCcCC
Confidence 4589999999999999998875 555555544322233334444652 2222 221 222 2389999999988876
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEec
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
.... ...+.|+.|+|+|||.+++..
T Consensus 157 ~~~~---~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 157 PDYA---TAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp GGGG---GSSSBCTTTSCSSCHHHHHHH
T ss_pred cchh---hhHHHHHHhhcCCcceeHHHH
Confidence 5543 246779999999999988764
No 154
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.55 E-value=1e-08 Score=82.98 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=61.7
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHh----hCccc--ccccccccCCCC--Cc
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYE----RGLFG--LYHDWCESFNTY--PR 131 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~e----RGLi~--~~~dwce~f~ty--Pr 131 (223)
+.+.+. .-.+|||+|||.|.+++.|.+.+ |+.+.+.|. .++.+.+ .|+.. +++. ..+... +.
T Consensus 71 ~~l~~~--~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~----~~~~a~~~~~~~~~~~v~~~~~--d~~~~~~~~~ 142 (210)
T 3lbf_A 71 ELLELT--PQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKG----LQWQARRRLKNLDLHNVSTRHG--DGWQGWQARA 142 (210)
T ss_dssp HHTTCC--TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHH----HHHHHHHHHHHTTCCSEEEEES--CGGGCCGGGC
T ss_pred HhcCCC--CCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHH----HHHHHHHHHHHcCCCceEEEEC--CcccCCccCC
Confidence 344443 34689999999999999998764 555555443 3333333 35532 2221 122222 37
Q ss_pred chhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 132 TYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 132 tyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
+||+|.+...+.+..+ ++-|+|||||.+++.-..
T Consensus 143 ~~D~i~~~~~~~~~~~---------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 143 PFDAIIVTAAPPEIPT---------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CEEEEEESSBCSSCCT---------HHHHTEEEEEEEEEEECS
T ss_pred CccEEEEccchhhhhH---------HHHHhcccCcEEEEEEcC
Confidence 9999999866655443 678999999999997543
No 155
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.55 E-value=3.3e-08 Score=81.13 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=61.6
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhh----Cccc-ccccccccCCCCCcchh
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYER----GLFG-LYHDWCESFNTYPRTYD 134 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eR----GLi~-~~~dwce~f~tyPrtyD 134 (223)
+.+.+.. -.+|||+|||.|.++..|.+.. |+.+.+.|. .++.+.++ |-+- ...|..+.++ .+.+||
T Consensus 64 ~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~----~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD 136 (231)
T 1vbf_A 64 DELDLHK--GQKVLEIGTGIGYYTALIAEIVDKVVSVEINEK----MYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYD 136 (231)
T ss_dssp HHTTCCT--TCEEEEECCTTSHHHHHHHHHSSEEEEEESCHH----HHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEE
T ss_pred HhcCCCC--CCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHH----HHHHHHHHHhhcCCeEEEECCcccccc-cCCCcc
Confidence 3444433 3489999999999999998764 555555433 34444333 2122 2233222111 237899
Q ss_pred hhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 135 LLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 135 llH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
+|.+...+.+.. -++-|+|||||.+++....
T Consensus 137 ~v~~~~~~~~~~---------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 137 RVVVWATAPTLL---------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EEEESSBBSSCC---------HHHHHTEEEEEEEEEEECS
T ss_pred EEEECCcHHHHH---------HHHHHHcCCCcEEEEEEcC
Confidence 999987665443 4789999999999998543
No 156
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.54 E-value=8.3e-09 Score=84.68 Aligned_cols=127 Identities=9% Similarity=0.055 Sum_probs=72.0
Q ss_pred eEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCc----ccccc-cccccCCCC-Ccc-hhhhhhhhh
Q 027471 72 RNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGL----FGLYH-DWCESFNTY-PRT-YDLLHADHL 141 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGL----i~~~~-dwce~f~ty-Prt-yDllH~~~l 141 (223)
.+|||+|||+|.++..++.++ |+.+.++|.......+.+...|+ +-++. |..+.++.. +.+ ||+|-++..
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~ 134 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPP 134 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCC
Confidence 479999999999998765553 55555544322212222233454 22222 322222333 478 999998766
Q ss_pred hcccccccchhHHHHhh--hhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeEEeecCCCeeEEEEEe
Q 027471 142 FSTIKKRCSLKAVVAEV--DRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 207 (223)
Q Consensus 142 fs~~~~rC~i~~vl~E~--DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K 207 (223)
|. .-..+.++.++ -|+|||||.+++....... ... .-.|.......-+...+.+.+|
T Consensus 135 ~~----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~~---~~~--~~~~~~~~~~~yG~~~~~~~~~ 193 (201)
T 2ift_A 135 FH----FNLAEQAISLLCENNWLKPNALIYVETEKDKP---LIT--PENWTLLKEKTTGIVSYRLYQN 193 (201)
T ss_dssp SS----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSSC---CCC--CTTEEEEEEEEETTEEEEEEEE
T ss_pred CC----CccHHHHHHHHHhcCccCCCcEEEEEECCCCC---ccc--cchhHHHHHHhcCCEEEEEEec
Confidence 54 12345778888 7899999999998554431 110 1235543322334556666555
No 157
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.54 E-value=3.2e-08 Score=83.20 Aligned_cols=113 Identities=12% Similarity=0.143 Sum_probs=67.5
Q ss_pred CceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh------------Cccc--c-cccccccCCC-C
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER------------GLFG--L-YHDWCESFNT-Y 129 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR------------GLi~--~-~~dwce~f~t-y 129 (223)
.-..|||+|||+|+|+..|++. .|+.+.+++. .++.+.++ |+.. + ..|..+.++. +
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~----~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQ----VTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFF 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHH----HHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTS
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHH----HHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhc
Confidence 3468999999999999988764 4666666544 22222221 5532 2 2232222332 4
Q ss_pred C-cchhhhhhhhhhcc-c------ccccchhHHHHhhhhcccCCcEEEE-eccHHHHHHHHHHHHhCC
Q 027471 130 P-RTYDLLHADHLFST-I------KKRCSLKAVVAEVDRILRPDGNLIL-RDDAETIVEVEDLVKSLH 188 (223)
Q Consensus 130 P-rtyDllH~~~lfs~-~------~~rC~i~~vl~E~DRILRPgG~~ii-~D~~~~~~~i~~i~~~l~ 188 (223)
+ .++|.|... |.. + ..|-....++.++.|+|+|||.+++ +|.....+.+.+.+..-.
T Consensus 125 ~~~~~d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 190 (246)
T 2vdv_E 125 EKGQLSKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHP 190 (246)
T ss_dssp CTTCEEEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHST
T ss_pred cccccCEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCc
Confidence 4 777776532 211 1 1121225899999999999999988 566666666665554443
No 158
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.54 E-value=3.1e-08 Score=82.99 Aligned_cols=130 Identities=14% Similarity=0.148 Sum_probs=76.9
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc---c-cccccccCCCCC-----cchhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG---L-YHDWCESFNTYP-----RTYDLL 136 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~---~-~~dwce~f~tyP-----rtyDll 136 (223)
-++|||+|||.|.++.+|++. .|+.+.+.|.......+.+.+.|+.. + ..|..+.++.++ .+||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 358999999999999999875 35666654432222223333346632 2 222222223332 789999
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH------------HHHHHHHHHHHhC----CCeeEEeecCCCe
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA------------ETIVEVEDLVKSL----HWDVRMIYTNDNQ 200 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~------------~~~~~i~~i~~~l----~W~~~~~~~~~~e 200 (223)
.++.. .-....++.++-|+|||||.+++.+.. .....++++.+.+ ++...... -.+
T Consensus 153 ~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp--~~d 224 (232)
T 3cbg_A 153 FIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIP--LGD 224 (232)
T ss_dssp EECSC------GGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEEC--SBT
T ss_pred EECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEE--cCC
Confidence 87632 123457899999999999999997332 1233444444433 44443322 245
Q ss_pred eEEEEEec
Q 027471 201 GMLCVHKT 208 (223)
Q Consensus 201 ~~L~~~K~ 208 (223)
.+.+++|+
T Consensus 225 G~~~~~~~ 232 (232)
T 3cbg_A 225 GMTLALKK 232 (232)
T ss_dssp CEEEEEEC
T ss_pred eEEEEEeC
Confidence 68888774
No 159
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.54 E-value=9e-09 Score=81.07 Aligned_cols=100 Identities=12% Similarity=0.101 Sum_probs=62.4
Q ss_pred ceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcc---ccc-ccccccCCCC---Ccchhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLF---GLY-HDWCESFNTY---PRTYDLLHADH 140 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi---~~~-~dwce~f~ty---PrtyDllH~~~ 140 (223)
-.+|||+|||.|.++.+++++ .|+.+.+.|.......+.+...|+. -++ .|+.+.++.. +.+||+|-++.
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~ 124 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDP 124 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECC
Confidence 358999999999999877665 3666666554332223333344552 222 3333322222 57899999876
Q ss_pred hhcccccccchhHHHHhh--hhcccCCcEEEEeccH
Q 027471 141 LFSTIKKRCSLKAVVAEV--DRILRPDGNLILRDDA 174 (223)
Q Consensus 141 lfs~~~~rC~i~~vl~E~--DRILRPgG~~ii~D~~ 174 (223)
.|... ..+.++.++ .|+|+|||.+++....
T Consensus 125 ~~~~~----~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 125 PYAKQ----EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CGGGC----CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCch----hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 65521 234555555 9999999999997443
No 160
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.53 E-value=2.4e-08 Score=91.44 Aligned_cols=150 Identities=15% Similarity=0.097 Sum_probs=85.8
Q ss_pred HhhhhHHHHHhhhhhhccCCCCCCceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcc-ccccccc
Q 027471 47 ADYQHWKNVVSKSYLNGMGINWSFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLF-GLYHDWC 123 (223)
Q Consensus 47 ~D~~~W~~~v~~~Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi-~~~~dwc 123 (223)
..++...+.+.+ +.. .....-.+|||+|||+|.++..|.+++ |+.+.+.+..-....+.+.+.|+- -+++.
T Consensus 214 ~~t~~ll~~l~~-~l~---~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~-- 287 (381)
T 3dmg_A 214 PASLLLLEALQE-RLG---PEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHS-- 287 (381)
T ss_dssp HHHHHHHHHHHH-HHC---TTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEEC--
T ss_pred HHHHHHHHHHHH-hhc---ccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEc--
Confidence 445555555543 321 111234589999999999999998875 455555443222122223334432 22222
Q ss_pred ccCCC-CC-cchhhhhhhhhhccccc--ccchhHHHHhhhhcccCCcEEEEeccHH--HHHHHHHHHHhCCCeeEEeecC
Q 027471 124 ESFNT-YP-RTYDLLHADHLFSTIKK--RCSLKAVVAEVDRILRPDGNLILRDDAE--TIVEVEDLVKSLHWDVRMIYTN 197 (223)
Q Consensus 124 e~f~t-yP-rtyDllH~~~lfs~~~~--rC~i~~vl~E~DRILRPgG~~ii~D~~~--~~~~i~~i~~~l~W~~~~~~~~ 197 (223)
..+.. .+ .+||+|-|...|+.... .-....++.++-|+|||||.+++..... ....+++.+. ++... .+
T Consensus 288 D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~----~v~~l-~~ 362 (381)
T 3dmg_A 288 DVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG----AFQTL-KV 362 (381)
T ss_dssp STTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS----CCEEE-EE
T ss_pred chhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc----cEEEE-eC
Confidence 12222 23 79999999888875332 2234589999999999999999974433 3344444443 23332 33
Q ss_pred CCeeEEEEEe
Q 027471 198 DNQGMLCVHK 207 (223)
Q Consensus 198 ~~e~~L~~~K 207 (223)
.+=+|+-+.|
T Consensus 363 ~gF~Vl~a~~ 372 (381)
T 3dmg_A 363 AEYKVLFAEK 372 (381)
T ss_dssp SSSEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 4445555544
No 161
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.52 E-value=4.6e-09 Score=81.38 Aligned_cols=99 Identities=11% Similarity=0.052 Sum_probs=59.1
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCc-cccc-ccccccCCCCC---cchhhhhhhhhhc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGL-FGLY-HDWCESFNTYP---RTYDLLHADHLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGL-i~~~-~dwce~f~tyP---rtyDllH~~~lfs 143 (223)
-.+|||+|||+|.++.+|.+++ |+.+.+.|.......+.+...|+ +-++ .|+.+.++.++ .+||+|.+...|.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA 121 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc
Confidence 3579999999999999998774 44444433221112222233443 1122 22222222222 3899999987776
Q ss_pred ccccccchhHHHHhhh--hcccCCcEEEEeccH
Q 027471 144 TIKKRCSLKAVVAEVD--RILRPDGNLILRDDA 174 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~D--RILRPgG~~ii~D~~ 174 (223)
. ..+.++.++- |+|+|||.+++....
T Consensus 122 --~---~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 122 --M---DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp --S---CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred --h---hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 2 2335566666 999999999997543
No 162
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.52 E-value=1.1e-08 Score=83.42 Aligned_cols=118 Identities=10% Similarity=0.080 Sum_probs=68.5
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCC----ChhhHHhhCccc--ccccccccCCCCCcchhhhhhh-
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPD----TLPIIYERGLFG--LYHDWCESFNTYPRTYDLLHAD- 139 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~----~l~~i~eRGLi~--~~~dwce~f~tyPrtyDllH~~- 139 (223)
-.+|||+|||+|.++..|+++ .|+.+.+++..-.. ..+....+|+.. .++.-.+.++..+.+ |.+...
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~ 106 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLM 106 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEES
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEc
Confidence 467999999999999999876 35666665541110 011122355532 222222234432244 655421
Q ss_pred --hhhc--ccccccchhHHHHhhhhcccCCcEEEEecc------------------HHH-HHHHHHHHHhCCCeeE
Q 027471 140 --HLFS--TIKKRCSLKAVVAEVDRILRPDGNLILRDD------------------AET-IVEVEDLVKSLHWDVR 192 (223)
Q Consensus 140 --~lfs--~~~~rC~i~~vl~E~DRILRPgG~~ii~D~------------------~~~-~~~i~~i~~~l~W~~~ 192 (223)
.... +..+ ...+|.|+.|+|||||.++++.. ... .+.+.+++..--|++.
T Consensus 107 ~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~ 179 (218)
T 3mq2_A 107 PWGSLLRGVLGS---SPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLA 179 (218)
T ss_dssp CCHHHHHHHHTS---SSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEE
T ss_pred cchhhhhhhhcc---HHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCce
Confidence 1110 1111 15899999999999999999621 111 2347778888888765
No 163
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.51 E-value=2.1e-08 Score=89.47 Aligned_cols=95 Identities=13% Similarity=0.198 Sum_probs=64.1
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC--CeEE--EEecCCCCCCChhhHHh-hCcccccccccccCCCCCcchhhhhhhhhh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL--KVWV--MNVVPIESPDTLPIIYE-RGLFGLYHDWCESFNTYPRTYDLLHADHLF 142 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~--~V~v--mnv~p~~~~~~l~~i~e-RGLi~~~~dwce~f~tyPrtyDllH~~~lf 142 (223)
.....+|||+|||.|.++.+|.++ ++.+ +.+ |.. ++.+.+ .++--+.+| .|..+|. ||++.+.+++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~----~~~a~~~~~v~~~~~d---~~~~~~~-~D~v~~~~~l 277 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQV----IENAPPLSGIEHVGGD---MFASVPQ-GDAMILKAVC 277 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHH----HTTCCCCTTEEEEECC---TTTCCCC-EEEEEEESSG
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHH----HHhhhhcCCCEEEeCC---cccCCCC-CCEEEEeccc
Confidence 345689999999999999999875 3444 454 321 111111 122113333 2233555 9999999999
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+++.+. ....+|.++-|+|||||.+++.|
T Consensus 278 h~~~d~-~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 278 HNWSDE-KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp GGSCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 988753 23589999999999999999974
No 164
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.51 E-value=1.7e-08 Score=83.48 Aligned_cols=92 Identities=13% Similarity=0.160 Sum_probs=60.7
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh----Ccc---c-ccccccccCCCC--Ccchhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER----GLF---G-LYHDWCESFNTY--PRTYDLL 136 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR----GLi---~-~~~dwce~f~ty--PrtyDll 136 (223)
-.+|||+|||.|.++.+|++. .|+++.+.|. .++.+.++ |+. . ...|..+.++.. +.+||+|
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDER----RYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHH----HHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHH----HHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEE
Confidence 358999999999999998765 3555544333 33333333 652 2 222322222223 5789999
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
.+...++ ....++.++-|+|||||.+++.+
T Consensus 131 ~~~~~~~------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 131 FIDAAKG------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEGGGS------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred EECCCHH------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 8864432 34688999999999999999985
No 165
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.51 E-value=7.4e-08 Score=86.47 Aligned_cols=95 Identities=13% Similarity=0.169 Sum_probs=64.8
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCccc-ccccccccCCCCCcchhhhhhhhhh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYPRTYDLLHADHLF 142 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~-~~~dwce~f~tyPrtyDllH~~~lf 142 (223)
....++|||+|||.|.++..|+++ .++++.+ |.. ++.+.++.-+- +.+| .|..+|.. |++.+..++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~----~~~a~~~~~v~~~~~d---~~~~~p~~-D~v~~~~vl 271 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHV----IQDAPAFSGVEHLGGD---MFDGVPKG-DAIFIKWIC 271 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHH----HTTCCCCTTEEEEECC---TTTCCCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHH----HHhhhhcCCCEEEecC---CCCCCCCC-CEEEEechh
Confidence 456789999999999999999764 3455554 221 11111111122 3333 33346654 999999999
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+++.+. ....+|.++-|+|||||.+++.|
T Consensus 272 h~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 272 HDWSDE-HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp GGBCHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCCHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 988753 23589999999999999999974
No 166
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.51 E-value=7.8e-09 Score=97.18 Aligned_cols=110 Identities=12% Similarity=0.184 Sum_probs=72.7
Q ss_pred ceEEEeeCCc------hHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCC------Ccch
Q 027471 71 VRNVMDMRAV------YGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTY------PRTY 133 (223)
Q Consensus 71 iRnvLDmgaG------~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~ty------Prty 133 (223)
-.+|||+||| +||.+..|.++ .|+.+.++|.... .... +-++..-++.+++- +.+|
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~------~~~r-I~fv~GDa~dlpf~~~l~~~d~sF 289 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV------DELR-IRTIQGDQNDAEFLDRIARRYGPF 289 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG------CBTT-EEEEECCTTCHHHHHHHHHHHCCE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh------cCCC-cEEEEecccccchhhhhhcccCCc
Confidence 4789999999 67776666543 5777888776421 0111 22222212232222 4899
Q ss_pred hhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH------------------HHHHHHHHHHHhCCCee
Q 027471 134 DLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA------------------ETIVEVEDLVKSLHWDV 191 (223)
Q Consensus 134 DllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~------------------~~~~~i~~i~~~l~W~~ 191 (223)
|+|.|+.. +.. ......|.|+-|+|||||.+++.|.. ..++.+++++..++|.-
T Consensus 290 DlVisdgs--H~~--~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~ 361 (419)
T 3sso_A 290 DIVIDDGS--HIN--AHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQE 361 (419)
T ss_dssp EEEEECSC--CCH--HHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGGG
T ss_pred cEEEECCc--ccc--hhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcccc
Confidence 99998643 221 23468899999999999999997443 24788889988888764
No 167
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.49 E-value=4.8e-08 Score=81.01 Aligned_cols=107 Identities=16% Similarity=0.122 Sum_probs=68.6
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhh-----Ccc--cc-cccccccCCCCC-cchhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYER-----GLF--GL-YHDWCESFNTYP-RTYDLL 136 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eR-----GLi--~~-~~dwce~f~tyP-rtyDll 136 (223)
-.+|||+|||.|.++.+|++. .|+.+.+.|. .++.+.++ |.. -+ ..|..+. .++ .+||+|
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~----~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~~~D~v 170 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPH----HLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEAAYDGV 170 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHH----HHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTTCEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHH----HHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCCCcCEE
Confidence 458999999999999988765 3555555433 33333333 531 12 2232221 144 789998
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccHH-HHHHHHHHHHhCCCee
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE-TIVEVEDLVKSLHWDV 191 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~-~~~~i~~i~~~l~W~~ 191 (223)
-++ --....++.++.|+|||||.+++..... ...++.+.++...|..
T Consensus 171 ~~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 171 ALD--------LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRL 218 (258)
T ss_dssp EEE--------SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEE
T ss_pred EEC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 774 1223488999999999999999986654 4555555565555553
No 168
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.48 E-value=3.1e-08 Score=83.27 Aligned_cols=90 Identities=14% Similarity=0.177 Sum_probs=60.2
Q ss_pred CceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCc-ccc-cccccccCCCCCcchhhhhhhhhhc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGL-FGL-YHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGL-i~~-~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
.-.+|||+|||.|.++..|.+. .|+.+.+++. .++.+.+++- +.. ..|. +.++.-+.+||+|.|...
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~-- 157 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKV----AIKAAAKRYPQVTFCVASS-HRLPFSDTSMDAIIRIYA-- 157 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHH----HHHHHHHHCTTSEEEECCT-TSCSBCTTCEEEEEEESC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHH----HHHHHHHhCCCcEEEEcch-hhCCCCCCceeEEEEeCC--
Confidence 3457999999999999999875 3555555433 5566666652 111 2221 223323389999987522
Q ss_pred ccccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 144 TIKKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 144 ~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
...+.|+.|+|||||.+++.+..
T Consensus 158 --------~~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 158 --------PCKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp --------CCCHHHHHHHEEEEEEEEEEEEC
T ss_pred --------hhhHHHHHHhcCCCcEEEEEEcC
Confidence 24689999999999999998543
No 169
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.47 E-value=5.3e-08 Score=85.09 Aligned_cols=131 Identities=10% Similarity=0.122 Sum_probs=81.8
Q ss_pred eEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcc---c-ccccccccCCCCCcch---hhhhhhhh
Q 027471 72 RNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLF---G-LYHDWCESFNTYPRTY---DLLHADHL 141 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi---~-~~~dwce~f~tyPrty---DllH~~~l 141 (223)
.+|||+|||.|.++.+|++. .|+.+.+++..-....+.+...|+- - ...||.+. .+.+| |+|-|.--
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~---~~~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---FKEKFASIEMILSNPP 201 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---GGGGTTTCCEEEECCC
T ss_pred CEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh---cccccCCCCEEEEcCC
Confidence 47999999999999999765 4666666554322122223334653 2 23344332 34678 99877521
Q ss_pred hcc-----------ccc-----ccchhHHHHhhh-hcccCCcEEEEeccHHHHHHHHHHHHhCCCeeEEeecCCCeeEEE
Q 027471 142 FST-----------IKK-----RCSLKAVVAEVD-RILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLC 204 (223)
Q Consensus 142 fs~-----------~~~-----rC~i~~vl~E~D-RILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~L~ 204 (223)
+.. ... .+.-..++.++- |.|+|||++++.-.......+.++++.. ....|-.+.+++++
T Consensus 202 yi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~---~~~~D~~g~~R~~~ 278 (284)
T 1nv8_A 202 YVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT---VFLKDSAGKYRFLL 278 (284)
T ss_dssp CBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC---EEEECTTSSEEEEE
T ss_pred CCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC---CeecccCCCceEEE
Confidence 111 100 011127888999 9999999999985555556677666554 33445567889988
Q ss_pred EEec
Q 027471 205 VHKT 208 (223)
Q Consensus 205 ~~K~ 208 (223)
++++
T Consensus 279 ~~~k 282 (284)
T 1nv8_A 279 LNRR 282 (284)
T ss_dssp EECC
T ss_pred EEEc
Confidence 8775
No 170
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.47 E-value=4.3e-08 Score=79.57 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=61.1
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc--c-cccccccCCCC--Cc
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG--L-YHDWCESFNTY--PR 131 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~--~-~~dwce~f~ty--Pr 131 (223)
+.+.+.. -.+|||+|||.|.+++.|.+. .|+.+.+.|.......+...+.|+.. . ..|. ...+ +.
T Consensus 71 ~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~ 145 (215)
T 2yxe_A 71 ELLDLKP--GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDG---TLGYEPLA 145 (215)
T ss_dssp HHTTCCT--TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCG---GGCCGGGC
T ss_pred HhhCCCC--CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc---ccCCCCCC
Confidence 3444433 358999999999999988764 46666654432211222222234432 1 1222 2223 37
Q ss_pred chhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 132 TYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 132 tyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
+||+|.+...+.+.. -++-|+|||||.+++.-..
T Consensus 146 ~fD~v~~~~~~~~~~---------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIP---------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp CEEEEEESSBBSSCC---------HHHHHTEEEEEEEEEEESS
T ss_pred CeeEEEECCchHHHH---------HHHHHHcCCCcEEEEEECC
Confidence 899999986665443 3889999999999998543
No 171
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.46 E-value=4.5e-08 Score=83.81 Aligned_cols=107 Identities=10% Similarity=0.035 Sum_probs=68.7
Q ss_pred CceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhh-----Cccc---ccccccccCCCCC-cchhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYER-----GLFG---LYHDWCESFNTYP-RTYDL 135 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eR-----GLi~---~~~dwce~f~tyP-rtyDl 135 (223)
.-.+|||+|||.|+++..|++. .|+.+.+.|. .++.+.++ |+.. ...|.. ..++ .+||+
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~----~~~~a~~~~~~~~g~~~v~~~~~d~~---~~~~~~~fD~ 182 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDED----NLKKAMDNLSEFYDIGNVRTSRSDIA---DFISDQMYDA 182 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHH----HHHHHHHHHHTTSCCTTEEEECSCTT---TCCCSCCEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHH----HHHHHHHHHHhcCCCCcEEEEECchh---ccCcCCCccE
Confidence 3468999999999999998765 3555544332 33333333 5422 222322 2344 78999
Q ss_pred hhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccHH-HHHHHHHHHHhCCCee
Q 027471 136 LHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE-TIVEVEDLVKSLHWDV 191 (223)
Q Consensus 136 lH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~-~~~~i~~i~~~l~W~~ 191 (223)
|-+. .. ....+|.++-|+|||||.+++.+... ...++.+.++...|..
T Consensus 183 Vi~~-----~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 183 VIAD-----IP---DPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp EEEC-----CS---CGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred EEEc-----Cc---CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 8773 11 23588999999999999999987654 4556655555555554
No 172
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.46 E-value=1e-08 Score=84.12 Aligned_cols=93 Identities=18% Similarity=0.180 Sum_probs=57.1
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCc-------cc-ccccccccCCCCCcchhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGL-------FG-LYHDWCESFNTYPRTYDLLH 137 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGL-------i~-~~~dwce~f~tyPrtyDllH 137 (223)
-.+|||+|||.|.+++.|++. .|+.+.+.|.......+.+.+.|+ +- ...|..+. ..-+.+||+|+
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~i~ 156 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEAPYDAIH 156 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGCCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-cccCCCcCEEE
Confidence 358999999999999988753 466666654322211122222232 22 22232211 11237899999
Q ss_pred hhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 138 ADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 138 ~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
+...+ ..++.++-|+|||||.+++...
T Consensus 157 ~~~~~---------~~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 157 VGAAA---------PVVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp ECSBB---------SSCCHHHHHTEEEEEEEEEEES
T ss_pred ECCch---------HHHHHHHHHhcCCCcEEEEEEe
Confidence 87443 3456788999999999999743
No 173
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.46 E-value=1.1e-07 Score=85.36 Aligned_cols=95 Identities=14% Similarity=0.168 Sum_probs=64.9
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCccc-ccccccccCCCCCcchhhhhhhhhh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYPRTYDLLHADHLF 142 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~-~~~dwce~f~tyPrtyDllH~~~lf 142 (223)
.....+|||+|||.|.++.+|+++ .++++.+ |. .++.+.++.-+- +.+| .|..+|.. |++.+..++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~----~~~~a~~~~~v~~~~~D---~~~~~p~~-D~v~~~~vl 269 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PH----VISEAPQFPGVTHVGGD---MFKEVPSG-DTILMKWIL 269 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HH----HHTTCCCCTTEEEEECC---TTTCCCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HH----HHHhhhhcCCeEEEeCC---cCCCCCCC-CEEEehHHh
Confidence 456789999999999999999764 3555555 22 111111111122 3343 33346654 999999999
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+++.+. ....+|.++-|+|||||.+++.|
T Consensus 270 h~~~d~-~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 270 HDWSDQ-HCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp GGSCHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 988642 23689999999999999999974
No 174
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.45 E-value=9.4e-08 Score=79.68 Aligned_cols=131 Identities=17% Similarity=0.194 Sum_probs=75.5
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc---c-cccccccCCCC------------
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG---L-YHDWCESFNTY------------ 129 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~---~-~~dwce~f~ty------------ 129 (223)
-.+|||+|||.|.++..|++. .|+.+.+.|.......+.+.+.|+.. + ..|..+.++.+
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 458999999999999998754 45666654432221222233335532 1 11211111111
Q ss_pred ---C-cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc------------HHHHHHHHHH----HHhCCC
Q 027471 130 ---P-RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD------------AETIVEVEDL----VKSLHW 189 (223)
Q Consensus 130 ---P-rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~------------~~~~~~i~~i----~~~l~W 189 (223)
+ .+||+|.+... .-....++.++-|+|||||.+++.+. ......++++ .+.-++
T Consensus 141 f~~~~~~fD~I~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDAD------KENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLV 214 (239)
T ss_dssp TCCSTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTE
T ss_pred ccCCCCCcCEEEEeCC------HHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCCCe
Confidence 2 68999987622 12345789999999999999999851 1122233333 344445
Q ss_pred eeEEeecCCCeeEEEEEecc
Q 027471 190 DVRMIYTNDNQGMLCVHKTY 209 (223)
Q Consensus 190 ~~~~~~~~~~e~~L~~~K~~ 209 (223)
.+.... -.+.+.+++|++
T Consensus 215 ~~~~~p--~~~g~~~~~~~~ 232 (239)
T 2hnk_A 215 DVSLVP--IADGVSLVRKRL 232 (239)
T ss_dssp EEEEEC--STTCEEEEEECC
T ss_pred EEEEEE--cCCceEeeeehh
Confidence 544332 245688888875
No 175
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.45 E-value=7.8e-08 Score=85.04 Aligned_cols=95 Identities=14% Similarity=0.175 Sum_probs=65.2
Q ss_pred CCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhcc
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFST 144 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~ 144 (223)
....+|||+|||.|.++.+|.++ .++++.+ |.......+ + .++--..+| .|..+|. ||++.+.+++++
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~-~~v~~~~~d---~~~~~p~-~D~v~~~~~lh~ 258 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG--S-NNLTYVGGD---MFTSIPN-ADAVLLKYILHN 258 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC--B-TTEEEEECC---TTTCCCC-CSEEEEESCGGG
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc--C-CCcEEEecc---ccCCCCC-ccEEEeehhhcc
Confidence 34579999999999999999854 4666666 432111111 0 122113333 2334554 999999999998
Q ss_pred cccccchhHHHHhhhhcccC---CcEEEEec
Q 027471 145 IKKRCSLKAVVAEVDRILRP---DGNLILRD 172 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRP---gG~~ii~D 172 (223)
+.+. ....+|.++-|+||| ||.+++.|
T Consensus 259 ~~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 259 WTDK-DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCHH-HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred CCHH-HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 8753 235899999999999 99999974
No 176
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.43 E-value=2.6e-08 Score=83.61 Aligned_cols=45 Identities=9% Similarity=0.170 Sum_probs=33.0
Q ss_pred cchhhhhhhhhhccccc------ccchhHHHHhhhhcccCCcEEEEeccHH
Q 027471 131 RTYDLLHADHLFSTIKK------RCSLKAVVAEVDRILRPDGNLILRDDAE 175 (223)
Q Consensus 131 rtyDllH~~~lfs~~~~------rC~i~~vl~E~DRILRPgG~~ii~D~~~ 175 (223)
..||+|-|...|....+ .-....++.++.|+|+|||++++.+...
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRSR 217 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcch
Confidence 48999998765543322 1234588999999999999999975543
No 177
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.43 E-value=5.2e-08 Score=85.47 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=64.4
Q ss_pred hhccCCCCCCceEEEeeCCchHHHHHHhhCC--C---eEEEEecCCCCCCChhhHHhhCcccccccccccCCC---CCcc
Q 027471 61 LNGMGINWSFVRNVMDMRAVYGGFAAALKDL--K---VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT---YPRT 132 (223)
Q Consensus 61 ~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~--~---V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t---yPrt 132 (223)
++.+++..+ .+|||+|||.|.++..|++. . |+.+.++|.......+.+.+.|+.. +.--+..+.. .+..
T Consensus 68 ~~~l~~~~~--~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~~~~~~ 144 (317)
T 1dl5_A 68 MEWVGLDKG--MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGVPEFSP 144 (317)
T ss_dssp HHHTTCCTT--CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCGGGCC
T ss_pred HHhcCCCCc--CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhccccCCC
Confidence 344555444 58999999999999998765 2 7777765543222223333446643 1111122222 2378
Q ss_pred hhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 133 YDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 133 yDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
||+|.+...+.+.. .++.|+|||||.+++...
T Consensus 145 fD~Iv~~~~~~~~~---------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 145 YDVIFVTVGVDEVP---------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEEEEECSBBSCCC---------HHHHHHEEEEEEEEEEBC
T ss_pred eEEEEEcCCHHHHH---------HHHHHhcCCCcEEEEEEC
Confidence 99999987776543 467899999999999754
No 178
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.42 E-value=1.7e-07 Score=74.08 Aligned_cols=82 Identities=18% Similarity=0.268 Sum_probs=57.5
Q ss_pred Ccchhhhhhhhhhccc-ccccchhHHHHhhhhcccCCcEEEEeccHH----------HHHHHHHHHHhCCCeeEEeecC-
Q 027471 130 PRTYDLLHADHLFSTI-KKRCSLKAVVAEVDRILRPDGNLILRDDAE----------TIVEVEDLVKSLHWDVRMIYTN- 197 (223)
Q Consensus 130 PrtyDllH~~~lfs~~-~~rC~i~~vl~E~DRILRPgG~~ii~D~~~----------~~~~i~~i~~~l~W~~~~~~~~- 197 (223)
+.+||+|.|..++++. .+ .+.+|.|+.|+|||||++++.++.. ....+.+.++.-.+ +......
T Consensus 61 ~~~fD~V~~~~~l~~~~~~---~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~ 136 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTTLH---SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQR 136 (176)
T ss_dssp SSCEEEEEECCSTTCCCCC---CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEE
T ss_pred CCCEeEEEECChhhhcccC---HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCcc
Confidence 3899999998888876 44 3799999999999999999974421 14566666665555 3322100
Q ss_pred ------------------CC---eeEEEEEecccCCCcc
Q 027471 198 ------------------DN---QGMLCVHKTYWRPKET 215 (223)
Q Consensus 198 ------------------~~---e~~L~~~K~~w~~~~~ 215 (223)
.. -.+++|+|+-|..+++
T Consensus 137 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~Kp~~~~gs~ 175 (176)
T 2ld4_A 137 EPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSS 175 (176)
T ss_dssp ECCCHHHHHHHHHHTCCCCSSEEEEEEEEECCCSSCCSC
T ss_pred cCCCHHHHHHHHHHhcccCCceEEEEEeccCCcccccCC
Confidence 01 4578999998876654
No 179
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.41 E-value=1.3e-07 Score=79.65 Aligned_cols=97 Identities=11% Similarity=0.094 Sum_probs=63.2
Q ss_pred CceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc---c-cccccccCCCC------Ccchh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG---L-YHDWCESFNTY------PRTYD 134 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~---~-~~dwce~f~ty------PrtyD 134 (223)
.-++|||+|||.|..+.+|++. .|+.+.+.|.......+.+.+.|+-. + ..|..+.++.+ +.+||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 3468999999999998888643 46666665443222333344557632 2 23333333333 47899
Q ss_pred hhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 135 LLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 135 llH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+|.++.- .-....++.++-|+|||||.+++.+
T Consensus 150 ~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 150 FGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEECSC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCc------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 9887621 1134588999999999999999974
No 180
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.40 E-value=1.8e-07 Score=83.63 Aligned_cols=134 Identities=14% Similarity=0.154 Sum_probs=88.2
Q ss_pred CCCCCceEEEeeCCchHHHHHHhhCC--Ce--EEEEecCCCCCCChhhHHh---hCc---cc-ccccccccCCCCCcchh
Q 027471 66 INWSFVRNVMDMRAVYGGFAAALKDL--KV--WVMNVVPIESPDTLPIIYE---RGL---FG-LYHDWCESFNTYPRTYD 134 (223)
Q Consensus 66 i~~~~iRnvLDmgaG~GgFAA~L~~~--~V--~vmnv~p~~~~~~l~~i~e---RGL---i~-~~~dwce~f~tyPrtyD 134 (223)
++++..++|+|+|||.|.++.+|+++ ++ ++.++ |..++.+.+ .+. +. +-+| .|..-+..+|
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-----p~v~~~a~~~~~~~~~~rv~~~~gD---~~~~~~~~~D 246 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-----PEVVWTAKQHFSFQEEEQIDFQEGD---FFKDPLPEAD 246 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-----HHHHHHHHHHSCC--CCSEEEEESC---TTTSCCCCCS
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-----HHHHHHHHHhhhhcccCceeeecCc---cccCCCCCce
Confidence 45677889999999999999999876 33 34443 222222222 122 21 2333 2333235689
Q ss_pred hhhhhhhhccccc-ccchhHHHHhhhhcccCCcEEEEeccH--------------H------------HHHHHHHHHHhC
Q 027471 135 LLHADHLFSTIKK-RCSLKAVVAEVDRILRPDGNLILRDDA--------------E------------TIVEVEDLVKSL 187 (223)
Q Consensus 135 llH~~~lfs~~~~-rC~i~~vl~E~DRILRPgG~~ii~D~~--------------~------------~~~~i~~i~~~l 187 (223)
++.+.++++.|.+ .| ..+|.++-|.|+|||.++|-|.. + ...+.+++++.-
T Consensus 247 ~~~~~~vlh~~~d~~~--~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~A 324 (353)
T 4a6d_A 247 LYILARVLHDWADGKC--SHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSA 324 (353)
T ss_dssp EEEEESSGGGSCHHHH--HHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHH
T ss_pred EEEeeeecccCCHHHH--HHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHC
Confidence 9999999999875 34 68999999999999999987431 0 023566777777
Q ss_pred CCeeE-EeecCCCeeEEEEEecc
Q 027471 188 HWDVR-MIYTNDNQGMLCVHKTY 209 (223)
Q Consensus 188 ~W~~~-~~~~~~~e~~L~~~K~~ 209 (223)
-|+.. +........+++|+|..
T Consensus 325 Gf~~v~v~~~~~~~~~i~ArKgt 347 (353)
T 4a6d_A 325 GFRDFQFKKTGAIYDAILARKGT 347 (353)
T ss_dssp TCEEEEEECCSSSCEEEEEECCC
T ss_pred CCceEEEEEcCCceEEEEEEecC
Confidence 77754 33334456788999964
No 181
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.39 E-value=1.5e-07 Score=80.34 Aligned_cols=106 Identities=16% Similarity=0.145 Sum_probs=68.6
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhh----Cccc----ccccccccCCCCC-cchhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYER----GLFG----LYHDWCESFNTYP-RTYDLL 136 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eR----GLi~----~~~dwce~f~tyP-rtyDll 136 (223)
-.+|||+|||.|.++..|++. .|+.+.+.|. .++.+.++ |+.. ...|.++. ++ .+||+|
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~----~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~D~V 185 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREE----FAKLAESNLTKWGLIERVTIKVRDISEG---FDEKDVDAL 185 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHH----HHHHHHHHHHHTTCGGGEEEECCCGGGC---CSCCSEEEE
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHH----HHHHHHHHHHHcCCCCCEEEEECCHHHc---ccCCccCEE
Confidence 348999999999999988765 3444444332 33333333 5522 22333222 55 789998
Q ss_pred hhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH-HHHHHHHHHHHhCCCee
Q 027471 137 HADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWDV 191 (223)
Q Consensus 137 H~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~-~~~~~i~~i~~~l~W~~ 191 (223)
-++ --....++.++.|+|+|||.+++.+.. +...++.+.++...|..
T Consensus 186 ~~~--------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 186 FLD--------VPDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp EEC--------CSCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred EEC--------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 774 112348899999999999999998763 45566666666666654
No 182
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.38 E-value=6.8e-08 Score=82.39 Aligned_cols=97 Identities=14% Similarity=0.138 Sum_probs=63.2
Q ss_pred CceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc---cc-ccccccCCCC------Ccchh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG---LY-HDWCESFNTY------PRTYD 134 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~---~~-~dwce~f~ty------PrtyD 134 (223)
.-++|||+|||.|.++..|++. .|+.+.+.|.......+.+.+.|+-. ++ .|..+.++.+ +.+||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 3468999999999999888653 46666665543322333444457632 22 2322223333 57899
Q ss_pred hhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 135 LLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 135 llH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
+|.++.. .-....++.++-|+|||||.+++.+
T Consensus 159 ~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSC------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 9887622 1234688999999999999999974
No 183
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.37 E-value=8.9e-08 Score=79.64 Aligned_cols=100 Identities=16% Similarity=0.192 Sum_probs=60.9
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCccccccccccc-CCCCC-c-chhh
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCES-FNTYP-R-TYDL 135 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~-f~tyP-r-tyDl 135 (223)
+.+.+.. -.+|||+|||.|.+++.|.+. .|+.+.+.|.......+...+.|+..+ .--+.. ...++ . .||+
T Consensus 85 ~~l~~~~--~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d~~~~~~~~~~fD~ 161 (235)
T 1jg1_A 85 EIANLKP--GMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILGDGSKGFPPKAPYDV 161 (235)
T ss_dssp HHHTCCT--TCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESCGGGCCGGGCCEEE
T ss_pred HhcCCCC--CCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEECCcccCCCCCCCccE
Confidence 3444433 358999999999999999774 567776654422212222233454331 111122 22344 3 4999
Q ss_pred hhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 136 LHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 136 lH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
|.+...+.+. .-++-|+|||||.+++.-.
T Consensus 162 Ii~~~~~~~~---------~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 162 IIVTAGAPKI---------PEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp EEECSBBSSC---------CHHHHHTEEEEEEEEEEEC
T ss_pred EEECCcHHHH---------HHHHHHhcCCCcEEEEEEe
Confidence 9987555433 3478899999999999754
No 184
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.36 E-value=2.4e-07 Score=76.98 Aligned_cols=128 Identities=9% Similarity=0.132 Sum_probs=70.9
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh-----CcccccccccccC--CCCCcchhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER-----GLFGLYHDWCESF--NTYPRTYDLLHAD 139 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR-----GLi~~~~dwce~f--~tyPrtyDllH~~ 139 (223)
-.+|||+|||.|.++..|++. .|+.+.++|.. ++.+.++ .+.-...|..+.. ..++.+||+|.+.
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~----~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRI----MRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED 150 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHH----HHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHH----HHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe
Confidence 458999999999999988765 36667766532 2221111 1111222221110 1133789997632
Q ss_pred hhhcccccccchhHHHHhhhhcccCCcEEEEe----cc-----HH--HHHHHHHHHHhCCCeeEEe-ec---CCCeeEEE
Q 027471 140 HLFSTIKKRCSLKAVVAEVDRILRPDGNLILR----DD-----AE--TIVEVEDLVKSLHWDVRMI-YT---NDNQGMLC 204 (223)
Q Consensus 140 ~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~----D~-----~~--~~~~i~~i~~~l~W~~~~~-~~---~~~e~~L~ 204 (223)
..+.-....++.++.|+|||||.+++. .. .. ....++ +++...++.... +- +.+.-+++
T Consensus 151 -----~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~ 224 (230)
T 1fbn_A 151 -----VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFV 224 (230)
T ss_dssp -----CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEE
T ss_pred -----cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEE
Confidence 111111357799999999999999994 11 01 124555 555555554322 11 23456778
Q ss_pred EEec
Q 027471 205 VHKT 208 (223)
Q Consensus 205 ~~K~ 208 (223)
++|+
T Consensus 225 ~~k~ 228 (230)
T 1fbn_A 225 GIWE 228 (230)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8773
No 185
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.36 E-value=5.3e-08 Score=79.93 Aligned_cols=128 Identities=8% Similarity=0.056 Sum_probs=71.2
Q ss_pred eEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCc--cccc-ccccccCCCCCcchhhhhhhhhhccc
Q 027471 72 RNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGL--FGLY-HDWCESFNTYPRTYDLLHADHLFSTI 145 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGL--i~~~-~dwce~f~tyPrtyDllH~~~lfs~~ 145 (223)
.+|||+|||+|.++..++.++ |+.+.++|.......+.+.+.|+ +-++ .|..+.++..+.+||+|-++..|..
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~~- 134 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRR- 134 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSST-
T ss_pred CeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCCC-
Confidence 579999999999999766553 45555544322212222333454 2222 2322223333478999988755541
Q ss_pred ccccchhHHHHhhh--hcccCCcEEEEeccHHHHHHHHHHHHhCCCeeEEeecCCCeeEEEEEe
Q 027471 146 KKRCSLKAVVAEVD--RILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 207 (223)
Q Consensus 146 ~~rC~i~~vl~E~D--RILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K 207 (223)
-..+.++.++. |+|+|||.+++....... +.. ..-.|.......-+...+.+.+|
T Consensus 135 ---~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~--~~~--~~~~~~~~~~~~~g~~~~~~~~~ 191 (202)
T 2fpo_A 135 ---GLLEETINLLEDNGWLADEALIYVESEVENG--LPT--VPANWSLHREKVAGQVAYRLYQR 191 (202)
T ss_dssp ---TTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC--SCC--CCTTEEEEEEEEETTEEEEEEEE
T ss_pred ---CcHHHHHHHHHhcCccCCCcEEEEEECCCcc--ccc--cCCcceEEeeeccCCEEEEEEEE
Confidence 12346677774 579999999998554321 000 01246544332334556666554
No 186
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.35 E-value=4.7e-07 Score=79.67 Aligned_cols=134 Identities=16% Similarity=0.133 Sum_probs=77.0
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh------Cc----cccc-ccccccCCC-CCcchh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER------GL----FGLY-HDWCESFNT-YPRTYD 134 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR------GL----i~~~-~dwce~f~t-yPrtyD 134 (223)
-.+|||+|||.|+++..|++. .|+++.+.|. .++.+.++ ++ +-++ .|..+-... -+++||
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~----~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGE----VMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHH----HHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHH----HHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCcee
Confidence 478999999999999999876 3555555443 22322221 11 1222 222211111 248899
Q ss_pred hhhhhhhhcccccccc-hhHHHHhhhhcccCCcEEEEeccH-----HHHHHHHHHHHhCCCeeE-Eee------cCCCee
Q 027471 135 LLHADHLFSTIKKRCS-LKAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVR-MIY------TNDNQG 201 (223)
Q Consensus 135 llH~~~lfs~~~~rC~-i~~vl~E~DRILRPgG~~ii~D~~-----~~~~~i~~i~~~l~W~~~-~~~------~~~~e~ 201 (223)
+|-++.........-. -..++.++.|+|||||.+++.... .....+.+.++...+... ... ..+.-.
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~ 251 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIG 251 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceE
Confidence 9988643322211111 147899999999999999996332 344556666666555432 221 124557
Q ss_pred EEEEEec
Q 027471 202 MLCVHKT 208 (223)
Q Consensus 202 ~L~~~K~ 208 (223)
+++|.|.
T Consensus 252 f~~as~~ 258 (304)
T 3bwc_A 252 TLVCSKK 258 (304)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 8889986
No 187
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.35 E-value=1.8e-07 Score=82.76 Aligned_cols=120 Identities=17% Similarity=0.191 Sum_probs=69.6
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc--ccccccccCCCCCcchhhhhhhhhhc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
-.+|||+|||.|+++.+|++. .|+.+.+.+.......+.+...|+.. +++.-...++.++.+||+|-++--.|
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCC
Confidence 357999999999999988753 36666554432221122222236632 33322223333457899988743222
Q ss_pred cc------cc------cc-------chhHHHHhhhhcccCCcEEEEec----cHHHHHHHHHHHHhCCCe
Q 027471 144 TI------KK------RC-------SLKAVVAEVDRILRPDGNLILRD----DAETIVEVEDLVKSLHWD 190 (223)
Q Consensus 144 ~~------~~------rC-------~i~~vl~E~DRILRPgG~~ii~D----~~~~~~~i~~i~~~l~W~ 190 (223)
.. .+ .. .-..+|.++-|+|||||.++++. ..+....++.+++...++
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 11 10 00 01388999999999999999962 233345566676665544
No 188
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.34 E-value=3.8e-07 Score=75.16 Aligned_cols=105 Identities=13% Similarity=0.172 Sum_probs=65.1
Q ss_pred ceEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHh----hCcccccccccccCCC-C-C-cchhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYE----RGLFGLYHDWCESFNT-Y-P-RTYDLLHADHL 141 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~e----RGLi~~~~dwce~f~t-y-P-rtyDllH~~~l 141 (223)
-.+|||+|||.|.++..|++. .|+.+.+.|. .++.+.+ .|+..-+...+..+.. . + +.||+|-+.
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~----~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-- 165 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEE----FYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD-- 165 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEEEEECSCHH----HHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC--
T ss_pred CCEEEEeCCCccHHHHHHHHhCCEEEEEecCHH----HHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC--
Confidence 358999999999999998875 3444443332 3443333 3552211111222222 3 4 689998764
Q ss_pred hcccccccchhHHHHhhhhcccCCcEEEEecc-HHHHHHHHHHHHhC
Q 027471 142 FSTIKKRCSLKAVVAEVDRILRPDGNLILRDD-AETIVEVEDLVKSL 187 (223)
Q Consensus 142 fs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~-~~~~~~i~~i~~~l 187 (223)
-.....++.++-|+|||||.+++... .+...++...++..
T Consensus 166 ------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 166 ------VREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp ------SSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred ------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 12335889999999999999999876 44555555555444
No 189
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.34 E-value=3.7e-07 Score=92.70 Aligned_cols=97 Identities=14% Similarity=0.188 Sum_probs=68.1
Q ss_pred ceEEEeeCCchHHHHHHhhCCC-----eEEEEecCCCCCCChhhHHh----------hCcc--cccccccccCCCCCcch
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK-----VWVMNVVPIESPDTLPIIYE----------RGLF--GLYHDWCESFNTYPRTY 133 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~-----V~vmnv~p~~~~~~l~~i~e----------RGLi--~~~~dwce~f~tyPrty 133 (223)
-.+|||+|||.|.++.+|++++ |+.+.+++. .++.+.+ .|+. -+++.-.+.++..+++|
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~e----mLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sF 797 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPK----GLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDV 797 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHH----HHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHH----HHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCe
Confidence 4689999999999999999875 556666554 3444433 2553 23332222334344899
Q ss_pred hhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 134 DLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 134 DllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
|+|.|..+|.+..+. ....++.|+-|+|||| .++++++
T Consensus 798 DlVV~~eVLeHL~dp-~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 798 DIGTCLEVIEHMEED-QACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp CEEEEESCGGGSCHH-HHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred eEEEEeCchhhCChH-HHHHHHHHHHHHcCCC-EEEEEec
Confidence 999999999988762 2346899999999999 8888753
No 190
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.32 E-value=2.7e-08 Score=82.16 Aligned_cols=90 Identities=14% Similarity=0.141 Sum_probs=56.8
Q ss_pred ceEEEeeCCchHHHHHHhhCC----------CeEEEEecCCCCCCChhhHHhhC-----c--cc-ccccccccCCCCC--
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----------KVWVMNVVPIESPDTLPIIYERG-----L--FG-LYHDWCESFNTYP-- 130 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----------~V~vmnv~p~~~~~~l~~i~eRG-----L--i~-~~~dwce~f~tyP-- 130 (223)
-.+|||+|||.|.+++.|.+. .|+.+.+.|.......+.+.+.| . +- ...|..+ .++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~---~~~~~ 161 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK---GYPPN 161 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG---CCGGG
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc---CCCcC
Confidence 348999999999999988763 46666665442221122222223 1 22 2223222 244
Q ss_pred cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 131 RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 131 rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
.+||+|++...+. .++.++-|+|||||.+++.-
T Consensus 162 ~~fD~I~~~~~~~---------~~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 162 APYNAIHVGAAAP---------DTPTELINQLASGGRLIVPV 194 (227)
T ss_dssp CSEEEEEECSCBS---------SCCHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCchH---------HHHHHHHHHhcCCCEEEEEE
Confidence 6899999875443 34578899999999999974
No 191
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.32 E-value=2.2e-08 Score=82.13 Aligned_cols=93 Identities=15% Similarity=0.107 Sum_probs=57.0
Q ss_pred eEEEeeCCchHHHHHHhhCC---------CeEEEEecCCCCCCChhhHHhhCc-------cccc-ccccccCC---CCCc
Q 027471 72 RNVMDMRAVYGGFAAALKDL---------KVWVMNVVPIESPDTLPIIYERGL-------FGLY-HDWCESFN---TYPR 131 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~---------~V~vmnv~p~~~~~~l~~i~eRGL-------i~~~-~dwce~f~---tyPr 131 (223)
.+|||+|||.|.+++.|.+. .|+.+.+.|.......+.+.+.|+ +-++ .|..+.++ .-+.
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 58999999999999988763 456666544322212222333352 2222 22211110 1127
Q ss_pred chhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 132 TYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 132 tyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
.||+|++...+. .++.++-|+|+|||.+++.-.
T Consensus 162 ~fD~I~~~~~~~---------~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 162 LFDAIHVGASAS---------ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp CEEEEEECSBBS---------SCCHHHHHHEEEEEEEEEEEE
T ss_pred CcCEEEECCchH---------HHHHHHHHhcCCCcEEEEEEc
Confidence 899999875443 356788999999999999743
No 192
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.32 E-value=6.6e-07 Score=77.72 Aligned_cols=132 Identities=15% Similarity=0.108 Sum_probs=74.9
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhh-----Cc-----------ccccc-cccccCCCCC
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYER-----GL-----------FGLYH-DWCESFNTYP 130 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eR-----GL-----------i~~~~-dwce~f~tyP 130 (223)
-++|||+|||.|+++..+++++ |+++.+.|. .++.+.++ |+ +-++. |-.+.+.. +
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~----~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~ 150 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDED----VIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N 150 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHH----HHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHH----HHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-c
Confidence 4689999999999999998874 455555433 22222221 32 11222 21111222 6
Q ss_pred cchhhhhhhhhhcccccccc--hhHHHHhhhhcccCCcEEEEec-----cHHHHHHHHHHHHhCCCeeEEee----c-CC
Q 027471 131 RTYDLLHADHLFSTIKKRCS--LKAVVAEVDRILRPDGNLILRD-----DAETIVEVEDLVKSLHWDVRMIY----T-ND 198 (223)
Q Consensus 131 rtyDllH~~~lfs~~~~rC~--i~~vl~E~DRILRPgG~~ii~D-----~~~~~~~i~~i~~~l~W~~~~~~----~-~~ 198 (223)
++||+|-++.. ......-. ...++.++.|+|+|||.+++.. ..+....+.+.++..--.+.... + .+
T Consensus 151 ~~fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g 229 (281)
T 1mjf_A 151 RGFDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYAS 229 (281)
T ss_dssp CCEEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSS
T ss_pred CCeeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCc
Confidence 78999988633 22211111 2578999999999999999962 23334444444443322333221 1 34
Q ss_pred CeeEEEEEec
Q 027471 199 NQGMLCVHKT 208 (223)
Q Consensus 199 ~e~~L~~~K~ 208 (223)
...+++|.|.
T Consensus 230 ~~~~~~as~~ 239 (281)
T 1mjf_A 230 PWAFLVGVKG 239 (281)
T ss_dssp SEEEEEEEES
T ss_pred eEEEEEeeCC
Confidence 5778999987
No 193
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.29 E-value=3.3e-07 Score=77.40 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=64.1
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhh-----C-ccc---c-cccccccCCCC-Ccchh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYER-----G-LFG---L-YHDWCESFNTY-PRTYD 134 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eR-----G-Li~---~-~~dwce~f~ty-PrtyD 134 (223)
-.+|||+|||.|.++.+|++. .|+.+.+.|. .++.+.++ | +.. + ..|.++ ++ + +.+||
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~----~~~~a~~~~~~~~g~~~~~v~~~~~d~~~-~~-~~~~~~D 173 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRAD----HAEHARRNVSGCYGQPPDNWRLVVSDLAD-SE-LPDGSVD 173 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHH----HHHHHHHHHHHHHTSCCTTEEEECSCGGG-CC-CCTTCEE
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHH----HHHHHHHHHHHhcCCCCCcEEEEECchHh-cC-CCCCcee
Confidence 347999999999999998764 3444444332 33333332 4 221 2 223222 11 3 37899
Q ss_pred hhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH-HHHHHHHHHHHh-CCCe
Q 027471 135 LLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKS-LHWD 190 (223)
Q Consensus 135 llH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~-~~~~~i~~i~~~-l~W~ 190 (223)
+|-+. -.....++.++.|+|||||.+++.... +.+.++...++. ..|.
T Consensus 174 ~v~~~--------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 174 RAVLD--------MLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EEEEE--------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred EEEEC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 98773 113348899999999999999997543 344444444333 5554
No 194
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.29 E-value=1.7e-07 Score=83.06 Aligned_cols=94 Identities=15% Similarity=0.235 Sum_probs=63.1
Q ss_pred CceEEEeeCCchHHHHHHhhCC--C--eEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhccc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL--K--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTI 145 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~--~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~~ 145 (223)
...+|||+|||.|.++.+|.++ + ++++.+ |.......+ + .++--+.+|. |..+| .||++.+.++|+++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~-~~v~~~~~d~---~~~~~-~~D~v~~~~vlh~~ 264 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG--N-ENLNFVGGDM---FKSIP-SADAVLLKWVLHDW 264 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC--C-SSEEEEECCT---TTCCC-CCSEEEEESCGGGS
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc--C-CCcEEEeCcc---CCCCC-CceEEEEcccccCC
Confidence 4579999999999999999765 3 455555 311111111 1 1221133332 23355 49999999999988
Q ss_pred ccccchhHHHHhhhhcccC---CcEEEEec
Q 027471 146 KKRCSLKAVVAEVDRILRP---DGNLILRD 172 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRP---gG~~ii~D 172 (223)
.+. ....+|.++-|+||| ||.+++.|
T Consensus 265 ~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 265 NDE-QSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp CHH-HHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred CHH-HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 753 125899999999999 99999864
No 195
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.29 E-value=2.3e-07 Score=80.10 Aligned_cols=113 Identities=12% Similarity=0.049 Sum_probs=70.0
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCccc--ccccccccCCCCCcchhhhhhhhhhcc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESFNTYPRTYDLLHADHLFST 144 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f~tyPrtyDllH~~~lfs~ 144 (223)
-.+|||+|||+|+|+..|+++ .|+.+.++|.......+-+...|+-. ++..-++.+ ..+.+||+|-++...
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~d~p~-- 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIMGYVH-- 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEECCCS--
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEECCcc--
Confidence 358999999999999988765 46777665543222222233345422 222212222 125689998776322
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEeccHH------HH-HHHHHHHHhCCCee
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRDDAE------TI-VEVEDLVKSLHWDV 191 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~------~~-~~i~~i~~~l~W~~ 191 (223)
....++.++-|+|+|||.+++++... .. ..++.+.+.+.+++
T Consensus 197 -----~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (272)
T 3a27_A 197 -----KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKL 245 (272)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEE
T ss_pred -----cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCee
Confidence 45688999999999999999984432 33 33444555555544
No 196
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.28 E-value=3e-06 Score=74.88 Aligned_cols=136 Identities=15% Similarity=0.186 Sum_probs=74.0
Q ss_pred CCceEEEeeCCchHHHHHHhhCC-C---eEEEEecCCCCCCChhhHHhh------C-----cccc-cccccccCCCCCcc
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDL-K---VWVMNVVPIESPDTLPIIYER------G-----LFGL-YHDWCESFNTYPRT 132 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~-~---V~vmnv~p~~~~~~l~~i~eR------G-----Li~~-~~dwce~f~tyPrt 132 (223)
..-++|||+|||.|++++.|.+. + |+++.+.|. .++++.++ | -+-+ ..|..+-+...+++
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~----vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~ 157 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAG----VVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQT 157 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTT----HHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCC
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHH----HHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCC
Confidence 34679999999999999999887 3 444544433 33333221 1 1222 23322222333589
Q ss_pred hhhhhhhhhhccccc--ccchhHHHHhhhhcccCCcEEEEec-----cHHHHHHHHHHHHhCCCeeEEee----c--CCC
Q 027471 133 YDLLHADHLFSTIKK--RCSLKAVVAEVDRILRPDGNLILRD-----DAETIVEVEDLVKSLHWDVRMIY----T--NDN 199 (223)
Q Consensus 133 yDllH~~~lfs~~~~--rC~i~~vl~E~DRILRPgG~~ii~D-----~~~~~~~i~~i~~~l~W~~~~~~----~--~~~ 199 (223)
||+|-++. +..... ......++.++-|+|+|||.+++.. ..+....+.+.++..--.+.... + .+.
T Consensus 158 fDvIi~D~-~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~ 236 (294)
T 3adn_A 158 FDVIISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGI 236 (294)
T ss_dssp EEEEEECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSE
T ss_pred ccEEEECC-CCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCc
Confidence 99998852 222211 1112578999999999999999962 12233333333333222222211 1 234
Q ss_pred eeEEEEEecc
Q 027471 200 QGMLCVHKTY 209 (223)
Q Consensus 200 e~~L~~~K~~ 209 (223)
-.+++|.|..
T Consensus 237 ~~f~~as~~~ 246 (294)
T 3adn_A 237 MTFAWATDND 246 (294)
T ss_dssp EEEEEEESCT
T ss_pred eEEEEEeCCc
Confidence 5788999875
No 197
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.28 E-value=2.8e-07 Score=86.77 Aligned_cols=100 Identities=11% Similarity=0.139 Sum_probs=66.1
Q ss_pred CceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHHhhCcccccccccccCCC--CCcchhhhhhhhhhcc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT--YPRTYDLLHADHLFST 144 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t--yPrtyDllH~~~lfs~ 144 (223)
.-.+|||+|||.|.++..+++. .|+.+.+++ ......+.+.+.|+-.-+.=.+..+.. +|..||+|-|..++.+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~~ 236 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYM 236 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHHH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchHh
Confidence 3468999999999999988876 356666655 322234445556763211111223333 5688999999766655
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEe
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
..+. .+...+.++.|+|+|||.+++.
T Consensus 237 ~~~e-~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 237 LFNE-RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HTCH-HHHHHHHHGGGGEEEEEEEESC
T ss_pred cCcH-HHHHHHHHHHHhcCCCCEEEEE
Confidence 5432 3456777999999999999863
No 198
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.27 E-value=1.3e-07 Score=83.16 Aligned_cols=95 Identities=13% Similarity=0.041 Sum_probs=54.2
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhC----------c---ccc-cccccccCCCCC-
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERG----------L---FGL-YHDWCESFNTYP- 130 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRG----------L---i~~-~~dwce~f~tyP- 130 (223)
-.+|||+|||.|.++.+|++. .|+.+.+.|.......+.+.+.| + +-+ ..|.++....++
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKS 185 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCC
Confidence 458999999999999988764 35666654432111111111111 1 222 233333222344
Q ss_pred cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 131 RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 131 rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
.+||+|.++. ..-..++.++.|+|||||.+++...
T Consensus 186 ~~fD~V~~~~--------~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 186 LTFDAVALDM--------LNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp --EEEEEECS--------SSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred CCeeEEEECC--------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 6899988751 1123578999999999999998654
No 199
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.24 E-value=4e-06 Score=74.64 Aligned_cols=130 Identities=11% Similarity=0.127 Sum_probs=77.1
Q ss_pred cCCCCCCceEEEeeCC------chHH-HHHHhhC--CCeEEEEecCCCCCCChhhHHhhCccc-ccccccccCCCCCcch
Q 027471 64 MGINWSFVRNVMDMRA------VYGG-FAAALKD--LKVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYPRTY 133 (223)
Q Consensus 64 l~i~~~~iRnvLDmga------G~Gg-FAA~L~~--~~V~vmnv~p~~~~~~l~~i~eRGLi~-~~~dwce~f~tyPrty 133 (223)
+.++.+ .+|||+|| |.|+ .+|.+.. -.|+.+.++|. + .++-- +..|+. .++ ++.+|
T Consensus 59 l~l~~g--~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-----v-----~~v~~~i~gD~~-~~~-~~~~f 124 (290)
T 2xyq_A 59 LAVPYN--MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-----V-----SDADSTLIGDCA-TVH-TANKW 124 (290)
T ss_dssp CCCCTT--CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-----B-----CSSSEEEESCGG-GCC-CSSCE
T ss_pred cCCCCC--CEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-----C-----CCCEEEEECccc-cCC-ccCcc
Confidence 344443 57999999 5586 3444443 35778888776 1 12221 233332 222 35889
Q ss_pred hhhhhhhhhcc--------cccccchhHHHHhhhhcccCCcEEEEeccH-HHHHHHHHHHHhCCCe-eEEe--ecCCCee
Q 027471 134 DLLHADHLFST--------IKKRCSLKAVVAEVDRILRPDGNLILRDDA-ETIVEVEDLVKSLHWD-VRMI--YTNDNQG 201 (223)
Q Consensus 134 DllH~~~lfs~--------~~~rC~i~~vl~E~DRILRPgG~~ii~D~~-~~~~~i~~i~~~l~W~-~~~~--~~~~~e~ 201 (223)
|+|.|+...+. ......++.++.|+-|+|||||.|++.... .....+.++++...+. +... ..++.|.
T Consensus 125 D~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~ 204 (290)
T 2xyq_A 125 DLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEA 204 (290)
T ss_dssp EEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCE
T ss_pred cEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchhe
Confidence 99998633221 111122357899999999999999996422 1234666677776443 3333 1245789
Q ss_pred EEEEEe
Q 027471 202 MLCVHK 207 (223)
Q Consensus 202 ~L~~~K 207 (223)
+|+|+.
T Consensus 205 ~lv~~~ 210 (290)
T 2xyq_A 205 FLIGAN 210 (290)
T ss_dssp EEEEEE
T ss_pred EEecCC
Confidence 998886
No 200
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.23 E-value=4.4e-07 Score=85.13 Aligned_cols=106 Identities=11% Similarity=0.015 Sum_probs=65.6
Q ss_pred hhhccCCCCCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCC-------hhhHHhhCcc-c---ccccccc
Q 027471 60 YLNGMGINWSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDT-------LPIIYERGLF-G---LYHDWCE 124 (223)
Q Consensus 60 Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~-------l~~i~eRGLi-~---~~~dwce 124 (223)
.++.+++.. -.+|||+|||+|.+++.|++. .|+.+.+++...... .+.+...|+- + +++ +.
T Consensus 234 ml~~l~l~~--g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~--gD 309 (433)
T 1u2z_A 234 VYQQCQLKK--GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL--KK 309 (433)
T ss_dssp HHHHTTCCT--TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE--SS
T ss_pred HHHhcCCCC--CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE--cC
Confidence 444454443 468999999999999998874 366676655421111 2223344631 2 222 12
Q ss_pred cCCC---C---CcchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 125 SFNT---Y---PRTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 125 ~f~t---y---PrtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
.+.. + +.+||+|-+...+. . -.+..+|.|+-|+|||||.+++.+.
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l~-~---~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFLF-D---EDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTTC-C---HHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred ccccccccccccCCCCEEEEeCccc-c---ccHHHHHHHHHHhCCCCeEEEEeec
Confidence 3321 2 47899998864331 1 1345788999999999999999864
No 201
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.22 E-value=2e-06 Score=75.50 Aligned_cols=134 Identities=10% Similarity=0.061 Sum_probs=74.7
Q ss_pred ceEEEeeCCchHHHHHHhhCC-C---eEEEEecCCCCCCChhhHHh------hCc----cccc-ccccccCCCCCcchhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-K---VWVMNVVPIESPDTLPIIYE------RGL----FGLY-HDWCESFNTYPRTYDL 135 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-~---V~vmnv~p~~~~~~l~~i~e------RGL----i~~~-~dwce~f~tyPrtyDl 135 (223)
-.+|||+|||.|+++..++++ + |+++.+.|. .++.+.+ .|+ +-++ .|..+.++..+++||+
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~----~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 166 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGL----VIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDV 166 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHH----HHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHH----HHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceE
Confidence 378999999999999999887 3 455555443 2222222 122 1222 2222223334588999
Q ss_pred hhhhhhhcc-ccc--ccchhHHHHhhhhcccCCcEEEEecc-----HHHHHHHHHHHHhCCCeeEEee------cCCCee
Q 027471 136 LHADHLFST-IKK--RCSLKAVVAEVDRILRPDGNLILRDD-----AETIVEVEDLVKSLHWDVRMIY------TNDNQG 201 (223)
Q Consensus 136 lH~~~lfs~-~~~--rC~i~~vl~E~DRILRPgG~~ii~D~-----~~~~~~i~~i~~~l~W~~~~~~------~~~~e~ 201 (223)
|-++ ++.. ... .-....++.++.|+|+|||.+++... .+....+.+.+++.--.+.... ..+...
T Consensus 167 Ii~d-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~ 245 (296)
T 1inl_A 167 IIID-STDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWS 245 (296)
T ss_dssp EEEE-C----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEE
T ss_pred EEEc-CCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceE
Confidence 9875 2222 111 00125789999999999999999722 2223333333333322333221 134567
Q ss_pred EEEEEecc
Q 027471 202 MLCVHKTY 209 (223)
Q Consensus 202 ~L~~~K~~ 209 (223)
+++|.|++
T Consensus 246 f~~as~~~ 253 (296)
T 1inl_A 246 YTFASKGI 253 (296)
T ss_dssp EEEEESSC
T ss_pred EEEecCCC
Confidence 89999874
No 202
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.21 E-value=1.4e-06 Score=77.12 Aligned_cols=134 Identities=15% Similarity=0.111 Sum_probs=77.1
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHh------hC-c----cccc-ccccccCCCCCcchh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYE------RG-L----FGLY-HDWCESFNTYPRTYD 134 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~e------RG-L----i~~~-~dwce~f~tyPrtyD 134 (223)
-++|||+|||.|+++..|+++ .|+++.+.|. .++.+.+ +| + +-++ .|-.+.++..+.+||
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~----~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGE----LVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD 153 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHH----HHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHH----HHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCcc
Confidence 478999999999999999887 3555555443 2222221 22 1 1222 221111222358899
Q ss_pred hhhhhhhhccc---cc--ccchhHHHHhhhhcccCCcEEEEecc------HHHHHHHHHHHHhCCCeeEEee----c-CC
Q 027471 135 LLHADHLFSTI---KK--RCSLKAVVAEVDRILRPDGNLILRDD------AETIVEVEDLVKSLHWDVRMIY----T-ND 198 (223)
Q Consensus 135 llH~~~lfs~~---~~--rC~i~~vl~E~DRILRPgG~~ii~D~------~~~~~~i~~i~~~l~W~~~~~~----~-~~ 198 (223)
+|-++.. ... .. .-....++.++.|+|+|||.+++... .+....+.+.++..--.+.... + .+
T Consensus 154 ~Ii~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g 232 (314)
T 1uir_A 154 VVIIDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFL 232 (314)
T ss_dssp EEEEECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTE
T ss_pred EEEECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCC
Confidence 9998633 332 11 11135889999999999999998621 2334445444555433333221 1 23
Q ss_pred CeeEEEEEecc
Q 027471 199 NQGMLCVHKTY 209 (223)
Q Consensus 199 ~e~~L~~~K~~ 209 (223)
.-.+++|.|.+
T Consensus 233 ~~~~~~as~~~ 243 (314)
T 1uir_A 233 NFGFLLASDAF 243 (314)
T ss_dssp EEEEEEEESSS
T ss_pred eEEEEEEECCC
Confidence 45688899873
No 203
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.21 E-value=2.6e-06 Score=73.99 Aligned_cols=135 Identities=16% Similarity=0.155 Sum_probs=78.5
Q ss_pred CceEEEeeCCchHHHHHHhhCC-C---eEEEEecCCCCCCChhhHHhh------Cc----ccccc-cccccCCCCCcchh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL-K---VWVMNVVPIESPDTLPIIYER------GL----FGLYH-DWCESFNTYPRTYD 134 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~-~---V~vmnv~p~~~~~~l~~i~eR------GL----i~~~~-dwce~f~tyPrtyD 134 (223)
.-++|||+|||.|+++.+++++ + |+++.+.|. .++.+.+. ++ +-+++ |-.+-+...+.+||
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~----~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGK----VIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHH----HHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHH----HHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCee
Confidence 4578999999999999999887 4 455555333 22222221 22 22222 21111222358899
Q ss_pred hhhhhhhhccccc--ccchhHHHHhhhhcccCCcEEEEecc-----HHHHHHHHHHHHhCCCeeEEee----c--CCCee
Q 027471 135 LLHADHLFSTIKK--RCSLKAVVAEVDRILRPDGNLILRDD-----AETIVEVEDLVKSLHWDVRMIY----T--NDNQG 201 (223)
Q Consensus 135 llH~~~lfs~~~~--rC~i~~vl~E~DRILRPgG~~ii~D~-----~~~~~~i~~i~~~l~W~~~~~~----~--~~~e~ 201 (223)
+|-++. +..... ......++.++-|+|+|||.+++... .+....+.+.+++.--.+.... + .+.-.
T Consensus 151 ~Ii~d~-~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~ 229 (275)
T 1iy9_A 151 VIMVDS-TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWT 229 (275)
T ss_dssp EEEESC-SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEE
T ss_pred EEEECC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceE
Confidence 998863 332211 11124789999999999999999732 2334444444444423333221 1 34567
Q ss_pred EEEEEecc
Q 027471 202 MLCVHKTY 209 (223)
Q Consensus 202 ~L~~~K~~ 209 (223)
+++|.|++
T Consensus 230 ~~~ask~~ 237 (275)
T 1iy9_A 230 FTIGSKKY 237 (275)
T ss_dssp EEEEESSC
T ss_pred EEEeeCCC
Confidence 88999874
No 204
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.19 E-value=1.5e-07 Score=81.08 Aligned_cols=116 Identities=16% Similarity=0.176 Sum_probs=65.7
Q ss_pred ceEEEeeCCchHHHHHHhhC-----CCeEEEEecCCCCCCChhhHHhhCccc--ccccccccCCCC----Ccchhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKD-----LKVWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESFNTY----PRTYDLLHAD 139 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~-----~~V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f~ty----PrtyDllH~~ 139 (223)
-.+|||+|||.|+++..|++ ..|+.+.+.+.......+.+...|+.. +++.-...+... +..||+|-++
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d 163 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEc
Confidence 35899999999999988875 246667665442221122222236522 222111122221 5689998876
Q ss_pred hhhcccc--------------c-ccchhHHHHhhhhcccCCcEEEEec----cHHHHHHHHHHHHh
Q 027471 140 HLFSTIK--------------K-RCSLKAVVAEVDRILRPDGNLILRD----DAETIVEVEDLVKS 186 (223)
Q Consensus 140 ~lfs~~~--------------~-rC~i~~vl~E~DRILRPgG~~ii~D----~~~~~~~i~~i~~~ 186 (223)
--+|... + .-....+|.++-|+|||||.++++. ..+.-..++.+++.
T Consensus 164 ~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~ 229 (274)
T 3ajd_A 164 APCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQK 229 (274)
T ss_dssp ECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHH
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHh
Confidence 3333211 0 0122478999999999999999962 22334455665543
No 205
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.19 E-value=1.4e-06 Score=70.19 Aligned_cols=116 Identities=15% Similarity=0.080 Sum_probs=74.9
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCc-ccccccccccCCCCCcchhhhhhhhhhcccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGL-FGLYHDWCESFNTYPRTYDLLHADHLFSTIK 146 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGL-i~~~~dwce~f~tyPrtyDllH~~~lfs~~~ 146 (223)
-.+|||+|||.|.++.+|.+.+ |+.+.+.|.......+.+...|+ +-+++ ..+..+|.+||+|-++.-|....
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~---~d~~~~~~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFI---GDVSEFNSRVDIVIMNPPFGSQR 126 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEE---SCGGGCCCCCSEEEECCCCSSSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEE---CchHHcCCCCCEEEEcCCCcccc
Confidence 4689999999999999998763 66666654322211222222343 22222 34444678999999987776554
Q ss_pred cccchhHHHHhhhhcccCCcEEEEe-ccHHHHHHHHHHHHhCCCeeE
Q 027471 147 KRCSLKAVVAEVDRILRPDGNLILR-DDAETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 147 ~rC~i~~vl~E~DRILRPgG~~ii~-D~~~~~~~i~~i~~~l~W~~~ 192 (223)
.. ....++.++-|+| ||.+++. ......+.+.+++....+++.
T Consensus 127 ~~-~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 170 (207)
T 1wy7_A 127 KH-ADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVT 170 (207)
T ss_dssp TT-TTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEE
T ss_pred CC-chHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEE
Confidence 32 2346788889998 6655554 366667778888888777764
No 206
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.19 E-value=4.1e-08 Score=82.20 Aligned_cols=102 Identities=11% Similarity=0.029 Sum_probs=54.1
Q ss_pred CceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcc---ccccccccc--CCCCC----cchhhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLF---GLYHDWCES--FNTYP----RTYDLL 136 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi---~~~~dwce~--f~tyP----rtyDll 136 (223)
.-.+|||+|||+|.++..|+.+ .|+.+.++|.......+.+...|+- -+++.-++. +..++ .+||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 3458999999999998888654 5666776554332222333344653 333321111 22344 589999
Q ss_pred hhhhhhccccc------------ccchhHHHHhhhhcccCCcEEEEe
Q 027471 137 HADHLFSTIKK------------RCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 137 H~~~lfs~~~~------------rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
-|.--|..... ......++.++.|+|||||.+.+.
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 88744432210 011124566777888887766554
No 207
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.17 E-value=2.1e-07 Score=80.45 Aligned_cols=118 Identities=13% Similarity=0.054 Sum_probs=69.2
Q ss_pred ceEEEeeCCchHHHHHHhhCC---CeEEEEe-cCCCCCCChhhHH------hhCc-------cc-ccccccccCCCC---
Q 027471 71 VRNVMDMRAVYGGFAAALKDL---KVWVMNV-VPIESPDTLPIIY------ERGL-------FG-LYHDWCESFNTY--- 129 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~---~V~vmnv-~p~~~~~~l~~i~------eRGL-------i~-~~~dwce~f~ty--- 129 (223)
-.+|||+|||+|.++..|+.. .|+.+.+ .|.... ..+.+. ..|+ +- ...+|++.....
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~-~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILN-SLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHH-HHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHH-HHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 358999999999999888776 3555666 343211 111111 2232 21 235576654432
Q ss_pred --CcchhhhhhhhhhcccccccchhHHHHhhhhccc---C--CcEEEEe-cc-HH----HHHHHHHHHHhCC-CeeE
Q 027471 130 --PRTYDLLHADHLFSTIKKRCSLKAVVAEVDRILR---P--DGNLILR-DD-AE----TIVEVEDLVKSLH-WDVR 192 (223)
Q Consensus 130 --PrtyDllH~~~lfs~~~~rC~i~~vl~E~DRILR---P--gG~~ii~-D~-~~----~~~~i~~i~~~l~-W~~~ 192 (223)
+.+||+|-++.++.+.. ....++.++.|+|+ | ||.+++. .. .. ...++.+.++... +++.
T Consensus 159 ~~~~~fD~Ii~~dvl~~~~---~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~ 232 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFHQ---AHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAE 232 (281)
T ss_dssp HSCSSBSEEEEESCCSCGG---GHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEE
T ss_pred ccCCCCCEEEEeCcccChH---HHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEE
Confidence 47899998876665433 25689999999999 9 9976553 22 11 1234444555555 6554
No 208
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.17 E-value=5.6e-07 Score=82.84 Aligned_cols=122 Identities=16% Similarity=0.090 Sum_probs=69.8
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcccc--cccccccCCCCCcchhhhhhhhh-hccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFGL--YHDWCESFNTYPRTYDLLHADHL-FSTI 145 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~~--~~dwce~f~tyPrtyDllH~~~l-fs~~ 145 (223)
-.+|||+|||+|+|+.+++..+ |+.+.++|..-....+-+...|+-.. ..|..+.++.++..||+|.++-- |+..
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~ 294 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVKR 294 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCSS
T ss_pred CCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCCC
Confidence 3589999999999999998765 45555544422212222333455421 22222222334545999987522 2211
Q ss_pred cc-----ccchhHHHHhhhhcccCCcEEEEecc------HHHHHHHHHHHHhCCCeeE
Q 027471 146 KK-----RCSLKAVVAEVDRILRPDGNLILRDD------AETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 146 ~~-----rC~i~~vl~E~DRILRPgG~~ii~D~------~~~~~~i~~i~~~l~W~~~ 192 (223)
.. ......++.++-|+|+|||.+++... ......+++.+....-+..
T Consensus 295 ~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~ 352 (393)
T 4dmg_A 295 PEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLR 352 (393)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEE
Confidence 10 11234788999999999999996522 2234556565555544443
No 209
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.16 E-value=1.3e-06 Score=77.56 Aligned_cols=122 Identities=11% Similarity=0.014 Sum_probs=73.6
Q ss_pred CCCceEEEeeCCchHHHHHHhhC-----CCeEEEEecCCCCCCChhhHHhhCc--ccccccccccCCCCCcchhhhhhhh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKD-----LKVWVMNVVPIESPDTLPIIYERGL--FGLYHDWCESFNTYPRTYDLLHADH 140 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~-----~~V~vmnv~p~~~~~~l~~i~eRGL--i~~~~dwce~f~tyPrtyDllH~~~ 140 (223)
+..-..|||+|||.|+++..++. ..|+.+.+.|.......+-+...|+ +-+.+.-...++.....||+|-|+-
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECC
Confidence 33456899999999999776655 4577777765543323333444565 3333321222333336789999864
Q ss_pred hhcccc-c----ccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeE
Q 027471 141 LFSTIK-K----RCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 141 lfs~~~-~----rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~ 192 (223)
-|..-. + ......++.++.|+|||||.+++...... .++.+.+ ..|+..
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~--~~~~~~~-~g~~~~ 334 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA--LLKRALP-PGFALR 334 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH--HHHHHCC-TTEEEE
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHHHhh-cCcEEE
Confidence 443211 1 11125789999999999999988755442 2445555 667654
No 210
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.16 E-value=9.5e-07 Score=81.36 Aligned_cols=100 Identities=16% Similarity=0.170 Sum_probs=65.8
Q ss_pred ceEEEeeCCchHHHHHHhhC---CCeEEEEecCCCCCCChhhHHhhCcccccccccccCCC--CCcchhhhhhhhhhccc
Q 027471 71 VRNVMDMRAVYGGFAAALKD---LKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNT--YPRTYDLLHADHLFSTI 145 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~---~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~t--yPrtyDllH~~~lfs~~ 145 (223)
-..|||+|||+|-++-..++ +.|+.+..+| ......+.+.+.|+-..+.-.+..... .|.-||+|=|.-+-+..
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~l 162 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGL 162 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTTB
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccccc
Confidence 34799999999986544443 4688877654 233366677778884432222234333 56889998774332333
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEe
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
..-..++.++...||.|+|||.+|-+
T Consensus 163 ~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 163 LHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cccchhhhHHHHHHhhCCCCceECCc
Confidence 33334678999999999999998865
No 211
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.14 E-value=3.1e-06 Score=75.43 Aligned_cols=134 Identities=19% Similarity=0.242 Sum_probs=76.5
Q ss_pred ceEEEeeCCchHHHHHHhhCC-C---eEEEEecCCCCCCChhhHHhh------Cc----cc-ccccccccCCCCCcchhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-K---VWVMNVVPIESPDTLPIIYER------GL----FG-LYHDWCESFNTYPRTYDL 135 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-~---V~vmnv~p~~~~~~l~~i~eR------GL----i~-~~~dwce~f~tyPrtyDl 135 (223)
-.+|||+|||.|+++..+.+. + |+++.+.|. .++.+.++ |+ +- ...|..+.++..+.+||+
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~----~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDv 192 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDET----VIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 192 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHH----HHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHH----HHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceE
Confidence 378999999999999999877 2 455555433 33332221 22 11 222322222223588999
Q ss_pred hhhhhhhccccc--ccchhHHHHhhhhcccCCcEEEEecc-----HHHHHHHHHHHHhCCCeeEEee------cCCCeeE
Q 027471 136 LHADHLFSTIKK--RCSLKAVVAEVDRILRPDGNLILRDD-----AETIVEVEDLVKSLHWDVRMIY------TNDNQGM 202 (223)
Q Consensus 136 lH~~~lfs~~~~--rC~i~~vl~E~DRILRPgG~~ii~D~-----~~~~~~i~~i~~~l~W~~~~~~------~~~~e~~ 202 (223)
|-++. +..+.. ...-..++.++.|+|+|||.+++... .+....+.+.++..--.+.... ..+.-.+
T Consensus 193 Ii~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f 271 (321)
T 2pt6_A 193 IIVDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGI 271 (321)
T ss_dssp EEEEC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEE
T ss_pred EEECC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEE
Confidence 98753 222211 11115889999999999999999632 2333444444444433443221 1223458
Q ss_pred EEEEecc
Q 027471 203 LCVHKTY 209 (223)
Q Consensus 203 L~~~K~~ 209 (223)
++|.|++
T Consensus 272 ~~as~~~ 278 (321)
T 2pt6_A 272 LCCSKTD 278 (321)
T ss_dssp EEEESST
T ss_pred EEeeCCC
Confidence 8898874
No 212
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.14 E-value=6.5e-07 Score=80.26 Aligned_cols=122 Identities=12% Similarity=-0.012 Sum_probs=66.0
Q ss_pred ceEEEeeCCchHHHHHHhhCCCe--EEEEecCCCCCCChhhHHhhCcc----cccccccccCCC-C---Ccchhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLKV--WVMNVVPIESPDTLPIIYERGLF----GLYHDWCESFNT-Y---PRTYDLLHADH 140 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~V--~vmnv~p~~~~~~l~~i~eRGLi----~~~~dwce~f~t-y---PrtyDllH~~~ 140 (223)
-.+|||+|||+|+|+.+++..+. +.+.+++..-....+-+...|+- -+++.-+..+.. . ..+||+|-++-
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dP 233 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDP 233 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECC
T ss_pred CCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECC
Confidence 35799999999999999988764 33333332111111122223542 223221111111 1 35899987742
Q ss_pred h-hccc------ccccchhHHHHhhhhcccCCcEEEEecc-------HHHHHHHHHHHHhCCCeeE
Q 027471 141 L-FSTI------KKRCSLKAVVAEVDRILRPDGNLILRDD-------AETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 141 l-fs~~------~~rC~i~~vl~E~DRILRPgG~~ii~D~-------~~~~~~i~~i~~~l~W~~~ 192 (223)
- |... ...-....++.++-|+|+|||.+++... ......+++.++....++.
T Consensus 234 P~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 234 PKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 2 1111 0011245889999999999999887622 1123344444556655553
No 213
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.12 E-value=2.4e-06 Score=76.18 Aligned_cols=133 Identities=16% Similarity=0.206 Sum_probs=71.1
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh------Cc----ccc-cccccccCCCCCcchhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER------GL----FGL-YHDWCESFNTYPRTYDL 135 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR------GL----i~~-~~dwce~f~tyPrtyDl 135 (223)
-++|||+|||.|+++..|++. .|+++.+.|. .++.+.++ |+ +-+ ..|..+.+..-+++||+
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~----~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 184 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEM----VIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDV 184 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHH----HHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHH----HHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceE
Confidence 478999999999999999877 2444444332 33333222 32 112 22221112223578999
Q ss_pred hhhhhhhccccc-ccch-hHHHHhhhhcccCCcEEEEecc-----HHHHHHHHHHHHhCCCeeEEee----cC-CCe-eE
Q 027471 136 LHADHLFSTIKK-RCSL-KAVVAEVDRILRPDGNLILRDD-----AETIVEVEDLVKSLHWDVRMIY----TN-DNQ-GM 202 (223)
Q Consensus 136 lH~~~lfs~~~~-rC~i-~~vl~E~DRILRPgG~~ii~D~-----~~~~~~i~~i~~~l~W~~~~~~----~~-~~e-~~ 202 (223)
|-++. +..... .-.. ..++.++.|+|||||.+++... .+....+.+.++.+-=.+.... +- ... .+
T Consensus 185 Ii~d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~ 263 (314)
T 2b2c_A 185 IITDS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGY 263 (314)
T ss_dssp EEECC-C-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEE
T ss_pred EEEcC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEE
Confidence 98753 332221 1111 5889999999999999999732 2233344444444332333221 11 123 68
Q ss_pred EEEEec
Q 027471 203 LCVHKT 208 (223)
Q Consensus 203 L~~~K~ 208 (223)
++|.|.
T Consensus 264 ~~ask~ 269 (314)
T 2b2c_A 264 LICAKN 269 (314)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 888886
No 214
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.10 E-value=4.6e-07 Score=77.84 Aligned_cols=131 Identities=11% Similarity=0.037 Sum_probs=84.2
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCccc-ccccccccCCC-CCcchhhhhhhhhhcc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNT-YPRTYDLLHADHLFST 144 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi~-~~~dwce~f~t-yPrtyDllH~~~lfs~ 144 (223)
-.+|||+|||+|.+|..+... .||...+.+..-.-..+.+..-|+-. +-+ |+.... .|.+||++=+..++++
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~LHl 127 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKMLPV 127 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETCHHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhHHHh
Confidence 568999999999999999665 45666664442221222222335542 222 222222 5588999888777777
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEeccHH-----------HHHHHHHHHHhCCCeeEEeecCCCeeEEEEEe
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRDDAE-----------TIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 207 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~-----------~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K 207 (223)
..++ +..+..+-+.|||||.||--++.+ .....+..+..=-|.+.... -+.|-+.+.+|
T Consensus 128 L~~~---~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~-~~nEl~y~~~~ 197 (200)
T 3fzg_A 128 LKQQ---DVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKV-IGNELVYITSG 197 (200)
T ss_dssp HHHT---TCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEE-ETTEEEEEECC
T ss_pred hhhh---HHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeee-eCceEEEEEec
Confidence 7443 467779999999999999887322 34567777777777765432 24566666655
No 215
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.06 E-value=1.9e-06 Score=77.16 Aligned_cols=132 Identities=13% Similarity=0.069 Sum_probs=74.6
Q ss_pred eEEEeeCCchHHHHHHhhCC-CeE---EEEecCCCCCC-ChhhHHhhCccc-ccccccccCCCCC-cchhhhhhhhhhcc
Q 027471 72 RNVMDMRAVYGGFAAALKDL-KVW---VMNVVPIESPD-TLPIIYERGLFG-LYHDWCESFNTYP-RTYDLLHADHLFST 144 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~-~V~---vmnv~p~~~~~-~l~~i~eRGLi~-~~~dwce~f~tyP-rtyDllH~~~lfs~ 144 (223)
.+|||+|||.|||.-..+++ ++- ..-|. .+.+. .+.. ...|..- ...+=++.+. ++ ..||+|=|+...+
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVG-vDl~~~pi~~-~~~g~~ii~~~~~~dv~~-l~~~~~DlVlsD~apn- 151 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLG-RDGHEKPMNV-QSLGWNIITFKDKTDIHR-LEPVKCDTLLCDIGES- 151 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCC-CTTCCCCCCC-CBTTGGGEEEECSCCTTT-SCCCCCSEEEECCCCC-
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCcceeEEEe-ccCccccccc-CcCCCCeEEEeccceehh-cCCCCccEEEecCccC-
Confidence 46999999999999977655 442 22222 12110 0000 0012100 1111111222 33 7899999987666
Q ss_pred ccc----ccchhHHHHhhhhcccCC-cEEEEe-------ccHHHHHHHHHHHHhCCCeeEEeecCCCeeEEEEEe
Q 027471 145 IKK----RCSLKAVVAEVDRILRPD-GNLILR-------DDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 207 (223)
Q Consensus 145 ~~~----rC~i~~vl~E~DRILRPg-G~~ii~-------D~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K 207 (223)
... .-....+|..+.++|+|| |.|++. +..+.+..++..+++.+...-..-.++.|.+++|..
T Consensus 152 sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~KPaSR~~S~E~Y~V~~~ 226 (277)
T 3evf_A 152 SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNPLSRNSTHEMYYVSGA 226 (277)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCTTSCTTCCCEEEESSC
T ss_pred cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEeCCCCCCCCceEEEEec
Confidence 221 111124578889999999 999996 223345666766666665543112356899999976
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.05 E-value=1.4e-06 Score=78.45 Aligned_cols=97 Identities=18% Similarity=0.215 Sum_probs=61.2
Q ss_pred CceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh------Cc----cc-ccccccccCCCCC-cch
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER------GL----FG-LYHDWCESFNTYP-RTY 133 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR------GL----i~-~~~dwce~f~tyP-rty 133 (223)
.-++|||+|||.|+++..|+++ .|+++.+.|. .++++.++ |+ +- ...|..+.++.++ .+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~----~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~f 195 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKM----VVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSY 195 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHH----HHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHH----HHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCc
Confidence 3479999999999999999887 3555555443 23322221 33 22 2333333333444 789
Q ss_pred hhhhhhhhhcccc--cccchhHHHHhhhhcccCCcEEEEe
Q 027471 134 DLLHADHLFSTIK--KRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 134 DllH~~~lfs~~~--~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
|+|-++. +.... ..-....++.++.|+|+|||.+++.
T Consensus 196 DlIi~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 196 DAVIVDS-SDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEEECC-CCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEECC-CCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9998853 21111 1111358899999999999999996
No 217
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.05 E-value=2.8e-06 Score=80.32 Aligned_cols=141 Identities=10% Similarity=0.098 Sum_probs=78.6
Q ss_pred cCCCCccchhHhhhhHHHHHhhhhhhccCCCCCCceEEEeeCCchHHHHHHhhCC---C-eEEEEecCCCCC---CCh--
Q 027471 37 YGKAAPEDFTADYQHWKNVVSKSYLNGMGINWSFVRNVMDMRAVYGGFAAALKDL---K-VWVMNVVPIESP---DTL-- 107 (223)
Q Consensus 37 ~~~~~~~~f~~D~~~W~~~v~~~Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~---~-V~vmnv~p~~~~---~~l-- 107 (223)
|...+.+.|.+-... .+.+ -++.+++..+ .+|||+|||+|.++..++.. . |+.+.++|.... ...
T Consensus 146 Ye~Fs~~vYGEt~~~---~i~~-il~~l~l~~g--d~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~ 219 (438)
T 3uwp_A 146 YEPFSPEVYGETSFD---LVAQ-MIDEIKMTDD--DLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDRE 219 (438)
T ss_dssp CSSSCGGGGGGTHHH---HHHH-HHHHHCCCTT--CEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHH
T ss_pred cccCCCcccCCCCHH---HHHH-HHHhcCCCCC--CEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 444455555544422 2322 3344555444 46999999999988777532 2 777777553211 011
Q ss_pred --hhHHhhCc----ccccccccccCCCCC-----cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccHHH
Q 027471 108 --PIIYERGL----FGLYHDWCESFNTYP-----RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAET 176 (223)
Q Consensus 108 --~~i~eRGL----i~~~~dwce~f~tyP-----rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~ 176 (223)
+.+...|+ +-+++ +.|-..| ..||+|-+...+- . -.+...|.|+-|+|||||.||+.+...-
T Consensus 220 frkr~~~~Gl~~~rVefi~---GD~~~lp~~d~~~~aDVVf~Nn~~F-~---pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 220 FRKWMKWYGKKHAEYTLER---GDFLSEEWRERIANTSVIFVNNFAF-G---PEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHHHHHHTBCCCEEEEEE---CCTTSHHHHHHHHTCSEEEECCTTC-C---HHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred HHHHHHHhCCCCCCeEEEE---CcccCCccccccCCccEEEEccccc-C---chHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 11223355 22333 4444433 3678877654321 1 1345788999999999999999855332
Q ss_pred ------HHHHHHHHHhCCCe
Q 027471 177 ------IVEVEDLVKSLHWD 190 (223)
Q Consensus 177 ------~~~i~~i~~~l~W~ 190 (223)
...++.+...+++.
T Consensus 293 ~d~~i~~rnl~di~~il~v~ 312 (438)
T 3uwp_A 293 LNFRINSRNLSDIGTIMRVV 312 (438)
T ss_dssp TTCCCCSSSTTSGGGSEEEE
T ss_pred CCCCCCcccccChhhhheee
Confidence 12344455555554
No 218
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.04 E-value=5.4e-06 Score=74.95 Aligned_cols=134 Identities=12% Similarity=0.104 Sum_probs=75.2
Q ss_pred ceEEEeeCCchHHHHHHhhC-C-C--eEEEEecCCCCCCChhhHHhh-Cc-----cccc-ccccccCCCCC-cchhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKD-L-K--VWVMNVVPIESPDTLPIIYER-GL-----FGLY-HDWCESFNTYP-RTYDLLHA 138 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~-~-~--V~vmnv~p~~~~~~l~~i~eR-GL-----i~~~-~dwce~f~tyP-rtyDllH~ 138 (223)
-.+|||+|||.|+++++|.+ . + |+++-+.|. .++.+.++ ++ +-++ .|-.+-+..++ ++||+|-+
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~----vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAE----LARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHH----HHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHH----HHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 34899999999999999987 3 3 444444332 33333222 11 1122 22222223354 89999988
Q ss_pred hhhhcccc--cccchhHHHHhhhhcccCCcEEEEecc--H--HHHHHH-HHHHHhCCCeeEEe-e------cCCCeeEEE
Q 027471 139 DHLFSTIK--KRCSLKAVVAEVDRILRPDGNLILRDD--A--ETIVEV-EDLVKSLHWDVRMI-Y------TNDNQGMLC 204 (223)
Q Consensus 139 ~~lfs~~~--~rC~i~~vl~E~DRILRPgG~~ii~D~--~--~~~~~i-~~i~~~l~W~~~~~-~------~~~~e~~L~ 204 (223)
+ +|.... ....-..++.++.|+|||||.+++.-. . +....+ +.+.+.+. .+... + ......|++
T Consensus 166 D-~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~Vl~ 243 (317)
T 3gjy_A 166 D-VFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNIILM 243 (317)
T ss_dssp C-CSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEEEE
T ss_pred C-CCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEEEE
Confidence 5 344322 111125789999999999999998622 1 222222 23333332 33322 1 123578899
Q ss_pred EEeccc
Q 027471 205 VHKTYW 210 (223)
Q Consensus 205 ~~K~~w 210 (223)
|.|.-.
T Consensus 244 As~~pl 249 (317)
T 3gjy_A 244 GSDTEF 249 (317)
T ss_dssp EESSCC
T ss_pred EECCCC
Confidence 998755
No 219
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.04 E-value=2.2e-06 Score=75.78 Aligned_cols=134 Identities=17% Similarity=0.169 Sum_probs=74.2
Q ss_pred CceEEEeeCCchHHHHHHhhCCC----eEEEEecCCCCCCChhhHHh------hCc----ccccc-cccccCCCCCcchh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLK----VWVMNVVPIESPDTLPIIYE------RGL----FGLYH-DWCESFNTYPRTYD 134 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~----V~vmnv~p~~~~~~l~~i~e------RGL----i~~~~-dwce~f~tyPrtyD 134 (223)
.-++|||+|||.|+++..|+++. |+++.+.|. .++.+.+ .|+ +-++. |-.+.++..+.+||
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~----~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD 170 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDED----VIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFD 170 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHH----HHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHH----HHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCce
Confidence 34789999999999999998872 455555433 2222222 233 22222 21111233458899
Q ss_pred hhhhhhhhccccc--ccchhHHHHhhhhcccCCcEEEEecc-----HHHHHHHHHHHHhCCCeeEEe----ec--CCCee
Q 027471 135 LLHADHLFSTIKK--RCSLKAVVAEVDRILRPDGNLILRDD-----AETIVEVEDLVKSLHWDVRMI----YT--NDNQG 201 (223)
Q Consensus 135 llH~~~lfs~~~~--rC~i~~vl~E~DRILRPgG~~ii~D~-----~~~~~~i~~i~~~l~W~~~~~----~~--~~~e~ 201 (223)
+|-++.. ..... .-....++.++-|+|||||.+++... .+....+.+.++.+-=.+... .+ .+.-.
T Consensus 171 ~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g 249 (304)
T 2o07_A 171 VIITDSS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIG 249 (304)
T ss_dssp EEEEECC------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEE
T ss_pred EEEECCC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceE
Confidence 9988532 22111 00123789999999999999999741 223344444444332233221 11 13356
Q ss_pred EEEEEec
Q 027471 202 MLCVHKT 208 (223)
Q Consensus 202 ~L~~~K~ 208 (223)
+++|.|.
T Consensus 250 ~~~as~~ 256 (304)
T 2o07_A 250 FMLCSKN 256 (304)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 8889886
No 220
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.03 E-value=1.9e-06 Score=75.75 Aligned_cols=41 Identities=17% Similarity=0.376 Sum_probs=34.3
Q ss_pred cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEec
Q 027471 131 RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 131 rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D 172 (223)
..||+|-|.+++.+..+ -....++.++.|.|+|||++++..
T Consensus 212 ~~fDlI~crnvliyf~~-~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 212 GPFDAIFCRNVMIYFDK-TTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp CCEEEEEECSSGGGSCH-HHHHHHHHHHGGGEEEEEEEEECT
T ss_pred CCeeEEEECCchHhCCH-HHHHHHHHHHHHHhCCCcEEEEEe
Confidence 78999999988876643 234699999999999999999953
No 221
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.02 E-value=5.6e-06 Score=66.61 Aligned_cols=107 Identities=13% Similarity=0.048 Sum_probs=64.6
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhC-cccccccccccCCCCCcchhhhhhhhhhcccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERG-LFGLYHDWCESFNTYPRTYDLLHADHLFSTIK 146 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRG-Li~~~~dwce~f~tyPrtyDllH~~~lfs~~~ 146 (223)
-.+|||+|||.|.++.+|.+.+ |+.+.+.|. .++.+.++- -+-+++ ..+..+|.+||+|-++..|.+..
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~----~~~~a~~~~~~~~~~~---~d~~~~~~~~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGAESVTAFDIDPD----AIETAKRNCGGVNFMV---ADVSEISGKYDTWIMNPPFGSVV 124 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHH----HHHHHHHHCTTSEEEE---CCGGGCCCCEEEEEECCCC----
T ss_pred CCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHH----HHHHHHHhcCCCEEEE---CcHHHCCCCeeEEEECCCchhcc
Confidence 4589999999999999998773 555555433 344444331 122222 23334678999999988887765
Q ss_pred cccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCC
Q 027471 147 KRCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLH 188 (223)
Q Consensus 147 ~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~ 188 (223)
+.. ...++.++-|+| |+.+++. +......+.+++....
T Consensus 125 ~~~-~~~~l~~~~~~~--g~~~~~~-~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 125 KHS-DRAFIDKAFETS--MWIYSIG-NAKARDFLRREFSARG 162 (200)
T ss_dssp ----CHHHHHHHHHHE--EEEEEEE-EGGGHHHHHHHHHHHE
T ss_pred Cch-hHHHHHHHHHhc--CcEEEEE-cCchHHHHHHHHHHCC
Confidence 422 236788888888 5544444 4455566777666554
No 222
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.02 E-value=1.7e-05 Score=68.75 Aligned_cols=128 Identities=12% Similarity=0.085 Sum_probs=69.1
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCC---CCChhh---HHhhCcccccccccccCCCCCcchhhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIES---PDTLPI---IYERGLFGLYHDWCESFNTYPRTYDLLHADHLF 142 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~---~~~l~~---i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lf 142 (223)
-++|||+|||.|++++.+.+.+ |+++.+.|... ...++. .++..-+.++.. ....|..+||+|-++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~---D~~~~~~~fD~Ii~d~-- 147 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQ---LLDLDIKKYDLIFCLQ-- 147 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESS---GGGSCCCCEEEEEESS--
T ss_pred CCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEec---hHHHHHhhCCEEEECC--
Confidence 4789999999999999998764 44443332211 111111 111111222221 1112337899988761
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEeccH-----HHHHHHHHHHHhCCCeeEEeec----CCCeeEEEEEecc
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMIYT----NDNQGMLCVHKTY 209 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~-----~~~~~i~~i~~~l~W~~~~~~~----~~~e~~L~~~K~~ 209 (223)
.+ -..++.++-|+|||||.+++.... +....+.+.++..--.+..... .+.-.+++|.|.+
T Consensus 148 ---~d---p~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~vP~~g~~~~~~as~~~ 217 (262)
T 2cmg_A 148 ---EP---DIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAPLRILSNKGYIYASFKT 217 (262)
T ss_dssp ---CC---CHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEECCTTCTTCCEEEEEEESSC
T ss_pred ---CC---hHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEEEccCCCcccEEEEeeCCC
Confidence 11 124788999999999999996221 2233333333333222222211 2345678898863
No 223
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.00 E-value=3.4e-06 Score=73.41 Aligned_cols=133 Identities=20% Similarity=0.296 Sum_probs=73.6
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh------Cc----cccc-ccccccCCCCCcchhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER------GL----FGLY-HDWCESFNTYPRTYDL 135 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR------GL----i~~~-~dwce~f~tyPrtyDl 135 (223)
-++|||+|||.|+++..+.+. .|+++.+.|. .++.+.++ |+ +-++ .|..+.++..+++||+
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~----~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDET----VIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHH----HHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHH----HHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 479999999999999999876 3455555432 22222221 11 1122 2211112223688999
Q ss_pred hhhhhhhcccccccch--hHHHHhhhhcccCCcEEEEecc-----HHHHHHHHHHHHhCCCeeEEee----c--CCCeeE
Q 027471 136 LHADHLFSTIKKRCSL--KAVVAEVDRILRPDGNLILRDD-----AETIVEVEDLVKSLHWDVRMIY----T--NDNQGM 202 (223)
Q Consensus 136 lH~~~lfs~~~~rC~i--~~vl~E~DRILRPgG~~ii~D~-----~~~~~~i~~i~~~l~W~~~~~~----~--~~~e~~ 202 (223)
|-++. +......-.+ ..++.++.|+|||||.+++... .+....+.+.+++.--.+.... + .+.-.+
T Consensus 155 Ii~d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~ 233 (283)
T 2i7c_A 155 IIVDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGI 233 (283)
T ss_dssp EEEEC-CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEE
T ss_pred EEEcC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEE
Confidence 98853 2222211111 5889999999999999999732 2233333333443322332211 1 122368
Q ss_pred EEEEec
Q 027471 203 LCVHKT 208 (223)
Q Consensus 203 L~~~K~ 208 (223)
.+|.|.
T Consensus 234 ~~~s~~ 239 (283)
T 2i7c_A 234 LCCSKT 239 (283)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 888876
No 224
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.99 E-value=3.9e-06 Score=72.39 Aligned_cols=128 Identities=10% Similarity=0.053 Sum_probs=85.5
Q ss_pred eEEEeeCCchHHHHHHhhCCC----eEEEEecCCCCCCChhhHHhhCccc---ccccccccCCCCC-c-chhhhhhhhhh
Q 027471 72 RNVMDMRAVYGGFAAALKDLK----VWVMNVVPIESPDTLPIIYERGLFG---LYHDWCESFNTYP-R-TYDLLHADHLF 142 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~----V~vmnv~p~~~~~~l~~i~eRGLi~---~~~dwce~f~tyP-r-tyDllH~~~lf 142 (223)
.+|+|+|||+|.++.+|++.+ |+.+.+.|..-....+-+...|+-. +.+ +..|...| . .||+|-.++
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~--~d~l~~l~~~~~~D~IviaG-- 92 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRL--ANGLAAFEETDQVSVITIAG-- 92 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEE--CSGGGGCCGGGCCCEEEEEE--
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEE--CchhhhcccCcCCCEEEEcC--
Confidence 579999999999999998863 6667775543333444445567643 222 22344455 3 699765431
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeEEee--cCC--CeeEEEEEe
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIY--TND--NQGMLCVHK 207 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~~~~--~~~--~e~~L~~~K 207 (223)
.....+..+|-+.-..|+|+|++|++-. .-...+.+.+....|...... .++ --.++.+.+
T Consensus 93 ---~Gg~~i~~Il~~~~~~L~~~~~lVlq~~-~~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~~ 157 (225)
T 3kr9_A 93 ---MGGRLIARILEEGLGKLANVERLILQPN-NREDDLRIWLQDHGFQIVAESILEEAGKFYEILVVEA 157 (225)
T ss_dssp ---ECHHHHHHHHHHTGGGCTTCCEEEEEES-SCHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ---CChHHHHHHHHHHHHHhCCCCEEEEECC-CCHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEe
Confidence 1234577999999999999999999766 457788888889999975332 112 245666665
No 225
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.98 E-value=1.9e-06 Score=77.73 Aligned_cols=123 Identities=17% Similarity=0.104 Sum_probs=69.5
Q ss_pred CceEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHhhCccc--ccccccccC-CCC---Ccchhhhhhhhh
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESF-NTY---PRTYDLLHADHL 141 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f-~ty---PrtyDllH~~~l 141 (223)
.-.+|||+|||+|+|+.+++.. .|+.+.++|.......+-+...|+.. +++.-++.+ +.. +.+||+|.++--
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP 288 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP 288 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCC
Confidence 3568999999999999988876 45555554432221222222335532 222111111 111 468999888532
Q ss_pred hcccccc------cchhHHHHhhhhcccCCcEEEEeccHH------HHHHHHHHHHhCCCeeE
Q 027471 142 FSTIKKR------CSLKAVVAEVDRILRPDGNLILRDDAE------TIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 142 fs~~~~r------C~i~~vl~E~DRILRPgG~~ii~D~~~------~~~~i~~i~~~l~W~~~ 192 (223)
....... -....++.++-|+|+|||.+++..... ....+++.+.....+..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 351 (382)
T 1wxx_A 289 AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLR 351 (382)
T ss_dssp CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 1111000 123478999999999999999984322 23455555555554443
No 226
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.94 E-value=3e-06 Score=76.25 Aligned_cols=116 Identities=11% Similarity=0.035 Sum_probs=71.4
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCc--ccc-cccccccCCC-CCcchhhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGL--FGL-YHDWCESFNT-YPRTYDLLHADHLF 142 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGL--i~~-~~dwce~f~t-yPrtyDllH~~~lf 142 (223)
-.+|||+| |.|.++.+|+.. .|+.+.+.|..-....+.+.+.|+ +-+ ..|..+.++. ++.+||+|-++..|
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 46899999 999999888754 355555544322112222223365 332 3343333443 34699999887666
Q ss_pred cccccccchhHHHHhhhhcccCCc-EEEEecc-----HHHHHHHHHHHH-hCCCee
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDG-NLILRDD-----AETIVEVEDLVK-SLHWDV 191 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG-~~ii~D~-----~~~~~~i~~i~~-~l~W~~ 191 (223)
+... ...++.++-|+||||| .+++.-. ......+++++. .+....
T Consensus 252 ~~~~----~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 252 TLEA----IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp SHHH----HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEE
T ss_pred chHH----HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcch
Confidence 5432 4689999999999999 4455422 222366777766 666554
No 227
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.94 E-value=6.4e-06 Score=75.55 Aligned_cols=110 Identities=13% Similarity=0.243 Sum_probs=65.8
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh----CcccccccccccCCC----CC-cchhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER----GLFGLYHDWCESFNT----YP-RTYDLLH 137 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR----GLi~~~~dwce~f~t----yP-rtyDllH 137 (223)
-.+|||+|||.|+++..|++. .|+.+.+.+. .++.+.++ |+.- .-.|..+.. ++ ..||+|-
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~----~l~~~~~~~~~~g~~~--~~~~~D~~~~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQ----RLSRVYDNLKRLGMKA--TVKQGDGRYPSQWCGEQQFDRIL 320 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTT----THHHHHHHHHHTTCCC--EEEECCTTCTHHHHTTCCEEEEE
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHH----HHHHHHHHHHHcCCCe--EEEeCchhhchhhcccCCCCEEE
Confidence 358999999999999888764 4666666554 33333332 6521 111223332 34 6899987
Q ss_pred hh------hhhccccc------ccch-------hHHHHhhhhcccCCcEEEEec----cHHHHHHHHHHHHh
Q 027471 138 AD------HLFSTIKK------RCSL-------KAVVAEVDRILRPDGNLILRD----DAETIVEVEDLVKS 186 (223)
Q Consensus 138 ~~------~lfs~~~~------rC~i-------~~vl~E~DRILRPgG~~ii~D----~~~~~~~i~~i~~~ 186 (223)
++ +.+.+..+ ...+ ..+|.++-|+|||||.+++++ +.+....++.+++.
T Consensus 321 ~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~ 392 (429)
T 1sqg_A 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 (429)
T ss_dssp EECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred EeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHh
Confidence 53 22221110 0011 378999999999999999974 23334556666554
No 228
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.93 E-value=2.4e-06 Score=77.29 Aligned_cols=121 Identities=16% Similarity=0.074 Sum_probs=68.9
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCc-cc---ccc-cccccCCCC---Ccchhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGL-FG---LYH-DWCESFNTY---PRTYDLLHAD 139 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGL-i~---~~~-dwce~f~ty---PrtyDllH~~ 139 (223)
-.+|||+|||+|+|+.++++.+ |+.+.++|..-....+-+...|+ -. ++. |..+.++.+ +..||+|.++
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~d 300 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEEC
Confidence 3589999999999999998773 55565544322212222223355 21 222 211111111 3589999886
Q ss_pred hhhccc------ccccchhHHHHhhhhcccCCcEEEEeccH------HHHHHHHHHHHhCCCee
Q 027471 140 HLFSTI------KKRCSLKAVVAEVDRILRPDGNLILRDDA------ETIVEVEDLVKSLHWDV 191 (223)
Q Consensus 140 ~lfs~~------~~rC~i~~vl~E~DRILRPgG~~ii~D~~------~~~~~i~~i~~~l~W~~ 191 (223)
--+... ........++.++-|+|+|||.++++... +....+++.+.....+.
T Consensus 301 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 301 PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDV 364 (396)
T ss_dssp CSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeE
Confidence 322110 01133468899999999999999997432 22445555555554443
No 229
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.91 E-value=2.3e-06 Score=76.25 Aligned_cols=94 Identities=13% Similarity=-0.003 Sum_probs=57.5
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhcccccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKKR 148 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~~r 148 (223)
-.+|||+|||+|+|+.. ++.. |+.+.++|.......+-+...|+..-+.-.|.....++.+||+|-++.-.
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~------ 268 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPK------ 268 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTT------
T ss_pred CCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcH------
Confidence 35899999999999999 7653 55555544322212222333455221111122333334889998875211
Q ss_pred cchhHHHHhhhhcccCCcEEEEec
Q 027471 149 CSLKAVVAEVDRILRPDGNLILRD 172 (223)
Q Consensus 149 C~i~~vl~E~DRILRPgG~~ii~D 172 (223)
....++.++-|+|+|||.+++.+
T Consensus 269 -~~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 269 -FAHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp -TGGGGHHHHHHHEEEEEEEEEEE
T ss_pred -hHHHHHHHHHHHcCCCCEEEEEE
Confidence 12378889999999999998863
No 230
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.90 E-value=4e-06 Score=77.58 Aligned_cols=120 Identities=15% Similarity=0.238 Sum_probs=69.5
Q ss_pred cCCCCCCceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhh----Cccc--cc-ccccccCCC-CC
Q 027471 64 MGINWSFVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYER----GLFG--LY-HDWCESFNT-YP 130 (223)
Q Consensus 64 l~i~~~~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eR----GLi~--~~-~dwce~f~t-yP 130 (223)
+++..+ ..|||+|||.|+++..|++. .|+.+.+.+. .++.+.++ |+.. ++ .|.. .++. ++
T Consensus 255 l~~~~g--~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~----~l~~~~~~~~~~g~~~v~~~~~D~~-~~~~~~~ 327 (450)
T 2yxl_A 255 LDPKPG--ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKM----RMKRLKDFVKRMGIKIVKPLVKDAR-KAPEIIG 327 (450)
T ss_dssp HCCCTT--CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHH----HHHHHHHHHHHTTCCSEEEECSCTT-CCSSSSC
T ss_pred cCCCCc--CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHH----HHHHHHHHHHHcCCCcEEEEEcChh-hcchhhc
Confidence 344444 47999999999999888762 3555555433 33333332 6632 22 2222 2222 55
Q ss_pred -cchhhhhhh------hhhccccc------ccch-------hHHHHhhhhcccCCcEEEEec----cHHHHHHHHHHHHh
Q 027471 131 -RTYDLLHAD------HLFSTIKK------RCSL-------KAVVAEVDRILRPDGNLILRD----DAETIVEVEDLVKS 186 (223)
Q Consensus 131 -rtyDllH~~------~lfs~~~~------rC~i-------~~vl~E~DRILRPgG~~ii~D----~~~~~~~i~~i~~~ 186 (223)
.+||+|-++ +++....+ .-.+ ..+|.++-|+|||||.+++++ +.+....++.+++.
T Consensus 328 ~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~ 407 (450)
T 2yxl_A 328 EEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNV 407 (450)
T ss_dssp SSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred cCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHh
Confidence 789998853 22221110 0011 368999999999999999862 23344566666665
Q ss_pred C-CCe
Q 027471 187 L-HWD 190 (223)
Q Consensus 187 l-~W~ 190 (223)
. .++
T Consensus 408 ~~~~~ 412 (450)
T 2yxl_A 408 HPEFK 412 (450)
T ss_dssp CSSCE
T ss_pred CCCCE
Confidence 4 344
No 231
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.88 E-value=3.6e-06 Score=76.04 Aligned_cols=122 Identities=13% Similarity=0.004 Sum_probs=68.8
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCccc---ccc-cccccCCCC---Ccchhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGLFG---LYH-DWCESFNTY---PRTYDLLHADH 140 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGLi~---~~~-dwce~f~ty---PrtyDllH~~~ 140 (223)
-.+|||+|||+|+|+.++++.+ |+.+.++|..-....+-+...|+-. .++ |..+.++.+ +.+||+|.++-
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dp 297 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDP 297 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECC
Confidence 4689999999999999998763 5556655443221222223335431 222 211111111 46899988853
Q ss_pred hhccc-cc-----ccchhHHHHhhhhcccCCcEEEEeccH------HHHHHHHHHHHhCCCeeE
Q 027471 141 LFSTI-KK-----RCSLKAVVAEVDRILRPDGNLILRDDA------ETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 141 lfs~~-~~-----rC~i~~vl~E~DRILRPgG~~ii~D~~------~~~~~i~~i~~~l~W~~~ 192 (223)
-+... .. ......++.++-|+|+|||.+++.... .....+.+.+........
T Consensus 298 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 361 (396)
T 2as0_A 298 PAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLK 361 (396)
T ss_dssp CCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 21110 00 022457899999999999999887332 123445555555544443
No 232
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.87 E-value=2.5e-06 Score=80.46 Aligned_cols=101 Identities=18% Similarity=0.225 Sum_probs=59.2
Q ss_pred CceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHh-hCccc--ccccccccCCC-CCcchhhhhhh-
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYE-RGLFG--LYHDWCESFNT-YPRTYDLLHAD- 139 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~e-RGLi~--~~~dwce~f~t-yPrtyDllH~~- 139 (223)
.-.+|||||||.|+.+..|++. .|+.+.+.+.... .+.-..+ .|+.. +++.-...++. .+.+||.|-++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~-~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVK-VLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHH-HHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHH-HHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 3458999999999998888753 3555555433222 2222222 36632 33321222333 45789998763
Q ss_pred -----hhhcccccc-----------c--chhHHHHhhhhcccCCcEEEEe
Q 027471 140 -----HLFSTIKKR-----------C--SLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 140 -----~lfs~~~~r-----------C--~i~~vl~E~DRILRPgG~~ii~ 171 (223)
++|....+. | .-..+|.++-|+|||||.++++
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvys 245 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYS 245 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 233221110 0 0127899999999999999997
No 233
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.86 E-value=1.5e-05 Score=71.15 Aligned_cols=100 Identities=12% Similarity=0.058 Sum_probs=58.0
Q ss_pred CCceEEEeeCCch--HHHHH----HhhC-CCeEEEEecCCCCCCChhhHHhhC--cccccccccccCCCC---------C
Q 027471 69 SFVRNVMDMRAVY--GGFAA----ALKD-LKVWVMNVVPIESPDTLPIIYERG--LFGLYHDWCESFNTY---------P 130 (223)
Q Consensus 69 ~~iRnvLDmgaG~--GgFAA----~L~~-~~V~vmnv~p~~~~~~l~~i~eRG--Li~~~~dwce~f~ty---------P 130 (223)
..+|.+||+|||. +++-. .+.. -.|+.+..+|..-....+...+.+ -+..++ ..+... .
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~---aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVE---ADMLDPASILDAPELR 153 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEE---CCTTCHHHHHTCHHHH
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEE---ecccChhhhhcccccc
Confidence 3589999999997 33323 2322 246666666653322222222211 111222 222221 2
Q ss_pred cchhh-----hhhhhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 131 RTYDL-----LHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 131 rtyDl-----lH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
++||+ |-+..+|++..+.-....+|.++-|.|+|||+|+++
T Consensus 154 ~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls 199 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMS 199 (277)
T ss_dssp TTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEE
T ss_pred cccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEE
Confidence 45663 556777777766433457999999999999999998
No 234
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.81 E-value=2.9e-06 Score=80.12 Aligned_cols=117 Identities=19% Similarity=0.207 Sum_probs=66.1
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCcc-cccccccccCCC-CCcchhhhhhh----
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLF-GLYHDWCESFNT-YPRTYDLLHAD---- 139 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi-~~~~dwce~f~t-yPrtyDllH~~---- 139 (223)
-..|||+|||.|+.+.+|++. .|+.+.+.+.......+.+...|+- -+++.-...++. ++.+||+|-++
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcS 181 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCS 181 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCC
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcC
Confidence 457999999999999888743 3555555443222112222223653 222211112332 46889998742
Q ss_pred --hhhcccccc-----------c--chhHHHHhhhhcccCCcEEEEe----ccHHHHHHHHHHHHhC
Q 027471 140 --HLFSTIKKR-----------C--SLKAVVAEVDRILRPDGNLILR----DDAETIVEVEDLVKSL 187 (223)
Q Consensus 140 --~lfs~~~~r-----------C--~i~~vl~E~DRILRPgG~~ii~----D~~~~~~~i~~i~~~l 187 (223)
++|....+. | .-..+|.++-|+|||||.++++ ...+.-..++.+++..
T Consensus 182 g~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~ 248 (464)
T 3m6w_A 182 GEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAH 248 (464)
T ss_dssp CGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHC
Confidence 233221110 0 0147899999999999999996 2233445566666554
No 235
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.76 E-value=5.7e-06 Score=75.21 Aligned_cols=119 Identities=15% Similarity=0.100 Sum_probs=68.4
Q ss_pred eEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCccc----ccc-cccccCCCC---Ccchhhhhhhh
Q 027471 72 RNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGLFG----LYH-DWCESFNTY---PRTYDLLHADH 140 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGLi~----~~~-dwce~f~ty---PrtyDllH~~~ 140 (223)
.+|||+|||+|+|+.++++.+ |+.+.++|..-....+-+...|+-+ ++. |.-+.++.. ..+||+|-++-
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DP 293 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDP 293 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECC
Confidence 589999999999999998753 5666666553322222233345531 222 211111212 24899988753
Q ss_pred hhcc-----ccc-ccchhHHHHhhhhcccCCcEEEEeccHH------HHHHHHHHHHhCCCe
Q 027471 141 LFST-----IKK-RCSLKAVVAEVDRILRPDGNLILRDDAE------TIVEVEDLVKSLHWD 190 (223)
Q Consensus 141 lfs~-----~~~-rC~i~~vl~E~DRILRPgG~~ii~D~~~------~~~~i~~i~~~l~W~ 190 (223)
-... ..+ ...+..++.++-|+|+|||.++++.... ....++..++....+
T Consensus 294 P~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 294 PSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp CCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 2211 111 1123357888899999999999984322 344555556666555
No 236
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.73 E-value=3.7e-06 Score=79.18 Aligned_cols=120 Identities=17% Similarity=0.215 Sum_probs=68.1
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCccc--ccccccccCCC-CCcchhhhhhhh--
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESFNT-YPRTYDLLHADH-- 140 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f~t-yPrtyDllH~~~-- 140 (223)
-..|||||||.|+.+.+|++. .|+.+.+.+.......+-+...|+-. +++.-...+.. ++.+||+|-++-
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPC 185 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCC
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCC
Confidence 357999999999998877653 35555554432221222222346532 22221122332 468899987532
Q ss_pred ----hhccccc-----------cc--chhHHHHhhhhcccCCcEEEEe----ccHHHHHHHHHHHHhCCCe
Q 027471 141 ----LFSTIKK-----------RC--SLKAVVAEVDRILRPDGNLILR----DDAETIVEVEDLVKSLHWD 190 (223)
Q Consensus 141 ----lfs~~~~-----------rC--~i~~vl~E~DRILRPgG~~ii~----D~~~~~~~i~~i~~~l~W~ 190 (223)
+|..-.+ .| .-..+|.++-|+|||||.++++ ...+.-..|+.+++...++
T Consensus 186 Sg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~ 256 (456)
T 3m4x_A 186 SGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVT 256 (456)
T ss_dssp CCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCE
Confidence 2221100 00 0127899999999999999996 2334455666776665433
No 237
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.73 E-value=2.3e-05 Score=69.30 Aligned_cols=139 Identities=12% Similarity=0.057 Sum_probs=78.6
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC---------CeEEEEecCCCCCCChhhHHhhCccc-ccccccccCCCCC-cchhhh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL---------KVWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYP-RTYDLL 136 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~---------~V~vmnv~p~~~~~~l~~i~eRGLi~-~~~dwce~f~tyP-rtyDll 136 (223)
.....+|||.|||+|+|+.++.++ .|..+.+.|....-...-+..+|+-. +++ +..|...+ ..||+|
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~--~D~l~~~~~~~fD~I 205 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLH--QDGLANLLVDPVDVV 205 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEE--SCTTSCCCCCCEEEE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEE--CCCCCccccCCccEE
Confidence 345678999999999998877643 24444443332111111122346522 222 23455444 889999
Q ss_pred hhhhhhcccccc-------------c-chh-HHHHhhhhcccCCcEEEEeccH-----HHHHHHHHHHHhCCCeeEEee-
Q 027471 137 HADHLFSTIKKR-------------C-SLK-AVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWDVRMIY- 195 (223)
Q Consensus 137 H~~~lfs~~~~r-------------C-~i~-~vl~E~DRILRPgG~~ii~D~~-----~~~~~i~~i~~~l~W~~~~~~- 195 (223)
-+.--|+.+... . ... .++.++-+.|+|||.+++..+. .....+.+.+..-.|-..+..
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~l 285 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKL 285 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEEC
T ss_pred EECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeeeC
Confidence 988777544211 0 011 4788999999999999887422 223566665544445322211
Q ss_pred -------cCCCeeEEEEEec
Q 027471 196 -------TNDNQGMLCVHKT 208 (223)
Q Consensus 196 -------~~~~e~~L~~~K~ 208 (223)
+.-..-+++.+|.
T Consensus 286 p~~~F~~~~~~~~i~vl~k~ 305 (344)
T 2f8l_A 286 PETLFKSEQARKSILILEKA 305 (344)
T ss_dssp CGGGSCC-CCCEEEEEEEEC
T ss_pred ChhhccCCCCceEEEEEECC
Confidence 1224667777774
No 238
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.73 E-value=3.9e-05 Score=66.45 Aligned_cols=131 Identities=11% Similarity=0.094 Sum_probs=85.3
Q ss_pred eEEEeeCCchHHHHHHhhCCC----eEEEEecCCCCCCChhhHHhhCcccccccc-cccCCCC-Cc-chhhhhhhhhhcc
Q 027471 72 RNVMDMRAVYGGFAAALKDLK----VWVMNVVPIESPDTLPIIYERGLFGLYHDW-CESFNTY-PR-TYDLLHADHLFST 144 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~----V~vmnv~p~~~~~~l~~i~eRGLi~~~~dw-ce~f~ty-Pr-tyDllH~~~lfs~ 144 (223)
.+|+|+|||+|-++.+|++.+ |+.+.+.|.--....+-+...|+-.-+.-- +..|... |. .||+|-.++
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG---- 98 (230)
T 3lec_A 23 ARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG---- 98 (230)
T ss_dssp EEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE----
T ss_pred CEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC----
Confidence 679999999999999998863 667777655333344444556763311111 1233333 33 699865431
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeEEee----cCCCeeEEEEEec
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMIY----TNDNQGMLCVHKT 208 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~~~~----~~~~e~~L~~~K~ 208 (223)
.....|..+|-+.-+.|+|+|+||++-... .+.+.+.+....|...... ...--.++.+.+.
T Consensus 99 -mGg~lI~~IL~~~~~~l~~~~~lIlqp~~~-~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~~~ 164 (230)
T 3lec_A 99 -MGGRLIADILNNDIDKLQHVKTLVLQPNNR-EDDLRKWLAANDFEIVAEDILTENDKRYEILVVKHG 164 (230)
T ss_dssp -ECHHHHHHHHHHTGGGGTTCCEEEEEESSC-HHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEEEC
T ss_pred -CchHHHHHHHHHHHHHhCcCCEEEEECCCC-hHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 123456789999999999999999997543 6788888889999976332 2223456677664
No 239
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.70 E-value=7.8e-05 Score=66.47 Aligned_cols=108 Identities=15% Similarity=0.237 Sum_probs=65.7
Q ss_pred eEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCC-C-cchhhhhhhhhhcc
Q 027471 72 RNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTY-P-RTYDLLHADHLFST 144 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~ty-P-rtyDllH~~~lfs~ 144 (223)
.+|||+|||+|+|+.++.++ .|+.+.+.|....-. .. +.+++ +.+-.+ + ..||+|-|.--|..
T Consensus 41 ~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------~~-~~~~~---~D~~~~~~~~~fD~Ii~NPPy~~ 110 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------PW-AEGIL---ADFLLWEPGEAFDLILGNPPYGI 110 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------TT-EEEEE---SCGGGCCCSSCEEEEEECCCCCC
T ss_pred CEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------CC-CcEEe---CChhhcCccCCCCEEEECcCccC
Confidence 38999999999999998853 567777766544322 11 11222 222222 2 68999888432221
Q ss_pred ccc------------c-------------c-chhHHHHhhhhcccCCcEEEEeccHH-----HHHHHHHHHHhCCC
Q 027471 145 IKK------------R-------------C-SLKAVVAEVDRILRPDGNLILRDDAE-----TIVEVEDLVKSLHW 189 (223)
Q Consensus 145 ~~~------------r-------------C-~i~~vl~E~DRILRPgG~~ii~D~~~-----~~~~i~~i~~~l~W 189 (223)
... + - ....++..+-|+|+|||.+++--+.. ...++.+.+..-++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 111 VGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp BSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred cccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 111 0 0 11266888999999999998864433 34567776555566
No 240
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.68 E-value=4.1e-05 Score=66.86 Aligned_cols=131 Identities=10% Similarity=0.063 Sum_probs=83.7
Q ss_pred eEEEeeCCchHHHHHHhhCCC----eEEEEecCCCCCCChhhHHhhCccccccc-ccccCCCCC-c-chhhhhhhhhhcc
Q 027471 72 RNVMDMRAVYGGFAAALKDLK----VWVMNVVPIESPDTLPIIYERGLFGLYHD-WCESFNTYP-R-TYDLLHADHLFST 144 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~----V~vmnv~p~~~~~~l~~i~eRGLi~~~~d-wce~f~tyP-r-tyDllH~~~lfs~ 144 (223)
-+|+|+|||+|-++.+|++.+ |+.+.+.|.--....+-+...|+-..+.- -+..|...+ . .||+|-..+
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag---- 98 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG---- 98 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE----
T ss_pred CEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC----
Confidence 579999999999999998863 66677765533323333444577431111 112344333 4 599765431
Q ss_pred cccccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeEEe----ecCCCeeEEEEEec
Q 027471 145 IKKRCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRMI----YTNDNQGMLCVHKT 208 (223)
Q Consensus 145 ~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~~~----~~~~~e~~L~~~K~ 208 (223)
.....+..+|-+.-+.|+|+|+||++-.. -.+.+.+.+....|.+... +...--.+|.+.+.
T Consensus 99 -mGg~lI~~IL~~~~~~L~~~~~lIlq~~~-~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~~~ 164 (244)
T 3gnl_A 99 -MGGTLIRTILEEGAAKLAGVTKLILQPNI-AAWQLREWSEQNNWLITSEAILREDNKVYEIMVLAPS 164 (244)
T ss_dssp -ECHHHHHHHHHHTGGGGTTCCEEEEEESS-CHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred -CchHHHHHHHHHHHHHhCCCCEEEEEcCC-ChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 12345678999999999999999999653 4677888888889987422 12223456666653
No 241
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.67 E-value=1.6e-05 Score=70.31 Aligned_cols=134 Identities=13% Similarity=0.091 Sum_probs=77.9
Q ss_pred chhHhhhhHHHHHhhhhhhccCCCCCCceEEEeeCCchHHHHHHhhCC---CeEEEEecCCCCCCChhhHH-hhCccccc
Q 027471 44 DFTADYQHWKNVVSKSYLNGMGINWSFVRNVMDMRAVYGGFAAALKDL---KVWVMNVVPIESPDTLPIIY-ERGLFGLY 119 (223)
Q Consensus 44 ~f~~D~~~W~~~v~~~Y~~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~---~V~vmnv~p~~~~~~l~~i~-eRGLi~~~ 119 (223)
.|..+....++++.+ + ++. -..||||+||+|+||-.++.+ .|+...+.|..-. .++.+. .-|+-..+
T Consensus 107 ~f~~~~~~er~ri~~-~-----~~~--g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~-~~~~N~~~N~v~~~v 177 (278)
T 3k6r_A 107 MFSPANVKERVRMAK-V-----AKP--DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFK-FLVENIHLNKVEDRM 177 (278)
T ss_dssp CCCGGGHHHHHHHHH-H-----CCT--TCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHH-HHHHHHHHTTCTTTE
T ss_pred EEcCCcHHHHHHHHH-h-----cCC--CCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHH-HHHHHHHHcCCCCcE
Confidence 355555555556554 2 223 357999999999998766554 4555555443222 222222 23553322
Q ss_pred ccccccCCCCC--cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc-------HHHHHHHHHHHHhCCCe
Q 027471 120 HDWCESFNTYP--RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD-------AETIVEVEDLVKSLHWD 190 (223)
Q Consensus 120 ~dwce~f~tyP--rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~-------~~~~~~i~~i~~~l~W~ 190 (223)
.-.|+....++ ..||.|-+....+ ....|-+.-++|+|||++.+-+. ....+.++++++...++
T Consensus 178 ~~~~~D~~~~~~~~~~D~Vi~~~p~~-------~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 178 SAYNMDNRDFPGENIADRILMGYVVR-------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYD 250 (278)
T ss_dssp EEECSCTTTCCCCSCEEEEEECCCSS-------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCE
T ss_pred EEEeCcHHHhccccCCCEEEECCCCc-------HHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCc
Confidence 22223333343 7788766542222 23566677799999999876421 22357788888888888
Q ss_pred eEE
Q 027471 191 VRM 193 (223)
Q Consensus 191 ~~~ 193 (223)
+..
T Consensus 251 v~~ 253 (278)
T 3k6r_A 251 VEK 253 (278)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 242
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.65 E-value=3.5e-06 Score=73.41 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=52.1
Q ss_pred ceEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCC-cchhhhhhhhhhc----
Q 027471 71 VRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFS---- 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP-rtyDllH~~~lfs---- 143 (223)
-.+|||+|||.|.++.+|+++ .|+++.+.+.......+...+.|+..-+.=-|..+..++ .+||+|-|...++
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~fD~vv~nlpy~~~~~ 108 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSP 108 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCCCSEEEEECCGGGHHH
T ss_pred CCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchhhcEEEEecCcccchH
Confidence 458999999999999999876 466666644322211111222233111111123333333 4789888753222
Q ss_pred -------cccc-ccchhHHHHhh--hhcccCCcEEEE
Q 027471 144 -------TIKK-RCSLKAVVAEV--DRILRPDGNLIL 170 (223)
Q Consensus 144 -------~~~~-rC~i~~vl~E~--DRILRPgG~~ii 170 (223)
+... +..+..+=.|+ .|+|+|||.++.
T Consensus 109 ~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 109 FVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYC 145 (285)
T ss_dssp HHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCS
T ss_pred HHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccc
Confidence 1111 00000111355 379999998753
No 243
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.62 E-value=2.8e-05 Score=70.17 Aligned_cols=121 Identities=9% Similarity=0.080 Sum_probs=74.0
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhhCcc---cccccccccCCCCCcchhhhhhhh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYERGLF---GLYHDWCESFNTYPRTYDLLHADH 140 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eRGLi---~~~~dwce~f~tyPrtyDllH~~~ 140 (223)
+..-..|||+|||+|+++..++.. .|+.+.+.|.......+-+...|+- -+.+.-...++..+.+||+|-|+-
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 334568999999999999888765 4666777655433233344455762 233321222332338999999975
Q ss_pred hhcccc-cc----cchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeE
Q 027471 141 LFSTIK-KR----CSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 141 lfs~~~-~r----C~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~ 192 (223)
-|..-. .. .....++.++-|+| +|+.++++...+. +++.+....|+..
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~~~~~---~~~~~~~~G~~~~ 347 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFITTEKKA---IEEAIAENGFEII 347 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE-EEEEEEEESCHHH---HHHHHHHTTEEEE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEECCHHH---HHHHHHHcCCEEE
Confidence 554321 11 11257889999999 6666666665544 4456777888764
No 244
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=97.56 E-value=3.4e-05 Score=71.54 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=59.4
Q ss_pred ceEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCC-cchhhhhhhhhhccccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP-RTYDLLHADHLFSTIKK 147 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP-rtyDllH~~~lfs~~~~ 147 (223)
-.+|||+|||+|.|+..|++. .|+.+.+++.......+-+...|+- +.-.|..+..++ .+||+|-++--
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~~~fD~Vv~dPP------ 362 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSVKGFDTVIVDPP------ 362 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCCTTCSEEEECCC------
T ss_pred CCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCccCCCEEEEcCC------
Confidence 458999999999999999877 4566666544322222222334552 221223333333 58998877522
Q ss_pred ccchh-HHHHhhhhcccCCcEEEEeccHHHH
Q 027471 148 RCSLK-AVVAEVDRILRPDGNLILRDDAETI 177 (223)
Q Consensus 148 rC~i~-~vl~E~DRILRPgG~~ii~D~~~~~ 177 (223)
|..+. .++..+ +.|+|||.++++-....+
T Consensus 363 r~g~~~~~~~~l-~~l~p~givyvsc~p~tl 392 (425)
T 2jjq_A 363 RAGLHPRLVKRL-NREKPGVIVYVSCNPETF 392 (425)
T ss_dssp TTCSCHHHHHHH-HHHCCSEEEEEESCHHHH
T ss_pred ccchHHHHHHHH-HhcCCCcEEEEECChHHH
Confidence 22223 345455 459999999999777664
No 245
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.50 E-value=9.7e-06 Score=79.69 Aligned_cols=104 Identities=14% Similarity=0.168 Sum_probs=62.2
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhhCcc----ccc-ccccccCCCCCcchhhhhhhhh-
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYERGLF----GLY-HDWCESFNTYPRTYDLLHADHL- 141 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eRGLi----~~~-~dwce~f~tyPrtyDllH~~~l- 141 (223)
-.+|||+|||+|+|+-+++..+ |+.+.++|..-....+-+..-|+- -.+ .|..+.++....+||+|-++--
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 619 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCS
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCcc
Confidence 3589999999999998887653 666666554322122222233553 122 2221112223478999887532
Q ss_pred hccc-------ccccchhHHHHhhhhcccCCcEEEEeccH
Q 027471 142 FSTI-------KKRCSLKAVVAEVDRILRPDGNLILRDDA 174 (223)
Q Consensus 142 fs~~-------~~rC~i~~vl~E~DRILRPgG~~ii~D~~ 174 (223)
|+.. ........++.++-|+|+|||.++++...
T Consensus 620 f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 620 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp BC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 2211 11123457899999999999999998554
No 246
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.43 E-value=0.0006 Score=62.69 Aligned_cols=115 Identities=16% Similarity=0.186 Sum_probs=68.0
Q ss_pred ceEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHhhCcc--c-ccccccccCCC--CC-cchhhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYERGLF--G-LYHDWCESFNT--YP-RTYDLLHADHLF 142 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eRGLi--~-~~~dwce~f~t--yP-rtyDllH~~~lf 142 (223)
-.+|||+|||.|.|+.+|+++ .|+.+.+++..-....+-+...|+- - ...|+.+.++. ++ .+||+|-++
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d--- 363 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD--- 363 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC---
T ss_pred CCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC---
Confidence 357999999999999999987 4555665544222122222334542 2 23344343433 23 689998775
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeE
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~ 192 (223)
.++-....++..+.+ ++|++.++++-+...+.+--.++..-.|...
T Consensus 364 ---PPr~g~~~~~~~l~~-~~p~~ivyvsc~p~tlard~~~l~~~Gy~~~ 409 (433)
T 1uwv_A 364 ---PARAGAAGVMQQIIK-LEPIRIVYVSCNPATLARDSEALLKAGYTIA 409 (433)
T ss_dssp ---CCTTCCHHHHHHHHH-HCCSEEEEEESCHHHHHHHHHHHHHTTCEEE
T ss_pred ---CCCccHHHHHHHHHh-cCCCeEEEEECChHHHHhhHHHHHHCCcEEE
Confidence 122222344444433 7899999999888876544444444456653
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.40 E-value=4.3e-05 Score=67.04 Aligned_cols=90 Identities=12% Similarity=0.165 Sum_probs=50.4
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHh----hCcccccccccccCCCCC-cchhhhhhhhhhc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYE----RGLFGLYHDWCESFNTYP-RTYDLLHADHLFS 143 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~e----RGLi~~~~dwce~f~tyP-rtyDllH~~~lfs 143 (223)
-.+|||+|||.|.++..|++++ |+.+.+.+. .++.+.+ .|+.. +.=-|..+..+| .+||+|-|+-.+.
T Consensus 43 ~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~----~~~~a~~~~~~~~~~~-v~~~~~D~~~~~~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSR----MISEVKKRCLYEGYNN-LEVYEGDAIKTVFPKFDVCTANIPYK 117 (299)
T ss_dssp TCEEEEECCTTSTTHHHHTTTSSEEEEECSCHH----HHHHHHHHHHHTTCCC-EEC----CCSSCCCCCSEEEEECCGG
T ss_pred cCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHH----HHHHHHHHHHHcCCCc-eEEEECchhhCCcccCCEEEEcCCcc
Confidence 4589999999999999999884 444444333 3333322 35422 111123444444 6899987753333
Q ss_pred ccccccchhHHH---------------HhhhhcccCCcE
Q 027471 144 TIKKRCSLKAVV---------------AEVDRILRPDGN 167 (223)
Q Consensus 144 ~~~~rC~i~~vl---------------~E~DRILRPgG~ 167 (223)
...+ .+..++ .+.+|++.|+|.
T Consensus 118 ~~~~--~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~ 154 (299)
T 2h1r_A 118 ISSP--LIFKLISHRPLFKCAVLMFQKEFAERMLANVGD 154 (299)
T ss_dssp GHHH--HHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTS
T ss_pred cccH--HHHHHHhcCCccceeeehHHHHHHHHHhcCCCC
Confidence 2111 111222 447899999885
No 248
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.39 E-value=6.3e-05 Score=69.31 Aligned_cols=43 Identities=19% Similarity=0.365 Sum_probs=33.7
Q ss_pred CC-cchhhhhhhhhhccccc-cc----------------------------------chhHHHHhhhhcccCCcEEEEe
Q 027471 129 YP-RTYDLLHADHLFSTIKK-RC----------------------------------SLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 129 yP-rtyDllH~~~lfs~~~~-rC----------------------------------~i~~vl~E~DRILRPgG~~ii~ 171 (223)
|| +|||++|++..|+-..+ .+ .+..+|....|.|+|||.++++
T Consensus 146 fP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~ 224 (374)
T 3b5i_A 146 FPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLV 224 (374)
T ss_dssp SCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 77 99999999988875442 12 2234688889999999999997
No 249
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.38 E-value=0.00011 Score=66.47 Aligned_cols=135 Identities=13% Similarity=0.079 Sum_probs=75.2
Q ss_pred CceEEEeeCCchHHHHHHhhCC-CeEE---EEecCCC--CCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhc
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL-KVWV---MNVVPIE--SPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFS 143 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~-~V~v---mnv~p~~--~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs 143 (223)
..++|||+||+.|||.-.+.++ +|.- +.+.... .|...+. +.--++ ...+=++.+..-+..+|+|=|+...+
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~-~~~~iv-~~~~~~di~~l~~~~~DlVlsD~APn 158 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQT-LGWNIV-KFKDKSNVFTMPTEPSDTLLCDIGES 158 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCB-TTGGGE-EEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccc-cCCceE-EeecCceeeecCCCCcCEEeecCcCC
Confidence 4689999999999999999986 5432 2222110 1110000 000011 11111122221237899999887766
Q ss_pred ccccc----cchhHHHHhhhhcccCC-cEEEEe-------ccHHHHHHHHHHHHhCCCeeEEeecCCCeeEEEEEe
Q 027471 144 TIKKR----CSLKAVVAEVDRILRPD-GNLILR-------DDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 207 (223)
Q Consensus 144 ~~~~r----C~i~~vl~E~DRILRPg-G~~ii~-------D~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K 207 (223)
...+ -....+|.=+.++|+|| |.|++- +..+.+..++..+++.+...-..-.++.|.|++|..
T Consensus 159 -sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V~~~KPaSR~~S~E~Y~V~~~ 233 (300)
T 3eld_A 159 -SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVPFSRNSTHEMYYISGA 233 (300)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCEEECCTTSCTTCCCEEEESSC
T ss_pred -CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCCcEEEEeCCCCCCChHHeeeccC
Confidence 3221 01113333347899999 999986 233456677777776665543112356899999876
No 250
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.33 E-value=8.2e-05 Score=66.79 Aligned_cols=133 Identities=12% Similarity=0.010 Sum_probs=73.0
Q ss_pred eEEEeeCCchHHHHHHhhC-CCeE---EEEecCCCCCC-ChhhHHhhCcc-cccccccccCCCCC-cchhhhhhhhhhcc
Q 027471 72 RNVMDMRAVYGGFAAALKD-LKVW---VMNVVPIESPD-TLPIIYERGLF-GLYHDWCESFNTYP-RTYDLLHADHLFST 144 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~-~~V~---vmnv~p~~~~~-~l~~i~eRGLi-~~~~dwce~f~tyP-rtyDllH~~~lfs~ 144 (223)
.+|||+|||.|||..+..+ .++- .+.+.. +.+. .+++. .-|-- -...+=++.+ .++ ..+|+|=|+...+
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~-d~~~~pi~~~-~~g~~ii~~~~~~dv~-~l~~~~~DvVLSDmApn- 167 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGV-QGHEKPIMRT-TLGWNLIRFKDKTDVF-NMEVIPGDTLLCDIGES- 167 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC-TTSCCCCCCC-BTTGGGEEEECSCCGG-GSCCCCCSEEEECCCCC-
T ss_pred CEEEEeCCCCCHHHHHHHHhcCCCeeeeEEecc-Cccccccccc-cCCCceEEeeCCcchh-hcCCCCcCEEEecCccC-
Confidence 4799999999999997664 3543 222211 1110 11000 00100 0111111112 234 8899999988777
Q ss_pred cccc----cchhHHHHhhhhcccCC--cEEEEe-------ccHHHHHHHHHHHHhCCCeeEEeecCCCeeEEEEEec
Q 027471 145 IKKR----CSLKAVVAEVDRILRPD--GNLILR-------DDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHKT 208 (223)
Q Consensus 145 ~~~r----C~i~~vl~E~DRILRPg--G~~ii~-------D~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K~ 208 (223)
...+ -....+|.=+.++|+|| |.|++- +..+.+..++..+++.+...-..-.++.|.+++|..+
T Consensus 168 sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~V~~~KPaSR~~S~E~Y~V~~~r 244 (282)
T 3gcz_A 168 SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGGGLVRVPLSRNSTHEMYWVSGTR 244 (282)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCTTSCTTCCCEEEETTCC
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCCEEEEcCCCcccCcceeEEEecC
Confidence 3221 11113444447899999 999986 2234456677777766655431123568999999763
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.25 E-value=7.2e-06 Score=69.16 Aligned_cols=32 Identities=13% Similarity=0.152 Sum_probs=24.3
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCC
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIE 102 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~ 102 (223)
-.+|||+|||.|.++..|++++ |+.+.+.+..
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~ 63 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHL 63 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSS
T ss_pred CCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHH
Confidence 4689999999999999998764 4555554443
No 252
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.19 E-value=0.0003 Score=63.15 Aligned_cols=134 Identities=9% Similarity=0.015 Sum_probs=79.8
Q ss_pred CCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh-CcccccccccccCC-CCCcchhhhhhhhhh
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER-GLFGLYHDWCESFN-TYPRTYDLLHADHLF 142 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR-GLi~~~~dwce~f~-tyPrtyDllH~~~lf 142 (223)
+.-.+|||+|||+|-||..+... .||.+.+.+..-. ..+.++.+ |+...+. +++-.. ..|..||++=+.-+.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le-~a~~~l~~~g~~~~~~-v~D~~~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVG-FVDEALTRLNVPHRTN-VADLLEDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHH-HHHHHHHHTTCCEEEE-ECCTTTSCCCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHH-HHHHHHHhcCCCceEE-EeeecccCCCCCcchHHHHHHH
Confidence 44789999999999999999666 6888888544222 22222233 6654221 222222 245888886444333
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEecc---------H--HHHHHHHHHHHhCCCeeEEeecCCCeeEEEEEe
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILRDD---------A--ETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 207 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~D~---------~--~~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K 207 (223)
.+..+.- ....+++=..|+|+|.||--++ + .+....+..+..--|.+... .-..|-+.+.+|
T Consensus 209 ~~Le~q~--kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~-~~~nEl~y~i~k 281 (281)
T 3lcv_B 209 PCLETQQ--RGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRL-EIGNELIYVIQK 281 (281)
T ss_dssp HHHHHHS--TTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEE-EETTEEEEEEC-
T ss_pred HHhhhhh--hHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeee-eecCeeEEEecC
Confidence 3332210 1344488888999999998877 1 13466777777677765432 224566666554
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.07 E-value=0.00063 Score=62.52 Aligned_cols=121 Identities=14% Similarity=0.136 Sum_probs=69.9
Q ss_pred CceEEEeeCCchHHHHHHhhC-----------------CCeEEEEecCCCCCCChhhHHhhCcc----cccccccccCCC
Q 027471 70 FVRNVMDMRAVYGGFAAALKD-----------------LKVWVMNVVPIESPDTLPIIYERGLF----GLYHDWCESFNT 128 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~-----------------~~V~vmnv~p~~~~~~l~~i~eRGLi----~~~~dwce~f~t 128 (223)
.-.+|+|.+||+|+|..++.+ ..+..+-+.|....-...-...+|+- .+++ +..+..
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~--gD~l~~ 248 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVC--EDSLEK 248 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEE--CCTTTS
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEee--CCCCCC
Confidence 345799999999999877653 34566655443111111112335652 1222 234443
Q ss_pred C-Ccchhhhhhhhhhccccccc------c--------hhHHHHhhhhcccCCcEEEEeccHHH------HHHHHH-HHHh
Q 027471 129 Y-PRTYDLLHADHLFSTIKKRC------S--------LKAVVAEVDRILRPDGNLILRDDAET------IVEVED-LVKS 186 (223)
Q Consensus 129 y-PrtyDllH~~~lfs~~~~rC------~--------i~~vl~E~DRILRPgG~~ii~D~~~~------~~~i~~-i~~~ 186 (223)
- ...||+|-+.--|+.....- . -..++..+-|+|+|||.+.+--+... -.++.+ |++.
T Consensus 249 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~ 328 (445)
T 2okc_A 249 EPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQD 328 (445)
T ss_dssp CCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHH
T ss_pred cccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHHHhc
Confidence 2 25899998887776532210 0 02678889999999999977644332 234554 5666
Q ss_pred CCCeeE
Q 027471 187 LHWDVR 192 (223)
Q Consensus 187 l~W~~~ 192 (223)
...+..
T Consensus 329 ~~l~~i 334 (445)
T 2okc_A 329 FNLHTI 334 (445)
T ss_dssp EEEEEE
T ss_pred CcEEEE
Confidence 555544
No 254
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.03 E-value=0.00091 Score=59.20 Aligned_cols=135 Identities=10% Similarity=-0.041 Sum_probs=79.5
Q ss_pred CCceEEEeeCCchHHHHHHhh-CCCeEEEEecCCCCCCChhhHHhh-CcccccccccccCC-CCCcchhhhhhhhhhccc
Q 027471 69 SFVRNVMDMRAVYGGFAAALK-DLKVWVMNVVPIESPDTLPIIYER-GLFGLYHDWCESFN-TYPRTYDLLHADHLFSTI 145 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~-~~~V~vmnv~p~~~~~~l~~i~eR-GLi~~~~dwce~f~-tyPrtyDllH~~~lfs~~ 145 (223)
+.-.+|||+|||+|-||.++. ...++.+.+.+..-. .++.+..+ |... --..|+... ..|.+||++=+.-+.++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~-~ar~~~~~~g~~~-~~~v~D~~~~~~~~~~DvvLllk~lh~L 181 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGD-VITPFAREKDWDF-TFALQDVLCAPPAEAGDLALIFKLLPLL 181 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHH-HHHHHHHHTTCEE-EEEECCTTTSCCCCBCSEEEEESCHHHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHH-HHHHHHHhcCCCc-eEEEeecccCCCCCCcchHHHHHHHHHh
Confidence 668899999999999999877 336888888655222 22223333 4322 222333443 366899997554333322
Q ss_pred ccccchhHHHHhhhhcccCCcEEEEeccHH-----------HHHHHHHHHHhCCCeeEEeecCCCeeEEEEEec
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLILRDDAE-----------TIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHKT 208 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii~D~~~-----------~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K~ 208 (223)
.+.- ....+++=.-|+|+|.||--++.+ ....++..+..--|.+... .-+.|-+.+.+|.
T Consensus 182 E~q~--~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~-~~~nEl~~~i~~~ 252 (253)
T 3frh_A 182 EREQ--AGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKK-TIGTELIYLIKKN 252 (253)
T ss_dssp HHHS--TTHHHHHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEE-EETTEEEEEEEEC
T ss_pred hhhc--hhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhhe-ecCceEEEEEecC
Confidence 2110 122334445899999988876322 2355666666677766533 2256778777773
No 255
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.01 E-value=0.00028 Score=59.86 Aligned_cols=28 Identities=18% Similarity=0.268 Sum_probs=22.3
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEe
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNV 98 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv 98 (223)
-.+|||+|||+|.++..|++++ |+.+.+
T Consensus 31 ~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~ 60 (244)
T 1qam_A 31 HDNIFEIGSGKGHFTLELVQRCNFVTAIEI 60 (244)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEEEEECS
T ss_pred CCEEEEEeCCchHHHHHHHHcCCeEEEEEC
Confidence 4589999999999999998874 444444
No 256
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.90 E-value=9.1e-05 Score=70.44 Aligned_cols=98 Identities=15% Similarity=0.127 Sum_probs=57.5
Q ss_pred eEEEeeCCchHHHHHHhhCCCeEEE--EecCCCCCCChhhHHhhCccc-cc-ccccccCC-CC-Ccchhhhhhhhhhccc
Q 027471 72 RNVMDMRAVYGGFAAALKDLKVWVM--NVVPIESPDTLPIIYERGLFG-LY-HDWCESFN-TY-PRTYDLLHADHLFSTI 145 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~V~vm--nv~p~~~~~~l~~i~eRGLi~-~~-~dwce~f~-ty-PrtyDllH~~~lfs~~ 145 (223)
-+|||+|||.|-++..|+.+|..|. .+++..-.-...-+.++|... -| +.-.|.+. .+ ++.||+|-|..+|.|.
T Consensus 68 ~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv 147 (569)
T 4azs_A 68 LNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHI 147 (569)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHH
T ss_pred CeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhcC
Confidence 3799999999999999999976554 443331111122234567532 12 22122331 24 4899999999999987
Q ss_pred ccccchhHHHHhhhhcccCCcEEEE
Q 027471 146 KKRCSLKAVVAEVDRILRPDGNLIL 170 (223)
Q Consensus 146 ~~rC~i~~vl~E~DRILRPgG~~ii 170 (223)
.+-..+ .-+..+=+-|+++|..++
T Consensus 148 ~~~~~~-~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 148 VHLHGI-DEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp HHHHCH-HHHHHHHHHHHHHSSEEE
T ss_pred CCHHHH-HHHHHHHHHhccccceee
Confidence 653211 122334455666665554
No 257
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=96.87 E-value=8.9e-05 Score=67.79 Aligned_cols=93 Identities=15% Similarity=0.091 Sum_probs=57.4
Q ss_pred ceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh----------------Cc--ccccc-cccccCC
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER----------------GL--FGLYH-DWCESFN 127 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR----------------GL--i~~~~-dwce~f~ 127 (223)
-.+|||++||+|.++-.++++ .|+...+.|.... ..+.+.++ |+ +-+++ |..+.+.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~-~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYE-LMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHH-HHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHH-HHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 357999999999998887664 3555555443221 22222222 54 22333 2211112
Q ss_pred CCCcchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 128 TYPRTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 128 tyPrtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
..++.||+|.++ .-|....++-..-|.|||||.++++
T Consensus 127 ~~~~~fD~I~lD-------P~~~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 127 ERHRYFHFIDLD-------PFGSPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HSTTCEEEEEEC-------CSSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCCEEEeC-------CCCCHHHHHHHHHHhcCCCCEEEEE
Confidence 234679998876 2344567888888999999999887
No 258
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.52 E-value=0.0011 Score=61.29 Aligned_cols=20 Identities=15% Similarity=0.014 Sum_probs=16.3
Q ss_pred ceEEEeeCCchHHHHHHhhC
Q 027471 71 VRNVMDMRAVYGGFAAALKD 90 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~ 90 (223)
.-+|+|+||+.|..+..+.+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~ 72 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVR 72 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHH
Confidence 67799999999988776543
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=96.39 E-value=0.00059 Score=62.96 Aligned_cols=24 Identities=21% Similarity=0.257 Sum_probs=21.4
Q ss_pred CCceEEEeeCCchHHHHHHhhCCC
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDLK 92 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~~ 92 (223)
..-++|||+|||.|++++.+.+++
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~ 210 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK 210 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCC
Confidence 457899999999999999998875
No 260
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.33 E-value=0.0019 Score=63.51 Aligned_cols=125 Identities=18% Similarity=0.182 Sum_probs=73.7
Q ss_pred CCccchhHhhhhHHH---HHhhhhh-hccC--CCCCCceEEEeeCCchHHH------HHHhhCCC--eEEEEecCCCCCC
Q 027471 40 AAPEDFTADYQHWKN---VVSKSYL-NGMG--INWSFVRNVMDMRAVYGGF------AAALKDLK--VWVMNVVPIESPD 105 (223)
Q Consensus 40 ~~~~~f~~D~~~W~~---~v~~~Y~-~~l~--i~~~~iRnvLDmgaG~GgF------AA~L~~~~--V~vmnv~p~~~~~ 105 (223)
.+.|.|++|.-+-.. -+.+ .+ +... -+..+.-.|||+|||.|-. |++-..++ |+++=-.| .+.-
T Consensus 322 ~tYevFEkD~vKy~~Ye~AI~~-Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~ 399 (637)
T 4gqb_A 322 QTYEVFEKDPIKYSQYQQAIYK-CLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVV 399 (637)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH-HHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHH
T ss_pred hhhhhhcCChhhHHHHHHHHHH-HHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHH
Confidence 468899999866533 3332 22 2221 1234567899999999954 44444443 45543333 2334
Q ss_pred ChhhHHhhCccc---ccccccccCCC--CCcchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEE
Q 027471 106 TLPIIYERGLFG---LYHDWCESFNT--YPRTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLIL 170 (223)
Q Consensus 106 ~l~~i~eRGLi~---~~~dwce~f~t--yPrtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii 170 (223)
+++.+.+.|+-. +++ +.... -|.-.|+|=+- ++...-....+..+|.=.||.|||||.+|=
T Consensus 400 a~~~v~~N~~~dkVtVI~---gd~eev~LPEKVDIIVSE-wMG~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 400 TLENWQFEEWGSQVTVVS---SDMREWVAPEKADIIVSE-LLGSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp HHHHHHHHTTGGGEEEEE---SCTTTCCCSSCEEEEECC-CCBTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred HHHHHHhccCCCeEEEEe---CcceeccCCcccCEEEEE-cCcccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 888888888844 555 34444 56778887662 111111122344667778999999998763
No 261
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.25 E-value=0.02 Score=50.70 Aligned_cols=120 Identities=15% Similarity=0.171 Sum_probs=76.1
Q ss_pred CCceEEEeeCCchHHHHHHhh---------CCCeEEEEecC---CCCCC-----------------------ChhhHHhh
Q 027471 69 SFVRNVMDMRAVYGGFAAALK---------DLKVWVMNVVP---IESPD-----------------------TLPIIYER 113 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~---------~~~V~vmnv~p---~~~~~-----------------------~l~~i~eR 113 (223)
+.-.+||.+|+..|..+..|+ ++.|+++.... ....+ ..+.+..-
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 345689999999999776653 56788887532 11110 12333334
Q ss_pred Cc----ccccc-cccccCCCCC-cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH---HHHHHHHHHH
Q 027471 114 GL----FGLYH-DWCESFNTYP-RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA---ETIVEVEDLV 184 (223)
Q Consensus 114 GL----i~~~~-dwce~f~tyP-rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~---~~~~~i~~i~ 184 (223)
|+ +-++. +-.|.++..+ .+||+||.+.= .+. .....|..+-+.|+|||+++++|-. .....+.++.
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD--~y~---~~~~~Le~~~p~L~pGGiIv~DD~~~~~G~~~Av~Ef~ 259 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD--LYE---STWDTLTNLYPKVSVGGYVIVDDYMMCPPCKDAVDEYR 259 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC--SHH---HHHHHHHHHGGGEEEEEEEEESSCTTCHHHHHHHHHHH
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC--ccc---cHHHHHHHHHhhcCCCEEEEEcCCCCCHHHHHHHHHHH
Confidence 55 22333 3345677776 89999999721 111 1236677788999999999999852 2445677777
Q ss_pred HhCCCeeEE
Q 027471 185 KSLHWDVRM 193 (223)
Q Consensus 185 ~~l~W~~~~ 193 (223)
+...+...+
T Consensus 260 ~~~~i~~~i 268 (282)
T 2wk1_A 260 AKFDIADEL 268 (282)
T ss_dssp HHTTCCSCC
T ss_pred HhcCCceEE
Confidence 777776543
No 262
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=96.16 E-value=0.00059 Score=63.05 Aligned_cols=93 Identities=11% Similarity=0.022 Sum_probs=57.2
Q ss_pred ceEEEeeCCchHHHHHHhhC--CC---eEEEEecCCCCCCChhhHHhh-Cccc----ccc-cccccCC-CCCcchhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKD--LK---VWVMNVVPIESPDTLPIIYER-GLFG----LYH-DWCESFN-TYPRTYDLLHA 138 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~--~~---V~vmnv~p~~~~~~l~~i~eR-GLi~----~~~-dwce~f~-tyPrtyDllH~ 138 (223)
-.+|||++||+|+|+-.++. ++ |+.+.+.|.-.. .++.+.++ |+-. +++ |-.+.+. .++..||+|-+
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~-~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIE-IMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHH-HHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHH-HHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 36799999999999988776 34 444444333221 23333333 4422 222 2111222 34567999988
Q ss_pred hhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 139 DHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 139 ~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
+- -|....++...-+.|+|||.++++
T Consensus 132 DP-------~g~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 132 DP-------FGTPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp CC-------SSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-------CcCHHHHHHHHHHHhCCCCEEEEE
Confidence 73 243457888888999999999997
No 263
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=96.02 E-value=0.0036 Score=56.10 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=22.7
Q ss_pred eEEEeeCCchHHHHHHhhCC--CeEEEEecCC
Q 027471 72 RNVMDMRAVYGGFAAALKDL--KVWVMNVVPI 101 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~ 101 (223)
..|||++||+|+|+.+|++. .|+.+.++|.
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ 246 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNFDRVLATEIAKP 246 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGSSEEEEECCCHH
T ss_pred CEEEEccCCCCHHHHHHHhcCCEEEEEECCHH
Confidence 45999999999999999875 3555554443
No 264
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=95.97 E-value=0.002 Score=54.75 Aligned_cols=107 Identities=13% Similarity=0.073 Sum_probs=55.7
Q ss_pred ceEEEeeCCchHHHHHHhh-CCCeEEEEecCCCCCCChhhHHhhCc-----ccccccc-cc--------------cCCCC
Q 027471 71 VRNVMDMRAVYGGFAAALK-DLKVWVMNVVPIESPDTLPIIYERGL-----FGLYHDW-CE--------------SFNTY 129 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~-~~~V~vmnv~p~~~~~~l~~i~eRGL-----i~~~~dw-ce--------------~f~ty 129 (223)
-++||++||||.+...+.. +..|+++-.-+.-.....+.+.+.|+ +-+++.- .+ +|+.|
T Consensus 31 a~~VLEiGtGySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~ 110 (202)
T 3cvo_A 31 AEVILEYGSGGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDY 110 (202)
T ss_dssp CSEEEEESCSHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHH
T ss_pred CCEEEEECchHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHH
Confidence 5799999999865333322 23444444333222223444555576 3333311 11 13322
Q ss_pred -------C--cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccHH--HHHHHHHHHH
Q 027471 130 -------P--RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDAE--TIVEVEDLVK 185 (223)
Q Consensus 130 -------P--rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~~--~~~~i~~i~~ 185 (223)
+ .+||+|-.++-+. ..| +.+.=+.|||||.+++.+-.. ....++++++
T Consensus 111 ~~~i~~~~~~~~fDlIfIDg~k~---~~~-----~~~~l~~l~~GG~Iv~DNv~~r~~y~~v~~~~~ 169 (202)
T 3cvo_A 111 PLAVWRTEGFRHPDVVLVDGRFR---VGC-----ALATAFSITRPVTLLFDDYSQRRWQHQVEEFLG 169 (202)
T ss_dssp HHGGGGCTTCCCCSEEEECSSSH---HHH-----HHHHHHHCSSCEEEEETTGGGCSSGGGGHHHHC
T ss_pred hhhhhccccCCCCCEEEEeCCCc---hhH-----HHHHHHhcCCCeEEEEeCCcCCcchHHHHHHHh
Confidence 3 6789887764322 123 333448899999998876322 2344555544
No 265
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.73 E-value=0.0046 Score=56.67 Aligned_cols=96 Identities=16% Similarity=0.264 Sum_probs=57.3
Q ss_pred CCceEEEeeCCchHHHHHHhhCC------------------CeEE-EEecCCCCCCCh----h-------hHHhhCcccc
Q 027471 69 SFVRNVMDMRAVYGGFAAALKDL------------------KVWV-MNVVPIESPDTL----P-------IIYERGLFGL 118 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~~------------------~V~v-mnv~p~~~~~~l----~-------~i~eRGLi~~ 118 (223)
...-+|+|+||+.|..+-.+.+. .+.| .|=.|.+--+++ + -.+--|.+
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvp-- 127 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVP-- 127 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEE--
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecc--
Confidence 34566899999999877655443 2443 343343321111 1 11222223
Q ss_pred cccccccCCC--CC-cchhhhhhhhhhccccc-ccch-----------------------------hHHHHhhhhcccCC
Q 027471 119 YHDWCESFNT--YP-RTYDLLHADHLFSTIKK-RCSL-----------------------------KAVVAEVDRILRPD 165 (223)
Q Consensus 119 ~~dwce~f~t--yP-rtyDllH~~~lfs~~~~-rC~i-----------------------------~~vl~E~DRILRPg 165 (223)
++|=. || +++|++|++..++=..+ -+.+ ..+|.-..|.|+||
T Consensus 128 -----gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pG 202 (359)
T 1m6e_X 128 -----GSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPG 202 (359)
T ss_dssp -----SCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTT
T ss_pred -----hhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34433 77 99999999987763332 1111 13366679999999
Q ss_pred cEEEEe
Q 027471 166 GNLILR 171 (223)
Q Consensus 166 G~~ii~ 171 (223)
|.++++
T Consensus 203 G~mvl~ 208 (359)
T 1m6e_X 203 GRMVLT 208 (359)
T ss_dssp CEEEEE
T ss_pred ceEEEE
Confidence 999997
No 266
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=95.37 E-value=0.011 Score=52.48 Aligned_cols=115 Identities=16% Similarity=0.149 Sum_probs=59.7
Q ss_pred ceEEEeeCCchHHHHHHhhCC-----CeEEEEecCCCCCCChhhHHhh-Cccc--ccccccccCCC-CC--cchhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-----KVWVMNVVPIESPDTLPIIYER-GLFG--LYHDWCESFNT-YP--RTYDLLHAD 139 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-----~V~vmnv~p~~~~~~l~~i~eR-GLi~--~~~dwce~f~t-yP--rtyDllH~~ 139 (223)
-..|||++||.|+.+..|++. .|+.+.+.+.... .++-..+| |+-. +++.-...+.. .+ ..||.|-++
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~-~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D 181 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLA-SMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLD 181 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEEC
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHH-HHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEc
Confidence 357999999999998887652 3666666443222 22222333 6532 22211112222 11 478987753
Q ss_pred ------hhhccccc--------ccch-------hHHHHhhhhcccCCcEEEEe----ccHHHHHHHHHHHHhC
Q 027471 140 ------HLFSTIKK--------RCSL-------KAVVAEVDRILRPDGNLILR----DDAETIVEVEDLVKSL 187 (223)
Q Consensus 140 ------~lfs~~~~--------rC~i-------~~vl~E~DRILRPgG~~ii~----D~~~~~~~i~~i~~~l 187 (223)
+.+....+ .-.+ ..+|...-|.|+ ||.++++ ...+.-..|+.+++..
T Consensus 182 ~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~ 253 (309)
T 2b9e_A 182 PSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQN 253 (309)
T ss_dssp CCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTS
T ss_pred CCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhC
Confidence 23321000 0011 256777888886 9999986 2233445566665543
No 267
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=95.31 E-value=0.0033 Score=57.30 Aligned_cols=109 Identities=9% Similarity=0.103 Sum_probs=62.2
Q ss_pred CCCceEEEeeCCchHHHHHHhhC------------------------------------------CCeEEEEecCCCCCC
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKD------------------------------------------LKVWVMNVVPIESPD 105 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~------------------------------------------~~V~vmnv~p~~~~~ 105 (223)
+..-..|||.+||+|+|+..++. ..|+.+.+.|..-.-
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 33457899999999998754422 135666665443222
Q ss_pred ChhhHHhhCcccccccccccCCCC--Ccchhhhhhhhhhcc-cccccchhHHHHhhhhcccC--CcEE-EEeccHHH
Q 027471 106 TLPIIYERGLFGLYHDWCESFNTY--PRTYDLLHADHLFST-IKKRCSLKAVVAEVDRILRP--DGNL-ILRDDAET 176 (223)
Q Consensus 106 ~l~~i~eRGLi~~~~dwce~f~ty--PrtyDllH~~~lfs~-~~~rC~i~~vl~E~DRILRP--gG~~-ii~D~~~~ 176 (223)
..+-+...|+-..++=-|..+..+ |..||+|-|+--|.. ..+.-.+..+..++-++||+ ||.+ +|+.+.+.
T Consensus 273 Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~l 349 (385)
T 3ldu_A 273 ARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYEDF 349 (385)
T ss_dssp HHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCTTH
T ss_pred HHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCHHH
Confidence 333344457643222222333333 478999888655432 22223456788888888887 6655 45554443
No 268
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=95.08 E-value=0.0048 Score=56.49 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=58.6
Q ss_pred CCCceEEEeeCCchHHHH--HHhhCC----------------------------------------CeEEEEecCCCCCC
Q 027471 68 WSFVRNVMDMRAVYGGFA--AALKDL----------------------------------------KVWVMNVVPIESPD 105 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFA--A~L~~~----------------------------------------~V~vmnv~p~~~~~ 105 (223)
+..-..+||.+||+|+|+ |++... .|+.+.+.|.....
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 334578999999999995 333222 26666665543222
Q ss_pred ChhhHHhhCcccccccccccCCC--CCcchhhhhhhhhhcc-cccccchhHHHHhhhhcccC--CcEE-EEeccHH
Q 027471 106 TLPIIYERGLFGLYHDWCESFNT--YPRTYDLLHADHLFST-IKKRCSLKAVVAEVDRILRP--DGNL-ILRDDAE 175 (223)
Q Consensus 106 ~l~~i~eRGLi~~~~dwce~f~t--yPrtyDllH~~~lfs~-~~~rC~i~~vl~E~DRILRP--gG~~-ii~D~~~ 175 (223)
..+-+...|+-..++=-+..+.. .+.+||+|-|+-=|.. ..+.-.+..+..++-++||+ ||.+ +|+.+.+
T Consensus 279 Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~ 354 (393)
T 3k0b_A 279 AKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYEL 354 (393)
T ss_dssp HHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCTT
T ss_pred HHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 23333445664322111122222 3478999888644421 11122345677778888887 6655 4555444
No 269
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=94.80 E-value=0.014 Score=58.47 Aligned_cols=129 Identities=13% Similarity=0.106 Sum_probs=69.1
Q ss_pred CCccchhHhhhhHHHHHhhh--hhhccCCCCCCceEEEeeCCchHHHH------HHhhC---------C--CeEEEEecC
Q 027471 40 AAPEDFTADYQHWKNVVSKS--YLNGMGINWSFVRNVMDMRAVYGGFA------AALKD---------L--KVWVMNVVP 100 (223)
Q Consensus 40 ~~~~~f~~D~~~W~~~v~~~--Y~~~l~i~~~~iRnvLDmgaG~GgFA------A~L~~---------~--~V~vmnv~p 100 (223)
.+.|.|++|.-+-...-... .++.+.-+.++.-.|||+|||.|-.. ++-++ . .|+++--.|
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp 456 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNP 456 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCH
T ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCCh
Confidence 35788999976653322221 22112101234567999999999872 22222 2 455543222
Q ss_pred CCCCCChhhHHhhCc---ccccccccccCCC-----CCcchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEE
Q 027471 101 IESPDTLPIIYERGL---FGLYHDWCESFNT-----YPRTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLIL 170 (223)
Q Consensus 101 ~~~~~~l~~i~eRGL---i~~~~dwce~f~t-----yPrtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii 170 (223)
.+-.+++.....|+ |-+++.-.+.+.. -|.-.|+|=|-- +........++..|.-+||.|+|||.+|=
T Consensus 457 -~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSEl-mGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 457 -NAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSEL-LGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp -HHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECC-CBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred -HHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEec-cccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 11125555555666 4455643333322 155677766531 11111233455677778999999998763
No 270
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=94.73 E-value=0.27 Score=45.52 Aligned_cols=128 Identities=16% Similarity=0.228 Sum_probs=70.0
Q ss_pred ceEEEeeCCchHHHHHHhhCCCeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCC--cchhhhhhhhhhcccccc
Q 027471 71 VRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP--RTYDLLHADHLFSTIKKR 148 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP--rtyDllH~~~lfs~~~~r 148 (223)
-.+|+|+||..|||...|.+++.-|.-|-+.. .-+.+.+-+ ++.|-=+..|..-| +.||+|=|+-.
T Consensus 212 G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~---l~~~l~~~~--~V~~~~~d~~~~~~~~~~~D~vvsDm~------- 279 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP---MAQSLMDTG--QVTWLREDGFKFRPTRSNISWMVCDMV------- 279 (375)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCEEEEECSSC---CCHHHHTTT--CEEEECSCTTTCCCCSSCEEEEEECCS-------
T ss_pred CCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh---cChhhccCC--CeEEEeCccccccCCCCCcCEEEEcCC-------
Confidence 46799999999999999999976555553221 112222222 22222223555534 57999988732
Q ss_pred cchhHHHHhhhhcccCC--cEEEEec-----c-HH----HHHHHHHHHHh--CCCeeEEe--ecCCCeeEEEEEecccC
Q 027471 149 CSLKAVVAEVDRILRPD--GNLILRD-----D-AE----TIVEVEDLVKS--LHWDVRMI--YTNDNQGMLCVHKTYWR 211 (223)
Q Consensus 149 C~i~~vl~E~DRILRPg--G~~ii~D-----~-~~----~~~~i~~i~~~--l~W~~~~~--~~~~~e~~L~~~K~~w~ 211 (223)
|....++.-|.+.|..| +.+|+.= . .+ ....+.+.+.. +....... .++..|..+.++| .|.
T Consensus 280 ~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~~l~akhL~hdReEiTV~~rk-~~a 357 (375)
T 4auk_A 280 EKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRR-IWA 357 (375)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTCSSEEEEEEEE-CCC
T ss_pred CChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcchhheehhhccCCcEEEEEEEe-chh
Confidence 33446666667777766 2455551 1 11 23344444433 23333322 2444566666665 443
No 271
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=94.73 E-value=0.013 Score=53.55 Aligned_cols=108 Identities=14% Similarity=0.131 Sum_probs=60.1
Q ss_pred CCCceEEEeeCCchHHHH--HHhhCC----------------------------------------CeEEEEecCCCCCC
Q 027471 68 WSFVRNVMDMRAVYGGFA--AALKDL----------------------------------------KVWVMNVVPIESPD 105 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFA--A~L~~~----------------------------------------~V~vmnv~p~~~~~ 105 (223)
+..-..++|.+||+|+|+ |++... .|+.+.+.|..-..
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 334578999999999986 333222 26666665443222
Q ss_pred ChhhHHhhCcccccccccccCCC--CCcchhhhhhhhhhcc-cccccchhHHHHhhhhcccC--CcEE-EEeccHH
Q 027471 106 TLPIIYERGLFGLYHDWCESFNT--YPRTYDLLHADHLFST-IKKRCSLKAVVAEVDRILRP--DGNL-ILRDDAE 175 (223)
Q Consensus 106 ~l~~i~eRGLi~~~~dwce~f~t--yPrtyDllH~~~lfs~-~~~rC~i~~vl~E~DRILRP--gG~~-ii~D~~~ 175 (223)
..+-+...|+-..++=-+..+.. .+.+||+|-|+-=|.. ..+.-.+..+..++-++||+ ||.+ +++.+.+
T Consensus 272 Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~ 347 (384)
T 3ldg_A 272 ARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDTD 347 (384)
T ss_dssp HHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCTT
T ss_pred HHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCHH
Confidence 33334455764322211223333 2368999888644431 12223456777788888887 6655 4555444
No 272
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.70 E-value=0.042 Score=50.37 Aligned_cols=134 Identities=15% Similarity=0.210 Sum_probs=70.6
Q ss_pred hhhccCCCCCCceEEEeeCC------chHHHHHH-hhCCC-e-EEEEecCCCCCCChhhHHhhCcccccccccccCCCCC
Q 027471 60 YLNGMGINWSFVRNVMDMRA------VYGGFAAA-LKDLK-V-WVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYP 130 (223)
Q Consensus 60 Y~~~l~i~~~~iRnvLDmga------G~GgFAA~-L~~~~-V-~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyP 130 (223)
|++.-.+.--.--+|||+|| --|++..+ +...+ + ....+.|...... .. +..| |..+.+ .
T Consensus 99 yl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~sda~--------~~-IqGD-~~~~~~-~ 167 (344)
T 3r24_A 99 YLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDAD--------ST-LIGD-CATVHT-A 167 (344)
T ss_dssp HHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBCSSS--------EE-EESC-GGGEEE-S
T ss_pred HhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccccCCC--------eE-EEcc-cccccc-C
Confidence 66543343344578999997 67887655 44443 3 3356767654211 11 2233 433222 2
Q ss_pred cchhhhhhhhhhccccc----c---cchhHHHHhh-hhcccCCcEEEEe----ccHHHHHHHHHHHHhCCCeeEEee---
Q 027471 131 RTYDLLHADHLFSTIKK----R---CSLKAVVAEV-DRILRPDGNLILR----DDAETIVEVEDLVKSLHWDVRMIY--- 195 (223)
Q Consensus 131 rtyDllH~~~lfs~~~~----r---C~i~~vl~E~-DRILRPgG~~ii~----D~~~~~~~i~~i~~~l~W~~~~~~--- 195 (223)
+-||+|=|+-.=....+ + -.+-...+|+ .++|+|||.|++- ...+. +.++.+.+.+-.....
T Consensus 168 ~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~---L~~lrk~F~~VK~fK~ASR 244 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNAD---LYKLMGHFSWWTAFVTNVN 244 (344)
T ss_dssp SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHH---HHHHHTTEEEEEEEEEGGG
T ss_pred CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHH---HHHHHhhCCeEEEECCCCC
Confidence 66888666422221111 1 0122444554 4589999999986 22233 4444444433332222
Q ss_pred cCCCeeEEEEEe
Q 027471 196 TNDNQGMLCVHK 207 (223)
Q Consensus 196 ~~~~e~~L~~~K 207 (223)
.+++|.+|++..
T Consensus 245 a~SsEvYLVG~g 256 (344)
T 3r24_A 245 ASSSEAFLIGAN 256 (344)
T ss_dssp TTSSCEEEEEEE
T ss_pred CCCeeEEEEeee
Confidence 356899999976
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=94.32 E-value=0.0017 Score=56.14 Aligned_cols=74 Identities=16% Similarity=0.083 Sum_probs=41.4
Q ss_pred ceEEEeeCCchHHHHHHhhCC--CeEEEEecC-------CCCCCChhhHHhhCc---cccccccccc-CCCCC---cchh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL--KVWVMNVVP-------IESPDTLPIIYERGL---FGLYHDWCES-FNTYP---RTYD 134 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p-------~~~~~~l~~i~eRGL---i~~~~dwce~-f~tyP---rtyD 134 (223)
-.+|||+|||+|.++..|+.+ .|+.+.+.| ..-....+-+...|+ +-+++.-.+. ++.++ .+||
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD 163 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPD 163 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCS
T ss_pred cCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCcc
Confidence 357999999999999998876 466677666 211111111112233 2233321112 22344 6899
Q ss_pred hhhhhhhhcc
Q 027471 135 LLHADHLFST 144 (223)
Q Consensus 135 llH~~~lfs~ 144 (223)
+|-++-.|.+
T Consensus 164 ~V~~dP~~~~ 173 (258)
T 2r6z_A 164 IVYLDPMYPE 173 (258)
T ss_dssp EEEECCCC--
T ss_pred EEEECCCCCC
Confidence 9988766654
No 274
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=93.97 E-value=0.038 Score=48.26 Aligned_cols=36 Identities=14% Similarity=0.045 Sum_probs=27.5
Q ss_pred ccCCCCCCceEEEeeCCchHHHHHHhhCC--CeEEEEecCC
Q 027471 63 GMGINWSFVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPI 101 (223)
Q Consensus 63 ~l~i~~~~iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~ 101 (223)
.+++..+ +|||+|||+|.++..|+++ .|+++.+.+.
T Consensus 42 ~~~~~~~---~VLEIG~G~G~lt~~L~~~~~~V~avEid~~ 79 (271)
T 3fut_A 42 AARPFTG---PVFEVGPGLGALTRALLEAGAEVTAIEKDLR 79 (271)
T ss_dssp HHCCCCS---CEEEECCTTSHHHHHHHHTTCCEEEEESCGG
T ss_pred hcCCCCC---eEEEEeCchHHHHHHHHHcCCEEEEEECCHH
Confidence 3455444 8999999999999999887 4677766544
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=93.96 E-value=0.0084 Score=57.09 Aligned_cols=132 Identities=13% Similarity=0.158 Sum_probs=71.0
Q ss_pred ceEEEeeCCchHHHHHHhhCC----------------------CeEEEEecCCCCCCChhhH----HhhCccc-------
Q 027471 71 VRNVMDMRAVYGGFAAALKDL----------------------KVWVMNVVPIESPDTLPII----YERGLFG------- 117 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~----------------------~V~vmnv~p~~~~~~l~~i----~eRGLi~------- 117 (223)
-.+|+|.+||+|+|..++.++ .+..+-+.|. +..++ .-+|+..
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~----~~~lA~~nl~l~gi~~~~~~~~~ 245 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPG----TRRLALMNCLLHDIEGNLDHGGA 245 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHH----HHHHHHHHHHTTTCCCBGGGTBS
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHH----HHHHHHHHHHHhCCCccccccCC
Confidence 457999999999997665431 3555444332 22222 2245432
Q ss_pred ccccccccCCC--CC-cchhhhhhhhhhcccccc----------cch-hHHHHhhhhcccCCcEEEEeccHHHH------
Q 027471 118 LYHDWCESFNT--YP-RTYDLLHADHLFSTIKKR----------CSL-KAVVAEVDRILRPDGNLILRDDAETI------ 177 (223)
Q Consensus 118 ~~~dwce~f~t--yP-rtyDllH~~~lfs~~~~r----------C~i-~~vl~E~DRILRPgG~~ii~D~~~~~------ 177 (223)
+++ +.+|.. .+ ..||+|=+.--|+..... -.. ..++..+-|.|+|||.+.+--+...+
T Consensus 246 I~~--gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~ 323 (541)
T 2ar0_A 246 IRL--GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKG 323 (541)
T ss_dssp EEE--SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHH
T ss_pred eEe--CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHH
Confidence 222 234443 22 679998876666543210 111 15678889999999998776444432
Q ss_pred HHHHH-HHHhCCCeeEEee-------cCCCeeEEEEEec
Q 027471 178 VEVED-LVKSLHWDVRMIY-------TNDNQGMLCVHKT 208 (223)
Q Consensus 178 ~~i~~-i~~~l~W~~~~~~-------~~~~e~~L~~~K~ 208 (223)
.++.+ |++.-.....+.. +.-..-+|+.+|.
T Consensus 324 ~~iR~~L~~~~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~ 362 (541)
T 2ar0_A 324 TDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKG 362 (541)
T ss_dssp HHHHHHHHHHEEEEEEEECCSSCSSSCSCCEEEEEEEEB
T ss_pred HHHHHHHhhcCCEEEEEEcCcCcccCCCCcEEEEEEECC
Confidence 34543 4554333332221 1224566777663
No 276
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=93.96 E-value=0.019 Score=50.92 Aligned_cols=70 Identities=11% Similarity=0.095 Sum_probs=41.8
Q ss_pred cCCCCCCceEEEeeCCchHHHHHHhhCC--CeEEEEecCCCCCCChhhHHhh----CcccccccccccCCC--CC-cchh
Q 027471 64 MGINWSFVRNVMDMRAVYGGFAAALKDL--KVWVMNVVPIESPDTLPIIYER----GLFGLYHDWCESFNT--YP-RTYD 134 (223)
Q Consensus 64 l~i~~~~iRnvLDmgaG~GgFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eR----GLi~~~~dwce~f~t--yP-rtyD 134 (223)
+++.. -.+|||+|||.|.+++.|+++ .|+++.+.+. .++.+.++ +=+-+++ +.+.. ++ .+||
T Consensus 46 l~~~~--~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~----li~~a~~~~~~~~~v~vi~---gD~l~~~~~~~~fD 116 (295)
T 3gru_A 46 ANLTK--DDVVLEIGLGKGILTEELAKNAKKVYVIEIDKS----LEPYANKLKELYNNIEIIW---GDALKVDLNKLDFN 116 (295)
T ss_dssp TTCCT--TCEEEEECCTTSHHHHHHHHHSSEEEEEESCGG----GHHHHHHHHHHCSSEEEEE---SCTTTSCGGGSCCS
T ss_pred cCCCC--cCEEEEECCCchHHHHHHHhcCCEEEEEECCHH----HHHHHHHHhccCCCeEEEE---CchhhCCcccCCcc
Confidence 44443 358999999999999999876 4666666554 33333322 2122333 23333 34 4699
Q ss_pred hhhhhhhh
Q 027471 135 LLHADHLF 142 (223)
Q Consensus 135 llH~~~lf 142 (223)
.|-+..-|
T Consensus 117 ~Iv~NlPy 124 (295)
T 3gru_A 117 KVVANLPY 124 (295)
T ss_dssp EEEEECCG
T ss_pred EEEEeCcc
Confidence 87766333
No 277
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=93.54 E-value=0.033 Score=48.26 Aligned_cols=86 Identities=19% Similarity=0.206 Sum_probs=47.3
Q ss_pred cccccccCCCCCc----chhhhhhhhhhcccccccc-hhHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhCCCeeEE
Q 027471 119 YHDWCESFNTYPR----TYDLLHADHLFSTIKKRCS-LKAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSLHWDVRM 193 (223)
Q Consensus 119 ~~dwce~f~tyPr----tyDllH~~~lfs~~~~rC~-i~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l~W~~~~ 193 (223)
..|..+.++..+. .||++-.+ .|+.-++-.. -+.+|.+|-|.|||||.++.-.... .+.+-+..-..++..
T Consensus 156 ~GDa~~~l~~~~~~~~~~~D~iflD-~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa~---~vrr~L~~aGF~v~~ 231 (257)
T 2qy6_A 156 FGDINELISQLDDSLNQKVDAWFLD-GFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAG---FVRRGLQEAGFTMQK 231 (257)
T ss_dssp ESCHHHHGGGSCGGGTTCEEEEEEC-SSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCBH---HHHHHHHHHTEEEEE
T ss_pred ECcHHHHHhhcccccCCeEEEEEEC-CCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCCH---HHHHHHHHCCCEEEe
Confidence 3444444555553 68988775 3543222110 2479999999999999998521111 233333333444432
Q ss_pred ee-cCCCeeEEEEEec
Q 027471 194 IY-TNDNQGMLCVHKT 208 (223)
Q Consensus 194 ~~-~~~~e~~L~~~K~ 208 (223)
.. -..+...+.+.|.
T Consensus 232 ~~g~~~kr~m~~a~~~ 247 (257)
T 2qy6_A 232 RKGFGRKREMLCGVME 247 (257)
T ss_dssp ECCSTTCCCEEEEEEC
T ss_pred CCCCCCCCceEEEEec
Confidence 21 1235567787774
No 278
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=93.34 E-value=0.053 Score=46.34 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=27.5
Q ss_pred ceEEEeeCCchHHHHHHhhCCC---eEEEEecCCCCCCChhhHHhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK---VWVMNVVPIESPDTLPIIYER 113 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~---V~vmnv~p~~~~~~l~~i~eR 113 (223)
-.+|||+|||+|.++.+|.+++ |+++.+.+. .++.+.++
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~----~~~~~~~~ 73 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDRE----MVENLKSI 73 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHH----HHHHHTTS
T ss_pred cCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHH----HHHHHHhc
Confidence 4579999999999999999884 555544332 44444444
No 279
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=93.17 E-value=0.085 Score=47.05 Aligned_cols=128 Identities=13% Similarity=0.078 Sum_probs=64.5
Q ss_pred ceEEEeeCCchHHHHHHhhCC-CeE---EEEecCCCCC-CChhhH-HhhCccccc-c-cccccCCCCCcchhhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL-KVW---VMNVVPIESP-DTLPII-YERGLFGLY-H-DWCESFNTYPRTYDLLHADHLF 142 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~-~V~---vmnv~p~~~~-~~l~~i-~eRGLi~~~-~-dwce~f~tyPrtyDllH~~~lf 142 (223)
-.+|+|+||+-|||.-+.+++ +|- -. ++-.+.| .....+ +--.++-+. . |.. ..-++-+|+|=|+-.=
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~~vg~V~G~-vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~---~~~~~~~DvVLSDMAP 149 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMKNVQEVRGY-TKGGPGHEEPMLMQSYGWNIVTMKSGVDVF---YKPSEISDTLLCDIGE 149 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTSTTEEEEEEE-CCCSTTSCCCCCCCSTTGGGEEEECSCCGG---GSCCCCCSEEEECCCC
T ss_pred CCEEEEcCCCCCHHHHHHhhhcCCCCceeE-EEccccccCCCcccCCCceEEEeeccCCcc---CCCCCCCCEEEeCCCC
Confidence 468999999999999999887 342 11 1222211 000000 000112111 1 321 1224678888776433
Q ss_pred cccccc-----cchhHHHHhhh-hcccCCc-EEEEe----ccHHHH---HHHHHHHHhCCCeeEEe--ecCCCeeEEEEE
Q 027471 143 STIKKR-----CSLKAVVAEVD-RILRPDG-NLILR----DDAETI---VEVEDLVKSLHWDVRMI--YTNDNQGMLCVH 206 (223)
Q Consensus 143 s~~~~r-----C~i~~vl~E~D-RILRPgG-~~ii~----D~~~~~---~~i~~i~~~l~W~~~~~--~~~~~e~~L~~~ 206 (223)
+ ..++ ..+ . .+|+- ++|+||| .|++- +..+.. .++++.++... +... -.+..|.+++|.
T Consensus 150 n-SG~~~vD~~Rs~-~-aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~~vk--vk~paSR~~S~E~YlVa~ 224 (269)
T 2px2_A 150 S-SPSAEIEEQRTL-R-ILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFGGGL--VRVPLSRNSNHEMYWVSG 224 (269)
T ss_dssp C-CSCHHHHHHHHH-H-HHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEE--ECCTTSCTTCCCEEEETT
T ss_pred C-CCccHHHHHHHH-H-HHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHHcCCEE--EECCCCCCCCccEEEEec
Confidence 3 2111 112 2 34544 8999999 88774 224443 35555555543 1111 124579998875
Q ss_pred e
Q 027471 207 K 207 (223)
Q Consensus 207 K 207 (223)
-
T Consensus 225 ~ 225 (269)
T 2px2_A 225 A 225 (269)
T ss_dssp C
T ss_pred c
Confidence 3
No 280
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=92.82 E-value=0.21 Score=44.65 Aligned_cols=138 Identities=17% Similarity=0.232 Sum_probs=75.6
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC-CeEEEEecCCCCCCChhhHH------hhCc-----cc-ccccccccCCCCCcchh
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL-KVWVMNVVPIESPDTLPIIY------ERGL-----FG-LYHDWCESFNTYPRTYD 134 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~-~V~vmnv~p~~~~~~l~~i~------eRGL-----i~-~~~dwce~f~tyPrtyD 134 (223)
...-++||=+|.|-|+.++.+.+. +|--+.++..+.. -++++. ..|. +- .+.|-.+-+...+++||
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~-Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAG-VVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHH-HHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHH-HHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCC
Confidence 456789999999999999999886 4443444444431 111111 1111 11 33333333334668999
Q ss_pred hhhhhhhhccccc--ccchhHHHHhhhhcccCCcEEEEe------ccHHHHHHHHHHHHhCCCeeEEe------ecCCCe
Q 027471 135 LLHADHLFSTIKK--RCSLKAVVAEVDRILRPDGNLILR------DDAETIVEVEDLVKSLHWDVRMI------YTNDNQ 200 (223)
Q Consensus 135 llH~~~lfs~~~~--rC~i~~vl~E~DRILRPgG~~ii~------D~~~~~~~i~~i~~~l~W~~~~~------~~~~~e 200 (223)
+|=.+ ++..... .---..++..+.|+|+|||.++.. +.......++.+-+.+. .+... +..+.-
T Consensus 160 vIi~D-~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~-~v~~~~~~vPty~~g~w 237 (294)
T 3o4f_A 160 VIISD-CTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIM 237 (294)
T ss_dssp EEEES-CCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCS-EEEEEEECCTTSSSSCE
T ss_pred EEEEe-CCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCC-ceeeeeeeeccCCCcce
Confidence 98765 3332111 111126788899999999999986 22223333333322222 22221 123456
Q ss_pred eEEEEEec
Q 027471 201 GMLCVHKT 208 (223)
Q Consensus 201 ~~L~~~K~ 208 (223)
.+.+|.|+
T Consensus 238 ~f~~as~~ 245 (294)
T 3o4f_A 238 TFAWATDN 245 (294)
T ss_dssp EEEEEESC
T ss_pred eheeEECC
Confidence 78888876
No 281
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=92.73 E-value=0.021 Score=53.21 Aligned_cols=132 Identities=10% Similarity=-0.032 Sum_probs=66.1
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhh---Cc--cccccc-ccccCCCCC-cchhhhhhhhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYER---GL--FGLYHD-WCESFNTYP-RTYDLLHADHL 141 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eR---GL--i~~~~d-wce~f~tyP-rtyDllH~~~l 141 (223)
-.+|||+|||+|.++.+|...+ |+.+.+.|.... ..+.+.++ |+ +-+++. ..+.++.++ ..||+|.++--
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~-~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAV-AARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPA 172 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHH-HHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCE
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHH-HHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCC
Confidence 3789999999999999998885 555555443221 12222222 66 333332 111112222 58999888633
Q ss_pred hcccc-------cccchhHHHHhhhhcc-cCCcEEEEeccHHHHHHHHHHHHhCCCeeEEee----cCCCeeEEEEEe
Q 027471 142 FSTIK-------KRCSLKAVVAEVDRIL-RPDGNLILRDDAETIVEVEDLVKSLHWDVRMIY----TNDNQGMLCVHK 207 (223)
Q Consensus 142 fs~~~-------~rC~i~~vl~E~DRIL-RPgG~~ii~D~~~~~~~i~~i~~~l~W~~~~~~----~~~~e~~L~~~K 207 (223)
+.... ..| .--+.++-+.| +-+..+++.-.+.. .++..++.+.|...++- .+=+|-+|...+
T Consensus 173 rr~~~~grv~~led~--~P~l~~~~~~l~~~~~~~~vK~sP~l--d~~~~~~~l~~~~ev~~vSv~ge~kE~~l~~~~ 246 (410)
T 3ll7_A 173 RRSGADKRVYAIADC--EPDLIPLATELLPFCSSILAKLSPMI--DLWDTLQSLLHVQELHVVAAHGEVKELLVRMSL 246 (410)
T ss_dssp EC-----CCCCGGGE--ESCHHHHHHHHGGGSSEEEEEECTTS--CHHHHHHHCSSEEEEEEEEETTEEEEEEEEECT
T ss_pred CcCCCCceEEehhhc--CCCHHHHHHHHHhhCCcEEEEcCCCC--ChHHHHhhCCCCcEEEEEEeCCeEEEEEEEecC
Confidence 33211 112 12344555544 44556666533222 22344456667654331 122566665543
No 282
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=92.65 E-value=0.052 Score=46.78 Aligned_cols=31 Identities=6% Similarity=0.051 Sum_probs=24.6
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecCC
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVPI 101 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~ 101 (223)
-.+|||+|||+|.++..|++++ |+++.+.+.
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~ 62 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTECDNLALVEIDRD 62 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTSSEEEEEECCHH
T ss_pred cCEEEEEcccccHHHHHHHHhCCEEEEEECCHH
Confidence 4589999999999999999884 566655443
No 283
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=92.31 E-value=0.062 Score=46.97 Aligned_cols=39 Identities=5% Similarity=0.100 Sum_probs=29.4
Q ss_pred ceEEEeeCCchHHHHHHhhCC--C----eEEEEecCCCCCCChhhHHhh
Q 027471 71 VRNVMDMRAVYGGFAAALKDL--K----VWVMNVVPIESPDTLPIIYER 113 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~--~----V~vmnv~p~~~~~~l~~i~eR 113 (223)
-.+|||+|||+|.++..|+++ . |+++.+.+. .++.+.++
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~----~l~~a~~~ 87 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRD----LIGRLEQR 87 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHH----HHHHHHHH
T ss_pred cCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHH----HHHHHHHh
Confidence 458999999999999999875 4 888877554 44555444
No 284
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=91.93 E-value=0.022 Score=49.63 Aligned_cols=101 Identities=23% Similarity=0.307 Sum_probs=53.2
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCCC--eEEEEecCCCCC---CChhhHHh----hC-c---cccccccccc-CC
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVPIESP---DTLPIIYE----RG-L---FGLYHDWCES-FN 127 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~---~~l~~i~e----RG-L---i~~~~dwce~-f~ 127 (223)
+.+++..+.-.+|||++||.|.++-.|+.++ |+.+-..|.... +.++.+.+ .| + +-+++.-.+. ++
T Consensus 80 ~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~ 159 (258)
T 2oyr_A 80 KAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALT 159 (258)
T ss_dssp HHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHST
T ss_pred HHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHH
Confidence 3445555544689999999999998887664 555555442100 01111110 11 2 2233322222 34
Q ss_pred CCCcchhhhhhhhhhcccccccchhHHHHhhhhcccCCc
Q 027471 128 TYPRTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDG 166 (223)
Q Consensus 128 tyPrtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG 166 (223)
.++..||+|-++-.|..-.+. ..+.+.=|+||+.+
T Consensus 160 ~~~~~fDvV~lDP~y~~~~~s----aavkk~~~~lr~l~ 194 (258)
T 2oyr_A 160 DITPRPQVVYLDPMFPHKQKS----ALVKKEMRVFQSLV 194 (258)
T ss_dssp TCSSCCSEEEECCCCCCCCC---------HHHHHHHHHS
T ss_pred hCcccCCEEEEcCCCCCcccc----hHHHHHHHHHHHhh
Confidence 456679999888777543221 23344446777766
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=90.53 E-value=0.2 Score=51.00 Aligned_cols=56 Identities=7% Similarity=0.119 Sum_probs=33.1
Q ss_pred HHHHhhhhcccCCcEEEEeccHHHH-------HHHHHH-HHhCCCeeEEeecC--------CCeeEEEEEec
Q 027471 153 AVVAEVDRILRPDGNLILRDDAETI-------VEVEDL-VKSLHWDVRMIYTN--------DNQGMLCVHKT 208 (223)
Q Consensus 153 ~vl~E~DRILRPgG~~ii~D~~~~~-------~~i~~i-~~~l~W~~~~~~~~--------~~e~~L~~~K~ 208 (223)
.++..+-+.|+|||.+.+--+...+ ..+.+. ++.......+.... ..--+|+.+|.
T Consensus 446 aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LLe~~~I~aIIdLP~~~~F~~asv~T~ILIlrK~ 517 (878)
T 3s1s_A 446 LFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGLEHIFLYPREGLFEEVIKDTVVFVGRKG 517 (878)
T ss_dssp HHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHHTTTTCEEEEEECCBCCSSCSCBCCEEEEEEETT
T ss_pred HHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHHHHHHhCCCeEEEEECCCccccCCCCCcEEEEEEEcC
Confidence 5677789999999998776444433 345543 55544444332111 23457777775
No 286
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=90.29 E-value=0.18 Score=41.57 Aligned_cols=51 Identities=12% Similarity=0.161 Sum_probs=33.7
Q ss_pred HhhhhHHHHHhhhhhhccCCCCCCceEEEeeCCchH-HHHHHhhC-CC--eEEEEecCCC
Q 027471 47 ADYQHWKNVVSKSYLNGMGINWSFVRNVMDMRAVYG-GFAAALKD-LK--VWVMNVVPIE 102 (223)
Q Consensus 47 ~D~~~W~~~v~~~Y~~~l~i~~~~iRnvLDmgaG~G-gFAA~L~~-~~--V~vmnv~p~~ 102 (223)
+.++.|..-+. |+..- ... -..|+++|||.| --|.+|++ .+ |.+..+.|..
T Consensus 17 ~~~~m~e~Lae--YI~~~-~~~--~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~A 71 (153)
T 2k4m_A 17 RGSHMWNDLAV--YIIRC-SGP--GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSH 71 (153)
T ss_dssp CCCHHHHHHHH--HHHHH-SCS--SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSS
T ss_pred chhhHHHHHHH--HHHhc-CCC--CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccc
Confidence 44455777664 66422 111 248999999999 59999986 65 5666676653
No 287
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=89.82 E-value=0.13 Score=45.51 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=25.7
Q ss_pred ccCCCCCCceEEEeeCCchHHHHHHhhCC----CeEEEEecC
Q 027471 63 GMGINWSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVP 100 (223)
Q Consensus 63 ~l~i~~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p 100 (223)
.|++..+ ..|||+|||+|+++.+|+++ .|+.+...|
T Consensus 21 ~L~~~~g--~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~ 60 (301)
T 1m6y_A 21 FLKPEDE--KIILDCTVGEGGHSRAILEHCPGCRIIGIDVDS 60 (301)
T ss_dssp HHCCCTT--CEEEETTCTTSHHHHHHHHHCTTCEEEEEESCH
T ss_pred hcCCCCC--CEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCH
Confidence 3444443 48999999999999999875 356565544
No 288
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=87.59 E-value=0.12 Score=47.18 Aligned_cols=102 Identities=21% Similarity=0.182 Sum_probs=53.5
Q ss_pred CCCceEEEeeCCchHHHHHHhhCC----CeEEEEecCCCCCCChhhHHhh-Ccc--------c-ccccccccCCC-CCcc
Q 027471 68 WSFVRNVMDMRAVYGGFAAALKDL----KVWVMNVVPIESPDTLPIIYER-GLF--------G-LYHDWCESFNT-YPRT 132 (223)
Q Consensus 68 ~~~iRnvLDmgaG~GgFAA~L~~~----~V~vmnv~p~~~~~~l~~i~eR-GLi--------~-~~~dwce~f~t-yPrt 132 (223)
...--.||||-||-||-+.+|++. .|++..+.+.-. ..+.-+++| |+- - +.+| ...++. ++.+
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~-~~l~~~l~r~~~~~~~~~~~v~v~~~D-~~~~~~~~~~~ 223 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRI-ARLQKILHSYVPEEIRDGNQVRVTSWD-GRKWGELEGDT 223 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHH-HHHHHHHHHHSCTTTTTSSSEEEECCC-GGGHHHHSTTC
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHH-HHHHHHHHHhhhhhhccCCceEEEeCc-hhhcchhcccc
Confidence 333457999999999988887665 244433322110 133334443 221 1 1111 111222 3478
Q ss_pred hhhhh----hhh----hhcc-------ccc--ccc---hh-HHHHhhhhcccCCcEEEEe
Q 027471 133 YDLLH----ADH----LFST-------IKK--RCS---LK-AVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 133 yDllH----~~~----lfs~-------~~~--rC~---i~-~vl~E~DRILRPgG~~ii~ 171 (223)
||.|= |++ ++.. +.. .-. ++ .+|...-+.|||||.+|.+
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYs 283 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYS 283 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 88854 332 2211 110 000 11 6777888999999999998
No 289
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=87.36 E-value=0.28 Score=42.00 Aligned_cols=29 Identities=3% Similarity=0.006 Sum_probs=21.7
Q ss_pred eEEEeeCCchHHHHHHhhC-CC--eEEEEecCC
Q 027471 72 RNVMDMRAVYGGFAAALKD-LK--VWVMNVVPI 101 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~-~~--V~vmnv~p~ 101 (223)
.+|||+|||+|.+++ |.. .. |+++.+.|.
T Consensus 23 ~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~ 54 (252)
T 1qyr_A 23 QAMVEIGPGLAALTE-PVGERLDQLTVIELDRD 54 (252)
T ss_dssp CCEEEECCTTTTTHH-HHHTTCSCEEEECCCHH
T ss_pred CEEEEECCCCcHHHH-hhhCCCCeEEEEECCHH
Confidence 479999999999999 753 24 777666443
No 290
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=86.52 E-value=0.24 Score=48.64 Aligned_cols=41 Identities=20% Similarity=0.278 Sum_probs=23.8
Q ss_pred chhhhhhhhhhcc-cccccchhHHHHhhhhccc---CCcEEEEec
Q 027471 132 TYDLLHADHLFST-IKKRCSLKAVVAEVDRILR---PDGNLILRD 172 (223)
Q Consensus 132 tyDllH~~~lfs~-~~~rC~i~~vl~E~DRILR---PgG~~ii~D 172 (223)
.||+|-|.-=|.. ..+.-.+..+..++-++|| |||.+++-.
T Consensus 303 ~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 303 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFS 347 (703)
T ss_dssp CCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 8999888644431 1222344555555665555 899886643
No 291
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=86.49 E-value=2.6 Score=37.43 Aligned_cols=112 Identities=18% Similarity=0.082 Sum_probs=55.6
Q ss_pred CCCCCceEEEeeCCchHHHHHHhhCC-C---eEEEEecCCCCCCChhhHHhhCccc-ccccccccCCCCCcchhhhhhhh
Q 027471 66 INWSFVRNVMDMRAVYGGFAAALKDL-K---VWVMNVVPIESPDTLPIIYERGLFG-LYHDWCESFNTYPRTYDLLHADH 140 (223)
Q Consensus 66 i~~~~iRnvLDmgaG~GgFAA~L~~~-~---V~vmnv~p~~~~~~l~~i~eRGLi~-~~~dwce~f~tyPrtyDllH~~~ 140 (223)
++.+. +|+|+||+.|||.-+.+.+ + |..+.+-+.+... =..+..-|-.. .+.+=+.-|.--|+.+|.|=|+-
T Consensus 76 l~~g~--~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~~~~~DtllcDI 152 (267)
T 3p8z_A 76 VIPEG--RVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLPPEKCDTLLCDI 152 (267)
T ss_dssp SCCCE--EEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCCCCCCSEEEECC
T ss_pred CCCCC--EEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecCCccccEEEEec
Confidence 45544 9999999999999966555 4 4445554433221 01111223222 12211111222335588877763
Q ss_pred hhcccccccchh-----HHHHhhhhcccCCcEEEEe----ccHHHHHHHHHH
Q 027471 141 LFSTIKKRCSLK-----AVVAEVDRILRPDGNLILR----DDAETIVEVEDL 183 (223)
Q Consensus 141 lfs~~~~rC~i~-----~vl~E~DRILRPgG~~ii~----D~~~~~~~i~~i 183 (223)
-=|.-. ..++ .+|.=+-+.|.+ |.|.+- -..+++++++.+
T Consensus 153 geSs~~--~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~~l 201 (267)
T 3p8z_A 153 GESSPS--PTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERL 201 (267)
T ss_dssp CCCCSC--HHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHH
T ss_pred CCCCCC--hhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHHHH
Confidence 322111 1111 233333778888 777775 333444555544
No 292
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=86.41 E-value=0.51 Score=40.73 Aligned_cols=21 Identities=43% Similarity=0.613 Sum_probs=18.1
Q ss_pred hhHHHHhhhhcccCCcEEEEe
Q 027471 151 LKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 151 i~~vl~E~DRILRPgG~~ii~ 171 (223)
+..++.|+-|+|+|||.+++-
T Consensus 76 l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 76 LDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEE
Confidence 457889999999999999775
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=85.86 E-value=3.1 Score=37.86 Aligned_cols=112 Identities=16% Similarity=0.147 Sum_probs=55.2
Q ss_pred CCCCCceEEEeeCCchHHHHHHhhCC-Ce---EEEEecCCCC--CCChhhHHhhCcccccccccccCCCCCcchhhhhhh
Q 027471 66 INWSFVRNVMDMRAVYGGFAAALKDL-KV---WVMNVVPIES--PDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHAD 139 (223)
Q Consensus 66 i~~~~iRnvLDmgaG~GgFAA~L~~~-~V---~vmnv~p~~~--~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~ 139 (223)
|+.+. +|+|+||+.|||.-+.+.+ +| ..+.+-..+. |...| -+.--|+ ...+=+..+---|..+|+|=|+
T Consensus 92 l~~~~--~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~-ql~w~lV-~~~~~~Dv~~l~~~~~D~ivcD 167 (321)
T 3lkz_A 92 LEPVG--KVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQ-SYGWNIV-TMKSGVDVFYRPSECCDTLLCD 167 (321)
T ss_dssp CCCCE--EEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCC-BTTGGGE-EEECSCCTTSSCCCCCSEEEEC
T ss_pred CCCCC--EEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhh-hcCCcce-EEEeccCHhhCCCCCCCEEEEE
Confidence 44444 9999999999999966554 54 4445533321 21111 1111112 1111001111223558888876
Q ss_pred hhhcccccccchh-----HHHHhhhhcccCC-cEEEEe--cc--HHHHHHHHHH
Q 027471 140 HLFSTIKKRCSLK-----AVVAEVDRILRPD-GNLILR--DD--AETIVEVEDL 183 (223)
Q Consensus 140 ~lfs~~~~rC~i~-----~vl~E~DRILRPg-G~~ii~--D~--~~~~~~i~~i 183 (223)
--=|.- ...++ .+|.=+-+.|++| |.|.+- -+ .+++++++.+
T Consensus 168 igeSs~--~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~l 219 (321)
T 3lkz_A 168 IGESSS--SAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELL 219 (321)
T ss_dssp CCCCCS--CHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHH
T ss_pred CccCCC--ChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHH
Confidence 332111 11111 2333336778899 888885 22 4445555554
No 294
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=84.18 E-value=0.26 Score=47.04 Aligned_cols=16 Identities=31% Similarity=0.341 Sum_probs=14.2
Q ss_pred EEEeeCCchHHHHHHh
Q 027471 73 NVMDMRAVYGGFAAAL 88 (223)
Q Consensus 73 nvLDmgaG~GgFAA~L 88 (223)
.|+|.+||+|+|..++
T Consensus 247 ~VlDPaCGSG~fLi~a 262 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSS 262 (544)
T ss_dssp EEEESSCTTCHHHHHH
T ss_pred eEeCcccCcCcHHHHH
Confidence 8999999999997665
No 295
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.99 E-value=1.1 Score=40.32 Aligned_cols=97 Identities=14% Similarity=0.184 Sum_probs=62.9
Q ss_pred eEEEeeCCchHHHHHHhhCCCeEEEEecCCCCCCChhhHHhh-CcccccccccccCCCCCcchhhhhhhhhhcccccccc
Q 027471 72 RNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYER-GLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKKRCS 150 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~V~vmnv~p~~~~~~l~~i~eR-GLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~~rC~ 150 (223)
.+||.+|.++|..+-+|...+++.|+=+ .-++..++.++++ |+.+.-..+..+..+.|..||++--. .-+..-.
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~~~~~~ds-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----lpk~~~~ 114 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHKPYSIGDS-YISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIK----VPKTLAL 114 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGCCEEEESC-HHHHHHHHHHHHHTTCCGGGSEEEETTSCCCSSCSEEEEE----CCSCHHH
T ss_pred CCEEEECCCCCHHHHhhccCCceEEEhH-HHHHHHHHHHHHHcCCCccceEecccccccccCCCEEEEE----cCCCHHH
Confidence 4699999999999999988888877421 1122233334433 55443222444666778889975432 1123344
Q ss_pred hhHHHHhhhhcccCCcEEEEecc
Q 027471 151 LKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 151 i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
+...|.++-..|+||+.+++-..
T Consensus 115 l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 115 LEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp HHHHHHHHHTTCCTTSEEEEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEEec
Confidence 56788888889999999988644
No 296
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=83.50 E-value=0.93 Score=39.85 Aligned_cols=43 Identities=14% Similarity=0.280 Sum_probs=29.1
Q ss_pred cchhHHHHhhhhcccCCcEEEEe-ccH----------HHHHHHHHHHHhCCCee
Q 027471 149 CSLKAVVAEVDRILRPDGNLILR-DDA----------ETIVEVEDLVKSLHWDV 191 (223)
Q Consensus 149 C~i~~vl~E~DRILRPgG~~ii~-D~~----------~~~~~i~~i~~~l~W~~ 191 (223)
+.+..+|.|+.|+|+|||.+++. ++. ..+..+..+++...|..
T Consensus 61 ~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~~~~~i~~~~~~~Gf~~ 114 (323)
T 1boo_A 61 DWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFL 114 (323)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEECCHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcccccchHHHHHHHHHhCCCEE
Confidence 34678999999999999999885 221 12444545556665554
No 297
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=81.26 E-value=0.44 Score=45.53 Aligned_cols=117 Identities=10% Similarity=0.030 Sum_probs=61.9
Q ss_pred CceEEEeeCCchHHHHHHhhCC-------CeEEEEecCCCCCCChhhH----HhhCcc----cccccccccCCC----CC
Q 027471 70 FVRNVMDMRAVYGGFAAALKDL-------KVWVMNVVPIESPDTLPII----YERGLF----GLYHDWCESFNT----YP 130 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~-------~V~vmnv~p~~~~~~l~~i----~eRGLi----~~~~dwce~f~t----yP 130 (223)
...+|+|-+||+|+|..++.++ .+...-+.|. +..++ .-+|+- .+.+ +..|.. ++
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~----~~~lA~~Nl~l~gi~~~~~~I~~--gDtL~~d~p~~~ 294 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTS----TYNLARMNMILHGVPIENQFLHN--ADTLDEDWPTQE 294 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHH----HHHHHHHHHHHTTCCGGGEEEEE--SCTTTSCSCCSS
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHH----HHHHHHHHHHHcCCCcCccceEe--cceecccccccc
Confidence 4568999999999997666432 2333333222 22222 235652 1222 234433 33
Q ss_pred -cchhhhhhhhhhcccc-------------------cccchh-HHHHhhhhccc-CCcEEEEeccHHH------HHHHHH
Q 027471 131 -RTYDLLHADHLFSTIK-------------------KRCSLK-AVVAEVDRILR-PDGNLILRDDAET------IVEVED 182 (223)
Q Consensus 131 -rtyDllH~~~lfs~~~-------------------~rC~i~-~vl~E~DRILR-PgG~~ii~D~~~~------~~~i~~ 182 (223)
..||+|=+.-=|+... ..-... .++..+=+.|+ |||.+.+--+... -.++.+
T Consensus 295 ~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk 374 (542)
T 3lkd_A 295 PTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRK 374 (542)
T ss_dssp CCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHH
T ss_pred cccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHH
Confidence 6799877654443110 000011 36788889999 9999855433322 244555
Q ss_pred H-HHhCCCeeE
Q 027471 183 L-VKSLHWDVR 192 (223)
Q Consensus 183 i-~~~l~W~~~ 192 (223)
. ++.-.-.+.
T Consensus 375 ~Lle~~~l~~I 385 (542)
T 3lkd_A 375 ALLEEGAIDTV 385 (542)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHhCCceeEE
Confidence 4 555444443
No 298
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=78.10 E-value=0.41 Score=44.35 Aligned_cols=137 Identities=17% Similarity=0.206 Sum_probs=68.9
Q ss_pred CceEEEeeCCchHHHHHHhhCCCeEEEEecCCCCCCChhhHHhhCccc---------------c-cccccccCCCCC---
Q 027471 70 FVRNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFG---------------L-YHDWCESFNTYP--- 130 (223)
Q Consensus 70 ~iRnvLDmgaG~GgFAA~L~~~~V~vmnv~p~~~~~~l~~i~eRGLi~---------------~-~~dwce~f~tyP--- 130 (223)
.-++||=+|.|-|+.++.+.+.+.--+.++..+.. -++++.+ =|+. + +.|--+-+..++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~-VVe~ar~-yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQM-VIDGCKK-YMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHH-HHHHHHH-HCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHH-HHHHHHh-hchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 35899999999999999999876533444444322 1221111 1110 1 111000000011
Q ss_pred cchhhhhhhhhhcccc---cccc-----hhHHHHhhhhcccCCcEEEEecc----HHHHHHHHHHHHhCCCeeEEe--e-
Q 027471 131 RTYDLLHADHLFSTIK---KRCS-----LKAVVAEVDRILRPDGNLILRDD----AETIVEVEDLVKSLHWDVRMI--Y- 195 (223)
Q Consensus 131 rtyDllH~~~lfs~~~---~rC~-----i~~vl~E~DRILRPgG~~ii~D~----~~~~~~i~~i~~~l~W~~~~~--~- 195 (223)
+.||+|=.+ +|.... .... -..++..+.|+|+|||.++..-. .+....+.+.++++--.+... .
T Consensus 283 ~~yDvIIvD-l~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~v~~~~~~~ 361 (381)
T 3c6k_A 283 REFDYVIND-LTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIV 361 (381)
T ss_dssp CCEEEEEEE-CCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEEEE
T ss_pred CceeEEEEC-CCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCcceEeeEEE
Confidence 458877554 232110 0000 12566778999999999987522 223344555555553333211 0
Q ss_pred ---c-CCCeeEEEEEecc
Q 027471 196 ---T-NDNQGMLCVHKTY 209 (223)
Q Consensus 196 ---~-~~~e~~L~~~K~~ 209 (223)
+ .+.-.+.+|.|++
T Consensus 362 ~VPSy~~~W~F~~aSK~~ 379 (381)
T 3c6k_A 362 CVPSYLELWVFYTVWKKA 379 (381)
T ss_dssp CCGGGSSCEEEEEEEECC
T ss_pred EecCCCCceeeeEEECCC
Confidence 1 1345677777764
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=77.11 E-value=3.9 Score=34.44 Aligned_cols=58 Identities=14% Similarity=0.091 Sum_probs=35.7
Q ss_pred chhHHHHhhhhcccCCcEEEEe-ccHHHHHHHHHHHHhCCCeeEE--e-------------ecCCCeeEEEEEec
Q 027471 150 SLKAVVAEVDRILRPDGNLILR-DDAETIVEVEDLVKSLHWDVRM--I-------------YTNDNQGMLCVHKT 208 (223)
Q Consensus 150 ~i~~vl~E~DRILRPgG~~ii~-D~~~~~~~i~~i~~~l~W~~~~--~-------------~~~~~e~~L~~~K~ 208 (223)
.+..+|.|+.|+|+|||.+++. ++.. ...+..++...-|...- . .....|-+|+..|.
T Consensus 52 ~~~~~l~~~~~~Lk~~g~i~v~~~d~~-~~~~~~~~~~~gf~~~~~iiW~K~~~~~~~~~~~~~~hE~Il~~~K~ 125 (260)
T 1g60_A 52 FTYRWIDKVLDKLDKDGSLYIFNTPFN-CAFICQYLVSKGMIFQNWITWDKRDGMGSAKRRFSTGQETILFFSKS 125 (260)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECHHH-HHHHHHHHHHTTCEEEEEEEECCCCSCCCCSSSCBCCCEEEEEEESS
T ss_pred HHHHHHHHHHHHhcCCeEEEEEcCcHH-HHHHHHHHHhhccceeEEEEEEecCCCccccCccccCCcEEEEEEeC
Confidence 3568899999999999999887 4433 23333333333333221 0 01235889999886
No 300
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=76.39 E-value=0.89 Score=50.69 Aligned_cols=42 Identities=21% Similarity=0.248 Sum_probs=15.4
Q ss_pred CCcchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEecc
Q 027471 129 YPRTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDD 173 (223)
Q Consensus 129 yPrtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~ 173 (223)
-+.+||+|-++++++...+ +...|..+.++|||||++++.+.
T Consensus 1308 ~~~~ydlvia~~vl~~t~~---~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1308 SLGKADLLVCNCALATLGD---PAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ----CCEEEEECC-----------------------CCEEEEEEC
T ss_pred CCCceeEEEEccccccccc---HHHHHHHHHHhcCCCcEEEEEec
Confidence 3477999888877654332 45778889999999999999764
No 301
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=75.89 E-value=4.5 Score=36.50 Aligned_cols=106 Identities=17% Similarity=0.208 Sum_probs=66.4
Q ss_pred eEEEeeCCchHHHHHHhh-CCCeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhcccc-ccc
Q 027471 72 RNVMDMRAVYGGFAAALK-DLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIK-KRC 149 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~-~~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~-~rC 149 (223)
.+||++|.++|..+.+|. ...|++|+=+- + ..+.....|+-.... -+..+.|..||++=.. +. +|-
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~---~-~~~~l~~~~~~~~~~---~~~~~~~~~~d~v~~~-----~Pk~k~ 114 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGRMAVERLETSR---A-AFRCLTASGLQARLA---LPWEAAAGAYDLVVLA-----LPAGRG 114 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTTBEEEEEECBH---H-HHHHHHHTTCCCEEC---CGGGSCTTCEEEEEEE-----CCGGGC
T ss_pred CcEEEecCCCCccccccCCCCceEEEeCcH---H-HHHHHHHcCCCcccc---CCccCCcCCCCEEEEE-----CCcchh
Confidence 579999999998778887 45788874211 1 222244456653211 1233456788874321 21 232
Q ss_pred --chhHHHHhhhhcccCCcEEEEec-cHHHHHHHHHHHH-hCCC
Q 027471 150 --SLKAVVAEVDRILRPDGNLILRD-DAETIVEVEDLVK-SLHW 189 (223)
Q Consensus 150 --~i~~vl~E~DRILRPgG~~ii~D-~~~~~~~i~~i~~-~l~W 189 (223)
..+..|.++.+.|+|||.+|+.- ..+-++++.+.++ .+-|
T Consensus 115 ~~~~~~~l~~~~~~l~~g~~i~~~g~~~~g~~~~~~~~~~~~~~ 158 (381)
T 3dmg_A 115 TAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEARALLGY 158 (381)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEGGGTHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEEccHHHHHHHHHHHHhhhcc
Confidence 36789999999999999998874 5555666666544 4445
No 302
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=70.43 E-value=7.8 Score=34.28 Aligned_cols=117 Identities=14% Similarity=0.245 Sum_probs=53.6
Q ss_pred EEEeeCCchHHHHHHhhCCC--eEEEEecCCCCCCChhhHHhhCcccccccccccCCCC-----Cc-chhhhhhhhh---
Q 027471 73 NVMDMRAVYGGFAAALKDLK--VWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTY-----PR-TYDLLHADHL--- 141 (223)
Q Consensus 73 nvLDmgaG~GgFAA~L~~~~--V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~ty-----Pr-tyDllH~~~l--- 141 (223)
+|+|+-||.||++..+...+ .-++=.+..+. ..-.+|.+-..... -+|+....+ +. .+|+++++-=
T Consensus 4 ~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~--~a~~~~~~N~~~~~-~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~ 80 (343)
T 1g55_A 4 RVLELYSGVGGMHHALRESCIPAQVVAAIDVNT--VANEVYKYNFPHTQ-LLAKTIEGITLEEFDRLSFDMILMSPPCQP 80 (343)
T ss_dssp EEEEETCTTCHHHHHHHHHTCSEEEEEEECCCH--HHHHHHHHHCTTSC-EECSCGGGCCHHHHHHHCCSEEEECCC---
T ss_pred eEEEeCcCccHHHHHHHHCCCCceEEEEEeCCH--HHHHHHHHhccccc-cccCCHHHccHhHcCcCCcCEEEEcCCCcc
Confidence 69999999999999998776 22221112221 11112222221110 012222222 21 5788777533
Q ss_pred hcccccccchh----HHHHhhhhcc---c--CCcEEE--Eec--cHHHHHHHHHHHHhCCCeeE
Q 027471 142 FSTIKKRCSLK----AVVAEVDRIL---R--PDGNLI--LRD--DAETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 142 fs~~~~rC~i~----~vl~E~DRIL---R--PgG~~i--i~D--~~~~~~~i~~i~~~l~W~~~ 192 (223)
||....+-.++ .++.|+=|++ | |-=+++ +.. .......+.+.++.+..++.
T Consensus 81 fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v~ 144 (343)
T 1g55_A 81 FTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQ 144 (343)
T ss_dssp ---------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGGSHHHHHHHHHHHHTTEEEE
T ss_pred hhhcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCccccCHHHHHHHHHHHHHCCCeeE
Confidence 55432221111 3555555554 4 763333 232 22355666666777777654
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=66.66 E-value=3.1 Score=35.74 Aligned_cols=30 Identities=23% Similarity=0.092 Sum_probs=21.8
Q ss_pred ceEEEeeCCchHHHHHHhhCCC--eEEEEecC
Q 027471 71 VRNVMDMRAVYGGFAAALKDLK--VWVMNVVP 100 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p 100 (223)
--.|||.+||+|+.+.+....+ ++.+.+.|
T Consensus 236 ~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~ 267 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAARWGRRALGVELVP 267 (297)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEECCCCCCHHHHHHHHcCCeEEEEeCCH
Confidence 3479999999999888776654 55555443
No 304
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=62.08 E-value=4.7 Score=35.91 Aligned_cols=37 Identities=14% Similarity=0.078 Sum_probs=26.6
Q ss_pred hccCCCCCCceEEEeeCCchHHHHHHhhCCC--eEEEEecC
Q 027471 62 NGMGINWSFVRNVMDMRAVYGGFAAALKDLK--VWVMNVVP 100 (223)
Q Consensus 62 ~~l~i~~~~iRnvLDmgaG~GgFAA~L~~~~--V~vmnv~p 100 (223)
+.|+++.+ ..++|.+||.||.+.+|++++ |+.+...|
T Consensus 16 e~L~~~~g--g~~VD~T~G~GGHS~~il~~~g~VigiD~Dp 54 (285)
T 1wg8_A 16 DLLAVRPG--GVYVDATLGGAGHARGILERGGRVIGLDQDP 54 (285)
T ss_dssp HHHTCCTT--CEEEETTCTTSHHHHHHHHTTCEEEEEESCH
T ss_pred HhhCCCCC--CEEEEeCCCCcHHHHHHHHCCCEEEEEeCCH
Confidence 34455554 379999999999999999874 55555433
No 305
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=57.98 E-value=19 Score=32.57 Aligned_cols=76 Identities=18% Similarity=0.319 Sum_probs=46.6
Q ss_pred cchhh----hhhhhhhcccccccchh-----HHHHhhhhcccCCcEEEEe----ccHHHHHHHHHHHHhCCCeeEEee--
Q 027471 131 RTYDL----LHADHLFSTIKKRCSLK-----AVVAEVDRILRPDGNLILR----DDAETIVEVEDLVKSLHWDVRMIY-- 195 (223)
Q Consensus 131 rtyDl----lH~~~lfs~~~~rC~i~-----~vl~E~DRILRPgG~~ii~----D~~~~~~~i~~i~~~l~W~~~~~~-- 195 (223)
..||| +|.-.-++||+ +|.=. .+=-..=+-|+|||.+++. -+...-..|..++++++-.....-
T Consensus 210 grYDlVfvNv~TpyR~HHYQ-QCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~P~c 288 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQ-QCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALKPPC 288 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHH-HHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTT
T ss_pred CceeEEEEecCCccccchHH-HHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeecCcc
Confidence 35888 44444455665 46322 2233445889999999998 222233456677888776654332
Q ss_pred -cCCCeeEEEEEe
Q 027471 196 -TNDNQGMLCVHK 207 (223)
Q Consensus 196 -~~~~e~~L~~~K 207 (223)
+++-|.+|+..+
T Consensus 289 v~snTEv~~vF~~ 301 (324)
T 3trk_A 289 VTSNTEMFFLFSN 301 (324)
T ss_dssp CCBTTCEEEEEEE
T ss_pred ccccceEEEEEEe
Confidence 457788888765
No 306
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=57.91 E-value=61 Score=28.59 Aligned_cols=133 Identities=13% Similarity=0.197 Sum_probs=68.0
Q ss_pred eEEEeeCCchHHHHHHhhCCCe--EEE-EecCCCCCCChhhHHhhCcccccccccccCCCC-----Cc-chhhhhhhhh-
Q 027471 72 RNVMDMRAVYGGFAAALKDLKV--WVM-NVVPIESPDTLPIIYERGLFGLYHDWCESFNTY-----PR-TYDLLHADHL- 141 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~V--~vm-nv~p~~~~~~l~~i~eRGLi~~~~dwce~f~ty-----Pr-tyDllH~~~l- 141 (223)
-+++|+=||.||+...|.+.++ -+. =.+..+. ....+|++-....+ .|+....+ |. .+|+++++-=
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~--~a~~ty~~N~~~~~--~~~DI~~~~~~~i~~~~~Dil~ggpPC 86 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSININATFIPFDINE--IANKIYSKNFKEEV--QVKNLDSISIKQIESLNCNTWFMSPPC 86 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCH--HHHHHHHHHHCCCC--BCCCTTTCCHHHHHHTCCCEEEECCCC
T ss_pred CEEEEECCChhHHHHHHHHcCCCceEEEEEEECCH--HHHHHHHHHCCCCc--ccCChhhcCHHHhccCCCCEEEecCCc
Confidence 3699999999999999987763 222 1112121 12223333322221 12233332 21 4788775422
Q ss_pred --h--ccccccc----chhHHHHhhhh-cc-----cCCcEEEEeccH------HHHHHHHHHHHhCCCeeEE--eec---
Q 027471 142 --F--STIKKRC----SLKAVVAEVDR-IL-----RPDGNLILRDDA------ETIVEVEDLVKSLHWDVRM--IYT--- 196 (223)
Q Consensus 142 --f--s~~~~rC----~i~~vl~E~DR-IL-----RPgG~~ii~D~~------~~~~~i~~i~~~l~W~~~~--~~~--- 196 (223)
| |....+- .-..++.|+=| |+ ||- +|++- +. ...+.+.+.++.+-+.+.. .+.
T Consensus 87 Q~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~-~~~lE-NV~gl~~~~~~~~i~~~l~~~GY~v~~~vl~a~~y 164 (327)
T 3qv2_A 87 QPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK-HIFIE-NVPLFKESLVFKEIYNILIKNQYYIKDIICSPIDI 164 (327)
T ss_dssp TTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS-EEEEE-ECGGGGGSHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred cCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCC-EEEEE-chhhhcChHHHHHHHHHHHhCCCEEEEEEEeHHHc
Confidence 5 4322111 11267888888 76 453 34433 22 2456666677777777642 222
Q ss_pred ---CCCeeE-EEEEeccc
Q 027471 197 ---NDNQGM-LCVHKTYW 210 (223)
Q Consensus 197 ---~~~e~~-L~~~K~~w 210 (223)
+.++++ +++.+.-|
T Consensus 165 GvPQ~R~R~fivg~r~~f 182 (327)
T 3qv2_A 165 GIPNSRTRYYVMARLTPF 182 (327)
T ss_dssp TCSBCCCEEEEEEESSCC
T ss_pred CCCccceEEEEEEEeCCC
Confidence 345555 56665433
No 307
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=53.71 E-value=10 Score=33.41 Aligned_cols=21 Identities=33% Similarity=0.599 Sum_probs=18.7
Q ss_pred hhHHHHhhhhcccCCcEEEEe
Q 027471 151 LKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 151 i~~vl~E~DRILRPgG~~ii~ 171 (223)
+..+|.|+.|+|+|||.+++.
T Consensus 85 ~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 85 AKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEE
Confidence 457889999999999999886
No 308
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=45.90 E-value=27 Score=29.53 Aligned_cols=87 Identities=16% Similarity=0.155 Sum_probs=51.2
Q ss_pred CCCCCCceEEEeeCCc-hHHHHHHhhCC-CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhh-hhhh
Q 027471 65 GINWSFVRNVMDMRAV-YGGFAAALKDL-KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLH-ADHL 141 (223)
Q Consensus 65 ~i~~~~iRnvLDmgaG-~GgFAA~L~~~-~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH-~~~l 141 (223)
++..| .+||=.||| .|.+|..|++. +.-|+-+. +++.++++.+-|.-.++.| .+.+ ++-+|++= |.
T Consensus 139 ~~~~g--~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~---~~~~~~~~~~lGa~~v~~d-~~~v---~~g~Dvv~d~~-- 207 (315)
T 3goh_A 139 PLTKQ--REVLIVGFGAVNNLLTQMLNNAGYVVDLVS---ASLSQALAAKRGVRHLYRE-PSQV---TQKYFAIFDAV-- 207 (315)
T ss_dssp CCCSC--CEEEEECCSHHHHHHHHHHHHHTCEEEEEC---SSCCHHHHHHHTEEEEESS-GGGC---CSCEEEEECC---
T ss_pred CCCCC--CEEEEECCCHHHHHHHHHHHHcCCEEEEEE---ChhhHHHHHHcCCCEEEcC-HHHh---CCCccEEEECC--
Confidence 34444 567777775 57777777654 66555554 3457888888887655544 3333 44555432 11
Q ss_pred hcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 142 FSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 142 fs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
. ...+.+.=+.|||||.++.-
T Consensus 208 ----g-----~~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 208 ----N-----SQNAAALVPSLKANGHIICI 228 (315)
T ss_dssp ---------------TTGGGEEEEEEEEEE
T ss_pred ----C-----chhHHHHHHHhcCCCEEEEE
Confidence 0 12234556889999999875
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=42.13 E-value=13 Score=33.68 Aligned_cols=47 Identities=13% Similarity=0.142 Sum_probs=32.5
Q ss_pred hhHhhhhHHHHHhhhhhhccCCCCC----CceEEEeeCCchHHHHHHhhCC----CeEEE
Q 027471 45 FTADYQHWKNVVSKSYLNGMGINWS----FVRNVMDMRAVYGGFAAALKDL----KVWVM 96 (223)
Q Consensus 45 f~~D~~~W~~~v~~~Y~~~l~i~~~----~iRnvLDmgaG~GgFAA~L~~~----~V~vm 96 (223)
|-.|.+.=.+.|.. . ++..+ .-.+|+++|.|.|.+-.+|.++ .|+++
T Consensus 34 FL~d~~i~~~Iv~~--~---~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvav 88 (353)
T 1i4w_A 34 YLWNPTVYNKIFDK--L---DLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLL 88 (353)
T ss_dssp CBCCHHHHHHHHHH--H---CGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEE
T ss_pred ccCCHHHHHHHHHh--c---cCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEE
Confidence 66666655555553 3 33332 3578999999999999999864 56665
No 310
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=39.70 E-value=41 Score=33.24 Aligned_cols=115 Identities=20% Similarity=0.284 Sum_probs=60.5
Q ss_pred CeEEEEecCCCCCC-ChhhHHhhCcccccccccccCCCCC-cchhh----hhhhhhhcccccccchhHHH-----Hhhhh
Q 027471 92 KVWVMNVVPIESPD-TLPIIYERGLFGLYHDWCESFNTYP-RTYDL----LHADHLFSTIKKRCSLKAVV-----AEVDR 160 (223)
Q Consensus 92 ~V~vmnv~p~~~~~-~l~~i~eRGLi~~~~dwce~f~tyP-rtyDl----lH~~~lfs~~~~rC~i~~vl-----~E~DR 160 (223)
.|.++.-.+...|. .+.-+..-|..|.-.+-|-.|..=+ ..||| +|.-.-.+||+ +|.=.-+. -..=+
T Consensus 179 ~vl~v~~~~~~~p~krv~wi~p~~~~ga~~~~~l~lG~p~~~ryDlvfvn~~t~yr~HHyq-QCeDHa~~l~ml~~~al~ 257 (670)
T 4gua_A 179 SVLVVSEEKIEAPRKRIEWIAPIGIAGADKNYNLAFGFPPQARYDLVFINIGTKYRNHHFQ-QCEDHAATLKTLSRSALN 257 (670)
T ss_dssp EEEEECSSCCCCTTSEEEEEECTTCTTCSEECCGGGCCCCCCCEEEEEECCCCCCCSCHHH-HHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecccccCCCceEEEecCCCCCCCceeeeccCCCCCCCcccEEEEecCCCcccchHH-HHHHHHHHHHHHhHHHHh
Confidence 44444322333332 4444555444443332222222111 46888 44444555665 47433222 23457
Q ss_pred cccCCcEEEEe----ccHHHHHHHHHHHHhCCCeeEEee---cCCCeeEEEEEe
Q 027471 161 ILRPDGNLILR----DDAETIVEVEDLVKSLHWDVRMIY---TNDNQGMLCVHK 207 (223)
Q Consensus 161 ILRPgG~~ii~----D~~~~~~~i~~i~~~l~W~~~~~~---~~~~e~~L~~~K 207 (223)
-|+|||.+++. -+...-.-|..++++++-.....- +++.|.+|+.+-
T Consensus 258 ~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~p~~~~snTEv~~~f~~ 311 (670)
T 4gua_A 258 CLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAARPDCVSSNTEMYLIFRQ 311 (670)
T ss_dssp TEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEECCTTCSBTTCEEEEEEE
T ss_pred hcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeCCCccccCceEEEEEEe
Confidence 89999999998 222223456677788776654332 355788877654
No 311
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=38.34 E-value=1.2e+02 Score=22.30 Aligned_cols=60 Identities=17% Similarity=0.235 Sum_probs=39.5
Q ss_pred cccchhHH--HHhhhhcccCCcEE-EEeccHHHHHHHHHHHHhCCCeeEEeecC-CCeeEEEEEe
Q 027471 147 KRCSLKAV--VAEVDRILRPDGNL-ILRDDAETIVEVEDLVKSLHWDVRMIYTN-DNQGMLCVHK 207 (223)
Q Consensus 147 ~rC~i~~v--l~E~DRILRPgG~~-ii~D~~~~~~~i~~i~~~l~W~~~~~~~~-~~e~~L~~~K 207 (223)
-.|.++.+ ...++. |.||..+ |+.|+......|.++++....++.....+ +.+-.+..+|
T Consensus 34 l~CP~Pvl~tkkaL~~-l~~Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e~~~~g~~~i~I~K 97 (98)
T 1jdq_A 34 EVCPVPDVETKRALQN-MKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEVGPSEWKIYIKV 97 (98)
T ss_dssp CCSSHHHHHHHHHHHT-CCTTCEEEEEESSCTHHHHHHHHHHHSSCCEEEEEECSSSCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHh-CCCCCEEEEEECCccHHHHHHHHHHHCCCEEEEEEEecCCEEEEEEEE
Confidence 46987743 334444 6788855 66688888899999999999998655433 3333344444
No 312
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=38.15 E-value=9.7 Score=33.09 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=34.1
Q ss_pred cchhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEeccH-----HHHHHHHHHHHhCCCe
Q 027471 131 RTYDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILRDDA-----ETIVEVEDLVKSLHWD 190 (223)
Q Consensus 131 rtyDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~D~~-----~~~~~i~~i~~~l~W~ 190 (223)
.++|++|.+. ..+.. ...++..+-..|+|||.+++.|-. ..-..+++++..-.-+
T Consensus 181 ~~~dlv~ID~--D~Y~~---t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~~~A~~ef~~~~~~~ 240 (257)
T 3tos_A 181 TVIALAYFDL--DLYEP---TKAVLEAIRPYLTKGSIVAFDELDNPKWPGENIAMRKVLGLDHAP 240 (257)
T ss_dssp CCEEEEEECC--CCHHH---HHHHHHHHGGGEEEEEEEEESSTTCTTCTHHHHHHHHHTCTTSSC
T ss_pred CceEEEEEcC--cccch---HHHHHHHHHHHhCCCcEEEEcCCCCCCChHHHHHHHHHHhhCCCe
Confidence 5799999873 11111 124555666779999999999852 3445566665444433
No 313
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=33.76 E-value=47 Score=30.16 Aligned_cols=54 Identities=7% Similarity=0.110 Sum_probs=31.9
Q ss_pred HHHhhhhcccCCcEEEEe----ccHHHHHHHHHHHHhCCCeeEEee---cCCCeeEEEEEe
Q 027471 154 VVAEVDRILRPDGNLILR----DDAETIVEVEDLVKSLHWDVRMIY---TNDNQGMLCVHK 207 (223)
Q Consensus 154 vl~E~DRILRPgG~~ii~----D~~~~~~~i~~i~~~l~W~~~~~~---~~~~e~~L~~~K 207 (223)
++--.-++|+|||.|+.. .+...-.-++.+.+.+.=.....- +++.|.++++..
T Consensus 236 al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~ASR~StEvf~La~g 296 (320)
T 2hwk_A 236 LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPKSSLEETEVLFVFIG 296 (320)
T ss_dssp THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTTCCSTTCEEEEEEE
T ss_pred HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeCCCCccccceEEEEEEe
Confidence 444457899999999997 212232333344454443333221 347899999875
No 314
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=33.66 E-value=2.1e+02 Score=23.98 Aligned_cols=130 Identities=13% Similarity=0.204 Sum_probs=66.3
Q ss_pred EEEeeCCchHHHHHHhhCCCeEEEEecCCCCCCChhhHHhhCccc--ccccccccCCC--CCcchhhhhhh---hhhccc
Q 027471 73 NVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFG--LYHDWCESFNT--YPRTYDLLHAD---HLFSTI 145 (223)
Q Consensus 73 nvLDmgaG~GgFAA~L~~~~V~vmnv~p~~~~~~l~~i~eRGLi~--~~~dwce~f~t--yPrtyDllH~~---~lfs~~ 145 (223)
+|+|+=||.|||...|.+-+.-++=.+..+.. ....|+.-... ...|..+ ++. +| -.|+++++ .-||..
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~--a~~ty~~N~~~~~~~~DI~~-i~~~~~~-~~D~l~ggpPCQ~fS~a 77 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKS--IWKTYESNHSAKLIKGDISK-ISSDEFP-KCDGIIGGPPSQSWSEG 77 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTT--THHHHHHHCCSEEEESCGGG-CCGGGSC-CCSEEECCCCGGGTEET
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHH--HHHHHHHHCCCCcccCChhh-CCHhhCC-cccEEEecCCCCCcCCC
Confidence 58999999999999998887655433333322 11223332222 1222221 211 33 36887763 235543
Q ss_pred ccccch----hHHHHhhhhc---ccCCcEEEEe--------ccHHHHHHHHHHHHhCCCeeE--Eeec------CCCeeE
Q 027471 146 KKRCSL----KAVVAEVDRI---LRPDGNLILR--------DDAETIVEVEDLVKSLHWDVR--MIYT------NDNQGM 202 (223)
Q Consensus 146 ~~rC~i----~~vl~E~DRI---LRPgG~~ii~--------D~~~~~~~i~~i~~~l~W~~~--~~~~------~~~e~~ 202 (223)
..+-.+ ..++.|+=|| +||- +|++- +.-+.+..+.+.++.+-+.+. +.+. +.++++
T Consensus 78 g~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vlna~~yGvPQ~R~Rv 156 (331)
T 3ubt_Y 78 GSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDRKRV 156 (331)
T ss_dssp TEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEEEEEEGGGTTCSBCCEEE
T ss_pred CCccCCCCchhHHHHHHHHHHhccCCe-EEEeeeecccccccccchhhhhhhhhccCCcEEEEEecccccCCCCcccceE
Confidence 321111 1566666666 5795 44443 222345555555666655554 2232 345664
Q ss_pred -EEEEe
Q 027471 203 -LCVHK 207 (223)
Q Consensus 203 -L~~~K 207 (223)
+++.+
T Consensus 157 fivg~r 162 (331)
T 3ubt_Y 157 FYIGFR 162 (331)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 56655
No 315
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=32.97 E-value=24 Score=29.49 Aligned_cols=27 Identities=22% Similarity=0.098 Sum_probs=19.4
Q ss_pred eEEEeeCCchHHHHHHhhCC--CeEEEEe
Q 027471 72 RNVMDMRAVYGGFAAALKDL--KVWVMNV 98 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~--~V~vmnv 98 (223)
-.|||..||.|+.+.+..+. .+..+-+
T Consensus 214 ~~vlD~f~GsGtt~~~a~~~gr~~ig~e~ 242 (260)
T 1g60_A 214 DLVLDCFMGSGTTAIVAKKLGRNFIGCDM 242 (260)
T ss_dssp CEEEESSCTTCHHHHHHHHTTCEEEEEES
T ss_pred CEEEECCCCCCHHHHHHHHcCCeEEEEeC
Confidence 47999999999977666554 4444444
No 316
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=32.10 E-value=43 Score=28.72 Aligned_cols=90 Identities=17% Similarity=0.106 Sum_probs=50.3
Q ss_pred CCCCCCceEEEeeCCch-HHHHHHhhCC-CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhh
Q 027471 65 GINWSFVRNVMDMRAVY-GGFAAALKDL-KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLF 142 (223)
Q Consensus 65 ~i~~~~iRnvLDmgaG~-GgFAA~L~~~-~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lf 142 (223)
++..| .+||-.|||. |.+|+.|++. +..|+-+.. +++.++.+.+.|.-.++.+ .....+.+|++ |
T Consensus 173 ~~~~g--~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~--~~~~~~~~~~lGa~~v~~~----~~~~~~~~D~v-----i 239 (348)
T 3two_A 173 KVTKG--TKVGVAGFGGLGSMAVKYAVAMGAEVSVFAR--NEHKKQDALSMGVKHFYTD----PKQCKEELDFI-----I 239 (348)
T ss_dssp TCCTT--CEEEEESCSHHHHHHHHHHHHTTCEEEEECS--SSTTHHHHHHTTCSEEESS----GGGCCSCEEEE-----E
T ss_pred CCCCC--CEEEEECCcHHHHHHHHHHHHCCCeEEEEeC--CHHHHHHHHhcCCCeecCC----HHHHhcCCCEE-----E
Confidence 34444 4677788875 6677776553 555544422 2346788888776544421 11122244442 1
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
..... +..+.+.=+.|||||.+++-
T Consensus 240 d~~g~----~~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 240 STIPT----HYDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp ECCCS----CCCHHHHHTTEEEEEEEEEC
T ss_pred ECCCc----HHHHHHHHHHHhcCCEEEEE
Confidence 11111 12566667899999999985
No 317
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=31.40 E-value=31 Score=30.36 Aligned_cols=116 Identities=20% Similarity=0.300 Sum_probs=58.2
Q ss_pred eEEEeeCCchHHHHHHhhCCCeEEEEecCCCCC--CChhhHHhhCcccccccccccCC-CCCcchhhhhhh---hhhccc
Q 027471 72 RNVMDMRAVYGGFAAALKDLKVWVMNVVPIESP--DTLPIIYERGLFGLYHDWCESFN-TYPRTYDLLHAD---HLFSTI 145 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~V~vmnv~p~~~~--~~l~~i~eRGLi~~~~dwce~f~-tyPrtyDllH~~---~lfs~~ 145 (223)
-+++|+-||.||++..+...+.-++=.+..+.. .+.+.++..-. ..|..+-.. ..| .+|+|+++ .-||..
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~---~~Di~~~~~~~~~-~~D~l~~gpPCQ~fS~a 87 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP---EGDITQVNEKTIP-DHDILCAGFPCQAFSIS 87 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC---BSCGGGSCGGGSC-CCSEEEEECCCTTTCTT
T ss_pred CcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC---cCCHHHcCHhhCC-CCCEEEECCCCCCcchh
Confidence 479999999999999998887655433333321 23333332111 112111111 122 37777764 234432
Q ss_pred ccccchh----HHHHhhhhc---ccCCcEEEEe--------ccHHHHHHHHHHHHhCCCeeE
Q 027471 146 KKRCSLK----AVVAEVDRI---LRPDGNLILR--------DDAETIVEVEDLVKSLHWDVR 192 (223)
Q Consensus 146 ~~rC~i~----~vl~E~DRI---LRPgG~~ii~--------D~~~~~~~i~~i~~~l~W~~~ 192 (223)
..+-.++ .++.|+=|+ +||- +|++- +.-.....+.+.++.+...+.
T Consensus 88 g~~~g~~d~r~~L~~~~~r~i~~~~P~-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~ 148 (327)
T 2c7p_A 88 GKQKGFEDSRGTLFFDIARIVREKKPK-VVFMENVKNFASHDNGNTLEVVKNTMNELDYSFH 148 (327)
T ss_dssp SCCCGGGSTTSCHHHHHHHHHHHHCCS-EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCE
T ss_pred cccCCCcchhhHHHHHHHHHHHhccCc-EEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEE
Confidence 2221111 355555555 5785 44443 112244556666666665543
No 318
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=31.28 E-value=19 Score=30.14 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=21.6
Q ss_pred ceEEEeeCCchHHHHHHhh----CCCeEEEEe
Q 027471 71 VRNVMDMRAVYGGFAAALK----DLKVWVMNV 98 (223)
Q Consensus 71 iRnvLDmgaG~GgFAA~L~----~~~V~vmnv 98 (223)
---|||+|-|-|--=-.|+ ++.|||+.-
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 3359999999998766665 569999864
No 319
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=30.25 E-value=30 Score=27.64 Aligned_cols=53 Identities=21% Similarity=0.392 Sum_probs=34.7
Q ss_pred CC-cchhhhhhhhhhcccc-cccch-hHHHHhhhhcccCCcEEEEeccHHHHHHHHHHHHhC
Q 027471 129 YP-RTYDLLHADHLFSTIK-KRCSL-KAVVAEVDRILRPDGNLILRDDAETIVEVEDLVKSL 187 (223)
Q Consensus 129 yP-rtyDllH~~~lfs~~~-~rC~i-~~vl~E~DRILRPgG~~ii~D~~~~~~~i~~i~~~l 187 (223)
.| .|||+||-- .... +.-.+ ..+|-=+-+-|||||.|.- .+...+++.|+..+
T Consensus 55 Lp~stYD~V~~l---t~~~~~~~~l~r~li~~l~~aLkpgG~L~g---l~~~~~~EailaGf 110 (136)
T 2km1_A 55 LENAKYETVHYL---TPEAQTDIKFPKKLISVLADSLKPNGSLIG---LSDIYKVDALINGF 110 (136)
T ss_dssp CCSSSCCSEEEE---CCCSSCSCCCCHHHHHHHHTTCCTTCCEEC---CCHHHHHHHHHHTE
T ss_pred CCcccccEEEEe---cCCccchhhcCHHHHHHHHHHhCCCCEEEe---cCcchhhHHHhhcc
Confidence 56 999999862 1111 11122 4788889999999999996 22235677777665
No 320
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=29.48 E-value=27 Score=30.27 Aligned_cols=92 Identities=8% Similarity=0.038 Sum_probs=48.9
Q ss_pred CCCCCCceEEEeeCCch-HHHHHHhhCC-C---eEEEEecCCCCCCChhhHHhhCccccccc----ccccCCC-CCcchh
Q 027471 65 GINWSFVRNVMDMRAVY-GGFAAALKDL-K---VWVMNVVPIESPDTLPIIYERGLFGLYHD----WCESFNT-YPRTYD 134 (223)
Q Consensus 65 ~i~~~~iRnvLDmgaG~-GgFAA~L~~~-~---V~vmnv~p~~~~~~l~~i~eRGLi~~~~d----wce~f~t-yPrtyD 134 (223)
++..+ .+||-+|||. |.+|+.|++. + |.+... +++.++++.+.|.-.++.. +-+.+.. .+.-+|
T Consensus 187 ~~~~g--~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~----~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D 260 (371)
T 1f8f_A 187 KVTPA--SSFVTWGAGAVGLSALLAAKVCGASIIIAVDI----VESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVN 260 (371)
T ss_dssp CCCTT--CEEEEESCSHHHHHHHHHHHHHTCSEEEEEES----CHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEE
T ss_pred CCCCC--CEEEEECCCHHHHHHHHHHHHcCCCeEEEECC----CHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCc
Confidence 44444 4788899885 6677777653 3 444332 2235677777775333221 0000000 001233
Q ss_pred hhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 135 LLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 135 llH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
++ |.. ..-...+.+.=+.|||||.+++-
T Consensus 261 ~v-----id~----~g~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 261 FA-----LES----TGSPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EE-----EEC----SCCHHHHHHHHHTEEEEEEEEEC
T ss_pred EE-----EEC----CCCHHHHHHHHHHHhcCCEEEEe
Confidence 32 111 11235677888999999999875
No 321
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=28.89 E-value=38 Score=29.24 Aligned_cols=94 Identities=15% Similarity=0.067 Sum_probs=47.6
Q ss_pred CCCCCCceEEEeeCCch-HHHHHHhhC-CCe-EEEEecCCCCCCChhhHHhhCccccccc-------ccccCCC-CCcch
Q 027471 65 GINWSFVRNVMDMRAVY-GGFAAALKD-LKV-WVMNVVPIESPDTLPIIYERGLFGLYHD-------WCESFNT-YPRTY 133 (223)
Q Consensus 65 ~i~~~~iRnvLDmgaG~-GgFAA~L~~-~~V-~vmnv~p~~~~~~l~~i~eRGLi~~~~d-------wce~f~t-yPrty 133 (223)
++..| .+||-.|||. |.+|+.|++ .+. .|+-+.. +++.++++.+-|.-.++.. +-+.+.. .++.+
T Consensus 168 ~~~~g--~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~ 243 (356)
T 1pl8_A 168 GVTLG--HKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDL--SATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKP 243 (356)
T ss_dssp TCCTT--CEEEEECCSHHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CCCCC--CEEEEECCCHHHHHHHHHHHHcCCCEEEEECC--CHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCC
Confidence 45554 4688889874 777777765 344 3332211 2235677777775432210 0000000 00123
Q ss_pred hhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 134 DLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 134 DllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
|++ |.. ..-...+.+.=+.|||||.+++-
T Consensus 244 D~v-----id~----~g~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 244 EVT-----IEC----TGAEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp SEE-----EEC----SCCHHHHHHHHHHSCTTCEEEEC
T ss_pred CEE-----EEC----CCChHHHHHHHHHhcCCCEEEEE
Confidence 332 111 11234667777999999999874
No 322
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=26.36 E-value=53 Score=28.03 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=29.8
Q ss_pred CCCCCCceEEEeeCCc--hHHHHHHhhCC-CeEEEEecCCCCCCChhhHHhhCcc
Q 027471 65 GINWSFVRNVMDMRAV--YGGFAAALKDL-KVWVMNVVPIESPDTLPIIYERGLF 116 (223)
Q Consensus 65 ~i~~~~iRnvLDmgaG--~GgFAA~L~~~-~V~vmnv~p~~~~~~l~~i~eRGLi 116 (223)
++..| .+||-+||| .|.+++.+++. +..|+-+.. +++.++.+.+-|.-
T Consensus 141 ~~~~g--~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~~~~~lga~ 191 (340)
T 3gms_A 141 NLQRN--DVLLVNACGSAIGHLFAQLSQILNFRLIAVTR--NNKHTEELLRLGAA 191 (340)
T ss_dssp CCCTT--CEEEESSTTSHHHHHHHHHHHHHTCEEEEEES--SSTTHHHHHHHTCS
T ss_pred ccCCC--CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC--CHHHHHHHHhCCCc
Confidence 45544 578888875 88888877654 554443322 23467777776653
No 323
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=25.35 E-value=33 Score=29.68 Aligned_cols=93 Identities=13% Similarity=0.132 Sum_probs=46.4
Q ss_pred CCCCCCceEEEeeCCc-hHHHHHHhhCC-CeEEEEecCCCCCCChhhHHhhCcccccc-----cccccCCCCCcchhhhh
Q 027471 65 GINWSFVRNVMDMRAV-YGGFAAALKDL-KVWVMNVVPIESPDTLPIIYERGLFGLYH-----DWCESFNTYPRTYDLLH 137 (223)
Q Consensus 65 ~i~~~~iRnvLDmgaG-~GgFAA~L~~~-~V~vmnv~p~~~~~~l~~i~eRGLi~~~~-----dwce~f~tyPrtyDllH 137 (223)
++..| .+||-.||| .|.+++.|++. +.-|+-+.. +++.++++.+-|.-.++. ++-+.+. +.+|++-
T Consensus 176 ~~~~g--~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~--~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~---~~~D~vi 248 (360)
T 1piw_A 176 GCGPG--KKVGIVGLGGIGSMGTLISKAMGAETYVISR--SSRKREDAMKMGADHYIATLEEGDWGEKYF---DTFDLIV 248 (360)
T ss_dssp TCSTT--CEEEEECCSHHHHHHHHHHHHHTCEEEEEES--SSTTHHHHHHHTCSEEEEGGGTSCHHHHSC---SCEEEEE
T ss_pred CCCCC--CEEEEECCCHHHHHHHHHHHHCCCEEEEEcC--CHHHHHHHHHcCCCEEEcCcCchHHHHHhh---cCCCEEE
Confidence 45554 578888875 46677776653 433333322 233677777767533321 1111111 2344421
Q ss_pred hhhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 138 ADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 138 ~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
....... ...+.+.=+.|||||.+++-
T Consensus 249 -----d~~g~~~--~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 249 -----VCASSLT--DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp -----ECCSCST--TCCTTTGGGGEEEEEEEEEC
T ss_pred -----ECCCCCc--HHHHHHHHHHhcCCCEEEEe
Confidence 1111100 12344556789999988863
No 324
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=25.01 E-value=61 Score=28.62 Aligned_cols=30 Identities=7% Similarity=-0.061 Sum_probs=25.7
Q ss_pred CCceEEEeeCCchHHHHHHhhC--CCeEEEEe
Q 027471 69 SFVRNVMDMRAVYGGFAAALKD--LKVWVMNV 98 (223)
Q Consensus 69 ~~iRnvLDmgaG~GgFAA~L~~--~~V~vmnv 98 (223)
...+.|+.+|||+.+.+-+|.. .++.+..|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~Ev 127 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDI 127 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEEC
Confidence 4579999999999999999986 47877776
No 325
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=23.71 E-value=2e+02 Score=24.11 Aligned_cols=98 Identities=17% Similarity=0.167 Sum_probs=55.0
Q ss_pred EEEeeCCchH--HHHHHhhCC--CeEEEEecCCCCCCChhhHHhhCcccccccccccCCCCCcchhhhhhhhhhcccccc
Q 027471 73 NVMDMRAVYG--GFAAALKDL--KVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTYPRTYDLLHADHLFSTIKKR 148 (223)
Q Consensus 73 nvLDmgaG~G--gFAA~L~~~--~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~tyPrtyDllH~~~lfs~~~~r 148 (223)
+|-=+|+|+= ++|..|.+. .|.+.|..+. ..+.+.+.|+.. . .+. -|++.|+-+|....+.
T Consensus 17 ~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~----~~~~~~~~g~~~-~-------~~~---~~~~~aDvvi~~vp~~ 81 (296)
T 3qha_A 17 KLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE----AMTPLAEAGATL-A-------DSV---ADVAAADLIHITVLDD 81 (296)
T ss_dssp CEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT----TSHHHHHTTCEE-C-------SSH---HHHTTSSEEEECCSSH
T ss_pred eEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH----HHHHHHHCCCEE-c-------CCH---HHHHhCCEEEEECCCh
Confidence 4556788863 377788776 5666665332 455566666431 1 111 1223344455544443
Q ss_pred cchhHHHHhhhhcccCCcEEEEecc--HHHHHHHHHHHH
Q 027471 149 CSLKAVVAEVDRILRPDGNLILRDD--AETIVEVEDLVK 185 (223)
Q Consensus 149 C~i~~vl~E~DRILRPgG~~ii~D~--~~~~~~i~~i~~ 185 (223)
-.++.++.++-..|+||-.+|-..+ .....++.+.+.
T Consensus 82 ~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~ 120 (296)
T 3qha_A 82 AQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLK 120 (296)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHH
Confidence 3456777888888999887776533 333445555444
No 326
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=22.18 E-value=40 Score=29.62 Aligned_cols=42 Identities=26% Similarity=0.237 Sum_probs=25.7
Q ss_pred eEEEeeCCch-HHHHHHhhCC-Ce-EEEEecCCCCCCChhhHHhhCc
Q 027471 72 RNVMDMRAVY-GGFAAALKDL-KV-WVMNVVPIESPDTLPIIYERGL 115 (223)
Q Consensus 72 RnvLDmgaG~-GgFAA~L~~~-~V-~vmnv~p~~~~~~l~~i~eRGL 115 (223)
.+||-+|||. |.+|+.|++. +. .|+-+.. +++.++++.+-|.
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~~a~~lGa 231 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARLLGAACVIVGDQ--NPERLKLLSDAGF 231 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEES--CHHHHHHHHTTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHHHHHHHHHcCC
Confidence 4788899876 7788777653 43 3333321 2235677777775
No 327
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=22.04 E-value=79 Score=27.19 Aligned_cols=105 Identities=8% Similarity=0.004 Sum_probs=59.4
Q ss_pred eEEEeeCCchHHHHHHhhCCCeEEEEecCCCCCCChhhHHhhCcccccccccccCCCC-Ccchhhhhhhhhhcccccccc
Q 027471 72 RNVMDMRAVYGGFAAALKDLKVWVMNVVPIESPDTLPIIYERGLFGLYHDWCESFNTY-PRTYDLLHADHLFSTIKKRCS 150 (223)
Q Consensus 72 RnvLDmgaG~GgFAA~L~~~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwce~f~ty-PrtyDllH~~~lfs~~~~rC~ 150 (223)
++||.+|...|.+++.|....|.++.-. . +........-|.-.... ..++.- |..||++=. -.-+.+-.
T Consensus 21 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~pk~~~~ 90 (343)
T 2pjd_A 21 SRILFAGDLQDDLPARLDTAASRAHTQQ-F--HHWQVLSRQMGDNARFS---LVATADDVADCDTLIY----YWPKNKPE 90 (343)
T ss_dssp CEEEEEECCCSSHHHHSCCSEEEEEESB-H--HHHHHHHHHHGGGEEEC---SSCCHHHHTTCSEEEE----ECCSSHHH
T ss_pred CeEEEEcCCCChhhhhhhhCCCEEEECC-H--HHHHHHHhhcCCceEec---cCCCccccCCCCEEEE----ECCCChHH
Confidence 5899999999999999987788876521 1 11111111103221111 111111 234664211 11123455
Q ss_pred hhHHHHhhhhcccCCcEEEEec-cHHHHHHHHHHHHh
Q 027471 151 LKAVVAEVDRILRPDGNLILRD-DAETIVEVEDLVKS 186 (223)
Q Consensus 151 i~~vl~E~DRILRPgG~~ii~D-~~~~~~~i~~i~~~ 186 (223)
++.+|..+-+.|.||+.+++.. ....+..+.+++..
T Consensus 91 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 127 (343)
T 2pjd_A 91 AQFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLAD 127 (343)
T ss_dssp HHHHHHHHHTTSCTTCEEEEEEEGGGTGGGHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEEecCCCHHhHHHHHHH
Confidence 6788999999999999998874 33445555555444
No 328
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=22.03 E-value=15 Score=33.11 Aligned_cols=12 Identities=33% Similarity=0.719 Sum_probs=11.0
Q ss_pred CCcchhhhhhhh
Q 027471 129 YPRTYDLLHADH 140 (223)
Q Consensus 129 yPrtyDllH~~~ 140 (223)
||.|||++|.+|
T Consensus 203 ~~GsFD~~h~GH 214 (341)
T 3elb_A 203 VAGAFDLFHIGH 214 (341)
T ss_dssp EEECCTTCCHHH
T ss_pred EecccCCCCHHH
Confidence 899999999984
No 329
>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*
Probab=21.46 E-value=46 Score=24.03 Aligned_cols=20 Identities=20% Similarity=0.620 Sum_probs=16.4
Q ss_pred HhhhhcccCCcEEEEeccHH
Q 027471 156 AEVDRILRPDGNLILRDDAE 175 (223)
Q Consensus 156 ~E~DRILRPgG~~ii~D~~~ 175 (223)
.|..++|++.|.|++|+...
T Consensus 17 ~~Ae~lL~~~G~FLVR~S~~ 36 (104)
T 1mil_A 17 REAEALLQLNGDFLVRESTT 36 (104)
T ss_dssp HHHHTTCCSTTEEEEEECCS
T ss_pred HHHHHHhccCCcEEEEeCCC
Confidence 47778888999999997753
No 330
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=21.20 E-value=44 Score=29.23 Aligned_cols=91 Identities=14% Similarity=0.174 Sum_probs=47.1
Q ss_pred CCCCCCceEEEeeCCch-HHHHHHhhC-CCeEEEEecCCCCCCChhhHHhhCcccccc----cccccCCCCCcchhhhhh
Q 027471 65 GINWSFVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESPDTLPIIYERGLFGLYH----DWCESFNTYPRTYDLLHA 138 (223)
Q Consensus 65 ~i~~~~iRnvLDmgaG~-GgFAA~L~~-~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~----dwce~f~tyPrtyDllH~ 138 (223)
++..| .+||-.|||. |.+|+.|++ .+..|+-+.. +++.++.+.+-|...++. ++-+.+. +.+|++
T Consensus 191 ~~~~g--~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~--~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvv-- 261 (369)
T 1uuf_A 191 QAGPG--KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTT--SEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFI-- 261 (369)
T ss_dssp TCCTT--CEEEEECCSHHHHHHHHHHHHTTCEEEEEES--SGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEE--
T ss_pred CCCCC--CEEEEECCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEE--
Confidence 44444 5678888874 777777765 3544433322 233667777766432221 1111110 233432
Q ss_pred hhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 139 DHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 139 ~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
|..... ...+.+.=++|||||.+++-
T Consensus 262 ---id~~g~----~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 262 ---LNTVAA----PHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp ---EECCSS----CCCHHHHHTTEEEEEEEEEC
T ss_pred ---EECCCC----HHHHHHHHHHhccCCEEEEe
Confidence 111111 13455667899999998874
No 331
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=21.10 E-value=41 Score=28.18 Aligned_cols=84 Identities=18% Similarity=0.259 Sum_probs=44.4
Q ss_pred ceEEEeeCC--chHHHHHHhhC-CCeEEEEecCCCCCCChhhHHhhCcccccc-----cccccCCCCCcchhhhhhhhhh
Q 027471 71 VRNVMDMRA--VYGGFAAALKD-LKVWVMNVVPIESPDTLPIIYERGLFGLYH-----DWCESFNTYPRTYDLLHADHLF 142 (223)
Q Consensus 71 iRnvLDmga--G~GgFAA~L~~-~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~-----dwce~f~tyPrtyDllH~~~lf 142 (223)
-.+||-.|| |.|.+++.+++ .+..|+-+.. +++.++.+.+-|.-.++. ++.+.+ +.+|+ +|
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~--~~~~~~~~~~~ga~~~~~~~~~~~~~~~~----~~~d~-----vi 194 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS--RPEKLALPLALGAEEAATYAEVPERAKAW----GGLDL-----VL 194 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES--SGGGSHHHHHTTCSEEEEGGGHHHHHHHT----TSEEE-----EE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHhcCCCEEEECCcchhHHHHh----cCceE-----EE
Confidence 357999997 67777777754 3554444432 123556666655322211 111111 12332 22
Q ss_pred cccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 143 STIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 143 s~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
. ... ..+.+.=+.|||||.++.-
T Consensus 195 d-~g~-----~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 195 E-VRG-----KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp E-CSC-----TTHHHHHTTEEEEEEEEEC
T ss_pred E-CCH-----HHHHHHHHhhccCCEEEEE
Confidence 2 111 2455666889999998864
No 332
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=20.97 E-value=61 Score=27.78 Aligned_cols=94 Identities=15% Similarity=0.089 Sum_probs=46.4
Q ss_pred CCCCCCceEEEeeCCch-HHHHHHhhC-CCeEEEEecCCCCCCChhhHHhhCccccccccc-ccCCC-----C----Ccc
Q 027471 65 GINWSFVRNVMDMRAVY-GGFAAALKD-LKVWVMNVVPIESPDTLPIIYERGLFGLYHDWC-ESFNT-----Y----PRT 132 (223)
Q Consensus 65 ~i~~~~iRnvLDmgaG~-GgFAA~L~~-~~V~vmnv~p~~~~~~l~~i~eRGLi~~~~dwc-e~f~t-----y----Prt 132 (223)
++..+ .+||-.|||- |.+|+.|++ .+.-|+-+.. +++.++.+.+-|.-.++..-- +.+.. . .+.
T Consensus 165 ~~~~g--~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~--~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 165 GVQLG--TTVLVIGAGPIGLVSVLAAKAYGAFVVCTAR--SPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp TCCTT--CEEEEECCSHHHHHHHHHHHHTTCEEEEEES--CHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CCCCC--CEEEEECCCHHHHHHHHHHHHcCCEEEEEcC--CHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCC
Confidence 45554 4677788864 667777765 3433322211 223566676767543221000 00000 0 012
Q ss_pred hhhhhhhhhhcccccccchhHHHHhhhhcccCCcEEEEe
Q 027471 133 YDLLHADHLFSTIKKRCSLKAVVAEVDRILRPDGNLILR 171 (223)
Q Consensus 133 yDllH~~~lfs~~~~rC~i~~vl~E~DRILRPgG~~ii~ 171 (223)
+|++ |.. ..-...+.+.=+.|||||.+++-
T Consensus 241 ~D~v-----id~----~g~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 241 PNVT-----IDC----SGNEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp CSEE-----EEC----SCCHHHHHHHHHHSCTTCEEEEC
T ss_pred CCEE-----EEC----CCCHHHHHHHHHHHhcCCEEEEE
Confidence 2321 111 11224567777899999999875
No 333
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=20.68 E-value=2.2e+02 Score=19.74 Aligned_cols=59 Identities=19% Similarity=0.282 Sum_probs=38.8
Q ss_pred ccchhHH--HHhhhhcccCCcEE-EEeccHHHHHHHHHHHHhCCCeeEEeecCCCeeEEEEEe
Q 027471 148 RCSLKAV--VAEVDRILRPDGNL-ILRDDAETIVEVEDLVKSLHWDVRMIYTNDNQGMLCVHK 207 (223)
Q Consensus 148 rC~i~~v--l~E~DRILRPgG~~-ii~D~~~~~~~i~~i~~~l~W~~~~~~~~~~e~~L~~~K 207 (223)
.|.++.+ ...++ =|.||..+ |+.|+......|.+.++...+++.....++..-.+..+|
T Consensus 19 ~CP~Pvl~~kkal~-~l~~G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~~~~~~~~i~I~K 80 (82)
T 3lvj_C 19 RCPEPVMMVRKTVR-NMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK 80 (82)
T ss_dssp CTTHHHHHHHHHHH-TSCTTCEEEEEECCTTHHHHHHHHHHHTTCEEEEEECSSSSEEEEEEC
T ss_pred CCCHHHHHHHHHHH-hCCCCCEEEEEECCccHHHHHHHHHHHCCCEEEEEEecCCEEEEEEEE
Confidence 6877633 22232 24688855 666888888899999999999986654444444455555
Done!