Query 027477
Match_columns 223
No_of_seqs 167 out of 1442
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 17:40:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027477.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027477hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2igv_A Peptidyl-prolyl CIS-tra 100.0 5.5E-55 1.9E-59 349.9 22.1 170 45-215 3-172 (173)
2 1a58_A Cyclophilin; isomerase, 100.0 3E-54 1E-58 346.8 22.7 172 44-215 5-177 (177)
3 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.8E-54 6E-59 350.8 20.2 177 38-222 8-187 (188)
4 1qng_A Peptidyl-prolyl CIS-tra 100.0 2.4E-54 8.1E-59 345.3 20.6 169 44-214 2-170 (170)
5 2wfi_A Peptidyl-prolyl CIS-tra 100.0 5.1E-54 1.8E-58 345.9 22.3 171 44-214 8-179 (179)
6 2poy_A Peptidyl-prolyl CIS-tra 100.0 4.8E-54 1.6E-58 347.5 21.1 171 42-213 16-186 (186)
7 2he9_A NK-tumor recognition pr 100.0 1E-53 3.5E-58 347.2 22.3 175 42-216 16-191 (192)
8 2cmt_A Peptidyl-prolyl CIS-tra 100.0 2.9E-53 1E-57 339.3 21.2 166 42-215 7-172 (172)
9 2r99_A Peptidyl-prolyl CIS-tra 100.0 4.8E-53 1.6E-57 338.5 21.7 165 43-215 9-173 (173)
10 4fru_A Cyclophilin B, peptidyl 100.0 2E-53 6.8E-58 344.4 19.7 169 40-215 7-175 (185)
11 2haq_A Cyclophilin; rotamase, 100.0 3.6E-53 1.2E-57 338.5 20.3 166 40-214 6-172 (172)
12 2z6w_A Peptidyl-prolyl CIS-tra 100.0 6.4E-53 2.2E-57 335.5 20.7 162 45-215 3-165 (165)
13 3pmp_A Cyclophilin A; peptidyl 100.0 8.5E-53 2.9E-57 334.7 21.3 163 45-215 2-164 (164)
14 1mzw_A Cyclophilin H, U-snRNP- 100.0 7.4E-53 2.5E-57 338.6 20.3 169 44-214 9-177 (177)
15 3rdd_A Peptidyl-prolyl CIS-tra 100.0 1.2E-52 4.2E-57 339.1 21.3 168 40-215 17-184 (184)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 2.6E-51 8.8E-56 333.5 21.7 166 43-216 25-192 (193)
17 1z81_A Cyclophilin; structural 100.0 1.8E-51 6.1E-56 341.3 19.2 169 44-214 58-229 (229)
18 2c3b_A Ppiase, cyclophilin; is 100.0 1.9E-51 6.6E-56 328.9 14.8 162 44-214 2-172 (172)
19 2ose_A Probable peptidyl-proly 100.0 5.7E-51 2E-55 340.1 16.9 180 42-223 11-215 (234)
20 2poe_A Cyclophilin-like protei 100.0 2.4E-50 8.2E-55 325.8 16.3 155 57-222 23-182 (185)
21 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.7E-49 6E-54 314.7 17.5 154 56-220 6-161 (161)
22 1zkc_A Peptidyl-prolyl CIS-tra 100.0 2.7E-49 9.2E-54 321.8 16.2 156 56-222 25-182 (197)
23 3bo7_A Peptidyl-prolyl CIS-tra 100.0 5.2E-49 1.8E-53 322.1 17.9 157 56-223 12-181 (201)
24 1ihg_A Cyclophilin 40; ppiase 100.0 2.3E-48 7.7E-53 345.1 21.6 172 45-217 15-187 (370)
25 2b71_A Cyclophilin-like protei 100.0 5.8E-48 2E-52 313.9 17.4 157 45-217 38-195 (196)
26 2fu0_A Cyclophilin, putative; 100.0 8.9E-48 3E-52 304.3 17.7 148 56-214 11-159 (160)
27 2x7k_A Peptidyl-prolyl CIS-tra 100.0 8E-48 2.7E-52 306.3 17.5 154 45-214 11-165 (166)
28 2hq6_A Serologically defined c 100.0 1.2E-47 4E-52 309.9 17.3 165 39-220 18-185 (185)
29 1w74_A Peptidyl-prolyl CIS-tra 100.0 5.3E-47 1.8E-51 307.3 18.0 164 42-214 20-191 (191)
30 2k7n_A Peptidyl-prolyl CIS-tra 100.0 3E-47 1E-51 310.8 16.6 160 45-220 11-171 (203)
31 2a2n_A Peptidylprolyl isomeras 100.0 5.2E-47 1.8E-51 304.0 16.5 147 56-213 27-175 (176)
32 3bkp_A Cyclophilin; malaria, i 100.0 2.3E-46 8E-51 311.7 17.0 168 38-222 14-200 (232)
33 1v9t_A Cyclophilin B; beta bar 100.0 4.5E-45 1.5E-49 290.8 14.7 153 45-215 4-166 (166)
34 1lop_A Cyclophilin A; rotamase 100.0 2.8E-45 9.6E-50 291.4 12.9 146 56-215 5-164 (164)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 2.5E-44 8.7E-49 286.8 14.9 146 56-214 9-167 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.2E-38 4E-43 279.8 11.7 158 35-210 158-355 (369)
37 3kop_A Uncharacterized protein 93.9 0.4 1.4E-05 37.6 9.1 33 49-82 23-55 (188)
38 2nnz_A Hypothetical protein; b 89.8 0.55 1.9E-05 35.9 5.4 105 50-192 32-143 (153)
39 2k9u_B Filamin-binding LIM pro 34.1 26 0.00091 18.0 1.9 18 150-167 2-19 (26)
40 1zx8_A Hypothetical protein TM 31.1 42 0.0014 24.8 3.4 45 143-192 74-124 (136)
41 4i62_A Amino acid ABC transpor 27.3 15 0.00052 28.5 0.4 12 61-72 40-51 (269)
42 2a3m_A COG3005: nitrate/TMAO r 24.4 19 0.00067 26.1 0.5 6 10-15 2-7 (130)
43 4ank_A Transthyretin; hormone 21.4 35 0.0012 25.6 1.4 15 55-69 41-55 (147)
No 1
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=5.5e-55 Score=349.89 Aligned_cols=170 Identities=60% Similarity=1.091 Sum_probs=162.6
Q ss_pred cceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCC
Q 027477 45 THRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGS 124 (223)
Q Consensus 45 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 124 (223)
+++||||+++++++.|+|+||||++.||+||+||++||++.+|++..+++++|+|+.||||+|+|||||||+..++|.++
T Consensus 3 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg 82 (173)
T 2igv_A 3 RSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGG 82 (173)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCC
Confidence 57899999999999999999999999999999999999987777777888899999999999999999999988889999
Q ss_pred CCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCCc
Q 027477 125 DSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRK 204 (223)
Q Consensus 125 ~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~~ 204 (223)
.++|+..|++|++.++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+ ..++.+++|.+
T Consensus 83 ~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~-~~~t~~~~P~~ 161 (173)
T 2igv_A 83 ESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVE-SNGSQSGKPVK 161 (173)
T ss_dssp CBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHH-TTCCTTSCCSS
T ss_pred CccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHH-hCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 77778899999
Q ss_pred ceEEeeeeeec
Q 027477 205 KVTIADSGEIP 215 (223)
Q Consensus 205 ~i~I~~cg~l~ 215 (223)
+|+|.+||+|+
T Consensus 162 ~v~I~~~g~l~ 172 (173)
T 2igv_A 162 DCMIADCGQLK 172 (173)
T ss_dssp CEEEEEEEEEC
T ss_pred CEEEEEeEEEc
Confidence 99999999986
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=3e-54 Score=346.80 Aligned_cols=172 Identities=51% Similarity=0.881 Sum_probs=160.3
Q ss_pred ccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCC-CCcccccCCceeEeeeCcEEEecccccCCCC
Q 027477 44 ITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGAS-GKPLHFKGKPFHRIVSGFVIQGGDIVRGDGK 122 (223)
Q Consensus 44 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~-~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~ 122 (223)
.+++||||+.+++++.|+|+||||++.||+||+||++||++.++.+.. +++.+|+|+.||||+|+|||||||+..+++.
T Consensus 5 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 84 (177)
T 1a58_A 5 DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGT 84 (177)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSS
T ss_pred CCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCC
Confidence 467999999999999999999999999999999999999987766543 5667899999999999999999999888899
Q ss_pred CCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCC
Q 027477 123 GSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKP 202 (223)
Q Consensus 123 ~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P 202 (223)
++.++|+..|++|++.++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+....+.+++|
T Consensus 85 gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P 164 (177)
T 1a58_A 85 GGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRP 164 (177)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999995555577999
Q ss_pred CcceEEeeeeeec
Q 027477 203 RKKVTIADSGEIP 215 (223)
Q Consensus 203 ~~~i~I~~cg~l~ 215 (223)
.++|+|.+||+|.
T Consensus 165 ~~~v~I~~~G~l~ 177 (177)
T 1a58_A 165 LADVVILNCGELV 177 (177)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCeEEEEeEEEC
Confidence 9999999999983
No 3
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.8e-54 Score=350.78 Aligned_cols=177 Identities=54% Similarity=0.924 Sum_probs=164.0
Q ss_pred ccccccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCccc-ccCCceeEeeeCcEEEeccc
Q 027477 38 EEDVFEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLH-FKGKPFHRIVSGFVIQGGDI 116 (223)
Q Consensus 38 ~~~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~-Y~g~~f~ri~~~~~iq~Gd~ 116 (223)
....|.++++||||+.+++++.|+|+||||++.||+||+||++||++.+| + |+|+.||||+++|||||||+
T Consensus 8 ~~~~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~ 79 (188)
T 3ich_A 8 KKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKG--------FGYKNSKFHRVIKDFMIQGGDF 79 (188)
T ss_dssp -CCSCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBCCEEETTTEEEECCT
T ss_pred CCCCCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCC--------ccccCCEEEEEECCCEEEcCCc
Confidence 34557889999999999999999999999999999999999999986554 5 99999999999999999997
Q ss_pred ccCCCCCCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCC
Q 027477 117 VRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAG 196 (223)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~ 196 (223)
..+++.++.++||..|++|++.++|+++|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|+....
T Consensus 80 ~~~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~ 159 (188)
T 3ich_A 80 TRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKT 159 (188)
T ss_dssp TTSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCB
T ss_pred cCCCCCCCccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCc
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999995555
Q ss_pred CCCCCCCcceEEeeeeee--cCCCCCcC
Q 027477 197 TYSGKPRKKVTIADSGEI--PKNKWDEE 222 (223)
Q Consensus 197 ~~~~~P~~~i~I~~cg~l--~~~~~~~~ 222 (223)
+.+++|.++|+|.+||++ ++||+|++
T Consensus 160 ~~~~~P~~~v~I~~~~~l~~~~Pf~~~~ 187 (188)
T 3ich_A 160 DSRDKPLKDVIIADCGKIEVEKPFAIAK 187 (188)
T ss_dssp CTTSCBSSCEEEEEEEEEEEEEEEECCC
T ss_pred CCCCeECCCEEEEEeEEEecCCCCCCCC
Confidence 567799999999999999 88888875
No 4
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=2.4e-54 Score=345.31 Aligned_cols=169 Identities=51% Similarity=0.979 Sum_probs=159.2
Q ss_pred ccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCC
Q 027477 44 ITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKG 123 (223)
Q Consensus 44 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 123 (223)
.+++||||+.+++++.|+|+||||++.||+||+||++||++. +++..+++++|+|+.||||+|+|||||||+..+++.+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 80 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG 80 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence 467999999999999999999999999999999999999864 5656677778999999999999999999998788999
Q ss_pred CCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCC
Q 027477 124 SDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPR 203 (223)
Q Consensus 124 ~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~ 203 (223)
+.++|+..|++|++.++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+ ..++.+++|.
T Consensus 81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~-~~~t~~~~P~ 159 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREME-KEGAKSGYVK 159 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHH-TTCCTTCCCS
T ss_pred CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHH-hCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 6666889999
Q ss_pred cceEEeeeeee
Q 027477 204 KKVTIADSGEI 214 (223)
Q Consensus 204 ~~i~I~~cg~l 214 (223)
++|+|.+||+|
T Consensus 160 ~~v~I~~cG~l 170 (170)
T 1qng_A 160 RSVVITDCGEL 170 (170)
T ss_dssp SCEEEEEEEEC
T ss_pred CCeEEEeceeC
Confidence 99999999986
No 5
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=5.1e-54 Score=345.89 Aligned_cols=171 Identities=51% Similarity=0.888 Sum_probs=159.9
Q ss_pred ccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCC-CCCcccccCCceeEeeeCcEEEecccccCCCC
Q 027477 44 ITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGA-SGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGK 122 (223)
Q Consensus 44 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~-~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~ 122 (223)
.+++||||+.+++|+.|+|+||||++.||+||+||++||++.++.+. .++..+|+|+.||||+|+|||||||+..+++.
T Consensus 8 ~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 87 (179)
T 2wfi_A 8 QRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGR 87 (179)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCC
Confidence 47799999999999999999999999999999999999998877653 35567999999999999999999999878899
Q ss_pred CCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCC
Q 027477 123 GSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKP 202 (223)
Q Consensus 123 ~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P 202 (223)
++.++|+..|++|++.++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+....+.+++|
T Consensus 88 gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P 167 (179)
T 2wfi_A 88 GGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKP 167 (179)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCB
T ss_pred CCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999995555677999
Q ss_pred CcceEEeeeeee
Q 027477 203 RKKVTIADSGEI 214 (223)
Q Consensus 203 ~~~i~I~~cg~l 214 (223)
.++|+|.+||+|
T Consensus 168 ~~~v~I~~~G~l 179 (179)
T 2wfi_A 168 FAEVRILSCGEL 179 (179)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEeCeeC
Confidence 999999999986
No 6
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=4.8e-54 Score=347.50 Aligned_cols=171 Identities=56% Similarity=0.979 Sum_probs=160.6
Q ss_pred ccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCC
Q 027477 42 FEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDG 121 (223)
Q Consensus 42 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~ 121 (223)
...+++||||+.+++++.|+|+||||++.||+||+||++||++.+|++..+++++|+|+.||||+|+|||||||+..+++
T Consensus 16 ~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G 95 (186)
T 2poy_A 16 FQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDG 95 (186)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred cCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCC
Confidence 45678999999999999999999999999999999999999987788778888899999999999999999999988889
Q ss_pred CCCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCC
Q 027477 122 KGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGK 201 (223)
Q Consensus 122 ~~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~ 201 (223)
.++.++|+..|++|++.++|+++|+||||+.+|++++|||||++.+.|+||++|+|||+|++|||||++|+ ..++.+++
T Consensus 96 ~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~-~~~t~~~~ 174 (186)
T 2poy_A 96 TGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIE-KCGSQNGK 174 (186)
T ss_dssp SCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHH-HTCCTTSC
T ss_pred CCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHH-hCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 66678899
Q ss_pred CCcceEEeeeee
Q 027477 202 PRKKVTIADSGE 213 (223)
Q Consensus 202 P~~~i~I~~cg~ 213 (223)
|.++|+|.+||+
T Consensus 175 P~~~v~I~~cG~ 186 (186)
T 2poy_A 175 PTKSVCITASGV 186 (186)
T ss_dssp CSSCEEEEEEEC
T ss_pred CCCCEEEEeCCC
Confidence 999999999995
No 7
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-53 Score=347.20 Aligned_cols=175 Identities=46% Similarity=0.812 Sum_probs=160.8
Q ss_pred ccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCC-CCCcccccCCceeEeeeCcEEEecccccCC
Q 027477 42 FEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGA-SGKPLHFKGKPFHRIVSGFVIQGGDIVRGD 120 (223)
Q Consensus 42 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~-~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~ 120 (223)
...+++||||++++++++|+|+||||++.||+||+||++||++.++++. .++..+|+|+.||||+|+|||||||+..++
T Consensus 16 ~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~ 95 (192)
T 2he9_A 16 PRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGN 95 (192)
T ss_dssp ---CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred ccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCC
Confidence 3567899999999999999999999999999999999999998877653 356679999999999999999999998788
Q ss_pred CCCCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCC
Q 027477 121 GKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSG 200 (223)
Q Consensus 121 ~~~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~ 200 (223)
+.++.++||..|++|++.++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+....+.++
T Consensus 96 G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~ 175 (192)
T 2he9_A 96 GKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAAS 175 (192)
T ss_dssp SSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS
T ss_pred CCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999955556779
Q ss_pred CCCcceEEeeeeeecC
Q 027477 201 KPRKKVTIADSGEIPK 216 (223)
Q Consensus 201 ~P~~~i~I~~cg~l~~ 216 (223)
+|.++|+|.+||+|.+
T Consensus 176 ~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 176 RPYADVRVIDCGVLAT 191 (192)
T ss_dssp CBSSCEEEEEEEECC-
T ss_pred CCcCCeEEEEeEEEcc
Confidence 9999999999999964
No 8
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=2.9e-53 Score=339.29 Aligned_cols=166 Identities=51% Similarity=0.914 Sum_probs=154.9
Q ss_pred ccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCC
Q 027477 42 FEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDG 121 (223)
Q Consensus 42 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~ 121 (223)
+..+++||||+.+++|+.|+|+||||++.||+||+||++||++.+|+ .|+|+.||||+|+|||||||+..++|
T Consensus 7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (172)
T 2cmt_A 7 KRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGF-------GYHNCCFHRVIPQFMCQGGDFVKGDG 79 (172)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSC-------SSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCc-------eECCCEEEEEECCCEEEcCCccCCCC
Confidence 34578999999999999999999999999999999999999975443 29999999999999999999988889
Q ss_pred CCCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCC
Q 027477 122 KGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGK 201 (223)
Q Consensus 122 ~~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~ 201 (223)
.++.++|+..|++|++.++|+++|+||||+++|++++|||||++.++++||++|+|||+|++|||||++|+ ..++.+++
T Consensus 80 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~-~~~~~~~~ 158 (172)
T 2cmt_A 80 TGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKME-SVGSKSGK 158 (172)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGG-GGCCTTCC
T ss_pred CCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHH-hCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 67778899
Q ss_pred CCcceEEeeeeeec
Q 027477 202 PRKKVTIADSGEIP 215 (223)
Q Consensus 202 P~~~i~I~~cg~l~ 215 (223)
|.++|+|.+||+|.
T Consensus 159 P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 159 VKEPVIISRCGELI 172 (172)
T ss_dssp CSSCEEEEEEEEEC
T ss_pred CCCCEEEEEeEeEC
Confidence 99999999999984
No 9
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=4.8e-53 Score=338.51 Aligned_cols=165 Identities=53% Similarity=0.923 Sum_probs=155.0
Q ss_pred cccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCC
Q 027477 43 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGK 122 (223)
Q Consensus 43 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~ 122 (223)
..+++||||+.+++|+.|+|+||||++.||+||+||++||++.+++ +|+|+.||||+|+|||||||+..+++.
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 81 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGF-------GFKGSSFHRIIPQFMCQGGDFTNHNGT 81 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSC-------CSTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCc-------eecCCEEEEeeCCCEEEeCCcCCCCCC
Confidence 3467999999999999999999999999999999999999866553 399999999999999999999888899
Q ss_pred CCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCC
Q 027477 123 GSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKP 202 (223)
Q Consensus 123 ~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P 202 (223)
++.++|+..|++|++.++|+.+|+||||+.+|++++|||||++.+.++||++|+|||+|++|||||++|+ ..++.+++|
T Consensus 82 gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~-~~~~~~~~P 160 (173)
T 2r99_A 82 GGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKP 160 (173)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHH-TTCCTTCCC
T ss_pred CCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHH-hCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 777788999
Q ss_pred CcceEEeeeeeec
Q 027477 203 RKKVTIADSGEIP 215 (223)
Q Consensus 203 ~~~i~I~~cg~l~ 215 (223)
.++|+|.+||+|.
T Consensus 161 ~~~v~I~~cG~l~ 173 (173)
T 2r99_A 161 KQKVIIADCGEYV 173 (173)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCCeEEEEeeeEC
Confidence 9999999999974
No 10
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2e-53 Score=344.41 Aligned_cols=169 Identities=57% Similarity=0.977 Sum_probs=159.4
Q ss_pred ccccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccC
Q 027477 40 DVFEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRG 119 (223)
Q Consensus 40 ~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~ 119 (223)
.+|.++++||||+++++++.|+|+||||++.||+||+||++||++++|+ +|+|+.||||+++|||||||+..+
T Consensus 7 ~~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~ 79 (185)
T 4fru_A 7 KGPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGF-------GYKDSKFHRVIKDFMIQGGDFTRG 79 (185)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSC-------CSTTCBCCEEETTTEEEECCTTTS
T ss_pred CCCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCC-------eEcCCEEEEeeCCCeEEECCCCCC
Confidence 4588999999999999999999999999999999999999999986553 599999999999999999999888
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCC
Q 027477 120 DGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYS 199 (223)
Q Consensus 120 ~~~~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~ 199 (223)
++.++.++|+..+++|++.++|+++|+||||+.+|++++|||||++++.++||++|+|||+|++|||||++|+....+.+
T Consensus 80 ~g~gg~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~ 159 (185)
T 4fru_A 80 DGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGR 159 (185)
T ss_dssp SSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTT
T ss_pred CCCCCccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999995555567
Q ss_pred CCCCcceEEeeeeeec
Q 027477 200 GKPRKKVTIADSGEIP 215 (223)
Q Consensus 200 ~~P~~~i~I~~cg~l~ 215 (223)
++|.++|+|.+||++.
T Consensus 160 ~~P~~~v~I~~~g~l~ 175 (185)
T 4fru_A 160 DKPLKDVTIADCGKIE 175 (185)
T ss_dssp SCBSSCEEEEEEEEEE
T ss_pred CcCCCCEEEEEceEEe
Confidence 9999999999999985
No 11
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=3.6e-53 Score=338.48 Aligned_cols=166 Identities=54% Similarity=0.935 Sum_probs=154.8
Q ss_pred ccccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCccc-ccCCceeEeeeCcEEEeccccc
Q 027477 40 DVFEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLH-FKGKPFHRIVSGFVIQGGDIVR 118 (223)
Q Consensus 40 ~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~-Y~g~~f~ri~~~~~iq~Gd~~~ 118 (223)
..|..+++||||+.+++++.|+|+||||++.||+||+||++||++.++ + |+|+.||||+|+|||||||+..
T Consensus 6 ~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~ 77 (172)
T 2haq_A 6 HEPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHG--------FGYKDSIFHRVIQNFMIQGGDFTN 77 (172)
T ss_dssp -CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBCCEEETTTEEEECCTTT
T ss_pred CCCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCC--------cccCCCEEEEEECCCEEecCCccC
Confidence 357788999999999999999999999999999999999999976554 5 9999999999999999999777
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCC
Q 027477 119 GDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTY 198 (223)
Q Consensus 119 ~~~~~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~ 198 (223)
+++.++.++||..+++|++.++|. +|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|+....+.
T Consensus 78 ~~g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~ 156 (172)
T 2haq_A 78 FDGTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNS 156 (172)
T ss_dssp SSSSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCG
T ss_pred CCCCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCC
Confidence 889999999999999999999999 9999999999999999999999999999999999999999999999999555556
Q ss_pred CCCCCcceEEeeeeee
Q 027477 199 SGKPRKKVTIADSGEI 214 (223)
Q Consensus 199 ~~~P~~~i~I~~cg~l 214 (223)
+++|.++|+|.+||+|
T Consensus 157 ~~~P~~~v~I~~~g~l 172 (172)
T 2haq_A 157 HDRPVKPVKIVASGEL 172 (172)
T ss_dssp GGCBSSCEEEEEEEEC
T ss_pred CCcCCCCeEEEEeEEC
Confidence 6799999999999986
No 12
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=6.4e-53 Score=335.51 Aligned_cols=162 Identities=57% Similarity=1.018 Sum_probs=153.8
Q ss_pred cceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCccc-ccCCceeEeeeCcEEEecccccCCCCC
Q 027477 45 THRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLH-FKGKPFHRIVSGFVIQGGDIVRGDGKG 123 (223)
Q Consensus 45 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 123 (223)
+++||||+.+++++.|+|+||||++.||+||+||++||++.++ + |+|+.||||+|+|||||||+..+++.+
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g 74 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKG--------FGYKGSTFHRVIPSFMCQAGDFTNHNGTG 74 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCC--------ccCcCCEEEEEECCCEEEeCCccCCCCCC
Confidence 5799999999999999999999999999999999999996544 5 999999999999999999998788999
Q ss_pred CCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCC
Q 027477 124 SDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPR 203 (223)
Q Consensus 124 ~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~ 203 (223)
+.++|+..|++|++.++|+++|+||||+.+|++++|||||++.+.|+||++|+|||+|++|||||++|+ ..++.+++|.
T Consensus 75 g~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~-~~~~~~~~P~ 153 (165)
T 2z6w_A 75 GKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIE-SFGSKSGRTS 153 (165)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHH-HTCCTTSCCS
T ss_pred CCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHH-hCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 6667899999
Q ss_pred cceEEeeeeeec
Q 027477 204 KKVTIADSGEIP 215 (223)
Q Consensus 204 ~~i~I~~cg~l~ 215 (223)
++|+|.+||+|.
T Consensus 154 ~~v~I~~~g~l~ 165 (165)
T 2z6w_A 154 KKIVITDCGQLS 165 (165)
T ss_dssp SCEEEEEEEECC
T ss_pred CcEEEEEeEEEC
Confidence 999999999983
No 13
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=8.5e-53 Score=334.73 Aligned_cols=163 Identities=50% Similarity=0.943 Sum_probs=154.0
Q ss_pred cceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCC
Q 027477 45 THRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGS 124 (223)
Q Consensus 45 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 124 (223)
+++|||||.+++|+.|+|+||||++.||+||+||++||++++++ .|+|+.||||+|+|+|||||+..+++.++
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~-------~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg 74 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGF-------GYKDSIFHRVIPQFMLQGGDFTRHNGTGG 74 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSC-------SSTTCBEEEEETTTEEEECCTTTSSSSCC
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCC-------cccCCEEEEEECCCeEEeCCCCCCCCCCC
Confidence 46899999999999999999999999999999999999976553 29999999999999999999878889999
Q ss_pred CCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCCc
Q 027477 125 DSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRK 204 (223)
Q Consensus 125 ~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~~ 204 (223)
.++|+..+++|++.++|+++|+||||+.+|++++|||||++++.|+||++|+|||+|++|||||++|+ ..++.+++|.+
T Consensus 75 ~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~-~~~~~~~~P~~ 153 (164)
T 3pmp_A 75 KSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVE-GKGSASGKTNA 153 (164)
T ss_dssp CBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHH-TTCCTTCCCSS
T ss_pred cccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHH-hCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 67777899999
Q ss_pred ceEEeeeeeec
Q 027477 205 KVTIADSGEIP 215 (223)
Q Consensus 205 ~i~I~~cg~l~ 215 (223)
+|+|.+||+|.
T Consensus 154 ~v~I~~cg~l~ 164 (164)
T 3pmp_A 154 TIKITDCGTVA 164 (164)
T ss_dssp CEEEEEEEEC-
T ss_pred CEEEEeCeEEC
Confidence 99999999983
No 14
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=7.4e-53 Score=338.55 Aligned_cols=169 Identities=51% Similarity=0.933 Sum_probs=157.4
Q ss_pred ccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCC
Q 027477 44 ITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKG 123 (223)
Q Consensus 44 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 123 (223)
.+++||||+.+++|+.|+|+||||++.||+||+||++||+++.+. .+++.+|+|+.||||+|+|||||||+..+++.+
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 86 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK--DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTG 86 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE--TTEECSSTTCBCCEEETTTEEEECCTTTSSSCC
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC--cCccceECCCEEEEEECCCEEEcCCcccCCCCC
Confidence 467999999999999999999999999999999999999987543 345556999999999999999999998888999
Q ss_pred CCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCC
Q 027477 124 SDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPR 203 (223)
Q Consensus 124 ~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~ 203 (223)
+.++|+..|++|++.++|+++|+||||+.+|++++|||||+++++|+||++|+|||+|++|||||++|+....+.+++|.
T Consensus 87 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~ 166 (177)
T 1mzw_A 87 VASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPK 166 (177)
T ss_dssp CCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBS
T ss_pred CCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999955555789999
Q ss_pred cceEEeeeeee
Q 027477 204 KKVTIADSGEI 214 (223)
Q Consensus 204 ~~i~I~~cg~l 214 (223)
++|+|.+||+|
T Consensus 167 ~~v~I~~cG~l 177 (177)
T 1mzw_A 167 LPVVISQCGEM 177 (177)
T ss_dssp SCEEEEEEEEC
T ss_pred CCEEEEeceeC
Confidence 99999999986
No 15
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=1.2e-52 Score=339.06 Aligned_cols=168 Identities=52% Similarity=0.915 Sum_probs=156.4
Q ss_pred ccccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccC
Q 027477 40 DVFEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRG 119 (223)
Q Consensus 40 ~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~ 119 (223)
+.+..+++||||+++++++.|+|+||||++.||+||+||++||++++|+ .|+|+.||||+++|||||||+..+
T Consensus 17 ~~~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~ 89 (184)
T 3rdd_A 17 FQGMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGF-------GYKGSCFHRIIPGFMCQGGDFTRH 89 (184)
T ss_dssp ----CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSC-------SSTTCBCCEEETTTEEEECCTTTS
T ss_pred cccCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCc-------ccCCCEEEEccCCcEEEeCCCCCC
Confidence 3456788999999999999999999999999999999999999987553 299999999999999999998888
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCC
Q 027477 120 DGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYS 199 (223)
Q Consensus 120 ~~~~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~ 199 (223)
++.++.++|+..+++|++.++|+++|+||||+.+|++++|||||++++.++||++|+|||+|++|||||++|+ ..++.+
T Consensus 90 ~g~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~-~~~~~~ 168 (184)
T 3rdd_A 90 NGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME-RFGSRN 168 (184)
T ss_dssp SSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHH-TTCCTT
T ss_pred CCCCCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHH-hcCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999 777889
Q ss_pred CCCCcceEEeeeeeec
Q 027477 200 GKPRKKVTIADSGEIP 215 (223)
Q Consensus 200 ~~P~~~i~I~~cg~l~ 215 (223)
++|.++|+|.+||+|+
T Consensus 169 g~P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 169 GKTSKKITIADCGQLE 184 (184)
T ss_dssp SCCSSCEEEEEEEECC
T ss_pred CCCcCCeEEEeCeEEC
Confidence 9999999999999984
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=2.6e-51 Score=333.50 Aligned_cols=166 Identities=50% Similarity=0.904 Sum_probs=155.6
Q ss_pred cccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCC
Q 027477 43 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGK 122 (223)
Q Consensus 43 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~ 122 (223)
..+++||||+.+++|+.|+|+||||++.||+||+||++||++++++ .|+|+.||||+++|+|||||+..+++.
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 97 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGE-------GYKGSTFHRIIPGFMVQGGDYTAHNGT 97 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTS-------SSTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCC-------cccCCEEEEEeCCCEEEeCCCCCCCCc
Confidence 3457899999999999999999999999999999999999977553 399999999999999999998888899
Q ss_pred CCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCC
Q 027477 123 GSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKP 202 (223)
Q Consensus 123 ~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P 202 (223)
++.++|+..+++|++.++|+++|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|+ ..++.+++|
T Consensus 98 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~-~~~t~~g~P 176 (193)
T 3k2c_A 98 GGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIA-KYGSESGQV 176 (193)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHH-TTCCTTCCC
T ss_pred CCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHH-hcCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 777778999
Q ss_pred C--cceEEeeeeeecC
Q 027477 203 R--KKVTIADSGEIPK 216 (223)
Q Consensus 203 ~--~~i~I~~cg~l~~ 216 (223)
. ++|+|.+||+|..
T Consensus 177 ~~~~~v~I~~cG~l~~ 192 (193)
T 3k2c_A 177 KKGYRIEIRDCGVLGS 192 (193)
T ss_dssp CTTCCEEEEEEEECC-
T ss_pred ccCccEEEEEceEeCC
Confidence 9 9999999999973
No 17
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.8e-51 Score=341.26 Aligned_cols=169 Identities=44% Similarity=0.817 Sum_probs=157.4
Q ss_pred ccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCC
Q 027477 44 ITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKG 123 (223)
Q Consensus 44 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 123 (223)
.+++||||+.+++++.|+|+||||++.||+||+||++||+++++.+ +++++|+|+.||||+|+|||||||+..+++.+
T Consensus 58 ~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~--g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~G 135 (229)
T 1z81_A 58 SNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN--NLPVGYKNTIFHRVIKEFMIQGGDFINHNGSG 135 (229)
T ss_dssp TCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS--SSBCSSTTEECCEEETTTEEEECCTTTSSSCC
T ss_pred CCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc--CCCceECCCEEEEEeCCCEEEcCCCcCCCCCC
Confidence 4679999999999999999999999999999999999999876543 56678999999999999999999998888999
Q ss_pred CCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEE--eCHHHHHHHhcCCCCCC-C
Q 027477 124 SDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVI--QGMDTVYAIEGGAGTYS-G 200 (223)
Q Consensus 124 ~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi--~G~~vl~~I~~~~~~~~-~ 200 (223)
+.++|+..|++|++.++|+++|+||||+.+|++++|||||++.+.++||++|+|||+|+ +|||||++|+....+.+ +
T Consensus 136 g~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~ 215 (229)
T 1z81_A 136 SLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIY 215 (229)
T ss_dssp CCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTC
T ss_pred CCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 99999999995555554 8
Q ss_pred CCCcceEEeeeeee
Q 027477 201 KPRKKVTIADSGEI 214 (223)
Q Consensus 201 ~P~~~i~I~~cg~l 214 (223)
+|.++|+|.+||+|
T Consensus 216 ~P~~~V~I~~cG~l 229 (229)
T 1z81_A 216 KPKIPINVVECGEL 229 (229)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred CCCCCeEEEeCeeC
Confidence 99999999999986
No 18
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=1.9e-51 Score=328.91 Aligned_cols=162 Identities=48% Similarity=0.923 Sum_probs=120.3
Q ss_pred ccceEEEEEEeC--c---eeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEeccccc
Q 027477 44 ITHRVYLDVDIE--E---QRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVR 118 (223)
Q Consensus 44 ~~~~v~~di~i~--~---t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~ 118 (223)
+| +|||||.++ + |++|+|+||||++.||+||+||++||++.+|+ .|+|+.||||+|+|||||||+..
T Consensus 2 it-~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~-------~Y~g~~fhRvi~~f~iQgGd~~~ 73 (172)
T 2c3b_A 2 MS-QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGE-------GYRESTFHRIIPNFMIQGGDFTR 73 (172)
T ss_dssp CC-CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTT-------SSTTCBCCEEETTTEEEECC---
T ss_pred ce-EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCc-------ccCCCEEEEEeCCCEEEeCCcCC
Confidence 56 899999998 4 56699999999999999999999999976553 19999999999999999999767
Q ss_pred CCCCCCCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEe--CHHHHHHHhcCCC
Q 027477 119 GDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQ--GMDTVYAIEGGAG 196 (223)
Q Consensus 119 ~~~~~~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~--G~~vl~~I~~~~~ 196 (223)
+++.++.++|+..|++|++.++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++ |||||++|+ ..+
T Consensus 74 ~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~-~~~ 152 (172)
T 2c3b_A 74 GNGTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIE-ALG 152 (172)
T ss_dssp -------------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHH-TTC
T ss_pred CCCCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHH-hCC
Confidence 88899999999999999989999999999999999999999999999999999999999999999 999999999 555
Q ss_pred CCCC--CCCcceEEeeeeee
Q 027477 197 TYSG--KPRKKVTIADSGEI 214 (223)
Q Consensus 197 ~~~~--~P~~~i~I~~cg~l 214 (223)
+..+ +|.++|+|.+||+|
T Consensus 153 t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 153 SSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp CTTSCCCSSSCCEEEEEEEC
T ss_pred CCCCCccCCCCeEEEeCeeC
Confidence 5444 99999999999986
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=5.7e-51 Score=340.15 Aligned_cols=180 Identities=27% Similarity=0.452 Sum_probs=154.1
Q ss_pred ccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCC------C----CCcccccCCceeEeeeCcEE
Q 027477 42 FEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGA------S----GKPLHFKGKPFHRIVSGFVI 111 (223)
Q Consensus 42 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~------~----~~~~~Y~g~~f~ri~~~~~i 111 (223)
...+++||||+.+++|+.|+|+||||++.||+||+||++||++++.|.. . +++..|+|+.||||+++|||
T Consensus 11 ~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~Fmi 90 (234)
T 2ose_A 11 SGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYI 90 (234)
T ss_dssp CCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEE
T ss_pred CCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEE
Confidence 4457899999999999999999999999999999999999997632211 1 22234999999999999999
Q ss_pred EecccccCCCCCCCCCCCCC-----CCCCCcccccCCCceEEEec----cCCCCCcceEEEEcCC------CCCCCCCCc
Q 027477 112 QGGDIVRGDGKGSDSIYGGT-----FPDENFKIKHSHAGVVSMVN----SGPDSNGSQFFITTVK------ASWLDGEHV 176 (223)
Q Consensus 112 q~Gd~~~~~~~~~~~~~~~~-----~~~e~~~~~h~~~G~lsma~----~~~~~~~sqFfItl~~------~~~ld~~~~ 176 (223)
||||+..++|.++.++||.. |+ ++.++|+++|+||||+ .+|++++|||||++++ .++||++|+
T Consensus 91 QgGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~t 168 (234)
T 2ose_A 91 VSGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQV 168 (234)
T ss_dssp EECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSE
T ss_pred EcCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCee
Confidence 99997778899999999887 66 4688999999999999 8999999999999999 899999999
Q ss_pred EEEEEEeCHHHHHHHhcCCCCCCCCCCcceEEeeeeeecCCCCCcCC
Q 027477 177 VFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEIPKNKWDEER 223 (223)
Q Consensus 177 VFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~cg~l~~~~~~~~~ 223 (223)
|||+|++|||||++|+....+.+++|.++|+|.+|+++.++++++++
T Consensus 169 VFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~p~~~~~k 215 (234)
T 2ose_A 169 VIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLDSSQAQRK 215 (234)
T ss_dssp EEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCCHHHHCC-
T ss_pred EEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecCCcccccc
Confidence 99999999999999996666667999999999999999998877653
No 20
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=2.4e-50 Score=325.78 Aligned_cols=155 Identities=39% Similarity=0.651 Sum_probs=142.7
Q ss_pred eeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCCCCCCCCCCCCCC
Q 027477 57 QRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDEN 136 (223)
Q Consensus 57 t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e~ 136 (223)
|+.|+|+||||++.||+||+||++||+.+ +|+|+.||||+|+|||||||+. +++.++.++||..+++|.
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 91 (185)
T 2poe_A 23 TNYGDLKFELFCSQCPKACKNFLALSASG----------YYKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDEI 91 (185)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCCC
T ss_pred ecCccEEEEEeCCCCcHHHHHHHHHhccC----------CCCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCcccccc
Confidence 78999999999999999999999999987 8999999999999999999986 788889999999999997
Q ss_pred -cccccCCCceEEEeccC----CCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCCcceEEeee
Q 027477 137 -FKIKHSHAGVVSMVNSG----PDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADS 211 (223)
Q Consensus 137 -~~~~h~~~G~lsma~~~----~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~c 211 (223)
..++|+++|+||||+.+ |++++|||||+++++|+||++|+|||+|++||+||++|+....+.+++|.++|+|.+|
T Consensus 92 ~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~ 171 (185)
T 2poe_A 92 YPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDI 171 (185)
T ss_dssp CTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEE
T ss_pred cCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEE
Confidence 68899999999999998 9999999999999999999999999999999999999996666677999999999999
Q ss_pred eeecCCCCCcC
Q 027477 212 GEIPKNKWDEE 222 (223)
Q Consensus 212 g~l~~~~~~~~ 222 (223)
+++.+||+|+|
T Consensus 172 ~i~~dPf~d~~ 182 (185)
T 2poe_A 172 VIHSNPIADQE 182 (185)
T ss_dssp EEECCC-----
T ss_pred EEECCCCCCcc
Confidence 99999999986
No 21
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.7e-49 Score=314.66 Aligned_cols=154 Identities=42% Similarity=0.641 Sum_probs=143.7
Q ss_pred ceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCCCCCCCCCCCCC
Q 027477 56 EQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDE 135 (223)
Q Consensus 56 ~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e 135 (223)
+|+.|+|+||||++.||+||+||++||+++ +|+|+.||||+|+|+|||||+. +++.++.++|+..+++|
T Consensus 6 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE 74 (161)
T 2ok3_A 6 HTDVGDIKIEVFCERTPKTCENFLALCASN----------YYNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDE 74 (161)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCC
T ss_pred EeCCccEEEEEcCCCCcHHHHHHHHHhhhc----------ccCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCccccc
Confidence 478999999999999999999999999987 8999999999999999999986 77888899999999999
Q ss_pred Cc-ccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCC-CCCCcceEEeeeee
Q 027477 136 NF-KIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYS-GKPRKKVTIADSGE 213 (223)
Q Consensus 136 ~~-~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~-~~P~~~i~I~~cg~ 213 (223)
.. .++|+++|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|+....+.+ ++|.++|+|.+|++
T Consensus 75 ~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i 154 (161)
T 2ok3_A 75 YSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154 (161)
T ss_dssp CCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEE
T ss_pred cCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEE
Confidence 76 68899999999999999999999999999999999999999999999999999995555555 89999999999999
Q ss_pred ecCCCCC
Q 027477 214 IPKNKWD 220 (223)
Q Consensus 214 l~~~~~~ 220 (223)
+.+||+|
T Consensus 155 ~~~Pf~d 161 (161)
T 2ok3_A 155 HANPFAQ 161 (161)
T ss_dssp ECCSCC-
T ss_pred ecCCCCC
Confidence 9999986
No 22
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2.7e-49 Score=321.78 Aligned_cols=156 Identities=37% Similarity=0.654 Sum_probs=145.8
Q ss_pred ceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCCCCCCCCCCCCC
Q 027477 56 EQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDE 135 (223)
Q Consensus 56 ~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e 135 (223)
.|+.|+|+||||++.||+||+||++||+.+ +|+|+.||||+++|||||||+. +++.++.++||..|++|
T Consensus 25 ~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g----------~Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f~dE 93 (197)
T 1zkc_A 25 HTNKGDLNLELHCDLTPKTCENFIRLCKKH----------YYDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDE 93 (197)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHHTT----------TTTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCBCCC
T ss_pred EeCCccEEEEEcCCCCcHHHHHHHHHHhcC----------CCCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCccccc
Confidence 477999999999999999999999999987 8999999999999999999985 78888999999999999
Q ss_pred C-cccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCC-CCCCcceEEeeeee
Q 027477 136 N-FKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYS-GKPRKKVTIADSGE 213 (223)
Q Consensus 136 ~-~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~-~~P~~~i~I~~cg~ 213 (223)
. ..++|+.+|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|+....+.+ ++|.++|+|.+|++
T Consensus 94 ~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v 173 (197)
T 1zkc_A 94 FRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTV 173 (197)
T ss_dssp CCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEE
T ss_pred cCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEE
Confidence 4 688999999999999999999999999999999999999999999999999999995555555 89999999999999
Q ss_pred ecCCCCCcC
Q 027477 214 IPKNKWDEE 222 (223)
Q Consensus 214 l~~~~~~~~ 222 (223)
+.+||+|++
T Consensus 174 ~~dPf~d~~ 182 (197)
T 1zkc_A 174 FVDPYEEAD 182 (197)
T ss_dssp EECTTHHHH
T ss_pred EcCCcccHH
Confidence 999998864
No 23
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=5.2e-49 Score=322.09 Aligned_cols=157 Identities=30% Similarity=0.460 Sum_probs=137.3
Q ss_pred ceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEec-----ccccCCCCCCCCCC--
Q 027477 56 EQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGG-----DIVRGDGKGSDSIY-- 128 (223)
Q Consensus 56 ~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~G-----d~~~~~~~~~~~~~-- 128 (223)
.|+.|+|+||||++.||+||+||++||+.+ +|+|+.||||+++|||||| |+. ++|.++.++|
T Consensus 12 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~g~gg~si~~~ 80 (201)
T 3bo7_A 12 VTTQGSLNIELHADMAPRACDSFLRLCAVK----------YFDDTIFHRCIRNFMIQGGRAELRQPS-KKKEVQQSPRSI 80 (201)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBEEEEETTTEEEECCGGGCCC--------CCSSCC
T ss_pred EeCCCCEEEEEcCCCCcHHHHHHHHHHhcC----------ccCCCEEEEeeCCCEEEcCcccccCCC-CCCCCCcccccc
Confidence 478999999999999999999999999987 8999999999999999999 985 7788889999
Q ss_pred -----CCCCCCCC-cccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCC
Q 027477 129 -----GGTFPDEN-FKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKP 202 (223)
Q Consensus 129 -----~~~~~~e~-~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P 202 (223)
+..|++|. ..++|+.+|+||||+++|++++|||||+++++++||++|+|||+|++|||||++|+....+.+++|
T Consensus 81 ~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P 160 (201)
T 3bo7_A 81 SGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKP 160 (201)
T ss_dssp CSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCB
T ss_pred ccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCc
Confidence 88999994 678899999999999999999999999999999999999999999999999999995555567999
Q ss_pred CcceEEeeeeeecCCCCCcCC
Q 027477 203 RKKVTIADSGEIPKNKWDEER 223 (223)
Q Consensus 203 ~~~i~I~~cg~l~~~~~~~~~ 223 (223)
.++|+|.+|+++.+||+|+++
T Consensus 161 ~~~i~I~~~~v~~dPf~d~~~ 181 (201)
T 3bo7_A 161 LKPPKVEEIIVFKNPFEDARK 181 (201)
T ss_dssp SSCCBEEEEEEEECCC-----
T ss_pred CCCeEEEEEEEEcCCccCHHH
Confidence 999999999999999999864
No 24
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=2.3e-48 Score=345.06 Aligned_cols=172 Identities=56% Similarity=0.986 Sum_probs=161.2
Q ss_pred cceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCC-CCcccccCCceeEeeeCcEEEecccccCCCCC
Q 027477 45 THRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGAS-GKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKG 123 (223)
Q Consensus 45 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~-~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 123 (223)
+++||||+.+++++.|+|+||||++.||+||+||++||++.+|++.. |++.+|+|+.||||+|+|||||||+..++|.+
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 78999999999999999999999999999999999999998777654 66678999999999999999999998889999
Q ss_pred CCCCCCCCCCCCCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCC
Q 027477 124 SDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPR 203 (223)
Q Consensus 124 ~~~~~~~~~~~e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~ 203 (223)
+.++||..|++|++.++|+.+|+||||+.+|++++||||||++++|+||++|+|||+|++||+|+++|+ ...+..++|.
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~-~~~~~~~~P~ 173 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILE-NVEVKGEKPA 173 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHH-TSCEETTEES
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHH-cCCCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 5544449999
Q ss_pred cceEEeeeeeecCC
Q 027477 204 KKVTIADSGEIPKN 217 (223)
Q Consensus 204 ~~i~I~~cg~l~~~ 217 (223)
++|+|.+||++.++
T Consensus 174 ~~v~I~~~g~l~~~ 187 (370)
T 1ihg_A 174 KLCVIAECGELKEG 187 (370)
T ss_dssp SCEEEEEEEEECTT
T ss_pred eeEEEEEEEEeccC
Confidence 99999999999754
No 25
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=5.8e-48 Score=313.93 Aligned_cols=157 Identities=38% Similarity=0.620 Sum_probs=142.0
Q ss_pred cceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCC
Q 027477 45 THRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGS 124 (223)
Q Consensus 45 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 124 (223)
+.+|.+ .|+.|+|+||||++.||+||+||++||+.+ +|+|+.||||+|+|||||||+. +++.++
T Consensus 38 ~~~V~l-----~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g----------~Y~g~~FhRVi~~f~iQgGd~~-~~g~gg 101 (196)
T 2b71_A 38 RGYITI-----YTNLGDFEVELYWYHSPKTCLNFYTLCEMG----------FYDNTIFHRVIPNFVIQGGDPT-GTGKGG 101 (196)
T ss_dssp SCEEEE-----EETTEEEEEEECTTTSHHHHHHHHHHHHTT----------TTTTEEEEEEETTTEEEEEETT-SSSSCC
T ss_pred CcEEEE-----EeCCCCEEEEEeCCCCcHHHHHHHHHhhcC----------CcCCCEEEEEeCCcEEEcCCCC-CCCCCC
Confidence 456766 366999999999999999999999999987 8999999999999999999985 788889
Q ss_pred CCCCCCCCCCCC-cccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCC
Q 027477 125 DSIYGGTFPDEN-FKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPR 203 (223)
Q Consensus 125 ~~~~~~~~~~e~-~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~ 203 (223)
.++||..+++|. ..++|+.+|+||||+.+|++++|||||++++.|+||++|+|||+|++||+||++|+....+.+++|.
T Consensus 102 ~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~ 181 (196)
T 2b71_A 102 KSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPI 181 (196)
T ss_dssp CBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBS
T ss_pred CccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCC
Confidence 999999999995 5789989999999999999999999999999999999999999999999999999955556779999
Q ss_pred cceEEeeeeeecCC
Q 027477 204 KKVTIADSGEIPKN 217 (223)
Q Consensus 204 ~~i~I~~cg~l~~~ 217 (223)
++|+|.+|+++.+|
T Consensus 182 ~~i~I~~~~i~~dP 195 (196)
T 2b71_A 182 FDLKILRTSTAVNA 195 (196)
T ss_dssp SCCEEEEEEC----
T ss_pred CCeEEEEEEEecCC
Confidence 99999999999876
No 26
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=8.9e-48 Score=304.33 Aligned_cols=148 Identities=42% Similarity=0.660 Sum_probs=139.2
Q ss_pred ceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCCCCCCCCCCCCC
Q 027477 56 EQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDE 135 (223)
Q Consensus 56 ~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e 135 (223)
+|+.|+|+||||++.||+||+||++||+.+ +|+|+.||||+|+|||||||+. +++.++.++|+..+++|
T Consensus 11 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE 79 (160)
T 2fu0_A 11 YTTMGDIHISLFYKECKKTVQNFSVHSING----------YYNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNEFEDE 79 (160)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCC
T ss_pred EecCccEEEEEeCCCChHHHHHHHHHhccC----------ccCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCCcccc
Confidence 578999999999999999999999999987 8999999999999999999984 77889999999999999
Q ss_pred Cc-ccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCCcceEEeeeeee
Q 027477 136 NF-KIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEI 214 (223)
Q Consensus 136 ~~-~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~cg~l 214 (223)
.. .++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+....+.+++|.++|+|.+|.++
T Consensus 80 ~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~ 159 (160)
T 2fu0_A 80 FFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKIN 159 (160)
T ss_dssp CBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC
T ss_pred ccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEe
Confidence 88 68999999999999999999999999999999999999999999999999999995555568999999999999875
No 27
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=8e-48 Score=306.30 Aligned_cols=154 Identities=42% Similarity=0.755 Sum_probs=142.2
Q ss_pred cceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCC
Q 027477 45 THRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGS 124 (223)
Q Consensus 45 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 124 (223)
+.+|.+ +|+.|+|+||||++.||+||+||++||+.+ +|+|+.||||+|+|+|||||+. +++.++
T Consensus 11 ~~~v~l-----~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg 74 (166)
T 2x7k_A 11 PPNVYL-----ETSMGIIVLELYWKHAPKTCKNFAELARRG----------YYNGTKFHRIIKDFMIQGGDPT-GTGRGG 74 (166)
T ss_dssp CSEEEE-----EETTEEEEEEECTTTCHHHHHHHHHHHHHT----------TTTTEECCEEETTTEEEECCTT-SSSSCC
T ss_pred CCEEEE-----EeCCCcEEEEEccCCCCHHHHHHHHHHhcC----------CCCCCEEEEEECCCEEEcCCCC-CCCCCC
Confidence 356666 466999999999999999999999999987 8999999999999999999985 778889
Q ss_pred CCCCCCCCCCCCc-ccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCC
Q 027477 125 DSIYGGTFPDENF-KIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPR 203 (223)
Q Consensus 125 ~~~~~~~~~~e~~-~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~ 203 (223)
.++|+..+++|.. .++|.++|+||||+.+|++++|||||+++++++||++|+|||+|++|||||++|+....+.+++|.
T Consensus 75 ~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~ 154 (166)
T 2x7k_A 75 ASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPV 154 (166)
T ss_dssp CCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBS
T ss_pred CccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcC
Confidence 9999999999984 789988999999999999999999999999999999999999999999999999955555668999
Q ss_pred cceEEeeeeee
Q 027477 204 KKVTIADSGEI 214 (223)
Q Consensus 204 ~~i~I~~cg~l 214 (223)
++|+|.+|.++
T Consensus 155 ~~i~I~~~~i~ 165 (166)
T 2x7k_A 155 DDVKIIKAYPS 165 (166)
T ss_dssp SCCEEEEEEEC
T ss_pred CCeEEEEEEEe
Confidence 99999999986
No 28
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=309.89 Aligned_cols=165 Identities=33% Similarity=0.559 Sum_probs=149.1
Q ss_pred cccccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEeccccc
Q 027477 39 EDVFEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVR 118 (223)
Q Consensus 39 ~~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~ 118 (223)
...|+.+.+|++++ ++|+|+||||++.||+||+||++||+.+ +|+|+.||||+|+|||||||+.
T Consensus 18 ~~~~~~~~~V~l~T-----~~G~I~ieL~~~~aP~tv~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~- 81 (185)
T 2hq6_A 18 GSEPPTNGKVLLKT-----TAGDIDIELWSKEAPKACRNFIQLCLEA----------YYDNTIFHRVVPGFIVQGGDPT- 81 (185)
T ss_dssp TCCCCCBCEEEEEE-----TTEEEEEEEBTTTCHHHHHHHHHHHHTT----------TTTTEECCEEETTTEEEECCTT-
T ss_pred ccCCCCCCEEEEEe-----CCccEEEEEeCCCCcHHHHHHHHHhhcC----------ccCCCEEEEEECCCEEEcCCCC-
Confidence 34466778888854 5899999999999999999999999987 8999999999999999999985
Q ss_pred CCCCCCCCCCCCCCCCCCc-ccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHH--HHHhcCC
Q 027477 119 GDGKGSDSIYGGTFPDENF-KIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTV--YAIEGGA 195 (223)
Q Consensus 119 ~~~~~~~~~~~~~~~~e~~-~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl--~~I~~~~ 195 (223)
+++.++.++||..+++|.. .++|+.+|+||||+.++++++|||||+++++++||++|+|||+|+ |++++ ++|+...
T Consensus 82 ~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~ 160 (185)
T 2hq6_A 82 GTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVD 160 (185)
T ss_dssp SSSSCCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSC
T ss_pred CCCCCCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCC
Confidence 7788889999999999986 688999999999999999999999999999999999999999999 88874 6888555
Q ss_pred CCCCCCCCcceEEeeeeeecCCCCC
Q 027477 196 GTYSGKPRKKVTIADSGEIPKNKWD 220 (223)
Q Consensus 196 ~~~~~~P~~~i~I~~cg~l~~~~~~ 220 (223)
.+.+++|.++|+|.+|+++.+||+|
T Consensus 161 ~~~~~~P~~~v~I~~~~v~~~Pf~d 185 (185)
T 2hq6_A 161 IDDDERPHNPHKIKSCEVLFNPFDD 185 (185)
T ss_dssp BCTTSCBSSCCEEEEEEEEECTTC-
T ss_pred cCCCCCCCCCeEEEEEEEeCCCCCC
Confidence 5578999999999999999999986
No 29
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=5.3e-47 Score=307.27 Aligned_cols=164 Identities=37% Similarity=0.572 Sum_probs=142.3
Q ss_pred ccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCC--CC---CcccccCCceeEeeeCcEEEeccc
Q 027477 42 FEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGA--SG---KPLHFKGKPFHRIVSGFVIQGGDI 116 (223)
Q Consensus 42 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~--~~---~~~~Y~g~~f~ri~~~~~iq~Gd~ 116 (223)
|..+.+|.+ +|+.|+|+||||++.||+||+||++||++.+++.. ++ +..+|+|+.||||+|+|||||||+
T Consensus 20 ~~~~~~v~l-----~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~ 94 (191)
T 1w74_A 20 PLATATATL-----HTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDP 94 (191)
T ss_dssp -CCSEEEEE-----EETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCT
T ss_pred CCCCeEEEE-----EecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCC
Confidence 344455555 47799999999999999999999999998877532 11 246899999999999999999997
Q ss_pred ccCCCCCCCCCCCCCCCCCC-cccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEe--CHHHHHHHhc
Q 027477 117 VRGDGKGSDSIYGGTFPDEN-FKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQ--GMDTVYAIEG 193 (223)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~e~-~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~--G~~vl~~I~~ 193 (223)
.+++.++ ++..|++|. ..++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++ ||+||++|+.
T Consensus 95 -~g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~ 170 (191)
T 1w74_A 95 -TGTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISK 170 (191)
T ss_dssp -TSSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHT
T ss_pred -CCCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHc
Confidence 4666665 578899994 68899999999999999999999999999999999999999999999 9999999995
Q ss_pred CCCCCCCCCCcceEEeeeeee
Q 027477 194 GAGTYSGKPRKKVTIADSGEI 214 (223)
Q Consensus 194 ~~~~~~~~P~~~i~I~~cg~l 214 (223)
...+.+++|.++|+|.+|+++
T Consensus 171 ~~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 171 TATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp SCBCTTSCBSSCCEEEEEEEC
T ss_pred CCcCCCCCcCCCeEEEEEEEC
Confidence 555577999999999999984
No 30
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=3e-47 Score=310.85 Aligned_cols=160 Identities=41% Similarity=0.713 Sum_probs=146.3
Q ss_pred cceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCC
Q 027477 45 THRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGS 124 (223)
Q Consensus 45 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 124 (223)
+.+|.| +|++|+|+||||++.||+||+||++||+.+ +|+++.||||+|+||||+||+. +++.++
T Consensus 11 ~~~V~l-----~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g----------~Ydg~~FhRVi~~F~iQgGd~~-~~g~gg 74 (203)
T 2k7n_A 11 PPNVYL-----ETSMGIIVLELYWKHAPKTCKNFAELARRG----------YYNGTKFHRIIKDFMIQGGDPT-GTGRGG 74 (203)
T ss_dssp CSEEEE-----EESSCEEEEEECTTTCTTHHHHHHHHHHHT----------CGGGCEEEEEETTTEEEEECSS-SSSSCC
T ss_pred CCEEEE-----EeCCCcEEEEEccCCCcHHHHHHHHHHhcC----------ccCCCEEEEEeCCcEEEcCCCC-CCCCCC
Confidence 356777 456999999999999999999999999987 8999999999999999999985 778888
Q ss_pred CCCCCCCCCCCCc-ccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCC
Q 027477 125 DSIYGGTFPDENF-KIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPR 203 (223)
Q Consensus 125 ~~~~~~~~~~e~~-~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~ 203 (223)
.++|+..|++|.. .++|.++|+||||+.+|++++|||||++.++++||++|+|||+|++|||||++|+....+.+++|.
T Consensus 75 ~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~ 154 (203)
T 2k7n_A 75 ASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPV 154 (203)
T ss_dssp CTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEEC
T ss_pred CccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcC
Confidence 9999999999984 789998999999999999999999999999999999999999999999999999955445668999
Q ss_pred cceEEeeeeeecCCCCC
Q 027477 204 KKVTIADSGEIPKNKWD 220 (223)
Q Consensus 204 ~~i~I~~cg~l~~~~~~ 220 (223)
++|+|.+|+++..+..+
T Consensus 155 ~~V~I~~~~v~~~~~s~ 171 (203)
T 2k7n_A 155 DDVKIIKAYPSGGGGSG 171 (203)
T ss_dssp CCCBEEEEEECCCCCCC
T ss_pred CCeEEEEEEEEecCCCC
Confidence 99999999999877654
No 31
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=5.2e-47 Score=304.03 Aligned_cols=147 Identities=41% Similarity=0.721 Sum_probs=137.7
Q ss_pred ceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCCCCCCCCCCCCC
Q 027477 56 EQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDE 135 (223)
Q Consensus 56 ~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e 135 (223)
+|+.|+|+||||++.||+||+||++||+.+ +|+|+.||||+++|||||||+. +++.++.++||..|++|
T Consensus 27 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE 95 (176)
T 2a2n_A 27 HTSMGDIHTKLFPVECPKTVENFCVHSRNG----------YYNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEFEDE 95 (176)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCC
T ss_pred EecCccEEEEEeCCCChHHHHHHHHHhhcC----------ccCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCccccc
Confidence 578999999999999999999999999987 8999999999999999999984 77888999999999999
Q ss_pred Cc-ccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCC-CCCCCCcceEEeeeee
Q 027477 136 NF-KIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGT-YSGKPRKKVTIADSGE 213 (223)
Q Consensus 136 ~~-~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~-~~~~P~~~i~I~~cg~ 213 (223)
.. .++|+++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+....+ .+++|.++|+|.+|.+
T Consensus 96 ~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 96 FHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp CCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred cccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 88 689999999999999999999999999999999999999999999999999999954444 4899999999999975
No 32
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-46 Score=311.74 Aligned_cols=168 Identities=28% Similarity=0.418 Sum_probs=149.7
Q ss_pred ccccccccceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccc
Q 027477 38 EEDVFEITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIV 117 (223)
Q Consensus 38 ~~~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~ 117 (223)
....|+.+.+|.|+ |++|+|+||||++.||+||+||++||+.+ ||+|+.||||+++|||||||+.
T Consensus 14 ~~~~p~~~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~~g----------~Ydgt~FhRVi~~FmiQgGdp~ 78 (232)
T 3bkp_A 14 LYFQGSTRGKVVLH-----TSLGDLDVELWARECPLACRNFVQLCLEG----------YYVNTIFHRVVKDFIVQGGDPT 78 (232)
T ss_dssp GGCCCSCBCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHHHHT----------TTTTCBEEEEETTTEEEECCTT
T ss_pred ccccCCCCCEEEEE-----ECCCcEEEEEcCCCCcHHHHHHHHHhhcC----------ccCCCEEEEEeCCCEEEcCCCC
Confidence 34446677888884 56899999999999999999999999987 8999999999999999999986
Q ss_pred cCCCCCCCCCC--CCCCCCCCc-ccccCCCceEEEeccCC--------------CCCcceEEEEcCCCCCCCCCCcEEEE
Q 027477 118 RGDGKGSDSIY--GGTFPDENF-KIKHSHAGVVSMVNSGP--------------DSNGSQFFITTVKASWLDGEHVVFGK 180 (223)
Q Consensus 118 ~~~~~~~~~~~--~~~~~~e~~-~~~h~~~G~lsma~~~~--------------~~~~sqFfItl~~~~~ld~~~~VFG~ 180 (223)
+++.++.++| |..|++|.. .++|+.+|+||||+.++ ++++|||||+++++|+||++|+|||+
T Consensus 79 -~~G~Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~ 157 (232)
T 3bkp_A 79 -GTGRGGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGK 157 (232)
T ss_dssp -SSSSCCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEE
T ss_pred -CCCCCCCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEE
Confidence 7888899999 889999986 68899999999999986 69999999999999999999999999
Q ss_pred EEeCHHH--HHHHhcCCCCCCCCCCcceEEeeeeeecCCCCCcC
Q 027477 181 VIQGMDT--VYAIEGGAGTYSGKPRKKVTIADSGEIPKNKWDEE 222 (223)
Q Consensus 181 Vi~G~~v--l~~I~~~~~~~~~~P~~~i~I~~cg~l~~~~~~~~ 222 (223)
|+ ||++ +++|+....+.+++|.++|+|.+|+++.+||+|..
T Consensus 158 Vv-g~~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~dPf~d~~ 200 (232)
T 3bkp_A 158 VT-GHTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPFEDLV 200 (232)
T ss_dssp EC-GGGHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEECCCTTCC
T ss_pred EE-eCchHHHHHHHcCCcCCCCCcCCCeEEEEEEEEcCChhhhh
Confidence 99 7765 88999555557899999999999999999998864
No 33
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=4.5e-45 Score=290.77 Aligned_cols=153 Identities=29% Similarity=0.453 Sum_probs=133.1
Q ss_pred cceEEEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCC
Q 027477 45 THRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGS 124 (223)
Q Consensus 45 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 124 (223)
+++|+|+ |+.|+|+||||++.||+||+||++||+.+ +|+|+.||||+|+|||||||+....+
T Consensus 4 ~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~~~~~--- 65 (166)
T 1v9t_A 4 DPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYVNSG----------FYNNTTFHRVIPGFMIQGGGFTEQMQ--- 65 (166)
T ss_dssp SCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBEEEEETTTEEEESSBCTTCC---
T ss_pred CeEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHhccC----------CCCCCEEEEEECCcEEEcCCcCcCCC---
Confidence 4567774 67999999999999999999999999987 89999999999999999999864332
Q ss_pred CCCCCCCCCCCCcccccCCCceEEEecc-CCCCCcceEEEEcCCCCCCCCC-----CcEEEEEEeCHHHHHHHhcCCCCC
Q 027477 125 DSIYGGTFPDENFKIKHSHAGVVSMVNS-GPDSNGSQFFITTVKASWLDGE-----HVVFGKVIQGMDTVYAIEGGAGTY 198 (223)
Q Consensus 125 ~~~~~~~~~~e~~~~~h~~~G~lsma~~-~~~~~~sqFfItl~~~~~ld~~-----~~VFG~Vi~G~~vl~~I~~~~~~~ 198 (223)
...++.++++|.....|+.+|+||||++ +|++++|||||++.+.++||++ |+|||+|++|||||++|+....+.
T Consensus 66 ~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~ 145 (166)
T 1v9t_A 66 QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHD 145 (166)
T ss_dssp BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEE
T ss_pred CCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCC
Confidence 2345778999987666667999999997 5999999999999999999998 999999999999999999444333
Q ss_pred ----CCCCCcceEEeeeeeec
Q 027477 199 ----SGKPRKKVTIADSGEIP 215 (223)
Q Consensus 199 ----~~~P~~~i~I~~cg~l~ 215 (223)
+++|.++|+|.+|++++
T Consensus 146 ~~~~~~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 146 VGPYQNVPSKPVVILSATVLP 166 (166)
T ss_dssp ETTEEEEESSCCBEEEEEECC
T ss_pred CCccCCCcCCCeEEEEEEEeC
Confidence 47899999999999873
No 34
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=2.8e-45 Score=291.39 Aligned_cols=146 Identities=31% Similarity=0.531 Sum_probs=129.8
Q ss_pred ceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCCCCCCCCCCCCC
Q 027477 56 EQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDE 135 (223)
Q Consensus 56 ~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e 135 (223)
+|+.|+|+||||++.||+||+||++||+.+ +|+|+.||||+|+|||||||+..+. +.++++..+++|
T Consensus 5 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE 71 (164)
T 1lop_A 5 HTNHGDIVIKTFDDKAPETVKNFLDYCREG----------FYNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNE 71 (164)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHHTT----------TTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCC
T ss_pred EeCCCCEEEEEeCCCCcHHHHHHHHHHhcC----------CCCCCEEEEEeCCceEecCCcccCC---CcCCCCCccccc
Confidence 578999999999999999999999999987 8999999999999999999986443 345678899999
Q ss_pred Ccc-cccCCCceEEEecc-CCCCCcceEEEEcCCCCCCCCC--------CcEEEEEEeCHHHHHHHhcCCCCC----CCC
Q 027477 136 NFK-IKHSHAGVVSMVNS-GPDSNGSQFFITTVKASWLDGE--------HVVFGKVIQGMDTVYAIEGGAGTY----SGK 201 (223)
Q Consensus 136 ~~~-~~h~~~G~lsma~~-~~~~~~sqFfItl~~~~~ld~~--------~~VFG~Vi~G~~vl~~I~~~~~~~----~~~ 201 (223)
... ++| .+|+||||++ +|++++|||||++.++++||++ |+|||+|++|||||++|+....+. +++
T Consensus 72 ~~~~l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~ 150 (164)
T 1lop_A 72 ANNGLKN-TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDV 150 (164)
T ss_dssp CCSSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEE
T ss_pred ccccccc-CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCC
Confidence 875 555 6999999975 7999999999999999999998 999999999999999999443332 489
Q ss_pred CCcceEEeeeeeec
Q 027477 202 PRKKVTIADSGEIP 215 (223)
Q Consensus 202 P~~~i~I~~cg~l~ 215 (223)
|.++|+|.+|++++
T Consensus 151 P~~~v~I~~~~v~~ 164 (164)
T 1lop_A 151 PKEDVIIESVTVSE 164 (164)
T ss_dssp ESSCCEEEEEEECC
T ss_pred cCCCeEEEEEEEeC
Confidence 99999999999874
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=2.5e-44 Score=286.83 Aligned_cols=146 Identities=29% Similarity=0.454 Sum_probs=128.5
Q ss_pred ceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCCCCCCCCCCCCC
Q 027477 56 EQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDE 135 (223)
Q Consensus 56 ~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~e 135 (223)
+|+.|+|+||||++.||+||+||++||+.+ +|+|+.||||+++|||||||+..+.+ ...++..+++|
T Consensus 9 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~~~~~~~E 75 (167)
T 3s6m_A 9 HTNHGVIKLELDEAKAPKTVENFLNYVKKG----------HYDGTIFHRVINGFMIQGGGFEPGLK---QKPTDAPIANE 75 (167)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHHT----------TTTTEECCEEETTTEEEESSEETTTE---ECCCCCCBCCC
T ss_pred EeCCceEEEEEeCCCCcHHHHHHHHHhhhc----------ccCCCEeEEecCCcEEEeccccCCCC---CCCCCCccCCc
Confidence 578999999999999999999999999987 89999999999999999999864432 23457788998
Q ss_pred CcccccCCCceEEEec-cCCCCCcceEEEEcCCCCCCCCC--------CcEEEEEEeCHHHHHHHhcCCCCC----CCCC
Q 027477 136 NFKIKHSHAGVVSMVN-SGPDSNGSQFFITTVKASWLDGE--------HVVFGKVIQGMDTVYAIEGGAGTY----SGKP 202 (223)
Q Consensus 136 ~~~~~h~~~G~lsma~-~~~~~~~sqFfItl~~~~~ld~~--------~~VFG~Vi~G~~vl~~I~~~~~~~----~~~P 202 (223)
.....++.+|+||||+ .+|++++|||||++.++++||++ |+|||+|++|||||++|+....+. +++|
T Consensus 76 ~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P 155 (167)
T 3s6m_A 76 ANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVP 155 (167)
T ss_dssp GGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCB
T ss_pred ccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCc
Confidence 7654445799999999 57999999999999999999998 999999999999999999444444 5899
Q ss_pred CcceEEeeeeee
Q 027477 203 RKKVTIADSGEI 214 (223)
Q Consensus 203 ~~~i~I~~cg~l 214 (223)
.++|+|.+|.+|
T Consensus 156 ~~~v~I~~~~il 167 (167)
T 3s6m_A 156 NDDVVIEKAVVV 167 (167)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEEEEEC
Confidence 999999999885
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=1.2e-38 Score=279.82 Aligned_cols=158 Identities=26% Similarity=0.393 Sum_probs=132.0
Q ss_pred hhcccccccccceEEEEEEeC-----ceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCc
Q 027477 35 EEKEEDVFEITHRVYLDVDIE-----EQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGF 109 (223)
Q Consensus 35 ~~~~~~~~~~~~~v~~di~i~-----~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~ 109 (223)
++.....|.++.++++.+.+. .++.|+|+|+||++.||+||+||++||+.+ ||+|+.|||| ++|
T Consensus 158 P~~y~~~P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~G----------fYdGt~FHRV-~gF 226 (369)
T 3rfy_A 158 PEEYRNMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERH----------FYDGMEIQRS-DGF 226 (369)
T ss_dssp CSSCTTSCEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTT----------TTTTEECEEE-EEE
T ss_pred chhcccCccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcC----------CcCCCeeeee-CCe
Confidence 444556678888777777653 235999999999999999999999999987 8999999999 999
Q ss_pred EEEecccccCCCCC---------------------CCCCCCCCCCCCCc-----ccccCCCceEEEecc--CCCCCcceE
Q 027477 110 VIQGGDIVRGDGKG---------------------SDSIYGGTFPDENF-----KIKHSHAGVVSMVNS--GPDSNGSQF 161 (223)
Q Consensus 110 ~iq~Gd~~~~~~~~---------------------~~~~~~~~~~~e~~-----~~~h~~~G~lsma~~--~~~~~~sqF 161 (223)
||||||+. +++.| +.++|+..+++|++ .++|+.+|+||||++ +|++++|||
T Consensus 227 mIQgGDp~-g~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQF 305 (369)
T 3rfy_A 227 VVQTGDPE-GPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQV 305 (369)
T ss_dssp EECCCCCC-CCCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCC
T ss_pred eEecCCCC-CCCCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceE
Confidence 99999985 55444 35677777777754 678999999999997 799999999
Q ss_pred EEEc-------CCCCCCCCCCcEEEEEEeCHHHHHHHhcCCCCCCCCCCcceEEee
Q 027477 162 FITT-------VKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIAD 210 (223)
Q Consensus 162 fItl-------~~~~~ld~~~~VFG~Vi~G~~vl~~I~~~~~~~~~~P~~~i~I~~ 210 (223)
||++ ++.++||++|+|||+|++|||||++|+ .+.....|+|.+
T Consensus 306 FItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdkI~------~GD~I~sv~I~~ 355 (369)
T 3rfy_A 306 FWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLK------VGDVIESIQVVS 355 (369)
T ss_dssp CCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGGCC------TTCEEEEEEEEE
T ss_pred EEEecccccCCCCCcccCCCeeEEEEEecCHHHHHHHh------CCCceEEEEEec
Confidence 9999 468999999999999999999999998 344555566654
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=93.95 E-value=0.4 Score=37.55 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=26.2
Q ss_pred EEEEEeCceeeeeEEEEEeCCCCchhHHHHHHhh
Q 027477 49 YLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALC 82 (223)
Q Consensus 49 ~~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~ 82 (223)
|+.|++..... .++.+|..+.||+||+.|.++-
T Consensus 23 ~i~itl~~~g~-~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 23 YINITLEKRGV-TCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp EEEEEETTTTE-EEEEEECTTTSHHHHHHHHHHC
T ss_pred EEEEEEecCCe-EEEEEEccccChHHHHHHHHhC
Confidence 66777654432 5889999999999999999975
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=89.80 E-value=0.55 Score=35.91 Aligned_cols=105 Identities=20% Similarity=0.233 Sum_probs=59.9
Q ss_pred EEEEeCceeeeeEEEEEeCCCCchhHHHHHHhhhCCCCCCCCCCcccccCCceeEeeeCcEEEecccccCCCCCCCCCCC
Q 027477 50 LDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHFKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYG 129 (223)
Q Consensus 50 ~di~i~~t~~G~i~ieL~~~~aP~~~~nF~~l~~~~~g~~~~~~~~~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 129 (223)
+.|.+++ ..++++|+.+.||+|++.|+++-= +... +.+ .|+-....- .
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~LP-------------l~~~-~~~--------~g~E~y~~l-------p 79 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADALP-------------IKST-ANR--------WGDEIYFTT-------Q 79 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHTCS-------------EEEE-EEE--------ETTEEEECC-------S
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHhCC-------------cEEE-HHh--------hCCcEEEEC-------C
Confidence 3445544 569999999999999999999752 1111 111 111000000 0
Q ss_pred CCCCC-CCcccccCCCceEEEeccCCCCCcceEEEEcCCCCCCCC------CCcEEEEEEeCHHHHHHHh
Q 027477 130 GTFPD-ENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDG------EHVVFGKVIQGMDTVYAIE 192 (223)
Q Consensus 130 ~~~~~-e~~~~~h~~~G~lsma~~~~~~~~sqFfItl~~~~~ld~------~~~VFG~Vi~G~~vl~~I~ 192 (223)
..++. |+. .....+|-|+.-..+. .+.|-.++.|...+ .-.+||+|.+|++.|.++.
T Consensus 80 ~~l~~~en~-~~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 80 VAVEKEENS-KDVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp CCCCCSSCC-BCCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred CCCCCCCCC-cccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 00111 222 2234588888765433 37777777643322 2478999999988777664
No 39
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=34.12 E-value=26 Score=18.02 Aligned_cols=18 Identities=22% Similarity=0.220 Sum_probs=11.6
Q ss_pred eccCCCCCcceEEEEcCC
Q 027477 150 VNSGPDSNGSQFFITTVK 167 (223)
Q Consensus 150 a~~~~~~~~sqFfItl~~ 167 (223)
|......-.|..||||.+
T Consensus 2 a~kpeKR~aSSvFITLap 19 (26)
T 2k9u_B 2 ASKPEKRVASSVFITLAP 19 (26)
T ss_dssp CCCSSSSCEEEEEEEECC
T ss_pred CCcchhheeeeEEEEecC
Confidence 333344556788999965
No 40
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=31.05 E-value=42 Score=24.76 Aligned_cols=45 Identities=22% Similarity=0.344 Sum_probs=31.4
Q ss_pred CCceEEEeccCCCCCcceEEEEcCCCCCCCC------CCcEEEEEEeCHHHHHHHh
Q 027477 143 HAGVVSMVNSGPDSNGSQFFITTVKASWLDG------EHVVFGKVIQGMDTVYAIE 192 (223)
Q Consensus 143 ~~G~lsma~~~~~~~~sqFfItl~~~~~ld~------~~~VFG~Vi~G~~vl~~I~ 192 (223)
..|-|+.-..+. -|-|-.++.|...+ .-.+||+|.+|++.+..+.
T Consensus 74 ~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 74 EIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp CTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred CCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 578887765544 37777777754433 3579999999988877665
No 41
>4i62_A Amino acid ABC transporter, periplasmic amino ACI protein, putative; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases (NIAI niaid; HET: ARG; 1.05A {Streptococcus pneumoniae}
Probab=27.30 E-value=15 Score=28.49 Aligned_cols=12 Identities=25% Similarity=0.617 Sum_probs=5.1
Q ss_pred eEEEEEeCCCCc
Q 027477 61 RIVIGLYGQVVP 72 (223)
Q Consensus 61 ~i~ieL~~~~aP 72 (223)
.|+|...++..|
T Consensus 40 ~l~v~~~~~~~P 51 (269)
T 4i62_A 40 KLVVALNPDFAP 51 (269)
T ss_dssp EEEEEECSCBTT
T ss_pred eEEEEecCCCCC
Confidence 344444444444
No 42
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=24.40 E-value=19 Score=26.10 Aligned_cols=6 Identities=17% Similarity=0.301 Sum_probs=0.0
Q ss_pred HHHHHH
Q 027477 10 RTRYLL 15 (223)
Q Consensus 10 ~~~~~~ 15 (223)
++|+++
T Consensus 2 kk~~~~ 7 (130)
T 2a3m_A 2 RKSLFA 7 (130)
T ss_dssp ------
T ss_pred chhHHH
Confidence 333333
No 43
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=21.44 E-value=35 Score=25.55 Aligned_cols=15 Identities=0% Similarity=0.131 Sum_probs=11.8
Q ss_pred CceeeeeEEEEEeCC
Q 027477 55 EEQRLGRIVIGLYGQ 69 (223)
Q Consensus 55 ~~t~~G~i~ieL~~~ 69 (223)
.+++...|.|+|+..
T Consensus 41 ~G~PA~gv~V~L~~~ 55 (147)
T 4ank_A 41 RGSPAINVAVHVFRK 55 (147)
T ss_dssp TTEECCSCEEEEEEE
T ss_pred CCcCCCCCEEEEEEE
Confidence 467888899999854
Done!