Query 027479
Match_columns 223
No_of_seqs 249 out of 1971
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 17:43:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027479.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027479hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nx6_A 10KDA chaperonin; bacte 100.0 5.2E-37 1.8E-41 236.7 10.0 94 59-152 1-95 (95)
2 1p3h_A 10 kDa chaperonin; beta 100.0 1.6E-36 5.5E-41 235.5 10.9 94 59-152 3-98 (99)
3 1pcq_O Groes protein; chaperon 100.0 2.3E-36 7.8E-41 233.9 10.7 94 59-152 1-96 (97)
4 1we3_O CPN10(groes); chaperoni 100.0 1.6E-36 5.6E-41 235.8 8.2 94 59-152 6-100 (100)
5 1g31_A GP31; chaperone, CO-cha 99.9 2.2E-26 7.4E-31 181.8 1.4 88 59-152 7-111 (111)
6 3nx6_A 10KDA chaperonin; bacte 99.9 8.7E-24 3E-28 162.9 5.6 65 157-221 1-78 (95)
7 1pcq_O Groes protein; chaperon 99.9 2.2E-23 7.6E-28 161.1 6.8 65 157-221 1-79 (97)
8 1p3h_A 10 kDa chaperonin; beta 99.9 3.2E-23 1.1E-27 160.8 7.0 65 157-221 3-81 (99)
9 1we3_O CPN10(groes); chaperoni 99.9 2.1E-23 7.1E-28 162.1 5.0 65 157-221 6-83 (100)
10 1g31_A GP31; chaperone, CO-cha 99.7 1.2E-17 4.1E-22 131.9 2.1 58 157-214 7-77 (111)
11 3uko_A Alcohol dehydrogenase c 79.2 3 0.0001 36.7 5.8 24 94-125 70-93 (378)
12 1wly_A CAAR, 2-haloacrylate re 78.5 2.5 8.6E-05 36.4 5.0 40 94-147 68-109 (333)
13 3goh_A Alcohol dehydrogenase, 77.6 3.2 0.00011 35.4 5.4 41 94-148 66-110 (315)
14 2c0c_A Zinc binding alcohol de 77.2 2.6 8.8E-05 37.0 4.7 40 94-146 91-130 (362)
15 1gu7_A Enoyl-[acyl-carrier-pro 76.7 3.6 0.00012 35.8 5.5 24 94-125 80-103 (364)
16 3qwb_A Probable quinone oxidor 76.0 3.2 0.00011 35.7 4.9 27 94-128 71-97 (334)
17 3jyn_A Quinone oxidoreductase; 75.6 3.7 0.00013 35.2 5.2 41 94-148 65-107 (325)
18 3m6i_A L-arabinitol 4-dehydrog 74.6 4.2 0.00014 35.4 5.4 24 94-125 80-103 (363)
19 4a0s_A Octenoyl-COA reductase/ 74.2 4 0.00014 36.7 5.3 24 94-125 117-140 (447)
20 2lqk_A Transcriptional regulat 75.6 0.7 2.4E-05 32.8 0.0 31 115-145 6-44 (70)
21 2eih_A Alcohol dehydrogenase; 73.2 3.8 0.00013 35.4 4.7 24 94-125 65-88 (343)
22 1zsy_A Mitochondrial 2-enoyl t 73.1 5.2 0.00018 34.8 5.6 25 94-126 92-116 (357)
23 2vn8_A Reticulon-4-interacting 71.9 4.8 0.00016 35.3 5.1 40 94-147 102-145 (375)
24 1qor_A Quinone oxidoreductase; 71.8 4.9 0.00017 34.3 5.1 41 94-147 65-106 (327)
25 2d8a_A PH0655, probable L-thre 70.9 5.7 0.00019 34.4 5.3 24 94-125 69-92 (348)
26 3gms_A Putative NADPH:quinone 70.9 5.1 0.00018 34.6 5.0 42 94-148 70-111 (340)
27 3two_A Mannitol dehydrogenase; 70.6 4.3 0.00015 35.2 4.5 24 94-125 66-89 (348)
28 4dup_A Quinone oxidoreductase; 70.6 5 0.00017 35.0 4.9 42 94-148 93-134 (353)
29 1yb5_A Quinone oxidoreductase; 70.3 5.2 0.00018 35.0 4.9 71 63-147 55-136 (351)
30 2dq4_A L-threonine 3-dehydroge 70.1 6.3 0.00022 34.0 5.4 24 94-125 65-88 (343)
31 3mlq_E Transcription-repair co 70.1 3 0.0001 29.6 2.7 30 115-144 2-39 (71)
32 3fbg_A Putative arginate lyase 68.7 6.7 0.00023 34.0 5.3 42 94-148 67-111 (346)
33 4dvj_A Putative zinc-dependent 68.7 6.3 0.00022 34.6 5.2 73 63-148 50-133 (363)
34 4a27_A Synaptic vesicle membra 68.3 5.9 0.0002 34.4 4.9 42 94-148 68-109 (349)
35 3gaz_A Alcohol dehydrogenase s 66.1 4.5 0.00015 35.1 3.6 45 94-148 71-117 (343)
36 4ej6_A Putative zinc-binding d 66.0 8.4 0.00029 33.9 5.4 54 63-125 45-106 (370)
37 3pi7_A NADH oxidoreductase; gr 65.8 5.6 0.00019 34.4 4.2 42 94-148 87-132 (349)
38 3tqh_A Quinone oxidoreductase; 65.1 7.3 0.00025 33.3 4.7 44 94-150 75-122 (321)
39 3iup_A Putative NADPH:quinone 64.2 7.3 0.00025 34.4 4.7 42 94-148 98-139 (379)
40 2h6e_A ADH-4, D-arabinose 1-de 64.1 9 0.00031 33.0 5.2 23 94-125 67-89 (344)
41 2j8z_A Quinone oxidoreductase; 63.9 9.2 0.00031 33.3 5.2 42 94-147 87-128 (354)
42 3ip1_A Alcohol dehydrogenase, 62.0 8.9 0.0003 34.1 4.9 30 94-125 99-128 (404)
43 3uog_A Alcohol dehydrogenase; 61.0 5.8 0.0002 34.7 3.4 55 62-125 50-114 (363)
44 1f8f_A Benzyl alcohol dehydrog 59.3 5.5 0.00019 34.8 2.9 24 94-125 67-90 (371)
45 4eez_A Alcohol dehydrogenase 1 59.3 5.6 0.00019 34.1 2.9 24 94-125 62-85 (348)
46 4eye_A Probable oxidoreductase 58.3 11 0.00037 32.7 4.6 71 63-148 46-126 (342)
47 2cf5_A Atccad5, CAD, cinnamyl 58.0 6.1 0.00021 34.5 3.0 23 94-124 71-93 (357)
48 1cdo_A Alcohol dehydrogenase; 57.9 6 0.00021 34.6 2.9 24 94-125 70-93 (374)
49 1pl8_A Human sorbitol dehydrog 57.7 6.1 0.00021 34.4 2.9 24 94-125 71-94 (356)
50 3jv7_A ADH-A; dehydrogenase, n 57.4 6.3 0.00022 34.0 2.9 24 94-125 64-87 (345)
51 1yqd_A Sinapyl alcohol dehydro 57.2 6.3 0.00021 34.6 2.9 23 94-124 78-100 (366)
52 1e3j_A NADP(H)-dependent ketos 57.1 6.4 0.00022 34.1 2.9 24 94-125 68-91 (352)
53 1e3i_A Alcohol dehydrogenase, 56.9 6.4 0.00022 34.4 2.9 24 94-125 69-92 (376)
54 2jhf_A Alcohol dehydrogenase E 56.9 6.4 0.00022 34.4 2.9 54 63-125 31-92 (374)
55 2fzw_A Alcohol dehydrogenase c 56.9 6.4 0.00022 34.3 2.9 24 94-125 68-91 (373)
56 1p0f_A NADP-dependent alcohol 56.9 6.4 0.00022 34.4 2.9 24 94-125 70-93 (373)
57 3s2e_A Zinc-containing alcohol 56.5 6.8 0.00023 33.7 3.0 23 94-124 65-87 (340)
58 2hcy_A Alcohol dehydrogenase 1 55.9 6.9 0.00024 33.8 2.9 24 94-125 68-91 (347)
59 3fpc_A NADP-dependent alcohol 55.6 7 0.00024 33.9 2.9 24 94-125 61-84 (352)
60 1piw_A Hypothetical zinc-type 55.5 7 0.00024 34.0 2.9 24 94-124 70-93 (360)
61 1rjw_A ADH-HT, alcohol dehydro 54.5 7.5 0.00026 33.6 2.9 24 94-125 63-86 (339)
62 1kol_A Formaldehyde dehydrogen 54.3 6.8 0.00023 34.6 2.7 23 94-124 69-91 (398)
63 2dph_A Formaldehyde dismutase; 54.2 6.8 0.00023 34.7 2.7 24 94-125 68-91 (398)
64 3krt_A Crotonyl COA reductase; 54.2 7.3 0.00025 35.3 2.9 24 94-125 125-148 (456)
65 1jvb_A NAD(H)-dependent alcoho 53.7 7.3 0.00025 33.7 2.7 23 94-124 70-92 (347)
66 1uuf_A YAHK, zinc-type alcohol 53.5 7.3 0.00025 34.3 2.7 24 94-125 84-107 (369)
67 1h2b_A Alcohol dehydrogenase; 52.3 7.9 0.00027 33.8 2.7 23 94-124 81-103 (359)
68 3slk_A Polyketide synthase ext 49.7 16 0.00054 36.1 4.7 71 63-148 236-312 (795)
69 2wsc_L Photosystem I reaction 46.0 5.6 0.00019 34.2 0.7 49 13-66 16-64 (216)
70 3gqv_A Enoyl reductase; medium 45.5 12 0.0004 32.9 2.7 24 94-125 70-93 (371)
71 3pqh_A Gene product 138; beta- 44.9 49 0.0017 26.2 6.0 38 90-134 15-52 (127)
72 2b5w_A Glucose dehydrogenase; 42.8 13 0.00046 32.2 2.7 22 94-125 65-86 (357)
73 4a2c_A Galactitol-1-phosphate 42.3 15 0.00052 31.3 2.9 25 94-126 61-85 (346)
74 3nx4_A Putative oxidoreductase 40.5 21 0.00071 30.2 3.5 45 94-148 65-110 (324)
75 1vj0_A Alcohol dehydrogenase, 39.8 17 0.00059 31.9 3.0 29 94-125 79-107 (380)
76 2qnk_A 3-hydroxyanthranilate 3 37.6 1.3E+02 0.0045 26.8 8.3 74 93-174 206-279 (286)
77 2k1g_A Lipoprotein SPR; soluti 31.2 15 0.00051 28.9 1.0 35 81-127 45-79 (135)
78 3es4_A Uncharacterized protein 30.6 57 0.002 24.9 4.2 30 102-131 70-100 (116)
79 3k2z_A LEXA repressor; winged 30.1 1.3E+02 0.0043 23.9 6.4 70 114-200 122-193 (196)
80 1kca_A Repressor protein CI; g 28.9 1.2E+02 0.004 22.1 5.6 71 114-199 31-101 (109)
81 2wsc_K Photosystem I reaction 28.3 12 0.00042 29.9 0.0 35 16-51 9-43 (131)
82 1tt7_A YHFP; alcohol dehydroge 25.3 66 0.0023 27.2 4.1 43 94-148 69-114 (330)
83 2l8d_A Lamin-B receptor; DNA b 23.8 70 0.0024 22.7 3.3 17 113-130 7-23 (66)
84 3i4o_A Translation initiation 22.0 1.2E+02 0.004 21.8 4.3 36 146-182 38-75 (79)
85 3v2d_V 50S ribosomal protein L 21.9 1.9E+02 0.0065 21.6 5.6 22 114-135 12-36 (101)
86 1xa0_A Putative NADPH dependen 20.5 62 0.0021 27.3 3.0 45 94-148 68-113 (328)
No 1
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=100.00 E-value=5.2e-37 Score=236.69 Aligned_cols=94 Identities=43% Similarity=0.703 Sum_probs=70.9
Q ss_pred ccccccCCeEEEEeccccccccceEEecCCCCCCCcceEEEEecCceecCCC-eeeecccCCcEEEecCCCceEEEEcCe
Q 027479 59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGA 137 (223)
Q Consensus 59 ~~lkPLgDRVLVk~~e~e~kT~gGIiLP~sa~~K~~~G~VVAVG~G~~~~~~-~vp~~VkvGD~Vlf~ky~G~eV~~dg~ 137 (223)
++|+||+||||||+.++|++|+|||+||+++++||++|+|||||+|+..+++ .+|++||+||+|+|++|+|+||++||+
T Consensus 1 m~i~PL~DRVlVk~~e~e~kT~gGI~LP~~a~eK~~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~dg~ 80 (95)
T 3nx6_A 1 MSIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGV 80 (95)
T ss_dssp -CCCCCTTEEEEEEC-------------------CEEEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEETTE
T ss_pred CCeEEcCCEEEEEEccccccccceEEeCccccCCccccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEECCE
Confidence 5799999999999999999999999999999999999999999999998876 489999999999999999999999999
Q ss_pred eeEEEeccceeeeee
Q 027479 138 NHLILREDDVVGILE 152 (223)
Q Consensus 138 ~y~ilre~DIlaii~ 152 (223)
+|+|+||+||||+++
T Consensus 81 ey~i~re~DILavie 95 (95)
T 3nx6_A 81 EYKVLREDDILAVIG 95 (95)
T ss_dssp EEEEEEGGGEEEECC
T ss_pred EEEEEEHHHEEEEeC
Confidence 999999999999985
No 2
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=100.00 E-value=1.6e-36 Score=235.52 Aligned_cols=94 Identities=43% Similarity=0.763 Sum_probs=90.2
Q ss_pred ccccccCCeEEEEeccccccccceEEecCCCCCCCcceEEEEecCceecCCC--eeeecccCCcEEEecCCCceEEEEcC
Q 027479 59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA--KLDISVKPGTQVIYSKYAGTELEFNG 136 (223)
Q Consensus 59 ~~lkPLgDRVLVk~~e~e~kT~gGIiLP~sa~~K~~~G~VVAVG~G~~~~~~--~vp~~VkvGD~Vlf~ky~G~eV~~dg 136 (223)
++|+||+||||||+.++|++|+|||+||+++++||++|+|||||+|+.++++ .+|++||+||+|+|++|+|+||++||
T Consensus 3 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~dg 82 (99)
T 1p3h_A 3 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNG 82 (99)
T ss_dssp CEEEECTTEEEEEECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEETT
T ss_pred ceeEEeCCEEEEEEccccccccceEEeCcccccCCceEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEECC
Confidence 6899999999999999999999999999999999999999999999987765 48999999999999999999999999
Q ss_pred eeeEEEeccceeeeee
Q 027479 137 ANHLILREDDVVGILE 152 (223)
Q Consensus 137 ~~y~ilre~DIlaii~ 152 (223)
++|+|+||+||||+++
T Consensus 83 eey~i~re~DIlavi~ 98 (99)
T 1p3h_A 83 EEYLILSARDVLAVVS 98 (99)
T ss_dssp EEEEEEEGGGEEEEEE
T ss_pred EEEEEEEhHhEEEEee
Confidence 9999999999999986
No 3
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=100.00 E-value=2.3e-36 Score=233.89 Aligned_cols=94 Identities=39% Similarity=0.647 Sum_probs=90.0
Q ss_pred ccccccCCeEEEEeccccccccceEEecCCCCCCCcceEEEEecCceecCCC-eeeecccCCcEEEecC-CCceEEEEcC
Q 027479 59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSK-YAGTELEFNG 136 (223)
Q Consensus 59 ~~lkPLgDRVLVk~~e~e~kT~gGIiLP~sa~~K~~~G~VVAVG~G~~~~~~-~vp~~VkvGD~Vlf~k-y~G~eV~~dg 136 (223)
++|+||+||||||+.++|++|+|||+||+++++||++|+|||||+|+.++++ .+|++||+||+|+|++ |+|+||++||
T Consensus 1 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~dg 80 (97)
T 1pcq_O 1 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDN 80 (97)
T ss_dssp CEEEECSSEEEEEECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEETT
T ss_pred CCceEcCCEEEEEEccccccccceEEeCcccccCCcccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEECC
Confidence 4799999999999999999999999999999999999999999999987766 4899999999999999 9999999999
Q ss_pred eeeEEEeccceeeeee
Q 027479 137 ANHLILREDDVVGILE 152 (223)
Q Consensus 137 ~~y~ilre~DIlaii~ 152 (223)
++|+|+||+||||+++
T Consensus 81 eey~i~re~DIlavv~ 96 (97)
T 1pcq_O 81 EEVLIMSESDILAIVE 96 (97)
T ss_dssp EEEEEEEGGGEEEEEE
T ss_pred EEEEEEEhHHEEEEec
Confidence 9999999999999987
No 4
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=100.00 E-value=1.6e-36 Score=235.85 Aligned_cols=94 Identities=48% Similarity=0.836 Sum_probs=89.7
Q ss_pred ccccccCCeEEEEeccccccccceEEecCCCCCCCcceEEEEecCceecCCC-eeeecccCCcEEEecCCCceEEEEcCe
Q 027479 59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGA 137 (223)
Q Consensus 59 ~~lkPLgDRVLVk~~e~e~kT~gGIiLP~sa~~K~~~G~VVAVG~G~~~~~~-~vp~~VkvGD~Vlf~ky~G~eV~~dg~ 137 (223)
++|+||+||||||+.++|++|+|||+||+++++||++|+|||||+|+..+++ .+|++||+||+|+|++|+|+||++||+
T Consensus 6 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~dge 85 (100)
T 1we3_O 6 TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGE 85 (100)
T ss_dssp CCEEECTTCEEEEECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEECSSC
T ss_pred ceeEEeCCEEEEEEccccccccceEEeCcccccCCcCCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEEEECCE
Confidence 4599999999999999999999999999999999999999999999987766 489999999999999999999999999
Q ss_pred eeEEEeccceeeeee
Q 027479 138 NHLILREDDVVGILE 152 (223)
Q Consensus 138 ~y~ilre~DIlaii~ 152 (223)
+|+|+||+||||+++
T Consensus 86 eyli~re~DIlavi~ 100 (100)
T 1we3_O 86 EYVILSERDLLAVLQ 100 (100)
T ss_dssp EEEEECTTTEEEEEC
T ss_pred EEEEEEhHHEEEEeC
Confidence 999999999999985
No 5
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=99.92 E-value=2.2e-26 Score=181.85 Aligned_cols=88 Identities=14% Similarity=0.144 Sum_probs=80.4
Q ss_pred ccccccCCeEEEEecc----ccccccceEEecCC-CCCCCcceEEEEecCceecCCCeeeecccCCcEEEec--CCC---
Q 027479 59 TSIKPLGDRVLVKIKT----VEEKTDGGIFLPSA-AQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS--KYA--- 128 (223)
Q Consensus 59 ~~lkPLgDRVLVk~~e----~e~kT~gGIiLP~s-a~~K~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~--ky~--- 128 (223)
++|+||+|||||++.+ +|++|+|||+||++ +++||+.|+|||||+|+ .++.||+||+|+|+ +|+
T Consensus 7 m~ikPL~drVlvk~~~~~~~~E~kT~sGIilp~~aakekp~~g~VvAVG~g~------~~~~vKvGD~Vl~~kg~~~nvp 80 (111)
T 1g31_A 7 LPIRAVGEYVILVSEPAQAGDEEVTESGLIIGKRVQGEVPELCVVHSVGPDV------PEGFCEVGDLTSLPVGQIRNVP 80 (111)
T ss_dssp CSCEECTTEEEEEECSSCGGGCTTSCTTCCCCHHHHHHSEEEEEEEEECTTS------CTTSCCTTCEEEEEGGGCEEEC
T ss_pred cCceecCCEEEEEEcccCCCcceEcCCcEEeCCCccccCCceEEEEEECCCC------ccccccCCCEEEECCCccccCC
Confidence 7899999999999988 79999999999999 69999999999999997 34679999999995 477
Q ss_pred -----ceEEEEcC--eeeEEEeccceeeeee
Q 027479 129 -----GTELEFNG--ANHLILREDDVVGILE 152 (223)
Q Consensus 129 -----G~eV~~dg--~~y~ilre~DIlaii~ 152 (223)
|.+++.++ ++|++++++||+|+++
T Consensus 81 ~p~vi~g~i~~~~~~e~y~i~~~~dIlavy~ 111 (111)
T 1g31_A 81 HPFVALGLKQPKEIKQKFVTCHYKAIPCLYK 111 (111)
T ss_dssp CHHHHTTSSCGGGCCCCEEEEEGGGCCEECC
T ss_pred CcceeeeEEccCCcccEEEEEehHHeEEEeC
Confidence 78999999 9999999999999873
No 6
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=99.89 E-value=8.7e-24 Score=162.88 Aligned_cols=65 Identities=29% Similarity=0.543 Sum_probs=41.4
Q ss_pred CceeecCCeEEEEEecccccccceeEeecCccCCCceeEEEEeeCCccC-------------CceeecCCCCcEEEec
Q 027479 157 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVRVVNFCKFG-------------GPILFAAFPNTCITNN 221 (223)
Q Consensus 157 ~~l~PL~DRVLVk~~~~e~~T~gGi~Lp~~a~ek~~~G~VVAVG~G~~~-------------~~V~~~~~~Gt~i~~~ 221 (223)
|+|+||+||||||+.++|++|+|||+||++++|||++|+|||||||..+ ++|+|++|+||+|+++
T Consensus 1 m~i~PL~DRVlVk~~e~e~kT~gGI~LP~~a~eK~~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~d 78 (95)
T 3nx6_A 1 MSIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSE 78 (95)
T ss_dssp -CCCCCTTEEEEEEC-------------------CEEEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEET
T ss_pred CCeEEcCCEEEEEEccccccccceEEeCccccCCccccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEEC
Confidence 5799999999999999999999999999999999999999999999764 2589999999999986
No 7
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=99.88 E-value=2.2e-23 Score=161.13 Aligned_cols=65 Identities=28% Similarity=0.448 Sum_probs=60.8
Q ss_pred CceeecCCeEEEEEecccccccceeEeecCccCCCceeEEEEeeCCccCC-------------ceeecC-CCCcEEEec
Q 027479 157 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVRVVNFCKFGG-------------PILFAA-FPNTCITNN 221 (223)
Q Consensus 157 ~~l~PL~DRVLVk~~~~e~~T~gGi~Lp~~a~ek~~~G~VVAVG~G~~~~-------------~V~~~~-~~Gt~i~~~ 221 (223)
|+|+||+||||||+.++|++|+|||+||++++|||++|+|||||||..++ +|+|++ |+||+|+++
T Consensus 1 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~d 79 (97)
T 1pcq_O 1 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKID 79 (97)
T ss_dssp CEEEECSSEEEEEECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEET
T ss_pred CCceEcCCEEEEEEccccccccceEEeCcccccCCcccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEEC
Confidence 57999999999999999999999999999999999999999999996543 599999 999999986
No 8
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=99.88 E-value=3.2e-23 Score=160.76 Aligned_cols=65 Identities=34% Similarity=0.625 Sum_probs=60.7
Q ss_pred CceeecCCeEEEEEecccccccceeEeecCccCCCceeEEEEeeCCccC--------------CceeecCCCCcEEEec
Q 027479 157 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVRVVNFCKFG--------------GPILFAAFPNTCITNN 221 (223)
Q Consensus 157 ~~l~PL~DRVLVk~~~~e~~T~gGi~Lp~~a~ek~~~G~VVAVG~G~~~--------------~~V~~~~~~Gt~i~~~ 221 (223)
++|+||+||||||+.++|++|+|||+||++++|||++|+|||||||.++ ++|+|++|+||+|+++
T Consensus 3 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~d 81 (99)
T 1p3h_A 3 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYN 81 (99)
T ss_dssp CEEEECTTEEEEEECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEET
T ss_pred ceeEEeCCEEEEEEccccccccceEEeCcccccCCceEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEEC
Confidence 6899999999999999999999999999999999999999999999653 2589999999999986
No 9
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=99.88 E-value=2.1e-23 Score=162.12 Aligned_cols=65 Identities=37% Similarity=0.534 Sum_probs=60.5
Q ss_pred CceeecCCeEEEEEecccccccceeEeecCccCCCceeEEEEeeCCccCC-------------ceeecCCCCcEEEec
Q 027479 157 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVRVVNFCKFGG-------------PILFAAFPNTCITNN 221 (223)
Q Consensus 157 ~~l~PL~DRVLVk~~~~e~~T~gGi~Lp~~a~ek~~~G~VVAVG~G~~~~-------------~V~~~~~~Gt~i~~~ 221 (223)
++|+||+||||||+.++|++|+|||+||++++|||++|+|||||||..++ +|+|++|+||+|+++
T Consensus 6 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~d 83 (100)
T 1we3_O 6 TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEID 83 (100)
T ss_dssp CCEEECTTCEEEEECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEECS
T ss_pred ceeEEeCCEEEEEEccccccccceEEeCcccccCCcCCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEEEEC
Confidence 45999999999999999999999999999999999999999999996532 599999999999986
No 10
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=99.66 E-value=1.2e-17 Score=131.89 Aligned_cols=58 Identities=19% Similarity=0.260 Sum_probs=51.7
Q ss_pred CceeecCCeEEEEEec----ccccccceeEeecC-ccCCCceeEEEEeeCCcc------CCceeec--CCC
Q 027479 157 KDLKPLNDRVFIKVAE----AEETTAGGLLLTEA-SKEKPSIGMVRVVNFCKF------GGPILFA--AFP 214 (223)
Q Consensus 157 ~~l~PL~DRVLVk~~~----~e~~T~gGi~Lp~~-a~ek~~~G~VVAVG~G~~------~~~V~~~--~~~ 214 (223)
++|+||+|||||++.+ .|++|+|||+||++ ++|||+.|+|||||||.. ++.|+|+ +|+
T Consensus 7 m~ikPL~drVlvk~~~~~~~~E~kT~sGIilp~~aakekp~~g~VvAVG~g~~~~~vKvGD~Vl~~kg~~~ 77 (111)
T 1g31_A 7 LPIRAVGEYVILVSEPAQAGDEEVTESGLIIGKRVQGEVPELCVVHSVGPDVPEGFCEVGDLTSLPVGQIR 77 (111)
T ss_dssp CSCEECTTEEEEEECSSCGGGCTTSCTTCCCCHHHHHHSEEEEEEEEECTTSCTTSCCTTCEEEEEGGGCE
T ss_pred cCceecCCEEEEEEcccCCCcceEcCCcEEeCCCccccCCceEEEEEECCCCccccccCCCEEEECCCccc
Confidence 6899999999999988 78999999999999 699999999999999964 3579994 455
No 11
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=79.18 E-value=3 Score=36.67 Aligned_cols=24 Identities=50% Similarity=0.657 Sum_probs=19.9
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|+..
T Consensus 70 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 93 (378)
T 3uko_A 70 AAGIVESVGEGVT--------EVQAGDHVIPC 93 (378)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred ceEEEEEeCCCCC--------cCCCCCEEEEe
Confidence 4799999999862 58999999854
No 12
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=78.49 E-value=2.5 Score=36.36 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=27.4
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecC--CCceEEEEcCeeeEEEeccce
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSK--YAGTELEFNGANHLILREDDV 147 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~k--y~G~eV~~dg~~y~ilre~DI 147 (223)
..|+|+++|++.. .+++||+|.+.. +++ =.+|+.+.++.+
T Consensus 68 ~~G~V~~vG~~v~--------~~~~GdrV~~~~~~~G~------~aey~~v~~~~~ 109 (333)
T 1wly_A 68 AAAVVEEVGPGVT--------DFTVGERVCTCLPPLGA------YSQERLYPAEKL 109 (333)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEECSSSCCC------SBSEEEEEGGGC
T ss_pred eEEEEEEECCCCC--------CCCCCCEEEEecCCCCc------ceeEEEecHHHc
Confidence 5799999999862 589999997753 222 145666655544
No 13
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=77.62 E-value=3.2 Score=35.39 Aligned_cols=41 Identities=32% Similarity=0.379 Sum_probs=29.3
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecC----CCceEEEEcCeeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSK----YAGTELEFNGANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~k----y~G~eV~~dg~~y~ilre~DIl 148 (223)
..|+|+++|++.. .+++||+|.... +++ =.+|+++.++.++
T Consensus 66 ~~G~V~~vG~~v~--------~~~vGdrV~~~~~~~~~G~------~aey~~v~~~~~~ 110 (315)
T 3goh_A 66 GAGVIVKVGAKVD--------SKMLGRRVAYHTSLKRHGS------FAEFTVLNTDRVM 110 (315)
T ss_dssp EEEEEEEECTTSC--------GGGTTCEEEEECCTTSCCS------SBSEEEEETTSEE
T ss_pred eEEEEEEeCCCCC--------CCCCCCEEEEeCCCCCCcc------cccEEEEcHHHhc
Confidence 4799999999862 589999999753 222 1567777766543
No 14
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=77.16 E-value=2.6 Score=37.04 Aligned_cols=40 Identities=25% Similarity=0.243 Sum_probs=27.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCCceEEEEcCeeeEEEeccc
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDD 146 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV~~dg~~y~ilre~D 146 (223)
..|+|+++|++.. ..+++||+|....+++ =.+|+.+.++.
T Consensus 91 ~~G~V~~vG~~V~-------~~~~vGdrV~~~~~G~------~aey~~v~~~~ 130 (362)
T 2c0c_A 91 GIGEVVALGLSAS-------ARYTVGQAVAYMAPGS------FAEYTVVPASI 130 (362)
T ss_dssp EEEEEEEECTTGG-------GTCCTTCEEEEECSCC------SBSEEEEEGGG
T ss_pred eEEEEEEECCCcc-------CCCCCCCEEEEccCCc------ceeEEEEcHHH
Confidence 4799999999852 1589999999764332 14555555544
No 15
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=76.74 E-value=3.6 Score=35.78 Aligned_cols=24 Identities=38% Similarity=0.398 Sum_probs=20.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 80 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 103 (364)
T 1gu7_A 80 GLFEVIKVGSNVS--------SLEAGDWVIPS 103 (364)
T ss_dssp CEEEEEEECTTCC--------SCCTTCEEEES
T ss_pred eEEEEEEeCCCCC--------cCCCCCEEEec
Confidence 4799999999862 58999999875
No 16
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=76.02 E-value=3.2 Score=35.70 Aligned_cols=27 Identities=37% Similarity=0.558 Sum_probs=21.6
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCC
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYA 128 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~ 128 (223)
..|+|+++|++. ..+++||+|.+...+
T Consensus 71 ~~G~V~~vG~~v--------~~~~~GdrV~~~~~G 97 (334)
T 3qwb_A 71 ASGTVVAKGKGV--------TNFEVGDQVAYISNS 97 (334)
T ss_dssp EEEEEEEECTTC--------CSCCTTCEEEEECSS
T ss_pred eEEEEEEECCCC--------CCCCCCCEEEEeeCC
Confidence 579999999986 258999999975433
No 17
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=75.58 E-value=3.7 Score=35.20 Aligned_cols=41 Identities=32% Similarity=0.423 Sum_probs=29.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecC--CCceEEEEcCeeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSK--YAGTELEFNGANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~k--y~G~eV~~dg~~y~ilre~DIl 148 (223)
..|+|+++|++. ..+++||+|.+.. +++ =.+|+.+.++.++
T Consensus 65 ~~G~V~~vG~~v--------~~~~~GdrV~~~~~~~G~------~aey~~v~~~~~~ 107 (325)
T 3jyn_A 65 GAGVVEAVGDEV--------TRFKVGDRVAYGTGPLGA------YSEVHVLPEANLV 107 (325)
T ss_dssp EEEEEEEECTTC--------CSCCTTCEEEESSSSSCC------SBSEEEEEGGGEE
T ss_pred eEEEEEEECCCC--------CCCCCCCEEEEecCCCcc------ccceEEecHHHeE
Confidence 579999999986 2589999999864 222 1466666666543
No 18
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=74.56 E-value=4.2 Score=35.37 Aligned_cols=24 Identities=42% Similarity=0.541 Sum_probs=20.3
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|++||++.. .+++||+|...
T Consensus 80 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 103 (363)
T 3m6i_A 80 SAGEVIAVHPSVK--------SIKVGDRVAIE 103 (363)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred eEEEEEEECCCCC--------CCCCCCEEEEe
Confidence 5799999999862 58999999864
No 19
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=74.17 E-value=4 Score=36.74 Aligned_cols=24 Identities=42% Similarity=0.558 Sum_probs=20.4
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|++||++.. .+++||+|...
T Consensus 117 ~~G~V~~vG~~V~--------~~~vGDrV~~~ 140 (447)
T 4a0s_A 117 CSGVVVRTGIGVR--------RWKPGDHVIVH 140 (447)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred eeEEEEEECCCCC--------CCCCCCEEEEe
Confidence 4799999999862 58999999974
No 20
>2lqk_A Transcriptional regulator; RNA polymerase interacting domain, transcription regulator; NMR {Thermus thermophilus}
Probab=75.61 E-value=0.7 Score=32.77 Aligned_cols=31 Identities=19% Similarity=0.415 Sum_probs=21.7
Q ss_pred cccCCcEEEecCCC-c----e-EEEEcC--eeeEEEecc
Q 027479 115 SVKPGTQVIYSKYA-G----T-ELEFNG--ANHLILRED 145 (223)
Q Consensus 115 ~VkvGD~Vlf~ky~-G----~-eV~~dg--~~y~ilre~ 145 (223)
.+++||.|+|+.++ | . +.+++| .+|++++-.
T Consensus 6 ~f~~GD~VVy~~hGvg~i~gIe~~~v~G~~~~y~~l~~~ 44 (70)
T 2lqk_A 6 EFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFP 44 (70)
Confidence 48999999999987 3 2 234444 568877653
No 21
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=73.19 E-value=3.8 Score=35.45 Aligned_cols=24 Identities=38% Similarity=0.621 Sum_probs=19.9
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 65 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 88 (343)
T 2eih_A 65 GSGVVDAVGPGVE--------GFAPGDEVVIN 88 (343)
T ss_dssp EEEEEEEECSSCC--------SCCTTCEEEEC
T ss_pred eEEEEEEECCCCC--------CCCCCCEEEEC
Confidence 4799999999862 58999999953
No 22
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=73.10 E-value=5.2 Score=34.84 Aligned_cols=25 Identities=44% Similarity=0.601 Sum_probs=20.7
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecC
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSK 126 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~k 126 (223)
..|+|+++|++.. .+++||+|+...
T Consensus 92 ~~G~V~~vG~~v~--------~~~vGdrV~~~~ 116 (357)
T 1zsy_A 92 GVAQVVAVGSNVT--------GLKPGDWVIPAN 116 (357)
T ss_dssp CEEEEEEECTTCC--------SCCTTCEEEESS
T ss_pred EEEEEEEeCCCCC--------CCCCCCEEEEcC
Confidence 5799999999862 589999998754
No 23
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=71.87 E-value=4.8 Score=35.33 Aligned_cols=40 Identities=20% Similarity=0.279 Sum_probs=28.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCC----CceEEEEcCeeeEEEeccce
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKY----AGTELEFNGANHLILREDDV 147 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky----~G~eV~~dg~~y~ilre~DI 147 (223)
..|+|+++|++. ..+++||+|..... ++ =.+|+++.++.+
T Consensus 102 ~~G~V~~vG~~V--------~~~~vGDrV~~~~~~~~~G~------~aey~~v~~~~~ 145 (375)
T 2vn8_A 102 VSGVVMECGLDV--------KYFKPGDEVWAAVPPWKQGT------LSEFVVVSGNEV 145 (375)
T ss_dssp EEEEEEEECTTC--------CSCCTTCEEEEECCTTSCCS------SBSEEEEEGGGE
T ss_pred eeEEEEEeCCCC--------CCCCCCCEEEEecCCCCCcc------ceeEEEEcHHHe
Confidence 579999999986 25899999987431 22 156666666554
No 24
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=71.82 E-value=4.9 Score=34.30 Aligned_cols=41 Identities=29% Similarity=0.441 Sum_probs=27.4
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec-CCCceEEEEcCeeeEEEeccce
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS-KYAGTELEFNGANHLILREDDV 147 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~-ky~G~eV~~dg~~y~ilre~DI 147 (223)
..|+|+++|++.. .+++||+|.+. ...|. =.+|+.+.++.+
T Consensus 65 ~~G~V~~vG~~v~--------~~~~GdrV~~~g~~~G~-----~aey~~v~~~~~ 106 (327)
T 1qor_A 65 AAGIVSKVGSGVK--------HIKAGDRVVYAQSALGA-----YSSVHNIIADKA 106 (327)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEESCCSSCC-----SBSEEEEEGGGE
T ss_pred eEEEEEEECCCCC--------CCCCCCEEEECCCCCce-----eeeEEEecHHHc
Confidence 5799999999862 58999999654 11121 146666666554
No 25
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=70.89 E-value=5.7 Score=34.38 Aligned_cols=24 Identities=38% Similarity=0.562 Sum_probs=20.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 69 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 92 (348)
T 2d8a_A 69 VAGEVVEIGPGVE--------GIEVGDYVSVE 92 (348)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred ceEEEEEECCCCC--------cCCCCCEEEEc
Confidence 5799999999862 58999999875
No 26
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=70.88 E-value=5.1 Score=34.56 Aligned_cols=42 Identities=26% Similarity=0.124 Sum_probs=28.8
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCCceEEEEcCeeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV~~dg~~y~ilre~DIl 148 (223)
..|+|+++|++. ..+++||+|+.....|. =.+|+++.++.++
T Consensus 70 ~~G~V~~vG~~v--------~~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 111 (340)
T 3gms_A 70 GVGIVENVGAFV--------SRELIGKRVLPLRGEGT-----WQEYVKTSADFVV 111 (340)
T ss_dssp CEEEEEEECTTS--------CGGGTTCEEEECSSSCS-----SBSEEEEEGGGEE
T ss_pred eEEEEEEeCCCC--------CCCCCCCEEEecCCCcc-----ceeEEEcCHHHeE
Confidence 579999999986 25899999985422221 1467777766544
No 27
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=70.56 E-value=4.3 Score=35.15 Aligned_cols=24 Identities=33% Similarity=0.364 Sum_probs=20.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 66 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 89 (348)
T 3two_A 66 IAGIIKEVGKGVK--------KFKIGDVVGVG 89 (348)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred eeEEEEEECCCCC--------CCCCCCEEEEe
Confidence 5799999999862 58999999763
No 28
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=70.56 E-value=5 Score=34.99 Aligned_cols=42 Identities=26% Similarity=0.377 Sum_probs=28.6
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCCceEEEEcCeeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV~~dg~~y~ilre~DIl 148 (223)
..|+|+++|++.. .+++||+|......|. =.+|+.+.++.++
T Consensus 93 ~~G~V~~vG~~v~--------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 134 (353)
T 4dup_A 93 LSGEIVGVGPGVS--------GYAVGDKVCGLANGGA-----YAEYCLLPAGQIL 134 (353)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred cEEEEEEECCCCC--------CCCCCCEEEEecCCCc-----eeeEEEEcHHHcE
Confidence 4799999999862 5899999986432221 1466666666543
No 29
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=70.32 E-value=5.2 Score=35.00 Aligned_cols=71 Identities=27% Similarity=0.422 Sum_probs=40.5
Q ss_pred ccCCeEEEEecccc-----ccccceEE-----ecCCCCCCCcceEEEEecCceecCCCeeeecccCCcEEEecCC-CceE
Q 027479 63 PLGDRVLVKIKTVE-----EKTDGGIF-----LPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKY-AGTE 131 (223)
Q Consensus 63 PLgDRVLVk~~e~e-----~kT~gGIi-----LP~sa~~K~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky-~G~e 131 (223)
|--|-||||..-.- -....|.+ +|-. -.-...|+|+++|++.. .+++||+|..... .|.
T Consensus 55 ~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v-~G~E~~G~V~~vG~~v~--------~~~vGdrV~~~~~~~G~- 124 (351)
T 1yb5_A 55 PKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT-PGSDVAGVIEAVGDNAS--------AFKKGDRVFTSSTISGG- 124 (351)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBC-CCSCEEEEEEEECTTCT--------TCCTTCEEEESCCSSCS-
T ss_pred CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCc-CCceeEEEEEEECCCCC--------CCCCCCEEEEeCCCCCc-
Confidence 45688999976431 11222322 1110 11235799999999862 5899999987542 121
Q ss_pred EEEcCeeeEEEeccce
Q 027479 132 LEFNGANHLILREDDV 147 (223)
Q Consensus 132 V~~dg~~y~ilre~DI 147 (223)
=.+|+++.++.+
T Consensus 125 ----~aey~~v~~~~~ 136 (351)
T 1yb5_A 125 ----YAEYALAADHTV 136 (351)
T ss_dssp ----SBSEEEEEGGGE
T ss_pred ----ceeEEEECHHHe
Confidence 156666665544
No 30
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=70.12 E-value=6.3 Score=34.01 Aligned_cols=24 Identities=33% Similarity=0.398 Sum_probs=20.3
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 65 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 88 (343)
T 2dq4_A 65 FSGVVEAVGPGVR--------RPQVGDHVSLE 88 (343)
T ss_dssp EEEEEEEECTTCC--------SSCTTCEEEEC
T ss_pred ceEEEEEECCCCC--------cCCCCCEEEEC
Confidence 5799999999862 58999999974
No 31
>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}
Probab=70.09 E-value=3 Score=29.58 Aligned_cols=30 Identities=30% Similarity=0.412 Sum_probs=9.4
Q ss_pred cccCCcEEEecCCC-c-----eEEEEcC--eeeEEEec
Q 027479 115 SVKPGTQVIYSKYA-G-----TELEFNG--ANHLILRE 144 (223)
Q Consensus 115 ~VkvGD~Vlf~ky~-G-----~eV~~dg--~~y~ilre 144 (223)
.+++||.|+|..++ | .+.+++| .+|+.++-
T Consensus 2 ~l~~GD~VVh~~hGiG~~~gi~~~~v~g~~~ey~~l~y 39 (71)
T 3mlq_E 2 PHMPGDYLIHPEHGVGQYLGLETREVLGVKRDYLVLRY 39 (71)
T ss_dssp --------------CEEEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCCCCEEEECCCeeEEEeEEEEEEeCCeeEEEEEEEE
Confidence 46899999999987 3 2356666 57777763
No 32
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=68.73 E-value=6.7 Score=33.98 Aligned_cols=42 Identities=31% Similarity=0.372 Sum_probs=29.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCC---CceEEEEcCeeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKY---AGTELEFNGANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky---~G~eV~~dg~~y~ilre~DIl 148 (223)
..|+|+++|++.. .+++||+|++... .| .=.+|+++.++.+.
T Consensus 67 ~~G~V~~vG~~v~--------~~~~GdrV~~~~~~~~~G-----~~aey~~v~~~~~~ 111 (346)
T 3fbg_A 67 AIGVVESVGNEVT--------MFNQGDIVYYSGSPDQNG-----SNAEYQLINERLVA 111 (346)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEECCCTTSCC-----SSBSEEEEEGGGEE
T ss_pred cEEEEEEeCCCCC--------cCCCCCEEEEcCCCCCCc-----ceeEEEEEChHHeE
Confidence 5799999999862 5899999997531 12 11567777666543
No 33
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=68.70 E-value=6.3 Score=34.59 Aligned_cols=73 Identities=32% Similarity=0.394 Sum_probs=41.8
Q ss_pred ccCCeEEEEecccc-----ccccceEEecCC---CCCCCcceEEEEecCceecCCCeeeecccCCcEEEecCC---CceE
Q 027479 63 PLGDRVLVKIKTVE-----EKTDGGIFLPSA---AQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKY---AGTE 131 (223)
Q Consensus 63 PLgDRVLVk~~e~e-----~kT~gGIiLP~s---a~~K~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky---~G~e 131 (223)
|-.|-||||..-.- -....|-+-+.. .-.--..|+|+++|++.. .+++||+|++... .|.
T Consensus 50 ~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~--------~~~vGdrV~~~~~~~~~G~- 120 (363)
T 4dvj_A 50 PAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVT--------LFRPGDEVFYAGSIIRPGT- 120 (363)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTTCC--------SCCTTCEEEECCCTTSCCS-
T ss_pred CCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCCCC--------CCCCCCEEEEccCCCCCcc-
Confidence 55688999986531 111122211000 001235799999999862 5899999997431 121
Q ss_pred EEEcCeeeEEEecccee
Q 027479 132 LEFNGANHLILREDDVV 148 (223)
Q Consensus 132 V~~dg~~y~ilre~DIl 148 (223)
=.+|.++.++.+.
T Consensus 121 ----~aey~~v~~~~~~ 133 (363)
T 4dvj_A 121 ----NAEFHLVDERIVG 133 (363)
T ss_dssp ----CBSEEEEEGGGCE
T ss_pred ----ceEEEEeCHHHee
Confidence 1577777776554
No 34
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=68.34 E-value=5.9 Score=34.36 Aligned_cols=42 Identities=19% Similarity=0.109 Sum_probs=27.8
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCCceEEEEcCeeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV~~dg~~y~ilre~DIl 148 (223)
..|+|+++|++.. .+++||+|+.....|. =.+|+++.++.+.
T Consensus 68 ~~G~V~~vG~~v~--------~~~~GdrV~~~~~~G~-----~aey~~v~~~~~~ 109 (349)
T 4a27_A 68 CSGIVEALGDSVK--------GYEIGDRVMAFVNYNA-----WAEVVCTPVEFVY 109 (349)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred eEEEEEEeCCCCC--------CCCCCCEEEEecCCCc-----ceEEEEecHHHeE
Confidence 4799999999862 5899999985432221 1456666555443
No 35
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=66.10 E-value=4.5 Score=35.13 Aligned_cols=45 Identities=27% Similarity=0.240 Sum_probs=29.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCCceEEEEcC--eeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNG--ANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV~~dg--~~y~ilre~DIl 148 (223)
..|+|+++|++.. .+++||+|..-..+... .+| .+|+.+.++.+.
T Consensus 71 ~~G~V~~vG~~v~--------~~~vGdrV~~~~~g~~~--~~G~~aey~~v~~~~~~ 117 (343)
T 3gaz_A 71 LAGTVVAVGPEVD--------SFRVGDAVFGLTGGVGG--LQGTHAQFAAVDARLLA 117 (343)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEECCSSTT--CCCSSBSEEEEEGGGEE
T ss_pred eEEEEEEECCCCC--------CCCCCCEEEEEeCCCCC--CCcceeeEEEecHHHee
Confidence 5799999999862 58999999864311000 112 567777666544
No 36
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=66.01 E-value=8.4 Score=33.88 Aligned_cols=54 Identities=28% Similarity=0.423 Sum_probs=32.4
Q ss_pred ccCCeEEEEecccc-----ccccceEEecCCC---CCCCcceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 63 PLGDRVLVKIKTVE-----EKTDGGIFLPSAA---QTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 63 PLgDRVLVk~~e~e-----~kT~gGIiLP~sa---~~K~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
|--|-||||..-.- -....|-+ |... -.--..|+|+++|++.. .+++||+|...
T Consensus 45 ~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G~V~~vG~~v~--------~~~vGdrV~~~ 106 (370)
T 4ej6_A 45 PGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAGSAVR--------DIAPGARITGD 106 (370)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEEEEEEECTTCC--------SSCTTCEEEEC
T ss_pred CCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEEEEEEECCCCC--------CCCCCCEEEEC
Confidence 55688999886431 11112221 1110 01225799999999862 58999999863
No 37
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=65.82 E-value=5.6 Score=34.42 Aligned_cols=42 Identities=17% Similarity=0.275 Sum_probs=29.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecC----CCceEEEEcCeeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSK----YAGTELEFNGANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~k----y~G~eV~~dg~~y~ilre~DIl 148 (223)
..|+|+++|++.. ..+++||+|...- +++ =.+|+.++++.+.
T Consensus 87 ~~G~V~~vG~~v~-------~~~~vGdrV~~~~g~~~~G~------~aey~~v~~~~~~ 132 (349)
T 3pi7_A 87 GVGTIVAGGDEPY-------AKSLVGKRVAFATGLSNWGS------WAEYAVAEAAACI 132 (349)
T ss_dssp EEEEEEEECSSHH-------HHHHTTCEEEEECTTSSCCS------SBSEEEEEGGGEE
T ss_pred EEEEEEEECCCcc-------CCCCCCCEEEEeccCCCCcc------ceeeEeechHHeE
Confidence 4799999999741 1489999999753 222 1567777766554
No 38
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=65.05 E-value=7.3 Score=33.29 Aligned_cols=44 Identities=20% Similarity=0.277 Sum_probs=30.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecC-C---CceEEEEcCeeeEEEeccceeee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSK-Y---AGTELEFNGANHLILREDDVVGI 150 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~k-y---~G~eV~~dg~~y~ilre~DIlai 150 (223)
..|+|+++|++. ..+++||+|+... + .|. =.+|+.+.++.++-+
T Consensus 75 ~~G~V~~vG~~v--------~~~~~GdrV~~~~~~~~~~G~-----~aey~~v~~~~~~~i 122 (321)
T 3tqh_A 75 FSGEVIELGSDV--------NNVNIGDKVMGIAGFPDHPCC-----YAEYVCASPDTIIQK 122 (321)
T ss_dssp EEEEEEEECTTC--------CSCCTTCEEEEECSTTTCCCC-----SBSEEEECGGGEEEC
T ss_pred eEEEEEEeCCCC--------CCCCCCCEEEEccCCCCCCCc-----ceEEEEecHHHhccC
Confidence 479999999986 2589999998542 2 121 156777777665543
No 39
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=64.24 E-value=7.3 Score=34.40 Aligned_cols=42 Identities=21% Similarity=0.128 Sum_probs=29.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCCceEEEEcCeeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV~~dg~~y~ilre~DIl 148 (223)
..|+|+++|++.. ..+++||+|.....++ =.+|+++.++.++
T Consensus 98 ~~G~V~~vG~~v~-------~~~~vGdrV~~~~~G~------~aey~~v~~~~~~ 139 (379)
T 3iup_A 98 GAGVVVEAGSSPA-------AQALMGKTVAAIGGAM------YSQYRCIPADQCL 139 (379)
T ss_dssp EEEEEEEECSSHH-------HHTTTTCEEEECCSCC------SBSEEEEEGGGEE
T ss_pred eEEEEEEeCCCcc-------cCCCCCCEEEecCCCc------ceeEEEeCHHHeE
Confidence 5799999999741 1479999999865432 1566667666543
No 40
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=64.10 E-value=9 Score=33.03 Aligned_cols=23 Identities=43% Similarity=0.621 Sum_probs=18.9
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++ . .+++||+|+..
T Consensus 67 ~~G~V~~vG~~-~--------~~~~GdrV~~~ 89 (344)
T 2h6e_A 67 NAGTIVEVGEL-A--------KVKKGDNVVVY 89 (344)
T ss_dssp EEEEEEEECTT-C--------CCCTTCEEEEC
T ss_pred ceEEEEEECCC-C--------CCCCCCEEEEC
Confidence 57999999997 3 47999999653
No 41
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=63.89 E-value=9.2 Score=33.28 Aligned_cols=42 Identities=21% Similarity=0.205 Sum_probs=27.3
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCCceEEEEcCeeeEEEeccce
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDV 147 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV~~dg~~y~ilre~DI 147 (223)
..|+|+++|++.. ..+++||+|......|. =.+|+++.++.+
T Consensus 87 ~~G~V~~vG~~v~-------~~~~vGdrV~~~~~~G~-----~aey~~v~~~~~ 128 (354)
T 2j8z_A 87 ASGHVAELGPGCQ-------GHWKIGDTAMALLPGGG-----QAQYVTVPEGLL 128 (354)
T ss_dssp EEEEEEEECSCC---------CCCTTCEEEEECSSCC-----SBSEEEEEGGGE
T ss_pred eEEEEEEECCCcC-------CCCCCCCEEEEecCCCc-----ceeEEEeCHHHc
Confidence 4699999999851 25799999986433221 156666665544
No 42
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=62.01 E-value=8.9 Score=34.07 Aligned_cols=30 Identities=20% Similarity=0.200 Sum_probs=21.3
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++..... ....+++||+|+..
T Consensus 99 ~~G~V~~vG~~v~~~~--~~~~~~vGdrV~~~ 128 (404)
T 3ip1_A 99 FSGVVVEAGPEAINRR--TNKRFEIGEPVCAE 128 (404)
T ss_dssp EEEEEEEECTTCEETT--TTEECCTTCEEEEC
T ss_pred ceEEEEEECCCccccc--cCCCCCCCCEEEEC
Confidence 4799999999862111 01358999999974
No 43
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=60.99 E-value=5.8 Score=34.71 Aligned_cols=55 Identities=22% Similarity=0.251 Sum_probs=33.1
Q ss_pred cccCCeEEEEecccc-----ccccceEEecCCCC-----CCCcceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 62 KPLGDRVLVKIKTVE-----EKTDGGIFLPSAAQ-----TKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 62 kPLgDRVLVk~~e~e-----~kT~gGIiLP~sa~-----~K~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
.|--|-||||....- -....|-+ |.... .--..|+|+++|++.. .+++||+|...
T Consensus 50 ~~~~~eVlVkv~a~gi~~~D~~~~~g~~-~~~~~~P~v~GhE~~G~V~~vG~~v~--------~~~vGDrV~~~ 114 (363)
T 3uog_A 50 EAGEHDIIVRTLAVSLNYRDKLVLETGM-GLDLAFPFVPASDMSGVVEAVGKSVT--------RFRPGDRVIST 114 (363)
T ss_dssp CCCTTEEEEEEEEEECCHHHHHHHHHCT-TCCCCSSBCCCCEEEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred CCCCCEEEEEEEEEecCHHHHHHhcCCC-CCCCCCCcCcccceEEEEEEECCCCC--------CCCCCCEEEEe
Confidence 366688999986531 11111211 11000 1124799999999862 58999999975
No 44
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=59.32 E-value=5.5 Score=34.79 Aligned_cols=24 Identities=29% Similarity=0.504 Sum_probs=20.1
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 67 ~~G~V~~vG~~v~--------~~~~GdrV~~~ 90 (371)
T 1f8f_A 67 GSGIIEAIGPNVT--------ELQVGDHVVLS 90 (371)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred cceEEEEeCCCCC--------CCCCCCEEEec
Confidence 4799999999862 58999999863
No 45
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=59.31 E-value=5.6 Score=34.11 Aligned_cols=24 Identities=25% Similarity=0.374 Sum_probs=20.1
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 62 ~aG~V~~vG~~V~--------~~~~GdrV~~~ 85 (348)
T 4eez_A 62 GIGIVKEIGADVS--------SLQVGDRVSVA 85 (348)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEE
T ss_pred EEEEEEEECceee--------ecccCCeEeec
Confidence 4699999999863 58999999864
No 46
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=58.34 E-value=11 Score=32.68 Aligned_cols=71 Identities=21% Similarity=0.323 Sum_probs=39.9
Q ss_pred ccCCeEEEEecccc-----ccccceEEecCCCC-----CCCcceEEEEecCceecCCCeeeecccCCcEEEecCCCceEE
Q 027479 63 PLGDRVLVKIKTVE-----EKTDGGIFLPSAAQ-----TKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTEL 132 (223)
Q Consensus 63 PLgDRVLVk~~e~e-----~kT~gGIiLP~sa~-----~K~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV 132 (223)
|--|-||||..-.- -....|-+ |.... .--..|+|+++|++. .+++||+|......|.
T Consensus 46 ~~~~eVlVkv~a~gi~~~D~~~~~g~~-~~~~~~p~v~G~E~~G~V~~vG~~v---------~~~vGDrV~~~~~~G~-- 113 (342)
T 4eye_A 46 AGPNVVVVDVKAAGVCFPDYLMTKGEY-QLKMEPPFVPGIETAGVVRSAPEGS---------GIKPGDRVMAFNFIGG-- 113 (342)
T ss_dssp CCTTCEEEEEEEEECCHHHHHHHTTCS-SSCCCSSBCCCSEEEEEEEECCTTS---------SCCTTCEEEEECSSCC--
T ss_pred CCCCEEEEEEEEEecCHHHHHHhcCCC-CCCCCCCCccceeEEEEEEEECCCC---------CCCCCCEEEEecCCCc--
Confidence 55688999986431 11122221 11000 112579999999874 2899999987543221
Q ss_pred EEcCeeeEEEecccee
Q 027479 133 EFNGANHLILREDDVV 148 (223)
Q Consensus 133 ~~dg~~y~ilre~DIl 148 (223)
=.+|+.+.++.++
T Consensus 114 ---~aey~~v~~~~~~ 126 (342)
T 4eye_A 114 ---YAERVAVAPSNIL 126 (342)
T ss_dssp ---SBSEEEECGGGEE
T ss_pred ---ceEEEEEcHHHeE
Confidence 1456666555443
No 47
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=57.95 E-value=6.1 Score=34.45 Aligned_cols=23 Identities=35% Similarity=0.388 Sum_probs=19.5
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEe
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIY 124 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf 124 (223)
..|+|+++|++.. .+++||+|.+
T Consensus 71 ~~G~V~~vG~~v~--------~~~vGdrV~~ 93 (357)
T 2cf5_A 71 VVGEVVEVGSDVS--------KFTVGDIVGV 93 (357)
T ss_dssp EEEEEEEECSSCC--------SCCTTCEEEE
T ss_pred eeEEEEEECCCCC--------CCCCCCEEEE
Confidence 4799999999862 5899999985
No 48
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=57.87 E-value=6 Score=34.58 Aligned_cols=24 Identities=46% Similarity=0.617 Sum_probs=20.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 70 ~~G~V~~vG~~V~--------~~~vGdrV~~~ 93 (374)
T 1cdo_A 70 GAGIVESVGPGVT--------EFQPGEKVIPL 93 (374)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred ceEEEEEECCCCc--------cCCCCCEEEeC
Confidence 5799999999862 58999999875
No 49
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=57.72 E-value=6.1 Score=34.37 Aligned_cols=24 Identities=33% Similarity=0.558 Sum_probs=20.1
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 71 ~~G~V~~vG~~V~--------~~~vGdrV~~~ 94 (356)
T 1pl8_A 71 ASGTVEKVGSSVK--------HLKPGDRVAIE 94 (356)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred eEEEEEEECCCCC--------CCCCCCEEEEe
Confidence 5799999999862 58999999864
No 50
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=57.37 E-value=6.3 Score=33.98 Aligned_cols=24 Identities=29% Similarity=0.404 Sum_probs=20.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++. ..+++||+|...
T Consensus 64 ~~G~V~~vG~~v--------~~~~vGdrV~~~ 87 (345)
T 3jv7_A 64 GVGTVAELGEGV--------TGFGVGDAVAVY 87 (345)
T ss_dssp EEEEEEEECTTC--------CSCCTTCEEEEC
T ss_pred cEEEEEEECCCC--------CCCCCCCEEEEe
Confidence 479999999986 258999999874
No 51
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=57.21 E-value=6.3 Score=34.58 Aligned_cols=23 Identities=35% Similarity=0.403 Sum_probs=19.5
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEe
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIY 124 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf 124 (223)
..|+|+++|++.. .+++||+|..
T Consensus 78 ~~G~V~~vG~~V~--------~~~vGDrV~~ 100 (366)
T 1yqd_A 78 IVGEVTEVGSKVK--------KVNVGDKVGV 100 (366)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEE
T ss_pred eEEEEEEECCCCC--------cCCCCCEEEE
Confidence 5799999999862 5899999985
No 52
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=57.08 E-value=6.4 Score=34.11 Aligned_cols=24 Identities=33% Similarity=0.526 Sum_probs=20.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 68 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 91 (352)
T 1e3j_A 68 ASGTVVKVGKNVK--------HLKKGDRVAVE 91 (352)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred ceEEEEEeCCCCC--------CCCCCCEEEEc
Confidence 4799999999862 58999999864
No 53
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=56.94 E-value=6.4 Score=34.44 Aligned_cols=24 Identities=50% Similarity=0.623 Sum_probs=20.1
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 69 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 92 (376)
T 1e3i_A 69 CAGIVESVGPGVT--------NFKPGDKVIPF 92 (376)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred ccEEEEEECCCCc--------cCCCCCEEEEC
Confidence 4799999999862 58999999874
No 54
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=56.89 E-value=6.4 Score=34.41 Aligned_cols=54 Identities=33% Similarity=0.539 Sum_probs=32.4
Q ss_pred ccCCeEEEEecccc-----ccccceEE---ecCCCCCCCcceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 63 PLGDRVLVKIKTVE-----EKTDGGIF---LPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 63 PLgDRVLVk~~e~e-----~kT~gGIi---LP~sa~~K~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
|--|-||||..-.- -....|-+ +|-. -.--..|+|+++|++.. .+++||+|...
T Consensus 31 ~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v-~GhE~~G~V~~vG~~v~--------~~~vGdrV~~~ 92 (374)
T 2jhf_A 31 PKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI-AGHEAAGIVESIGEGVT--------TVRPGDKVIPL 92 (374)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHHTSSCCCSSBC-CCCSEEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred CCCCeEEEEEeEEeechhhHHHHcCCCCCCCCcc-cCcCceEEEEEECCCCC--------CCCCCCEEEEC
Confidence 45688999876431 11111211 1110 11235799999999862 58999999875
No 55
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=56.87 E-value=6.4 Score=34.31 Aligned_cols=24 Identities=50% Similarity=0.599 Sum_probs=20.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|++||++.. .+++||+|...
T Consensus 68 ~~G~V~~vG~~V~--------~~~vGdrV~~~ 91 (373)
T 2fzw_A 68 GAGIVESVGEGVT--------KLKAGDTVIPL 91 (373)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred ccEEEEEECCCCC--------CCCCCCEEEEC
Confidence 5799999999862 58999999875
No 56
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=56.86 E-value=6.4 Score=34.39 Aligned_cols=24 Identities=46% Similarity=0.679 Sum_probs=20.3
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 70 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 93 (373)
T 1p0f_A 70 AVGVVESIGAGVT--------CVKPGDKVIPL 93 (373)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred ceEEEEEECCCCC--------ccCCCCEEEEC
Confidence 5799999999862 58999999875
No 57
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=56.51 E-value=6.8 Score=33.70 Aligned_cols=23 Identities=43% Similarity=0.525 Sum_probs=19.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEe
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIY 124 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf 124 (223)
..|+|+++|++.. .+++||+|.+
T Consensus 65 ~~G~V~~vG~~v~--------~~~vGdrV~~ 87 (340)
T 3s2e_A 65 GVGYVSAVGSGVS--------RVKEGDRVGV 87 (340)
T ss_dssp EEEEEEEECSSCC--------SCCTTCEEEE
T ss_pred ceEEEEEECCCCC--------cCCCCCEEEe
Confidence 5799999999862 5899999954
No 58
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=55.88 E-value=6.9 Score=33.83 Aligned_cols=24 Identities=33% Similarity=0.311 Sum_probs=19.8
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 68 ~~G~V~~vG~~v~--------~~~~GdrV~~~ 91 (347)
T 2hcy_A 68 GAGVVVGMGENVK--------GWKIGDYAGIK 91 (347)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred ceEEEEEECCCCC--------CCcCCCEEEEe
Confidence 4799999999862 58999999863
No 59
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=55.60 E-value=7 Score=33.86 Aligned_cols=24 Identities=42% Similarity=0.664 Sum_probs=20.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|++||++. ..+++||+|...
T Consensus 61 ~~G~V~~vG~~v--------~~~~vGdrV~~~ 84 (352)
T 3fpc_A 61 AVGEVVEVGSEV--------KDFKPGDRVVVP 84 (352)
T ss_dssp EEEEEEEECTTC--------CSCCTTCEEEEC
T ss_pred ceEEEEEECCCC--------CcCCCCCEEEEc
Confidence 579999999986 258999999963
No 60
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=55.50 E-value=7 Score=34.04 Aligned_cols=24 Identities=29% Similarity=0.394 Sum_probs=19.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEe
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIY 124 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf 124 (223)
..|+|+++|++... .+++||+|.+
T Consensus 70 ~~G~V~~vG~~v~~-------~~~~GdrV~~ 93 (360)
T 1piw_A 70 IVGKVVKLGPKSNS-------GLKVGQRVGV 93 (360)
T ss_dssp EEEEEEEECTTCCS-------SCCTTCEEEE
T ss_pred ceEEEEEeCCCCCC-------CCCCCCEEEE
Confidence 57999999998520 4899999954
No 61
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=54.54 E-value=7.5 Score=33.56 Aligned_cols=24 Identities=38% Similarity=0.433 Sum_probs=19.9
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 63 ~~G~V~~vG~~v~--------~~~vGdrV~~~ 86 (339)
T 1rjw_A 63 GVGIVEEVGPGVT--------HLKVGDRVGIP 86 (339)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred ceEEEEEECCCCC--------cCCCCCEEEEe
Confidence 5799999999862 58999999863
No 62
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=54.33 E-value=6.8 Score=34.55 Aligned_cols=23 Identities=26% Similarity=0.380 Sum_probs=19.6
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEe
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIY 124 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf 124 (223)
..|+|+++|++.. .+++||+|..
T Consensus 69 ~~G~V~~vG~~v~--------~~~vGDrV~~ 91 (398)
T 1kol_A 69 ITGEVIEKGRDVE--------NLQIGDLVSV 91 (398)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEC
T ss_pred cEEEEEEECCCCC--------cCCCCCEEEE
Confidence 5799999999862 5899999985
No 63
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=54.23 E-value=6.8 Score=34.69 Aligned_cols=24 Identities=29% Similarity=0.313 Sum_probs=20.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 68 ~~G~V~~vG~~v~--------~~~vGDrV~~~ 91 (398)
T 2dph_A 68 ITGEVVEKGSDVE--------LMDIGDLVSVP 91 (398)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEECC
T ss_pred eEEEEEEECCCCC--------CCCCCCEEEEc
Confidence 5799999999862 58999999863
No 64
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=54.18 E-value=7.3 Score=35.28 Aligned_cols=24 Identities=29% Similarity=0.477 Sum_probs=20.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|+..
T Consensus 125 ~~G~Vv~vG~~v~--------~~~vGdrV~~~ 148 (456)
T 3krt_A 125 LAGVVLRTGPGVN--------AWQAGDEVVAH 148 (456)
T ss_dssp CEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred eEEEEEEECCCCC--------CCCCCCEEEEe
Confidence 4799999999862 58999999973
No 65
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=53.73 E-value=7.3 Score=33.67 Aligned_cols=23 Identities=26% Similarity=0.364 Sum_probs=19.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEe
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIY 124 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf 124 (223)
..|+|+++|++.. .+++||+|+.
T Consensus 70 ~~G~V~~vG~~v~--------~~~vGdrV~~ 92 (347)
T 1jvb_A 70 IAGKIEEVGDEVV--------GYSKGDLVAV 92 (347)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEE
T ss_pred ceEEEEEECCCCC--------CCCCCCEEEe
Confidence 4799999999862 5899999964
No 66
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=53.55 E-value=7.3 Score=34.34 Aligned_cols=24 Identities=38% Similarity=0.469 Sum_probs=19.9
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++.. .+++||+|...
T Consensus 84 ~~G~V~~vG~~V~--------~~~vGDrV~~~ 107 (369)
T 1uuf_A 84 IVGRVVAVGDQVE--------KYAPGDLVGVG 107 (369)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEEC
T ss_pred ceEEEEEECCCCC--------CCCCCCEEEEc
Confidence 5799999999862 58999999853
No 67
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=52.30 E-value=7.9 Score=33.77 Aligned_cols=23 Identities=30% Similarity=0.505 Sum_probs=19.2
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEe
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIY 124 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf 124 (223)
..|+|+++|++.. .+++||+|+.
T Consensus 81 ~~G~V~~vG~~v~--------~~~vGdrV~~ 103 (359)
T 1h2b_A 81 NVGYIEEVAEGVE--------GLEKGDPVIL 103 (359)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEE
T ss_pred ceEEEEEECCCCC--------CCCCCCEEEe
Confidence 5799999999862 5899999964
No 68
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=49.67 E-value=16 Score=36.15 Aligned_cols=71 Identities=21% Similarity=0.250 Sum_probs=40.5
Q ss_pred ccCCeEEEEecccc-----ccccceEEecCCC-CCCCcceEEEEecCceecCCCeeeecccCCcEEEecCCCceEEEEcC
Q 027479 63 PLGDRVLVKIKTVE-----EKTDGGIFLPSAA-QTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNG 136 (223)
Q Consensus 63 PLgDRVLVk~~e~e-----~kT~gGIiLP~sa-~~K~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV~~dg 136 (223)
|--|-||||..-.- -....|.+ |... -.--..|+|++||++.. .+++||+|+..-.++.
T Consensus 236 ~~~~eVlV~V~a~gin~~D~~~~~G~~-~~~~~lG~E~aG~V~~vG~~V~--------~~~vGDrV~~~~~G~~------ 300 (795)
T 3slk_A 236 LGDGEVRIAMRAAGVNFRDALIALGMY-PGVASLGSEGAGVVVETGPGVT--------GLAPGDRVMGMIPKAF------ 300 (795)
T ss_dssp CCSSEEEEEEEEEEECHHHHHHTTTCC-SSCCCSCCCEEEEEEEECSSCC--------SSCTTCEEEECCSSCS------
T ss_pred CCCCEEEEEEEEEccCHHHHHHHcCCC-CCCccccceeEEEEEEeCCCCC--------cCCCCCEEEEEecCCC------
Confidence 34578999875421 11122222 2111 11235799999999862 5899999986543321
Q ss_pred eeeEEEecccee
Q 027479 137 ANHLILREDDVV 148 (223)
Q Consensus 137 ~~y~ilre~DIl 148 (223)
.+|..+.++.+.
T Consensus 301 ae~~~v~~~~~~ 312 (795)
T 3slk_A 301 GPLAVADHRMVT 312 (795)
T ss_dssp SSEEEEETTSEE
T ss_pred cCEEEeehHHEE
Confidence 356666655443
No 69
>2wsc_L Photosystem I reaction center subunit XI, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Spinacia oleracea} PDB: 2wse_L* 2wsf_L* 2o01_L* 3lw5_L*
Probab=45.97 E-value=5.6 Score=34.16 Aligned_cols=49 Identities=22% Similarity=0.398 Sum_probs=9.1
Q ss_pred ecccccccccCCCCccccccccCCCCCCCchhhhhhhhhhhcccccccccccCC
Q 027479 13 VPARSLTSFDGLRPSSVKFASVGGAPSQRSFRRLVVKAAAVVAPKYTSIKPLGD 66 (223)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~aa~~~~~~~~~lkPLgD 66 (223)
+++....+..|+..++. ++..++||.+ +..|+|-..-.+++.-|+|.++
T Consensus 16 ~~s~~~~~p~g~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~m~~~I~p~~~ 64 (216)
T 2wsc_L 16 FTTKALVVPKGISGPAL----RGFPSPRRHT-SFTVRAIKTEKPTYQVIQPLNG 64 (216)
T ss_dssp ------------------------------------------CCSSSSCCSSSS
T ss_pred cccccccccCcccCCcc----cccCcccccc-ceEEEEEecCCchhhheecCCC
Confidence 34555567777776542 1122444432 2556776666777888888754
No 70
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=45.53 E-value=12 Score=32.91 Aligned_cols=24 Identities=38% Similarity=0.486 Sum_probs=20.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++|++. ..+++||+|...
T Consensus 70 ~~G~V~~vG~~v--------~~~~~GdrV~~~ 93 (371)
T 3gqv_A 70 YAGTVVAVGSDV--------THIQVGDRVYGA 93 (371)
T ss_dssp EEEEEEEECTTC--------CSCCTTCEEEEE
T ss_pred cEEEEEEeCCCC--------CCCCCCCEEEEe
Confidence 579999999986 258999999854
No 71
>3pqh_A Gene product 138; beta-helix, OB-fold, phage baseplate, iron-binding, cell MEM piercing, viral protein; 1.29A {Bacteriophage PHI92}
Probab=44.86 E-value=49 Score=26.18 Aligned_cols=38 Identities=8% Similarity=0.251 Sum_probs=25.7
Q ss_pred CCCCcceEEEEecCceecCCCeeeecccCCcEEEecCCCceEEEE
Q 027479 90 QTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEF 134 (223)
Q Consensus 90 ~~K~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV~~ 134 (223)
.+--..|.|||+..+++- +..+ .|+..+|..+ |..|.+
T Consensus 15 ~~~~S~gVvIa~~d~ryR-----~~gL-~GEvaiY~~~-G~~I~L 52 (127)
T 3pqh_A 15 EEVDSEKVIISNNKQTYA-----SFDP-NGNISVYNTQ-GMKIDM 52 (127)
T ss_dssp -----CCEEEEETTTEEE-----EECT-TSCEEEEETT-SCEEEE
T ss_pred hheecccEEEEeCCcccc-----cCCC-CCcEEEEcCC-CCEEEE
Confidence 344578999999998762 3457 9999999996 555554
No 72
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=42.82 E-value=13 Score=32.19 Aligned_cols=22 Identities=27% Similarity=0.376 Sum_probs=18.4
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..| |+++|++ . .+++||+|...
T Consensus 65 ~~G-V~~vG~~-~--------~~~vGdrV~~~ 86 (357)
T 2b5w_A 65 AVG-VVVDPND-T--------ELEEGDIVVPT 86 (357)
T ss_dssp EEE-EEEECTT-S--------SCCTTCEEEEC
T ss_pred eEE-EEEECCC-C--------CCCCCCEEEEC
Confidence 579 9999997 3 47999999875
No 73
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=42.32 E-value=15 Score=31.31 Aligned_cols=25 Identities=32% Similarity=0.501 Sum_probs=20.5
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecC
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSK 126 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~k 126 (223)
..|+|+++|++.. .+++||+|....
T Consensus 61 ~~G~V~~vG~~V~--------~~~~GdrV~~~~ 85 (346)
T 4a2c_A 61 FSGYIDAVGSGVD--------DLHPGDAVACVP 85 (346)
T ss_dssp EEEEEEEECTTCC--------SCCTTCEEEECC
T ss_pred EEEEEEEECCCcc--------cccCCCeEEeee
Confidence 4699999999873 579999998753
No 74
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=40.54 E-value=21 Score=30.22 Aligned_cols=45 Identities=22% Similarity=0.227 Sum_probs=27.7
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCC-ceEEEEcCeeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYA-GTELEFNGANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~-G~eV~~dg~~y~ilre~DIl 148 (223)
..|+|+++|.. .+++||+|....+. |....-.=.+|+.+.++.+.
T Consensus 65 ~~G~V~~~Gv~----------~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~ 110 (324)
T 3nx4_A 65 FAGTVHASEDP----------RFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLV 110 (324)
T ss_dssp EEEEEEEESST----------TCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCE
T ss_pred eEEEEEEeCCC----------CCCCCCEEEEcccccCCCCCCceeeEEecCHHHcE
Confidence 57999999842 48999999965321 11000011677777776654
No 75
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=39.82 E-value=17 Score=31.89 Aligned_cols=29 Identities=31% Similarity=0.507 Sum_probs=19.8
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEec
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYS 125 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ 125 (223)
..|+|+++| +..... ....+++||+|...
T Consensus 79 ~~G~V~~vG-~V~~~~--~~~~~~vGdrV~~~ 107 (380)
T 1vj0_A 79 GAGRVVEVN-GEKRDL--NGELLKPGDLIVWN 107 (380)
T ss_dssp EEEEEEEES-SCCBCT--TSCBCCTTCEEEEC
T ss_pred cEEEEEEeC-Cccccc--cCCCCCCCCEEEEc
Confidence 579999999 753110 00158999999974
No 76
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=37.60 E-value=1.3e+02 Score=26.77 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=52.3
Q ss_pred CcceEEEEecCceecCCCeeeecccCCcEEEecCCCceEEEEcCeeeEEEeccceeeeeecCccCceeecCCeEEEEEec
Q 027479 93 PQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAE 172 (223)
Q Consensus 93 ~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~G~eV~~dg~~y~ilre~DIlaii~~d~~~~l~PL~DRVLVk~~~ 172 (223)
..+-.|++-|+|...... ... |+-++---+-..|+.+|++|. |+.+|.|.|-..... .+...-|-+++....
T Consensus 206 ~~eteV~l~G~Ges~~~~-----~~~-d~wiWqLEGss~Vt~~~q~~~-L~~~DsLLIpa~~~y-~~~r~~gsv~L~I~~ 277 (286)
T 2qnk_A 206 TYETQVIAYGQGSSEGLR-----QNV-DVWLWQLEGSSVVTMGGRRLS-LAPDDSLLVLAGTSY-AWERTQGSVALSVTQ 277 (286)
T ss_dssp TSSEEEEEECSEEEEECC-----CSS-CEEEEEEESCEEEEETTEEEE-ECTTEEEEECTTCCE-EEEECTTCEEEEEEE
T ss_pred CCceEEEEEcCCcccccc-----CcC-cEEEEEEcCceEEEECCeEEe-ccCCCEEEecCCCeE-EEEecCCeEEEEEEE
Confidence 346678889999864321 222 888877666567999999987 788888877665444 477777888887765
Q ss_pred cc
Q 027479 173 AE 174 (223)
Q Consensus 173 ~e 174 (223)
.+
T Consensus 278 ~p 279 (286)
T 2qnk_A 278 DP 279 (286)
T ss_dssp CG
T ss_pred Cc
Confidence 43
No 77
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=31.25 E-value=15 Score=28.85 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=22.2
Q ss_pred ceEEecCCCCCCCcceEEEEecCceecCCCeeeecccCCcEEEecCC
Q 027479 81 GGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKY 127 (223)
Q Consensus 81 gGIiLP~sa~~K~~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky 127 (223)
.||-||.++.+....|+-|+. -++++||.|+|...
T Consensus 45 ~Gi~lPr~s~~q~~~g~~V~~------------~~l~pGDLvFf~~~ 79 (135)
T 2k1g_A 45 FGLELPRSTYEQQEMGKSVSR------------SNLRTGDLVLFRAG 79 (135)
T ss_dssp TCCCCCSSHHHHGGGSEEECG------------GGCCTTEEEEEEET
T ss_pred CCCCCCCCHHHHhhCCcEecH------------HHccCCcEEEECCC
Confidence 467778766443344443321 25799999999753
No 78
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=30.63 E-value=57 Score=24.95 Aligned_cols=30 Identities=20% Similarity=0.221 Sum_probs=20.6
Q ss_pred cCceecCCCeeeecccCCcEEEecC-CCceE
Q 027479 102 GEGKTVGKAKLDISVKPGTQVIYSK-YAGTE 131 (223)
Q Consensus 102 G~G~~~~~~~vp~~VkvGD~Vlf~k-y~G~e 131 (223)
|......++.-+..++.||.++|++ +.|+-
T Consensus 70 G~~~lt~ddG~~~~l~aGD~~~~P~G~~gtW 100 (116)
T 3es4_A 70 GEALYSQADADPVKIGPGSIVSIAKGVPSRL 100 (116)
T ss_dssp CCEEEEETTCCCEEECTTEEEEECTTCCEEE
T ss_pred eEEEEEeCCCeEEEECCCCEEEECCCCeEEE
Confidence 4444433333467899999999998 77754
No 79
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=30.07 E-value=1.3e+02 Score=23.93 Aligned_cols=70 Identities=16% Similarity=0.197 Sum_probs=38.3
Q ss_pred ecccCCcEEEecCCCceEEEEcCeeeEEEeccceeeeeecC--ccCceeecCCeEEEEEecccccccceeEeecCccCCC
Q 027479 114 ISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETD--EIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKP 191 (223)
Q Consensus 114 ~~VkvGD~Vlf~ky~G~eV~~dg~~y~ilre~DIlaii~~d--~~~~l~PL~DRVLVk~~~~e~~T~gGi~Lp~~a~ek~ 191 (223)
..+..||.|++.... + .+..||..+...+ -+|.+..-.+++.+....+.- .-|.++. .+-.
T Consensus 122 p~i~~GD~viv~~~~--~----------~~~G~ivv~~~~~~~~vKr~~~~~~~~~L~~~N~~y---~~i~i~~--~~~~ 184 (196)
T 3k2z_A 122 EHICDGDLVLVRRQD--W----------AQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREM---SSMFFRA--EKVK 184 (196)
T ss_dssp GTCCTTCEEEEEECS--C----------CCTTCEEEEEETTEEEEEEEEEETTEEEEECSCTTS---CCEEEEG--GGCE
T ss_pred CCCCCCCEEEEeccC--c----------CCCCCEEEEEECCcEEEEEEEEECCEEEEEECCCCC---CCEEecC--CCEE
Confidence 468999999987642 1 1333443333222 235555556666666554332 2456653 2334
Q ss_pred ceeEEEEee
Q 027479 192 SIGMVRVVN 200 (223)
Q Consensus 192 ~~G~VVAVG 200 (223)
..|+|+.+-
T Consensus 185 i~G~Vv~~~ 193 (196)
T 3k2z_A 185 ILGKVVGVF 193 (196)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 578888763
No 80
>1kca_A Repressor protein CI; gene regulation, DNA-binding, lambda repressor, protein oligomerization, DNA-looping; 2.91A {Enterobacteria phage lambda} SCOP: b.87.1.1
Probab=28.91 E-value=1.2e+02 Score=22.06 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=35.3
Q ss_pred ecccCCcEEEecCCCceEEEEcCeeeEEEeccceeeeeecCccCceeecCCeEEEEEecccccccceeEeecCccCCCce
Q 027479 114 ISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSI 193 (223)
Q Consensus 114 ~~VkvGD~Vlf~ky~G~eV~~dg~~y~ilre~DIlaii~~d~~~~l~PL~DRVLVk~~~~e~~T~gGi~Lp~~a~ek~~~ 193 (223)
..+..||.|++.+.. +++ +|+ +++++-++ ..--+|.|.-..+++.+....+.-. -+.+++ +-...
T Consensus 31 p~i~~Gd~v~Vd~~~--~~~-~Gd-ivv~~~~~-----~~~~vKrl~~~~~~~~L~s~N~~y~---~~~~~~---~~~Ii 95 (109)
T 1kca_A 31 PSFPDGMLILVDPEQ--AVE-PGD-FCIARLGG-----DEFTFKKLIRDSGQVFLQPLNPQYP---MIPCNE---SCSVV 95 (109)
T ss_dssp SCCCTTCEEEEETTS--CCC-TTC-EEEEECST-----TCEEEEEEEEETTEEEEECSSTTSC---CEECCT---TCEEE
T ss_pred CeeCCCCEEEEecCC--cCC-CCC-EEEEEECC-----CeEEEEEEEEeCCEEEEEECCCCCC---CEEcCC---CcEEE
Confidence 468899999987642 111 222 22222211 0012466655666666665543322 233432 23357
Q ss_pred eEEEEe
Q 027479 194 GMVRVV 199 (223)
Q Consensus 194 G~VVAV 199 (223)
|+|+.+
T Consensus 96 G~Vv~~ 101 (109)
T 1kca_A 96 GKVIAS 101 (109)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888865
No 81
>2wsc_K Photosystem I reaction center subunit PSAK, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Hordeum vulgare} PDB: 2wse_K* 2wsf_K* 3lw5_K*
Probab=28.35 E-value=12 Score=29.89 Aligned_cols=35 Identities=31% Similarity=0.377 Sum_probs=0.4
Q ss_pred cccccccCCCCccccccccCCCCCCCchhhhhhhhh
Q 027479 16 RSLTSFDGLRPSSVKFASVGGAPSQRSFRRLVVKAA 51 (223)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~aa 51 (223)
.++++|.|||++.... ++...+..|+++.+.+||-
T Consensus 9 ~~~p~f~glr~~~~~~-~~~~~~~~~~r~~~~~r~~ 43 (131)
T 2wsc_K 9 TSVPQFHGLRTYSSPR-SMATLPSLRRRRSQGIRCD 43 (131)
T ss_dssp -----------------------------------C
T ss_pred ccCcccccccccCCcc-ccccccccccccceeeEee
Confidence 5688999999754322 2222222233344666663
No 82
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=25.27 E-value=66 Score=27.17 Aligned_cols=43 Identities=28% Similarity=0.404 Sum_probs=26.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCC-ceEEEEcC--eeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYA-GTELEFNG--ANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~-G~eV~~dg--~~y~ilre~DIl 148 (223)
..|+|+++|. ..+++||+|....+. |. ..+| .+|+.+.++.+.
T Consensus 69 ~~G~V~~~~v----------~~~~vGdrV~~~~~~~g~--~~~G~~aey~~v~~~~~~ 114 (330)
T 1tt7_A 69 AAGTVVSSND----------PRFAEGDEVIATSYELGV--SRDGGLSEYASVPGDWLV 114 (330)
T ss_dssp EEEEEEECSS----------TTCCTTCEEEEESTTBTT--TBCCSSBSSEEECGGGEE
T ss_pred EEEEEEEcCC----------CCCCCCCEEEEcccccCC--CCCccceeEEEecHHHeE
Confidence 4699999753 147999999965321 11 0112 567777665543
No 83
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=23.82 E-value=70 Score=22.66 Aligned_cols=17 Identities=18% Similarity=0.475 Sum_probs=12.2
Q ss_pred eecccCCcEEEecCCCce
Q 027479 113 DISVKPGTQVIYSKYAGT 130 (223)
Q Consensus 113 p~~VkvGD~Vlf~ky~G~ 130 (223)
+..-.+||+|+ .+|.|.
T Consensus 7 ~~~~~vgd~Vm-aRW~Gd 23 (66)
T 2l8d_A 7 NRKYADGEVVM-GRWPGS 23 (66)
T ss_dssp SSSSCSSCEEE-EECTTS
T ss_pred ceEeecCCEEE-EEcCCC
Confidence 34678999998 566763
No 84
>3i4o_A Translation initiation factor IF-1; cytoplasm, protein biosynthesis; 1.47A {Mycobacterium tuberculosis} SCOP: b.40.4.5
Probab=21.96 E-value=1.2e+02 Score=21.84 Aligned_cols=36 Identities=17% Similarity=0.357 Sum_probs=22.8
Q ss_pred ceeeeeecCccC-ceeec-CCeEEEEEecccccccceeE
Q 027479 146 DVVGILETDEIK-DLKPL-NDRVFIKVAEAEETTAGGLL 182 (223)
Q Consensus 146 DIlaii~~d~~~-~l~PL-~DRVLVk~~~~e~~T~gGi~ 182 (223)
.++|.+..-.-+ .++|+ +|+|+|+...-. -|+|=|+
T Consensus 38 ~~~c~i~GK~Rk~~I~Il~GD~V~ve~~~yd-~~kgrIi 75 (79)
T 3i4o_A 38 KVLAHISGKMRQHYIRILPEDRVVVELSPYD-LSRGRIV 75 (79)
T ss_dssp EEEEEECHHHHHTTCCCCTTCEEEEEEETTE-EEEEEEE
T ss_pred EEEEEeCcceecCCccCCCCCEEEEEECccC-CCcEEEE
Confidence 366777654333 45555 899999987643 5565554
No 85
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=21.85 E-value=1.9e+02 Score=21.63 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=14.3
Q ss_pred ecccCCcEEEecCCC---ceEEEEc
Q 027479 114 ISVKPGTQVIYSKYA---GTELEFN 135 (223)
Q Consensus 114 ~~VkvGD~Vlf~ky~---G~eV~~d 135 (223)
.-|.+||.+...+.. |.+|++|
T Consensus 12 ykV~~Gd~i~vekl~~~~G~~v~~~ 36 (101)
T 3v2d_V 12 YRVEPGLKLRVEKLDAEPGATVELP 36 (101)
T ss_dssp EEECTTCEEEESCCSCCTTCEEEEC
T ss_pred EEEeCCCEEEECCcCCCCCCEEEEE
Confidence 457777777776643 5666665
No 86
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=20.50 E-value=62 Score=27.30 Aligned_cols=45 Identities=24% Similarity=0.206 Sum_probs=26.0
Q ss_pred cceEEEEecCceecCCCeeeecccCCcEEEecCCC-ceEEEEcCeeeEEEecccee
Q 027479 94 QAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYA-GTELEFNGANHLILREDDVV 148 (223)
Q Consensus 94 ~~G~VVAVG~G~~~~~~~vp~~VkvGD~Vlf~ky~-G~eV~~dg~~y~ilre~DIl 148 (223)
..|+|+++|. ..+++||+|....+. |....-.=.+|+++.++.+.
T Consensus 68 ~~G~V~~~~v----------~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~ 113 (328)
T 1xa0_A 68 LAGVVVSSQH----------PRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLV 113 (328)
T ss_dssp EEEEEEECCS----------SSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCE
T ss_pred eEEEEEecCC----------CCCCCCCEEEEccccCCCCCCccceeEEEechHHeE
Confidence 4799999653 247999999975321 11000001577777665543
Done!