Your job contains 1 sequence.
>027481
MKSAFRNAVALRTLPHYHFINPHFHSLPRFSVAAVSSPPSSLVSPSKPETFRFRRRSSPL
RVRYSSMTGGETDAPASMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHV
HQSRPLSEVLEKPKAQVDGLKELYGRLAEVLCECPGEYYRFHNDWRSETQTVVSLLAFMH
WLETGKLLMHTEAEEKLGMNQAEFALDIEDYLIGEHSDECHIY
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027481
(223 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0033528 - symbol:trsn "translin" species:7227 "Dro... 184 2.3e-14 1
MGI|MGI:109263 - symbol:Tsn "translin" species:10090 "Mus... 160 8.2e-12 1
DICTYBASE|DDB_G0270384 - symbol:tsn "translin" species:44... 159 1.0e-11 1
UNIPROTKB|F1NCV4 - symbol:TSN "Translin" species:9031 "Ga... 159 1.0e-11 1
UNIPROTKB|F1NT44 - symbol:TSN "Translin" species:9031 "Ga... 159 1.0e-11 1
UNIPROTKB|Q15631 - symbol:TSN "Translin" species:9606 "Ho... 158 1.3e-11 1
UNIPROTKB|Q71SY3 - symbol:Tsn "Protein Tsn" species:10116... 158 1.3e-11 1
UNIPROTKB|Q08DM8 - symbol:TSN "Translin" species:9913 "Bo... 154 3.5e-11 1
UNIPROTKB|F1PFI5 - symbol:TSN "Uncharacterized protein" s... 154 3.5e-11 1
UNIPROTKB|F1RXY7 - symbol:TSN "Uncharacterized protein" s... 154 3.5e-11 1
UNIPROTKB|E9PGT1 - symbol:TSN "Translin" species:9606 "Ho... 153 4.5e-11 1
UNIPROTKB|P79769 - symbol:TSN "Translin" species:9031 "Ga... 152 5.8e-11 1
UNIPROTKB|H7C1D4 - symbol:TSN "Translin" species:9606 "Ho... 147 2.0e-10 1
RGD|621107 - symbol:Tsn "translin" species:10116 "Rattus ... 144 1.0e-09 1
UNIPROTKB|E9PT79 - symbol:Tsn "Protein Tsn" species:10116... 144 1.0e-09 1
ZFIN|ZDB-GENE-030131-6039 - symbol:tsn "translin" species... 135 4.3e-08 1
DICTYBASE|DDB_G0284837 - symbol:tsnax "translin-associate... 117 3.6e-05 1
>FB|FBgn0033528 [details] [associations]
symbol:trsn "translin" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0050821
"protein stabilization" evidence=IMP] [GO:0007630 "jump response"
evidence=IMP] [GO:0004521 "endoribonuclease activity" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] InterPro:IPR002848
InterPro:IPR016068 InterPro:IPR016069 Pfam:PF01997 EMBL:AE013599
GO:GO:0005737 GO:GO:0050821 GO:GO:0016246 GO:GO:0043565
GO:GO:0004521 GO:GO:0007630 Gene3D:1.20.58.190 Gene3D:1.20.58.200
PANTHER:PTHR10741 SUPFAM:SSF74784 GeneTree:ENSGT00390000014517
OMA:RPLNISH FlyBase:FBgn0033528 EMBL:AY118870 RefSeq:NP_610591.1
UniGene:Dm.12127 PDB:2QRX PDB:2QVA PDB:3AXJ PDB:3RIU PDB:4DG7
PDBsum:2QRX PDBsum:2QVA PDBsum:3AXJ PDBsum:3RIU PDBsum:4DG7
SMR:Q7JVK6 IntAct:Q7JVK6 STRING:Q7JVK6 EnsemblMetazoa:FBtr0088306
GeneID:36110 KEGG:dme:Dmel_CG11761 UCSC:CG11761-RA CTD:36110
InParanoid:Q7JVK6 EvolutionaryTrace:Q7JVK6 GenomeRNAi:36110
NextBio:796918 Uniprot:Q7JVK6
Length = 235
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 45/137 (32%), Positives = 76/137 (55%)
Query: 82 FEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQS-RPLSEVLEKPKAQVDGL 140
F +++ +D +RE IR VV EIE +++ L +H +S + QV+
Sbjct: 10 FSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQISAACGLARKQVELC 69
Query: 141 KELYGRLAEVLCECPGEYYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEEKLGM- 199
+ Y +LAE++ G+YYR+ + W TQ ++ ++A + +LE G L+ E LG+
Sbjct: 70 AQKYQKLAELVPA--GQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGLK 127
Query: 200 -NQAE-FALDIEDYLIG 214
+Q+E F LD+EDYL+G
Sbjct: 128 ISQSEGFHLDVEDYLLG 144
>MGI|MGI:109263 [details] [associations]
symbol:Tsn "translin" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA;TAS] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0090305 "nucleic
acid phosphodiester bond hydrolysis" evidence=IEA]
InterPro:IPR002848 InterPro:IPR016068 InterPro:IPR016069
Pfam:PF01997 MGI:MGI:109263 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003729 GO:GO:0090305 GO:GO:0004519
eggNOG:NOG268068 HOGENOM:HOG000198374 Gene3D:1.20.58.190
Gene3D:1.20.58.200 PANTHER:PTHR10741 SUPFAM:SSF74784 CTD:7247
GeneTree:ENSGT00390000014517 HOVERGEN:HBG000373 OMA:VLIMASE
OrthoDB:EOG4S7JQZ EMBL:X81464 EMBL:Y12568 EMBL:Y12569 EMBL:Y12570
EMBL:Y12571 EMBL:Y12572 EMBL:BC004615 IPI:IPI00124684
RefSeq:NP_035780.1 UniGene:Mm.426637 PDB:1KEY PDBsum:1KEY
ProteinModelPortal:Q62348 SMR:Q62348 STRING:Q62348
PhosphoSite:Q62348 PaxDb:Q62348 PRIDE:Q62348
Ensembl:ENSMUST00000027623 GeneID:22099 KEGG:mmu:22099
InParanoid:Q62348 EvolutionaryTrace:Q62348 NextBio:301947
Bgee:Q62348 CleanEx:MM_TSN Genevestigator:Q62348
GermOnline:ENSMUSG00000026374 Uniprot:Q62348
Length = 228
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 45/142 (31%), Positives = 67/142 (47%)
Query: 77 SMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQ 136
S+ + F + + L +RE IR VV +E R + L VHQ ++ ++
Sbjct: 2 SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLKA 61
Query: 137 VDGLKELYGRLAEVLCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEE 195
+ + L + + P E YYRFH WR Q +V L AF+ +LET L+ E
Sbjct: 62 REHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTE 121
Query: 196 KLGMN---QAEFALDIEDYLIG 214
LG+ + F LD+EDYL G
Sbjct: 122 ILGIEPDREKGFHLDVEDYLSG 143
>DICTYBASE|DDB_G0270384 [details] [associations]
symbol:tsn "translin" species:44689 "Dictyostelium
discoideum" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002848 InterPro:IPR016068 InterPro:IPR016069
Pfam:PF01997 dictyBase:DDB_G0270384 EMBL:AAFI02000005 GO:GO:0043565
eggNOG:NOG268068 Gene3D:1.20.58.190 Gene3D:1.20.58.200
PANTHER:PTHR10741 SUPFAM:SSF74784 ProtClustDB:CLSZ2430226
RefSeq:XP_646754.1 ProteinModelPortal:Q55BS7
EnsemblProtists:DDB0191014 GeneID:8617727 KEGG:ddi:DDB_G0270384
InParanoid:Q55BS7 OMA:RPLNISH Uniprot:Q55BS7
Length = 214
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 50/146 (34%), Positives = 82/146 (56%)
Query: 78 MEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQ-SRPLS--EVLEK-- 132
ME FE F +L++ LR+ I+ ++ +IE I R + + HQ + +S ++LE+
Sbjct: 1 MENLFESFTEELEQDFQLRQNIKEIMTKIEPIDRKLSQMVQTYHQVNNTMSYQQLLEEIQ 60
Query: 133 P-KAQVDGLKELYGRLAEVLCECPGEYYRFHNDWR-SETQTVVSLLAFMHWLETGKLLMH 190
P KAQ+D LK L + VL YY++ + W+ S TQ SL+ F +W+E LL
Sbjct: 61 PMKAQIDQLKLL---IKPVL------YYKYRDYWKFSITQISFSLI-FSYWVEKKSLLKI 110
Query: 191 TEAEEKLGMNQ---AEFALDIEDYLI 213
+ + LG+++ F+L++EDYLI
Sbjct: 111 DQVQSILGLDENKPGSFSLELEDYLI 136
>UNIPROTKB|F1NCV4 [details] [associations]
symbol:TSN "Translin" species:9031 "Gallus gallus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR002848 InterPro:IPR016068 InterPro:IPR016069
Pfam:PF01997 GO:GO:0043565 Gene3D:1.20.58.190 Gene3D:1.20.58.200
PANTHER:PTHR10741 SUPFAM:SSF74784 GeneTree:ENSGT00390000014517
EMBL:AADN02016872 IPI:IPI00821669 Ensembl:ENSGALT00000038018
ArrayExpress:F1NCV4 Uniprot:F1NCV4
Length = 160
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 45/142 (31%), Positives = 67/142 (47%)
Query: 77 SMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQ 136
S+ F + L +RE IR VV +E R M L VHQ ++ +K +
Sbjct: 6 SVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLLQGVHQGAGFQDIPKKCQKA 65
Query: 137 VDGLKELYGRLAEVLCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEE 195
+ + ++ + + P + YYRFH WR Q +V L +F+ +LET L+ E
Sbjct: 66 REHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAE 125
Query: 196 KLGMN---QAEFALDIEDYLIG 214
LG+ + F LDIEDYL G
Sbjct: 126 ILGIEADRERGFHLDIEDYLSG 147
>UNIPROTKB|F1NT44 [details] [associations]
symbol:TSN "Translin" species:9031 "Gallus gallus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR002848 InterPro:IPR016068 InterPro:IPR016069
Pfam:PF01997 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003729 Gene3D:1.20.58.190 Gene3D:1.20.58.200
PANTHER:PTHR10741 SUPFAM:SSF74784 GeneTree:ENSGT00390000014517
OMA:VLIMASE IPI:IPI00598812 EMBL:AADN02016872
Ensembl:ENSGALT00000019041 ArrayExpress:F1NT44 Uniprot:F1NT44
Length = 229
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 45/142 (31%), Positives = 67/142 (47%)
Query: 77 SMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQ 136
S+ F + L +RE IR VV +E R M L VHQ ++ +K +
Sbjct: 2 SVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLLQGVHQGAGFQDIPKKCQKA 61
Query: 137 VDGLKELYGRLAEVLCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEE 195
+ + ++ + + P + YYRFH WR Q +V L +F+ +LET L+ E
Sbjct: 62 REHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAE 121
Query: 196 KLGMN---QAEFALDIEDYLIG 214
LG+ + F LDIEDYL G
Sbjct: 122 ILGIEADRERGFHLDIEDYLSG 143
>UNIPROTKB|Q15631 [details] [associations]
symbol:TSN "Translin" species:9606 "Homo sapiens"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0006310 "DNA recombination" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR002848
InterPro:IPR016068 InterPro:IPR016069 Pfam:PF01997 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0043565 GO:GO:0003729
GO:GO:0006310 GO:GO:0090305 GO:GO:0004519 EMBL:AC018737
eggNOG:NOG268068 HOGENOM:HOG000198374 Gene3D:1.20.58.190
Gene3D:1.20.58.200 PANTHER:PTHR10741 SUPFAM:SSF74784 PDB:3PJA
PDB:3QB5 PDBsum:3PJA PDBsum:3QB5 CTD:7247 HOVERGEN:HBG000373
OMA:VLIMASE OrthoDB:EOG4S7JQZ EMBL:X78627 EMBL:BT019490
EMBL:BT019491 EMBL:AK296469 EMBL:BC002359 EMBL:Y12563 EMBL:Y12564
EMBL:Y12565 EMBL:Y12566 EMBL:Y12567 IPI:IPI00018768 IPI:IPI00922875
PIR:S51738 RefSeq:NP_001248330.1 RefSeq:NP_004613.1
UniGene:Hs.75066 PDB:1J1J PDBsum:1J1J ProteinModelPortal:Q15631
SMR:Q15631 DIP:DIP-42216N IntAct:Q15631 MINT:MINT-5002843
STRING:Q15631 PhosphoSite:Q15631 DMDM:6136060 PaxDb:Q15631
PeptideAtlas:Q15631 PRIDE:Q15631 DNASU:7247 Ensembl:ENST00000389682
Ensembl:ENST00000536142 GeneID:7247 KEGG:hsa:7247 UCSC:uc002tnl.3
GeneCards:GC02P122419 HGNC:HGNC:12379 MIM:600575 neXtProt:NX_Q15631
PharmGKB:PA37047 InParanoid:Q15631 PhylomeDB:Q15631 ChiTaRS:TSN
EvolutionaryTrace:Q15631 GenomeRNAi:7247 NextBio:28337
ArrayExpress:Q15631 Bgee:Q15631 CleanEx:HS_TSN
Genevestigator:Q15631 GermOnline:ENSG00000211460 Uniprot:Q15631
Length = 228
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/142 (31%), Positives = 67/142 (47%)
Query: 77 SMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQ 136
S+ + F + + L +RE IR VV +E R + L VHQ ++ ++
Sbjct: 2 SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKA 61
Query: 137 VDGLKELYGRLAEVLCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEE 195
+ + L + + P E YYRFH WR Q +V L AF+ +LET L+ E
Sbjct: 62 REHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTE 121
Query: 196 KLGMN---QAEFALDIEDYLIG 214
LG+ + F LD+EDYL G
Sbjct: 122 ILGIEPDREKGFHLDVEDYLSG 143
>UNIPROTKB|Q71SY3 [details] [associations]
symbol:Tsn "Protein Tsn" species:10116 "Rattus norvegicus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR002848 InterPro:IPR016068 InterPro:IPR016069
Pfam:PF01997 RGD:621107 GO:GO:0043565 HSSP:Q62348 eggNOG:NOG268068
HOGENOM:HOG000198374 Gene3D:1.20.58.190 Gene3D:1.20.58.200
PANTHER:PTHR10741 SUPFAM:SSF74784 CTD:7247
GeneTree:ENSGT00390000014517 HOVERGEN:HBG000373 EMBL:CH474028
EMBL:AF262356 IPI:IPI00952348 RefSeq:NP_068530.1 UniGene:Rn.156195
SMR:Q71SY3 IntAct:Q71SY3 STRING:Q71SY3 Ensembl:ENSRNOT00000068524
GeneID:60381 KEGG:rno:60381 InParanoid:Q71SY3 NextBio:612071
Genevestigator:Q71SY3 Uniprot:Q71SY3
Length = 228
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/142 (31%), Positives = 67/142 (47%)
Query: 77 SMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQ 136
S+ + F + + L +RE IR VV +E R + L VHQ ++ ++
Sbjct: 2 SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLKA 61
Query: 137 VDGLKELYGRLAEVLCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEE 195
+ + L + + P E YYRFH WR Q +V L AF+ +LET L+ E
Sbjct: 62 REHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTE 121
Query: 196 KLGMN---QAEFALDIEDYLIG 214
LG+ + F LD+EDYL G
Sbjct: 122 ILGIEPDREKGFHLDVEDYLSG 143
>UNIPROTKB|Q08DM8 [details] [associations]
symbol:TSN "Translin" species:9913 "Bos taurus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR002848 InterPro:IPR016068
InterPro:IPR016069 Pfam:PF01997 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003729 GO:GO:0090305 GO:GO:0004519
eggNOG:NOG268068 HOGENOM:HOG000198374 Gene3D:1.20.58.190
Gene3D:1.20.58.200 PANTHER:PTHR10741 SUPFAM:SSF74784 EMBL:BT029902
EMBL:BC123663 IPI:IPI00710625 RefSeq:NP_001068890.1
UniGene:Bt.64624 ProteinModelPortal:Q08DM8 SMR:Q08DM8 STRING:Q08DM8
PRIDE:Q08DM8 Ensembl:ENSBTAT00000007959 GeneID:509943
KEGG:bta:509943 CTD:7247 GeneTree:ENSGT00390000014517
HOVERGEN:HBG000373 InParanoid:Q08DM8 OMA:VLIMASE OrthoDB:EOG4S7JQZ
NextBio:20869207 Uniprot:Q08DM8
Length = 228
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 44/142 (30%), Positives = 67/142 (47%)
Query: 77 SMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQ 136
S+ + F + + L +RE IR VV +E R + L VHQ ++ ++
Sbjct: 2 SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKA 61
Query: 137 VDGLKELYGRLAEVLCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEE 195
+ + L + + P E YYRFH WR Q +V L AF+ +LE+ L+ E
Sbjct: 62 REHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLESETLVTREAVTE 121
Query: 196 KLGMN---QAEFALDIEDYLIG 214
LG+ + F LD+EDYL G
Sbjct: 122 ILGIEPDREKGFHLDVEDYLSG 143
>UNIPROTKB|F1PFI5 [details] [associations]
symbol:TSN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR002848 InterPro:IPR016068
InterPro:IPR016069 Pfam:PF01997 GO:GO:0043565 Gene3D:1.20.58.190
Gene3D:1.20.58.200 PANTHER:PTHR10741 SUPFAM:SSF74784
GeneTree:ENSGT00390000014517 OMA:VLIMASE EMBL:AAEX03011863
Ensembl:ENSCAFT00000007575 Uniprot:F1PFI5
Length = 242
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 44/142 (30%), Positives = 67/142 (47%)
Query: 77 SMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQ 136
S+ + F + + L +RE IR VV +E R + L VHQ ++ ++
Sbjct: 17 SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKA 76
Query: 137 VDGLKELYGRLAEVLCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEE 195
+ + L + + P E YYRFH WR Q +V L AF+ +LE+ L+ E
Sbjct: 77 REHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLESETLVTREAVTE 136
Query: 196 KLGMN---QAEFALDIEDYLIG 214
LG+ + F LD+EDYL G
Sbjct: 137 ILGIEPDREKGFHLDVEDYLSG 158
>UNIPROTKB|F1RXY7 [details] [associations]
symbol:TSN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR002848
InterPro:IPR016068 Pfam:PF01997 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003729 Gene3D:1.20.58.190 PANTHER:PTHR10741
SUPFAM:SSF74784 GeneTree:ENSGT00390000014517 EMBL:CU655817
Ensembl:ENSSSCT00000017129 OMA:IDINIKP Uniprot:F1RXY7
Length = 172
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 44/142 (30%), Positives = 67/142 (47%)
Query: 77 SMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQ 136
S+ + F + + L +RE IR VV +E R + L VHQ ++ ++
Sbjct: 2 SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKA 61
Query: 137 VDGLKELYGRLAEVLCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEE 195
+ + L + + P E YYRFH WR Q +V L AF+ +LE+ L+ E
Sbjct: 62 REHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLESETLVTREAVTE 121
Query: 196 KLGMN---QAEFALDIEDYLIG 214
LG+ + F LD+EDYL G
Sbjct: 122 ILGIEPDREKGFHLDVEDYLSG 143
>UNIPROTKB|E9PGT1 [details] [associations]
symbol:TSN "Translin" species:9606 "Homo sapiens"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR002848 InterPro:IPR016068 InterPro:IPR016069
Pfam:PF01997 GO:GO:0043565 EMBL:AC018737 Gene3D:1.20.58.190
Gene3D:1.20.58.200 PANTHER:PTHR10741 SUPFAM:SSF74784
HGNC:HGNC:12379 ChiTaRS:TSN IPI:IPI00917623
ProteinModelPortal:E9PGT1 SMR:E9PGT1 PRIDE:E9PGT1
Ensembl:ENST00000409193 ArrayExpress:E9PGT1 Bgee:E9PGT1
Uniprot:E9PGT1
Length = 223
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 43/128 (33%), Positives = 60/128 (46%)
Query: 91 EAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQVDGLKELYGRLAEV 150
EA E IR VV +E R + L VHQ ++ ++ + + L +
Sbjct: 11 EAARSPEEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTVKTHLTSL 70
Query: 151 LCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEEKLGMN---QAEFAL 206
+ P E YYRFH WR Q +V L AF+ +LET L+ E LG+ + F L
Sbjct: 71 KTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHL 130
Query: 207 DIEDYLIG 214
D+EDYL G
Sbjct: 131 DVEDYLSG 138
>UNIPROTKB|P79769 [details] [associations]
symbol:TSN "Translin" species:9031 "Gallus gallus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002848 InterPro:IPR016068 InterPro:IPR016069
Pfam:PF01997 GO:GO:0005634 GO:GO:0043565 GO:GO:0003723
GO:GO:0090305 GO:GO:0004519 eggNOG:NOG268068 HOGENOM:HOG000198374
Gene3D:1.20.58.190 Gene3D:1.20.58.200 PANTHER:PTHR10741
SUPFAM:SSF74784 CTD:7247 HOVERGEN:HBG000373 EMBL:X95074
IPI:IPI00598812 RefSeq:NP_990404.1 UniGene:Gga.4067
ProteinModelPortal:P79769 SMR:P79769 STRING:P79769 PRIDE:P79769
GeneID:395955 KEGG:gga:395955 InParanoid:P79769 NextBio:20816020
Uniprot:P79769
Length = 229
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 44/142 (30%), Positives = 66/142 (46%)
Query: 77 SMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQ 136
S+ F + L +RE IR VV +E R M VHQ ++ +K +
Sbjct: 2 SVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKA 61
Query: 137 VDGLKELYGRLAEVLCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEE 195
+ + ++ + + P + YYRFH WR Q +V L +F+ +LET L+ E
Sbjct: 62 REHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAE 121
Query: 196 KLGMN---QAEFALDIEDYLIG 214
LG+ + F LDIEDYL G
Sbjct: 122 ILGIEADRERGFHLDIEDYLSG 143
>UNIPROTKB|H7C1D4 [details] [associations]
symbol:TSN "Translin" species:9606 "Homo sapiens"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR002848 InterPro:IPR016068 InterPro:IPR016069
Pfam:PF01997 GO:GO:0043565 EMBL:AC018737 Gene3D:1.20.58.190
Gene3D:1.20.58.200 PANTHER:PTHR10741 SUPFAM:SSF74784
HGNC:HGNC:12379 ChiTaRS:TSN ProteinModelPortal:H7C1D4 PRIDE:H7C1D4
Ensembl:ENST00000455432 Uniprot:H7C1D4
Length = 185
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 41/123 (33%), Positives = 58/123 (47%)
Query: 96 RERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQVDGLKELYGRLAEVLCECP 155
R IR VV +E R + L VHQ ++ ++ + + L + + P
Sbjct: 27 RGEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTVKTHLTSLKTKFP 86
Query: 156 GE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEEKLGMN---QAEFALDIEDY 211
E YYRFH WR Q +V L AF+ +LET L+ E LG+ + F LD+EDY
Sbjct: 87 AEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDY 146
Query: 212 LIG 214
L G
Sbjct: 147 LSG 149
>RGD|621107 [details] [associations]
symbol:Tsn "translin" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] InterPro:IPR002848 InterPro:IPR016068
InterPro:IPR016069 Pfam:PF01997 RGD:621107 GO:GO:0032403
GO:GO:0043565 HSSP:Q62348 HOGENOM:HOG000198374 Gene3D:1.20.58.190
Gene3D:1.20.58.200 PANTHER:PTHR10741 SUPFAM:SSF74784
HOVERGEN:HBG000373 OrthoDB:EOG4S7JQZ IPI:IPI00382182
UniGene:Rn.156195 EMBL:AY325258 ProteinModelPortal:Q7TP02
SMR:Q7TP02 STRING:Q7TP02 PRIDE:Q7TP02 InParanoid:Q7TP02
ArrayExpress:Q7TP02 Genevestigator:Q7TP02 Uniprot:Q7TP02
Length = 278
Score = 144 (55.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 99 IRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQVDGLKELYGRLAEVLCECPGE- 157
IR VV +E R + L VHQ ++ ++ + + L + + P E
Sbjct: 71 IRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLKAREHFGTVKTHLTSLKTKFPAEQ 130
Query: 158 YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEEKLGMN---QAEFALDIEDYLIG 214
YYRFH WR Q +V L AF+ +LET L+ E LG+ + F LD+EDYL G
Sbjct: 131 YYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSG 190
>UNIPROTKB|E9PT79 [details] [associations]
symbol:Tsn "Protein Tsn" species:10116 "Rattus norvegicus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR002848 InterPro:IPR016068 InterPro:IPR016069
Pfam:PF01997 RGD:621107 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003729 Gene3D:1.20.58.190 Gene3D:1.20.58.200
PANTHER:PTHR10741 SUPFAM:SSF74784 GeneTree:ENSGT00390000014517
OMA:VLIMASE IPI:IPI00382182 PRIDE:E9PT79 Ensembl:ENSRNOT00000044095
ArrayExpress:E9PT79 Uniprot:E9PT79
Length = 278
Score = 144 (55.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 40/120 (33%), Positives = 57/120 (47%)
Query: 99 IRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQVDGLKELYGRLAEVLCECPGE- 157
IR VV +E R + L VHQ ++ ++ + + L + + P E
Sbjct: 71 IRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLKAREHFGTVKTHLTSLKTKFPAEQ 130
Query: 158 YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEEKLGMN---QAEFALDIEDYLIG 214
YYRFH WR Q +V L AF+ +LET L+ E LG+ + F LD+EDYL G
Sbjct: 131 YYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSG 190
>ZFIN|ZDB-GENE-030131-6039 [details] [associations]
symbol:tsn "translin" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR002848 InterPro:IPR016068 InterPro:IPR016069
Pfam:PF01997 ZFIN:ZDB-GENE-030131-6039 GO:GO:0043565
eggNOG:NOG268068 HOGENOM:HOG000198374 Gene3D:1.20.58.190
Gene3D:1.20.58.200 PANTHER:PTHR10741 SUPFAM:SSF74784 CTD:7247
GeneTree:ENSGT00390000014517 HOVERGEN:HBG000373 OMA:VLIMASE
OrthoDB:EOG4S7JQZ EMBL:CR391905 EMBL:AL935048 EMBL:BC096804
EMBL:BC109403 IPI:IPI00496021 RefSeq:NP_001020623.1
UniGene:Dr.33507 SMR:Q4V9N1 STRING:Q4V9N1
Ensembl:ENSDART00000061299 GeneID:334107 KEGG:dre:334107
InParanoid:Q4V9N1 NextBio:20810267 Uniprot:Q4V9N1
Length = 227
Score = 135 (52.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 42/142 (29%), Positives = 64/142 (45%)
Query: 77 SMEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQ 136
S+ + F + L +RE IR VV +E R + L VHQ ++ K
Sbjct: 2 SVTEMFSYIQGFLSADQDIREDIRKVVQGLEQTAREILTVLQSVHQPTGFKDIPSKCLKA 61
Query: 137 VDGLKELYGRLAEVLCECPGE-YYRFHNDWRSETQTVVSLLAFMHWLETGKLLMHTEAEE 195
+ + E+ + P E YYR+H WR Q + L AF+ +LE+ L+ E +
Sbjct: 62 RELFCTVRNHTGELKTKFPVEQYYRYHELWRFVLQRLAFLAAFVVYLESEALVTREEVAK 121
Query: 196 KLGMN---QAEFALDIEDYLIG 214
L + + F LD+EDYL G
Sbjct: 122 ILAIEVDREKGFHLDVEDYLAG 143
>DICTYBASE|DDB_G0284837 [details] [associations]
symbol:tsnax "translin-associated protein X"
species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR002848
InterPro:IPR016068 InterPro:IPR016069 Pfam:PF01997
dictyBase:DDB_G0284837 EMBL:AAFI02000071 GO:GO:0043565
Gene3D:1.20.58.190 Gene3D:1.20.58.200 PANTHER:PTHR10741
SUPFAM:SSF74784 eggNOG:COG2178 OMA:CISSVGN RefSeq:XP_638400.1
ProteinModelPortal:Q54P58 EnsemblProtists:DDB0218639 GeneID:8624769
KEGG:ddi:DDB_G0284837 InParanoid:Q54P58 ProtClustDB:CLSZ2430226
Uniprot:Q54P58
Length = 284
Score = 117 (46.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 35/142 (24%), Positives = 69/142 (48%)
Query: 78 MEKQFEDFRVKLDEAGSLRERIRAVVNEIESITRLMHASLLHVHQSRPLSEVLEKPKAQV 137
++ F F KLDE RERI +I ++ + SLL E+L++ K +
Sbjct: 57 IKSMFSSFSKKLDEDNDRRERIVKNSRDITIASKRV-ISLLQRAVWEDKQEILKQSKQNL 115
Query: 138 DGLKELYGRLAEVLCECPGEYYRFHNDWRSETQTVVSLLAFMHWLETGKLL----MHTEA 193
+ L+G + + L + EY++F + + Q + ++F +++E G L+ +
Sbjct: 116 QPIFNLFGNIIKELDQ--QEYWKFQKAFTNGVQEYIEAVSFQYYIEFGALIPLDSILIPI 173
Query: 194 EEKLGMNQ-AEFALDIEDYLIG 214
+E L ++ +F + I+DY +G
Sbjct: 174 KEALNLDSLGQFNISIDDYALG 195
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 223 192 0.00096 110 3 11 22 0.43 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 593 (63 KB)
Total size of DFA: 173 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.59u 0.10s 18.69t Elapsed: 00:00:01
Total cpu time: 18.60u 0.10s 18.70t Elapsed: 00:00:01
Start: Fri May 10 18:16:38 2013 End: Fri May 10 18:16:39 2013