STRING 9.05 
  AT4G16060 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT4G16060
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast, chloroplast stroma; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 23 Blast hits to 22 proteins in 7 species- Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink). (289 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT4G16070
lipase class 3 family protein; lipase class 3 family protein; FUNCTIONS IN- triacylglycerol lip [...] (654 aa)
       0.970
AT2G43370
U1 small nuclear ribonucleoprotein 70 kDa, putative; U1 small nuclear ribonucleoprotein 70 kDa, [...] (333 aa)
       0.750
AT3G04160
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (712 aa)
       0.744
AT2G46200
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (382 aa)
       0.744
AT1G09230
RNA recognition motif (RRM)-containing protein; RNA recognition motif (RRM)-containing protein; [...] (442 aa)
       0.744
AT5G43065
transposable element gene; non-LTR retrotransposon family (LINE), has a 2.5e-20 P-value blast m [...] (1339 aa)
       0.675
AT5G42905
nucleic acid binding / ribonuclease H; nucleic acid binding / ribonuclease H; FUNCTIONS IN- rib [...] (258 aa)
       0.675
AT5G13655
transposable element gene; similar to unknown protein [Arabidopsis thaliana] (TAIR-AT4G11710.1) [...] (395 aa)
       0.675
AT2G33440
splicing factor family protein; splicing factor family protein; FUNCTIONS IN- RNA binding, nucl [...] (247 aa)
       0.659
AT5G06805
transposable element gene; similar to RNase H domain-containing protein [Arabidopsis thaliana] [...] (594 aa)
       0.651
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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