BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027484
MAAAAVFSYRIFCPIRCSAASNNHDPNKQKLNNISYSGNSTRSTKVDLHSQTTGVASTFV
ASVAAEKEGCRINEVQIRQNIPTKKQFVDPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTA
TLESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVE
IDTWVGASGKNGMRRDWLIRSQATGHIFARATRYIMYALEELL

High Scoring Gene Products

Symbol, full name Information P value
FATB
AT1G08510 		protein from Arabidopsis thaliana 1.9e-37
AT4G13050 protein from Arabidopsis thaliana 6.2e-30
FaTA
AT3G25110 		protein from Arabidopsis thaliana 1.0e-29

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027484
        (223 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2201786 - symbol:FATB "AT1G08510" species:3702...   402  1.9e-37   1
TAIR|locus:2123256 - symbol:AT4G13050 "AT4G13050" species...   331  6.2e-30   1
TAIR|locus:2090285 - symbol:FaTA "AT3G25110" species:3702...   329  1.0e-29   1


>TAIR|locus:2201786 [details] [associations]
            symbol:FATB "AT1G08510" species:3702 "Arabidopsis
            thaliana" [GO:0000036 "ACP phosphopantetheine attachment site
            binding involved in fatty acid biosynthetic process"
            evidence=ISS;IDA] [GO:0006633 "fatty acid biosynthetic process"
            evidence=ISS;IMP] [GO:0008152 "metabolic process" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016790 "thiolester
            hydrolase activity" evidence=IEA] [GO:0016297
            "acyl-[acyl-carrier-protein] hydrolase activity" evidence=IDA]
            [GO:0009536 "plastid" evidence=TAS] InterPro:IPR002864
            InterPro:IPR021113 Pfam:PF01643 Pfam:PF12590 EMBL:CP002684
            GO:GO:0009507 GO:GO:0009536 GO:GO:0000036 EMBL:AC006932
            UniGene:At.19907 GO:GO:0016297 EMBL:Z36910 EMBL:Z36911
            EMBL:AY054679 EMBL:AY059827 EMBL:AY064652 EMBL:BT008505
            IPI:IPI00516603 PIR:S69195 RefSeq:NP_172327.1 UniGene:At.46797
            ProteinModelPortal:Q9SJE2 STRING:Q9SJE2 PRIDE:Q9SJE2
            EnsemblPlants:AT1G08510.1 GeneID:837372 KEGG:ath:AT1G08510
            TAIR:At1g08510 InParanoid:Q9SJE2 KO:K10781 OMA:ECQHLLR
            PhylomeDB:Q9SJE2 ProtClustDB:PLN02370
            BioCyc:MetaCyc:AT1G08510-MONOMER Genevestigator:Q9SJE2
            Uniprot:Q9SJE2
        Length = 412

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 76/150 (50%), Positives = 106/150 (70%)

Query:    63 VAAEKEGCRINEVQIRQNIPTKKQFVDPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTATL 122
             +AAEK+   ++    R ++      VDP+  G I++ G+ +RQ   +RSYE+G D++A++
Sbjct:   104 LAAEKQWMMLDWKPRRSDM-----LVDPFGIGRIVQDGLVFRQNFSIRSYEIGADRSASI 158

Query:   123 ESILNLFQETALNHVWMSGLLSNGFGATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEID 182
             E+++N  QETALNHV  +GLL +GFG+T  M + NLIWVV+RMQV +D YP WG+VVE+D
Sbjct:   159 ETVMNHLQETALNHVKTAGLLGDGFGSTPEMFKKNLIWVVTRMQVVVDKYPTWGDVVEVD 218

Query:   183 TWVGASGKNGMRRDWLIRSQATGHIFARAT 212
             TWV  SGKNGMRRDWL+R   TG    RA+
Sbjct:   219 TWVSQSGKNGMRRDWLVRDCNTGETLTRAS 248


>TAIR|locus:2123256 [details] [associations]
            symbol:AT4G13050 "AT4G13050" species:3702 "Arabidopsis
            thaliana" [GO:0000036 "ACP phosphopantetheine attachment site
            binding involved in fatty acid biosynthetic process" evidence=ISS]
            [GO:0006633 "fatty acid biosynthetic process" evidence=IGI;ISS]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016790 "thiolester
            hydrolase activity" evidence=IEA] InterPro:IPR002864 Pfam:PF01643
            GO:GO:0009507 EMBL:CP002687 GO:GO:0006633 EMBL:AL161535
            EMBL:AL079349 GO:GO:0016295 GO:GO:0004320 GO:GO:0016296
            HOGENOM:HOG000237896 KO:K10782 ProtClustDB:CLSN2684548
            EMBL:BT024746 EMBL:AK118624 IPI:IPI00527422 PIR:T10207
            RefSeq:NP_193041.1 UniGene:At.33422 ProteinModelPortal:Q9SV64
            SMR:Q9SV64 STRING:Q9SV64 PRIDE:Q9SV64 EnsemblPlants:AT4G13050.1
            GeneID:826919 KEGG:ath:AT4G13050 TAIR:At4g13050 InParanoid:Q9SV64
            OMA:LRCHTPP PhylomeDB:Q9SV64 Genevestigator:Q9SV64 Uniprot:Q9SV64
        Length = 367

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 62/129 (48%), Positives = 87/129 (67%)

Query:    89 DPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFG 148
             D  R G ++E G  Y++  +VRSYEVG +KTAT+E+I NL QE A NHV   G  ++GF 
Sbjct:    69 DRLRFGRLMEDGFSYKEKFIVRSYEVGINKTATIETIANLLQEVACNHVQNVGFSTDGFA 128

Query:   149 ATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIF 208
              T  M + +LIWV +RM +EI  YP W +VVEI+TW  + G+ G RRDW+++  ATG + 
Sbjct:   129 TTLTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDCATGEVI 188

Query:   209 ARAT-RYIM 216
              RAT +++M
Sbjct:   189 GRATSKWVM 197


>TAIR|locus:2090285 [details] [associations]
            symbol:FaTA "AT3G25110" species:3702 "Arabidopsis
            thaliana" [GO:0000036 "ACP phosphopantetheine attachment site
            binding involved in fatty acid biosynthetic process" evidence=ISS]
            [GO:0006633 "fatty acid biosynthetic process" evidence=IGI;ISS]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016790 "thiolester
            hydrolase activity" evidence=IEA] [GO:0016297
            "acyl-[acyl-carrier-protein] hydrolase activity" evidence=IDA]
            InterPro:IPR002864 Pfam:PF01643 GO:GO:0009507 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006633 EMBL:AB026647 GO:GO:0016295
            GO:GO:0004320 GO:GO:0016296 EMBL:Z36912 EMBL:AK176105
            IPI:IPI00530028 PIR:S69197 RefSeq:NP_189147.1 UniGene:At.19907
            ProteinModelPortal:Q42561 SMR:Q42561 STRING:Q42561 PaxDb:Q42561
            PRIDE:Q42561 EnsemblPlants:AT3G25110.1 GeneID:822102
            KEGG:ath:AT3G25110 TAIR:At3g25110 eggNOG:COG3884
            HOGENOM:HOG000237896 InParanoid:Q42561 KO:K10782 OMA:DTRRLQK
            PhylomeDB:Q42561 ProtClustDB:CLSN2684548
            BioCyc:MetaCyc:AT3G25110-MONOMER Genevestigator:Q42561
            GO:GO:0016297 Uniprot:Q42561
        Length = 362

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 61/129 (47%), Positives = 85/129 (65%)

Query:    89 DPYRHGLIIEGGVGYRQTVVVRSYEVGPDKTATLESILNLFQETALNHVWMSGLLSNGFG 148
             D  R G + E G+ Y++  VVRSYEVG +KTAT+E+I NL QE   NH    G  ++GF 
Sbjct:    70 DQLRLGSLTEDGLSYKEKFVVRSYEVGSNKTATVETIANLLQEVGCNHAQSVGFSTDGFA 129

Query:   149 ATHGMMRNNLIWVVSRMQVEIDHYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGHIF 208
              T  M + +LIWV +RM +EI  YP WG+VVEI+TW  + G+ G RRDW+++   TG + 
Sbjct:   130 TTTTMRKLHLIWVTARMHIEIYKYPAWGDVVEIETWCQSEGRIGTRRDWILKDSVTGEVT 189

Query:   209 ARAT-RYIM 216
              RAT +++M
Sbjct:   190 GRATSKWVM 198


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      223       223   0.00098  112 3  11 22  0.37    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  188 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.94u 0.13s 19.07t   Elapsed:  00:00:01
  Total cpu time:  18.94u 0.13s 19.07t   Elapsed:  00:00:01
  Start:  Fri May 10 18:23:29 2013   End:  Fri May 10 18:23:30 2013

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