Your job contains 1 sequence.
>027488
MATLYAPSILASKPLLSSRPQLTLGLRVGSPTLRLPSRAHSRSILTVRAGATDSEYSSKR
SSSNEPRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMY
AFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYP
TYQPNKRKESKYVSKRYERRRDGPPAERRTRQAAGQSESASS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027488
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2200131 - symbol:MORF9 "multiple organellar RN... 771 1.5e-76 1
TAIR|locus:2083348 - symbol:MORF3 "multiple organellar RN... 443 8.4e-42 1
UNIPROTKB|Q2R8U1 - symbol:Os11g0216400 "Os11g0216400 prot... 430 2.0e-40 1
TAIR|locus:2051003 - symbol:DAL1 "differentiation and gre... 370 4.6e-34 1
TAIR|locus:2086310 - symbol:RIP1 "RNA-editing factor inte... 353 2.9e-32 1
TAIR|locus:2206639 - symbol:AT1G32580 "AT1G32580" species... 352 3.7e-32 1
TAIR|locus:2119782 - symbol:MORF1 "multiple organellar RN... 348 9.8e-32 1
TAIR|locus:2063389 - symbol:MORF6 "multiple organellar RN... 340 6.9e-31 1
TAIR|locus:2156344 - symbol:MORF4 "AT5G44780" species:370... 343 2.6e-30 1
TAIR|locus:2030200 - symbol:AT1G72530 "AT1G72530" species... 262 1.3e-22 1
TAIR|locus:2009625 - symbol:AT1G53260 species:3702 "Arabi... 167 2.0e-12 1
TAIR|locus:2088756 - symbol:AT3G20930 species:3702 "Arabi... 148 8.7e-09 1
>TAIR|locus:2200131 [details] [associations]
symbol:MORF9 "multiple organellar RNA editing factor 9"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:1900865
"chloroplast RNA modification" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006399 "tRNA metabolic process"
evidence=RCA] [GO:0009073 "aromatic amino acid family biosynthetic
process" evidence=RCA] [GO:0009658 "chloroplast organization"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=RCA] [GO:0045036 "protein targeting to
chloroplast" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] EMBL:CP002684
GO:GO:0009570 GO:GO:0009941 EMBL:AC011661 GO:GO:1900865
EMBL:BT005071 EMBL:AK117508 IPI:IPI00532519 RefSeq:NP_172610.1
UniGene:At.42133 IntAct:Q9LPZ1 STRING:Q9LPZ1 PRIDE:Q9LPZ1
ProMEX:Q9LPZ1 EnsemblPlants:AT1G11430.1 GeneID:837685
KEGG:ath:AT1G11430 TAIR:At1g11430 InParanoid:Q9LPZ1 OMA:NEQRETI
PhylomeDB:Q9LPZ1 ProtClustDB:CLSN2681966 ArrayExpress:Q9LPZ1
Genevestigator:Q9LPZ1 Uniprot:Q9LPZ1
Length = 232
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 147/202 (72%), Positives = 163/202 (80%)
Query: 25 GLRVG---SPTLRLPSRAHSRS-ILTVRAGATDXXXXXXXXXXNEPRETIMLPGCDYNHW 80
G+RVG +P LR S A SR + V+A D NE RETIMLPGCDYNHW
Sbjct: 31 GIRVGDSWTPLLRNISTAGSRRRVAIVKAATVDSDYSSKRSNSNEQRETIMLPGCDYNHW 90
Query: 81 LIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSE 140
LIVMEFPKDPAP+R+QMI+TYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCT+ EETSE
Sbjct: 91 LIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSE 150
Query: 141 KFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQPNKRKESKYVSKRYERR 200
KFKGLPGVLWVLPDSYIDVKNKDYGGDKY+NGEIIPCTYPTYQP +R +KY SKRYER+
Sbjct: 151 KFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKQRNNTKYQSKRYERK 210
Query: 201 RDGPPA--ERRTRQAAGQSESA 220
RDGPP +R+ RQ S+S+
Sbjct: 211 RDGPPPPEQRKPRQEPAASDSS 232
>TAIR|locus:2083348 [details] [associations]
symbol:MORF3 "multiple organellar RNA editing factor 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0050897
"cobalt ion binding" evidence=IDA] [GO:1900864 "mitochondrial RNA
modification" evidence=IMP] GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0050897 EMBL:AC023912
HOGENOM:HOG000272676 GO:GO:1900864 UniGene:At.18838
UniGene:At.74889 IPI:IPI00530723 RefSeq:NP_187335.1 STRING:Q9M7Y5
PRIDE:Q9M7Y5 EnsemblPlants:AT3G06790.1 GeneID:819864
KEGG:ath:AT3G06790 TAIR:At3g06790 InParanoid:Q9M7Y5
ProtClustDB:CLSN2684671 Genevestigator:Q9M7Y5 Uniprot:Q9M7Y5
Length = 244
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 99/206 (48%), Positives = 128/206 (62%)
Query: 8 SILASKPLLSSRPQLTLGL--RVGSPTLRL-PSRAHSRSILTVRAGATDXXXXXXXXXXN 64
S +S P LSSR + + L +V S L P +R T +G +
Sbjct: 23 SYSSSFPTLSSRSRFAMPLIEKVSSSRTSLGPCYISTRP-KTSGSGYSPLNDPSPNWSNR 81
Query: 65 EPRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFST 124
P+ETI+L GCDY HWLIVMEF DP PT E+MI +Y+ TL +VLG EEAKK +Y+ T
Sbjct: 82 PPKETILLDGCDYEHWLIVMEFT-DPKPTEEEMINSYVKTLTSVLGWQEEAKKKIYSVCT 140
Query: 125 TTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQP 184
+TYTGF +SEE S K K LPGVLWVLPDSY+DV NKDYGGD YV G++IP P Y+
Sbjct: 141 STYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVIP--RPQYRF 198
Query: 185 NKRKESKYVSK-RYERRRDGPPAERR 209
+++ ++ + RY+RRR+ ERR
Sbjct: 199 TEQRHTRPRPRPRYDRRRETMQVERR 224
>UNIPROTKB|Q2R8U1 [details] [associations]
symbol:Os11g0216400 "Os11g0216400 protein" species:39947
"Oryza sativa Japonica Group" [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] EMBL:DP000010 EMBL:AP008217
GO:GO:0004252 eggNOG:NOG12793 EMBL:CM000148 RefSeq:NP_001067510.1
UniGene:Os.39944 STRING:Q2R8U1 EnsemblPlants:LOC_Os11g11020.1
GeneID:4350082 KEGG:osa:4350082 OMA:LITMEFP ProtClustDB:CLSN2698490
Uniprot:Q2R8U1
Length = 374
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 89/173 (51%), Positives = 110/173 (63%)
Query: 35 LPSRAHSRSILTVRAGATDXXXXXXXXXXNEPRETIMLPGCDYNHWLIVMEFPKDPAPTR 94
LP+ S A D P E I+ GCDYNHWLI MEFP DP PTR
Sbjct: 50 LPAAGFRSSAAASAAARGDDYGRRDVDEKISPDE-ILFEGCDYNHWLITMEFP-DPKPTR 107
Query: 95 EQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPD 154
E+MIETYL TLA V+GS EEAKK MYAFSTTTY GFQ ++EE SEKF+GLPGV+++LPD
Sbjct: 108 EEMIETYLQTLAKVVGSYEEAKKRMYAFSTTTYVGFQAVMTEEMSEKFRGLPGVVFILPD 167
Query: 155 SYIDVKNKDYGGDKYVNGEIIPCTYPTY--QPNKRKESKYVSKRYERRRDGPP 205
SY+ + K+YGGDKY NG I P P + +P++ ++ Y+ +GPP
Sbjct: 168 SYLYPETKEYGGDKYENGVITPRPPPVHYSKPSRTDRNRNYRGNYQ---NGPP 217
>TAIR|locus:2051003 [details] [associations]
symbol:DAL1 "differentiation and greening-like 1"
species:3702 "Arabidopsis thaliana" [GO:0003674
"molecular_function" evidence=ND] [GO:0002103 "endonucleolytic
cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA,
4.5S-rRNA, 5S-rRNA)" evidence=IMP] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0006399 "tRNA metabolic process" evidence=RCA] [GO:0009658
"chloroplast organization" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009657 EMBL:AC002332
EMBL:AF446351 EMBL:AY097425 EMBL:AK228465 IPI:IPI00521047
PIR:D84745 PIR:T52623 RefSeq:NP_180901.1 UniGene:At.111
IntAct:O22793 STRING:O22793 PaxDb:O22793 PRIDE:O22793
EnsemblPlants:AT2G33430.1 GeneID:817907 KEGG:ath:AT2G33430
TAIR:At2g33430 eggNOG:NOG268944 HOGENOM:HOG000272676
InParanoid:O22793 OMA:YSRRREN PhylomeDB:O22793
ProtClustDB:CLSN2682809 ArrayExpress:O22793 Genevestigator:O22793
GO:GO:0002103 Uniprot:O22793
Length = 219
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 83/209 (39%), Positives = 115/209 (55%)
Query: 3 TLYAPSILASKPLLSSRPQLTLGLRVGSPTLRLPSRAHSRSILTVRAGATDXXXXXXXXX 62
T + L S L + P++ + G L +R S R+G+T
Sbjct: 8 TRHLTRALLSNVTLMAPPRIPSSVHYGGSRLGCSTRFFSIRCGANRSGSTYSPLNSGSNF 67
Query: 63 XNEPRETI--MLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMY 120
+ P + + PGCDY HWLIVM+ P T++QMI+ Y+ TLA V+GS EEAKK +Y
Sbjct: 68 SDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIY 127
Query: 121 AFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEII---PC 177
S Y GF C + EETS K +GLPGVL+VLPDSY+D +NKDYG + +VNGEI+ P
Sbjct: 128 NVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 187
Query: 178 TYPTYQPNKRKES---KYVSK-RYERRRD 202
+P ++ +Y + RY RRR+
Sbjct: 188 RQRRVEPQPQRAQDRPRYNDRTRYSRRRE 216
>TAIR|locus:2086310 [details] [associations]
symbol:RIP1 "RNA-editing factor interacting protein 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0050897 "cobalt ion
binding" evidence=IDA] [GO:0009451 "RNA modification" evidence=IMP]
[GO:0016554 "cytidine to uridine editing" evidence=IMP] [GO:0080156
"mitochondrial mRNA modification" evidence=IMP] GO:GO:0005739
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016554
GO:GO:0050897 EMBL:AP000370 GO:GO:0080156 EMBL:AF428427
IPI:IPI00532410 RefSeq:NP_566496.1 UniGene:At.24349
UniGene:At.67750 IntAct:Q9LKA5 STRING:Q9LKA5 PaxDb:Q9LKA5
PRIDE:Q9LKA5 EnsemblPlants:AT3G15000.1 GeneID:820729
KEGG:ath:AT3G15000 GeneFarm:775 TAIR:At3g15000 eggNOG:NOG243672
HOGENOM:HOG000243016 InParanoid:Q9LKA5 OMA:GAPPQNN PhylomeDB:Q9LKA5
ProtClustDB:CLSN2915005 Genevestigator:Q9LKA5 GermOnline:AT3G15000
Uniprot:Q9LKA5
Length = 395
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 79/224 (35%), Positives = 123/224 (54%)
Query: 1 MATLYAPSILASKPLLSSRPQLTLGLRVGSPTLRLPSRAHSRSILTVRAGATDXXXXXXX 60
++ L+ S +S PL S P +L L P + S +++V+ +T
Sbjct: 18 LSFLFTRSFASSAPLAKS-PASSL-LSRSRPLVAAFSSVFRGGLVSVKGLSTQATSSSLN 75
Query: 61 X-----XXNEPRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEA 115
P+ETI+L GCD+ HWL+V+E P PTR+++I++Y+ TLA ++GS +EA
Sbjct: 76 DPNPNWSNRPPKETILLDGCDFEHWLVVVE-PPQGEPTRDEIIDSYIKTLAQIVGSEDEA 134
Query: 116 KKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEII 175
+ +Y+ ST Y F VSE+ S K K L V WVLPDSY+DV+NKDYGG+ +++G+ +
Sbjct: 135 RMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAV 194
Query: 176 PCTYPTYQPNKRKESKYVSKRYERRRDGPPAERRTRQAAGQSES 219
P P Y + + ++R RR D P R+R + E+
Sbjct: 195 PYD-PKYHEEWIRNNARANER-NRRNDRPRNNDRSRNFERRREN 236
>TAIR|locus:2206639 [details] [associations]
symbol:AT1G32580 "AT1G32580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 EMBL:AC055769
HOGENOM:HOG000272676 ProtClustDB:CLSN2682809 EMBL:AY063995
EMBL:AY096695 IPI:IPI00520554 PIR:D86451 RefSeq:NP_174536.1
UniGene:At.27111 IntAct:Q9C7Y2 STRING:Q9C7Y2 PaxDb:Q9C7Y2
PRIDE:Q9C7Y2 EnsemblPlants:AT1G32580.1 GeneID:840152
KEGG:ath:AT1G32580 TAIR:At1g32580 eggNOG:NOG251524 OMA:GENATKQ
PhylomeDB:Q9C7Y2 ArrayExpress:Q9C7Y2 Genevestigator:Q9C7Y2
Uniprot:Q9C7Y2
Length = 229
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 68/141 (48%), Positives = 92/141 (65%)
Query: 71 MLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGF 130
+ PGCDY HWLIVM+ P T++QMI+ Y+ TLA ++GS EEAKK +Y S Y GF
Sbjct: 87 LFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGF 146
Query: 131 QCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQPNKRKES 190
C + EETS K +GLPGVL++LPDSY+D +NKDYG + +VNGEI+ +P +R+
Sbjct: 147 GCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGAELFVNGEIVQ------RPPERQR- 199
Query: 191 KYVSKRYERRRDGPPAERRTR 211
K + +R D P +TR
Sbjct: 200 KIIELTTQRTNDKPKYHDKTR 220
>TAIR|locus:2119782 [details] [associations]
symbol:MORF1 "multiple organellar RNA editing factor 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:1900864 "mitochondrial RNA modification"
evidence=IMP] [GO:1900865 "chloroplast RNA modification"
evidence=IMP] GO:GO:0005739 GO:GO:0009507 EMBL:CP002687
EMBL:AL021637 EMBL:AL161552 HOGENOM:HOG000243016 EMBL:BT002761
IPI:IPI00534157 PIR:T04886 RefSeq:NP_193735.1 UniGene:At.32756
STRING:O49429 PaxDb:O49429 PRIDE:O49429 EnsemblPlants:AT4G20020.1
GeneID:827747 KEGG:ath:AT4G20020 TAIR:At4g20020 eggNOG:NOG285776
InParanoid:O49429 OMA:HWLITMD PhylomeDB:O49429
ProtClustDB:CLSN2685724 Genevestigator:O49429 GO:GO:1900865
GO:GO:1900864 Uniprot:O49429
Length = 419
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 73/151 (48%), Positives = 94/151 (62%)
Query: 68 ETIMLPGCDYNHWLIVMEFPKDPAP-TREQMIETYLNTLATVLG-SMEEAKKNMYAFSTT 125
+T++ GCDYNHWLI M+F K+ P + E+M+ Y T A LG S+EEAK+ MYA STT
Sbjct: 78 DTVLFEGCDYNHWLITMDFSKEETPKSPEEMVAAYEETCAQGLGISVEEAKQRMYACSTT 137
Query: 126 TYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQPN 185
TY GFQ ++E+ SEKFK LPGV+++LPDSYID +NK+YGGDKY NG I P
Sbjct: 138 TYQGFQAIMTEQESEKFKDLPGVVFILPDSYIDPQNKEYGGDKYENGVITHRPPPIQSGR 197
Query: 186 KRKESKYVSKRYERRRDGPPAERRTRQAAGQ 216
R ++ R GP +R Q Q
Sbjct: 198 ARPRPRF--DRSGGGSGGPQNFQRNTQYGQQ 226
>TAIR|locus:2063389 [details] [associations]
symbol:MORF6 "multiple organellar RNA editing factor 6"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004667
HOGENOM:HOG000272676 ProtClustDB:CLSN2682809 EMBL:AY072439
EMBL:BT003414 IPI:IPI00523082 PIR:B84766 RefSeq:NP_181067.1
UniGene:At.37691 IntAct:O82169 PaxDb:O82169 PRIDE:O82169
EnsemblPlants:AT2G35240.1 GeneID:818091 KEGG:ath:AT2G35240
TAIR:At2g35240 eggNOG:NOG317940 OMA:SPTIFHA PhylomeDB:O82169
ArrayExpress:O82169 Genevestigator:O82169 Uniprot:O82169
Length = 232
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 84/208 (40%), Positives = 113/208 (54%)
Query: 6 APSILASKPLLSSRPQLTLGLRVGS-PTLRLPSRAHSRSILTVRAGATDXXXXXXXXXXN 64
+PS L S L+S R T+ VG P L + +R + G+
Sbjct: 26 SPSPLPSH-LISRRFSPTIFHAVGYIPALTRFTTIRTR--MDRSGGSYSPLKSGSNFSDR 82
Query: 65 EPRETIML-PGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFS 123
P E L PGCDY HWLIVME P ++QMI+ Y+ TLA ++GS EEA+K +Y S
Sbjct: 83 PPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTLAKIVGSEEEARKKIYNVS 142
Query: 124 TTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQ 183
Y GF C + EETS K +GLPGVL+VLPDSY+D + KDYG + +VNGE++P +
Sbjct: 143 CERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGAELFVNGEVVP------R 196
Query: 184 PNKRKESKYVSKRYERRRDGPPAERRTR 211
P +R+ + V +R D P R R
Sbjct: 197 PPERQR-RMVELTNQRGSDKPKYHDRIR 223
>TAIR|locus:2156344 [details] [associations]
symbol:MORF4 "AT5G44780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0048481 "ovule development" evidence=RCA]
EMBL:CP002688 GenomeReviews:BA000015_GR eggNOG:NOG12793
EMBL:AB016874 EMBL:AC002342 HOGENOM:HOG000243016 EMBL:BT012578
EMBL:AK221549 IPI:IPI00548630 RefSeq:NP_199291.1 UniGene:At.30053
PaxDb:O48582 PRIDE:O48582 EnsemblPlants:AT5G44780.1 GeneID:834507
KEGG:ath:AT5G44780 TAIR:At5g44780 InParanoid:O48582 OMA:RMSIPGQ
PhylomeDB:O48582 ProtClustDB:CLSN2916734 Genevestigator:O48582
Uniprot:O48582
Length = 723
Score = 343 (125.8 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 76/149 (51%), Positives = 95/149 (63%)
Query: 74 GCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLG-SMEEAKKNMYAFSTTTYTGFQC 132
GCD+NHWLI M FPKD P+RE+MI + T A L S+EEAKK +YA TT+Y GFQ
Sbjct: 79 GCDFNHWLITMNFPKDNLPSREEMISIFEQTCAKGLAISLEEAKKKIYAICTTSYQGFQA 138
Query: 133 TVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIP--CTYPTYQ--PNKRK 188
T++ EKF+ LPGV +++PDSYIDV+NK YGGDKY NG I P PT + + +K
Sbjct: 139 TMTIGEVEKFRDLPGVQYIIPDSYIDVENKVYGGDKYENGVITPGPVPVPTKEGFDSLKK 198
Query: 189 ESKYVSKRYERRRDGPPAERRTR-QAAGQ 216
ESK + E PP E +T Q GQ
Sbjct: 199 ESKPEQEEAEIILT-PPDEGKTSGQVQGQ 226
>TAIR|locus:2030200 [details] [associations]
symbol:AT1G72530 "AT1G72530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 IPI:IPI00938919 RefSeq:NP_001154468.1
UniGene:At.50962 EnsemblPlants:AT1G72530.2 GeneID:843585
KEGG:ath:AT1G72530 OMA:YDEKYHA ArrayExpress:F4IDD2 Uniprot:F4IDD2
Length = 192
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 55/142 (38%), Positives = 88/142 (61%)
Query: 71 MLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGF 130
++ GCDY HWL++M+ P + PTR ++++++ TLA LGS EEAK+++Y+ ST Y F
Sbjct: 48 LVEGCDYKHWLVLMK-PPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAF 106
Query: 131 QCTVSEETSEKFKGLPGVLWVLPDSYI-DVKNKDYG----GDKYVNGEIIPCTYPTY--- 182
C + E + K + LP V WVLPDS+I D N+ YG G+ +V+GE++P +
Sbjct: 107 GCRIHEPLTYKIRSLPDVKWVLPDSFIVDGDNR-YGVFFAGEPFVDGEVVPYDEKYHADW 165
Query: 183 ---QPNKRKESKYVSKRYERRR 201
Q ++ +S V K++ R+R
Sbjct: 166 LRDQTDEDAKSGVVKKKHRRKR 187
>TAIR|locus:2009625 [details] [associations]
symbol:AT1G53260 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] EMBL:CP002684 UniGene:At.50949
EMBL:AY954765 IPI:IPI00546248 RefSeq:NP_175733.2 PRIDE:Q58G44
EnsemblPlants:AT1G53260.1 GeneID:841759 KEGG:ath:AT1G53260
OMA:PPPNMNQ Genevestigator:Q58G44 Uniprot:Q58G44
Length = 271
Score = 167 (63.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 119 MYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCT 178
+Y+ S Y F VSE+ S K K LP V WVLPDSY+D KNKDYGG+ +++G+ +P
Sbjct: 3 IYSVSHKCYFAFGALVSEDLSHKIKELPKVKWVLPDSYLDGKNKDYGGEPFIDGKAVPYD 62
Query: 179 YPTY 182
P Y
Sbjct: 63 -PKY 65
>TAIR|locus:2088756 [details] [associations]
symbol:AT3G20930 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HSSP:Q9V535 eggNOG:COG0724 EMBL:AY099828
EMBL:AY084565 EMBL:BT002195 IPI:IPI00537313 RefSeq:NP_566672.1
UniGene:At.43817 ProteinModelPortal:Q8L440 SMR:Q8L440 PRIDE:Q8L440
EnsemblPlants:AT3G20930.1 GeneID:821642 KEGG:ath:AT3G20930
TAIR:At3g20930 InParanoid:Q8L440 OMA:KAQMVDH PhylomeDB:Q8L440
ProtClustDB:CLSN2688611 ArrayExpress:Q8L440 Genevestigator:Q8L440
Uniprot:Q8L440
Length = 374
Score = 148 (57.2 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 26/88 (29%), Positives = 53/88 (60%)
Query: 78 NHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEE 137
++W+++++ P ++ M++ Y+ LA VLG+ ++A+ ++Y S T+ GF C + E+
Sbjct: 71 SYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCHIDED 130
Query: 138 TSEKFKGLPGVLWVLPDSYIDVKNKDYG 165
S + LPGV+ + P+ + K+YG
Sbjct: 131 ASRQLASLPGVVSIRPEQDYSSEKKNYG 158
Score = 148 (57.2 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 79 HWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEET 138
HW++ ++ P T+ QM++ + L+ VL + ++A+ +Y S + GF C + E +
Sbjct: 175 HWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERS 234
Query: 139 SEKFKGLPGVLWVLPDSYIDVKNKDYGGD 167
+ + G+PGVL V+PD+ + NKDY GD
Sbjct: 235 AVELAGVPGVLAVVPDNSFESLNKDYEGD 263
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 212 0.00083 112 3 11 23 0.42 33
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 604 (64 KB)
Total size of DFA: 170 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 19.11u 0.07s 19.18t Elapsed: 00:00:02
Total cpu time: 19.11u 0.07s 19.18t Elapsed: 00:00:04
Start: Mon May 20 23:14:14 2013 End: Mon May 20 23:14:18 2013