Query 027490
Match_columns 222
No_of_seqs 203 out of 1334
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 18:01:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027490.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027490hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 4.9E-44 1.7E-48 316.0 11.3 160 31-190 42-273 (340)
2 2zz9_A Aquaporin-4; water tran 100.0 1.4E-42 4.7E-47 303.8 9.9 158 32-189 4-233 (301)
3 1j4n_A Aquaporin 1; membrane p 100.0 6.9E-43 2.4E-47 302.5 4.8 158 33-190 3-237 (271)
4 3gd8_A Aquaporin-4; proton exc 100.0 1E-41 3.6E-46 287.6 8.1 150 39-188 2-223 (223)
5 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 2E-41 7E-46 292.4 9.4 156 33-190 4-230 (266)
6 2b6o_A Aquaporin-0, lens fiber 100.0 1.5E-41 5.3E-46 292.9 8.2 155 33-189 2-226 (263)
7 2w2e_A AQY1, aquaporin, aquapo 100.0 3.7E-41 1.3E-45 292.5 9.8 154 38-191 42-269 (279)
8 3cn5_A Aquaporin; membrane pro 100.0 1.5E-41 5.1E-46 297.8 6.1 159 31-189 51-290 (304)
9 3llq_A Aquaporin Z 2; aquapori 100.0 1.4E-40 4.7E-45 285.4 5.9 150 37-186 26-253 (256)
10 1ldf_A Glycerol uptake facilit 100.0 3E-40 1E-44 287.4 8.0 155 37-191 4-260 (281)
11 2o9g_A Aquaporin Z; integral m 100.0 7.5E-40 2.6E-44 278.1 6.5 150 39-188 3-232 (234)
12 3c02_A Aquaglyceroporin; membr 100.0 4E-40 1.4E-44 283.5 2.6 155 37-191 6-247 (258)
13 2f2b_A Aquaporin AQPM; protein 100.0 4.5E-37 1.5E-41 262.8 8.0 149 39-187 3-245 (246)
14 2f2b_A Aquaporin AQPM; protein 99.2 7.7E-11 2.6E-15 100.2 9.8 90 38-132 141-240 (246)
15 2b6o_A Aquaporin-0, lens fiber 98.8 4E-08 1.4E-12 84.2 10.5 89 39-132 126-219 (263)
16 2w2e_A AQY1, aquaporin, aquapo 98.7 3.8E-08 1.3E-12 85.0 9.7 92 39-135 167-263 (279)
17 3llq_A Aquaporin Z 2; aquapori 98.7 3E-08 1E-12 84.7 6.8 89 38-132 155-249 (256)
18 3d9s_A Aquaporin-5, AQP-5; aqu 98.7 7.8E-08 2.7E-12 82.5 9.3 90 39-133 128-223 (266)
19 3iyz_A Aquaporin-4; water tran 98.7 1.1E-07 3.6E-12 84.1 10.2 91 39-134 172-267 (340)
20 3cn5_A Aquaporin; membrane pro 98.7 1.8E-08 6E-13 88.1 5.1 95 39-134 183-285 (304)
21 2zz9_A Aquaporin-4; water tran 98.7 8.4E-08 2.9E-12 83.6 9.3 90 39-133 133-227 (301)
22 2o9g_A Aquaporin Z; integral m 98.7 5.5E-08 1.9E-12 82.0 7.9 90 38-133 132-227 (234)
23 3gd8_A Aquaporin-4; proton exc 98.6 1.5E-07 5.1E-12 78.8 9.3 89 39-132 124-217 (223)
24 1ldf_A Glycerol uptake facilit 98.5 2.8E-07 9.5E-12 79.6 9.1 71 39-112 144-214 (281)
25 1j4n_A Aquaporin 1; membrane p 98.5 2.1E-07 7.3E-12 80.0 8.0 87 41-132 138-229 (271)
26 3c02_A Aquaglyceroporin; membr 98.5 1.7E-07 5.9E-12 80.0 6.7 90 41-132 135-238 (258)
27 3s2u_A UDP-N-acetylglucosamine 47.6 2.7 9.2E-05 36.3 -1.0 20 93-112 9-28 (365)
28 3kcu_A Probable formate transp 41.3 1.3E+02 0.0044 25.3 8.6 42 74-118 68-109 (285)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=4.9e-44 Score=316.04 Aligned_cols=160 Identities=31% Similarity=0.535 Sum_probs=140.5
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHHHHHHhhhhccc--CcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHH
Q 027490 31 VWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSA--YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAF 108 (222)
Q Consensus 31 ~~~~~~~~~l~r~~laEfigTfllvf~g~~~~~~~~--~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~ 108 (222)
..++.+++.+||++++||+|||+|+|+++++++... ......+++.++++||+++++++|+++++||||+|||||+++
T Consensus 42 ~~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal 121 (340)
T 3iyz_A 42 AFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAM 121 (340)
T ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHH
Confidence 566788899999999999999999999999987332 122345788899999999999999999999999999999999
Q ss_pred HHHhcCCccc----------------------------------------------------------------------
Q 027490 109 AAVRHFPWKQ---------------------------------------------------------------------- 118 (222)
Q Consensus 109 ~l~g~~~~~~---------------------------------------------------------------------- 118 (222)
++.|+++|.+
T Consensus 122 ~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~ 201 (340)
T 3iyz_A 122 VCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTD 201 (340)
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 9999999887
Q ss_pred ccchhHHHHHHHHHHHhhcccccCCCCccccccccccccccCCCceEEeeecchHHHHHHHHHHHHHhcCCC
Q 027490 119 IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDK 190 (222)
Q Consensus 119 ~~~~~g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~~~~~~wvy~v~P~~Ga~~a~~~y~~~~~~~~ 190 (222)
...+.|+.||+++.+++++++++||++||||||||||++.+.|+++||||+||++|+++|+++|++++.++.
T Consensus 202 ~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 202 VTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred cccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCCh
Confidence 012456778888877778888999999999999999999999999999999999999999999999987654
No 2
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=1.4e-42 Score=303.82 Aligned_cols=158 Identities=31% Similarity=0.542 Sum_probs=135.0
Q ss_pred hhccCChhHHHHHHHHHHHHHHHHHHHHhhhhcccC--cccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHH
Q 027490 32 WNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAY--DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFA 109 (222)
Q Consensus 32 ~~~~~~~~l~r~~laEfigTfllvf~g~~~~~~~~~--~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~ 109 (222)
.++.++++++|++++||+|||+|+|+++++++.... .....+++.++++||+++++++|+++++||||+|||||++++
T Consensus 4 ~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 83 (301)
T 2zz9_A 4 FKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMV 83 (301)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHH
Confidence 467788999999999999999999999998764321 223456788999999999999999999999999999999999
Q ss_pred HHhcCCccc----------------------------------------------------------------------c
Q 027490 110 AVRHFPWKQ----------------------------------------------------------------------I 119 (222)
Q Consensus 110 l~g~~~~~~----------------------------------------------------------------------~ 119 (222)
+.|++||.+ .
T Consensus 84 ~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~ 163 (301)
T 2zz9_A 84 CTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDV 163 (301)
T ss_dssp HTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCC
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 999999987 0
Q ss_pred cchhHHHHHHHHHHHhhcccccCCCCccccccccccccccCCCceEEeeecchHHHHHHHHHHHHHhcCC
Q 027490 120 GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETD 189 (222)
Q Consensus 120 ~~~~g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~~~~~~wvy~v~P~~Ga~~a~~~y~~~~~~~ 189 (222)
..+.|+.||+++.+++++++++||++||||||||||++.+.|.++||||+||++|+++|+++|++++.++
T Consensus 164 ~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~ 233 (301)
T 2zz9_A 164 TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 233 (301)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred cchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCc
Confidence 1245678888887777888889999999999999999999999999999999999999999999998654
No 3
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=6.9e-43 Score=302.50 Aligned_cols=158 Identities=31% Similarity=0.512 Sum_probs=137.0
Q ss_pred hccCChhHHHHHHHHHHHHHHHHHHHHhhhhccc----C---cccccchhhHHHHHHHHHHHHHHHhcccCccccchHHH
Q 027490 33 NEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSA----Y---DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVT 105 (222)
Q Consensus 33 ~~~~~~~l~r~~laEfigTfllvf~g~~~~~~~~----~---~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVT 105 (222)
+|..++.++|++++||+|||+|+|+++++++... . .+...+++.++++||+++++++|+++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 3455677999999999999999999999876321 1 11223578899999999999999999999999999999
Q ss_pred HHHHHHhcCCccc-------------------------------------------------------------------
Q 027490 106 LAFAAVRHFPWKQ------------------------------------------------------------------- 118 (222)
Q Consensus 106 la~~l~g~~~~~~------------------------------------------------------------------- 118 (222)
+++++.|+++|.+
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~ 162 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRR 162 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999999987
Q ss_pred ---ccchhHHHHHHHHHHHhhcccccCCCCccccccccccccccCCCceEEeeecchHHHHHHHHHHHHHhcCCC
Q 027490 119 ---IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDK 190 (222)
Q Consensus 119 ---~~~~~g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~~~~~~wvy~v~P~~Ga~~a~~~y~~~~~~~~ 190 (222)
...+.|+.||+++.++++.++++||++||||||||||++++.|+++||||+||++|+++|+++|++++.++.
T Consensus 163 ~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 163 RRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 123567889999888888888899999999999999999999999999999999999999999999987543
No 4
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=287.58 Aligned_cols=150 Identities=32% Similarity=0.541 Sum_probs=132.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhccc--CcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCc
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSA--YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPW 116 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~--~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~ 116 (222)
++||++++||+|||+|+++++++++... .+....+++.++++||+++++.+|+++++||||+|||||+++++.|+++|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 5799999999999999999999877422 22234578899999999999999999999999999999999999999999
Q ss_pred cc----------------------------------------------------------------------ccchhHHH
Q 027490 117 KQ----------------------------------------------------------------------IGELAGIA 126 (222)
Q Consensus 117 ~~----------------------------------------------------------------------~~~~~g~~ 126 (222)
.+ ...+.|+.
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~ 161 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALA 161 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCccHH
Confidence 87 12346788
Q ss_pred HHHHHHHHhhcccccCCCCccccccccccccccCCCceEEeeecchHHHHHHHHHHHHHhcC
Q 027490 127 VGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRET 188 (222)
Q Consensus 127 iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~~~~~~wvy~v~P~~Ga~~a~~~y~~~~~~ 188 (222)
||+++.+.++.++++||++||||||||||+++++|+++||||+||++|+++++++|++++.+
T Consensus 162 iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 162 IGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 88888877788888999999999999999999999999999999999999999999998753
No 5
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=292.41 Aligned_cols=156 Identities=31% Similarity=0.479 Sum_probs=138.7
Q ss_pred hccCChhHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHh
Q 027490 33 NEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVR 112 (222)
Q Consensus 33 ~~~~~~~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g 112 (222)
+|..+++++|++++||+|||+|+|++++++... .. ...+++.+++++|+++++++|+++++||||+|||||+++++.|
T Consensus 4 ~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~-~~-~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g 81 (266)
T 3d9s_A 4 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW-PS-ALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGN 81 (266)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC-SS-SCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTS
T ss_pred hhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCC-CC-CCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhc
Confidence 567788999999999999999999999987532 22 2356788999999999999999999999999999999999999
Q ss_pred cCCccc----------------------------------------------------------------------ccch
Q 027490 113 HFPWKQ----------------------------------------------------------------------IGEL 122 (222)
Q Consensus 113 ~~~~~~----------------------------------------------------------------------~~~~ 122 (222)
+++|.+ ...+
T Consensus 82 ~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~ 161 (266)
T 3d9s_A 82 QISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGS 161 (266)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccch
Confidence 999987 1235
Q ss_pred hHHHHHHHHHHHhhcccccCCCCccccccccccccccCCCc-eEEeeecchHHHHHHHHHHHHHhcCCC
Q 027490 123 AGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKG-IWVYLVGPVTGTFMGAWSYNMIRETDK 190 (222)
Q Consensus 123 ~g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~~~~~-~wvy~v~P~~Ga~~a~~~y~~~~~~~~ 190 (222)
.|+.||+++.+.++.++++||++||||||||||++++.|++ +||||+||++|+++|+++|++++.++.
T Consensus 162 ~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 230 (266)
T 3d9s_A 162 PALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 230 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCc
Confidence 67889998888888899999999999999999999999998 999999999999999999999987543
No 6
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=1.5e-41 Score=292.89 Aligned_cols=155 Identities=34% Similarity=0.513 Sum_probs=136.4
Q ss_pred hccCChhHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHh
Q 027490 33 NEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVR 112 (222)
Q Consensus 33 ~~~~~~~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g 112 (222)
+|..+++++|++++||+|||+|+|++++++... .....+++.+++++|+++++.+|+++++||||+|||||+++++.|
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~--~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g 79 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRW--APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGS 79 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTT
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhc
Confidence 356677899999999999999999999987532 223346778999999999999999999999999999999999999
Q ss_pred cCCccc----------------------------------------------------------------------ccch
Q 027490 113 HFPWKQ----------------------------------------------------------------------IGEL 122 (222)
Q Consensus 113 ~~~~~~----------------------------------------------------------------------~~~~ 122 (222)
+++|.+ ...+
T Consensus 80 ~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~ 159 (263)
T 2b6o_A 80 QMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGS 159 (263)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccc
Confidence 999887 1235
Q ss_pred hHHHHHHHHHHHhhcccccCCCCccccccccccccccCCCceEEeeecchHHHHHHHHHHHHHhcCC
Q 027490 123 AGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETD 189 (222)
Q Consensus 123 ~g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~~~~~~wvy~v~P~~Ga~~a~~~y~~~~~~~ 189 (222)
.|+.||+++.++++.++++||++||||||||||+++++|+++||||+||++|+++|+++|++++.++
T Consensus 160 ~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 160 VALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp HHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 6788999999999999999999999999999999999999999999999999999999999998654
No 7
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=3.7e-41 Score=292.46 Aligned_cols=154 Identities=25% Similarity=0.421 Sum_probs=133.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhc-cc------CcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHH
Q 027490 38 PGFLRKVIAEIIATYLLVFVTCGSAAL-SA------YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAA 110 (222)
Q Consensus 38 ~~l~r~~laEfigTfllvf~g~~~~~~-~~------~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l 110 (222)
++.+|++++||+|||+|+|++++++.. .. ......+++.++++||+++++++|+++++||||+|||||+++++
T Consensus 42 ~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 121 (279)
T 2w2e_A 42 RNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHH
Confidence 367899999999999999999987432 11 11223467789999999999999999999999999999999999
Q ss_pred HhcCCccc------------------------------------------------------------------ccchhH
Q 027490 111 VRHFPWKQ------------------------------------------------------------------IGELAG 124 (222)
Q Consensus 111 ~g~~~~~~------------------------------------------------------------------~~~~~g 124 (222)
.|+++|.+ ...+.|
T Consensus 122 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~~~~~p 201 (279)
T 2w2e_A 122 ARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWFAP 201 (279)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTTGGGHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCcHH
Confidence 99999987 123678
Q ss_pred HHHHHHHHHHhhcccccCCCCccccccccccccccCC-CceEEeeecchHHHHHHHHHHHHHhcCCCC
Q 027490 125 IAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFY-KGIWVYLVGPVTGTFMGAWSYNMIRETDKP 191 (222)
Q Consensus 125 ~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~~~-~~~wvy~v~P~~Ga~~a~~~y~~~~~~~~~ 191 (222)
+.||+++++.++.++++||++||||||||||++++.| +++||||+||++|+++|+++|++++..+.+
T Consensus 202 l~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~ 269 (279)
T 2w2e_A 202 FVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQ 269 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 8899999999999999999999999999999998765 689999999999999999999999876654
No 8
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=1.5e-41 Score=297.80 Aligned_cols=159 Identities=30% Similarity=0.460 Sum_probs=138.5
Q ss_pred hhhccCChhHHHHHHHHHHHHHHHHHHHHhhhhccc---CcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHH
Q 027490 31 VWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSA---YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLA 107 (222)
Q Consensus 31 ~~~~~~~~~l~r~~laEfigTfllvf~g~~~~~~~~---~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla 107 (222)
+.+|..+++++|++++||+|||+|+|+++++++... ......+++.++++||+++++++|+++++||||+|||||++
T Consensus 51 ~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla 130 (304)
T 3cn5_A 51 DLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFG 130 (304)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHH
T ss_pred CccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHH
Confidence 567888889999999999999999999999876321 22334568889999999999999999999999999999999
Q ss_pred HHHHhcCCccc---------------------------------------------------------------------
Q 027490 108 FAAVRHFPWKQ--------------------------------------------------------------------- 118 (222)
Q Consensus 108 ~~l~g~~~~~~--------------------------------------------------------------------- 118 (222)
+++.|+++|.+
T Consensus 131 ~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~ 210 (304)
T 3cn5_A 131 LFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKR 210 (304)
T ss_dssp HHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCcc
Confidence 99999999987
Q ss_pred --ccc----hhHHHHHHHHHHHhhcccccCCCCcccccccccccc---ccCCCceEEeeecchHHHHHHHHHHHHHhcCC
Q 027490 119 --IGE----LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA---SSFYKGIWVYLVGPVTGTFMGAWSYNMIRETD 189 (222)
Q Consensus 119 --~~~----~~g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~---~~~~~~~wvy~v~P~~Ga~~a~~~y~~~~~~~ 189 (222)
.+. +.|+.||+++++..+..+++||++||||||||||++ .+.|+++||||+||++|+++|+++|++++.++
T Consensus 211 ~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 211 SARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp ESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred CCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 011 778999999999999999999999999999999999 56789999999999999999999999997654
No 9
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.4e-40 Score=285.35 Aligned_cols=150 Identities=35% Similarity=0.600 Sum_probs=128.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhccc-CcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCC
Q 027490 37 PPGFLRKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFP 115 (222)
Q Consensus 37 ~~~l~r~~laEfigTfllvf~g~~~~~~~~-~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~ 115 (222)
+++++|++++||+|||+|+|++++++.... ..+...+++.++++||+++++++|+++++||||+|||||+++++.|++|
T Consensus 26 ~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 105 (256)
T 3llq_A 26 SYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFP 105 (256)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCC
Confidence 467899999999999999999999876332 2233467889999999999999999999999999999999999999999
Q ss_pred ccc---------------------------------------------------------------------------cc
Q 027490 116 WKQ---------------------------------------------------------------------------IG 120 (222)
Q Consensus 116 ~~~---------------------------------------------------------------------------~~ 120 (222)
|.+ ..
T Consensus 106 ~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~~~ 185 (256)
T 3llq_A 106 ASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPA 185 (256)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHSTTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 987 01
Q ss_pred chhHHHHHHHHHHHhhcccccCCCCccccccccccccccC--CCceEEeeecchHHHHHHHHHHHHHh
Q 027490 121 ELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSF--YKGIWVYLVGPVTGTFMGAWSYNMIR 186 (222)
Q Consensus 121 ~~~g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~~--~~~~wvy~v~P~~Ga~~a~~~y~~~~ 186 (222)
.+.|+.||+++.+..+..+++||++||||||||||++++. |+++||||+||++|+++|+++|+++.
T Consensus 186 ~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 186 GFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 2346677888888888888999999999999999999865 45899999999999999999999985
No 10
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=3e-40 Score=287.41 Aligned_cols=155 Identities=32% Similarity=0.524 Sum_probs=127.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCc
Q 027490 37 PPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPW 116 (222)
Q Consensus 37 ~~~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~ 116 (222)
+++++|++++||+|||+|+|+++++++.....+...+.+.++++||+++++.+|+++++||||+|||||+++++.|+++|
T Consensus 4 ~~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 83 (281)
T 1ldf_A 4 TSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDK 83 (281)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCH
Confidence 45689999999999999999999887532111122334468999999999999999999999999999999999999998
Q ss_pred cc-----c------------------------------------------------------------------------
Q 027490 117 KQ-----I------------------------------------------------------------------------ 119 (222)
Q Consensus 117 ~~-----~------------------------------------------------------------------------ 119 (222)
.+ .
T Consensus 84 ~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~i 163 (281)
T 1ldf_A 84 RKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLI 163 (281)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHH
Confidence 77 0
Q ss_pred ------------cchhHHHHHHHHHHHhhcccccCCCCcccccccccccccc-------CC------CceEEeeecchHH
Q 027490 120 ------------GELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS-------FY------KGIWVYLVGPVTG 174 (222)
Q Consensus 120 ------------~~~~g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~-------~~------~~~wvy~v~P~~G 174 (222)
..+.|+.||+++.+.++..+++||++||||||||||+++. .| .|+||||+||++|
T Consensus 164 l~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~G 243 (281)
T 1ldf_A 164 LALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVG 243 (281)
T ss_dssp HHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHH
T ss_pred HHHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHHH
Confidence 1244567788888888888899999999999999999861 12 2799999999999
Q ss_pred HHHHHHHHHHHhcCCCC
Q 027490 175 TFMGAWSYNMIRETDKP 191 (222)
Q Consensus 175 a~~a~~~y~~~~~~~~~ 191 (222)
+++|+++|++++.++.|
T Consensus 244 a~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 244 AIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHTGGGC-
T ss_pred HHHHHHHHHHHhCccCC
Confidence 99999999999887666
No 11
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=7.5e-40 Score=278.11 Aligned_cols=150 Identities=39% Similarity=0.586 Sum_probs=130.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccC-cccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCcc
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSAY-DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWK 117 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~~-~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~~ 117 (222)
+++|++++||+|||+|+|++++++..... .+...+++.++++||+++++.+|+++++||||+|||||+++++.|++||.
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAK 82 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHH
Confidence 37899999999999999999998764432 22345688899999999999999999999999999999999999999987
Q ss_pred c-----------------------------------------------------------------------------cc
Q 027490 118 Q-----------------------------------------------------------------------------IG 120 (222)
Q Consensus 118 ~-----------------------------------------------------------------------------~~ 120 (222)
+ ..
T Consensus 83 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~~ 162 (234)
T 2o9g_A 83 EVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPA 162 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHTSTTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 7 01
Q ss_pred chhHHHHHHHHHHHhhcccccCCCCccccccccccccccCCC--ceEEeeecchHHHHHHHHHHHHHhcC
Q 027490 121 ELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYK--GIWVYLVGPVTGTFMGAWSYNMIRET 188 (222)
Q Consensus 121 ~~~g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~~~~--~~wvy~v~P~~Ga~~a~~~y~~~~~~ 188 (222)
.+.|+.||+++.+..+..+++||++||||||||||++++.|. ++||||+||++|+++++++|++++.+
T Consensus 163 ~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 163 GFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred chHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 234567888888888888999999999999999999987654 99999999999999999999999753
No 12
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=4e-40 Score=283.48 Aligned_cols=155 Identities=25% Similarity=0.342 Sum_probs=132.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCc
Q 027490 37 PPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPW 116 (222)
Q Consensus 37 ~~~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~ 116 (222)
.++++|++++||+|||+|+|+++++++.........+++.++++||+++++.+|+++++||||+|||||+++++.|+++|
T Consensus 6 ~~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 85 (258)
T 3c02_A 6 YKSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDL 85 (258)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcH
Confidence 45689999999999999999999987632222224568889999999999999999999999999999999999999999
Q ss_pred cc---------------------------------------------------------------------c-------c
Q 027490 117 KQ---------------------------------------------------------------------I-------G 120 (222)
Q Consensus 117 ~~---------------------------------------------------------------------~-------~ 120 (222)
.+ . .
T Consensus 86 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~ 165 (258)
T 3c02_A 86 KKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFH 165 (258)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCccc
Confidence 87 0 1
Q ss_pred chh-HHHHHHHHHHHhhcccccCCCCcccccccccccccc------CC----CceEEeeecchHHHHHHHHHHHHHhcCC
Q 027490 121 ELA-GIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASS------FY----KGIWVYLVGPVTGTFMGAWSYNMIRETD 189 (222)
Q Consensus 121 ~~~-g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~~~------~~----~~~wvy~v~P~~Ga~~a~~~y~~~~~~~ 189 (222)
.+. |+.||+++.+..+..+++||++||||||||||++++ .| +|+||||+||++|+++++++|++++.++
T Consensus 166 ~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~ 245 (258)
T 3c02_A 166 ILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPL 245 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhccc
Confidence 245 788999999999999999999999999999999973 24 5699999999999999999999998765
Q ss_pred CC
Q 027490 190 KP 191 (222)
Q Consensus 190 ~~ 191 (222)
.|
T Consensus 246 ~~ 247 (258)
T 3c02_A 246 VD 247 (258)
T ss_dssp HH
T ss_pred CC
Confidence 54
No 13
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=4.5e-37 Score=262.82 Aligned_cols=149 Identities=35% Similarity=0.611 Sum_probs=127.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhccc--C----------cc-----cccchhhHHHHHHHHHHHHHHHhcccCccccc
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSA--Y----------DE-----HRVSKLGASVAGGLIVTVMIYAVGHISGAHMN 101 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~--~----------~~-----~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~N 101 (222)
+++|++++||+|||+|+|+++++++... + .+ ...+++.++++||+++++.+|+++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4789999999999999999999876321 0 01 22345679999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCccc---------------------------------------------------------------
Q 027490 102 PAVTLAFAAVRHFPWKQ--------------------------------------------------------------- 118 (222)
Q Consensus 102 PAVTla~~l~g~~~~~~--------------------------------------------------------------- 118 (222)
||||+++++.|++||.+
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999988
Q ss_pred --------ccchhHHHHHHHHHHHhhcccccCCCCcccccccccccc--c----cCCCceEEeeecchHHHHHHHHHHHH
Q 027490 119 --------IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIA--S----SFYKGIWVYLVGPVTGTFMGAWSYNM 184 (222)
Q Consensus 119 --------~~~~~g~~iG~~v~~~~~~~~~~tG~~~NPAr~fgp~~~--~----~~~~~~wvy~v~P~~Ga~~a~~~y~~ 184 (222)
...+.|+.+|+++.+.++..+++||++||||||||||++ . ..|.++|+||++|++|+++|+++|++
T Consensus 163 ~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~ 242 (246)
T 2f2b_A 163 GIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQY 242 (246)
T ss_dssp HHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHH
Confidence 013456788888888889999999999999999999993 2 35777889999999999999999999
Q ss_pred Hhc
Q 027490 185 IRE 187 (222)
Q Consensus 185 ~~~ 187 (222)
++.
T Consensus 243 l~~ 245 (246)
T 2f2b_A 243 LTS 245 (246)
T ss_dssp HTC
T ss_pred HcC
Confidence 864
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.18 E-value=7.7e-11 Score=100.22 Aligned_cols=90 Identities=28% Similarity=0.396 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHH-----h
Q 027490 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAV-----R 112 (222)
Q Consensus 38 ~~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~-----g 112 (222)
.+.++.++.|+++||+|++..++.....+.. ....++.+|+.++..++..+++||+|+|||+|++..+. +
T Consensus 141 ~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~-----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~ 215 (246)
T 2f2b_A 141 ISYWQAMLAEVVGTFLLMITIMGIAVDERAP-----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAG 215 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSTTSC-----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHHHHheeeEEecCCCCC-----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCC
Confidence 4578999999999999999988765322111 12468999999999999999999999999999998882 2
Q ss_pred cCCccc-----ccchhHHHHHHHHH
Q 027490 113 HFPWKQ-----IGELAGIAVGSAVC 132 (222)
Q Consensus 113 ~~~~~~-----~~~~~g~~iG~~v~ 132 (222)
+..|.+ .+|+.|.++|..+.
T Consensus 216 ~~~w~~~~vy~vap~~Ga~laa~~y 240 (246)
T 2f2b_A 216 TDLWNYYSIYVIGPIVGAVLAALTY 240 (246)
T ss_dssp CCCGGGTTHHHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEeeeHHHHHHHHHHHHH
Confidence 445533 57777777776654
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=98.76 E-value=4e-08 Score=84.24 Aligned_cols=89 Identities=24% Similarity=0.270 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCccc
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQ 118 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~~~ 118 (222)
+..+.++.|+++||+|++..++........ .. -..++.+|+.+++..+..++.||+.+|||++++..+... .|..
T Consensus 126 s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~--~~--~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~ 200 (263)
T 2b6o_A 126 SVGQATIVEIFLTLQFVLCIFATYDERRNG--RL--GSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR-NFTN 200 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSCTTSCS--SC--CCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT-CCTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccCCC--Cc--ccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC-Cccc
Confidence 457889999999999999988763211111 11 135788999999999999999999999999999999754 4433
Q ss_pred -----ccchhHHHHHHHHH
Q 027490 119 -----IGELAGIAVGSAVC 132 (222)
Q Consensus 119 -----~~~~~g~~iG~~v~ 132 (222)
.+++.|.++|..+.
T Consensus 201 ~Wvy~vgP~~Ga~la~~~y 219 (263)
T 2b6o_A 201 HWVYWVGPVIGAGLGSLLY 219 (263)
T ss_dssp CTHHHHHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHHHH
Confidence 56666666665554
No 16
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=98.74 E-value=3.8e-08 Score=85.05 Aligned_cols=92 Identities=18% Similarity=0.190 Sum_probs=69.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcC-C--
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHF-P-- 115 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~-~-- 115 (222)
+..+.++.|+++||+|++..++....... . ....++.+|+.+++..+..++.||+.+|||++++..+.... +
T Consensus 167 s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~-~----~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~ 241 (279)
T 2w2e_A 167 SRTRGLFLEAFGTAILCLTVLMLAVEKHR-A----TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNY 241 (279)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSCST-T----GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccCCCC-C----cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhh
Confidence 46788999999999999998876432111 1 12458899999999999999999999999999999998642 2
Q ss_pred -ccc-ccchhHHHHHHHHHHHh
Q 027490 116 -WKQ-IGELAGIAVGSAVCITS 135 (222)
Q Consensus 116 -~~~-~~~~~g~~iG~~v~~~~ 135 (222)
|.. ++++.|.++|..+.-..
T Consensus 242 ~WVy~vgPiiGa~la~~ly~~l 263 (279)
T 2w2e_A 242 HWIYWLGPILGAFLAYSIWQMW 263 (279)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 211 67777777777765443
No 17
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=98.67 E-value=3e-08 Score=84.66 Aligned_cols=89 Identities=22% Similarity=0.251 Sum_probs=66.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHh-cCCc
Q 027490 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVR-HFPW 116 (222)
Q Consensus 38 ~~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g-~~~~ 116 (222)
.+..+.++.|+++||+|++..++.... .... ...++.+|+.+++..+..++.||+.+|||++++..+.- ...|
T Consensus 155 ~s~~~~f~~E~i~Tf~Lv~~il~~~d~--~~~~----~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~ 228 (256)
T 3llq_A 155 YSLVSALLIEIILTAFFLIVILGSTHG--RVPA----GFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWAL 228 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHST--TSCT----TCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcCC--CCCc----cchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcc
Confidence 357889999999999999988765421 1111 13588999999999999999999999999999999863 2222
Q ss_pred cc-----ccchhHHHHHHHHH
Q 027490 117 KQ-----IGELAGIAVGSAVC 132 (222)
Q Consensus 117 ~~-----~~~~~g~~iG~~v~ 132 (222)
.. ++++.|.++|..+.
T Consensus 229 ~~~WVy~vgPi~Ga~la~~~y 249 (256)
T 3llq_A 229 QQLWLFWLAPIVGGAAGAVIW 249 (256)
T ss_dssp HHTTHHHHHHHHHHHHHHHHH
T ss_pred cceeeeeeHHHHHHHHHHHHH
Confidence 11 56677777666554
No 18
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=98.66 E-value=7.8e-08 Score=82.53 Aligned_cols=90 Identities=21% Similarity=0.287 Sum_probs=66.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCccc
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQ 118 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~~~ 118 (222)
+..+.++.|+++||+|++..++.....+.. ... ..++.+|+.+.+..+..++.||+.+|||++++..+... .|..
T Consensus 128 s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~--~~~--~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~ 202 (266)
T 3d9s_A 128 TQGQAMVVELILTFQLALCIFASTDSRRTS--PVG--SPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFSP 202 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCTTCCS--CCC--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-CCCT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccCCC--ccc--hHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-Cccc
Confidence 467899999999999999988764211111 111 35788999999988999999999999999999998654 3332
Q ss_pred ------ccchhHHHHHHHHHH
Q 027490 119 ------IGELAGIAVGSAVCI 133 (222)
Q Consensus 119 ------~~~~~g~~iG~~v~~ 133 (222)
++++.|.++|..+.-
T Consensus 203 ~~Wvy~vgP~~Ga~la~~~y~ 223 (266)
T 3d9s_A 203 AHWVFWVGPIVGAVLAAILYF 223 (266)
T ss_dssp THHHHHHHHHHHHHHHHHHHH
T ss_pred CEeeeehHHHHHHHHHHHHHH
Confidence 456666666665543
No 19
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=98.66 E-value=1.1e-07 Score=84.10 Aligned_cols=91 Identities=24% Similarity=0.335 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCccc
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQ 118 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~~~ 118 (222)
+..+.++.|+++||+|++..++......... .. ..++++|+++.+.....++.||+.+|||++++..+... .|..
T Consensus 172 s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~--~~--~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~-~w~~ 246 (340)
T 3iyz_A 172 TAGHGLLVELIITFQLVFTIFASCDDKRTDV--TG--SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWEN 246 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhcCccCCc--cc--chhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc-CCCc
Confidence 4678999999999999998877643211111 11 24788888888777777899999999999999999743 2332
Q ss_pred -----ccchhHHHHHHHHHHH
Q 027490 119 -----IGELAGIAVGSAVCIT 134 (222)
Q Consensus 119 -----~~~~~g~~iG~~v~~~ 134 (222)
++++.|.++|..++-.
T Consensus 247 ~WVywvgPiiGailaallY~~ 267 (340)
T 3iyz_A 247 HWIYWVGPIIGAVLAGALYEY 267 (340)
T ss_pred EeehhHHHHHHHHHHHHHHHH
Confidence 6777777777766544
No 20
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=98.66 E-value=1.8e-08 Score=88.08 Aligned_cols=95 Identities=24% Similarity=0.324 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHH---hcCC
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAV---RHFP 115 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~---g~~~ 115 (222)
+..+.++.|+++||+|++..+......+...........++.+|+.+++..+..++.||+.+|||++++..+. +. .
T Consensus 183 s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~-~ 261 (304)
T 3cn5_A 183 NKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNK-V 261 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHH-H
T ss_pred cHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCC-C
Confidence 4678999999999999999885432111111000011358899999999999999999999999999999987 21 2
Q ss_pred ccc-----ccchhHHHHHHHHHHH
Q 027490 116 WKQ-----IGELAGIAVGSAVCIT 134 (222)
Q Consensus 116 ~~~-----~~~~~g~~iG~~v~~~ 134 (222)
|.. ++++.|.++|..+.-.
T Consensus 262 w~~~WvywvgPiiGa~laa~~y~~ 285 (304)
T 3cn5_A 262 WDDQWIFWVGPFIGAAVAAAYHQY 285 (304)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHT
T ss_pred cCceEEEeehHHHHHHHHHHHHHH
Confidence 222 5677777776665543
No 21
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=98.65 E-value=8.4e-08 Score=83.64 Aligned_cols=90 Identities=24% Similarity=0.328 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCccc
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQ 118 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~~~ 118 (222)
+..+.++.|+++||+|++..++........ .. -..++++|+.+.+.....++.||+.+|||++++..+... .|..
T Consensus 133 s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~--~~--~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~-~w~~ 207 (301)
T 2zz9_A 133 TAGHGLLVELIITFQLVFTIFASCDDKRTD--VT--GSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWEN 207 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSCSSSSC--CS--SCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-CCTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCCCC--cc--chHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC-CCcc
Confidence 467899999999999999988754211111 11 135788999988888888899999999999999999754 4443
Q ss_pred -----ccchhHHHHHHHHHH
Q 027490 119 -----IGELAGIAVGSAVCI 133 (222)
Q Consensus 119 -----~~~~~g~~iG~~v~~ 133 (222)
++++.|.++|..+.-
T Consensus 208 ~WVy~vgPiiGailaa~ly~ 227 (301)
T 2zz9_A 208 HWIYWVGPIIGAVLAGALYE 227 (301)
T ss_dssp TTHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeeHHHHHHHHHHHHHH
Confidence 566666666665543
No 22
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=98.65 E-value=5.5e-08 Score=81.98 Aligned_cols=90 Identities=19% Similarity=0.274 Sum_probs=68.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhc-CCc
Q 027490 38 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRH-FPW 116 (222)
Q Consensus 38 ~~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~-~~~ 116 (222)
.+.++.++.|+++||+|++..++... .+.. .-..++.+|+.+....+..++.||+.+|||++++..+..+ ..|
T Consensus 132 ~~~~~~~~~E~i~T~~Lv~~i~~~~d--~~~~----~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~ 205 (234)
T 2o9g_A 132 YSMLSALVVELVLSAGFLLVIHGATD--KFAP----AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWAL 205 (234)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTS--TTSC----TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcC--CCCc----cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCC
Confidence 35788999999999999998887542 1111 1146889999999999999999999999999999998743 222
Q ss_pred cc-----ccchhHHHHHHHHHH
Q 027490 117 KQ-----IGELAGIAVGSAVCI 133 (222)
Q Consensus 117 ~~-----~~~~~g~~iG~~v~~ 133 (222)
.. .+++.|.++|..+.-
T Consensus 206 ~~~Wv~~vgP~~Ga~la~~~y~ 227 (234)
T 2o9g_A 206 EQLWFFWVVPIVGGIIGGLIYR 227 (234)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeeehHHhHHHHHHHHHHH
Confidence 22 567777777766543
No 23
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=98.61 E-value=1.5e-07 Score=78.79 Aligned_cols=89 Identities=24% Similarity=0.357 Sum_probs=64.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCccc
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQ 118 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~~~ 118 (222)
+..+.++.|+++||+|++..+......+... .+ ..++.+|+.+.+.....++.||+.+|||++++..+... .|..
T Consensus 124 s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~--~~--~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~-~w~~ 198 (223)
T 3gd8_A 124 TAGHGLLVELIITFQLVFTIFASCDSKRTDV--TG--SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWEN 198 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCTTCSCC--CS--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT-CCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccccCCc--cC--CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc-CCCc
Confidence 4678899999999999998877543211111 11 24788888887777777789999999999999998754 3443
Q ss_pred -----ccchhHHHHHHHHH
Q 027490 119 -----IGELAGIAVGSAVC 132 (222)
Q Consensus 119 -----~~~~~g~~iG~~v~ 132 (222)
.+++.|.+++..+.
T Consensus 199 ~Wvy~vgP~~Ga~la~~~y 217 (223)
T 3gd8_A 199 HWIYWVGPIIGAVLAGGLY 217 (223)
T ss_dssp TTHHHHHHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHHHHHHHH
Confidence 56667766666554
No 24
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=98.53 E-value=2.8e-07 Score=79.65 Aligned_cols=71 Identities=20% Similarity=0.228 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHh
Q 027490 39 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVR 112 (222)
Q Consensus 39 ~l~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g 112 (222)
+.++.++.|+++||+|++..++.....+.. . ..-..++.+|+.++...+..++.||+.+|||++++..+..
T Consensus 144 s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~-~--~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~ 214 (281)
T 1ldf_A 144 NFVQAFAVEMVITAILMGLILALTDDGNGV-P--RGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFA 214 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-C--CGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccCCCC-c--ccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHH
Confidence 578999999999999999988764311111 0 1124688999999999999999999999999999988763
No 25
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=98.52 E-value=2.1e-07 Score=79.98 Aligned_cols=87 Identities=21% Similarity=0.258 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCccc--
Q 027490 41 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQ-- 118 (222)
Q Consensus 41 ~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~~~-- 118 (222)
.+.++.|+++||+|++..++........ .. -..++.+|+.+.+.....++.||+.+|||++++..+... .|..
T Consensus 138 ~~~~~~E~i~T~~Lv~~i~~~~d~~~~~--~~--~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~-~~~~~w 212 (271)
T 1j4n_A 138 GQGLGIEIIGTLQLVLCVLATTDRRRRD--LG--GSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH-NFQDHW 212 (271)
T ss_dssp TGGGHHHHHHHHHHHHHHHHHTCSSCCC--CC--SCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT-CCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCC--cc--ccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC-CCccee
Confidence 5668899999999999887654211111 11 135788999998777777899999999999999998753 3333
Q ss_pred ---ccchhHHHHHHHHH
Q 027490 119 ---IGELAGIAVGSAVC 132 (222)
Q Consensus 119 ---~~~~~g~~iG~~v~ 132 (222)
++++.|.++|..+.
T Consensus 213 v~~vgP~~Ga~la~~~y 229 (271)
T 1j4n_A 213 IFWVGPFIGAALAVLIY 229 (271)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56666666665554
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=98.49 E-value=1.7e-07 Score=80.02 Aligned_cols=90 Identities=19% Similarity=0.185 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCcccccchhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcC-----C
Q 027490 41 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHF-----P 115 (222)
Q Consensus 41 ~r~~laEfigTfllvf~g~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~-----~ 115 (222)
.+.++.|+++||+|++..++.....+. .....+.+++.+|+.++...+..++.||+.+|||++++..+...+ .
T Consensus 135 ~~~~~~E~i~Tf~Lv~~i~~~~d~~~~--~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~ 212 (258)
T 3c02_A 135 TGAFFNELILTGILLLVILVVVDENIC--GKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDT 212 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccC--CcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccc
Confidence 458999999999999998876421111 011122238899999999999999999999999999998886421 1
Q ss_pred c--------cc-ccchhHHHHHHHHH
Q 027490 116 W--------KQ-IGELAGIAVGSAVC 132 (222)
Q Consensus 116 ~--------~~-~~~~~g~~iG~~v~ 132 (222)
| .. .+++.|.++|..+.
T Consensus 213 ~~~~~~y~Wv~~vgP~~Ga~la~~~y 238 (258)
T 3c02_A 213 FTKDNFYFWVPLVAPCVGSVVFCQFY 238 (258)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred cccCCceeehHHHHHHHHHHHHHHHH
Confidence 2 11 56677777766654
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.63 E-value=2.7 Score=36.29 Aligned_cols=20 Identities=25% Similarity=0.225 Sum_probs=16.5
Q ss_pred cccCccccchHHHHHHHHHh
Q 027490 93 GHISGAHMNPAVTLAFAAVR 112 (222)
Q Consensus 93 g~iSGah~NPAVTla~~l~g 112 (222)
+.=||||++||++++-.+..
T Consensus 9 ~GGTgGHi~palala~~L~~ 28 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQA 28 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHh
Confidence 44478999999999988864
No 28
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=41.32 E-value=1.3e+02 Score=25.27 Aligned_cols=42 Identities=14% Similarity=0.184 Sum_probs=25.4
Q ss_pred hhhHHHHHHHHHHHHHHHhcccCccccchHHHHHHHHHhcCCccc
Q 027490 74 KLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQ 118 (222)
Q Consensus 74 ~~~~~l~~G~~v~~~i~~~g~iSGah~NPAVTla~~l~g~~~~~~ 118 (222)
.+..++.+++++.+.++..+..-=+ |=-.++ ..+.++.+|.+
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg--n~l~~~-a~~~~~is~~~ 109 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS--TVLIVV-AKASGRITWGQ 109 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT--THHHHH-HHTTTCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc--chHHHH-HHHcCCCCHHH
Confidence 4456777888888777766554333 422232 34567888776
Done!