Query 027498
Match_columns 222
No_of_seqs 109 out of 1209
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 10:49:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027498.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027498hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0406 Glutathione S-transfer 100.0 1E-39 2.2E-44 247.0 23.9 215 5-219 9-228 (231)
2 PRK09481 sspA stringent starva 100.0 7.7E-39 1.7E-43 247.0 22.0 197 5-207 10-207 (211)
3 PRK15113 glutathione S-transfe 100.0 3.6E-35 7.7E-40 227.0 19.3 194 1-205 1-211 (214)
4 PLN02473 glutathione S-transfe 100.0 6.3E-35 1.4E-39 225.7 18.6 193 5-202 2-211 (214)
5 PRK13972 GSH-dependent disulfi 100.0 2.3E-34 5E-39 222.7 18.2 188 6-204 2-207 (215)
6 PRK10542 glutathionine S-trans 100.0 1.9E-34 4.2E-39 220.9 17.0 188 6-202 1-197 (201)
7 KOG0868 Glutathione S-transfer 100.0 1.6E-34 3.4E-39 206.3 15.1 195 1-203 1-208 (217)
8 PRK10357 putative glutathione 100.0 7.3E-34 1.6E-38 217.9 19.8 191 6-202 1-200 (202)
9 TIGR01262 maiA maleylacetoacet 100.0 1.2E-33 2.7E-38 217.9 19.6 189 7-203 1-205 (210)
10 PLN02395 glutathione S-transfe 100.0 1.2E-33 2.5E-38 218.8 19.5 192 5-202 2-210 (215)
11 TIGR00862 O-ClC intracellular 100.0 1.1E-32 2.3E-37 213.7 22.9 192 11-213 16-231 (236)
12 COG0625 Gst Glutathione S-tran 100.0 3.2E-33 6.9E-38 215.7 19.3 184 6-197 1-199 (211)
13 PRK11752 putative S-transferas 100.0 1.7E-32 3.8E-37 217.8 19.5 195 5-203 44-259 (264)
14 PLN02378 glutathione S-transfe 100.0 1.3E-31 2.9E-36 206.8 19.3 187 11-210 17-207 (213)
15 PTZ00057 glutathione s-transfe 100.0 1.2E-31 2.5E-36 206.0 17.4 190 1-204 1-201 (205)
16 PLN02817 glutathione dehydroge 100.0 1.5E-30 3.3E-35 205.8 21.4 187 13-212 72-261 (265)
17 KOG0867 Glutathione S-transfer 100.0 5.8E-30 1.2E-34 198.7 18.6 196 5-205 2-212 (226)
18 PRK10387 glutaredoxin 2; Provi 100.0 5.4E-30 1.2E-34 197.5 15.1 177 6-196 1-207 (210)
19 KOG1695 Glutathione S-transfer 100.0 7.5E-29 1.6E-33 186.8 15.9 192 4-204 2-202 (206)
20 TIGR02182 GRXB Glutaredoxin, G 100.0 6.1E-28 1.3E-32 185.8 15.8 175 7-196 1-206 (209)
21 KOG4420 Uncharacterized conser 99.9 1.3E-25 2.7E-30 169.7 13.8 207 5-214 26-299 (325)
22 KOG1422 Intracellular Cl- chan 99.9 3.4E-22 7.3E-27 147.1 16.3 193 13-215 20-218 (221)
23 PLN02907 glutamate-tRNA ligase 99.9 1.9E-22 4E-27 177.8 17.2 155 6-195 3-159 (722)
24 KOG3029 Glutathione S-transfer 99.8 2.3E-19 4.9E-24 137.5 14.6 180 5-192 90-354 (370)
25 PF13417 GST_N_3: Glutathione 99.8 3.2E-20 6.9E-25 119.6 8.1 74 8-82 1-74 (75)
26 cd03059 GST_N_SspA GST_N famil 99.8 4.6E-19 1E-23 113.6 8.6 73 6-79 1-73 (73)
27 cd03058 GST_N_Tau GST_N family 99.8 6.1E-19 1.3E-23 113.4 8.6 74 6-79 1-74 (74)
28 cd03061 GST_N_CLIC GST_N famil 99.8 7.3E-19 1.6E-23 115.8 8.3 70 12-82 20-89 (91)
29 cd03052 GST_N_GDAP1 GST_N fami 99.8 8E-19 1.7E-23 112.3 7.6 70 6-76 1-73 (73)
30 cd03076 GST_N_Pi GST_N family, 99.8 8.3E-19 1.8E-23 112.4 6.7 72 5-77 1-72 (73)
31 cd03041 GST_N_2GST_N GST_N fam 99.8 2.5E-18 5.4E-23 111.3 7.9 73 6-79 2-77 (77)
32 cd03045 GST_N_Delta_Epsilon GS 99.8 2.7E-18 5.9E-23 110.3 7.9 71 6-77 1-74 (74)
33 cd03060 GST_N_Omega_like GST_N 99.8 3.1E-18 6.7E-23 109.1 8.0 69 6-75 1-70 (71)
34 cd03185 GST_C_Tau GST_C family 99.8 2.4E-17 5.3E-22 116.8 12.7 122 90-211 2-124 (126)
35 cd03053 GST_N_Phi GST_N family 99.8 6.8E-18 1.5E-22 109.0 8.4 72 6-78 2-76 (76)
36 cd03050 GST_N_Theta GST_N fami 99.7 9E-18 2E-22 108.4 8.4 73 6-79 1-76 (76)
37 cd03056 GST_N_4 GST_N family, 99.7 1.1E-17 2.4E-22 107.1 7.7 70 6-76 1-73 (73)
38 cd03039 GST_N_Sigma_like GST_N 99.7 6.3E-18 1.4E-22 108.0 6.2 71 6-77 1-72 (72)
39 cd03037 GST_N_GRX2 GST_N famil 99.7 1.4E-17 3.1E-22 106.1 7.6 70 6-77 1-71 (71)
40 cd03049 GST_N_3 GST_N family, 99.7 1.6E-17 3.4E-22 106.4 7.3 70 6-76 1-73 (73)
41 cd03055 GST_N_Omega GST_N fami 99.7 2.8E-17 6.1E-22 109.3 8.4 71 5-76 18-89 (89)
42 cd03044 GST_N_EF1Bgamma GST_N 99.7 2.5E-17 5.4E-22 106.1 7.7 70 7-77 2-74 (75)
43 cd03048 GST_N_Ure2p_like GST_N 99.7 3.4E-17 7.4E-22 107.0 8.4 73 6-80 2-80 (81)
44 cd03047 GST_N_2 GST_N family, 99.7 2.7E-17 6E-22 105.3 7.6 70 6-76 1-73 (73)
45 cd03051 GST_N_GTT2_like GST_N 99.7 2.6E-17 5.7E-22 105.6 7.1 70 6-76 1-74 (74)
46 cd03046 GST_N_GTT1_like GST_N 99.7 5.6E-17 1.2E-21 104.7 8.2 73 6-80 1-76 (76)
47 cd03042 GST_N_Zeta GST_N famil 99.7 5.7E-17 1.2E-21 103.8 7.5 70 6-76 1-73 (73)
48 cd03057 GST_N_Beta GST_N famil 99.7 7.9E-17 1.7E-21 104.3 8.0 73 6-80 1-77 (77)
49 KOG4244 Failed axon connection 99.7 2E-16 4.3E-21 120.8 11.3 176 6-192 46-272 (281)
50 cd03077 GST_N_Alpha GST_N fami 99.7 1.1E-16 2.3E-21 104.0 8.3 72 5-80 1-77 (79)
51 cd03040 GST_N_mPGES2 GST_N fam 99.7 9.8E-17 2.1E-21 103.8 7.5 72 5-79 1-76 (77)
52 cd03184 GST_C_Omega GST_C fami 99.7 4.3E-16 9.3E-21 110.2 11.1 119 91-212 2-123 (124)
53 cd03190 GST_C_ECM4_like GST_C 99.7 5E-16 1.1E-20 112.3 11.5 126 90-215 3-131 (142)
54 cd03075 GST_N_Mu GST_N family, 99.7 1.3E-16 2.8E-21 104.4 7.4 73 6-79 1-82 (82)
55 cd03186 GST_C_SspA GST_N famil 99.7 5.4E-16 1.2E-20 106.8 10.8 104 90-199 2-106 (107)
56 cd03080 GST_N_Metaxin_like GST 99.7 4.2E-16 9.2E-21 100.3 8.1 67 6-80 2-75 (75)
57 PF02798 GST_N: Glutathione S- 99.7 4.4E-16 9.6E-21 100.4 8.1 72 6-77 1-76 (76)
58 COG2999 GrxB Glutaredoxin 2 [P 99.7 1.9E-15 4.1E-20 108.7 11.5 177 6-197 1-208 (215)
59 PF13409 GST_N_2: Glutathione 99.7 3.4E-16 7.4E-21 99.3 6.9 65 13-78 1-70 (70)
60 cd03196 GST_C_5 GST_C family, 99.7 2.2E-15 4.8E-20 105.0 11.1 109 87-199 2-114 (115)
61 cd03038 GST_N_etherase_LigE GS 99.6 5.6E-16 1.2E-20 102.0 7.4 67 12-80 14-84 (84)
62 cd03188 GST_C_Beta GST_C famil 99.6 3.2E-15 6.9E-20 103.9 9.9 103 91-200 2-114 (114)
63 cd00570 GST_N_family Glutathio 99.6 3E-15 6.6E-20 94.5 7.6 70 6-76 1-71 (71)
64 cd03043 GST_N_1 GST_N family, 99.6 3E-15 6.5E-20 95.7 7.2 66 10-76 6-73 (73)
65 cd03198 GST_C_CLIC GST_C famil 99.6 3E-14 6.5E-19 100.9 11.1 106 104-211 9-133 (134)
66 cd03209 GST_C_Mu GST_C family, 99.6 2.1E-14 4.6E-19 101.0 10.1 109 91-205 2-112 (121)
67 cd03203 GST_C_Lambda GST_C fam 99.6 3.4E-14 7.5E-19 99.8 10.6 113 88-210 1-119 (120)
68 cd03191 GST_C_Zeta GST_C famil 99.6 1.8E-14 3.9E-19 101.3 9.1 106 90-202 2-119 (121)
69 cd03054 GST_N_Metaxin GST_N fa 99.6 1.3E-14 2.8E-19 92.6 7.6 65 6-78 1-72 (72)
70 cd03201 GST_C_DHAR GST_C famil 99.6 5.6E-14 1.2E-18 98.7 10.9 102 107-211 15-119 (121)
71 cd03178 GST_C_Ure2p_like GST_C 99.6 2.4E-14 5.2E-19 99.4 8.7 104 91-200 1-112 (113)
72 cd03210 GST_C_Pi GST_C family, 99.6 3.3E-14 7.2E-19 100.7 9.2 108 91-204 3-114 (126)
73 cd03182 GST_C_GTT2_like GST_C 99.5 7.6E-14 1.7E-18 97.4 10.8 103 88-196 1-117 (117)
74 COG0435 ECM4 Predicted glutath 99.5 1.1E-13 2.4E-18 106.3 11.6 201 5-208 51-291 (324)
75 cd03208 GST_C_Alpha GST_C fami 99.5 6.9E-14 1.5E-18 100.4 9.8 108 91-204 3-117 (137)
76 cd03189 GST_C_GTT1_like GST_C 99.5 9.3E-14 2E-18 97.3 10.3 102 86-194 2-119 (119)
77 cd03187 GST_C_Phi GST_C family 99.5 9.2E-14 2E-18 97.1 10.0 105 91-200 2-118 (118)
78 KOG3027 Mitochondrial outer me 99.5 3.8E-13 8.3E-18 99.1 12.8 169 13-192 33-247 (257)
79 cd03180 GST_C_2 GST_C family, 99.5 2.4E-13 5.3E-18 93.7 10.0 99 91-196 2-110 (110)
80 cd03181 GST_C_EFB1gamma GST_C 99.5 8E-14 1.7E-18 98.2 7.5 111 91-205 1-119 (123)
81 cd03177 GST_C_Delta_Epsilon GS 99.5 1.8E-13 4E-18 95.8 8.7 104 91-200 2-110 (118)
82 KOG2903 Predicted glutathione 99.5 4.3E-13 9.4E-18 102.2 10.4 200 4-208 36-293 (319)
83 cd03183 GST_C_Theta GST_C fami 99.5 4.4E-13 9.5E-18 94.9 8.7 103 92-200 2-120 (126)
84 cd03200 GST_C_JTV1 GST_C famil 99.4 5.7E-13 1.2E-17 89.7 7.7 94 72-192 1-95 (96)
85 PF00043 GST_C: Glutathione S- 99.4 9.6E-13 2.1E-17 88.4 8.3 70 120-194 25-95 (95)
86 cd03207 GST_C_8 GST_C family, 99.4 6.1E-13 1.3E-17 90.8 7.4 74 120-201 27-101 (103)
87 cd03195 GST_C_4 GST_C family, 99.4 1.3E-12 2.9E-17 90.8 9.2 102 90-201 2-112 (114)
88 cd03206 GST_C_7 GST_C family, 99.4 2.3E-12 5E-17 87.5 7.7 70 120-196 30-100 (100)
89 PF13410 GST_C_2: Glutathione 99.4 2.6E-12 5.7E-17 81.1 6.6 67 119-189 2-69 (69)
90 cd03179 GST_C_1 GST_C family, 99.3 6.9E-12 1.5E-16 85.7 8.1 94 91-191 2-105 (105)
91 cd03204 GST_C_GDAP1 GST_C fami 99.3 9E-12 1.9E-16 85.6 8.2 74 119-196 25-111 (111)
92 cd03079 GST_N_Metaxin2 GST_N f 99.3 1.6E-11 3.5E-16 77.8 6.9 60 12-78 15-74 (74)
93 PF14497 GST_C_3: Glutathione 99.3 1.1E-11 2.4E-16 83.9 6.2 94 89-192 3-99 (99)
94 cd03192 GST_C_Sigma_like GST_C 99.3 3E-11 6.5E-16 82.5 8.4 95 91-190 2-104 (104)
95 TIGR02190 GlrX-dom Glutaredoxi 99.3 2.8E-11 6.2E-16 78.4 7.6 72 4-76 8-79 (79)
96 cd03194 GST_C_3 GST_C family, 99.3 4E-11 8.6E-16 83.4 8.7 72 120-201 38-113 (114)
97 cd00299 GST_C_family Glutathio 99.2 1.2E-10 2.5E-15 78.5 7.9 91 96-190 2-100 (100)
98 PRK10638 glutaredoxin 3; Provi 99.1 3.7E-10 8E-15 73.9 7.5 71 5-76 3-74 (83)
99 cd03202 GST_C_etherase_LigE GS 99.1 3.5E-10 7.6E-15 79.8 7.7 67 121-192 56-123 (124)
100 cd03029 GRX_hybridPRX5 Glutare 99.1 5.5E-10 1.2E-14 71.0 7.7 71 5-76 2-72 (72)
101 cd03193 GST_C_Metaxin GST_C fa 99.1 1.8E-10 3.8E-15 76.3 5.5 67 123-191 19-88 (88)
102 cd03078 GST_N_Metaxin1_like GS 99.0 2.7E-09 5.9E-14 67.9 7.6 58 13-78 15-72 (73)
103 KOG3028 Translocase of outer m 98.9 1.4E-07 3E-12 74.5 15.2 170 14-192 17-233 (313)
104 cd03205 GST_C_6 GST_C family, 98.9 1.1E-08 2.4E-13 69.0 7.8 66 118-190 32-98 (98)
105 cd03027 GRX_DEP Glutaredoxin ( 98.9 8.6E-09 1.9E-13 65.6 6.7 68 5-73 2-70 (73)
106 PF14834 GST_C_4: Glutathione 98.8 4.5E-08 9.7E-13 66.2 8.8 104 88-201 1-113 (117)
107 PRK10329 glutaredoxin-like pro 98.8 1.6E-08 3.4E-13 65.7 6.2 61 5-66 2-62 (81)
108 cd03211 GST_C_Metaxin2 GST_C f 98.8 2.7E-08 5.9E-13 70.3 7.3 70 119-191 53-126 (126)
109 cd02066 GRX_family Glutaredoxi 98.8 3.6E-08 7.9E-13 62.0 7.0 69 5-74 1-70 (72)
110 cd03197 GST_C_mPGES2 GST_C fam 98.8 3.3E-08 7.2E-13 70.9 7.0 64 124-192 80-145 (149)
111 cd02976 NrdH NrdH-redoxin (Nrd 98.8 2.7E-08 5.8E-13 62.9 6.0 62 5-67 1-63 (73)
112 TIGR02196 GlrX_YruB Glutaredox 98.8 4.1E-08 8.8E-13 62.2 6.7 70 5-75 1-73 (74)
113 cd03212 GST_C_Metaxin1_3 GST_C 98.7 3.9E-08 8.3E-13 70.5 7.1 72 120-192 61-134 (137)
114 cd03418 GRX_GRXb_1_3_like Glut 98.7 6.7E-08 1.5E-12 61.7 6.9 71 5-75 1-72 (75)
115 TIGR02200 GlrX_actino Glutared 98.6 2.4E-07 5.1E-12 59.3 7.1 70 5-75 1-75 (77)
116 COG0695 GrxC Glutaredoxin and 98.6 2.9E-07 6.3E-12 59.5 7.1 69 5-74 2-73 (80)
117 TIGR02181 GRX_bact Glutaredoxi 98.5 3.7E-07 8E-12 59.0 6.7 71 6-77 1-72 (79)
118 TIGR02194 GlrX_NrdH Glutaredox 98.5 3E-07 6.5E-12 58.3 5.7 57 6-63 1-57 (72)
119 PHA03050 glutaredoxin; Provisi 98.5 1.1E-06 2.3E-11 60.2 8.3 70 3-73 12-88 (108)
120 PRK11200 grxA glutaredoxin 1; 98.5 8.7E-07 1.9E-11 58.1 7.5 76 5-80 2-84 (85)
121 TIGR02189 GlrX-like_plant Glut 98.5 1.4E-06 3.1E-11 58.8 8.6 72 2-74 6-81 (99)
122 PF00462 Glutaredoxin: Glutare 98.4 2.8E-07 6.1E-12 56.2 3.9 59 6-65 1-60 (60)
123 cd03419 GRX_GRXh_1_2_like Glut 98.4 2.9E-06 6.3E-11 55.0 7.9 72 5-77 1-76 (82)
124 TIGR02183 GRXA Glutaredoxin, G 98.4 2.8E-06 6E-11 55.8 7.6 75 6-80 2-83 (86)
125 TIGR00365 monothiol glutaredox 98.3 3.9E-06 8.5E-11 56.4 7.3 72 3-75 11-88 (97)
126 cd03028 GRX_PICOT_like Glutare 98.2 8.8E-06 1.9E-10 53.9 7.4 72 3-75 7-84 (90)
127 TIGR02180 GRX_euk Glutaredoxin 98.0 4.1E-05 8.8E-10 49.7 7.9 71 6-77 1-77 (84)
128 PF10568 Tom37: Outer mitochon 97.9 6.5E-05 1.4E-09 47.4 6.4 55 13-75 13-71 (72)
129 cd03031 GRX_GRX_like Glutaredo 97.6 0.00029 6.4E-09 50.9 7.4 70 5-74 1-80 (147)
130 PRK10824 glutaredoxin-4; Provi 97.6 0.00037 7.9E-09 48.1 7.1 71 4-75 15-91 (115)
131 PRK12759 bifunctional gluaredo 97.6 0.00028 6E-09 59.8 7.7 68 5-73 3-79 (410)
132 KOG1147 Glutamyl-tRNA syntheta 97.5 5.3E-05 1.2E-09 64.3 2.2 116 61-198 44-160 (712)
133 KOG1752 Glutaredoxin and relat 97.3 0.0014 2.9E-08 44.4 7.1 72 3-75 13-88 (104)
134 PTZ00062 glutaredoxin; Provisi 97.2 0.0016 3.5E-08 49.7 7.0 70 4-74 113-188 (204)
135 PF04399 Glutaredoxin2_C: Glut 97.2 0.0021 4.5E-08 45.5 6.7 65 123-197 59-125 (132)
136 cd02973 TRX_GRX_like Thioredox 97.1 0.002 4.2E-08 39.8 5.9 58 5-66 2-64 (67)
137 cd03036 ArsC_like Arsenate Red 97.0 0.0011 2.4E-08 45.6 3.8 33 6-38 1-33 (111)
138 cd02977 ArsC_family Arsenate R 96.9 0.0014 3E-08 44.6 3.9 33 6-38 1-33 (105)
139 COG4545 Glutaredoxin-related p 96.8 0.0054 1.2E-07 38.2 5.4 63 1-66 1-77 (85)
140 PRK01655 spxA transcriptional 96.7 0.0027 5.8E-08 45.1 4.3 32 6-37 2-33 (131)
141 cd03032 ArsC_Spx Arsenate Redu 96.6 0.004 8.6E-08 43.1 4.3 32 6-37 2-33 (115)
142 TIGR01617 arsC_related transcr 96.5 0.004 8.6E-08 43.3 4.0 32 6-37 1-32 (117)
143 cd03199 GST_C_GRX2 GST_C famil 96.4 0.013 2.9E-07 41.1 6.0 64 123-196 60-125 (128)
144 cd03033 ArsC_15kD Arsenate Red 96.3 0.007 1.5E-07 41.7 4.2 33 5-37 1-33 (113)
145 cd03035 ArsC_Yffb Arsenate Red 96.3 0.0066 1.4E-07 41.3 3.9 32 6-37 1-32 (105)
146 PRK13344 spxA transcriptional 96.1 0.016 3.6E-07 41.1 5.3 32 6-37 2-33 (132)
147 PRK12559 transcriptional regul 96.1 0.016 3.4E-07 41.1 5.1 32 6-37 2-33 (131)
148 PRK10026 arsenate reductase; P 96.1 0.011 2.3E-07 42.4 4.2 33 5-37 3-35 (141)
149 PF05768 DUF836: Glutaredoxin- 96.0 0.028 6.1E-07 36.2 5.7 55 5-62 1-57 (81)
150 cd03030 GRX_SH3BGR Glutaredoxi 96.0 0.054 1.2E-06 35.8 7.0 67 6-73 2-79 (92)
151 COG0278 Glutaredoxin-related p 95.3 0.11 2.3E-06 34.6 6.3 72 4-76 15-93 (105)
152 TIGR01616 nitro_assoc nitrogen 95.3 0.033 7.1E-07 39.2 4.2 33 5-37 2-34 (126)
153 TIGR00412 redox_disulf_2 small 95.2 0.11 2.3E-06 33.0 6.1 55 5-65 2-60 (76)
154 cd03034 ArsC_ArsC Arsenate Red 95.1 0.036 7.9E-07 38.1 3.9 32 6-37 1-32 (112)
155 COG1393 ArsC Arsenate reductas 95.0 0.043 9.2E-07 38.1 4.1 33 5-37 2-34 (117)
156 PF11287 DUF3088: Protein of u 95.0 0.1 2.3E-06 35.4 5.7 68 13-80 23-108 (112)
157 cd03026 AhpF_NTD_C TRX-GRX-lik 95.0 0.12 2.5E-06 34.0 5.9 57 5-65 15-76 (89)
158 TIGR00014 arsC arsenate reduct 95.0 0.04 8.7E-07 38.0 3.9 32 6-37 1-32 (114)
159 TIGR00411 redox_disulf_1 small 94.9 0.27 5.9E-06 31.1 7.6 57 5-63 2-62 (82)
160 PRK10853 putative reductase; P 94.9 0.043 9.3E-07 38.1 3.9 32 6-37 2-33 (118)
161 cd01659 TRX_superfamily Thiore 94.7 0.086 1.9E-06 30.8 4.7 54 6-60 1-59 (69)
162 PF11801 Tom37_C: Tom37 C-term 93.6 0.31 6.7E-06 36.1 6.3 37 127-163 113-153 (168)
163 PHA02125 thioredoxin-like prot 93.3 0.32 6.9E-06 30.6 5.3 51 6-60 2-52 (75)
164 PF13192 Thioredoxin_3: Thiore 91.8 1.1 2.4E-05 28.2 6.4 56 5-66 2-61 (76)
165 PF03960 ArsC: ArsC family; I 88.7 0.61 1.3E-05 31.8 3.4 29 9-37 1-29 (110)
166 PF04908 SH3BGR: SH3-binding, 86.7 3.7 8E-05 27.5 6.1 69 5-73 2-85 (99)
167 KOG1668 Elongation factor 1 be 76.8 1.7 3.6E-05 33.7 1.7 59 128-197 10-68 (231)
168 TIGR01295 PedC_BrcD bacterioci 75.6 15 0.00032 25.5 6.2 32 6-37 27-62 (122)
169 KOG0911 Glutaredoxin-related p 75.5 11 0.00023 29.3 5.7 70 5-75 140-215 (227)
170 COG3019 Predicted metal-bindin 73.7 13 0.00029 26.5 5.4 72 5-79 27-104 (149)
171 cd02989 Phd_like_TxnDC9 Phosdu 72.6 21 0.00046 24.2 6.3 57 6-66 26-89 (113)
172 cd02949 TRX_NTR TRX domain, no 72.3 22 0.00049 23.1 6.3 57 6-64 17-79 (97)
173 PF09635 MetRS-N: MetRS-N bind 70.8 3.6 7.8E-05 28.6 2.0 27 54-80 35-63 (122)
174 cd02947 TRX_family TRX family; 68.6 25 0.00055 21.7 6.5 54 6-63 14-74 (93)
175 PF11417 Inhibitor_G39P: Loade 68.0 27 0.00058 21.8 5.9 64 66-155 4-69 (71)
176 TIGR03143 AhpF_homolog putativ 66.9 15 0.00033 32.7 5.7 56 5-64 479-539 (555)
177 cd02975 PfPDO_like_N Pyrococcu 66.5 18 0.00038 24.6 4.9 51 6-60 25-81 (113)
178 TIGR02187 GlrX_arch Glutaredox 65.9 34 0.00073 26.2 6.9 54 5-60 136-192 (215)
179 TIGR03140 AhpF alkyl hydropero 64.7 5.1 0.00011 35.2 2.4 72 5-78 120-198 (515)
180 PRK15317 alkyl hydroperoxide r 64.3 6.3 0.00014 34.7 2.8 72 5-78 119-197 (517)
181 KOG2824 Glutaredoxin-related p 62.9 24 0.00052 28.3 5.4 69 5-73 132-210 (281)
182 PF00085 Thioredoxin: Thioredo 58.6 46 0.001 21.3 7.8 70 6-77 21-102 (103)
183 cd02953 DsbDgamma DsbD gamma f 58.0 37 0.0008 22.3 5.2 52 6-59 15-77 (104)
184 cd02984 TRX_PICOT TRX domain, 57.4 48 0.001 21.2 6.5 57 6-64 18-80 (97)
185 PF00731 AIRC: AIR carboxylase 52.8 30 0.00065 25.1 4.2 33 14-46 13-45 (150)
186 PF01323 DSBA: DSBA-like thior 50.4 29 0.00062 25.7 4.1 36 5-40 1-41 (193)
187 TIGR02187 GlrX_arch Glutaredox 48.3 77 0.0017 24.2 6.2 53 5-59 22-82 (215)
188 COG3011 Predicted thiol-disulf 47.9 1E+02 0.0022 22.1 7.2 78 1-79 5-87 (137)
189 cd03021 DsbA_GSTK DsbA family, 47.2 31 0.00068 26.2 3.9 35 4-38 1-39 (209)
190 PTZ00051 thioredoxin; Provisio 47.1 75 0.0016 20.3 6.3 57 6-64 22-83 (98)
191 TIGR02681 phage_pRha phage reg 45.6 20 0.00044 24.4 2.3 26 55-80 2-28 (108)
192 PF09413 DUF2007: Domain of un 44.7 27 0.00059 21.0 2.6 31 7-37 2-32 (67)
193 KOG3425 Uncharacterized conser 44.5 86 0.0019 21.9 5.1 68 11-78 42-122 (128)
194 cd02963 TRX_DnaJ TRX domain, D 43.6 98 0.0021 20.7 5.9 56 6-63 28-90 (111)
195 cd03020 DsbA_DsbC_DsbG DsbA fa 39.3 43 0.00093 25.2 3.5 22 5-26 80-101 (197)
196 PRK09266 hypothetical protein; 38.5 53 0.0011 26.1 4.1 58 23-80 200-259 (266)
197 PF04134 DUF393: Protein of un 38.0 1.1E+02 0.0024 20.4 5.1 69 8-78 1-77 (114)
198 cd02951 SoxW SoxW family; SoxW 37.6 1E+02 0.0023 20.9 5.0 16 6-21 18-33 (125)
199 PF13098 Thioredoxin_2: Thiore 36.5 41 0.0009 22.2 2.8 20 6-25 9-28 (112)
200 cd02957 Phd_like Phosducin (Ph 35.3 1.1E+02 0.0023 20.5 4.7 54 7-65 29-89 (113)
201 PF06110 DUF953: Eukaryotic pr 34.6 38 0.00083 23.5 2.3 59 10-70 34-107 (119)
202 cd02972 DsbA_family DsbA famil 34.0 59 0.0013 20.3 3.1 22 6-27 1-22 (98)
203 PF13728 TraF: F plasmid trans 33.5 1.9E+02 0.0041 22.3 6.3 52 6-59 124-188 (215)
204 PRK09381 trxA thioredoxin; Pro 32.4 1.5E+02 0.0032 19.4 8.0 57 6-64 25-87 (109)
205 PRK11657 dsbG disulfide isomer 32.4 68 0.0015 25.4 3.7 20 6-25 121-140 (251)
206 cd02956 ybbN ybbN protein fami 32.3 1.2E+02 0.0027 19.2 4.5 56 7-64 17-78 (96)
207 COG3526 Uncharacterized protei 31.9 76 0.0016 20.5 3.1 27 1-27 1-29 (99)
208 PHA03075 glutaredoxin-like pro 31.9 78 0.0017 21.9 3.3 66 5-79 4-70 (123)
209 cd04911 ACT_AKiii-YclM-BS_1 AC 31.7 65 0.0014 20.4 2.8 24 14-37 15-38 (76)
210 TIGR01162 purE phosphoribosyla 31.7 77 0.0017 23.2 3.6 35 13-47 10-44 (156)
211 cd02959 ERp19 Endoplasmic reti 31.4 1.7E+02 0.0037 19.9 5.9 59 7-66 24-91 (117)
212 PRK10877 protein disulfide iso 31.0 80 0.0017 24.7 3.9 22 5-26 110-131 (232)
213 PF09868 DUF2095: Uncharacteri 30.7 43 0.00094 23.1 2.0 63 18-80 26-92 (128)
214 PHA02278 thioredoxin-like prot 29.9 1.7E+02 0.0037 19.4 6.5 57 8-65 20-85 (103)
215 cd03025 DsbA_FrnE_like DsbA fa 29.7 97 0.0021 22.8 4.1 33 5-37 2-40 (193)
216 cd03022 DsbA_HCCA_Iso DsbA fam 29.3 84 0.0018 23.1 3.7 32 6-37 1-36 (192)
217 PF12290 DUF3802: Protein of u 29.1 60 0.0013 22.2 2.4 85 68-158 8-97 (113)
218 PRK10996 thioredoxin 2; Provis 27.7 2.2E+02 0.0047 20.0 6.6 57 6-64 56-118 (139)
219 COG5515 Uncharacterized conser 27.0 54 0.0012 19.7 1.7 22 5-26 2-27 (70)
220 PRK14530 adenylate kinase; Pro 25.4 1E+02 0.0022 23.4 3.6 32 1-32 1-32 (215)
221 PF15608 PELOTA_1: PELOTA RNA 24.8 1.5E+02 0.0032 19.9 3.7 30 7-36 59-88 (100)
222 PF04564 U-box: U-box domain; 24.2 1.8E+02 0.004 17.9 4.0 46 54-100 15-69 (73)
223 cd03024 DsbA_FrnE DsbA family, 24.0 89 0.0019 23.2 3.0 32 6-37 1-40 (201)
224 COG2761 FrnE Predicted dithiol 23.7 41 0.00089 26.2 1.1 18 5-22 7-24 (225)
225 TIGR01068 thioredoxin thioredo 22.4 2.1E+02 0.0046 17.9 6.2 51 7-59 19-73 (101)
226 cd03003 PDI_a_ERdj5_N PDIa fam 21.7 2.3E+02 0.005 18.2 5.4 52 6-59 22-77 (101)
227 cd02962 TMX2 TMX2 family; comp 21.6 3.2E+02 0.0069 19.7 5.9 59 6-65 51-121 (152)
228 cd02954 DIM1 Dim1 family; Dim1 21.4 2.6E+02 0.0056 19.2 4.6 55 9-65 21-81 (114)
229 cd02993 PDI_a_APS_reductase PD 21.2 2.6E+02 0.0055 18.4 5.6 53 6-59 25-83 (109)
230 PF10022 DUF2264: Uncharacteri 21.1 2.5E+02 0.0054 23.7 5.2 105 55-163 98-213 (361)
231 PF11823 DUF3343: Protein of u 20.8 1.7E+02 0.0036 18.0 3.3 30 8-37 5-34 (73)
232 PRK15371 effector protein YopJ 20.7 3.9E+02 0.0084 21.8 6.0 41 123-164 23-64 (287)
233 PF03711 OKR_DC_1_C: Orn/Lys/A 20.6 51 0.0011 23.5 1.0 47 30-78 64-112 (136)
234 cd02985 TRX_CDSP32 TRX family, 20.5 2.6E+02 0.0056 18.2 6.1 54 8-64 21-83 (103)
235 cd03019 DsbA_DsbA DsbA family, 20.3 1.6E+02 0.0034 21.3 3.6 21 5-25 18-38 (178)
236 cd03006 PDI_a_EFP1_N PDIa fami 20.1 2.1E+02 0.0046 19.4 3.9 51 6-59 33-89 (113)
237 PF03421 YopJ: YopJ Serine/Thr 20.1 1.5E+02 0.0033 22.1 3.4 37 127-164 4-40 (177)
No 1
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-39 Score=247.01 Aligned_cols=215 Identities=52% Similarity=0.808 Sum_probs=192.3
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCC-CCC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWK-QNP 83 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~-~~~ 83 (222)
.++||++..|||++|++++|..+||+|+.++.|..+++++++..||.+++||+|+++|..|.||..|++||++.++ +++
T Consensus 9 ~vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~ 88 (231)
T KOG0406|consen 9 TVKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLTNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPP 88 (231)
T ss_pred eEEEEEeecChHHHHHHHHHHhcCCceEEEecCCCCCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCC
Confidence 5999999999999999999999999999999999999999999997779999999999999999999999999999 589
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccchhhhhhhc-CCcHHHHHHHH-HHHHHHHHHHHhc-CCCcccCCCCChhHHHHHhHH
Q 027498 84 LLPDDPYERANARFWAKFFDEKCVPEVMGAFA-SKGEEQEKAAK-ARENLKMLERALE-GKPFFGGDKIGFLDIAVGWIG 160 (222)
Q Consensus 84 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~le~~L~-~~~~l~G~~~t~aD~~l~~~l 160 (222)
++|+|+.+|+.++.|..+++..+.......+. ..++..+...+ +.+.|..||+.|. +.+|+.|+++++.|+++++.+
T Consensus 89 iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~ 168 (231)
T KOG0406|consen 89 ILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSF 168 (231)
T ss_pred CCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhH
Confidence 99999999999999999999988777777666 44577777788 9999999999998 789999999999999999776
Q ss_pred HHHHHHHHH-hcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHHHHhhhhhhhhcc
Q 027498 161 IWGRIVEEI-AGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNKGFHKILTG 219 (222)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (222)
.+.....+. .+......+.+|.|.+|.++|.++|.+++++++.+++.+..+.+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~~~~~~~~~~ 228 (231)
T KOG0406|consen 169 ERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEKVVEFMKKYRQGSPN 228 (231)
T ss_pred HHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHHHHHHHHHHHHHhccc
Confidence 666443333 22345557799999999999999999999999999999999999987543
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=7.7e-39 Score=246.95 Aligned_cols=197 Identities=22% Similarity=0.323 Sum_probs=167.7
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCCCCC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPL 84 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~~~l 84 (222)
.|+||+++.||+|++|+++|+++|++|+.+.++..++.++++++||. |+||+|+++|.+|+||.||++||++.+|+..+
T Consensus 10 ~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~nP~-g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~l 88 (211)
T PRK09481 10 VMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKDNLPQDLIDLNPY-QSVPTLVDRELTLYESRIIMEYLDERFPHPPL 88 (211)
T ss_pred eeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcccCCHHHHHhCCC-CCCCEEEECCEEeeCHHHHHHHHHHhCCCCCC
Confidence 48999999999999999999999999999999988778899999998 99999999999999999999999999998889
Q ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHH
Q 027498 85 LPDDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWG 163 (222)
Q Consensus 85 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~ 163 (222)
+|.++.+++.+++|..++.+.+...........+...+...+ +.+.++.+|+.|++++|++|+++|+||+++++.+.++
T Consensus 89 ~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~ 168 (211)
T PRK09481 89 MPVYPVARGESRLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRL 168 (211)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHH
Confidence 999999999999999887665444433333333445556667 9999999999999899999999999999999998776
Q ss_pred HHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHH
Q 027498 164 RIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELL 207 (222)
Q Consensus 164 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~ 207 (222)
... +.++. ...||+|++|++++.+||++++++...+...
T Consensus 169 ~~~----~~~~~-~~~~p~l~~w~~~~~~rp~~~~~~~~~~~~~ 207 (211)
T PRK09481 169 PVL----GIELS-GPGAKELKGYMTRVFERDSFLASLTEAEREM 207 (211)
T ss_pred Hhc----CCCCC-CCCChhHHHHHHHHhccHHHHHHcCHHHHHH
Confidence 432 44432 2479999999999999999999988765443
No 3
>PRK15113 glutathione S-transferase; Provisional
Probab=100.00 E-value=3.6e-35 Score=226.99 Aligned_cols=194 Identities=22% Similarity=0.283 Sum_probs=159.1
Q ss_pred CCCcceEEeecc--CCchHHHHHHHHHHhCCCceEEeCCCCC---CchhhhhhCCCCCcccEEEeCCeecchHHHHHHHH
Q 027498 1 MAEESVKLLGYW--ASPFALRVKWALKLKGVHYEYVEENLPN---KSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYI 75 (222)
Q Consensus 1 m~~~~~~L~~~~--~s~~~~~vr~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL 75 (222)
|+.+.++||+++ .||+|++++++|.++||+|+.+.++... ..++++++||. |+||+|+++|.+|+||.+|++||
T Consensus 1 ~~~~~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~-g~VP~L~~~~~~l~ES~aI~~YL 79 (214)
T PRK15113 1 MSKPAITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLT-RRVPTLQHDDFELSESSAIAEYL 79 (214)
T ss_pred CCCCeEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCC-CCCCEEEECCEEEecHHHHHHHH
Confidence 788889999976 6999999999999999999999998753 45889999998 99999999999999999999999
Q ss_pred HhhCCCCC---CCCCCHHHHHHHHHHHHHHhcccchhhhh-----hhcC--CcHHHHHHHH-HHHHHHHHHHHhcC-CCc
Q 027498 76 DEAWKQNP---LLPDDPYERANARFWAKFFDEKCVPEVMG-----AFAS--KGEEQEKAAK-ARENLKMLERALEG-KPF 143 (222)
Q Consensus 76 ~~~~~~~~---l~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~-~~~~l~~le~~L~~-~~~ 143 (222)
++.++++. ++|.++.+++++++|+.+++..+...... .+.. .+...+...+ +.+.++.+|+.|++ ++|
T Consensus 80 ~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~ 159 (214)
T PRK15113 80 EERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPGQPN 159 (214)
T ss_pred HHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 99998765 99999999999999999987655433211 1111 1223345566 99999999999975 479
Q ss_pred ccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHH
Q 027498 144 FGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHE 205 (222)
Q Consensus 144 l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 205 (222)
++|+ +|+||+++++.+.++... +.+. .|+|.+|++++.+||++++++++.++
T Consensus 160 l~G~-~TlADi~l~~~l~~~~~~----~~~~-----~p~l~~~~~r~~~rp~~~~~~~~~~~ 211 (214)
T PRK15113 160 LFGE-WCIADTDLALMLNRLVLH----GDEV-----PERLADYATFQWQRASVQRWLALSAK 211 (214)
T ss_pred eeCC-ccHHHHHHHHHHHHHHHc----CCCC-----CHHHHHHHHHHhcCHHHHHHHHHhhh
Confidence 9996 999999999998876321 3221 28999999999999999998876554
No 4
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=6.3e-35 Score=225.67 Aligned_cols=193 Identities=20% Similarity=0.239 Sum_probs=157.6
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQ 81 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~ 81 (222)
-||||+++.||+++||+++|.++||+|+.+.++.. ...++++++||. |+||+|+++|.+|+||.+|++||++.+++
T Consensus 2 ~~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~YL~~~~~~ 80 (214)
T PLN02473 2 VVKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPF-GQVPAIEDGDLKLFESRAIARYYATKYAD 80 (214)
T ss_pred ceEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCC-CCCCeEEECCEEEEehHHHHHHHHHHcCC
Confidence 38999999999999999999999999999988765 467888899998 99999999999999999999999999974
Q ss_pred C--CCCCCCHHHHHHHHHHHHHHhcccchhhh----h-hhcC------CcHHHHHHHH-HHHHHHHHHHHhcCCCcccCC
Q 027498 82 N--PLLPDDPYERANARFWAKFFDEKCVPEVM----G-AFAS------KGEEQEKAAK-ARENLKMLERALEGKPFFGGD 147 (222)
Q Consensus 82 ~--~l~p~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~------~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~ 147 (222)
. +++|.++.+++++++|..+..+.+..... . .+.. +.+..+...+ +.+.++.||+.|++++|++|+
T Consensus 81 ~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd 160 (214)
T PLN02473 81 QGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLATNRYLGGD 160 (214)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhccCCcccCC
Confidence 3 68999999999999999988776643321 1 1211 1233445566 999999999999988999999
Q ss_pred CCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCC
Q 027498 148 KIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPS 202 (222)
Q Consensus 148 ~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 202 (222)
++|+||+++++.+.++..... ...+ .++||+|++|++++.++|++++++..
T Consensus 161 ~~t~ADi~~~~~~~~~~~~~~--~~~~--~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 161 EFTLADLTHMPGMRYIMNETS--LSGL--VTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred CCCHHHHHHHHHHHHHHhccc--cHHH--HhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 999999999998877632111 1112 24899999999999999999987653
No 5
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=2.3e-34 Score=222.70 Aligned_cols=188 Identities=22% Similarity=0.279 Sum_probs=151.6
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEe-----CC--eecchHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVH-----NG--KPLAESLLIIEYI 75 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~-----~~--~~i~es~~I~~yL 75 (222)
||||+.+ +++|++|+++|+++||+|+.+.++.. ...++|+++||. |+||+|++ +| .+|+||.||++||
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~-gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL 79 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPN-NKIPAIVDHSPADGGEPLSLFESGAILLYL 79 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcC-CCCCEEEeCCCCCCCCceeEEcHHHHHHHH
Confidence 7899876 89999999999999999999999875 236789999998 99999996 45 4799999999999
Q ss_pred HhhCCCCCCCCCCHHHHHHHHHHHHHHhcccchhhhhh--hc-----CCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCC
Q 027498 76 DEAWKQNPLLPDDPYERANARFWAKFFDEKCVPEVMGA--FA-----SKGEEQEKAAK-ARENLKMLERALEGKPFFGGD 147 (222)
Q Consensus 76 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~ 147 (222)
++.++ .+.|.++.+++++++|+.+..+.+.+.+... +. .++...+...+ +.+.++.||++|.+++|++|+
T Consensus 80 ~~~~~--~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd 157 (215)
T PRK13972 80 AEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGE 157 (215)
T ss_pred HHhcC--CCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCC
Confidence 99986 3678889999999999999877666543221 11 12334455566 999999999999988999999
Q ss_pred CCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChH
Q 027498 148 KIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWH 204 (222)
Q Consensus 148 ~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (222)
++|+|||++++.+..... . + ++.+.||+|.+|++++.+||++++.+...+
T Consensus 158 ~~t~ADi~l~~~~~~~~~---~-~---~~~~~~P~l~~w~~r~~~rp~~~~~~~~~~ 207 (215)
T PRK13972 158 NYSIADIACWPWVNAWTR---Q-R---IDLAMYPAVKNWHERIRSRPATGQALLKAQ 207 (215)
T ss_pred CCCHHHHHHHHHHHHHhh---c-C---CcchhCHHHHHHHHHHHhCHHHHHHHHHhc
Confidence 999999999887644311 1 2 223589999999999999999998765543
No 6
>PRK10542 glutathionine S-transferase; Provisional
Probab=100.00 E-value=1.9e-34 Score=220.89 Aligned_cols=188 Identities=19% Similarity=0.346 Sum_probs=155.8
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC----CCchhhhhhCCCCCcccEEE-eCCeecchHHHHHHHHHhhCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP----NKSPLLLRYNPVYKKIPVLV-HNGKPLAESLLIIEYIDEAWK 80 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~----~~~~~~~~~~p~~~~vP~l~-~~~~~i~es~~I~~yL~~~~~ 80 (222)
|+||+.+.| ++++++++|+++||+|+.+.++.. ...+++.++||. |+||+|+ +||.+|+||.+|++||++.++
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~-g~vPvL~~~~g~~l~eS~aI~~YL~~~~~ 78 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPK-GQVPALLLDDGTLLTEGVAIMQYLADSVP 78 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcC-CCCCeEEeCCCcEeecHHHHHHHHHHhCc
Confidence 689998755 799999999999999999998875 234789999998 9999998 588899999999999999998
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHHhcccchhhhhhhcCC--cHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHH
Q 027498 81 QNPLL-PDDPYERANARFWAKFFDEKCVPEVMGAFASK--GEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAV 156 (222)
Q Consensus 81 ~~~l~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l 156 (222)
+++++ |.++.+++++++|+.++.+.+.+.+...+... ++..+...+ +.+.++.||+.|++++|++|+++|+||+++
T Consensus 79 ~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l 158 (201)
T PRK10542 79 DRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYL 158 (201)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHH
Confidence 77766 66788999999999988777666555544422 222244556 999999999999988999999999999999
Q ss_pred HhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCC
Q 027498 157 GWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPS 202 (222)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 202 (222)
++++.+.... +.+ ...+|+|.+|++++.++|++++++.+
T Consensus 159 ~~~~~~~~~~----~~~---~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 159 FTVLRWAYAV----KLN---LEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HHHHHHhhcc----CCC---cccchHHHHHHHHHHcCHHHHHHHHH
Confidence 9988876322 322 34899999999999999999998754
No 7
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-34 Score=206.31 Aligned_cols=195 Identities=30% Similarity=0.465 Sum_probs=164.7
Q ss_pred CCCcceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC----CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 1 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLP----NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 1 m~~~~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~----~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
|++.+++||+++.|.+++|||++|+.+||+|+.+++++- ....+|..+||. ++||+|++||.++.||.||++||+
T Consensus 1 ~~~~KpiLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm-~kVP~L~i~g~tl~eS~AII~YLe 79 (217)
T KOG0868|consen 1 SSAAKPILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPM-EKVPTLVIDGLTLTESLAIIEYLE 79 (217)
T ss_pred CCcccchhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCch-hhCCeEEECCEEeehHHHHHHHHH
Confidence 456689999999999999999999999999999999875 335689999999 899999999999999999999999
Q ss_pred hhCCCCCCCCCCHHHHHHHHHHHHHHhcccchhh----hhhhcCCcH--HHHHHHH-HHHHHHHHHHHhc--CCCcccCC
Q 027498 77 EAWKQNPLLPDDPYERANARFWAKFFDEKCVPEV----MGAFASKGE--EQEKAAK-ARENLKMLERALE--GKPFFGGD 147 (222)
Q Consensus 77 ~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~-~~~~l~~le~~L~--~~~~l~G~ 147 (222)
+.+|+++|+|+++..|+.++++...+.+.+.+.- ....+.... ...=+.. +.+.|..||+.|. .+.|.+||
T Consensus 80 Et~P~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGD 159 (217)
T KOG0868|consen 80 ETYPDPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGD 159 (217)
T ss_pred hcCCCCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCc
Confidence 9999999999999999999999999888877642 222221111 1222345 9999999999996 46899999
Q ss_pred CCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCCh
Q 027498 148 KIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSW 203 (222)
Q Consensus 148 ~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 203 (222)
++|+||+++.+.+...+.+ . ++-..||.+.|..+.+.+.|.|+...++.
T Consensus 160 evtiADl~L~pqv~nA~rf----~---vdl~PYPti~ri~e~l~elpaFq~ahP~n 208 (217)
T KOG0868|consen 160 EVTIADLCLPPQVYNANRF----H---VDLTPYPTITRINEELAELPAFQAAHPDN 208 (217)
T ss_pred eeehhhhccchhhhhhhhc----c---ccCCcCchHHHHHHHHHhCHHHHhcCCCC
Confidence 9999999999998877543 3 23458999999999999999999887654
No 8
>PRK10357 putative glutathione S-transferase; Provisional
Probab=100.00 E-value=7.3e-34 Score=217.87 Aligned_cols=191 Identities=24% Similarity=0.320 Sum_probs=155.2
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEE-eCCeecchHHHHHHHHHhhCCCCCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV-HNGKPLAESLLIIEYIDEAWKQNPL 84 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~-~~~~~i~es~~I~~yL~~~~~~~~l 84 (222)
|+||+++.||++++||++|+++||+|+.+.++......++.+.||. |+||+|+ ++|.+++||.+|++||++.++++.+
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~~~~~~~~nP~-g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~l 79 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPL-GKVPALVTEEGECWFDSPIIAEYIELLNVAPAM 79 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCCCCchhhhhcCCc-cCCCeEEeCCCCeeecHHHHHHHHHHhCCCCCC
Confidence 5899999999999999999999999999998876666778889998 9999998 6789999999999999999987779
Q ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhh---c----CCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHH
Q 027498 85 LPDDPYERANARFWAKFFDEKCVPEVMGAF---A----SKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAV 156 (222)
Q Consensus 85 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l 156 (222)
+|.++.+++++++|..+.++.+...+.... . ..++..+...+ +.+.|+.||++|.+++ ++|+++|+||+++
T Consensus 80 ~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l 158 (202)
T PRK10357 80 LPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAI 158 (202)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHH
Confidence 999999999999998877655433321111 1 11223345566 9999999999998777 9999999999999
Q ss_pred HhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCC
Q 027498 157 GWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPS 202 (222)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 202 (222)
++.+.++... ........+||++.+|++++.+||+++++.++
T Consensus 159 ~~~l~~~~~~----~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~~ 200 (202)
T PRK10357 159 ACAVGYLNFR----RVAPGWCVDRPHLVKLVENLFQRESFARTEPP 200 (202)
T ss_pred HHHHHHHHhc----ccCcchhhcChHHHHHHHHHhcChhhhhcCCC
Confidence 9998876431 11111124799999999999999999998765
No 9
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=100.00 E-value=1.2e-33 Score=217.85 Aligned_cols=189 Identities=32% Similarity=0.471 Sum_probs=155.0
Q ss_pred EEeeccCCchHHHHHHHHHHhCCCceEEeCCCC----CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCCC
Q 027498 7 KLLGYWASPFALRVKWALKLKGVHYEYVEENLP----NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN 82 (222)
Q Consensus 7 ~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~----~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~~ 82 (222)
+||++..||+++++|++|.++||+|+.+.++.. ...+++.++||. |+||+|+++|.+|+||.+|++||++.+++.
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~ 79 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQ-GLVPTLDIDGEVLTQSLAIIEYLEETYPDP 79 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCC-CcCCEEEECCEEeecHHHHHHHHHHhCCCC
Confidence 589899999999999999999999999998852 246789999998 999999999999999999999999999877
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcccchh----hhhhhc----CCcHH-HHHHHH-HHHHHHHHHHHhcC--CCcccCCCCC
Q 027498 83 PLLPDDPYERANARFWAKFFDEKCVPE----VMGAFA----SKGEE-QEKAAK-ARENLKMLERALEG--KPFFGGDKIG 150 (222)
Q Consensus 83 ~l~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~-~~~~~~-~~~~l~~le~~L~~--~~~l~G~~~t 150 (222)
.++|.++.+++++++|..++...+... +...+. ..++. .+...+ +.+.++.||++|++ ++|++|+++|
T Consensus 80 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T 159 (210)
T TIGR01262 80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPT 159 (210)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCC
Confidence 799999999999999998886554432 111111 12222 233456 99999999999986 4699999999
Q ss_pred hhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCCh
Q 027498 151 FLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSW 203 (222)
Q Consensus 151 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 203 (222)
+|||++++++.++... ... .++||+|++|+++|.+||+++++..+.
T Consensus 160 ~ADi~~~~~l~~~~~~----~~~---~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 160 LADLCLVPQVYNAERF----GVD---LTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred HHHHHHHHHHHHHHHc----CCC---cccchHHHHHHHHHhcCHHHHHhCccc
Confidence 9999999998876321 221 348999999999999999999988754
No 10
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=1.2e-33 Score=218.78 Aligned_cols=192 Identities=21% Similarity=0.294 Sum_probs=154.6
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQ 81 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~ 81 (222)
.+|||+.+. ++++|++++|.++|++|+.+.++.. ...+++++.||. |+||+|+++|.+|+||.+|++||+++++.
T Consensus 2 ~~~ly~~~~-~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~~~~l~ES~aI~~YL~~~~~~ 79 (215)
T PLN02395 2 VLKVYGPAF-ASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPF-GVVPVIVDGDYKIFESRAIMRYYAEKYRS 79 (215)
T ss_pred eEEEEcCCc-CcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHHHcCC
Confidence 389998654 5799999999999999999998865 456789999998 99999999999999999999999999974
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHhcccchhhhhh-----h------cCCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCC
Q 027498 82 --NPLLPDDPYERANARFWAKFFDEKCVPEVMGA-----F------ASKGEEQEKAAK-ARENLKMLERALEGKPFFGGD 147 (222)
Q Consensus 82 --~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~ 147 (222)
++++|.++.+++++++|+.+.+..+.+.+... + ...++..+...+ +.+.++.||+.|++++|++|+
T Consensus 80 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~ 159 (215)
T PLN02395 80 QGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSKYLAGD 159 (215)
T ss_pred CCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCccccCC
Confidence 35999999999999999998776655443221 1 112223345566 999999999999988999999
Q ss_pred CCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCC
Q 027498 148 KIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPS 202 (222)
Q Consensus 148 ~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 202 (222)
++|+||+++++++.++... .+.. .....||+|++|++++.++|++++++..
T Consensus 160 ~~s~ADi~l~~~~~~~~~~---~~~~-~~~~~~p~L~~w~~~~~~rp~~k~~~~~ 210 (215)
T PLN02395 160 FVSLADLAHLPFTEYLVGP---IGKA-YLIKDRKHVSAWWDDISSRPAWKEVLAK 210 (215)
T ss_pred CcCHHHHHHHHHHHHHhcc---cchh-hhhccCchHHHHHHHHHcChHHHHHHHH
Confidence 9999999999987766311 0111 1134799999999999999999998654
No 11
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=100.00 E-value=1.1e-32 Score=213.71 Aligned_cols=192 Identities=19% Similarity=0.201 Sum_probs=155.4
Q ss_pred ccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCC---CCCCCC
Q 027498 11 YWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQ---NPLLPD 87 (222)
Q Consensus 11 ~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~---~~l~p~ 87 (222)
...||+|++|+++|.++||+|+.+.+++..++++|+++||. |+||+|+++|.+|+||.+|++||++.++. +++.|.
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~~~~~fl~inP~-g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~ 94 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPEDLQNLAPG-THPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPK 94 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCCCCCHHHHHHCcC-CCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCC
Confidence 45799999999999999999999999999888999999998 99999999999999999999999999964 446677
Q ss_pred CHHHHHHHHHHHHHHhcccchhhhhhhc-CCcHHHHHHHH-HHHHHHHHHHHhc------------------CCCcccCC
Q 027498 88 DPYERANARFWAKFFDEKCVPEVMGAFA-SKGEEQEKAAK-ARENLKMLERALE------------------GKPFFGGD 147 (222)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~le~~L~------------------~~~~l~G~ 147 (222)
++..++....+ ...+..++. ..++..+...+ +.+.+..||+.|. +++|+.|+
T Consensus 95 ~~~~~~~~~~l--------~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd 166 (236)
T TIGR00862 95 HPESNTAGLDI--------FAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGD 166 (236)
T ss_pred CHHHHHHHHHH--------HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCC
Confidence 76665543211 111111112 22334455566 8999999999996 47899999
Q ss_pred CCChhHHHHHhHHHHHHHH-HHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHHHHhhhh
Q 027498 148 KIGFLDIAVGWIGIWGRIV-EEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNKGF 213 (222)
Q Consensus 148 ~~t~aD~~l~~~l~~~~~~-~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 213 (222)
++|+|||++++.+.++... .+..+.++ .+++|+|.+|++++.++|+|+++++..+.+...++..
T Consensus 167 ~~tlaD~~l~p~l~~l~~~~~~~~~~~i--~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~ 231 (236)
T TIGR00862 167 ELTLADCNLLPKLHIVKVVAKKYRNFDI--PAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADV 231 (236)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhCcCc--cccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHH
Confidence 9999999999999998764 23345555 4599999999999999999999999999998887765
No 12
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-33 Score=215.70 Aligned_cols=184 Identities=34% Similarity=0.523 Sum_probs=158.0
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC--CCchhhhhhCCCCCcccEEEeCCe-ecchHHHHHHHHHhhCCCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP--NKSPLLLRYNPVYKKIPVLVHNGK-PLAESLLIIEYIDEAWKQN 82 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~--~~~~~~~~~~p~~~~vP~l~~~~~-~i~es~~I~~yL~~~~~~~ 82 (222)
++||+.+.||+|++|+++|.++|++|+.+.++.. ...++|.++||. |+||+|++++. +|.||.+|++||+++||++
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~-gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPL-GKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCC-CCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 6899999999999999999999999999999987 478899999998 99999997665 8999999999999999977
Q ss_pred CCCCCCHH---HHHHHHHHHHHHhcccchhhhhhhcC--------CcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCC
Q 027498 83 PLLPDDPY---ERANARFWAKFFDEKCVPEVMGAFAS--------KGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIG 150 (222)
Q Consensus 83 ~l~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t 150 (222)
+++|.++. +|+.+..|..+....+.+.+...... .....+...+ +...++.+|..|++++|++|+++|
T Consensus 80 ~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t 159 (211)
T COG0625 80 PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFT 159 (211)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCC
Confidence 79998875 78888899999888777776654332 2444566677 999999999999999999999999
Q ss_pred hhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhh
Q 027498 151 FLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIK 197 (222)
Q Consensus 151 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 197 (222)
+||+++++.+.++... +... +.+|++.+|++|+.++|+++
T Consensus 160 iAD~~~~~~~~~~~~~----~~~~---~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 160 IADIALAPLLWRLALL----GEEL---ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHhhhc----Cccc---ccChHHHHHHHHHHcCCchh
Confidence 9999999998886332 2222 47999999999999999965
No 13
>PRK11752 putative S-transferase; Provisional
Probab=100.00 E-value=1.7e-32 Score=217.83 Aligned_cols=195 Identities=19% Similarity=0.230 Sum_probs=152.2
Q ss_pred ceEEeeccCCchHHHHHHHHHHh------CCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeC----CeecchHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLK------GVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHN----GKPLAESLLI 71 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~------gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~----~~~i~es~~I 71 (222)
+|+||+.+ ||+|+||+++|+++ |++|+.+.++.. ...+++.++||. |+||+|+++ +.+|+||.+|
T Consensus 44 ~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~-GkVP~Lv~~dg~~~~~L~ES~AI 121 (264)
T PRK11752 44 PLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPN-SKIPALLDRSGNPPIRVFESGAI 121 (264)
T ss_pred CeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCC-CCCCEEEeCCCCCCeEEEcHHHH
Confidence 69999865 99999999999997 999999998865 346789999998 999999974 3689999999
Q ss_pred HHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhcccchh---hhhhhc--CC--cHHHHHHHH-HHHHHHHHHHHhcCCCc
Q 027498 72 IEYIDEAWKQNPLLPDDPYERANARFWAKFFDEKCVPE---VMGAFA--SK--GEEQEKAAK-ARENLKMLERALEGKPF 143 (222)
Q Consensus 72 ~~yL~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~--~~~~~~~~~-~~~~l~~le~~L~~~~~ 143 (222)
++||++.++. ++|.++.+++.+++|+.+....+... ....+. .. +...+...+ +.+.|+.||++|++++|
T Consensus 122 l~YL~~~~~~--L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~f 199 (264)
T PRK11752 122 LLYLAEKFGA--FLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEY 199 (264)
T ss_pred HHHHHHhcCC--cCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999873 89999999999999998876543111 111121 11 122344556 89999999999998899
Q ss_pred ccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCCh
Q 027498 144 FGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSW 203 (222)
Q Consensus 144 l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 203 (222)
++|+++|+|||++++.+.++............+.+.||++.+|++++.++|++++++...
T Consensus 200 l~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~ 259 (264)
T PRK11752 200 IAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIVN 259 (264)
T ss_pred CCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhcc
Confidence 999999999999999887763211000111222458999999999999999999987654
No 14
>PLN02378 glutathione S-transferase DHAR1
Probab=100.00 E-value=1.3e-31 Score=206.77 Aligned_cols=187 Identities=20% Similarity=0.281 Sum_probs=145.9
Q ss_pred ccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCCCCCCCCCHH
Q 027498 11 YWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPDDPY 90 (222)
Q Consensus 11 ~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~~~l~p~~~~ 90 (222)
+..||||+||+++|+++|++|+.+.+++..++++|+++||. |+||+|+++|.+|.||.+|++||++++++..+. ++.
T Consensus 17 ~~~~p~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~l~inP~-G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l~--~~~ 93 (213)
T PLN02378 17 LGDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQ-GKVPVLKIDDKWVTDSDVIVGILEEKYPDPPLK--TPA 93 (213)
T ss_pred CCCCcchHHHHHHHHHcCCCCeEEEeCcccCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHhCCCCCCC--CHH
Confidence 45699999999999999999999999998888899999998 999999999999999999999999999876553 566
Q ss_pred HHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhc--CCCcccCCCCChhHHHHHhHHHHHHHHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALE--GKPFFGGDKIGFLDIAVGWIGIWGRIVE 167 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~--~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (222)
+++.+...+. ..+...+... ...+...+ +.+.++.+|+.|+ +++|++|+++|+||+++++.+.++....
T Consensus 94 ~~a~i~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~ 165 (213)
T PLN02378 94 EFASVGSNIF-------GTFGTFLKSK-DSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVAL 165 (213)
T ss_pred HHHHHHHHHH-------HHHHHHHhcC-ChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHH
Confidence 7776654321 1122222211 12233445 8888999999997 4789999999999999999988764321
Q ss_pred H-HhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHHHHh
Q 027498 168 E-IAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHN 210 (222)
Q Consensus 168 ~-~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 210 (222)
. ....+. .+.||++++|++++.++|++++++......+...
T Consensus 166 ~~~~~~~~--~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~~~~~ 207 (213)
T PLN02378 166 GHFKSWSV--PESFPHVHNYMKTLFSLDSFEKTKTEEKYVISGW 207 (213)
T ss_pred HHhcCCCc--hhHhHHHHHHHHHHhcCCCeecccCChHHHHHHH
Confidence 1 112222 2489999999999999999999998887766543
No 15
>PTZ00057 glutathione s-transferase; Provisional
Probab=100.00 E-value=1.2e-31 Score=206.04 Aligned_cols=190 Identities=18% Similarity=0.174 Sum_probs=141.7
Q ss_pred CCCcceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhh--------hhCCCCCcccEEEeCCeecchHHHHH
Q 027498 1 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLL--------RYNPVYKKIPVLVHNGKPLAESLLII 72 (222)
Q Consensus 1 m~~~~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~--------~~~p~~~~vP~l~~~~~~i~es~~I~ 72 (222)
|++ +++|||++.++++++||++|+++|++|+.+.++.. .+++. ..||. |+||+|++||.+|+||.||+
T Consensus 1 m~~-~~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~~--~~~~~~~~~~~~~~~nP~-g~vP~L~~~~~~l~eS~AI~ 76 (205)
T PTZ00057 1 MAE-EIVLYYFDARGKAELIRLIFAYLGIEYTDKRFGEN--GDAFIEFKNFKKEKDTPF-EQVPILEMDNIIFAQSQAIV 76 (205)
T ss_pred CCC-ceEEEecCCCcchHHHHHHHHHcCCCeEEEecccc--chHHHHHHhccccCCCCC-CCCCEEEECCEEEecHHHHH
Confidence 775 59999999999999999999999999999977532 12332 47998 99999999999999999999
Q ss_pred HHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcCC--CcccCCCC
Q 027498 73 EYIDEAWKQNPLLPDDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGK--PFFGGDKI 149 (222)
Q Consensus 73 ~yL~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~~--~~l~G~~~ 149 (222)
+||+++++ +.+.+..++..+..+.....+.........+. .+...+...+ +.+.+..||+.|+++ +|++|+++
T Consensus 77 ~YLa~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~ 152 (205)
T PTZ00057 77 RYLSKKYK---ICGESELNEFYADMIFCGVQDIHYKFNNTNLF-KQNETTFLNEELPKWSGYFENILKKNHCNYFVGDNL 152 (205)
T ss_pred HHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcc
Confidence 99999997 55666555555554443332221111110110 1122233445 999999999999753 79999999
Q ss_pred ChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChH
Q 027498 150 GFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWH 204 (222)
Q Consensus 150 t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (222)
|+||+++++++.++... .+. . .++||+|++|++++.++|++++++.++.
T Consensus 153 T~AD~~l~~~~~~~~~~---~~~-~--l~~~P~l~~~~~r~~~~P~~k~y~~~~~ 201 (205)
T PTZ00057 153 TYADLAVFNLYDDIETK---YPN-S--LKNFPLLKAHNEFISNLPNIKNYISNRK 201 (205)
T ss_pred cHHHHHHHHHHHHHHHh---Chh-h--hccChhHHHHHHHHHhChHHHHHHHhCC
Confidence 99999999988876421 111 1 3489999999999999999999987653
No 16
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.98 E-value=1.5e-30 Score=205.84 Aligned_cols=187 Identities=21% Similarity=0.328 Sum_probs=147.7
Q ss_pred CCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCCCCCCCCCHHHH
Q 027498 13 ASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPDDPYER 92 (222)
Q Consensus 13 ~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~~~l~p~~~~~~ 92 (222)
.||+|++++++|+++||+|+.+.++...++++|+++||. |+||+|+++|..|.||.+|++||++.++++.+. ++.++
T Consensus 72 ~cp~s~rV~i~L~ekgi~ye~~~vdl~~~~~~fl~iNP~-GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~--~~~er 148 (265)
T PLN02817 72 DCPFCQRVLLTLEEKHLPYDMKLVDLTNKPEWFLKISPE-GKVPVVKLDEKWVADSDVITQALEEKYPDPPLA--TPPEK 148 (265)
T ss_pred CCcHHHHHHHHHHHcCCCCEEEEeCcCcCCHHHHhhCCC-CCCCEEEECCEEEecHHHHHHHHHHHCCCCCCC--CHHHH
Confidence 499999999999999999999999998888999999998 999999998889999999999999999987664 56788
Q ss_pred HHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcC-CCcccCCCCChhHHHHHhHHHHHHHHHH-H
Q 027498 93 ANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEG-KPFFGGDKIGFLDIAVGWIGIWGRIVEE-I 169 (222)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~-~~~l~G~~~t~aD~~l~~~l~~~~~~~~-~ 169 (222)
+.++.++.. .+...+.... ..+...+ +.+.++.||+.|.+ ++|++|+++|+|||++++.+.++..... .
T Consensus 149 a~i~~~l~~-------~~~~~~~~~~-~~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~ 220 (265)
T PLN02817 149 ASVGSKIFS-------TFIGFLKSKD-PGDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHY 220 (265)
T ss_pred HHHHHHHHH-------HHHHHhccCC-cchHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 887765421 1112222111 1122235 78889999999974 6999999999999999999887753211 1
Q ss_pred hcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHHHHhhh
Q 027498 170 AGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNKG 212 (222)
Q Consensus 170 ~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 212 (222)
.+.++ .+.||+|.+|++++.++|+|+++.+..+.+...+..
T Consensus 221 ~~~~i--~~~~P~L~~w~~ri~~rps~~~~~~~~~~~~~~~~~ 261 (265)
T PLN02817 221 KNWSV--PDSLPFVKSYMKNIFSMESFVKTRALPEDVIAGWRP 261 (265)
T ss_pred cCCCc--cccCHHHHHHHHHHhcchhHhhcCCCHHHHHHHhHh
Confidence 12233 348999999999999999999999988777666544
No 17
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=5.8e-30 Score=198.68 Aligned_cols=196 Identities=27% Similarity=0.348 Sum_probs=165.0
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCC-
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWK- 80 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~- 80 (222)
+++||+++.|+.|++|.+++.++|++|+.+.++.. +..++|+++||. |+||+|+++|..+.||.||+.||++.|.
T Consensus 2 ~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~-~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~ 80 (226)
T KOG0867|consen 2 KLKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPL-GKVPALEDGGLTLWESHAILRYLAEKYGP 80 (226)
T ss_pred CceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcC-CCCCeEecCCeEEeeHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999977665 778999999998 8999999999999999999999999986
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHHhcccchhh--hhhhc-----C--CcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCC
Q 027498 81 QNP-LLPDDPYERANARFWAKFFDEKCVPEV--MGAFA-----S--KGEEQEKAAK-ARENLKMLERALEGKPFFGGDKI 149 (222)
Q Consensus 81 ~~~-l~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~--~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~ 149 (222)
... ++|.+..+++.+++|+.+..+.+.+.. ...+. . +....+.... +.+.++.+|+.|.++.|+.|+++
T Consensus 81 ~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~ 160 (226)
T KOG0867|consen 81 LGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQL 160 (226)
T ss_pred CCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCcc
Confidence 334 899999999999999999888877763 33222 2 4555666677 99999999999999999999999
Q ss_pred ChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHH
Q 027498 150 GFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHE 205 (222)
Q Consensus 150 t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 205 (222)
|+||+.+.+.+..+.. .. . ......+||++.+|++++.++|++++.......
T Consensus 161 tlADl~~~~~~~~~~~--~~-~-~~~~~~~~p~v~~W~~~~~~~P~~~e~~~~~~~ 212 (226)
T KOG0867|consen 161 TLADLSLASTLSQFQG--KF-A-TEKDFEKYPKVARWYERIQKRPAYEEANEKGAA 212 (226)
T ss_pred cHHHHHHhhHHHHHhH--hh-h-hhhhhhhChHHHHHHHHHHhCccHHHHHHHHHH
Confidence 9999999998887732 11 1 112356999999999999999998886554433
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.97 E-value=5.4e-30 Score=197.52 Aligned_cols=177 Identities=20% Similarity=0.207 Sum_probs=135.3
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEE-eCCeecchHHHHHHHHHhhCCCCCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV-HNGKPLAESLLIIEYIDEAWKQNPL 84 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~-~~~~~i~es~~I~~yL~~~~~~~~l 84 (222)
|+||+++.||+|+++|++|+++||+|+.+.++...... ....||. |+||+|+ ++|..++||.+|++||+++|+++.+
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~~~~-~~~~~p~-~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~l 78 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLANDDEAT-PIRMIGQ-KQVPILQKDDGSYMPESLDIVHYIDELDGKPLL 78 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCCchhh-HHHhcCC-cccceEEecCCeEecCHHHHHHHHHHhCCCccC
Confidence 68999999999999999999999999999886543222 2578897 8999995 7899999999999999999986544
Q ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhhcC-------CcH---------------------HHHHHHH-HHHHHHHHH
Q 027498 85 LPDDPYERANARFWAKFFDEKCVPEVMGAFAS-------KGE---------------------EQEKAAK-ARENLKMLE 135 (222)
Q Consensus 85 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---------------------~~~~~~~-~~~~l~~le 135 (222)
.+ .+++.++.|+.+....+...+...+.. .+. ..+...+ +.+.|+.+|
T Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le 155 (210)
T PRK10387 79 TG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALD 155 (210)
T ss_pred CC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHH
Confidence 32 256778888877654443332221110 000 0023456 999999999
Q ss_pred HHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhh
Q 027498 136 RALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVI 196 (222)
Q Consensus 136 ~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (222)
++|++ +|++|+++|+||+++++.+.++... . .++ .+|+|.+|++||.+||++
T Consensus 156 ~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~----~--~~~--~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 156 PLIVK-PNAVNGELSTDDIHLFPILRNLTLV----K--GIE--WPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HHhcC-ccccCCCCCHHHHHHHHHHhcceee----c--CCC--CCHHHHHHHHHHHHHhCC
Confidence 99987 9999999999999999999887432 1 122 469999999999999976
No 19
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=7.5e-29 Score=186.76 Aligned_cols=192 Identities=21% Similarity=0.246 Sum_probs=159.9
Q ss_pred cceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCCCC
Q 027498 4 ESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNP 83 (222)
Q Consensus 4 ~~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~~~ 83 (222)
+.++|+||+.+++++.+|++++..|++|+++.+...+.-...+...|+ ||+|+|..||..|.||.||++||+++++
T Consensus 2 ~~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~w~~~K~~~pf-gqlP~l~vDg~~i~QS~AI~RyLArk~g--- 77 (206)
T KOG1695|consen 2 PPYKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITMEDAWEELKDKMPF-GQLPVLEVDGKKLVQSRAILRYLARKFG--- 77 (206)
T ss_pred CceEEEecCcchhHHHHHHHHHhcCCCcceeeeccccchhhhcccCCC-CCCCEEeECCEeeccHHHHHHHHHHHhC---
Confidence 469999999999999999999999999999999866533344556897 9999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhcccchhhhhhhcCC-----cHHHH-HHHH-HHHHHHHHHHHhc--CCCcccCCCCChhHH
Q 027498 84 LLPDDPYERANARFWAKFFDEKCVPEVMGAFASK-----GEEQE-KAAK-ARENLKMLERALE--GKPFFGGDKIGFLDI 154 (222)
Q Consensus 84 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~-~~~~l~~le~~L~--~~~~l~G~~~t~aD~ 154 (222)
+.++++.+.+.++.+++-..+.....+...+... .+..+ .... ....+..+++.|. +++|++|+++|+||+
T Consensus 78 l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl 157 (206)
T KOG1695|consen 78 LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADL 157 (206)
T ss_pred cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHH
Confidence 9999999999999999988888777555544421 11222 4455 8899999999997 568999999999999
Q ss_pred HHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChH
Q 027498 155 AVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWH 204 (222)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (222)
.++..+..+... +..+..+ .+|.|.++.+++.++|.+++++.++.
T Consensus 158 ~i~e~l~~l~~~---~~~~~~~--~~P~L~a~~~kv~~~p~ik~~i~~r~ 202 (206)
T KOG1695|consen 158 VIAEHLDTLEEL---LDPSALD--HFPKLKAFKERVSSIPNIKKYLESRP 202 (206)
T ss_pred HHHHHHHHHHHh---cCchhhc--cChHHHHHHHHHhcCchHHHHHhcCC
Confidence 999998888542 2444433 78999999999999999999988764
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.96 E-value=6.1e-28 Score=185.81 Aligned_cols=175 Identities=21% Similarity=0.267 Sum_probs=130.5
Q ss_pred EEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEE-eCCeecchHHHHHHHHHhhCCCCCCC
Q 027498 7 KLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV-HNGKPLAESLLIIEYIDEAWKQNPLL 85 (222)
Q Consensus 7 ~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~-~~~~~i~es~~I~~yL~~~~~~~~l~ 85 (222)
+||++..||+|+|||++|.++|++|+.+.++.... ....+.||. |+||+|+ ++|..+.||.+|++||+++|+.+.+.
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~~~-~~~~~~np~-g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~~~ 78 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLNDDE-ETPIRMIGA-KQVPILQKDDGRAMPESLDIVAYFDKLDGEPLLT 78 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCCcc-hhHHHhcCC-CCcceEEeeCCeEeccHHHHHHHHHHhCCCccCC
Confidence 68999999999999999999999999987755432 234789998 8999998 88899999999999999999764333
Q ss_pred CCCHHHHHHHHHHHHHHhcccchhhhhhhcC-----------------CcHH-----------HHHHHH-HHHHHHHHHH
Q 027498 86 PDDPYERANARFWAKFFDEKCVPEVMGAFAS-----------------KGEE-----------QEKAAK-ARENLKMLER 136 (222)
Q Consensus 86 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-----------~~~~~~-~~~~l~~le~ 136 (222)
|. .+..+++|+.+....+...+...+.. ..+. .+...+ +.+.|+.+|+
T Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~ 155 (209)
T TIGR02182 79 GK---VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDK 155 (209)
T ss_pred CC---ChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHH
Confidence 32 35566676665544433322211110 0000 034556 8999999999
Q ss_pred HhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCccc-HHHHHHHHHhcchhh
Q 027498 137 ALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMP-LLTAWLNNFLEVPVI 196 (222)
Q Consensus 137 ~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~ 196 (222)
+|++++|+.| ++|+||+++++.+.++... + ...+| +|.+|++||.+++++
T Consensus 156 ~L~~~~~l~g-~~TiADi~l~~~l~~~~~~----~-----~~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 156 LIDGPNAVNG-ELSEDDILVFPLLRNLTLV----A-----GINWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHhCccccCC-CCCHHHHHHHHHhcCeeee----c-----CCCCChHHHHHHHHHHHHhCC
Confidence 9999999965 6999999999998887321 1 11366 999999999998875
No 21
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.94 E-value=1.3e-25 Score=169.72 Aligned_cols=207 Identities=17% Similarity=0.242 Sum_probs=151.1
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQ 81 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~ 81 (222)
.+.||+++.|--+|+||++++++||.|+...|++. ...++|...||. |.||+++++..+|.++..|++|+++.+-+
T Consensus 26 ~~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~-gevPVl~~g~~II~d~tqIIdYvErtf~g 104 (325)
T KOG4420|consen 26 SLVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPG-GEVPVLIHGDNIISDYTQIIDYVERTFTG 104 (325)
T ss_pred cceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCC-CCCceEecCCeecccHHHHHHHHHHhhcc
Confidence 38999999999999999999999999999999877 667999999997 99999999999999999999999998854
Q ss_pred -CCCCCC-CHHHHHHHHH---HHHH------Hhcc----------cchhhh---h--------hh---c-----------
Q 027498 82 -NPLLPD-DPYERANARF---WAKF------FDEK----------CVPEVM---G--------AF---A----------- 115 (222)
Q Consensus 82 -~~l~p~-~~~~~~~~~~---~~~~------~~~~----------~~~~~~---~--------~~---~----------- 115 (222)
+.|.|. +..+..++.. .++. -.+. ..|.+. . +. .
T Consensus 105 er~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~ 184 (325)
T KOG4420|consen 105 ERVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYL 184 (325)
T ss_pred cccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHH
Confidence 456674 1112222211 1110 0000 011111 0 00 0
Q ss_pred -------------CCcHHHHHHHH-HHHHHHHHHHHhcC----CCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCC
Q 027498 116 -------------SKGEEQEKAAK-ARENLKMLERALEG----KPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDA 177 (222)
Q Consensus 116 -------------~~~~~~~~~~~-~~~~l~~le~~L~~----~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~ 177 (222)
.+....++... +..+|+..|+.|.+ ..||+|+.+|+||+.+.++|+++....- .......
T Consensus 185 akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~--e~~yw~~ 262 (325)
T KOG4420|consen 185 AKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGL--EKKYWED 262 (325)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHccc--HHHhccc
Confidence 11112234455 88888889999976 5799999999999999999999965421 1112224
Q ss_pred CcccHHHHHHHHHhcchhhhhcCCChHHHHHHhhhhh
Q 027498 178 ETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNKGFH 214 (222)
Q Consensus 178 ~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 214 (222)
.+.|+|.+|++|+.+|++|++++.+...++.....++
T Consensus 263 gsrpnle~Yf~rvrrR~sf~kvlg~~fnilr~~~~~~ 299 (325)
T KOG4420|consen 263 GSRPNLESYFERVRRRFSFRKVLGDIFNILRFRLVKR 299 (325)
T ss_pred CCCccHHHHHHHHHhhhHHHHhhhhHHHHHHHHHHHh
Confidence 5899999999999999999999999888887544433
No 22
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.90 E-value=3.4e-22 Score=147.14 Aligned_cols=193 Identities=22% Similarity=0.259 Sum_probs=153.7
Q ss_pred CCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCCCCCCCCCHHHH
Q 027498 13 ASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPDDPYER 92 (222)
Q Consensus 13 ~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~~~l~p~~~~~~ 92 (222)
.||+||++.|.|..+|++|..+.||...++++|.++.|. |++|+|..|+..+.||..|.++|++.+|.+++.--++.+.
T Consensus 20 dcpf~qr~~m~L~~k~~~f~vttVd~~~kp~~f~~~sp~-~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~~E~ 98 (221)
T KOG1422|consen 20 DCPFCQRLFMTLELKGVPFKVTTVDLSRKPEWFLDISPG-GKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAPPES 98 (221)
T ss_pred CChhHHHHHHHHHHcCCCceEEEeecCCCcHHHHhhCCC-CCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCCHHH
Confidence 589999999999999999999999999999999999998 8999999999999999999999999998765432222233
Q ss_pred HHHHHHHHHHhcccchhhhhh-hcCCcHHHHHHHH-HHHHHHHHHHHhcC---CCcccCCCCChhHHHHHhHHHHHHHHH
Q 027498 93 ANARFWAKFFDEKCVPEVMGA-FASKGEEQEKAAK-ARENLKMLERALEG---KPFFGGDKIGFLDIAVGWIGIWGRIVE 167 (222)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~~le~~L~~---~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (222)
+.+ ...++..+..+ ..+.+...+...+ +.+.+..|+.+|+. ++|+.|+++|.|||.++|-|+.++...
T Consensus 99 asa-------g~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~ 171 (221)
T KOG1422|consen 99 ASA-------GSDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAA 171 (221)
T ss_pred Hhh-------HHHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHH
Confidence 222 11222222222 2333444455556 88888999999974 789999999999999999999997644
Q ss_pred HH-hcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHHHHhhhhhh
Q 027498 168 EI-AGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNKGFHK 215 (222)
Q Consensus 168 ~~-~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 215 (222)
.. .++++ ++..+.|.+|++.+.++++|..+.+..+.+...+.....
T Consensus 172 k~yk~~~I--P~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~~~~ 218 (221)
T KOG1422|consen 172 KHYKNFEI--PASLTGVWRYLKNAYARDEFTNTCPADQEIILAYAPVAK 218 (221)
T ss_pred HHhcCCCC--chhhhHHHHHHHHHHhHHHhhcCCchHHHHHHhhhhhhh
Confidence 43 44555 569999999999999999999999999998888776443
No 23
>PLN02907 glutamate-tRNA ligase
Probab=99.90 E-value=1.9e-22 Score=177.84 Aligned_cols=155 Identities=17% Similarity=0.170 Sum_probs=127.8
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEE-eCCeecchHHHHHHHHHhhCCCCCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV-HNGKPLAESLLIIEYIDEAWKQNPL 84 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~-~~~~~i~es~~I~~yL~~~~~~~~l 84 (222)
++||+.+.| .+.++.++|++.|++|+.+. .+|. |+||+|+ ++|..++||.||++||++.+++..|
T Consensus 3 ~kLy~~~~S-~~~~v~~~L~~lgv~~e~~~------------~~p~-GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~~L 68 (722)
T PLN02907 3 AKLSFPPDS-PPLAVIAAAKVAGVPLTIDP------------SLKS-GSAPTLLFSSGEKLTGTNVLLRYIARSASLPGF 68 (722)
T ss_pred EEEEECCCC-ChHHHHHHHHHcCCCcEEee------------cCCC-CCCcEEEECCCCEEECHHHHHHHHHHhCCCcCC
Confidence 789988766 56679999999999999875 2576 8999999 4888999999999999999988889
Q ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHH
Q 027498 85 LPDDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWG 163 (222)
Q Consensus 85 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~ 163 (222)
+|.++.+++++++|+.++..... .. +.+.++.||.+|++++|++|+++|+||+++++.+...
T Consensus 69 ~p~d~~erAqV~qWL~~~~~~~~-----------------~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~ 131 (722)
T PLN02907 69 YGQDAFESSQVDEWLDYAPTFSS-----------------GSEFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGS 131 (722)
T ss_pred CCCCHHHHHHHHHHHHHHhhccc-----------------HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhh
Confidence 99999999999999998754211 12 6677899999999999999999999999999987654
Q ss_pred HHHHHHhcccccCCCcccHHHHHHHHHhcchh
Q 027498 164 RIVEEIAGVSLIDAETMPLLTAWLNNFLEVPV 195 (222)
Q Consensus 164 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 195 (222)
.. ....... ...||+|.+|++++.++|+
T Consensus 132 ~~--~~~~~~~--~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 132 GQ--RWESLRK--SKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred hh--hhhcccc--cccCHHHHHHHHHHHhCCC
Confidence 11 0101111 3589999999999999999
No 24
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.83 E-value=2.3e-19 Score=137.49 Aligned_cols=180 Identities=19% Similarity=0.340 Sum_probs=129.5
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH--------
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID-------- 76 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~-------- 76 (222)
+++||.|..||+|.+||.+|.+.||+|+.++|++..+.+ +..+. +.+||+|..+|..+.||.+|+.-|+
T Consensus 90 ~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~r~e--Ik~Ss-ykKVPil~~~Geqm~dSsvIIs~laTyLq~~~q 166 (370)
T KOG3029|consen 90 DLVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVLRQE--IKWSS-YKKVPILLIRGEQMVDSSVIISLLATYLQDKRQ 166 (370)
T ss_pred eEEEEeeccCchHHHHHHHHhhcCCceEEEEecchhhhh--ccccc-cccccEEEeccceechhHHHHHHHHHHhccCCC
Confidence 689999999999999999999999999999999875443 33444 4899999987777999999988773
Q ss_pred ------hhCCCCCC------------------CCC-----CHHHHHHHHHHHHHHhcccchhhhhh-hcC----------
Q 027498 77 ------EAWKQNPL------------------LPD-----DPYERANARFWAKFFDEKCVPEVMGA-FAS---------- 116 (222)
Q Consensus 77 ------~~~~~~~l------------------~p~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------- 116 (222)
+.||.-+. +.+ +-+.+..-+.|-.|+++.+.+.+.+. |..
T Consensus 167 ~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFew 246 (370)
T KOG3029|consen 167 DLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFEW 246 (370)
T ss_pred CHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHHH
Confidence 34442111 111 11233345667778777766655431 110
Q ss_pred ----------CcH--------------------H-----HHHHHH-HHHHHHHHHHHh-cCCCcccCCCCChhHHHHHhH
Q 027498 117 ----------KGE--------------------E-----QEKAAK-ARENLKMLERAL-EGKPFFGGDKIGFLDIAVGWI 159 (222)
Q Consensus 117 ----------~~~--------------------~-----~~~~~~-~~~~l~~le~~L-~~~~~l~G~~~t~aD~~l~~~ 159 (222)
.+. . -...++ +.+.++.|-..| ..++|+.|++|++||++++++
T Consensus 247 f~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGv 326 (370)
T KOG3029|consen 247 FSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGV 326 (370)
T ss_pred HHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhh
Confidence 000 0 012356 888888888888 468999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCcccHHHHHHHHHhc
Q 027498 160 GIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLE 192 (222)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (222)
+..+.++... .+.+ +..++..|+.+|++
T Consensus 327 l~sm~gc~af--kd~~---q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 327 LRSMEGCQAF--KDCL---QNTSIGEWYYRMEA 354 (370)
T ss_pred hhHhhhhhHH--HHHH---hcchHHHHHHHHHH
Confidence 9999876543 2222 67899999999987
No 25
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.83 E-value=3.2e-20 Score=119.64 Aligned_cols=74 Identities=41% Similarity=0.712 Sum_probs=70.7
Q ss_pred EeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCCC
Q 027498 8 LLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN 82 (222)
Q Consensus 8 L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~~ 82 (222)
||+++.||||+|+|++|+++||+|+.+.++.....+++...||. |+||+|+++|..+.||.+|++||+++++++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~~~~~~~~~p~-~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPEEKRPEFLKLNPK-GKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTTSTSHHHHHHSTT-SBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCcccchhHHHhhccc-ccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 89999999999999999999999999999988878999999998 899999999999999999999999999865
No 26
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.79 E-value=4.6e-19 Score=113.60 Aligned_cols=73 Identities=32% Similarity=0.432 Sum_probs=68.7
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAW 79 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~ 79 (222)
|+||+.+.||+|++++++|+++|++|+.+.++.....+++++.||. |++|+++++|..+.||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPDNPPEDLAELNPY-GTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCCCCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 6899999999999999999999999999999988778899999998 899999999999999999999999864
No 27
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.79 E-value=6.1e-19 Score=113.35 Aligned_cols=74 Identities=77% Similarity=1.217 Sum_probs=68.1
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAW 79 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~ 79 (222)
|+||+++.||+|+++|++|+++|++|+.+.++...+.+++++.||..|++|+|+++|.+++||.+|++||++.+
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLGNKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcccCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 68999999999999999999999999999998877778899999943799999999999999999999999864
No 28
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.78 E-value=7.3e-19 Score=115.84 Aligned_cols=70 Identities=26% Similarity=0.343 Sum_probs=66.1
Q ss_pred cCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCCC
Q 027498 12 WASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN 82 (222)
Q Consensus 12 ~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~~ 82 (222)
..||||+|+|++|+++||+|+.+.+++.+++++|+++||. |+||+|+++|..++||.+|++||++.++.+
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~p~~~~~~nP~-g~vPvL~~~~~~i~eS~~I~eYLde~~~~~ 89 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMKRKPEDLKDLAPG-TQPPFLLYNGEVKTDNNKIEEFLEETLCPP 89 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCCCCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHHccCC
Confidence 4689999999999999999999999999889999999998 999999999999999999999999998754
No 29
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.78 E-value=8e-19 Score=112.28 Aligned_cols=70 Identities=27% Similarity=0.545 Sum_probs=64.7
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
++||+++.|++|+++|++|+++|++|+.+.++.. ...+++.++||. |+||+|+++|..+.||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~-g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPT-GEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 4799999999999999999999999999998764 456789999998 899999999999999999999985
No 30
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.77 E-value=8.3e-19 Score=112.37 Aligned_cols=72 Identities=14% Similarity=0.095 Sum_probs=66.2
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHh
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDE 77 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~ 77 (222)
+++||+++.|++|+++|++|.++|++|+.+.++.....+++.+.||. |++|+|+++|..+.||.+|++||++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 1 PYTLTYFPVRGRAEAIRLLLADQGISWEEERVTYEEWQESLKPKMLF-GQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred CcEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHHHhhhhhhccCCC-CCCCEEEECCEEEEcHHHHHHHHhc
Confidence 48999999999999999999999999999999865455678899998 8999999999999999999999986
No 31
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.76 E-value=2.5e-18 Score=111.28 Aligned_cols=73 Identities=22% Similarity=0.258 Sum_probs=65.4
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCC-CchhhhhhCCCCCcccEEEe--CCeecchHHHHHHHHHhhC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPN-KSPLLLRYNPVYKKIPVLVH--NGKPLAESLLIIEYIDEAW 79 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~vP~l~~--~~~~i~es~~I~~yL~~~~ 79 (222)
++||+++.||+|++++++|.++||+|+.+.++... ..+++.+.||. |+||+|++ +|..+.||.+|++||+++|
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~-~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGK-VQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCC-CcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 78999999999999999999999999999987543 35788999998 89999986 4689999999999999874
No 32
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.76 E-value=2.7e-18 Score=110.31 Aligned_cols=71 Identities=34% Similarity=0.393 Sum_probs=65.4
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHh
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDE 77 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~ 77 (222)
++||+++.||+|++++++|+++|++|+.+.++.. ...+++.+.||. |++|+|+++|..++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQ-HTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcC-CCCCEEEECCEEEEcHHHHHHHHhC
Confidence 6899999999999999999999999999999864 345889999998 8999999999999999999999974
No 33
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.76 E-value=3.1e-18 Score=109.13 Aligned_cols=69 Identities=36% Similarity=0.549 Sum_probs=64.4
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEe-CCeecchHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVH-NGKPLAESLLIIEYI 75 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~-~~~~i~es~~I~~yL 75 (222)
++||+++.||+|+|++++|+++|++|+.+.++.....+++++.||. |+||+|++ +|..+.||.+|++|+
T Consensus 1 ~~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~~~~~~~~~np~-~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 1 PILYSFRRCPYAMRARMALLLAGITVELREVELKNKPAEMLAASPK-GTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred CEEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCCCCCHHHHHHCCC-CCCCEEEECCCcEEecHHHHHHhh
Confidence 3799999999999999999999999999999988777899999998 89999997 489999999999997
No 34
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.76 E-value=2.4e-17 Score=116.78 Aligned_cols=122 Identities=52% Similarity=0.884 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHH
Q 027498 90 YERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEE 168 (222)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~ 168 (222)
.+++++++|+.+.++.+.+.+...+...++..+...+ +.+.++.||+.|++++|++|+++|+|||++++.+.++.....
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~ 81 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAAKGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEE 81 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 4789999999999888887776666554455556677 999999999999988999999999999999999988855433
Q ss_pred HhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHHHHhh
Q 027498 169 IAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNK 211 (222)
Q Consensus 169 ~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 211 (222)
..+.+.+..+.+|++.+|++++.++|++++++...+...+.++
T Consensus 82 ~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~ 124 (126)
T cd03185 82 VGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRDKLVEFAK 124 (126)
T ss_pred HcCccccCcccCchHHHHHHHHHhccHHHHhCCCHHHHHHHHH
Confidence 3233322245799999999999999999999999877766544
No 35
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.75 E-value=6.8e-18 Score=109.01 Aligned_cols=72 Identities=40% Similarity=0.489 Sum_probs=66.2
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhh
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEA 78 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~ 78 (222)
++||+++.||+|+++|++|+++|++|+.+.++.. ...+++.+.||. |++|+|+++|..+.||.+|++||+++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~-~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPF-GQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 7999999999999999999999999999988764 446789999998 89999999999999999999999863
No 36
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.75 E-value=9e-18 Score=108.45 Aligned_cols=73 Identities=29% Similarity=0.387 Sum_probs=66.4
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCC---CchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPN---KSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAW 79 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~ 79 (222)
++||+++.|++|++++++|+++|++|+.+.++... ..+++.+.||. |++|+|+++|.++.||.+|++||+++|
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPF-GKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcC-CCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 58999999999999999999999999999988652 34688999998 999999999999999999999999864
No 37
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.74 E-value=1.1e-17 Score=107.10 Aligned_cols=70 Identities=37% Similarity=0.610 Sum_probs=64.5
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
++||+++.||+|++++++|.++|++|+.+.++.. ...+++.+.||. |++|+|+++|..+.||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPN-GEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999998764 356889999998 899999999999999999999984
No 38
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.73 E-value=6.3e-18 Score=108.01 Aligned_cols=71 Identities=27% Similarity=0.294 Sum_probs=63.7
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCC-CchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHh
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPN-KSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDE 77 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~ 77 (222)
++||+++.|++|+++|++|+++|++|+.+.++... ...++.+.||. |++|+|+++|..+.||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~p~-~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTLPF-GQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCCcC-CCCCEEEECCEEEEecHHHHHHhhC
Confidence 58999999999999999999999999999988652 23447889998 8999999999999999999999974
No 39
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.73 E-value=1.4e-17 Score=106.08 Aligned_cols=70 Identities=30% Similarity=0.450 Sum_probs=61.1
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeC-CeecchHHHHHHHHHh
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYIDE 77 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~-~~~i~es~~I~~yL~~ 77 (222)
|+||+++.||+|+|+|++|.++|++|+.+.++... .......+|. +++|+|+++ |..+.||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~-~~~~~~~~~~-~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD-EATPIRMIGA-KQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc-hHHHHHhcCC-CccCEEEeCCCeEeehHHHHHHHHhC
Confidence 68999999999999999999999999999987543 2344578897 899999975 8899999999999974
No 40
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.73 E-value=1.6e-17 Score=106.44 Aligned_cols=70 Identities=39% Similarity=0.472 Sum_probs=65.0
Q ss_pred eEEeeccCCchHHHHHHHHHH--hCCCceEEeCCCCCCchhhhhhCCCCCcccEEE-eCCeecchHHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKL--KGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV-HNGKPLAESLLIIEYID 76 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~--~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~-~~~~~i~es~~I~~yL~ 76 (222)
++||+++.||+|+++|++|++ +|++|+.+.++.....+++.+.||. |++|+|+ ++|..+.||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPWSDDESLLAVNPL-GKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcccCChHHHHhCCC-CCCCEEEECCCCEEECHHHHHhhhC
Confidence 589999999999999999999 8999999999877778899999998 8999998 47899999999999985
No 41
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.72 E-value=2.8e-17 Score=109.32 Aligned_cols=71 Identities=35% Similarity=0.551 Sum_probs=65.9
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeC-CeecchHHHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYID 76 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~-~~~i~es~~I~~yL~ 76 (222)
.++||+++.||+|++++++|+++|++|+.+.++.....+++.+.||. +++|+|+++ |..+.||.+|++||+
T Consensus 18 ~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~~~~~~~~~np~-~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 18 IIRLYSMRFCPYAQRARLVLAAKNIPHEVININLKDKPDWFLEKNPQ-GKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred cEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCCCCcHHHHhhCCC-CCcCEEEECCCCEEECHHHHHHhhC
Confidence 59999999999999999999999999999999877666779999998 899999976 899999999999985
No 42
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.72 E-value=2.5e-17 Score=106.08 Aligned_cols=70 Identities=31% Similarity=0.416 Sum_probs=64.9
Q ss_pred EEeeccCCchHHHHHHHHHHhCCCceEEeCCCC--CCchhhhhhCCCCCcccEEEe-CCeecchHHHHHHHHHh
Q 027498 7 KLLGYWASPFALRVKWALKLKGVHYEYVEENLP--NKSPLLLRYNPVYKKIPVLVH-NGKPLAESLLIIEYIDE 77 (222)
Q Consensus 7 ~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~--~~~~~~~~~~p~~~~vP~l~~-~~~~i~es~~I~~yL~~ 77 (222)
+||+++.||+|+++|++|+++|++|+.+.++.. ...++++++||. |++|+|++ +|..+.||.+|++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~-~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPL-GKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCC-CCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 799999999999999999999999999999875 467889999998 99999996 58899999999999986
No 43
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.72 E-value=3.4e-17 Score=107.04 Aligned_cols=73 Identities=27% Similarity=0.438 Sum_probs=66.2
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeC---CeecchHHHHHHHHHhhC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHN---GKPLAESLLIIEYIDEAW 79 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~---~~~i~es~~I~~yL~~~~ 79 (222)
++||+++. |+|+++|++|.++|++|+.+.++.. ...+++.+.||. |+||+|+++ |..+.||.+|++||++.+
T Consensus 2 ~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~ 79 (81)
T cd03048 2 ITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPN-GRIPAIVDHNGTPLTVFESGAILLYLAEKY 79 (81)
T ss_pred eEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcC-CCCCEEEeCCCCceEEEcHHHHHHHHHHHh
Confidence 78999885 9999999999999999999998854 456889999998 899999986 789999999999999987
Q ss_pred C
Q 027498 80 K 80 (222)
Q Consensus 80 ~ 80 (222)
+
T Consensus 80 ~ 80 (81)
T cd03048 80 D 80 (81)
T ss_pred C
Confidence 5
No 44
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.72 E-value=2.7e-17 Score=105.32 Aligned_cols=70 Identities=29% Similarity=0.428 Sum_probs=63.9
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
++||+++.|++++++|++|+++|++|+.+.++.. ...+++.+.||. |++|+|+++|..+.||.+|++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~-~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPN-GRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCC-CCCCEEEECCEEEECHHHHHHHhC
Confidence 5899999999999999999999999999988753 346789999998 899999999999999999999984
No 45
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.71 E-value=2.6e-17 Score=105.56 Aligned_cols=70 Identities=33% Similarity=0.514 Sum_probs=63.3
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEE-eCCeecchHHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLV-HNGKPLAESLLIIEYID 76 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~-~~~~~i~es~~I~~yL~ 76 (222)
|+||+++.||+|+++|++|.++|++|+.+.++.. ...+++.+.||. |++|+|+ ++|..+.||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPA-GTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCC-CCCCEEEeCCCCEEecHHHHHHHhC
Confidence 5899999999999999999999999999998764 346789999998 8999998 47789999999999985
No 46
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.71 E-value=5.6e-17 Score=104.68 Aligned_cols=73 Identities=33% Similarity=0.486 Sum_probs=65.9
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWK 80 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~ 80 (222)
++||+++. ++++++|++|+++|++|+.+.++.. ...+++.+.||. +++|+|+++|..+.||.+|++||++.++
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPL-GKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCC-CCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 58998875 6899999999999999999998864 557889999998 8999999999999999999999999874
No 47
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.70 E-value=5.7e-17 Score=103.79 Aligned_cols=70 Identities=46% Similarity=0.686 Sum_probs=64.5
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
|+||+++.|++|+++|++|+++|++|+.+.++.. ...+++.+.||. |++|+|+++|..+.||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQ-GLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999998864 456889999998 899999999999999999999985
No 48
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.70 E-value=7.9e-17 Score=104.28 Aligned_cols=73 Identities=30% Similarity=0.416 Sum_probs=65.1
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeC-CeecchHHHHHHHHHhhCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYIDEAWK 80 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~-~~~i~es~~I~~yL~~~~~ 80 (222)
|+||+++.+ +++++|++|.++|++|+.+.++.. ...+++.+.||. |++|+|+++ |..+.||.+|++||++.+|
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~-~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPK-GQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCC-CCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 589999865 689999999999999999988865 347889999998 899999976 8899999999999999875
No 49
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.70 E-value=2e-16 Score=120.83 Aligned_cols=176 Identities=22% Similarity=0.220 Sum_probs=127.6
Q ss_pred eEEeecc-------CCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhh
Q 027498 6 VKLLGYW-------ASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEA 78 (222)
Q Consensus 6 ~~L~~~~-------~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~ 78 (222)
+-||.|+ .||||.++..+|+..+||||.+...+.. .++. |++|.++-||..++||..|..+|.+.
T Consensus 46 VYLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~~~~~~~~-------rSr~-G~lPFIELNGe~iaDS~~I~~~L~~h 117 (281)
T KOG4244|consen 46 VYLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEIVDCSLKR-------RSRN-GTLPFIELNGEHIADSDLIEDRLRKH 117 (281)
T ss_pred EEEEeccccCCCCCCChHHHHHHHHHHHhCCCceecccccee-------eccC-CCcceEEeCCeeccccHHHHHHHHHH
Confidence 4467665 5899999999999999999999887532 2333 89999999999999999999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhcccchhhh----------------------------hhh-----cC---------
Q 027498 79 WKQNPLLPDDPYERANARFWAKFFDEKCVPEVM----------------------------GAF-----AS--------- 116 (222)
Q Consensus 79 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~-----~~--------- 116 (222)
+.-+.. .++++++..+.+.+.++..+.-... +.+ ..
T Consensus 118 f~~~~~--L~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~ 195 (281)
T KOG4244|consen 118 FKIPDD--LSAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGA 195 (281)
T ss_pred cCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 863322 3466788877766666544322211 011 00
Q ss_pred -CcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhc
Q 027498 117 -KGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLE 192 (222)
Q Consensus 117 -~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (222)
.+-..++..+ +.+-+..++..|++.+|++|+++|-+|+.+++.|..+...-...-.+++ .+++|+|.+|++|+.+
T Consensus 196 IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~YP~~~~i~d~l-e~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 196 IGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYYPFRSHISDLL-EGDFPNLLEYCERIRK 272 (281)
T ss_pred ccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheeccCCCcHHHHH-hhhchHHHHHHHHHHH
Confidence 0112233456 8888999999999999999999999999999988776431011112334 5789999999999987
No 50
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.70 E-value=1.1e-16 Score=104.05 Aligned_cols=72 Identities=18% Similarity=0.282 Sum_probs=62.1
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhC-----CCCCcccEEEeCCeecchHHHHHHHHHhhC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYN-----PVYKKIPVLVHNGKPLAESLLIIEYIDEAW 79 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~-----p~~~~vP~l~~~~~~i~es~~I~~yL~~~~ 79 (222)
+++||+++.|+.|+++||+|+++|++|+.+.++.. +++.+.+ |. |+||+|++||..++||.||++||++++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~---~~~~~~~~~~~~~~-g~vP~L~~~g~~l~ES~AI~~YL~~~~ 76 (79)
T cd03077 1 KPVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA---EDLEKLKKDGSLMF-QQVPMVEIDGMKLVQTRAILNYIAGKY 76 (79)
T ss_pred CCEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH---HHHHhhccccCCCC-CCCCEEEECCEEEeeHHHHHHHHHHHc
Confidence 47999999999999999999999999999988742 2333333 56 899999999999999999999999987
Q ss_pred C
Q 027498 80 K 80 (222)
Q Consensus 80 ~ 80 (222)
+
T Consensus 77 ~ 77 (79)
T cd03077 77 N 77 (79)
T ss_pred C
Confidence 6
No 51
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.69 E-value=9.8e-17 Score=103.83 Aligned_cols=72 Identities=29% Similarity=0.514 Sum_probs=62.2
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeC----CeecchHHHHHHHHHhhC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHN----GKPLAESLLIIEYIDEAW 79 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~----~~~i~es~~I~~yL~~~~ 79 (222)
+++||+++.||+|+++|++|.++||+|+.+.++.... .+ ...+|. ++||+|+++ |.++.||.+|++||++..
T Consensus 1 ~i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~~~-~~-~~~~~~-~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 1 KITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPVSR-KE-IKWSSY-KKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCceEEEECCchhH-HH-HHHhCC-CccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 5899999999999999999999999999999875432 23 356897 899999954 789999999999999864
No 52
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.69 E-value=4.3e-16 Score=110.16 Aligned_cols=119 Identities=23% Similarity=0.333 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcC--CCcccCCCCChhHHHHHhHHHHHHHHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEG--KPFFGGDKIGFLDIAVGWIGIWGRIVE 167 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~--~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (222)
+|++.+.|..+++.. ...+...+.. ++..+...+ +.+.++.||+.|++ ++|++|+++|+||+++++.+.++....
T Consensus 2 ~ra~~r~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~ 79 (124)
T cd03184 2 EKAQQKLLLERFSKV-VSAFYKLLGA-PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALK 79 (124)
T ss_pred hHHHHHHHHHHHhhh-hHHHHHHHhc-cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHH
Confidence 589999999999744 4444444444 556667777 99999999999975 799999999999999999988875443
Q ss_pred HHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHHHHhhh
Q 027498 168 EIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNKG 212 (222)
Q Consensus 168 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 212 (222)
...+ .....+.+|++++|++++.++|++++++.+.+...+.++.
T Consensus 80 ~~~~-~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 80 LLLG-YEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTEIHAEFLKS 123 (124)
T ss_pred hhcc-ccCCcccChHHHHHHHHhccChHHHHHhCCHHHHHHHHhc
Confidence 2212 1122458999999999999999999999999988887764
No 53
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.69 E-value=5e-16 Score=112.34 Aligned_cols=126 Identities=18% Similarity=0.091 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHhcccchhhhhhh-cCCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHH
Q 027498 90 YERANARFWAKFFDEKCVPEVMGAF-ASKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVE 167 (222)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (222)
+.++.+++|+++..+.+.+.+...+ ..+++..+...+ +.+.++.||+.|++++|++|+++|+||+++++.+.++....
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~ 82 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVY 82 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHh
Confidence 4688899999999998888766654 344555566677 99999999999998999999999999999999987663221
Q ss_pred -HHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHHHHhhhhhh
Q 027498 168 -EIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNKGFHK 215 (222)
Q Consensus 168 -~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 215 (222)
............||+|.+|++++.++|++++++...+...+.++++++
T Consensus 83 ~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 83 VQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred hhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHHHHHHHHHhhcCC
Confidence 111101111248999999999999999999999988888888888754
No 54
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.68 E-value=1.3e-16 Score=104.36 Aligned_cols=73 Identities=19% Similarity=0.209 Sum_probs=61.7
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCC----Cchhhhh-----hCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPN----KSPLLLR-----YNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~----~~~~~~~-----~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
.+|||+..++.|+++|++|+++|++|+.+.++... ..+++.. .+|. |+||+|+++|..++||.||++||+
T Consensus 1 ~~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~-g~vP~L~~~g~~l~ES~AIl~YLa 79 (82)
T cd03075 1 PTLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDF-PNLPYYIDGDVKLTQSNAILRYIA 79 (82)
T ss_pred CEEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcC-CCCCEEEECCEEEeehHHHHHHHh
Confidence 47999999999999999999999999999998653 1233432 2287 899999999999999999999999
Q ss_pred hhC
Q 027498 77 EAW 79 (222)
Q Consensus 77 ~~~ 79 (222)
+++
T Consensus 80 ~~~ 82 (82)
T cd03075 80 RKH 82 (82)
T ss_pred hcC
Confidence 864
No 55
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.68 E-value=5.4e-16 Score=106.76 Aligned_cols=104 Identities=21% Similarity=0.276 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHH
Q 027498 90 YERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEE 168 (222)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~ 168 (222)
.+|++++.|+.++++.+.+.+...+...++..+...+ +.+.+..||+.|++++|++|+++|+|||++++.+.++..
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~--- 78 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPA--- 78 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHH---
Confidence 5799999999999988887766655544555666677 999999999999999999999999999999998765531
Q ss_pred HhcccccCCCcccHHHHHHHHHhcchhhhhc
Q 027498 169 IAGVSLIDAETMPLLTAWLNNFLEVPVIKAC 199 (222)
Q Consensus 169 ~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 199 (222)
.+.++. ..+|++++|++++.+||++++.
T Consensus 79 -~~~~~~--~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 79 -LGIELP--KQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred -cCCCCc--ccchHHHHHHHHHHCCHHHHHh
Confidence 243332 3799999999999999999875
No 56
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.66 E-value=4.2e-16 Score=100.29 Aligned_cols=67 Identities=33% Similarity=0.576 Sum_probs=60.5
Q ss_pred eEEeecc-------CCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhh
Q 027498 6 VKLLGYW-------ASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEA 78 (222)
Q Consensus 6 ~~L~~~~-------~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~ 78 (222)
++||+++ .||+|++++++|+++|++|+.+.++.. +.+|. |++|+|+++|..+.||.+|++||+++
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~~-------~~~p~-g~vPvl~~~g~~l~eS~~I~~yL~~~ 73 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGLA-------KRSPK-GKLPFIELNGEKIADSELIIDHLEEK 73 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCcc-------cCCCC-CCCCEEEECCEEEcCHHHHHHHHHHH
Confidence 5899988 689999999999999999999988642 57897 89999999999999999999999998
Q ss_pred CC
Q 027498 79 WK 80 (222)
Q Consensus 79 ~~ 80 (222)
|+
T Consensus 74 ~~ 75 (75)
T cd03080 74 YG 75 (75)
T ss_pred cC
Confidence 64
No 57
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.66 E-value=4.4e-16 Score=100.37 Aligned_cols=72 Identities=35% Similarity=0.514 Sum_probs=61.0
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC---CCchhhhhhCCCCCcccEEEeC-CeecchHHHHHHHHHh
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP---NKSPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYIDE 77 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~-~~~i~es~~I~~yL~~ 77 (222)
|+|++|+..++++++|++|+++|++|+.+.++.. .+.+++.+.||..|++|+|+++ |..++||.||++||++
T Consensus 1 ~~l~l~~~~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 1 MTLTLYNGRGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEEESSSTTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CEEEEECCCCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 4666677777999999999999999999999864 3348999999963799999998 9999999999999985
No 58
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.66 E-value=1.9e-15 Score=108.65 Aligned_cols=177 Identities=23% Similarity=0.319 Sum_probs=118.2
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEE-eCCeecchHHHHHHHHHhhCCCCCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV-HNGKPLAESLLIIEYIDEAWKQNPL 84 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~-~~~~~i~es~~I~~yL~~~~~~~~l 84 (222)
|+||-+.+||||-|+||++-.+|||++.+...-.+.... ..+-.. .+||+|+ ++|..+.||..|++|+++..+.+-+
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe~Tp-~rmiG~-KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~~l 78 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDEETP-IRMIGQ-KQVPILQKEDGRAMPESLDIVHYVDELDGKPLL 78 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccCcccCh-hhhhcc-cccceEEccccccchhhhHHHHHHHHhcCchhh
Confidence 689999999999999999999999999998864332211 223333 5899998 6889999999999999999875423
Q ss_pred CCCCHHHHHHHHHHHHHHhcc----cchhhhh-------------hhcCCcH-----------HHHHHHH-HHHHHHHHH
Q 027498 85 LPDDPYERANARFWAKFFDEK----CVPEVMG-------------AFASKGE-----------EQEKAAK-ARENLKMLE 135 (222)
Q Consensus 85 ~p~~~~~~~~~~~~~~~~~~~----~~~~~~~-------------~~~~~~~-----------~~~~~~~-~~~~l~~le 135 (222)
-+. .+-.++.|++.+... +.+.+.+ .|....+ .-..... +..-++.++
T Consensus 79 t~~---~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~ 155 (215)
T COG2999 79 TGK---VRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRALD 155 (215)
T ss_pred ccC---cCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHH
Confidence 321 233344455444433 3332221 2211111 1123345 777888888
Q ss_pred HHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCccc-HHHHHHHHHhcchhhh
Q 027498 136 RALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMP-LLTAWLNNFLEVPVIK 197 (222)
Q Consensus 136 ~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~~ 197 (222)
..+.+.+=+ ....++-|+.+||+|..+-.. .+. ++| ++..|+.+|.+...+.
T Consensus 156 ~Li~~~s~~-n~~l~~ddi~vFplLRnlt~v---~gi------~wps~v~dy~~~msektqV~ 208 (215)
T COG2999 156 KLIVGPSAV-NGELSEDDILVFPLLRNLTLV---AGI------QWPSRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHhcCcchh-ccccchhhhhhhHHhccceec---ccC------CCcHHHHHHHHHHHHhhCcc
Confidence 888765533 345999999999998876322 122 455 6999999999866554
No 59
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.66 E-value=3.4e-16 Score=99.26 Aligned_cols=65 Identities=48% Similarity=0.720 Sum_probs=56.1
Q ss_pred CCchHHHHHHHHHHhCCCceEEeCCC----CCCchhhhhhCCCCCcccEEEe-CCeecchHHHHHHHHHhh
Q 027498 13 ASPFALRVKWALKLKGVHYEYVEENL----PNKSPLLLRYNPVYKKIPVLVH-NGKPLAESLLIIEYIDEA 78 (222)
Q Consensus 13 ~s~~~~~vr~~L~~~gi~~~~~~~~~----~~~~~~~~~~~p~~~~vP~l~~-~~~~i~es~~I~~yL~~~ 78 (222)
+||||+|++++|+++|++|+...+.. ....+++.+.||. |+||+|++ +|.++.||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~-~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPR-GKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT--SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcC-eEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 59999999999999999999988733 2556899999998 89999997 789999999999999873
No 60
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.65 E-value=2.2e-15 Score=105.04 Aligned_cols=109 Identities=24% Similarity=0.203 Sum_probs=85.9
Q ss_pred CCHHHHHHHHHHHHHHhcccchhhhhhhc---CCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHH
Q 027498 87 DDPYERANARFWAKFFDEKCVPEVMGAFA---SKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIW 162 (222)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~ 162 (222)
.++.+++.+++|+.+.+..+.+.+..... ...+..+...+ +.+.++.||+.|++++|++|+++|+||+++++.+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~ 81 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQ 81 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHH
Confidence 36889999999999998888877666322 11123556667 999999999999988999999999999999998776
Q ss_pred HHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhc
Q 027498 163 GRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKAC 199 (222)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 199 (222)
+... ....+...+||+|++|++++.++|+++++
T Consensus 82 ~~~~----~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 82 FAHV----DPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHh----hhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 6432 11112235899999999999999999975
No 61
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.65 E-value=5.6e-16 Score=101.95 Aligned_cols=67 Identities=30% Similarity=0.493 Sum_probs=58.2
Q ss_pred cCCchHHHHHHHHHHhCCCceEEeCCCCCC---chhhhhhCCCCCcccEEEeC-CeecchHHHHHHHHHhhCC
Q 027498 12 WASPFALRVKWALKLKGVHYEYVEENLPNK---SPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYIDEAWK 80 (222)
Q Consensus 12 ~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~---~~~~~~~~p~~~~vP~l~~~-~~~i~es~~I~~yL~~~~~ 80 (222)
+.||+|+++|++|.++|++|+.+.++.... ..++ +.||. |++|+|+++ |..+.||.+|++||++++|
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~-~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGF-YTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCC-ceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 579999999999999999999999876532 2333 78998 899999988 8999999999999999875
No 62
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.63 E-value=3.2e-15 Score=103.89 Aligned_cols=103 Identities=25% Similarity=0.390 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHhcccchhhhhhhcCC---------cHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGAFASK---------GEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIG 160 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l 160 (222)
+|+.+++|+.+..+.+.+.+...+... +...+...+ +.+.++.||+.|++++|++|+++|+|||++++.+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~ 81 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVL 81 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHH
Confidence 578999999999888887765433221 222344556 9999999999999889999999999999999998
Q ss_pred HHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcC
Q 027498 161 IWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACI 200 (222)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 200 (222)
.++... +. +.+++|++.+|++++.++|++++++
T Consensus 82 ~~~~~~----~~---~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 82 RWAPGV----GL---DLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHhhc----CC---ChhhChHHHHHHHHHHhCHHhHhhC
Confidence 876321 22 1347999999999999999999864
No 63
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.61 E-value=3e-15 Score=94.45 Aligned_cols=70 Identities=43% Similarity=0.624 Sum_probs=62.8
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCch-hhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSP-LLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~-~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
++||+++.||+|++++++|+++|++|+.+.++...... ++...+|. +++|+|.++|..+.||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPL-GKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHhcCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 58999999999999999999999999999998664333 47888998 899999999999999999999984
No 64
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.61 E-value=3e-15 Score=95.75 Aligned_cols=66 Identities=32% Similarity=0.451 Sum_probs=59.6
Q ss_pred eccCCchHHHHHHHHHHhCCCceEEeCCCCC--CchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 10 GYWASPFALRVKWALKLKGVHYEYVEENLPN--KSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 10 ~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~--~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
+...|+++++++++|+++|++|+.+.++... ..+++.+.||. |++|+|+++|.++.||.+|++||+
T Consensus 6 ~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 6 NKNYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPT-GKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCC-CcCCEEEECCEEEEcHHHHHHHhC
Confidence 4567999999999999999999999988653 45889999998 999999999999999999999984
No 65
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.58 E-value=3e-14 Score=100.92 Aligned_cols=106 Identities=18% Similarity=0.166 Sum_probs=82.2
Q ss_pred cccchhhhhhhc-CCcHHHHHHHH-HHHHHHHHHHHhcC----------------CCcccCCCCChhHHHHHhHHHHHHH
Q 027498 104 EKCVPEVMGAFA-SKGEEQEKAAK-ARENLKMLERALEG----------------KPFFGGDKIGFLDIAVGWIGIWGRI 165 (222)
Q Consensus 104 ~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~le~~L~~----------------~~~l~G~~~t~aD~~l~~~l~~~~~ 165 (222)
..+++.+..++. .+++..+...+ +...|+.||.+|.+ ++|++|+++|+|||++++.+.++..
T Consensus 9 ~~~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~ 88 (134)
T cd03198 9 EDIFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKV 88 (134)
T ss_pred HHHHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 344555555444 34566677777 99999999999976 6799999999999999999887754
Q ss_pred HHHH-hcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHHHHhh
Q 027498 166 VEEI-AGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNK 211 (222)
Q Consensus 166 ~~~~-~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 211 (222)
+... .+..+ ...||+|.+|++++.+||+|+++++..+.+...++
T Consensus 89 ~~~~~~g~~i--~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~ 133 (134)
T cd03198 89 VAKKYRNFEI--PADLTGLWRYLKNAYQREEFTNTCPADQEIELAYK 133 (134)
T ss_pred HHHhhcCCCc--cccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhc
Confidence 3211 24333 35899999999999999999999999988876654
No 66
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.58 E-value=2.1e-14 Score=101.01 Aligned_cols=109 Identities=20% Similarity=0.256 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHhcccchhhhhhhcCC-cHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGAFASK-GEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEE 168 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~ 168 (222)
++++++++++.+.+.........+..+ +...+...+ +.+.+..||+.|++++|++|+++|+||+++++.+.++...
T Consensus 2 e~~~id~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~-- 79 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMGLARICYSPDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIF-- 79 (121)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh--
Confidence 467888888877776544433334332 223344556 9999999999999889999999999999999998887432
Q ss_pred HhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHH
Q 027498 169 IAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHE 205 (222)
Q Consensus 169 ~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 205 (222)
....+ +.||+|.+|++++.++|++++++++...
T Consensus 80 --~~~~~--~~~P~l~~~~~rv~~~p~vk~~~~~~~~ 112 (121)
T cd03209 80 --EPDCL--DAFPNLKDFLERFEALPKISAYMKSDRF 112 (121)
T ss_pred --Ccccc--ccChHHHHHHHHHHHCHHHHHHHhcccC
Confidence 22233 4899999999999999999999887654
No 67
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.57 E-value=3.4e-14 Score=99.78 Aligned_cols=113 Identities=23% Similarity=0.310 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHHHHhcccchhh-hhhhcCCcHHHHHHHH-HHHHHHHHHHHhc---CCCcccCCCCChhHHHHHhHHHH
Q 027498 88 DPYERANARFWAKFFDEKCVPEV-MGAFASKGEEQEKAAK-ARENLKMLERALE---GKPFFGGDKIGFLDIAVGWIGIW 162 (222)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~l~~le~~L~---~~~~l~G~~~t~aD~~l~~~l~~ 162 (222)
|+.+|+.+++++.+. ..+...+ ...+... ..+ +.+.++.||+.|+ +++|++| ++|+|||++++++.+
T Consensus 1 d~~~ra~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~ 72 (120)
T cd03203 1 DPAKREFADELLAYT-DAFTKALYSSLIKGD------PSAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIER 72 (120)
T ss_pred CHHHHHHHHHHHHHH-HHHHHHHHHHHhcCC------chHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHH
Confidence 467899999998882 2222222 2222211 122 5666777888876 4799999 999999999999987
Q ss_pred HHH-HHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHHHHHHh
Q 027498 163 GRI-VEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHN 210 (222)
Q Consensus 163 ~~~-~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 210 (222)
+.. ..+..+.++. +++|+|.+|+++|.++|+++++.++.+++.+.+
T Consensus 73 ~~~~~~~~~~~~~~--~~~P~l~~W~~~~~~rp~~~~~~~~~~~~~~~~ 119 (120)
T cd03203 73 FQIFLSELFNYDIT--EGRPNLAAWIEEMNKIEAYTQTKQDPQELLDLA 119 (120)
T ss_pred HHHHHHHhcCcccc--ccCcHHHHHHHHHhcchHHHhHcCCHHHHHhhh
Confidence 753 2223344442 489999999999999999999999988777644
No 68
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.57 E-value=1.8e-14 Score=101.35 Aligned_cols=106 Identities=22% Similarity=0.187 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHhcccchhhhh----hhc-C-C--cHH-HHHHHH-HHHHHHHHHHHhc--CCCcccCCCCChhHHHHH
Q 027498 90 YERANARFWAKFFDEKCVPEVMG----AFA-S-K--GEE-QEKAAK-ARENLKMLERALE--GKPFFGGDKIGFLDIAVG 157 (222)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~----~~~-~-~--~~~-~~~~~~-~~~~l~~le~~L~--~~~~l~G~~~t~aD~~l~ 157 (222)
.+++.+++|+.++++.+.+.+.. .+. . . ++. .+...+ +.+.++.||+.|+ +++|++|+++|+||++++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 81 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLV 81 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHH
Confidence 47899999999998877654221 111 1 1 122 233456 9999999999997 457999999999999999
Q ss_pred hHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCC
Q 027498 158 WIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPS 202 (222)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 202 (222)
+.+.++... +.+ ...+|+|++|++++.++|+++++.+.
T Consensus 82 ~~~~~~~~~----~~~---~~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 82 PQVYNARRF----GVD---LSPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHh----CCC---cccCcHHHHHHHHHHhChhHHHhCcC
Confidence 988776322 322 25899999999999999999998764
No 69
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.57 E-value=1.3e-14 Score=92.57 Aligned_cols=65 Identities=35% Similarity=0.543 Sum_probs=57.6
Q ss_pred eEEeecc-------CCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhh
Q 027498 6 VKLLGYW-------ASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEA 78 (222)
Q Consensus 6 ~~L~~~~-------~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~ 78 (222)
++||.++ .||+|++++++|+++|++|+.+.++... .+|. |++|+|+++|..+.||.+|++||+++
T Consensus 1 ~~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~~-------~~p~-g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 1 LELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNPW-------RSPT-GKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCcc-------cCCC-cccCEEEECCEEEcCHHHHHHHHhhC
Confidence 3677776 8999999999999999999999987432 7887 89999999999999999999999874
No 70
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.56 E-value=5.6e-14 Score=98.71 Aligned_cols=102 Identities=16% Similarity=0.251 Sum_probs=76.5
Q ss_pred chhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcC-CCcccCCCCChhHHHHHhHHHHHHHH-HHHhcccccCCCcccHH
Q 027498 107 VPEVMGAFASKGEEQEKAAK-ARENLKMLERALEG-KPFFGGDKIGFLDIAVGWIGIWGRIV-EEIAGVSLIDAETMPLL 183 (222)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~-~~~l~G~~~t~aD~~l~~~l~~~~~~-~~~~~~~~~~~~~~p~l 183 (222)
.+.....+...++. +...+ +.+.++.||..|.+ ++|++|+++|+||+++++.+.++... ....+... .+.+|+|
T Consensus 15 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~--~~~~P~l 91 (121)
T cd03201 15 FSTFVGFLKSKDSN-DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSV--PESLTSV 91 (121)
T ss_pred HHHHHHHHHCCcHH-HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCC--cccchHH
Confidence 33444444433333 44556 99999999999984 79999999999999999988777532 21112222 3589999
Q ss_pred HHHHHHHhcchhhhhcCCChHHHHHHhh
Q 027498 184 TAWLNNFLEVPVIKACIPSWHELLEHNK 211 (222)
Q Consensus 184 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 211 (222)
.+|++++.+||+|+++++..+++.+.++
T Consensus 92 ~~w~~rl~~rps~~~t~~~~~~~~~~~~ 119 (121)
T cd03201 92 KSYMKALFSRESFVKTKAEKEDVIAGWA 119 (121)
T ss_pred HHHHHHHHCCchhhhcCCCHHHHHHHhc
Confidence 9999999999999999999888777654
No 71
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.56 E-value=2.4e-14 Score=99.39 Aligned_cols=104 Identities=21% Similarity=0.314 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHhcccchhhhhh-----hc--CCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGA-----FA--SKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIW 162 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~ 162 (222)
+++.+++|+.+.+..+.+.+... +. .++...+...+ +.+.++.+|+.|++++|++|+++|+|||++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~ 80 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRR 80 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHH
Confidence 36888999999888777654332 11 22344555667 999999999999988999999999999999998888
Q ss_pred HHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcC
Q 027498 163 GRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACI 200 (222)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 200 (222)
.... +... ...+|++.+|++++.++|++++++
T Consensus 81 ~~~~----~~~~--~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 81 LEWI----GIDD--LDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHhc----cccc--hhhchHHHHHHHHHhhCHHHHHhc
Confidence 7433 2222 347999999999999999999864
No 72
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.55 E-value=3.3e-14 Score=100.74 Aligned_cols=108 Identities=23% Similarity=0.239 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcC---CCcccCCCCChhHHHHHhHHHHHHHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEG---KPFFGGDKIGFLDIAVGWIGIWGRIV 166 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~---~~~l~G~~~t~aD~~l~~~l~~~~~~ 166 (222)
+++.+++++..+.+.........+...+...+...+ +.+.+..||+.|++ ++|++|+++|+||+++++.+.++...
T Consensus 3 e~~~vd~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~ 82 (126)
T cd03210 3 EAALIDMVNDGVEDLRLKYVRMIYQNYEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL 82 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh
Confidence 577788877776665444433333333344555666 99999999999974 58999999999999999998887532
Q ss_pred HHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChH
Q 027498 167 EEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWH 204 (222)
Q Consensus 167 ~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (222)
....+ ..+|+|.+|++++.++|++++++....
T Consensus 83 ----~~~~~--~~~P~l~~~~~rv~~~p~v~~~~~~~~ 114 (126)
T cd03210 83 ----APGCL--DAFPLLKAFVERLSARPKLKAYLESDA 114 (126)
T ss_pred ----ChHhh--hcChHHHHHHHHHHhCcHHHHHHhCcC
Confidence 22222 489999999999999999999887654
No 73
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.55 E-value=7.6e-14 Score=97.45 Aligned_cols=103 Identities=24% Similarity=0.399 Sum_probs=81.1
Q ss_pred CHHHHHHHHHHHHHHhcccchhhhhhhc-------------CCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhH
Q 027498 88 DPYERANARFWAKFFDEKCVPEVMGAFA-------------SKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLD 153 (222)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD 153 (222)
++.+++.+++|+.+++..+.+.+...+. .+++..++..+ +.+.++.||+.|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 4678999999999988877665544321 11333455667 999999999999988999999999999
Q ss_pred HHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhh
Q 027498 154 IAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVI 196 (222)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (222)
|++++.+.++... +.++ ..++|+|.+|++++.++|++
T Consensus 81 i~l~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVV----KLRV--PEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhc----CCCC--ccccHHHHHHHHHHHhccCC
Confidence 9999999887432 4333 34899999999999999974
No 74
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=1.1e-13 Score=106.32 Aligned_cols=201 Identities=22% Similarity=0.218 Sum_probs=140.1
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCc--eEEeCCC--CCCchh----------------------hhhhCCCC---Ccc
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHY--EYVEENL--PNKSPL----------------------LLRYNPVY---KKI 55 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~--~~~~~~~--~~~~~~----------------------~~~~~p~~---~~v 55 (222)
.+.||..-.|||+.|..++=+.+|+.= ....+++ ..+.-. +..-.|.| -+|
T Consensus 51 RYhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTV 130 (324)
T COG0435 51 RYHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTV 130 (324)
T ss_pred eEEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeE
Confidence 689999999999999999999999762 1111111 111111 11112311 179
Q ss_pred cEEEeCC---eecchHHHHHHHHHhhCC-----CCCCCCCCHHHHHHHHHHHHHHhcccchhhhh-hhcCCcHHHHHHHH
Q 027498 56 PVLVHNG---KPLAESLLIIEYIDEAWK-----QNPLLPDDPYERANARFWAKFFDEKCVPEVMG-AFASKGEEQEKAAK 126 (222)
Q Consensus 56 P~l~~~~---~~i~es~~I~~yL~~~~~-----~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 126 (222)
|+|-+.. .+-.||..|++-+...+. ...++|. ..|.+++.+.+++.+.+..-+.+ -|-...+.-++.-+
T Consensus 131 PVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~--~Lr~eId~~n~~Iy~~vNNGVYk~GFA~tq~aYeea~~ 208 (324)
T COG0435 131 PVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPE--ALRTEIDELNKWIYDTVNNGVYKAGFATTQEAYEEAVK 208 (324)
T ss_pred EEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCH--HHHHHHHHHHhhhcccccCceeeecccchHHHHHHHHH
Confidence 9998732 334899999999876542 2358884 47999999999988776655443 34344555566666
Q ss_pred -HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHH-HHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChH
Q 027498 127 -ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRI-VEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWH 204 (222)
Q Consensus 127 -~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~-~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (222)
+-+.|+.||..|+++.|++|+++|-||+-+++.|.++.. ...++....-.-.+||+|..|...+-+.|.|..+.. .+
T Consensus 209 ~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~d-f~ 287 (324)
T COG0435 209 KLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETVD-FD 287 (324)
T ss_pred HHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCcccccccc-hh
Confidence 899999999999999999999999999999999887732 222222222112369999999999999999999864 34
Q ss_pred HHHH
Q 027498 205 ELLE 208 (222)
Q Consensus 205 ~~~~ 208 (222)
+++.
T Consensus 288 hIK~ 291 (324)
T COG0435 288 HIKL 291 (324)
T ss_pred Hhhh
Confidence 4433
No 75
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.54 E-value=6.9e-14 Score=100.44 Aligned_cols=108 Identities=22% Similarity=0.274 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHhcccchhhhhhhcCCcHHH---HHHH-H-HHHHHHHHHHHhc--CCCcccCCCCChhHHHHHhHHHHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGAFASKGEEQ---EKAA-K-ARENLKMLERALE--GKPFFGGDKIGFLDIAVGWIGIWG 163 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~-~~~~l~~le~~L~--~~~~l~G~~~t~aD~~l~~~l~~~ 163 (222)
+.+.++++++.+.+.+...+...+...++.. +... + +.+.++.||+.|+ +++|++|+++|+||+++++.+.++
T Consensus 3 e~a~iD~i~~~v~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~ 82 (137)
T cd03208 3 ERALIDMYVEGTADLMEMILMLPFLPPEEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMV 82 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHH
Confidence 5788889888887776665544443332222 2233 2 6899999999998 678999999999999999999887
Q ss_pred HHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChH
Q 027498 164 RIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWH 204 (222)
Q Consensus 164 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 204 (222)
... ....+ ..||+|++|++++.++|++++++....
T Consensus 83 ~~~----~~~~l--~~~P~l~~~~~rv~~~P~vk~~~~~~~ 117 (137)
T cd03208 83 EEL----DPSLL--SDFPLLQAFKTRISNLPTIKKFLQPGS 117 (137)
T ss_pred HHh----chhhh--ccChHHHHHHHHHHcCHHHHHHHhcCC
Confidence 432 22223 389999999999999999999987643
No 76
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.53 E-value=9.3e-14 Score=97.34 Aligned_cols=102 Identities=25% Similarity=0.330 Sum_probs=78.9
Q ss_pred CCCHHHHHHHHHHHHHHhcccchhhhhh-h----cC----------CcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCC
Q 027498 86 PDDPYERANARFWAKFFDEKCVPEVMGA-F----AS----------KGEEQEKAAK-ARENLKMLERALEGKPFFGGDKI 149 (222)
Q Consensus 86 p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~----------~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~ 149 (222)
|.++.+++++++|+.+....+.+.+... + .. ++...+...+ +.+.++.||+.|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 5688899999999999988877765421 1 11 1122233455 99999999999999999999999
Q ss_pred ChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcch
Q 027498 150 GFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVP 194 (222)
Q Consensus 150 t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 194 (222)
|+||+++++.+.++... +. ....+|++.+|+++++++|
T Consensus 82 t~ADi~l~~~~~~~~~~----~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALAR----GP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHc----Cc---ccccCchHHHHHHHHhcCC
Confidence 99999999988877432 22 1348999999999999986
No 77
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.53 E-value=9.2e-14 Score=97.11 Aligned_cols=105 Identities=17% Similarity=0.273 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHhcccchhhhh-----hhc------CCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHh
Q 027498 91 ERANARFWAKFFDEKCVPEVMG-----AFA------SKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGW 158 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~-----~~~------~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~ 158 (222)
+|+++.+|+.+....+.+.+.. .+. .+++..+...+ +.+.++.||+.|++++|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 5778888888877766555432 111 12333455566 99999999999998899999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcC
Q 027498 159 IGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACI 200 (222)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 200 (222)
++.+.... +.... .+.+|++++|++++.++|++++++
T Consensus 82 ~~~~~~~~----~~~~~-~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 82 YLQYLMAT----PFAKL-FDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHc----cchhh-hhcCchHHHHHHHHHhCHHHHhhC
Confidence 88777421 11111 247999999999999999998764
No 78
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.52 E-value=3.8e-13 Score=99.08 Aligned_cols=169 Identities=14% Similarity=0.150 Sum_probs=130.6
Q ss_pred CCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCCCCCCC-CCCHHH
Q 027498 13 ASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLL-PDDPYE 91 (222)
Q Consensus 13 ~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~~~~l~-p~~~~~ 91 (222)
...-|..|..+|+.+++||..+..+ +.+| ++|. |+||.|..|...++|-.+|+.+.+++.- .+- ..+..+
T Consensus 33 d~ascLAVqtfLrMcnLPf~v~~~~----Naef--mSP~-G~vPllr~g~~~~aef~pIV~fVeak~~--~l~s~lsE~q 103 (257)
T KOG3027|consen 33 DNASCLAVQTFLRMCNLPFNVRQRA----NAEF--MSPG-GKVPLLRIGKTLFAEFEPIVDFVEAKGV--TLTSWLSEDQ 103 (257)
T ss_pred cchhHHHHHHHHHHcCCCceeeecC----Cccc--cCCC-CCCceeeecchhhhhhhHHHHHHHHhcc--chhhhhhhHH
Confidence 3456999999999999999998775 5555 6786 8999999999999999999999998742 232 346779
Q ss_pred HHHHHHHHHHHhcccchhhh------------------------------------------hhhcCCcHHHHHHHH-HH
Q 027498 92 RANARFWAKFFDEKCVPEVM------------------------------------------GAFASKGEEQEKAAK-AR 128 (222)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~~~-~~ 128 (222)
++.++..++.+++.+..+-. +.+..++...+.+.+ +.
T Consensus 104 kadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vd 183 (257)
T KOG3027|consen 104 KADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVD 183 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHH
Confidence 99999988887765443211 022345666777888 99
Q ss_pred HHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHH-hc-ccccCCCcccHHHHHHHHHhc
Q 027498 129 ENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEI-AG-VSLIDAETMPLLTAWLNNFLE 192 (222)
Q Consensus 129 ~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~-~~-~~~~~~~~~p~l~~~~~~~~~ 192 (222)
..++.|+..|+..+|+.|++||-+|..+++.+..+....-- .. ... ..+|++|-++++|+.+
T Consensus 184 kc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~--lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 184 KCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANI--LKKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHH--HHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999988777432110 00 011 3489999999999987
No 79
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.50 E-value=2.4e-13 Score=93.71 Aligned_cols=99 Identities=21% Similarity=0.387 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHhcccchhhhhhh----c-C----CcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGAF----A-S----KGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIG 160 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~----~-~----~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l 160 (222)
+|+++++|+.+..+.+.+.+...+ . . ++...+...+ +.+.++.+|+.|++++|++|+++|+||+++++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~ 81 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSA 81 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHH
Confidence 578899999998888877754432 1 1 1223345566 9999999999999889999999999999999987
Q ss_pred HHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhh
Q 027498 161 IWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVI 196 (222)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (222)
...... . ....++|+|++|++++.++|+|
T Consensus 82 ~~~~~~----~---~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 82 YRWFEL----P---IERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHc----c---cccccCchHHHHHHHHHhCCCC
Confidence 543211 2 1245899999999999999975
No 80
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.50 E-value=8e-14 Score=98.22 Aligned_cols=111 Identities=23% Similarity=0.336 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHhcccchhhhhhhc-------CCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGAFA-------SKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIW 162 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~ 162 (222)
+++.+++|+.+++..+.+.+...+. .+....+...+ +.+.++.||+.|++++|++|+++|+||+++++.+.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~ 80 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLL 80 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHH
Confidence 3678899999988877776543322 12234455666 999999999999988999999999999999999888
Q ss_pred HHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCCChHH
Q 027498 163 GRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHE 205 (222)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 205 (222)
+.... ..... ...+|++++|++++.++|++++++.+.+-
T Consensus 81 ~~~~~--~~~~~--~~~~p~l~~w~~~~~~~p~~~~~~~~~~~ 119 (123)
T cd03181 81 GFTYV--FDKEW--RAKYPNVTRWFNTVVNQPIFKAVFGEVKL 119 (123)
T ss_pred HHHHH--cCHHH--HHhChHHHHHHHHHHcCHHHHHHcCCCCc
Confidence 63221 11112 23799999999999999999998877543
No 81
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.49 E-value=1.8e-13 Score=95.78 Aligned_cols=104 Identities=19% Similarity=0.255 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHhcccchhhhhhhc----CCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGAFA----SKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRI 165 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~ 165 (222)
+++++++|+.+....+.+.....+. .++...+...+ +.+.++.||+.|++++|++|+++|+||+++++++.++..
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~ 81 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEA 81 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHH
Confidence 4788889988887766655433221 22244556667 999999999999888999999999999999999988743
Q ss_pred HHHHhcccccCCCcccHHHHHHHHHhcchhhhhcC
Q 027498 166 VEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACI 200 (222)
Q Consensus 166 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 200 (222)
. .+.+ ...+|+|.+|++++.++|++++..
T Consensus 82 ~---~~~~---~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 82 L---LPLD---LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred h---cCCC---hhhCchHHHHHHHHHcccchHHHH
Confidence 1 1222 347999999999999999999854
No 82
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=4.3e-13 Score=102.18 Aligned_cols=200 Identities=25% Similarity=0.245 Sum_probs=136.1
Q ss_pred cceEEeeccCCchHHHHHHHHHHhCCC----ceEEeCCCCCCchhhhh------------------------------hC
Q 027498 4 ESVKLLGYWASPFALRVKWALKLKGVH----YEYVEENLPNKSPLLLR------------------------------YN 49 (222)
Q Consensus 4 ~~~~L~~~~~s~~~~~vr~~L~~~gi~----~~~~~~~~~~~~~~~~~------------------------------~~ 49 (222)
..+.||..-.|||++|+.++++.+|+. +..+.--...+...|.. -+
T Consensus 36 gryhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~ 115 (319)
T KOG2903|consen 36 GRYHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIAS 115 (319)
T ss_pred ceEEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcC
Confidence 468999999999999999999999975 33221100000011111 11
Q ss_pred C----CCCcccEEEe---CCeecchHHHHHHHHHhhC---------CCCCCCCCCHHHHHHHHHHHHHHhcccchhhhh-
Q 027498 50 P----VYKKIPVLVH---NGKPLAESLLIIEYIDEAW---------KQNPLLPDDPYERANARFWAKFFDEKCVPEVMG- 112 (222)
Q Consensus 50 p----~~~~vP~l~~---~~~~i~es~~I~~yL~~~~---------~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 112 (222)
| .+ +||+|=| ...+-.||..|++.+...+ +.-.|+| +..+++++.+..|+.+.+..-+.+
T Consensus 116 p~Y~grf-TVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P--~~L~~~Ide~N~wvy~~INNGVYk~ 192 (319)
T KOG2903|consen 116 PNYTGRF-TVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYP--SSLRAQIDETNSWVYDKINNGVYKC 192 (319)
T ss_pred CCCCceE-EEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCC--HHHHHHHhhhhceecccccCceeee
Confidence 1 21 7999976 3355689999999998322 2223677 457999999999888776655443
Q ss_pred hhcCCcHHHHHHHH-HHHHHHHHHHHhcCCC--cccCCCCChhHHHHHhHHHHHH-HHHHHhcc--cccCCCcccHHHHH
Q 027498 113 AFASKGEEQEKAAK-ARENLKMLERALEGKP--FFGGDKIGFLDIAVGWIGIWGR-IVEEIAGV--SLIDAETMPLLTAW 186 (222)
Q Consensus 113 ~~~~~~~~~~~~~~-~~~~l~~le~~L~~~~--~l~G~~~t~aD~~l~~~l~~~~-~~~~~~~~--~~~~~~~~p~l~~~ 186 (222)
-|-...+.=+..-+ +-+.|+.+|..|+++. |++|+++|.||+.|++.+-++. ....++.. ..+ ...||+|..|
T Consensus 193 GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~i-r~~Yp~l~~~ 271 (319)
T KOG2903|consen 193 GFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTI-RDEYPNLHNW 271 (319)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhh-hccCcHHHHH
Confidence 23333444444455 8889999999998866 8999999999999999876663 22222222 222 3589999999
Q ss_pred HHHHhc-chhhhhcCCChHHHHH
Q 027498 187 LNNFLE-VPVIKACIPSWHELLE 208 (222)
Q Consensus 187 ~~~~~~-~p~~~~~~~~~~~~~~ 208 (222)
.+.+.. .|+++.+.. .+++..
T Consensus 272 lk~iY~~~~~~~~Ttd-~~hIk~ 293 (319)
T KOG2903|consen 272 LKNIYWNIPGFSSTTD-FNHIKL 293 (319)
T ss_pred HHHHHhhccchhhccc-hhHHhh
Confidence 999998 899998854 444433
No 83
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.45 E-value=4.4e-13 Score=94.90 Aligned_cols=103 Identities=24% Similarity=0.349 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHhcccchhhhh---------hhc---CCcHHHHHHHH-HHHHHHHHHHH-hcCCCcccCCCCChhHHHHH
Q 027498 92 RANARFWAKFFDEKCVPEVMG---------AFA---SKGEEQEKAAK-ARENLKMLERA-LEGKPFFGGDKIGFLDIAVG 157 (222)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~-~~~~l~~le~~-L~~~~~l~G~~~t~aD~~l~ 157 (222)
++++++|+.+....+.+.+.. .+. ..++..+...+ +.+.++.+|+. +++++|++|+++|+|||+++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 456677777776555443221 111 13444456667 99999999997 55578999999999999999
Q ss_pred hHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhc--chhhhhcC
Q 027498 158 WIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLE--VPVIKACI 200 (222)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--~p~~~~~~ 200 (222)
+.+.+.... +.+.+ .++|+|++|++++.+ ||++++..
T Consensus 82 ~~~~~~~~~----~~~~~--~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 82 CEIMQPEAA----GYDVF--EGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred HHHHHHHhc----CCccc--ccCchHHHHHHHHHHhcchhHHHHH
Confidence 988766322 33332 489999999999999 99999854
No 84
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.43 E-value=5.7e-13 Score=89.70 Aligned_cols=94 Identities=17% Similarity=0.253 Sum_probs=73.8
Q ss_pred HHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCC
Q 027498 72 IEYIDEAWKQNPLLPDDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIG 150 (222)
Q Consensus 72 ~~yL~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t 150 (222)
+|||++..+ ++|.++.+.+.+++|++.....+.. ...+ +.+.++.+|++|++++|++|+++|
T Consensus 1 ~r~~~~~~~---~~~~~~~~~~~vd~~~d~~~~~l~~--------------~~~~~~~~~l~~le~~L~~~~fl~Gd~~t 63 (96)
T cd03200 1 ARFLYRLLG---PAPNAPNAATNIDSWVDTAIFQLAE--------------GSSKEKAAVLRALNSALGRSPWLVGSEFT 63 (96)
T ss_pred CchHHHHhc---ccCCCchHHHHHHHHHHHHHHHHhc--------------CCHHHHHHHHHHHHHHHcCCCccCCCCCC
Confidence 478888833 9999999999999999976533220 1223 667888999999999999999999
Q ss_pred hhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhc
Q 027498 151 FLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLE 192 (222)
Q Consensus 151 ~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (222)
+|||++++.+.+. +.. ...||++.+|++++.+
T Consensus 64 iADi~l~~~l~~~-------~~~---~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 64 VADIVSWCALLQT-------GLA---SAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHc-------ccc---cccChHHHHHHHHHHh
Confidence 9999999887643 211 2489999999999975
No 85
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.42 E-value=9.6e-13 Score=88.37 Aligned_cols=70 Identities=30% Similarity=0.520 Sum_probs=58.6
Q ss_pred HHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcch
Q 027498 120 EQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVP 194 (222)
Q Consensus 120 ~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 194 (222)
..+.... +.+.|+.+|+.|++++|++|+++|+||+++++.+.++... +.... .++||+|.+|++++.+||
T Consensus 25 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 25 MVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERL----GPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH----TTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHh----CCCcc-cccCHHHHHHHHHHHcCC
Confidence 4455566 9999999999999999999999999999999999988544 44433 259999999999999997
No 86
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.42 E-value=6.1e-13 Score=90.79 Aligned_cols=74 Identities=23% Similarity=0.373 Sum_probs=62.9
Q ss_pred HHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhh
Q 027498 120 EQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKA 198 (222)
Q Consensus 120 ~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 198 (222)
..+...+ +.+.++.||+.|++++|++|+++|+|||++++.+.+.... + . ...+|++++|++++.++|++++
T Consensus 27 ~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~----~--~--~~~~p~l~~w~~~~~~~p~~~~ 98 (103)
T cd03207 27 ARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF----G--L--LPERPAFDAYIARITDRPAFQR 98 (103)
T ss_pred hhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc----C--C--CCCChHHHHHHHHHHcCHHHHH
Confidence 3455567 9999999999999899999999999999999999887421 2 2 2489999999999999999998
Q ss_pred cCC
Q 027498 199 CIP 201 (222)
Q Consensus 199 ~~~ 201 (222)
+.+
T Consensus 99 ~~~ 101 (103)
T cd03207 99 AAA 101 (103)
T ss_pred Hhc
Confidence 765
No 87
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.42 E-value=1.3e-12 Score=90.84 Aligned_cols=102 Identities=19% Similarity=0.189 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHhcccchhhhhh-----hcCC--cHHHHHHHH-HHHHHHHHHHHhc-CCCcccCCCCChhHHHHHhHH
Q 027498 90 YERANARFWAKFFDEKCVPEVMGA-----FASK--GEEQEKAAK-ARENLKMLERALE-GKPFFGGDKIGFLDIAVGWIG 160 (222)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~-~~~~l~~le~~L~-~~~~l~G~~~t~aD~~l~~~l 160 (222)
.+++++++|+.++++.+.+..... +... +...+...+ +.+.+..+|..|+ +++|++| ++|+||+++++.+
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~ 80 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALML 80 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHH
Confidence 478999999999999887653211 2111 123456677 9999999999995 5589999 5999999999999
Q ss_pred HHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCC
Q 027498 161 IWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIP 201 (222)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 201 (222)
.++... +.++ . |++.+|++|+.+||++++.++
T Consensus 81 ~~~~~~----g~~l----~-p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 81 NRLVLN----GDPV----P-ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHc----CCCC----C-HHHHHHHHHHHCCHHHHHHHh
Confidence 988543 5443 2 899999999999999998764
No 88
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.37 E-value=2.3e-12 Score=87.47 Aligned_cols=70 Identities=29% Similarity=0.477 Sum_probs=57.7
Q ss_pred HHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhh
Q 027498 120 EQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVI 196 (222)
Q Consensus 120 ~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 196 (222)
..++... +.+.+..+|+.|++++|++|+++|+||+++++++.+... .+ +...++|+|++|++++.++|++
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~---~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPE----GG---VDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhc----cC---CChhhCcHHHHHHHHHHhCcCC
Confidence 4456677 999999999999999999999999999999998865421 11 2235899999999999999975
No 89
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.36 E-value=2.6e-12 Score=81.08 Aligned_cols=67 Identities=31% Similarity=0.385 Sum_probs=54.1
Q ss_pred HHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHH
Q 027498 119 EEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNN 189 (222)
Q Consensus 119 ~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~ 189 (222)
...+.+.+ +.+.++.||+.|++++|++|++||+||+++++.+.++...... ..+ .+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~--~~~--~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPD--FDL--LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHT--CCH--HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcC--cCc--cccCHHHHHHHhC
Confidence 34567778 9999999999999999999999999999999999999765332 122 3599999999986
No 90
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.33 E-value=6.9e-12 Score=85.71 Aligned_cols=94 Identities=24% Similarity=0.306 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHhcccchhhhhh---------hcCCcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGA---------FASKGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIG 160 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l 160 (222)
+|+++++|+.+..+.+.+.+... -..+++..+...+ +.+.++.||+.|++++|++|+++|+||+++++.+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHH
Confidence 57899999998877766654331 1122344556667 9999999999998889999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCcccHHHHHHHHHh
Q 027498 161 IWGRIVEEIAGVSLIDAETMPLLTAWLNNFL 191 (222)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 191 (222)
.++... +.+ ..++|++.+|+++++
T Consensus 82 ~~~~~~----~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 82 HVADEG----GFD---LADYPAIRAWLARIE 105 (105)
T ss_pred Hhcccc----CCC---hHhCccHHHHHHhhC
Confidence 887432 222 347999999999874
No 91
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.32 E-value=9e-12 Score=85.60 Aligned_cols=74 Identities=22% Similarity=0.277 Sum_probs=58.9
Q ss_pred HHHHHHHH-HHHHHHHHHHHhcCC----------CcccCCCCChhHHHHHhHHHHHHHHHHHhccccc--CCCcccHHHH
Q 027498 119 EEQEKAAK-ARENLKMLERALEGK----------PFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLI--DAETMPLLTA 185 (222)
Q Consensus 119 ~~~~~~~~-~~~~l~~le~~L~~~----------~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~--~~~~~p~l~~ 185 (222)
+..+...+ +.+.++.||++|.++ +|++|+++|+|||++++.+.++... +.+.. ....||+|.+
T Consensus 25 ~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 25 EYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNGKRPNLEA 100 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----CccccccccccChHHHH
Confidence 34456667 999999999999764 4999999999999999999888532 22211 0247999999
Q ss_pred HHHHHhcchhh
Q 027498 186 WLNNFLEVPVI 196 (222)
Q Consensus 186 ~~~~~~~~p~~ 196 (222)
|++++.+||+|
T Consensus 101 w~~rv~aRpsf 111 (111)
T cd03204 101 YFERVLQRESF 111 (111)
T ss_pred HHHHHHcCCCC
Confidence 99999999985
No 92
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.28 E-value=1.6e-11 Score=77.76 Aligned_cols=60 Identities=15% Similarity=0.172 Sum_probs=49.9
Q ss_pred cCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhh
Q 027498 12 WASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEA 78 (222)
Q Consensus 12 ~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~ 78 (222)
+.+++|.+++++|++.|+||+.+.... .. ..+|. |+||+|++||.+|+||.+|+.||+++
T Consensus 15 ~~~~~~~kv~~~L~elglpye~~~~~~----~~--~~~P~-GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNVRCRAN----AE--FMSPS-GKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEEEecCC----cc--ccCCC-CcccEEEECCEEEeCHHHHHHHHhcC
Confidence 457899999999999999999884321 11 25676 89999999999999999999999863
No 93
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.27 E-value=1.1e-11 Score=83.93 Aligned_cols=94 Identities=26% Similarity=0.320 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHH-HHHHHHHHHHHhcCCC--cccCCCCChhHHHHHhHHHHHHH
Q 027498 89 PYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGKP--FFGGDKIGFLDIAVGWIGIWGRI 165 (222)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~le~~L~~~~--~l~G~~~t~aD~~l~~~l~~~~~ 165 (222)
+..++.+++|+++.. ................+...+ +.+.+..|++.|+.++ |++|++||+||+++++.+..+..
T Consensus 3 ~~~~a~i~~W~~f~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~ 80 (99)
T PF14497_consen 3 PYWRALIDRWLDFSV--AFRRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRW 80 (99)
T ss_dssp -TTHHHHHHHHH-GH--CCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHhccc--hhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhh
Confidence 446777888888441 000000011112334455566 9999999999998766 99999999999999998866531
Q ss_pred HHHHhcccccCCCcccHHHHHHHHHhc
Q 027498 166 VEEIAGVSLIDAETMPLLTAWLNNFLE 192 (222)
Q Consensus 166 ~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (222)
. ++ +++||+|.+|++||++
T Consensus 81 -----~-~~--~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 81 -----A-DF--PKDYPNLVRWYERIEE 99 (99)
T ss_dssp -----C-HH--TTTCHHHHHHHHHHHT
T ss_pred -----c-cc--ccccHHHHHHHHhhcC
Confidence 1 11 1589999999999974
No 94
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.27 E-value=3e-11 Score=82.48 Aligned_cols=95 Identities=18% Similarity=0.132 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHhcccchhhhhhhcCC-----cHHHHHHHH-HHHHHHHHHHHhcC--CCcccCCCCChhHHHHHhHHHH
Q 027498 91 ERANARFWAKFFDEKCVPEVMGAFASK-----GEEQEKAAK-ARENLKMLERALEG--KPFFGGDKIGFLDIAVGWIGIW 162 (222)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~l~~le~~L~~--~~~l~G~~~t~aD~~l~~~l~~ 162 (222)
++++++.++...++.........+... ++..+...+ +.+.++.||+.|.+ ++|++|+++|+||+++++.+.+
T Consensus 2 e~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~ 81 (104)
T cd03192 2 EAARVDALVDTIADLRAEFAKYFYEKDGEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDY 81 (104)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHH
Confidence 467888888887666555554445332 334445566 99999999999977 8999999999999999999988
Q ss_pred HHHHHHHhcccccCCCcccHHHHHHHHH
Q 027498 163 GRIVEEIAGVSLIDAETMPLLTAWLNNF 190 (222)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 190 (222)
+... +... ....||++++|++++
T Consensus 82 ~~~~----~~~~-~~~~~p~l~~~~~~~ 104 (104)
T cd03192 82 LLYL----DPKL-LLKKYPKLKALRERV 104 (104)
T ss_pred HHhh----Cchh-hHHhChhHHHHHHhC
Confidence 8533 2222 134799999999875
No 95
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.26 E-value=2.8e-11 Score=78.44 Aligned_cols=72 Identities=24% Similarity=0.283 Sum_probs=63.1
Q ss_pred cceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 4 ESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 4 ~~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
.+++||+.++||+|.+++.+|...|++|+.+.++......++...++. .++|++..||..+.++..|.+||+
T Consensus 8 ~~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~~~~~~~~~~~g~-~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 8 ESVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGNDARGRSLRAVTGA-TTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CCEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCChHHHHHHHHHCC-CCcCeEEECCEEEcCHHHHHHHhC
Confidence 479999999999999999999999999999998755444556666676 689999999999999999999985
No 96
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.26 E-value=4e-11 Score=83.38 Aligned_cols=72 Identities=21% Similarity=0.298 Sum_probs=56.0
Q ss_pred HHHHHHH-HHHHHHHHHHHh---cCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchh
Q 027498 120 EQEKAAK-ARENLKMLERAL---EGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPV 195 (222)
Q Consensus 120 ~~~~~~~-~~~~l~~le~~L---~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 195 (222)
..+...+ +.+.++.+|..+ ++++|++|+ +|+||+++++++.+.... +.+ ..|++++|++++.++|+
T Consensus 38 ~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~----~~~-----~~P~l~~~~~rv~~rPs 107 (114)
T cd03194 38 LSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTY----GLP-----LSPAAQAYVDALLAHPA 107 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHc----CCC-----CCHHHHHHHHHHHCCHH
Confidence 3445555 777777777776 467899999 999999999998887421 322 23999999999999999
Q ss_pred hhhcCC
Q 027498 196 IKACIP 201 (222)
Q Consensus 196 ~~~~~~ 201 (222)
+++++.
T Consensus 108 v~~~~~ 113 (114)
T cd03194 108 MQEWIA 113 (114)
T ss_pred HHHHHh
Confidence 998764
No 97
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.19 E-value=1.2e-10 Score=78.50 Aligned_cols=91 Identities=25% Similarity=0.482 Sum_probs=65.4
Q ss_pred HHHHHHHhcccchhhhhhhcC-------CcHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHH
Q 027498 96 RFWAKFFDEKCVPEVMGAFAS-------KGEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVE 167 (222)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~ 167 (222)
+.|+.+..+.+.+.+...... .++..+...+ +.+.++.||+.|++++|++|+++|+||+++++.+.++....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~ 81 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLG 81 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhh
Confidence 345556555554444333221 2445556677 99999999999998899999999999999999999986543
Q ss_pred HHhcccccCCCcccHHHHHHHHH
Q 027498 168 EIAGVSLIDAETMPLLTAWLNNF 190 (222)
Q Consensus 168 ~~~~~~~~~~~~~p~l~~~~~~~ 190 (222)
...+ . .+.+|++.+|++++
T Consensus 82 ~~~~--~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 82 PLLG--L--LDEYPRLAAWYDRL 100 (100)
T ss_pred hhhh--h--hccCccHHHHHHhC
Confidence 2211 1 24899999999875
No 98
>PRK10638 glutaredoxin 3; Provisional
Probab=99.12 E-value=3.7e-10 Score=73.92 Aligned_cols=71 Identities=15% Similarity=0.210 Sum_probs=62.1
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCC-CchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPN-KSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
++++|+.+.||+|++++.+|...|++|+.+.++... ..+++...++. +++|++..+|..+.+...+..+-.
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~-~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGR-TTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCC-CCcCEEEECCEEEeCHHHHHHHHH
Confidence 699999999999999999999999999999997653 45678888997 799999999999999887777544
No 99
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.11 E-value=3.5e-10 Score=79.80 Aligned_cols=67 Identities=31% Similarity=0.468 Sum_probs=55.4
Q ss_pred HHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhc
Q 027498 121 QEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLE 192 (222)
Q Consensus 121 ~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (222)
.+...+ +.+.++.+|+.|++++|+.|+++|+||+++++.+.++.... +.++ .+.+|+|.+|++||.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~---~~~~--~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVS---PFPL--LEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcC---cccc--cccCChHHHHHHHHhc
Confidence 445666 99999999999999999999999999999999998885421 2222 3489999999999986
No 100
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=99.10 E-value=5.5e-10 Score=71.02 Aligned_cols=71 Identities=24% Similarity=0.281 Sum_probs=60.7
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
+++||..+.||+|.+++.+|...|++|+.+.++.......+...... .++|.+..||..+.++..|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~~~~~~~~~~g~-~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGKDITGRSLRAVTGA-MTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCChhHHHHHHHhCC-CCcCeEEECCEEEeCHHHHHHHhC
Confidence 68999999999999999999999999999998755433445555565 589999999999999999999984
No 101
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.10 E-value=1.8e-10 Score=76.27 Aligned_cols=67 Identities=25% Similarity=0.135 Sum_probs=51.6
Q ss_pred HHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccc--cCCCcccHHHHHHHHHh
Q 027498 123 KAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSL--IDAETMPLLTAWLNNFL 191 (222)
Q Consensus 123 ~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~ 191 (222)
...+ +.+.++.+|+.|++++|++|+++|+|||++++.+.++... ...... .....+|++++|++++.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~--~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYA--PLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhc--CCCChHHHHHHHhCcHHHHHHHHhC
Confidence 5566 9999999999999999999999999999999998877421 001100 01247999999999973
No 102
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=99.00 E-value=2.7e-09 Score=67.85 Aligned_cols=58 Identities=31% Similarity=0.469 Sum_probs=49.6
Q ss_pred CCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhh
Q 027498 13 ASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEA 78 (222)
Q Consensus 13 ~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~ 78 (222)
.||+|.++.++|+..|+||+.+...-. ...|. |++|+|+++|..+.||..|++||.++
T Consensus 15 ~sp~clk~~~~Lr~~~~~~~v~~~~n~-------~~sp~-gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 15 VDPECLAVLAYLKFAGAPLKVVPSNNP-------WRSPT-GKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEecCCC-------CCCCC-CccCEEEECCEEecChHHHHHHHHHc
Confidence 469999999999999999988755411 24576 89999999999999999999999874
No 103
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.89 E-value=1.4e-07 Score=74.51 Aligned_cols=170 Identities=24% Similarity=0.308 Sum_probs=114.8
Q ss_pred CchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEe-CCeecchHHHHHHHHHhhCCCCCCCCC-CHHH
Q 027498 14 SPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVH-NGKPLAESLLIIEYIDEAWKQNPLLPD-DPYE 91 (222)
Q Consensus 14 s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~-~~~~i~es~~I~~yL~~~~~~~~l~p~-~~~~ 91 (222)
++.|.++.+++..++-|.+.+... +.+ ..|. |++|+|+. +|..+++-.-|..+|...-.+..+-+. ...+
T Consensus 17 d~~sL~~l~y~kl~~~~l~v~~ss----N~~---~s~s-g~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~~kq 88 (313)
T KOG3028|consen 17 DPDSLAALIYLKLAGAPLKVVVSS----NPW---RSPS-GKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLSAKQ 88 (313)
T ss_pred ChhHHHHHHHHHHhCCCceeEeec----CCC---CCCC-CCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHHHHH
Confidence 577999999999999665555543 111 3565 89999994 779999999999999984222223332 2567
Q ss_pred HHHHHHHHHHHhcccchhhhhhh---------------c---------------------------CCcH-HHHHHHH-H
Q 027498 92 RANARFWAKFFDEKCVPEVMGAF---------------A---------------------------SKGE-EQEKAAK-A 127 (222)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~---------------~---------------------------~~~~-~~~~~~~-~ 127 (222)
++....|..+++..+.+++...+ . ...+ ..+.... .
T Consensus 89 ~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~A 168 (313)
T KOG3028|consen 89 LADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKDA 168 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHHH
Confidence 77788888888777666544210 0 1111 1122233 8
Q ss_pred HHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccc-cCCCcccHHHHHHHHHhc
Q 027498 128 RENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSL-IDAETMPLLTAWLNNFLE 192 (222)
Q Consensus 128 ~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~ 192 (222)
.+++..|.+.|+...|++|++||-.|+.++..+..+-..+ .-.-.+ .-...+++|.++++++..
T Consensus 169 ska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~-Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 169 SKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVA-LPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhcc-CCchhHHHHHHhcchHHHHHHHHHH
Confidence 8899999999999999999999999999999887741110 000000 001248999999999986
No 104
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.89 E-value=1.1e-08 Score=69.02 Aligned_cols=66 Identities=24% Similarity=0.321 Sum_probs=51.1
Q ss_pred cHHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHH
Q 027498 118 GEEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNF 190 (222)
Q Consensus 118 ~~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 190 (222)
++..+...+ +.+.++.+|+.|++++| +++|+||+++++.+.+...... +... ..+||+|++|+++|
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~--~~~~--~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHP--DLDW--RAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHcc--Ccch--hhhChHHHHHHHhC
Confidence 344556677 99999999999998888 7899999999999988843210 1111 35899999999985
No 105
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.88 E-value=8.6e-09 Score=65.65 Aligned_cols=68 Identities=15% Similarity=0.147 Sum_probs=57.4
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeecchHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIE 73 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~ 73 (222)
+++||+.+.||+|++++.+|...||+|+.+.++.. ...+++.+.++. +++|++..||..|.+-....+
T Consensus 2 ~v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~-~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 2 RVTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGS-SVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred EEEEEecCCChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCC-CCcCEEEECCEEEeCHHHHHh
Confidence 58999999999999999999999999999998754 335678888887 799999999888876655443
No 106
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.82 E-value=4.5e-08 Score=66.20 Aligned_cols=104 Identities=18% Similarity=0.177 Sum_probs=71.3
Q ss_pred CHHHHHHHHHHHHHHhcccchhhhh-----hhcCC--cHHHHHHHH-HHHHHHHHHHHhcC-CCcccCCCCChhHHHHHh
Q 027498 88 DPYERANARFWAKFFDEKCVPEVMG-----AFASK--GEEQEKAAK-ARENLKMLERALEG-KPFFGGDKIGFLDIAVGW 158 (222)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~-~~~~l~~le~~L~~-~~~l~G~~~t~aD~~l~~ 158 (222)
|..+|++++++..++.+.+.+.=.. +|... ....+.... +.+.+...+..|.. ++||+|+ .||||..+++
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ 79 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLAL 79 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHH
Confidence 4678999999999999987665221 22211 223345556 88888889998864 6899997 9999999999
Q ss_pred HHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhhcCC
Q 027498 159 IGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIP 201 (222)
Q Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 201 (222)
+++++... +..+. +.++.|.++.-++|++++.+.
T Consensus 80 ml~Rl~~~----gd~vP-----~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 80 MLNRLVTY----GDPVP-----ERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHTT----T---------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHc----CCCCC-----HHHHHHHHHHHCCHHHHHHHH
Confidence 99998532 33322 479999999999999998754
No 107
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.81 E-value=1.6e-08 Score=65.69 Aligned_cols=61 Identities=13% Similarity=0.230 Sum_probs=48.2
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecc
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLA 66 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~ 66 (222)
+++||+.+.||+|.+++-+|..+||+|+.+.++-.....+....++. .++|+++.++..+.
T Consensus 2 ~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~~~g~-~~vPvv~i~~~~~~ 62 (81)
T PRK10329 2 RITIYTRNDCVQCHATKRAMESRGFDFEMINVDRVPEAAETLRAQGF-RQLPVVIAGDLSWS 62 (81)
T ss_pred EEEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCC-CCcCEEEECCEEEe
Confidence 68999999999999999999999999999999744222222334576 69999998776554
No 108
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.78 E-value=2.7e-08 Score=70.30 Aligned_cols=70 Identities=16% Similarity=0.067 Sum_probs=54.1
Q ss_pred HHHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHH-H-H-HhcccccCCCcccHHHHHHHHHh
Q 027498 119 EEQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIV-E-E-IAGVSLIDAETMPLLTAWLNNFL 191 (222)
Q Consensus 119 ~~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~-~-~-~~~~~~~~~~~~p~l~~~~~~~~ 191 (222)
...+...+ ..+.++.|+..|++++|++|++||.+|+++++.+..+... . . ... .. .++||+|.+|++||.
T Consensus 53 ~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~-~~--~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 53 KTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELA-EK--VKKYSNLLAFCRRIE 126 (126)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHH-HH--HHhCcHHHHHHHhcC
Confidence 34566667 9999999999999999999999999999999998777421 0 0 101 11 348999999999974
No 109
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.77 E-value=3.6e-08 Score=62.02 Aligned_cols=69 Identities=16% Similarity=0.174 Sum_probs=59.2
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCC-CchhhhhhCCCCCcccEEEeCCeecchHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPN-KSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEY 74 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~y 74 (222)
++++|+.+.||+|++++.+|...|++|+.+.++... ..+++...++. .++|++..+|..+.++..|.+.
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~-~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGW-PTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCC-CCcCEEEECCEEEecHHHHHHh
Confidence 589999999999999999999999999999886543 34666777887 7999999999999999887764
No 110
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.76 E-value=3.3e-08 Score=70.89 Aligned_cols=64 Identities=19% Similarity=0.187 Sum_probs=46.7
Q ss_pred HHH-HHHHHHHHHHHh-cCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhc
Q 027498 124 AAK-ARENLKMLERAL-EGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLE 192 (222)
Q Consensus 124 ~~~-~~~~l~~le~~L-~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 192 (222)
.++ +.+.++.+-+.+ ++++|+.|++||+||+++++.+..+.... +.. +..+||+|.+|++||.+
T Consensus 80 ~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~---~~~--Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 80 VREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHP---AFK--DMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhc---ccc--chhhCcCHHHHHHHHHH
Confidence 344 555555554555 45689999999999999999998875431 220 23489999999999986
No 111
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.76 E-value=2.7e-08 Score=62.91 Aligned_cols=62 Identities=21% Similarity=0.294 Sum_probs=52.0
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeecch
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPLAE 67 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i~e 67 (222)
++++|+.++||+|.+++.+|.+.|++|..+.++.. ...+++.+.+|. +++|++..+|..+.+
T Consensus 1 ~v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~-~~vP~i~~~~~~i~g 63 (73)
T cd02976 1 EVTVYTKPDCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGY-RSVPVVVIGDEHLSG 63 (73)
T ss_pred CEEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCC-cccCEEEECCEEEec
Confidence 47999999999999999999999999999998754 334567788887 799999988766544
No 112
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.75 E-value=4.1e-08 Score=62.20 Aligned_cols=70 Identities=19% Similarity=0.195 Sum_probs=55.5
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCC-CchhhhhhCCCCCcccEEEeCCeec--chHHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPN-KSPLLLRYNPVYKKIPVLVHNGKPL--AESLLIIEYI 75 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~vP~l~~~~~~i--~es~~I~~yL 75 (222)
+++||+.++||+|++++.+|...|++|..+.++... ..+++.+.++. ..+|++..+|..+ .+...|.++|
T Consensus 1 ~i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~-~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 1 KVKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQ-RGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred CEEEEcCCCChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCC-CcccEEEECCEEEeeCCHHHHHHHh
Confidence 379999999999999999999999999998886432 23456677887 7899999888776 5566666554
No 113
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.75 E-value=3.9e-08 Score=70.50 Aligned_cols=72 Identities=21% Similarity=0.110 Sum_probs=53.9
Q ss_pred HHHHHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHH-HhcccccCCCcccHHHHHHHHHhc
Q 027498 120 EQEKAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEE-IAGVSLIDAETMPLLTAWLNNFLE 192 (222)
Q Consensus 120 ~~~~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~-~~~~~~~~~~~~p~l~~~~~~~~~ 192 (222)
..+...+ ..+.++.|++.|++++|++|+++|.+|+.+++.+..+..... ....... ..+||+|.+|++|+.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~-~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNH-LKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHH-HHHCcHHHHHHHHHHH
Confidence 4455666 889999999999999999999999999999998876632100 0000011 3489999999999985
No 114
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.71 E-value=6.7e-08 Score=61.71 Aligned_cols=71 Identities=15% Similarity=0.189 Sum_probs=56.5
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYI 75 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL 75 (222)
+++||+.+.||+|.+++-+|...|++|+.+.++.. ...+++........++|++..+|..+.+...+.++-
T Consensus 1 ~i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~ 72 (75)
T cd03418 1 KVEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALE 72 (75)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHH
Confidence 48999999999999999999999999999999743 222344444443128999999999999988888754
No 115
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.60 E-value=2.4e-07 Score=59.33 Aligned_cols=70 Identities=14% Similarity=0.241 Sum_probs=52.5
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhC-CCCCcccEEE-eCCeecch--HHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYN-PVYKKIPVLV-HNGKPLAE--SLLIIEYI 75 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~-p~~~~vP~l~-~~~~~i~e--s~~I~~yL 75 (222)
+++||+.++||+|++++.+|...|++|+.+.++-. ...+.+.+.+ +. ..+|+++ ++|..+.+ +..|..+|
T Consensus 1 ~v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~-~~vP~i~~~~g~~l~~~~~~~~~~~l 75 (77)
T TIGR02200 1 TITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGN-MTVPTVKFADGSFLTNPSAAQVKAKL 75 (77)
T ss_pred CEEEEECCCChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCC-ceeCEEEECCCeEecCCCHHHHHHHh
Confidence 47999999999999999999999999999888644 2234555665 76 7899997 56666543 33444444
No 116
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.59 E-value=2.9e-07 Score=59.55 Aligned_cols=69 Identities=20% Similarity=0.291 Sum_probs=54.0
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCC--Cc-hhhhhhCCCCCcccEEEeCCeecchHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPN--KS-PLLLRYNPVYKKIPVLVHNGKPLAESLLIIEY 74 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~--~~-~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~y 74 (222)
.+++|..+.||||.+++-+|..+|++|+++.++... .. +.....++. .+||++..|+..+......-++
T Consensus 2 ~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~-~tvP~I~i~~~~igg~~d~~~~ 73 (80)
T COG0695 2 NVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQ-RTVPQIFIGGKHVGGCDDLDAL 73 (80)
T ss_pred CEEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCC-CCcCEEEECCEEEeCcccHHHH
Confidence 589999999999999999999999999999987664 33 333445476 7999999988777654444443
No 117
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.54 E-value=3.7e-07 Score=58.95 Aligned_cols=71 Identities=14% Similarity=0.139 Sum_probs=58.3
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHh
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDE 77 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~ 77 (222)
+++|+.+.||+|.+++-+|...|++|+.+.++.. ...+++.+.... ..+|++..+|..+.+...+.++-++
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~-~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGR-RTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCC-CCcCEEEECCEEEcChHHHHHHHHc
Confidence 5799999999999999999999999999999754 233455666665 6899999999999888887776554
No 118
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.52 E-value=3e-07 Score=58.30 Aligned_cols=57 Identities=16% Similarity=0.245 Sum_probs=44.3
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCe
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGK 63 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~ 63 (222)
++||+.+.||+|++++-+|...|++|+.+.++-.....+.....+. .+||++..+|.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~~g~-~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKAQGF-RQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCC-cccCEEEECCC
Confidence 5899999999999999999999999999998754322222333454 58999997553
No 119
>PHA03050 glutaredoxin; Provisional
Probab=98.49 E-value=1.1e-06 Score=60.24 Aligned_cols=70 Identities=13% Similarity=0.166 Sum_probs=58.2
Q ss_pred CcceEEeeccCCchHHHHHHHHHHhCC---CceEEeCCCCCC----chhhhhhCCCCCcccEEEeCCeecchHHHHHH
Q 027498 3 EESVKLLGYWASPFALRVKWALKLKGV---HYEYVEENLPNK----SPLLLRYNPVYKKIPVLVHNGKPLAESLLIIE 73 (222)
Q Consensus 3 ~~~~~L~~~~~s~~~~~vr~~L~~~gi---~~~~~~~~~~~~----~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~ 73 (222)
+.++++|..++||||.+++-+|...|+ +|+.+.++-... .+++.+.+.. .+||.+..+|..|.+...+..
T Consensus 12 ~~~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~-~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 12 NNKVTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGG-RTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred cCCEEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCC-CCcCEEEECCEEEeChHHHHH
Confidence 457999999999999999999999999 899999885322 3556677776 689999999999888877666
No 120
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.49 E-value=8.7e-07 Score=58.08 Aligned_cols=76 Identities=17% Similarity=0.243 Sum_probs=61.0
Q ss_pred ceEEeeccCCchHHHHHHHHHH-----hCCCceEEeCCCCC-CchhhhhhCCC-CCcccEEEeCCeecchHHHHHHHHHh
Q 027498 5 SVKLLGYWASPFALRVKWALKL-----KGVHYEYVEENLPN-KSPLLLRYNPV-YKKIPVLVHNGKPLAESLLIIEYIDE 77 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~-----~gi~~~~~~~~~~~-~~~~~~~~~p~-~~~vP~l~~~~~~i~es~~I~~yL~~ 77 (222)
++++|+.+.||+|.+++-+|.. .|++|+.+.++... ..+++...... ..++|.+..||..+.+...|.+++.+
T Consensus 2 ~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~~~~ 81 (85)
T PRK11200 2 FVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAYVKE 81 (85)
T ss_pred EEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHHHHH
Confidence 6899999999999999999999 89999999987431 12344433221 13799999999999999999999988
Q ss_pred hCC
Q 027498 78 AWK 80 (222)
Q Consensus 78 ~~~ 80 (222)
.++
T Consensus 82 ~~~ 84 (85)
T PRK11200 82 NLG 84 (85)
T ss_pred hcc
Confidence 764
No 121
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=98.48 E-value=1.4e-06 Score=58.75 Aligned_cols=72 Identities=18% Similarity=0.140 Sum_probs=57.8
Q ss_pred CCcceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCch----hhhhhCCCCCcccEEEeCCeecchHHHHHHH
Q 027498 2 AEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSP----LLLRYNPVYKKIPVLVHNGKPLAESLLIIEY 74 (222)
Q Consensus 2 ~~~~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~----~~~~~~p~~~~vP~l~~~~~~i~es~~I~~y 74 (222)
++.++++|..+.||||.+++-+|...|++|+.+.++...... .+...+.. .++|.+..+|..|.+...+...
T Consensus 6 ~~~~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~-~tvP~Vfi~g~~iGG~ddl~~l 81 (99)
T TIGR02189 6 SEKAVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCS-PAVPAVFVGGKLVGGLENVMAL 81 (99)
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCC-CCcCeEEECCEEEcCHHHHHHH
Confidence 345899999999999999999999999999999998543222 24444555 6899999999999888777663
No 122
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.44 E-value=2.8e-07 Score=56.19 Aligned_cols=59 Identities=24% Similarity=0.319 Sum_probs=49.0
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeec
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPL 65 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i 65 (222)
+++|+.+.||+|.+++-+|...|++|+.+.++.. ...+++.+.... .++|++..||..|
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~-~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGV-RTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSS-SSSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCC-CccCEEEECCEEC
Confidence 5799999999999999999999999999999865 344556666554 6899999888654
No 123
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.38 E-value=2.9e-06 Score=54.98 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=59.8
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCc----hhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHh
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKS----PLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDE 77 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~----~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~ 77 (222)
++++|+.+.||+|.+++-+|...+++|+.+.++..... ..+.+.+.. .++|.+..+|..+.++..|.++..+
T Consensus 1 ~v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~-~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 1 PVVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQ-RTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCC-CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 58899999999999999999999999999998766432 234455555 5899999999999999999887754
No 124
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=98.37 E-value=2.8e-06 Score=55.82 Aligned_cols=75 Identities=13% Similarity=0.238 Sum_probs=57.5
Q ss_pred eEEeeccCCchHHHHHHHHHHhC-----CCceEEeCCCCC-CchhhhhhCCC-CCcccEEEeCCeecchHHHHHHHHHhh
Q 027498 6 VKLLGYWASPFALRVKWALKLKG-----VHYEYVEENLPN-KSPLLLRYNPV-YKKIPVLVHNGKPLAESLLIIEYIDEA 78 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~g-----i~~~~~~~~~~~-~~~~~~~~~p~-~~~vP~l~~~~~~i~es~~I~~yL~~~ 78 (222)
+++|+.+.||+|.+++-+|...+ ++|+.+.++... ..+++...... ...||.+..||..+.++..|.+++.+.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~~~ 81 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVKEN 81 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHHhc
Confidence 58999999999999999999984 667777776321 12334443331 137999999999999999999999887
Q ss_pred CC
Q 027498 79 WK 80 (222)
Q Consensus 79 ~~ 80 (222)
+.
T Consensus 82 ~~ 83 (86)
T TIGR02183 82 FD 83 (86)
T ss_pred cc
Confidence 54
No 125
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=98.30 E-value=3.9e-06 Score=56.39 Aligned_cols=72 Identities=25% Similarity=0.237 Sum_probs=56.0
Q ss_pred CcceEEeec-----cCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHH
Q 027498 3 EESVKLLGY-----WASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYI 75 (222)
Q Consensus 3 ~~~~~L~~~-----~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL 75 (222)
+.++.+|.. +.||||.+++-+|...|++|+.+.++-. ....++...+.. .++|.+..+|..|.+...+.+..
T Consensus 11 ~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~-~tvP~vfi~g~~iGG~ddl~~l~ 88 (97)
T TIGR00365 11 ENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNW-PTIPQLYVKGEFVGGCDIIMEMY 88 (97)
T ss_pred cCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCC-CCCCEEEECCEEEeChHHHHHHH
Confidence 457889854 8899999999999999999999988533 223345556665 58999999999888877777643
No 126
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=98.21 E-value=8.8e-06 Score=53.91 Aligned_cols=72 Identities=21% Similarity=0.166 Sum_probs=56.9
Q ss_pred CcceEEeec-----cCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHH
Q 027498 3 EESVKLLGY-----WASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYI 75 (222)
Q Consensus 3 ~~~~~L~~~-----~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL 75 (222)
+.++++|.- +.||||.+++-+|...|++|+.+.++.. ....++...+.. .++|.+..+|..|.+...+.+..
T Consensus 7 ~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~-~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 7 ENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNW-PTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred cCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCC-CCCCEEEECCEEEeCHHHHHHHH
Confidence 347888854 6899999999999999999999998643 223445566665 58999999999998888887744
No 127
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=98.05 E-value=4.1e-05 Score=49.68 Aligned_cols=71 Identities=20% Similarity=0.244 Sum_probs=56.9
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCC--ceEEeCCCCCCch----hhhhhCCCCCcccEEEeCCeecchHHHHHHHHHh
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVH--YEYVEENLPNKSP----LLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDE 77 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~--~~~~~~~~~~~~~----~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~ 77 (222)
+++|+.++||+|.+++-+|...+++ |+.+.++...... .+...... .++|.+..+|..+.++..+.+...+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~-~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQ-RTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCC-CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4789999999999999999999999 9898887653332 24455554 5799999999999998888876654
No 128
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.89 E-value=6.5e-05 Score=47.40 Aligned_cols=55 Identities=29% Similarity=0.464 Sum_probs=47.4
Q ss_pred CCchHHHHHHHHHHhCCC---ceEEeCCCCCCchhhhhhCCCCCcccEEEe-CCeecchHHHHHHHH
Q 027498 13 ASPFALRVKWALKLKGVH---YEYVEENLPNKSPLLLRYNPVYKKIPVLVH-NGKPLAESLLIIEYI 75 (222)
Q Consensus 13 ~s~~~~~vr~~L~~~gi~---~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~-~~~~i~es~~I~~yL 75 (222)
.+|-|.++.++|...+.| |+.+..+-. ...|. |++|+|.+ ++..+++-..|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~n~-------~~Spt-g~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSNNP-------WLSPT-GELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcCCC-------CcCCC-CCCCEEEECCCcEEECHHHHHHhh
Confidence 468899999999999999 888777521 25776 89999999 889999999999998
No 129
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=97.64 E-value=0.00029 Score=50.85 Aligned_cols=70 Identities=13% Similarity=0.054 Sum_probs=54.7
Q ss_pred ceEEeecc------CCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCC---CCcccEEEeCCeecchHHHHHHH
Q 027498 5 SVKLLGYW------ASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPV---YKKIPVLVHNGKPLAESLLIIEY 74 (222)
Q Consensus 5 ~~~L~~~~------~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~---~~~vP~l~~~~~~i~es~~I~~y 74 (222)
+++||..+ .+|+|.+++.+|...||+|+++.++.. ...+++.+.... ..++|.+-.+|..|.+...+.+.
T Consensus 1 ~VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~L 80 (147)
T cd03031 1 RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLRL 80 (147)
T ss_pred CEEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHHH
Confidence 47899998 899999999999999999999999765 223445444221 14799999999988888777763
No 130
>PRK10824 glutaredoxin-4; Provisional
Probab=97.61 E-value=0.00037 Score=48.13 Aligned_cols=71 Identities=20% Similarity=0.226 Sum_probs=55.4
Q ss_pred cceEEeec-----cCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHH
Q 027498 4 ESVKLLGY-----WASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYI 75 (222)
Q Consensus 4 ~~~~L~~~-----~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL 75 (222)
.++.+|.- +.||||.+++-+|...|++|+.+.++-. .....+...+.. .+||-+-.+|..|.+...+....
T Consensus 15 ~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~-~TVPQIFI~G~~IGG~ddl~~l~ 91 (115)
T PRK10824 15 NPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANW-PTFPQLWVDGELVGGCDIVIEMY 91 (115)
T ss_pred CCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCC-CCCCeEEECCEEEcChHHHHHHH
Confidence 46788865 5899999999999999999999887643 223445556665 68999999999998887777643
No 131
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.59 E-value=0.00028 Score=59.85 Aligned_cols=68 Identities=9% Similarity=0.117 Sum_probs=52.2
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhh-hh--------CCCCCcccEEEeCCeecchHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLL-RY--------NPVYKKIPVLVHNGKPLAESLLIIE 73 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~-~~--------~p~~~~vP~l~~~~~~i~es~~I~~ 73 (222)
++++|+.+.||+|.+++-+|...||+|+.+.++-.....++. .. ... .+||.+..||..|.+-.....
T Consensus 3 ~V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~~~~~~~~~~~~~~~~~~~~~g~-~tvP~ifi~~~~igGf~~l~~ 79 (410)
T PRK12759 3 EVRIYTKTNCPFCDLAKSWFGANDIPFTQISLDDDVKRAEFYAEVNKNILLVEEHI-RTVPQIFVGDVHIGGYDNLMA 79 (410)
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCCChhHHHHHHHHhhccccccCCC-CccCeEEECCEEEeCchHHHH
Confidence 599999999999999999999999999999997332212221 21 344 579999988888877766655
No 132
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=97.50 E-value=5.3e-05 Score=64.30 Aligned_cols=116 Identities=16% Similarity=0.194 Sum_probs=78.8
Q ss_pred CCeecchHHHHHHHHHhhCC-CCCCCCCCHHHHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHHHHHHHHHHHHHhc
Q 027498 61 NGKPLAESLLIIEYIDEAWK-QNPLLPDDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAKARENLKMLERALE 139 (222)
Q Consensus 61 ~~~~i~es~~I~~yL~~~~~-~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~ 139 (222)
+|..+.++..+..|.+.... .+.+++.+ .++.+++.|++++...-... +...+..++..|.
T Consensus 44 d~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~~~~~~-----------------~s~~~~~ld~~l~ 105 (712)
T KOG1147|consen 44 DGRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSSTFSFDE-----------------ISSSLSELDKFLV 105 (712)
T ss_pred ccccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhhcchHH-----------------HHHHHHHHHhhhh
Confidence 45555556666666554432 23477766 78999999999876521111 6777888888888
Q ss_pred CCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhhh
Q 027498 140 GKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKA 198 (222)
Q Consensus 140 ~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 198 (222)
-..||+|.++|+||+++|+.++.-....+... ..+.+-++.||++-....+....
T Consensus 106 ~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk----~~k~~~~v~Rw~~~~~~~~a~~~ 160 (712)
T KOG1147|consen 106 LRTFLVGNSLSIADFAIWGALHSNGMRQEQLK----AKKDYQNVERWYDLPEFQEAHNK 160 (712)
T ss_pred HHHHhhccchhHHHHHHHHHHhcccchHHHHH----hhCCchhhhhhcCcHhHHHHHHH
Confidence 88999999999999999999887533333211 13467789999994333333333
No 133
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=97.34 E-value=0.0014 Score=44.43 Aligned_cols=72 Identities=19% Similarity=0.233 Sum_probs=58.1
Q ss_pred CcceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchh----hhhhCCCCCcccEEEeCCeecchHHHHHHHH
Q 027498 3 EESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPL----LLRYNPVYKKIPVLVHNGKPLAESLLIIEYI 75 (222)
Q Consensus 3 ~~~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~----~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL 75 (222)
..++.+|.-+.||||.+++-+|...|+++..+++|-.....+ +...... .+||.+-.+|..|.+...+..+=
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~-~tvP~vFI~Gk~iGG~~dl~~lh 88 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQ-RTVPNVFIGGKFIGGASDLMALH 88 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCC-CCCCEEEECCEEEcCHHHHHHHH
Confidence 347899999999999999999999999999999987643333 3334444 58999999999998888877753
No 134
>PTZ00062 glutaredoxin; Provisional
Probab=97.19 E-value=0.0016 Score=49.68 Aligned_cols=70 Identities=23% Similarity=0.157 Sum_probs=53.9
Q ss_pred cceEEeec-----cCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHH
Q 027498 4 ESVKLLGY-----WASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEY 74 (222)
Q Consensus 4 ~~~~L~~~-----~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~y 74 (222)
.++.||.- |.||||++++-+|...||+|+...++-. ...+.+...+.. .++|.+-.+|..|.+...+.+.
T Consensus 113 ~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~-~TvPqVfI~G~~IGG~d~l~~l 188 (204)
T PTZ00062 113 HKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNW-PTYPQLYVNGELIGGHDIIKEL 188 (204)
T ss_pred CCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCC-CCCCeEEECCEEEcChHHHHHH
Confidence 46888844 6899999999999999999999888633 222344555554 5899999999998888777763
No 135
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.15 E-value=0.0021 Score=45.49 Aligned_cols=65 Identities=20% Similarity=0.193 Sum_probs=43.0
Q ss_pred HHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCccc-HHHHHHHHHhcchhhh
Q 027498 123 KAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMP-LLTAWLNNFLEVPVIK 197 (222)
Q Consensus 123 ~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~~ 197 (222)
...+ ++..|..||..+......-| ++|+.|+.+|+.|..+-... + -++| +|.+|+++|.+...+-
T Consensus 59 ~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivk---g------i~~P~~V~~Y~~~~s~~t~V~ 125 (132)
T PF04399_consen 59 ELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVK---G------IQWPPKVRAYMDRMSKATGVP 125 (132)
T ss_dssp HHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCT---T------S---HHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhcc---C------CcCCHHHHHHHHHHHHHcCCC
Confidence 4455 88888888888876555544 89999999999999873321 1 1454 7999999999866553
No 136
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=97.14 E-value=0.002 Score=39.79 Aligned_cols=58 Identities=19% Similarity=0.206 Sum_probs=41.1
Q ss_pred ceEEeeccCCchHHHHHHHHHHh-----CCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecc
Q 027498 5 SVKLLGYWASPFALRVKWALKLK-----GVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLA 66 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~-----gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~ 66 (222)
++++|+.++||+|.+++-+|... +++|..+.++ . .+++...... ..+|++..+|..+.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~--~-~~~l~~~~~i-~~vPti~i~~~~~~ 64 (67)
T cd02973 2 NIEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDAA--E-FPDLADEYGV-MSVPAIVINGKVEF 64 (67)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEcc--c-CHhHHHHcCC-cccCEEEECCEEEE
Confidence 47899999999999999988865 5666666654 2 2334444443 47999998776543
No 137
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.96 E-value=0.0011 Score=45.64 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=30.8
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENL 38 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~ 38 (222)
++||+.+.||+|++++-+|...|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIVE 33 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEecccC
Confidence 589999999999999999999999999998854
No 138
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=96.90 E-value=0.0014 Score=44.57 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=30.7
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENL 38 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~ 38 (222)
+++|+.+.||+|++++-+|...|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYLK 33 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeecc
Confidence 589999999999999999999999999999853
No 139
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=96.80 E-value=0.0054 Score=38.22 Aligned_cols=63 Identities=27% Similarity=0.326 Sum_probs=44.9
Q ss_pred CCCcceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCC-----------CCchhhhhh--CCCCCcccEEE-eCCeecc
Q 027498 1 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLP-----------NKSPLLLRY--NPVYKKIPVLV-HNGKPLA 66 (222)
Q Consensus 1 m~~~~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~-----------~~~~~~~~~--~p~~~~vP~l~-~~~~~i~ 66 (222)
|+. .+||+...||-|.-..-.|+-.++.|+.+.+.-. +..++|-+. |.. --+|+|. ++|.+|.
T Consensus 1 msk--p~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gy-iGIPall~~d~~vVl 77 (85)
T COG4545 1 MSK--PKLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGY-IGIPALLTDDGKVVL 77 (85)
T ss_pred CCC--ceeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCc-ccceEEEeCCCcEEE
Confidence 555 4999999999999999999999999999987432 233333322 222 2389997 5666554
No 140
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.71 E-value=0.0027 Score=45.07 Aligned_cols=32 Identities=13% Similarity=-0.022 Sum_probs=30.6
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
+++|+.+.|++|++++-+|...||+|+.+.+.
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 78999999999999999999999999999885
No 141
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=96.58 E-value=0.004 Score=43.13 Aligned_cols=32 Identities=16% Similarity=0.024 Sum_probs=30.5
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
+++|+.+.|++|++++-+|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 78999999999999999999999999999885
No 142
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=96.51 E-value=0.004 Score=43.26 Aligned_cols=32 Identities=16% Similarity=0.389 Sum_probs=30.1
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
++||+.+.||+|++++-+|...|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 58999999999999999999999999999875
No 143
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.40 E-value=0.013 Score=41.06 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=47.1
Q ss_pred HHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcc-cHHHHHHHHHhcchhh
Q 027498 123 KAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETM-PLLTAWLNNFLEVPVI 196 (222)
Q Consensus 123 ~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~-p~l~~~~~~~~~~p~~ 196 (222)
...+ +...|..++..+..... .++.+|+.|+.+|+.|..+-... +. ++ |+|..|+++|.+...+
T Consensus 60 ~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~vk---gi------~~P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 60 QYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLVK---GL------VFPPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhhc---CC------CCCHHHHHHHHHHHHHhCC
Confidence 4455 88888888888854344 45579999999999998884432 21 44 4799999999986554
No 144
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=96.29 E-value=0.007 Score=41.74 Aligned_cols=33 Identities=15% Similarity=-0.014 Sum_probs=30.8
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
.++||+.+.|+.|++++-+|...|++|+.+.+.
T Consensus 1 ~i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 1 DIIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 379999999999999999999999999999874
No 145
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=96.27 E-value=0.0066 Score=41.29 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=30.2
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
+++|+.+.|+.|++++-.|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 58999999999999999999999999999875
No 146
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=96.10 E-value=0.016 Score=41.09 Aligned_cols=32 Identities=13% Similarity=0.085 Sum_probs=30.6
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
+++|+.+.|+.|++++-.|...||+|+.+.+.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 78999999999999999999999999999885
No 147
>PRK12559 transcriptional regulator Spx; Provisional
Probab=96.07 E-value=0.016 Score=41.14 Aligned_cols=32 Identities=16% Similarity=0.001 Sum_probs=30.5
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
+++|+.+.|+.|++++-+|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~~di~ 33 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTEKNIV 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEEEEee
Confidence 78999999999999999999999999999875
No 148
>PRK10026 arsenate reductase; Provisional
Probab=96.06 E-value=0.011 Score=42.44 Aligned_cols=33 Identities=6% Similarity=-0.064 Sum_probs=30.9
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
.+++|+.+.|.-|++++-.|...|++|+.+.+-
T Consensus 3 ~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 3 NITIYHNPACGTSRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred EEEEEeCCCCHHHHHHHHHHHHCCCCcEEEeee
Confidence 499999999999999999999999999999863
No 149
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=96.00 E-value=0.028 Score=36.20 Aligned_cols=55 Identities=20% Similarity=0.216 Sum_probs=38.6
Q ss_pred ceEEeeccCCchHHHHHHHHHHh--CCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCC
Q 027498 5 SVKLLGYWASPFALRVKWALKLK--GVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNG 62 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~--gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~ 62 (222)
+++||+-+.|+.|..++-+|+.. ..+++...+|+....+ +....-. .+|+|..+|
T Consensus 1 ~l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~-l~~~Y~~--~IPVl~~~~ 57 (81)
T PF05768_consen 1 TLTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDIDEDPE-LFEKYGY--RIPVLHIDG 57 (81)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETTTTHH-HHHHSCT--STSEEEETT
T ss_pred CEEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECCCCHH-HHHHhcC--CCCEEEEcC
Confidence 48999999999999999999964 4555666666665444 4444332 699999766
No 150
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=95.96 E-value=0.054 Score=35.85 Aligned_cols=67 Identities=13% Similarity=0.062 Sum_probs=48.1
Q ss_pred eEEeeccCCch------HHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhC----CCCCcccEEEeCCeecchHHHHHH
Q 027498 6 VKLLGYWASPF------ALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYN----PVYKKIPVLVHNGKPLAESLLIIE 73 (222)
Q Consensus 6 ~~L~~~~~s~~------~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~----p~~~~vP~l~~~~~~i~es~~I~~ 73 (222)
++||....++. |++++.+|..+||+|+++.++.. ...++..... +. .++|-+-.++..+.+...+..
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~~g~-~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNENGK-PLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCCCCC-CCCCEEEECCEEeeCHHHHHH
Confidence 67888776643 88999999999999999999754 2223333332 33 479988888888877655544
No 151
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=95.30 E-value=0.11 Score=34.63 Aligned_cols=72 Identities=21% Similarity=0.250 Sum_probs=51.2
Q ss_pred cceEEe-----eccCCchHHHHHHHHHHhC-CCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHH
Q 027498 4 ESVKLL-----GYWASPFALRVKWALKLKG-VHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYID 76 (222)
Q Consensus 4 ~~~~L~-----~~~~s~~~~~vr~~L~~~g-i~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~ 76 (222)
.++.|| .+|.|+|+.++--+|.+.| ++|..+.|-.. +..+.++..+-. .+.|-|=.+|..|.+|-.|.+-..
T Consensus 15 n~VvLFMKGtp~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d~eiR~~lk~~s~W-PT~PQLyi~GEfvGG~DIv~Em~q 93 (105)
T COG0278 15 NPVVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAYVDVLQDPEIRQGLKEYSNW-PTFPQLYVNGEFVGGCDIVREMYQ 93 (105)
T ss_pred CceEEEecCCCCCCCCCccHHHHHHHHHcCCcceeEEeeccCHHHHhccHhhcCC-CCCceeeECCEEeccHHHHHHHHH
Confidence 367777 5788999999999999999 77777776322 222233333333 478888889999999988877443
No 152
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=95.26 E-value=0.033 Score=39.19 Aligned_cols=33 Identities=21% Similarity=0.064 Sum_probs=30.8
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
.++||+.+.|.-|++++-.|...||+|+.+.+-
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 489999999999999999999999999999874
No 153
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=95.20 E-value=0.11 Score=32.96 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=39.3
Q ss_pred ceEEeeccCCchHHHH----HHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeec
Q 027498 5 SVKLLGYWASPFALRV----KWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPL 65 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~v----r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i 65 (222)
.+.+|. ++||.|..+ .-++++.|+.++.+.++ + .++....+- ..+|++..||..+
T Consensus 2 ~i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~--~-~~~a~~~~v--~~vPti~i~G~~~ 60 (76)
T TIGR00412 2 KIQIYG-TGCANCQMTEKNVKKAVEELGIDAEFEKVT--D-MNEILEAGV--TATPGVAVDGELV 60 (76)
T ss_pred EEEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEEEeC--C-HHHHHHcCC--CcCCEEEECCEEE
Confidence 366765 899999988 66888889998888887 1 233334444 3699998777544
No 154
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=95.06 E-value=0.036 Score=38.11 Aligned_cols=32 Identities=16% Similarity=0.007 Sum_probs=29.8
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
+++|+.+.|+-|++++-.|...|++|+.+.+-
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999999763
No 155
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=95.01 E-value=0.043 Score=38.07 Aligned_cols=33 Identities=12% Similarity=0.210 Sum_probs=30.5
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
.+++|+.+-|.-|++++-.|+..||+|+.+.+.
T Consensus 2 ~itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 2 MITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 389999999999999999999999999988764
No 156
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=94.99 E-value=0.1 Score=35.41 Aligned_cols=68 Identities=16% Similarity=0.271 Sum_probs=46.6
Q ss_pred CCchHHHHHHHHHHh---CCCceEEeCCCCCCchhhhh-hCCCCCcccEEEe-CCe-------------ecchHHHHHHH
Q 027498 13 ASPFALRVKWALKLK---GVHYEYVEENLPNKSPLLLR-YNPVYKKIPVLVH-NGK-------------PLAESLLIIEY 74 (222)
Q Consensus 13 ~s~~~~~vr~~L~~~---gi~~~~~~~~~~~~~~~~~~-~~p~~~~vP~l~~-~~~-------------~i~es~~I~~y 74 (222)
.||.|..+.=+|... .-..+.+.|+.......+.+ +...+..+|+|+- +|. .|.++..|++|
T Consensus 23 ~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~RPR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~~ 102 (112)
T PF11287_consen 23 YCPHCAAIEGLLASFPDLRERLDVRRVDFPRPRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILRY 102 (112)
T ss_pred ECCchHHHHhHHhhChhhhhcccEEEeCCCCchHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHHH
Confidence 477888877777653 33345566666554444443 4444456999983 333 79999999999
Q ss_pred HHhhCC
Q 027498 75 IDEAWK 80 (222)
Q Consensus 75 L~~~~~ 80 (222)
|+++|+
T Consensus 103 La~r~g 108 (112)
T PF11287_consen 103 LAERHG 108 (112)
T ss_pred HHHHcC
Confidence 999986
No 157
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=94.96 E-value=0.12 Score=33.97 Aligned_cols=57 Identities=14% Similarity=0.096 Sum_probs=38.7
Q ss_pred ceEEeeccCCchHHHHHHHHHHh-----CCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeec
Q 027498 5 SVKLLGYWASPFALRVKWALKLK-----GVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPL 65 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~-----gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i 65 (222)
++.+|..++|++|..+.-++... ++.+..+.++ ...+.....+= -.+|+++.||..+
T Consensus 15 ~i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~--~~~e~a~~~~V--~~vPt~vidG~~~ 76 (89)
T cd03026 15 NFETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMIDGA--LFQDEVEERGI--MSVPAIFLNGELF 76 (89)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEEEhH--hCHHHHHHcCC--ccCCEEEECCEEE
Confidence 68899999999999888777665 5666666654 32333333333 3699998777544
No 158
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=94.95 E-value=0.04 Score=38.04 Aligned_cols=32 Identities=19% Similarity=0.005 Sum_probs=29.8
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
+++|+.+.|+-|++++-.|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999998764
No 159
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=94.91 E-value=0.27 Score=31.10 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=38.0
Q ss_pred ceEEeeccCCchHHHHHHHHHH----hCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCe
Q 027498 5 SVKLLGYWASPFALRVKWALKL----KGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGK 63 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~----~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~ 63 (222)
.+++|+.++||+|..+.-.|.. .+..+....+|.....+ ....... ..+|++..+|.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~~-~~~~~~v-~~vPt~~~~g~ 62 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVMENPQ-KAMEYGI-MAVPAIVINGD 62 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCccCHH-HHHHcCC-ccCCEEEECCE
Confidence 4789999999999988877754 34445555666544333 3333343 46999987664
No 160
>PRK10853 putative reductase; Provisional
Probab=94.91 E-value=0.043 Score=38.14 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=30.2
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
+++|+.+.|.-|++++-.|+..|++|+.+.+-
T Consensus 2 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 2 VTLYGIKNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred EEEEcCCCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 78999999999999999999999999999874
No 161
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=94.74 E-value=0.086 Score=30.79 Aligned_cols=54 Identities=26% Similarity=0.237 Sum_probs=37.2
Q ss_pred eEEeeccCCchHHHHHHHHH-----HhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEe
Q 027498 6 VKLLGYWASPFALRVKWALK-----LKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVH 60 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~-----~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~ 60 (222)
+.+|+...|++|++.+..+. ..++.+..+.++............+. ..+|+++.
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~~ 59 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDEDPALEKELKRYGV-GGVPTLVV 59 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChHHhhHHHhCCC-ccccEEEE
Confidence 45778889999999999999 45676666666544322222235565 68999984
No 162
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=93.62 E-value=0.31 Score=36.13 Aligned_cols=37 Identities=30% Similarity=0.130 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhcCC---CcccCCC-CChhHHHHHhHHHHH
Q 027498 127 ARENLKMLERALEGK---PFFGGDK-IGFLDIAVGWIGIWG 163 (222)
Q Consensus 127 ~~~~l~~le~~L~~~---~~l~G~~-~t~aD~~l~~~l~~~ 163 (222)
-.++++.|++.|++. +|+.|+. +|-+||.+++.+..+
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 778899999999887 8999987 999999999987765
No 163
>PHA02125 thioredoxin-like protein
Probab=93.31 E-value=0.32 Score=30.61 Aligned_cols=51 Identities=25% Similarity=0.292 Sum_probs=36.3
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEe
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVH 60 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~ 60 (222)
+.+|+.++|+.|+.+.-.|+. +.+....++... ..++...... ..+|+++.
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~~--~~~~~~~vd~~~-~~~l~~~~~v-~~~PT~~~ 52 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLAN--VEYTYVDVDTDE-GVELTAKHHI-RSLPTLVN 52 (75)
T ss_pred EEEEECCCCHhHHHHHHHHHH--HhheEEeeeCCC-CHHHHHHcCC-ceeCeEEC
Confidence 678999999999998888864 566777776544 3344444444 47999984
No 164
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=91.80 E-value=1.1 Score=28.18 Aligned_cols=56 Identities=23% Similarity=0.308 Sum_probs=36.0
Q ss_pred ceEEeeccCCchHHHHHH----HHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecc
Q 027498 5 SVKLLGYWASPFALRVKW----ALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLA 66 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~----~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~ 66 (222)
++++ ..+.||+|..+.- ++...|+.++.+.+. ..++..+. .. ..+|++..||..++
T Consensus 2 ~I~v-~~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~~---~~~~~~~y-gv-~~vPalvIng~~~~ 61 (76)
T PF13192_consen 2 KIKV-FSPGCPYCPELVQLLKEAAEELGIEVEIIDIE---DFEEIEKY-GV-MSVPALVINGKVVF 61 (76)
T ss_dssp EEEE-ECSSCTTHHHHHHHHHHHHHHTTEEEEEEETT---THHHHHHT-T--SSSSEEEETTEEEE
T ss_pred EEEE-eCCCCCCcHHHHHHHHHHHHhcCCeEEEEEcc---CHHHHHHc-CC-CCCCEEEECCEEEE
Confidence 4677 5677999996655 445568777777652 24444333 33 47999998886543
No 165
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=88.71 E-value=0.61 Score=31.78 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=23.3
Q ss_pred eeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 9 LGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 9 ~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
|+.+.|.-|++++-.|...|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78899999999999999999999999874
No 166
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=86.72 E-value=3.7 Score=27.52 Aligned_cols=69 Identities=16% Similarity=0.077 Sum_probs=39.1
Q ss_pred ceEEeeccCCch------HHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhC------CC--CCcccEEEeCCeecchHH
Q 027498 5 SVKLLGYWASPF------ALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYN------PV--YKKIPVLVHNGKPLAESL 69 (222)
Q Consensus 5 ~~~L~~~~~s~~------~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~------p~--~~~vP~l~~~~~~i~es~ 69 (222)
.+++|....++. ++++..+|..++|+|+.+.+... ....+..... |. ..-.|-+..|+.-+.+-.
T Consensus 2 ~I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~Gdye 81 (99)
T PF04908_consen 2 VIKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMDEEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCGDYE 81 (99)
T ss_dssp SEEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEEEHH
T ss_pred EEEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEeeHH
Confidence 478888776654 67899999999999999998754 1122233222 11 122467777776666655
Q ss_pred HHHH
Q 027498 70 LIIE 73 (222)
Q Consensus 70 ~I~~ 73 (222)
.+.+
T Consensus 82 ~f~e 85 (99)
T PF04908_consen 82 DFEE 85 (99)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 167
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=76.84 E-value=1.7 Score=33.68 Aligned_cols=59 Identities=15% Similarity=0.152 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHHHHHHHhcccccCCCcccHHHHHHHHHhcchhhh
Q 027498 128 RENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIK 197 (222)
Q Consensus 128 ~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 197 (222)
.+.+..++..|.+.+|..|..++-+|+.++..+.-- .....+++..+|++.+.+.-...
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~e-----------p~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGVE-----------PQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcccC-----------cchhhhhHHHHHHHHHHHHHHHH
Confidence 456888999999999999999999999998765321 11336788899998888754443
No 168
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=75.56 E-value=15 Score=25.50 Aligned_cols=32 Identities=13% Similarity=0.270 Sum_probs=21.8
Q ss_pred eEEeeccCCchHHHHHHHHH----HhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKWALK----LKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~----~~gi~~~~~~~~ 37 (222)
+..++.++||+|+.+.=.|. ..++++-.+.++
T Consensus 27 iv~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd 62 (122)
T TIGR01295 27 TFFIGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSE 62 (122)
T ss_pred EEEEECCCChhHHHHhHHHHHHHHhcCCcEEEEECC
Confidence 55578889999998554443 345666666665
No 169
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=75.49 E-value=11 Score=29.25 Aligned_cols=70 Identities=16% Similarity=0.121 Sum_probs=50.6
Q ss_pred ceEEe-----eccCCchHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHH
Q 027498 5 SVKLL-----GYWASPFALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYI 75 (222)
Q Consensus 5 ~~~L~-----~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL 75 (222)
+++|| ..|-|++++.+--+|...|++|....|--. .-..-+++.+-. .+.|=|=.+|..+.+...|.+-+
T Consensus 140 ~v~lFmKG~p~~P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fSdW-PTfPQlyI~GEFiGGlDIl~~m~ 215 (227)
T KOG0911|consen 140 PVMLFMKGTPEEPKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFSDW-PTFPQLYVKGEFIGGLDILKEMH 215 (227)
T ss_pred eEEEEecCCCCcccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhcCC-CCccceeECCEeccCcHHHHHHh
Confidence 46666 467899999999999999999999888432 112223344443 57888888998888877776633
No 170
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=73.75 E-value=13 Score=26.50 Aligned_cols=72 Identities=17% Similarity=0.051 Sum_probs=49.2
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhh-hC-C-CCCcccEEEeCCeec---chHHHHHHHHHhh
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLR-YN-P-VYKKIPVLVHNGKPL---AESLLIIEYIDEA 78 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~-~~-p-~~~~vP~l~~~~~~i---~es~~I~~yL~~~ 78 (222)
++..|+.|.|++|..-.=.|+.+|.....+..+-.. .++. .+ | ..+.-=+.+.+|..| ..-.+|.+.|++.
T Consensus 27 ~~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~d~~---alK~~~gIp~e~~SCHT~VI~Gy~vEGHVPa~aI~~ll~~~ 103 (149)
T COG3019 27 EMVVYKSPNCGCCDEWAQHMKANGFEVKVVETDDFL---ALKRRLGIPYEMQSCHTAVINGYYVEGHVPAEAIARLLAEK 103 (149)
T ss_pred eEEEEeCCCCccHHHHHHHHHhCCcEEEEeecCcHH---HHHHhcCCChhhccccEEEEcCEEEeccCCHHHHHHHHhCC
Confidence 689999999999998888899999988888776331 1111 11 1 002233555677554 5678899999887
Q ss_pred C
Q 027498 79 W 79 (222)
Q Consensus 79 ~ 79 (222)
.
T Consensus 104 p 104 (149)
T COG3019 104 P 104 (149)
T ss_pred C
Confidence 5
No 171
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=72.62 E-value=21 Score=24.24 Aligned_cols=57 Identities=18% Similarity=0.213 Sum_probs=33.9
Q ss_pred eEEeeccCCchHHHHHHHHHH-----hCCCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCeecc
Q 027498 6 VKLLGYWASPFALRVKWALKL-----KGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGKPLA 66 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~-----~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~~i~ 66 (222)
+..++.++|+-|+.+.-.+.. .++. ...+|... ..++...... ..+|+++ .+|..+.
T Consensus 26 vV~f~a~~c~~C~~~~p~l~~la~~~~~i~--f~~Vd~~~-~~~l~~~~~v-~~vPt~l~fk~G~~v~ 89 (113)
T cd02989 26 VCHFYHPEFFRCKIMDKHLEILAKKHLETK--FIKVNAEK-APFLVEKLNI-KVLPTVILFKNGKTVD 89 (113)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHcCCCE--EEEEEccc-CHHHHHHCCC-ccCCEEEEEECCEEEE
Confidence 345566889999987766654 2443 44444333 3344444444 5799998 4775543
No 172
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=72.30 E-value=22 Score=23.09 Aligned_cols=57 Identities=11% Similarity=0.014 Sum_probs=31.6
Q ss_pred eEEeeccCCchHHHHHHHHHH----hCCCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCee
Q 027498 6 VKLLGYWASPFALRVKWALKL----KGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGKP 64 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~----~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~~ 64 (222)
+.+|+.++|+.|+...-.+.. .+-.+....+|... .+++....-. ..+|++. .+|..
T Consensus 17 lv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~-~~~l~~~~~v-~~vPt~~i~~~g~~ 79 (97)
T cd02949 17 LVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDIDE-DQEIAEAAGI-MGTPTVQFFKDKEL 79 (97)
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCC-CHHHHHHCCC-eeccEEEEEECCeE
Confidence 445666789999987766654 11123444555433 3333333333 4699886 45544
No 173
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=70.76 E-value=3.6 Score=28.56 Aligned_cols=27 Identities=26% Similarity=0.447 Sum_probs=13.5
Q ss_pred cccEEEe--CCeecchHHHHHHHHHhhCC
Q 027498 54 KIPVLVH--NGKPLAESLLIIEYIDEAWK 80 (222)
Q Consensus 54 ~vP~l~~--~~~~i~es~~I~~yL~~~~~ 80 (222)
.-|.|.+ +|..++|+.||++|+..-|.
T Consensus 35 ~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 35 SGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp -S--EEE-S--S----HHHHHHHHTT--T
T ss_pred ccceeeecCCceEEecccHHHHHHHhhcC
Confidence 4588854 67889999999999998764
No 174
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=68.58 E-value=25 Score=21.72 Aligned_cols=54 Identities=22% Similarity=0.170 Sum_probs=33.3
Q ss_pred eEEeeccCCchHHHHHHHHHH-----hCCCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCe
Q 027498 6 VKLLGYWASPFALRVKWALKL-----KGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGK 63 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~-----~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~ 63 (222)
+..++.++|+.|+...-.+.. .++.+-.+..+ . ...+...... ..+|++. .+|.
T Consensus 14 ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~i~~~--~-~~~~~~~~~v-~~~P~~~~~~~g~ 74 (93)
T cd02947 14 VVDFWAPWCGPCKAIAPVLEELAEEYPKVKFVKVDVD--E-NPELAEEYGV-RSIPTFLFFKNGK 74 (93)
T ss_pred EEEEECCCChhHHHhhHHHHHHHHHCCCceEEEEECC--C-ChhHHHhcCc-ccccEEEEEECCE
Confidence 556677889999988777766 56665555554 2 2233333333 3689886 3554
No 175
>PF11417 Inhibitor_G39P: Loader and inhibitor of phage G40P; InterPro: IPR024424 G39P inhibits the initiation of DNA replication by blocking G40P replicative helicase. G39P has a bipartite stricture consisting of a folded N-terminal domain and an unfolded C-terminal domain. The C-terminal is essential for helicase interaction [].; PDB: 1NO1_B.
Probab=67.96 E-value=27 Score=21.81 Aligned_cols=64 Identities=17% Similarity=0.350 Sum_probs=36.4
Q ss_pred chHHHHHHHHHhhCCC--CCCCCCCHHHHHHHHHHHHHHhcccchhhhhhhcCCcHHHHHHHHHHHHHHHHHHHhcCCCc
Q 027498 66 AESLLIIEYIDEAWKQ--NPLLPDDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAKARENLKMLERALEGKPF 143 (222)
Q Consensus 66 ~es~~I~~yL~~~~~~--~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~ 143 (222)
.|..-|+.++..-||. ..+.+.+ .+..++.|.....+.= ...+...+.+++..++|
T Consensus 4 ~E~~~ll~~I~~aYP~~~~~f~~~~--~k~~v~~W~~~L~d~~--------------------ye~v~~al~~~i~~~kf 61 (71)
T PF11417_consen 4 EETAKLLKLIKAAYPQWAGNFKPTD--SKETVDLWYDMLKDYD--------------------YEIVMKALKKHIATNKF 61 (71)
T ss_dssp HHHHHHHHHHHHHST---TT---ST--HHHHHHHHHHHHTTS---------------------HHHHHHHHHHHHHH-SS
T ss_pred HHHHHHHHHHHHHCCcchhccchhh--HHHHHHHHHHHHHhCC--------------------HHHHHHHHHHHHHhCCC
Confidence 3677899999999993 2355554 4678888988876642 23334445555555566
Q ss_pred ccCCCCChhHHH
Q 027498 144 FGGDKIGFLDIA 155 (222)
Q Consensus 144 l~G~~~t~aD~~ 155 (222)
- ||+||+.
T Consensus 62 P----Psiaeii 69 (71)
T PF11417_consen 62 P----PSIAEII 69 (71)
T ss_dssp -------GGGG-
T ss_pred C----cCHHHHh
Confidence 4 7888763
No 176
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=66.86 E-value=15 Score=32.68 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=36.3
Q ss_pred ceEEeeccCCchHHHHHH----HHHHh-CCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCCee
Q 027498 5 SVKLLGYWASPFALRVKW----ALKLK-GVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKP 64 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~----~L~~~-gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~ 64 (222)
.+++|..+.||||-.+.- +..+. +|..+.+.+... ++..+.... ..||.+..||..
T Consensus 479 ~i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~~---~~~~~~~~v-~~vP~~~i~~~~ 539 (555)
T TIGR03143 479 NIKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVSHF---PDLKDEYGI-MSVPAIVVDDQQ 539 (555)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECccc---HHHHHhCCc-eecCEEEECCEE
Confidence 478888999999986554 44444 687777776532 333323232 369999977754
No 177
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=66.54 E-value=18 Score=24.61 Aligned_cols=51 Identities=10% Similarity=0.094 Sum_probs=31.2
Q ss_pred eEEe-eccCCchHHHHHHHHHHhC-----CCceEEeCCCCCCchhhhhhCCCCCcccEEEe
Q 027498 6 VKLL-GYWASPFALRVKWALKLKG-----VHYEYVEENLPNKSPLLLRYNPVYKKIPVLVH 60 (222)
Q Consensus 6 ~~L~-~~~~s~~~~~vr~~L~~~g-----i~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~ 60 (222)
+.++ +-++||+|+.++-++.... +.+..+.++ . .+++...... ..+|++..
T Consensus 25 vvv~f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d--~-~~~l~~~~~v-~~vPt~~i 81 (113)
T cd02975 25 LVVFSSKEGCQYCEVTKQLLEELSELSDKLKLEIYDFD--E-DKEKAEKYGV-ERVPTTIF 81 (113)
T ss_pred EEEEeCCCCCCChHHHHHHHHHHHHhcCceEEEEEeCC--c-CHHHHHHcCC-CcCCEEEE
Confidence 5555 4578999998877776543 334444443 2 3455544444 57999973
No 178
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=65.87 E-value=34 Score=26.21 Aligned_cols=54 Identities=11% Similarity=0.031 Sum_probs=32.5
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCC---CceEEeCCCCCCchhhhhhCCCCCcccEEEe
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGV---HYEYVEENLPNKSPLLLRYNPVYKKIPVLVH 60 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi---~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~ 60 (222)
.+++|+.++||+|..+.-++...-- ......+|... .++....... ..+|++..
T Consensus 136 ~I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~-~~~~~~~~~V-~~vPtl~i 192 (215)
T TIGR02187 136 RIEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEANE-NPDLAEKYGV-MSVPKIVI 192 (215)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCCC-CHHHHHHhCC-ccCCEEEE
Confidence 4667889999999988877765421 12223344443 3333333333 46999984
No 179
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=64.72 E-value=5.1 Score=35.25 Aligned_cols=72 Identities=11% Similarity=0.027 Sum_probs=41.4
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCC---ceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecch----HHHHHHHHHh
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVH---YEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAE----SLLIIEYIDE 77 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~---~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~e----s~~I~~yL~~ 77 (222)
.+++|..+.||||-.+.-++....+. .+...+|....++.....+- ..||.+..|+..+.+ -..+++.+.+
T Consensus 120 ~i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~~~~~~~~~~~v--~~VP~~~i~~~~~~~g~~~~~~~~~~l~~ 197 (515)
T TIGR03140 120 HFETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDGALFQDEVEALGI--QGVPAVFLNGEEFHNGRMDLAELLEKLEE 197 (515)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEchhCHHHHHhcCC--cccCEEEECCcEEEecCCCHHHHHHHHhh
Confidence 58899999999999877666554332 22333444343333333333 379999877654433 2344555544
Q ss_pred h
Q 027498 78 A 78 (222)
Q Consensus 78 ~ 78 (222)
.
T Consensus 198 ~ 198 (515)
T TIGR03140 198 T 198 (515)
T ss_pred c
Confidence 3
No 180
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=64.28 E-value=6.3 Score=34.69 Aligned_cols=72 Identities=14% Similarity=0.041 Sum_probs=41.6
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCC---ceEEeCCCCCCchhhhhhCCCCCcccEEEeCCeecch----HHHHHHHHHh
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVH---YEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAE----SLLIIEYIDE 77 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~---~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~i~e----s~~I~~yL~~ 77 (222)
.+++|..+.||||-.+.-++...-+. .+...++.... +++.+.... ..||.+..|+..+.+ -..+++.+.+
T Consensus 119 ~i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~~~~-~~~~~~~~v-~~VP~~~i~~~~~~~g~~~~~~~~~~~~~ 196 (517)
T PRK15317 119 HFETYVSLSCHNCPDVVQALNLMAVLNPNITHTMIDGALF-QDEVEARNI-MAVPTVFLNGEEFGQGRMTLEEILAKLDT 196 (517)
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEEchhC-HhHHHhcCC-cccCEEEECCcEEEecCCCHHHHHHHHhc
Confidence 58899999999999766665544222 22333343333 333333333 479999877654432 3356666654
Q ss_pred h
Q 027498 78 A 78 (222)
Q Consensus 78 ~ 78 (222)
.
T Consensus 197 ~ 197 (517)
T PRK15317 197 G 197 (517)
T ss_pred c
Confidence 3
No 181
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=62.90 E-value=24 Score=28.26 Aligned_cols=69 Identities=10% Similarity=-0.006 Sum_probs=47.2
Q ss_pred ceEEeeccCCc------hHHHHHHHHHHhCCCceEEeCCCC-CCchhhhhhCC---CCCcccEEEeCCeecchHHHHHH
Q 027498 5 SVKLLGYWASP------FALRVKWALKLKGVHYEYVEENLP-NKSPLLLRYNP---VYKKIPVLVHNGKPLAESLLIIE 73 (222)
Q Consensus 5 ~~~L~~~~~s~------~~~~vr~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p---~~~~vP~l~~~~~~i~es~~I~~ 73 (222)
.+.+|.....+ -|..||.+|+-.+|.|+++.+.+. ...+++..+-. ..-.+|.+-.+|.-|.+-..|++
T Consensus 132 ~VVvY~TsLRgvRkTfE~C~~VR~ilesf~V~v~ERDVSMd~~fr~EL~~~lg~~~~~~~LPrVFV~GryIGgaeeV~~ 210 (281)
T KOG2824|consen 132 RVVVYTTSLRGVRKTFEDCNAVRAILESFRVKVDERDVSMDSEFREELQELLGEDEKAVSLPRVFVKGRYIGGAEEVVR 210 (281)
T ss_pred eEEEEEcccchhhhhHHHHHHHHHHHHhCceEEEEecccccHHHHHHHHHHHhcccccCccCeEEEccEEeccHHHhhh
Confidence 56777665432 288999999999999999999887 22344332211 12368966678877777666665
No 182
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=58.65 E-value=46 Score=21.34 Aligned_cols=70 Identities=20% Similarity=0.231 Sum_probs=40.1
Q ss_pred eEEeeccCCchHHHHHHHHHHh----CCCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCeec------chHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALKLK----GVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGKPL------AESLLIIE 73 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~----gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~~i------~es~~I~~ 73 (222)
+..++.++|+.|+...=.+... +-++....+|... ...+...... ..+|++. .+|..+ .+...|.+
T Consensus 21 vv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~-~~~l~~~~~v-~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~ 98 (103)
T PF00085_consen 21 VVYFYAPWCPPCKAFKPILEKLAKEYKDNVKFAKVDCDE-NKELCKKYGV-KSVPTIIFFKNGKEVKRYNGPRNAESLIE 98 (103)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHHHTTTTSEEEEEETTT-SHHHHHHTTC-SSSSEEEEEETTEEEEEEESSSSHHHHHH
T ss_pred EEEEeCCCCCccccccceecccccccccccccchhhhhc-cchhhhccCC-CCCCEEEEEECCcEEEEEECCCCHHHHHH
Confidence 5566778899999877554332 2145555555543 3344444344 4799997 465332 34455666
Q ss_pred HHHh
Q 027498 74 YIDE 77 (222)
Q Consensus 74 yL~~ 77 (222)
+|.+
T Consensus 99 ~i~~ 102 (103)
T PF00085_consen 99 FIEK 102 (103)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 6654
No 183
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=57.97 E-value=37 Score=22.27 Aligned_cols=52 Identities=12% Similarity=-0.063 Sum_probs=28.6
Q ss_pred eEEeeccCCchHHHHHHHH--------HHhCCCceEEeCCCCCC---chhhhhhCCCCCcccEEE
Q 027498 6 VKLLGYWASPFALRVKWAL--------KLKGVHYEYVEENLPNK---SPLLLRYNPVYKKIPVLV 59 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L--------~~~gi~~~~~~~~~~~~---~~~~~~~~p~~~~vP~l~ 59 (222)
+..|+.++|++|++..-.+ ...+ .+....++.... ..++...... ..+|++.
T Consensus 15 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i-~~~Pti~ 77 (104)
T cd02953 15 FVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGV-FGPPTYL 77 (104)
T ss_pred EEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCC-CCCCEEE
Confidence 4456778889998765332 1222 455555554422 2344443343 4699886
No 184
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=57.42 E-value=48 Score=21.18 Aligned_cols=57 Identities=9% Similarity=0.008 Sum_probs=33.4
Q ss_pred eEEeeccCCchHHHHHHHHHHh----CCCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCee
Q 027498 6 VKLLGYWASPFALRVKWALKLK----GVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGKP 64 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~----gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~~ 64 (222)
+..++.++|+.|++..-.|... .-.+....++.....+-....+. ..+|++. .+|..
T Consensus 18 ~v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~~~~~~~~~~~i--~~~Pt~~~~~~g~~ 80 (97)
T cd02984 18 VLHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEAEELPEISEKFEI--TAVPTFVFFRNGTI 80 (97)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEccccCHHHHHhcCC--ccccEEEEEECCEE
Confidence 3456677888899876666542 33455556665443333334454 3699886 46643
No 185
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=52.81 E-value=30 Score=25.11 Aligned_cols=33 Identities=24% Similarity=0.225 Sum_probs=24.5
Q ss_pred CchHHHHHHHHHHhCCCceEEeCCCCCCchhhh
Q 027498 14 SPFALRVKWALKLKGVHYEYVEENLPNKSPLLL 46 (222)
Q Consensus 14 s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~ 46 (222)
-+.+++++-.|++.|++|+.+........+.+.
T Consensus 13 ~~~~~~a~~~L~~~gi~~~~~V~saHR~p~~l~ 45 (150)
T PF00731_consen 13 LPIAEEAAKTLEEFGIPYEVRVASAHRTPERLL 45 (150)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEE--TTTSHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHH
Confidence 488999999999999999998888775555443
No 186
>PF01323 DSBA: DSBA-like thioredoxin domain; InterPro: IPR001853 DSBA is a sub-family of the Thioredoxin family []. The efficient and correct folding of bacterial disulphide bonded proteins in vivo is dependent upon a class of periplasmic oxidoreductase proteins called DsbA, after the Escherichia coli enzyme. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyses disulphide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilising active-site interactions in the reduced form. DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulphide at the active site []. In the pathogenic bacterium Vibrio cholerae, the DsbA homologue (TcpG) is responsible for the folding, maturation and secretion of virulence factors. While the overall architecture of TcpG and DsbA is similar and the surface features are retained in TcpG, there are significant differences. For example, the kinked active site helix results from a three-residue loop in DsbA, but is caused by a proline in TcpG (making TcpG more similar to thioredoxin in this respect). Furthermore, the proposed peptide binding groove of TcpG is substantially shortened compared with that of DsbA due to a six-residue deletion. Also, the hydrophobic pocket of TcpG is more shallow and the acidic patch is much less extensive than that of E. coli DsbA [].; GO: 0015035 protein disulfide oxidoreductase activity; PDB: 3GL5_A 3DKS_D 3RPP_C 3RPN_B 1YZX_A 3L9V_C 2IMD_A 2IME_A 2IMF_A 2B3S_B ....
Probab=50.41 E-value=29 Score=25.66 Aligned_cols=36 Identities=11% Similarity=0.116 Sum_probs=26.9
Q ss_pred ceEEeeccCCchHHH----HHHHHHHh-CCCceEEeCCCCC
Q 027498 5 SVKLLGYWASPFALR----VKWALKLK-GVHYEYVEENLPN 40 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~----vr~~L~~~-gi~~~~~~~~~~~ 40 (222)
++++|+...||||.. ++-+++.. ++.++.+++.+..
T Consensus 1 ~i~~~~D~~Cp~cy~~~~~l~~l~~~~~~~~i~~~p~~l~~ 41 (193)
T PF01323_consen 1 TIEFFFDFICPWCYLASPRLRKLRAEYPDVEIEWRPFPLRP 41 (193)
T ss_dssp EEEEEEBTTBHHHHHHHHHHHHHHHHHTTCEEEEEEESSST
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhcCCcEEEecccccc
Confidence 478999999999874 44455555 8888888887553
No 187
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=48.29 E-value=77 Score=24.22 Aligned_cols=53 Identities=9% Similarity=0.119 Sum_probs=32.0
Q ss_pred ceEEeec---cCCchHHHHHHHHHHh-----CCCceEEeCCCCCCchhhhhhCCCCCcccEEE
Q 027498 5 SVKLLGY---WASPFALRVKWALKLK-----GVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV 59 (222)
Q Consensus 5 ~~~L~~~---~~s~~~~~vr~~L~~~-----gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~ 59 (222)
.+.+|+. ++||.|+.+.=++... ++.+..+.++... ..++....-. ..+|++.
T Consensus 22 ~i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~-~~~l~~~~~V-~~~Pt~~ 82 (215)
T TIGR02187 22 EIVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTPE-DKEEAEKYGV-ERVPTTI 82 (215)
T ss_pred EEEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCcc-cHHHHHHcCC-CccCEEE
Confidence 4667777 7899999877766554 2334445555433 3333333333 4699997
No 188
>COG3011 Predicted thiol-disulfide oxidoreductase [General function prediction only]
Probab=47.95 E-value=1e+02 Score=22.06 Aligned_cols=78 Identities=15% Similarity=0.025 Sum_probs=44.4
Q ss_pred CCCcceEEeeccCCchHHHHHHHHHHhCCC--ceEEeCCCCCCchhhhhhCCCCCccc---EEEeCCeecchHHHHHHHH
Q 027498 1 MAEESVKLLGYWASPFALRVKWALKLKGVH--YEYVEENLPNKSPLLLRYNPVYKKIP---VLVHNGKPLAESLLIIEYI 75 (222)
Q Consensus 1 m~~~~~~L~~~~~s~~~~~vr~~L~~~gi~--~~~~~~~~~~~~~~~~~~~p~~~~vP---~l~~~~~~i~es~~I~~yL 75 (222)
|..+.+++++.-.|+.|-.---+|....-. ++...+.... ........+.....+ .++.+|..+.+|.|+++-+
T Consensus 5 ~~~p~~vvlyDG~C~lC~~~vrfLi~~D~~~~i~f~~~q~e~-g~~~l~~~~l~~~~~~s~~~~~~g~~~~~sdA~~~i~ 83 (137)
T COG3011 5 MKKPDLVVLYDGVCPLCDGWVRFLIRRDQGGRIRFAALQSEP-GQALLEAAGLDPEDVDSVLLVEAGQLLVGSDAAIRIL 83 (137)
T ss_pred CCCCCEEEEECCcchhHHHHHHHHHHhccCCcEEEEeccCch-hhhHHhhcCCChhhhheeeEecCCceEeccHHHHHHH
Confidence 445567788888899988655555554333 3444333221 222233322201112 2235889999999999977
Q ss_pred HhhC
Q 027498 76 DEAW 79 (222)
Q Consensus 76 ~~~~ 79 (222)
...-
T Consensus 84 ~~L~ 87 (137)
T COG3011 84 RLLP 87 (137)
T ss_pred HHCC
Confidence 7653
No 189
>cd03021 DsbA_GSTK DsbA family, Glutathione (GSH) S-transferase Kappa (GSTK) subfamily; GSTK is a member of the GST family of enzymes which catalyzes the transfer of the thiol of GSH to electrophilic substrates. It is specifically located in the mitochondria and peroxisomes, unlike other members of the canonical GST family, which are mainly cytosolic. The biological substrates of GSTK are not yet known. It is presumed to have a protective role during respiration when large amounts of reactive oxygen species are generated. GSTK has the same general fold as DsbA, consisting of a thioredoxin domain interrupted by an alpha-helical domain and its biological unit is a homodimer. GSTK is closely related to the bacterial enzyme, 2-hydroxychromene-2-carboxylate (HCCA) isomerase. It shows little sequence similarity to the other members of the GST family.
Probab=47.15 E-value=31 Score=26.21 Aligned_cols=35 Identities=20% Similarity=0.140 Sum_probs=25.3
Q ss_pred cceEEeeccCCchHHH----HHHHHHHhCCCceEEeCCC
Q 027498 4 ESVKLLGYWASPFALR----VKWALKLKGVHYEYVEENL 38 (222)
Q Consensus 4 ~~~~L~~~~~s~~~~~----vr~~L~~~gi~~~~~~~~~ 38 (222)
+++.+|+...||||-- ++-++...+++.+.+++.+
T Consensus 1 ~~Id~~~D~vcPwcylg~~~l~~~~~~~~v~i~~~P~~L 39 (209)
T cd03021 1 PKIELYYDVVSPYSYLAFEVLCRYQTAWNVDITYVPVFL 39 (209)
T ss_pred CceEEEEeCCChHHHHHHHHHHHHHHHhCCeEEEEeeeh
Confidence 4688999999999874 3444555677777777653
No 190
>PTZ00051 thioredoxin; Provisional
Probab=47.05 E-value=75 Score=20.32 Aligned_cols=57 Identities=9% Similarity=-0.009 Sum_probs=29.9
Q ss_pred eEEeeccCCchHHHHHHHHHHh---CCCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCee
Q 027498 6 VKLLGYWASPFALRVKWALKLK---GVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGKP 64 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~---gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~~ 64 (222)
+..++.++|+.|+...-.+... .-.+....++... ...+...... ..+|+++ .+|..
T Consensus 22 li~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~~-~~~~~~~~~v-~~~Pt~~~~~~g~~ 83 (98)
T PTZ00051 22 IVDFYAEWCGPCKRIAPFYEECSKEYTKMVFVKVDVDE-LSEVAEKENI-TSMPTFKVFKNGSV 83 (98)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHcCCcEEEEEECcc-hHHHHHHCCC-ceeeEEEEEeCCeE
Confidence 3456777888888765555442 1122333444332 3334433333 4699887 35543
No 191
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=45.64 E-value=20 Score=24.39 Aligned_cols=26 Identities=12% Similarity=0.314 Sum_probs=21.6
Q ss_pred ccEEE-eCCeecchHHHHHHHHHhhCC
Q 027498 55 IPVLV-HNGKPLAESLLIIEYIDEAWK 80 (222)
Q Consensus 55 vP~l~-~~~~~i~es~~I~~yL~~~~~ 80 (222)
.|.+. .+|.++.+|..|+++++..+.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 35554 689999999999999998875
No 192
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=44.70 E-value=27 Score=21.02 Aligned_cols=31 Identities=23% Similarity=0.009 Sum_probs=19.9
Q ss_pred EEeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 7 KLLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 7 ~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
+||.+....-++.++-+|+..||++....-.
T Consensus 2 ~l~~~~~~~ea~~i~~~L~~~gI~~~v~~~~ 32 (67)
T PF09413_consen 2 KLYTAGDPIEAELIKGLLEENGIPAFVKNEH 32 (67)
T ss_dssp EEEEE--HHHHHHHHHHHHHTT--EE--S--
T ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEECCc
Confidence 6777776667999999999999998877654
No 193
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=44.48 E-value=86 Score=21.91 Aligned_cols=68 Identities=18% Similarity=0.137 Sum_probs=40.7
Q ss_pred ccCCchHHH----HHHHHHHhCCCceEEeCCCCCCchhhhhhCCC-----C-CcccEEEe-C--CeecchHHHHHHHHHh
Q 027498 11 YWASPFALR----VKWALKLKGVHYEYVEENLPNKSPLLLRYNPV-----Y-KKIPVLVH-N--GKPLAESLLIIEYIDE 77 (222)
Q Consensus 11 ~~~s~~~~~----vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~-----~-~~vP~l~~-~--~~~i~es~~I~~yL~~ 77 (222)
-++||.|.+ +.=+|.+.+-....+.++..+++-|-..-||+ . .-||+|+. + +.-+.+...-...|.+
T Consensus 42 qSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~Wk~p~n~FR~d~~~lt~vPTLlrw~~~~~rL~~~q~~~~~Lve 121 (128)
T KOG3425|consen 42 QSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYWKDPANPFRKDPGILTAVPTLLRWKRQPQRLDGLQCLNDHLVE 121 (128)
T ss_pred CcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcccCCCCccccCCCceeecceeeEEcCccccchHhHhhHHHHHH
Confidence 457999986 55667777777777777666544443233332 1 24899984 3 3445666655566655
Q ss_pred h
Q 027498 78 A 78 (222)
Q Consensus 78 ~ 78 (222)
.
T Consensus 122 ~ 122 (128)
T KOG3425|consen 122 M 122 (128)
T ss_pred H
Confidence 4
No 194
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=43.61 E-value=98 Score=20.69 Aligned_cols=56 Identities=14% Similarity=0.080 Sum_probs=27.9
Q ss_pred eEEeeccCCchHHHHHHHH-----HHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCe
Q 027498 6 VKLLGYWASPFALRVKWAL-----KLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGK 63 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L-----~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~ 63 (222)
+..++.++|+.|+...-.+ .+.+.......++... ...+...... ..+|++. .+|.
T Consensus 28 lV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~-~~~l~~~~~V-~~~Pt~~i~~~g~ 90 (111)
T cd02963 28 LIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGH-ERRLARKLGA-HSVPAIVGIINGQ 90 (111)
T ss_pred EEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEeccc-cHHHHHHcCC-ccCCEEEEEECCE
Confidence 3445667788887554333 2222233344444332 2233333333 4799887 4554
No 195
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=39.31 E-value=43 Score=25.17 Aligned_cols=22 Identities=18% Similarity=0.200 Sum_probs=18.1
Q ss_pred ceEEeeccCCchHHHHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKL 26 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~ 26 (222)
.+.+|..+.||||++..-.+..
T Consensus 80 ~i~~f~D~~Cp~C~~~~~~l~~ 101 (197)
T cd03020 80 VVYVFTDPDCPYCRKLEKELKP 101 (197)
T ss_pred EEEEEECCCCccHHHHHHHHhh
Confidence 4667888899999999887764
No 196
>PRK09266 hypothetical protein; Provisional
Probab=38.49 E-value=53 Score=26.06 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=39.4
Q ss_pred HHHHhCCCceEEeCCCC--CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhhCC
Q 027498 23 ALKLKGVHYEYVEENLP--NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWK 80 (222)
Q Consensus 23 ~L~~~gi~~~~~~~~~~--~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~~~ 80 (222)
.+...|+++++..+... ...++..-.|...|-+|+...++..+.+...|.+.|.+.|.
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfltnSl~gi~pV~~i~~~~~~~~~~~~~~l~~~~~ 259 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFACNAWRGQRAVSAIDDVALPDSHALLELLRRAYE 259 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhhhcCccceEEEEEECCEECCCCchHHHHHHHHHH
Confidence 45566999999988765 22334444555447899999888777655677777777653
No 197
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=38.04 E-value=1.1e+02 Score=20.45 Aligned_cols=69 Identities=10% Similarity=0.151 Sum_probs=39.3
Q ss_pred EeeccCCchHHHHHHHHHHhCC--CceEEeCCCCCCchh---hhhhCCC--CCcccEEEeCCe-ecchHHHHHHHHHhh
Q 027498 8 LLGYWASPFALRVKWALKLKGV--HYEYVEENLPNKSPL---LLRYNPV--YKKIPVLVHNGK-PLAESLLIIEYIDEA 78 (222)
Q Consensus 8 L~~~~~s~~~~~vr~~L~~~gi--~~~~~~~~~~~~~~~---~~~~~p~--~~~vP~l~~~~~-~i~es~~I~~yL~~~ 78 (222)
|+|...||.|.+..-.+...+. .++.+.+... ...+ ...+++. ...+-+ ..+|. ...++.|+.+-+...
T Consensus 1 v~YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-~~~g~~~~~G~~A~~~l~~~~ 77 (114)
T PF04134_consen 1 VFYDGDCPLCRREVRFLRRRDRGGRLRFVDIQSE-PDQALLASYGISPEDADSRLHL-IDDGERVYRGSDAVLRLLRRL 77 (114)
T ss_pred CEECCCCHhHHHHHHHHHhcCCCCCEEEEECCCh-hhhhHHHhcCcCHHHHcCeeEE-ecCCCEEEEcHHHHHHHHHHc
Confidence 4667789999988877777764 3444444211 1111 1122211 022333 45665 899999999876554
No 198
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=37.58 E-value=1e+02 Score=20.88 Aligned_cols=16 Identities=19% Similarity=0.353 Sum_probs=11.7
Q ss_pred eEEeeccCCchHHHHH
Q 027498 6 VKLLGYWASPFALRVK 21 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr 21 (222)
+..++.++|++|++..
T Consensus 18 lv~f~a~wC~~C~~~~ 33 (125)
T cd02951 18 LLLFSQPGCPYCDKLK 33 (125)
T ss_pred EEEEeCCCCHHHHHHH
Confidence 4456777899998765
No 199
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=36.45 E-value=41 Score=22.25 Aligned_cols=20 Identities=15% Similarity=0.120 Sum_probs=13.1
Q ss_pred eEEeeccCCchHHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALK 25 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~ 25 (222)
+.+++.++||+|++..-.+.
T Consensus 9 v~~F~~~~C~~C~~~~~~~~ 28 (112)
T PF13098_consen 9 VVVFTDPWCPYCKKLEKELF 28 (112)
T ss_dssp EEEEE-TT-HHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHH
Confidence 45667889999998755554
No 200
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=35.27 E-value=1.1e+02 Score=20.50 Aligned_cols=54 Identities=20% Similarity=0.247 Sum_probs=30.2
Q ss_pred EEeeccCCchHHHHHHHHHH-----hCCCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCeec
Q 027498 7 KLLGYWASPFALRVKWALKL-----KGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGKPL 65 (222)
Q Consensus 7 ~L~~~~~s~~~~~vr~~L~~-----~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~~i 65 (222)
..++.++|+.|+.+.-.++. .++.| ..+|.... .+....-. ..+|+++ .+|..+
T Consensus 29 v~F~a~~c~~C~~l~~~l~~la~~~~~v~f--~~vd~~~~--~l~~~~~i-~~~Pt~~~f~~G~~v 89 (113)
T cd02957 29 VHFYEPGFPRCKILDSHLEELAAKYPETKF--VKINAEKA--FLVNYLDI-KVLPTLLVYKNGELI 89 (113)
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHCCCcEE--EEEEchhh--HHHHhcCC-CcCCEEEEEECCEEE
Confidence 34567788888876655543 24433 34443332 33333333 4799997 366554
No 201
>PF06110 DUF953: Eukaryotic protein of unknown function (DUF953); InterPro: IPR010357 This family consists of several hypothetical eukaryotic proteins of unknown function that are thioredoxin-like.; PDB: 1V9W_A 1WOU_A.
Probab=34.62 E-value=38 Score=23.49 Aligned_cols=59 Identities=20% Similarity=0.240 Sum_probs=26.1
Q ss_pred eccCCchHHHHHHH----HHHhCCCceEEeCCCCCCch------hhhhhCC---CCCcccEEEe--CCeecchHHH
Q 027498 10 GYWASPFALRVKWA----LKLKGVHYEYVEENLPNKSP------LLLRYNP---VYKKIPVLVH--NGKPLAESLL 70 (222)
Q Consensus 10 ~~~~s~~~~~vr~~----L~~~gi~~~~~~~~~~~~~~------~~~~~~p---~~~~vP~l~~--~~~~i~es~~ 70 (222)
+.++||.|+++.-. +....-....+.+...++.. .|. .+| . ..||+|+. ++..+.|...
T Consensus 34 g~sWCPDC~~aep~v~~~f~~~~~~~~lv~v~VG~r~~Wkdp~n~fR-~~p~~~l-~~IPTLi~~~~~~rL~e~e~ 107 (119)
T PF06110_consen 34 GQSWCPDCVAAEPVVEKAFKKAPENARLVYVEVGDRPEWKDPNNPFR-TDPDLKL-KGIPTLIRWETGERLVEEEC 107 (119)
T ss_dssp S-BSSHHHHHHHHHHHHHHHH-STTEEEEEEE---HHHHC-TTSHHH-H--CC----SSSEEEECTSS-EEEHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHhCCCCceEEEEEcCCHHHhCCCCCCce-Ecceeee-eecceEEEECCCCccchhhh
Confidence 34578999976644 44332234444443332221 222 222 2 35899984 4455555443
No 202
>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Probab=33.96 E-value=59 Score=20.32 Aligned_cols=22 Identities=9% Similarity=-0.076 Sum_probs=16.8
Q ss_pred eEEeeccCCchHHHHHHHHHHh
Q 027498 6 VKLLGYWASPFALRVKWALKLK 27 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~ 27 (222)
+.+|..+.||+|....-.+...
T Consensus 1 i~~f~d~~Cp~C~~~~~~l~~~ 22 (98)
T cd02972 1 IVEFFDPLCPYCYLFEPELEKL 22 (98)
T ss_pred CeEEECCCCHhHHhhhHHHHHH
Confidence 4578888999999877666654
No 203
>PF13728 TraF: F plasmid transfer operon protein
Probab=33.53 E-value=1.9e+02 Score=22.27 Aligned_cols=52 Identities=13% Similarity=0.044 Sum_probs=33.9
Q ss_pred eEEeeccCCchHHH----HHHHHHHhCCCceEEeCCCC---------CCchhhhhhCCCCCcccEEE
Q 027498 6 VKLLGYWASPFALR----VKWALKLKGVHYEYVEENLP---------NKSPLLLRYNPVYKKIPVLV 59 (222)
Q Consensus 6 ~~L~~~~~s~~~~~----vr~~L~~~gi~~~~~~~~~~---------~~~~~~~~~~p~~~~vP~l~ 59 (222)
+.+++...||+|+. ++.+....|++.-.+.+|.. .........+. ..+|++.
T Consensus 124 L~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~fp~~~~~~g~~~~l~v--~~~Pal~ 188 (215)
T PF13728_consen 124 LFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPSFPNPRPDPGQAKRLGV--KVTPALF 188 (215)
T ss_pred EEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcCCCCCCCCHHHHHHcCC--CcCCEEE
Confidence 56677788999984 66667777998888877632 11222223444 3789886
No 204
>PRK09381 trxA thioredoxin; Provisional
Probab=32.40 E-value=1.5e+02 Score=19.45 Aligned_cols=57 Identities=14% Similarity=0.029 Sum_probs=29.8
Q ss_pred eEEeeccCCchHHHHHHHHHH----hCCCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCee
Q 027498 6 VKLLGYWASPFALRVKWALKL----KGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGKP 64 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~----~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~~ 64 (222)
+..++.++||.|+...-.++. .+-.+....++......-....+. ..+|++. .+|..
T Consensus 25 vv~f~~~~C~~C~~~~p~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~v--~~~Pt~~~~~~G~~ 87 (109)
T PRK09381 25 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI--RGIPTLLLFKNGEV 87 (109)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCCcEEEEEECCCChhHHHhCCC--CcCCEEEEEeCCeE
Confidence 334566788988876544432 222244445554432222223344 4799986 36643
No 205
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=32.39 E-value=68 Score=25.39 Aligned_cols=20 Identities=10% Similarity=0.092 Sum_probs=16.0
Q ss_pred eEEeeccCCchHHHHHHHHH
Q 027498 6 VKLLGYWASPFALRVKWALK 25 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~ 25 (222)
+.+|..+.||||++..--+.
T Consensus 121 I~vFtDp~CpyC~kl~~~l~ 140 (251)
T PRK11657 121 VYVFADPNCPYCKQFWQQAR 140 (251)
T ss_pred EEEEECCCChhHHHHHHHHH
Confidence 66778889999999876654
No 206
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=32.31 E-value=1.2e+02 Score=19.21 Aligned_cols=56 Identities=16% Similarity=0.119 Sum_probs=30.6
Q ss_pred EEeeccCCchHHHHHHHHHHhC----CCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCee
Q 027498 7 KLLGYWASPFALRVKWALKLKG----VHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGKP 64 (222)
Q Consensus 7 ~L~~~~~s~~~~~vr~~L~~~g----i~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~~ 64 (222)
..++.++|+.|+...-.+.... -.+....++... ...+...... ..+|+++ .+|..
T Consensus 17 v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~-~~~l~~~~~i-~~~Pt~~~~~~g~~ 78 (96)
T cd02956 17 VDFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNCDA-QPQIAQQFGV-QALPTVYLFAAGQP 78 (96)
T ss_pred EEEECCCChHHHHHHHHHHHHHHHhCCcEEEEEEeccC-CHHHHHHcCC-CCCCEEEEEeCCEE
Confidence 3446677888887655554321 124444555443 3444443343 4699997 46643
No 207
>COG3526 Uncharacterized protein conserved in bacteria [Posttranslational modification, protein turnover, chaperones]
Probab=31.95 E-value=76 Score=20.45 Aligned_cols=27 Identities=15% Similarity=0.262 Sum_probs=22.1
Q ss_pred CCC--cceEEeeccCCchHHHHHHHHHHh
Q 027498 1 MAE--ESVKLLGYWASPFALRVKWALKLK 27 (222)
Q Consensus 1 m~~--~~~~L~~~~~s~~~~~vr~~L~~~ 27 (222)
|+. +.+.++|...|.|-.|.-|+..+.
T Consensus 1 m~~~~p~i~I~YCtQCnWlLRa~WmaQEl 29 (99)
T COG3526 1 MSTPKPRIEITYCTQCNWLLRAAWMAQEL 29 (99)
T ss_pred CCCCCceEEEEEechhhHHHHHHHHHHHH
Confidence 555 578999999999988888887775
No 208
>PHA03075 glutaredoxin-like protein; Provisional
Probab=31.89 E-value=78 Score=21.91 Aligned_cols=66 Identities=15% Similarity=0.096 Sum_probs=46.3
Q ss_pred ceEEeeccCCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhhhCCCCCcccEEEeCC-eecchHHHHHHHHHhhC
Q 027498 5 SVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNG-KPLAESLLIIEYIDEAW 79 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~-~~i~es~~I~~yL~~~~ 79 (222)
.+.|+|-|.|+-|+.+.-+|.+..=.|+...+++-.. ....|++-+|..++ ..+ -..+.+||...+
T Consensus 4 tLILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIlSf-------FsK~g~v~~lg~d~~y~l--Inn~~~~lgne~ 70 (123)
T PHA03075 4 TLILFGKPLCSVCESISEALKELEDEYDILRVNILSF-------FSKDGQVKVLGMDKGYTL--INNFFKHLGNEY 70 (123)
T ss_pred eEEEeCCcccHHHHHHHHHHHHhhccccEEEEEeeee-------eccCCceEEEecccceeh--HHHHHHhhcccE
Confidence 4889999999999999999998888899988875421 11126788887543 222 134667776544
No 209
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=31.70 E-value=65 Score=20.39 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=21.6
Q ss_pred CchHHHHHHHHHHhCCCceEEeCC
Q 027498 14 SPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 14 s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
-+|++|+.-+|+..|++|+-.+..
T Consensus 15 vGF~rk~L~I~E~~~is~Eh~PSG 38 (76)
T cd04911 15 VGFGRKLLSILEDNGISYEHMPSG 38 (76)
T ss_pred hcHHHHHHHHHHHcCCCEeeecCC
Confidence 489999999999999999988775
No 210
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=31.69 E-value=77 Score=23.20 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=27.9
Q ss_pred CCchHHHHHHHHHHhCCCceEEeCCCCCCchhhhh
Q 027498 13 ASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLR 47 (222)
Q Consensus 13 ~s~~~~~vr~~L~~~gi~~~~~~~~~~~~~~~~~~ 47 (222)
.-+.++++...|+..||+|+.........++.+.+
T Consensus 10 D~~~~~~a~~~L~~~gi~~dv~V~SaHRtp~~~~~ 44 (156)
T TIGR01162 10 DLPTMKKAADILEEFGIPYELRVVSAHRTPELMLE 44 (156)
T ss_pred hHHHHHHHHHHHHHcCCCeEEEEECcccCHHHHHH
Confidence 34789999999999999999999887755544433
No 211
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=31.35 E-value=1.7e+02 Score=19.88 Aligned_cols=59 Identities=14% Similarity=0.045 Sum_probs=30.6
Q ss_pred EEeeccCCchHHHHHHHHHH------hCCCceEEeCCCCCCchhhhhhCCCCCcccEEE--e-CCeecc
Q 027498 7 KLLGYWASPFALRVKWALKL------KGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--H-NGKPLA 66 (222)
Q Consensus 7 ~L~~~~~s~~~~~vr~~L~~------~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~-~~~~i~ 66 (222)
.-++.++|+.|+...-.+.. .+..|-.+.++... .+.....+..++.+|+++ + +|..+.
T Consensus 24 V~F~a~WC~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~~-~~~~~~~~~~g~~vPt~~f~~~~Gk~~~ 91 (117)
T cd02959 24 LLIHKTWCGACKALKPKFAESKEISELSHNFVMVNLEDDE-EPKDEEFSPDGGYIPRILFLDPSGDVHP 91 (117)
T ss_pred EEEeCCcCHHHHHHHHHHhhhHHHHhhcCcEEEEEecCCC-CchhhhcccCCCccceEEEECCCCCCch
Confidence 34566789999876544444 23345555554322 111123444422499997 3 555543
No 212
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=30.98 E-value=80 Score=24.65 Aligned_cols=22 Identities=5% Similarity=0.089 Sum_probs=17.5
Q ss_pred ceEEeeccCCchHHHHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALKL 26 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~~ 26 (222)
.+.+|..+.||||++..--+..
T Consensus 110 ~I~vFtDp~CpyCkkl~~~l~~ 131 (232)
T PRK10877 110 VITVFTDITCGYCHKLHEQMKD 131 (232)
T ss_pred EEEEEECCCChHHHHHHHHHHH
Confidence 4778889999999998766654
No 213
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=30.71 E-value=43 Score=23.06 Aligned_cols=63 Identities=14% Similarity=0.063 Sum_probs=40.1
Q ss_pred HHHHHHHHHhCCCceEEeCCCCC-CchhhhhhCCCCCcccEEEe---CCeecchHHHHHHHHHhhCC
Q 027498 18 LRVKWALKLKGVHYEYVEENLPN-KSPLLLRYNPVYKKIPVLVH---NGKPLAESLLIIEYIDEAWK 80 (222)
Q Consensus 18 ~~vr~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~vP~l~~---~~~~i~es~~I~~yL~~~~~ 80 (222)
...+=++...|++.+-+.++-.. ..++-....|+.|-+|+++| ...+.-|...|+.|+.++.-
T Consensus 26 ~LakEl~e~~g~~I~~~r~~~~~~l~~e~~~~~~~sGy~PtViD~lrRC~T~EEALEVInylek~GE 92 (128)
T PF09868_consen 26 ALAKELEEEEGISIEGYRLDEEQVLEEEEEEPDDFSGYNPTVIDYLRRCKTDEEALEVINYLEKRGE 92 (128)
T ss_pred HHHHHHhccCCCceeeeechhhhhhhhccccCCCccCCCChHHHHHHHhCcHHHHHHHHHHHHHhCC
Confidence 34566667778877665554221 01111123454588999986 56788899999999999754
No 214
>PHA02278 thioredoxin-like protein
Probab=29.93 E-value=1.7e+02 Score=19.44 Aligned_cols=57 Identities=9% Similarity=0.057 Sum_probs=28.3
Q ss_pred EeeccCCchHHHHHHHHHHh------CCCceEEeCCCCCC-chhhhhhCCCCCcccEEE--eCCeec
Q 027498 8 LLGYWASPFALRVKWALKLK------GVHYEYVEENLPNK-SPLLLRYNPVYKKIPVLV--HNGKPL 65 (222)
Q Consensus 8 L~~~~~s~~~~~vr~~L~~~------gi~~~~~~~~~~~~-~~~~~~~~p~~~~vP~l~--~~~~~i 65 (222)
-|+.++|+.|+...=.+... .+++-.+.++-... .+++....-. ..+|++. .+|..+
T Consensus 20 ~F~A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I-~~iPT~i~fk~G~~v 85 (103)
T PHA02278 20 MITQDNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDI-MSTPVLIGYKDGQLV 85 (103)
T ss_pred EEECCCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCC-ccccEEEEEECCEEE
Confidence 34566788888655444332 23344444442210 2333333333 4699997 366543
No 215
>cd03025 DsbA_FrnE_like DsbA family, FrnE-like subfamily; composed of uncharacterized proteins containing a CXXC motif with similarity to DsbA and FrnE. FrnE is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=29.70 E-value=97 Score=22.80 Aligned_cols=33 Identities=6% Similarity=-0.099 Sum_probs=21.8
Q ss_pred ceEEeeccCCchHHH----HHHHHHHh--CCCceEEeCC
Q 027498 5 SVKLLGYWASPFALR----VKWALKLK--GVHYEYVEEN 37 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~----vr~~L~~~--gi~~~~~~~~ 37 (222)
++.+|..+.||||.. ++-+.+.. +++++.+...
T Consensus 2 ~i~~~~D~~cp~c~~~~~~l~~l~~~~~~~~~v~~~~~~ 40 (193)
T cd03025 2 ELYYFIDPLCGWCYGFEPLLEKLKEEYGGGIEVELHLGG 40 (193)
T ss_pred eEEEEECCCCchhhCchHHHHHHHHHhCCCceEEEEecc
Confidence 478899999999984 44444444 5666665443
No 216
>cd03022 DsbA_HCCA_Iso DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).
Probab=29.27 E-value=84 Score=23.10 Aligned_cols=32 Identities=13% Similarity=0.136 Sum_probs=21.8
Q ss_pred eEEeeccCCchHHHH----HHHHHHhCCCceEEeCC
Q 027498 6 VKLLGYWASPFALRV----KWALKLKGVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~v----r~~L~~~gi~~~~~~~~ 37 (222)
+.+|+...||||... +-+....++.++.+++.
T Consensus 1 i~~~~D~~cP~cy~~~~~l~~~~~~~~~~i~~~p~~ 36 (192)
T cd03022 1 IDFYFDFSSPYSYLAHERLPALAARHGATVRYRPIL 36 (192)
T ss_pred CeEEEeCCChHHHHHHHHHHHHHHHhCCeeEEeeee
Confidence 467888999999854 33444557776766664
No 217
>PF12290 DUF3802: Protein of unknown function (DUF3802); InterPro: IPR020979 This family of proteins is found in bacteria and are typically between 114 and 143 amino acids in length. There is a conserved KNLFD sequence motif. The annotation with this family suggests that it may be the B subunit of bacterial type IIA DNA topoisomerase but there is no evidence to support this annotation.
Probab=29.14 E-value=60 Score=22.22 Aligned_cols=85 Identities=18% Similarity=0.143 Sum_probs=47.9
Q ss_pred HHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhcccchhhhhhhcCCcH----HHHHHHH-HHHHHHHHHHHhcCCC
Q 027498 68 SLLIIEYIDEAWKQNPLLPDDPYERANARFWAKFFDEKCVPEVMGAFASKGE----EQEKAAK-ARENLKMLERALEGKP 142 (222)
Q Consensus 68 s~~I~~yL~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~l~~le~~L~~~~ 142 (222)
-.+.++||.+..+ ++..+.....-...+.+.+.+.+...+..++..+++ .+-...+ ...+...|+..|++-
T Consensus 8 Y~~LI~yLte~L~---lFe~~~~~~~~~~Tv~d~vee~ia~~im~vc~Qnp~L~~~~R~~iirE~Daiv~DLeEVLa~V- 83 (113)
T PF12290_consen 8 YDALIEYLTENLS---LFESSQSGDTGDETVEDVVEEQIASQIMAVCEQNPELEFSQRFQIIREADAIVYDLEEVLASV- 83 (113)
T ss_pred HHHHHHHHHHhHH---HhcCCCCCCcccchHHHHHHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 3578889988765 443212222223334444555555556666654433 3444455 778888889988751
Q ss_pred cccCCCCChhHHHHHh
Q 027498 143 FFGGDKIGFLDIAVGW 158 (222)
Q Consensus 143 ~l~G~~~t~aD~~l~~ 158 (222)
.+..+|-.-..+..
T Consensus 84 --~~~~aT~eQ~~Fi~ 97 (113)
T PF12290_consen 84 --WNQKATNEQIAFIE 97 (113)
T ss_pred --HcCCCCHHHHHHHH
Confidence 24556666555543
No 218
>PRK10996 thioredoxin 2; Provisional
Probab=27.73 E-value=2.2e+02 Score=19.97 Aligned_cols=57 Identities=14% Similarity=0.030 Sum_probs=31.5
Q ss_pred eEEeeccCCchHHHHHHHHHH----hCCCceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCee
Q 027498 6 VKLLGYWASPFALRVKWALKL----KGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGKP 64 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~----~gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~~ 64 (222)
+..++.++|+.|+...-.+.. .+-.+....+|... ..++....-. ..+|+++ .+|..
T Consensus 56 vv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~-~~~l~~~~~V-~~~Ptlii~~~G~~ 118 (139)
T PRK10996 56 VIDFWAPWCGPCRNFAPIFEDVAAERSGKVRFVKVNTEA-ERELSARFRI-RSIPTIMIFKNGQV 118 (139)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEeCCC-CHHHHHhcCC-CccCEEEEEECCEE
Confidence 445567788888865444433 23234555566544 3344433333 4699987 46653
No 219
>COG5515 Uncharacterized conserved small protein [Function unknown]
Probab=27.04 E-value=54 Score=19.71 Aligned_cols=22 Identities=36% Similarity=0.437 Sum_probs=16.1
Q ss_pred ceEEeecc----CCchHHHHHHHHHH
Q 027498 5 SVKLLGYW----ASPFALRVKWALKL 26 (222)
Q Consensus 5 ~~~L~~~~----~s~~~~~vr~~L~~ 26 (222)
+++||.+- .|.+|+||-.+|..
T Consensus 2 ~mKLYRfiTGpDDssFChrvta~LN~ 27 (70)
T COG5515 2 KMKLYRFITGPDDSSFCHRVTAALNK 27 (70)
T ss_pred cceeeEeecCCchHHHHHHHHHHHhC
Confidence 56777543 46899999988864
No 220
>PRK14530 adenylate kinase; Provisional
Probab=25.39 E-value=1e+02 Score=23.44 Aligned_cols=32 Identities=19% Similarity=0.072 Sum_probs=27.7
Q ss_pred CCCcceEEeeccCCchHHHHHHHHHHhCCCce
Q 027498 1 MAEESVKLLGYWASPFALRVKWALKLKGVHYE 32 (222)
Q Consensus 1 m~~~~~~L~~~~~s~~~~~vr~~L~~~gi~~~ 32 (222)
|.++.+.+.|.|+|+-+-.++.+.+..|+++-
T Consensus 1 ~~~~~I~i~G~pGsGKsT~~~~La~~~~~~~i 32 (215)
T PRK14530 1 MSQPRILLLGAPGAGKGTQSSNLAEEFGVEHV 32 (215)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHhCCeEE
Confidence 67778999999999999999999999987643
No 221
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=24.79 E-value=1.5e+02 Score=19.95 Aligned_cols=30 Identities=20% Similarity=0.073 Sum_probs=23.6
Q ss_pred EEeeccCCchHHHHHHHHHHhCCCceEEeC
Q 027498 7 KLLGYWASPFALRVKWALKLKGVHYEYVEE 36 (222)
Q Consensus 7 ~L~~~~~s~~~~~vr~~L~~~gi~~~~~~~ 36 (222)
.|......|...-++.+.+++|||++...-
T Consensus 59 vLVr~~~~pd~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 59 VLVRDPDDPDLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred EEECCCCCccHHHHHHHHHHcCCcEEEeCC
Confidence 455556678889999999999999887754
No 222
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=24.22 E-value=1.8e+02 Score=17.86 Aligned_cols=46 Identities=15% Similarity=0.308 Sum_probs=29.4
Q ss_pred cccEEEeCCeecchHHHHHHHHHhhCCCCCC-----CC----CCHHHHHHHHHHHH
Q 027498 54 KIPVLVHNGKPLAESLLIIEYIDEAWKQNPL-----LP----DDPYERANARFWAK 100 (222)
Q Consensus 54 ~vP~l~~~~~~i~es~~I~~yL~~~~~~~~l-----~p----~~~~~~~~~~~~~~ 100 (222)
.-|++...| ..+|-.+|.++|.+....-++ -. .+...|..++.|+.
T Consensus 15 ~dPVi~~~G-~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~pn~~Lk~~I~~~~~ 69 (73)
T PF04564_consen 15 RDPVILPSG-HTYERSAIERWLEQNGGTDPFTRQPLSESDLIPNRALKSAIEEWCA 69 (73)
T ss_dssp SSEEEETTS-EEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE-HHHHHHHHHHHH
T ss_pred hCceeCCcC-CEEcHHHHHHHHHcCCCCCCCCCCcCCcccceECHHHHHHHHHHHH
Confidence 359988777 889999999999994321111 11 24456666666654
No 223
>cd03024 DsbA_FrnE DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=23.99 E-value=89 Score=23.21 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=20.3
Q ss_pred eEEeeccCCchHHHHHH----HHHHh----CCCceEEeCC
Q 027498 6 VKLLGYWASPFALRVKW----ALKLK----GVHYEYVEEN 37 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~----~L~~~----gi~~~~~~~~ 37 (222)
+++|+...||||-...- ++... ++.++.+++.
T Consensus 1 I~~~~D~~cP~cyl~~~~l~~~~~~~~~~~~~~v~~~p~~ 40 (201)
T cd03024 1 IDIWSDVVCPWCYIGKRRLEKALAELGDEVDVEIEWRPFE 40 (201)
T ss_pred CeEEecCcCccHHHHHHHHHHHHHhCCCCCceEEEEeeee
Confidence 46888999999984443 33344 4555555554
No 224
>COG2761 FrnE Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.74 E-value=41 Score=26.20 Aligned_cols=18 Identities=11% Similarity=0.195 Sum_probs=13.7
Q ss_pred ceEEeeccCCchHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKW 22 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~ 22 (222)
++.+|+...||||...+-
T Consensus 7 ~I~v~sD~vCPwC~ig~~ 24 (225)
T COG2761 7 EIDVFSDVVCPWCYIGKR 24 (225)
T ss_pred EEEEEeCCcCchhhcCHH
Confidence 577888899999984333
No 225
>TIGR01068 thioredoxin thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.
Probab=22.39 E-value=2.1e+02 Score=17.92 Aligned_cols=51 Identities=14% Similarity=0.023 Sum_probs=26.2
Q ss_pred EEeeccCCchHHHHHHHHHHh----CCCceEEeCCCCCCchhhhhhCCCCCcccEEE
Q 027498 7 KLLGYWASPFALRVKWALKLK----GVHYEYVEENLPNKSPLLLRYNPVYKKIPVLV 59 (222)
Q Consensus 7 ~L~~~~~s~~~~~vr~~L~~~----gi~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~ 59 (222)
..++.++|+.|+...-.+... +-......++... ...+....-. ..+|++.
T Consensus 19 i~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~-~~~~~~~~~v-~~~P~~~ 73 (101)
T TIGR01068 19 VDFWAPWCGPCKMIAPILEELAKEYEGKVKFVKLNVDE-NPDIAAKYGI-RSIPTLL 73 (101)
T ss_pred EEEECCCCHHHHHhCHHHHHHHHHhcCCeEEEEEECCC-CHHHHHHcCC-CcCCEEE
Confidence 345666788888765444332 2123444444433 2333333232 3699886
No 226
>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.
Probab=21.73 E-value=2.3e+02 Score=18.16 Aligned_cols=52 Identities=12% Similarity=-0.056 Sum_probs=27.4
Q ss_pred eEEeeccCCchHHHHHHHHHHhCC----CceEEeCCCCCCchhhhhhCCCCCcccEEE
Q 027498 6 VKLLGYWASPFALRVKWALKLKGV----HYEYVEENLPNKSPLLLRYNPVYKKIPVLV 59 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi----~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~ 59 (222)
+..++.++|+.|+...-.+....- .+....++... ...+...... ..+|++.
T Consensus 22 ~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~vd~~~-~~~~~~~~~v-~~~Pt~~ 77 (101)
T cd03003 22 FVNFYSPRCSHCHDLAPTWREFAKEMDGVIRIGAVNCGD-DRMLCRSQGV-NSYPSLY 77 (101)
T ss_pred EEEEECCCChHHHHhHHHHHHHHHHhcCceEEEEEeCCc-cHHHHHHcCC-CccCEEE
Confidence 345677788888865555433211 13444455443 2333333333 4789986
No 227
>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library. It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.
Probab=21.63 E-value=3.2e+02 Score=19.73 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=30.3
Q ss_pred eEEeeccCCchHHHHHHHHHHh-----CCCceEEeCCCCCCchhhhh-hCCC----CCcccEEE--eCCeec
Q 027498 6 VKLLGYWASPFALRVKWALKLK-----GVHYEYVEENLPNKSPLLLR-YNPV----YKKIPVLV--HNGKPL 65 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~-----gi~~~~~~~~~~~~~~~~~~-~~p~----~~~vP~l~--~~~~~i 65 (222)
+..|+.++|+.|+...-.++.. +-.+....+|.... +++.. .+-. -+++|++. .+|..+
T Consensus 51 vV~Fya~wC~~Ck~l~p~l~~la~~~~~~~v~f~~VDvd~~-~~la~~~~V~~~~~v~~~PT~ilf~~Gk~v 121 (152)
T cd02962 51 LVEFFTTWSPECVNFAPVFAELSLKYNNNNLKFGKIDIGRF-PNVAEKFRVSTSPLSKQLPTIILFQGGKEV 121 (152)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHcccCCeEEEEEECCCC-HHHHHHcCceecCCcCCCCEEEEEECCEEE
Confidence 4556777888888665444322 22244455554432 23332 2221 02389987 466554
No 228
>cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein. It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing.
Probab=21.43 E-value=2.6e+02 Score=19.17 Aligned_cols=55 Identities=11% Similarity=0.112 Sum_probs=29.2
Q ss_pred eeccCCchHHHHHHHHHHhCCC----ceEEeCCCCCCchhhhhhCCCCCcccEEE--eCCeec
Q 027498 9 LGYWASPFALRVKWALKLKGVH----YEYVEENLPNKSPLLLRYNPVYKKIPVLV--HNGKPL 65 (222)
Q Consensus 9 ~~~~~s~~~~~vr~~L~~~gi~----~~~~~~~~~~~~~~~~~~~p~~~~vP~l~--~~~~~i 65 (222)
++-++||-|+.+.=.+...--. .....+|... .+++....-. ..+|++. .+|..+
T Consensus 21 F~A~WCgpCk~m~P~le~la~~~~~~v~f~kVDvD~-~~~la~~~~V-~~iPTf~~fk~G~~v 81 (114)
T cd02954 21 FGRDWDPVCMQMDEVLAKIAEDVSNFAVIYLVDIDE-VPDFNKMYEL-YDPPTVMFFFRNKHM 81 (114)
T ss_pred EECCCChhHHHHHHHHHHHHHHccCceEEEEEECCC-CHHHHHHcCC-CCCCEEEEEECCEEE
Confidence 5666788888665555433211 1233444433 3444444343 4699997 466543
No 229
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=21.18 E-value=2.6e+02 Score=18.43 Aligned_cols=53 Identities=13% Similarity=0.123 Sum_probs=27.8
Q ss_pred eEEeeccCCchHHHHHHHHHH-----hCCCceEEeCCCCCCchhhh-hhCCCCCcccEEE
Q 027498 6 VKLLGYWASPFALRVKWALKL-----KGVHYEYVEENLPNKSPLLL-RYNPVYKKIPVLV 59 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~-----~gi~~~~~~~~~~~~~~~~~-~~~p~~~~vP~l~ 59 (222)
+..|+.++||.|+...-.+.. .+..+....++.......+. ..... ..+|++.
T Consensus 25 lv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~d~~~~~~~~~~~~v-~~~Pti~ 83 (109)
T cd02993 25 LVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNADGEQREFAKEELQL-KSFPTIL 83 (109)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECCccchhhHHhhcCC-CcCCEEE
Confidence 556778889999866443433 23234444444332122222 22343 4699886
No 230
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=21.15 E-value=2.5e+02 Score=23.72 Aligned_cols=105 Identities=18% Similarity=0.110 Sum_probs=64.0
Q ss_pred ccEEEeCCeecchHHHHHHHHHhhCCCCCCC-CCCHHHHHHHHHHHHHHhccc--------chhhhhhh-cCCcHHHHHH
Q 027498 55 IPVLVHNGKPLAESLLIIEYIDEAWKQNPLL-PDDPYERANARFWAKFFDEKC--------VPEVMGAF-ASKGEEQEKA 124 (222)
Q Consensus 55 vP~l~~~~~~i~es~~I~~yL~~~~~~~~l~-p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~ 124 (222)
.+.+.+.+..++|..+|...|...-. .++ +-+..+|..+-.|+.-+.+.- +..+...+ .... .+--
T Consensus 98 w~~~~~~dQ~~VEaa~la~aL~~a~~--~lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~~G--~~~d 173 (361)
T PF10022_consen 98 WGFIGDYDQRLVEAASLALALLRAPE--WLWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKKVG--EEYD 173 (361)
T ss_pred cCCcccchhhHhHHHHHHHHHHHCHH--HHHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHHcC--CCCc
Confidence 44455566899999999998876422 244 678888888888887554321 11221111 1000 0011
Q ss_pred HH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHH
Q 027498 125 AK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWG 163 (222)
Q Consensus 125 ~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~ 163 (222)
.. +...++.+|+.-.+..|.....-.-.|....-+++.+
T Consensus 174 ~~~i~~~l~~~e~~Y~GdGWY~DG~~~~~DYYns~aih~y 213 (361)
T PF10022_consen 174 EERIDYDLERIEEWYLGDGWYSDGPEFQFDYYNSWAIHPY 213 (361)
T ss_pred HHHHHHHHHHHHHHhccCCccccCCccCCcchHHHHHHHH
Confidence 24 7788888888877777775444566787775555555
No 231
>PF11823 DUF3343: Protein of unknown function (DUF3343); InterPro: IPR021778 This family of proteins are functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.
Probab=20.81 E-value=1.7e+02 Score=17.99 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=25.1
Q ss_pred EeeccCCchHHHHHHHHHHhCCCceEEeCC
Q 027498 8 LLGYWASPFALRVKWALKLKGVHYEYVEEN 37 (222)
Q Consensus 8 L~~~~~s~~~~~vr~~L~~~gi~~~~~~~~ 37 (222)
+..|+....+.++.-+|...|++++.++++
T Consensus 5 ~i~F~st~~a~~~ek~lk~~gi~~~liP~P 34 (73)
T PF11823_consen 5 LITFPSTHDAMKAEKLLKKNGIPVRLIPTP 34 (73)
T ss_pred EEEECCHHHHHHHHHHHHHCCCcEEEeCCC
Confidence 455666678999999999999999999885
No 232
>PRK15371 effector protein YopJ; Provisional
Probab=20.67 E-value=3.9e+02 Score=21.81 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=34.2
Q ss_pred HHHH-HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHH
Q 027498 123 KAAK-ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGR 164 (222)
Q Consensus 123 ~~~~-~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~ 164 (222)
...+ +..+++.||..++.+.|+ -+.++..|+-+.|.+....
T Consensus 23 ~~~~~L~~~i~~le~~~~~G~~~-~~~~~~~Di~~lp~lv~~~ 64 (287)
T PRK15371 23 ISNEELKNIITQLEDDIADGSWI-HKNYARTDLEVMPALVAQA 64 (287)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCC-CchhHHhhHHhhHHHHHHH
Confidence 4456 999999999999998888 4459999999999887763
No 233
>PF03711 OKR_DC_1_C: Orn/Lys/Arg decarboxylase, C-terminal domain; InterPro: IPR008286 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 3Q16_C 3N75_A 2X3L_A 2VYC_D.
Probab=20.58 E-value=51 Score=23.46 Aligned_cols=47 Identities=26% Similarity=0.237 Sum_probs=28.5
Q ss_pred CceEEeCCCC--CCchhhhhhCCCCCcccEEEeCCeecchHHHHHHHHHhh
Q 027498 30 HYEYVEENLP--NKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEA 78 (222)
Q Consensus 30 ~~~~~~~~~~--~~~~~~~~~~p~~~~vP~l~~~~~~i~es~~I~~yL~~~ 78 (222)
+.+.+.++-. .-..++.-.-|. | +|+|.-|..+-.++..|++||...
T Consensus 64 ~~e~v~l~~~~GrIsae~i~pYPP-G-IPll~pGE~it~~~~~~i~yl~~l 112 (136)
T PF03711_consen 64 EKERVPLEEAVGRISAEFIVPYPP-G-IPLLVPGERITEETEEIIDYLLAL 112 (136)
T ss_dssp -EEEEEGGG-TTSBBSS-BEECTT-T-S-SB-TTEEB-STTHHHHHHHHHH
T ss_pred cceEEEccccCCeEEEeeeeecCC-C-CcEECCccccccchHHHHHHHHHH
Confidence 4455555322 334555566787 5 999998887777889999999764
No 234
>cd02985 TRX_CDSP32 TRX family, chloroplastic drought-induced stress protein of 32 kD (CDSP32); CDSP32 is composed of two TRX domains, a C-terminal TRX domain which contains a redox active CXXC motif and an N-terminal TRX-like domain which contains an SXXS sequence instead of the redox active motif. CDSP32 is a stress-inducible TRX, i.e., it acts as a TRX by reducing protein disulfides and is induced by environmental and oxidative stress conditions. It plays a critical role in plastid defense against oxidative damage, a role related to its function as a physiological electron donor to BAS1, a plastidic 2-cys peroxiredoxin. Plants lacking CDSP32 exhibit decreased photosystem II photochemical efficiencies and chlorophyll retention compared to WT controls, as well as an increased proportion of BAS1 in its overoxidized monomeric form.
Probab=20.51 E-value=2.6e+02 Score=18.23 Aligned_cols=54 Identities=13% Similarity=0.150 Sum_probs=26.6
Q ss_pred EeeccCCchHHHHHHHHHH-----hCCCceEEeCCCCCCc--hhhhhhCCCCCcccEEE--eCCee
Q 027498 8 LLGYWASPFALRVKWALKL-----KGVHYEYVEENLPNKS--PLLLRYNPVYKKIPVLV--HNGKP 64 (222)
Q Consensus 8 L~~~~~s~~~~~vr~~L~~-----~gi~~~~~~~~~~~~~--~~~~~~~p~~~~vP~l~--~~~~~ 64 (222)
.|+.++|+-|+...=.+.. .++. ...++..... .++...... ..+|+++ .+|..
T Consensus 21 ~F~a~wC~~C~~~~p~l~~la~~~~~v~--~~~vd~d~~~~~~~l~~~~~V-~~~Pt~~~~~~G~~ 83 (103)
T cd02985 21 EFALKHSGPSVKIYPTMVKLSRTCNDVV--FLLVNGDENDSTMELCRREKI-IEVPHFLFYKDGEK 83 (103)
T ss_pred EEECCCCHhHHHHhHHHHHHHHHCCCCE--EEEEECCCChHHHHHHHHcCC-CcCCEEEEEeCCeE
Confidence 3455677778755444433 2333 3344433221 244433333 4699887 36644
No 235
>cd03019 DsbA_DsbA DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold. It is involved in the oxidative protein folding pathway in prokaryotes, and is the strongest thiol oxidant known, due to the unusual stability of the thiolate anion form of the first cysteine in the CXXC motif. The highly unstable oxidized form of DsbA directly donates disulfide bonds to reduced proteins secreted into the bacterial periplasm. This rapid and unidirectional process helps to catalyze the folding of newly-synthesized polypeptides. To regain catalytic activity, reduced DsbA is then reoxidized by the membrane protein DsbB, which generates its disulfides from oxidized quinones, which in turn are reoxidized by the electron transport chain.
Probab=20.32 E-value=1.6e+02 Score=21.26 Aligned_cols=21 Identities=14% Similarity=0.118 Sum_probs=15.9
Q ss_pred ceEEeeccCCchHHHHHHHHH
Q 027498 5 SVKLLGYWASPFALRVKWALK 25 (222)
Q Consensus 5 ~~~L~~~~~s~~~~~vr~~L~ 25 (222)
.+..|..+.||+|.+..-.+.
T Consensus 18 ~i~~f~D~~Cp~C~~~~~~~~ 38 (178)
T cd03019 18 EVIEFFSYGCPHCYNFEPILE 38 (178)
T ss_pred EEEEEECCCCcchhhhhHHHH
Confidence 567788889999997665553
No 236
>cd03006 PDI_a_EFP1_N PDIa family, N-terminal EFP1 subfamily; EFP1 is a binding partner protein of thyroid oxidase (ThOX), also called Duox. ThOX proteins are responsible for the generation of hydrogen peroxide, a crucial substrate of thyroperoxidase, which functions to iodinate thyroglobulin and synthesize thyroid hormones. EFP1 was isolated through a yeast two-hybrid method using the EF-hand fragment of dog Duox1 as a bait. It could be one of the partners in the assembly of a multiprotein complex constituting the thyroid hydrogen peroxide generating system. EFP1 contains two TRX domains related to the redox active TRX domains of protein disulfide isomerase (PDI). This subfamily is composed of the N-terminal TRX domain of EFP1, which contains a CXXS sequence in place of the typical CXXC motif, similar to ERp44. The CXXS motif allows the formation of stable mixed disulfides, crucial for the ER-retention function of ERp44.
Probab=20.07 E-value=2.1e+02 Score=19.40 Aligned_cols=51 Identities=8% Similarity=-0.149 Sum_probs=27.8
Q ss_pred eEEeeccCCchHHHHHHHHHHhCCC----ceEEeCCCCCCchhhh--hhCCCCCcccEEE
Q 027498 6 VKLLGYWASPFALRVKWALKLKGVH----YEYVEENLPNKSPLLL--RYNPVYKKIPVLV 59 (222)
Q Consensus 6 ~~L~~~~~s~~~~~vr~~L~~~gi~----~~~~~~~~~~~~~~~~--~~~p~~~~vP~l~ 59 (222)
+..|+-++|+.|+...-.+++..-. .....+|... ...+. ..+- ..+|++.
T Consensus 33 lV~FyA~WC~~Ck~l~p~~~~la~~~~~~v~~~~Vd~d~-~~~l~~~~~~I--~~~PTl~ 89 (113)
T cd03006 33 LVMYYAPWDAQSQAARQEFEQVAQKLSDQVLFVAINCWW-PQGKCRKQKHF--FYFPVIH 89 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCC-ChHHHHHhcCC--cccCEEE
Confidence 3456777888888776666554322 2233444332 22332 2233 3689887
No 237
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp. causes a rapid induction of the mitogen-activated protein kinase (MAPK; including the ERK, JNK and p38 pathways) and nuclear factor kappaB (NF-kappaB) signalling pathways that would typically result in cytokine production and initiation of the innate immune response. However, these pathways are rapidly inhibited promoting apoptosis. YopJ has been shown to block phosphorylation of active site residues []. It has also been shown that YopJ acetyltransferase is activated by eukaryotic host cell inositol hexakisphosphate []. Serine and threonine acetylation is yet another complication to the control of signalling pathways and may be a may be a widespread mode of biochemical regulation of endogenous processes in eukaryotic cells. It has been shown that YopJ is a serine/threonine acetyltransferase []. It acetylates the serine and threonine residues in the phosphorylation sites of MAPK kinases and nuclear factor kappaB, preventing their activation by phosphorylation and the inhibition of these signalling pathways []. This entry contains YopJ and related proteins.
Probab=20.06 E-value=1.5e+02 Score=22.09 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhcCCCcccCCCCChhHHHHHhHHHHHH
Q 027498 127 ARENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGR 164 (222)
Q Consensus 127 ~~~~l~~le~~L~~~~~l~G~~~t~aD~~l~~~l~~~~ 164 (222)
+......+++.+..+.|+ .+.++-.|+-+.|.+....
T Consensus 4 L~~y~~~~~~~~~~g~~~-~~~~~~~D~~~lp~lv~~~ 40 (177)
T PF03421_consen 4 LKEYIERLEDDIKNGSWP-NESYAELDIKMLPALVAAE 40 (177)
T ss_pred HHHHHHHHHHHHHhCCCC-CcchhhhhHHHHHHHHHHH
Confidence 567778889999888888 7779999999999887763
Done!