Your job contains 1 sequence.
>027501
MTIKRVLHWQPNVGTSVNSQILNEVSQCVESINGVKEGRWKATLTFYKPMLRDQSLASEF
PRDFLGIMVPECPNKYFFVIRTQRIVLEADSTIQTIMEKLQSYKMRVALNFEGFQYQLGD
FQLRVGKVVPTHSENLRGIVMEVEYLPISSIEKSRQIMEEFLEIWQEALSKRTLPGHFMP
MEPNFIEYGLSDHYSSQHTAVQYATVMAQLIASVQSVQSMRN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027501
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062799 - symbol:AT2G28230 species:3702 "Arabi... 849 8.0e-85 1
TAIR|locus:2122318 - symbol:AT4G09070 species:3702 "Arabi... 769 2.4e-76 1
TAIR|locus:2057886 - symbol:AT2G28020 "AT2G28020" species... 208 6.7e-17 1
DICTYBASE|DDB_G0290781 - symbol:med20 "putative mediator ... 170 7.1e-13 1
>TAIR|locus:2062799 [details] [associations]
symbol:AT2G28230 species:3702 "Arabidopsis thaliana"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR013921 Pfam:PF08612 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016592 GO:GO:0001104 EMBL:AC006202
EMBL:BT010690 EMBL:BT010970 IPI:IPI00537410 PIR:D84682
RefSeq:NP_180390.2 UniGene:At.38644 ProteinModelPortal:Q6NPF4
IntAct:Q6NPF4 PaxDb:Q6NPF4 PRIDE:Q6NPF4 DNASU:817369
EnsemblPlants:AT2G28230.1 GeneID:817369 KEGG:ath:AT2G28230
TAIR:At2g28230 eggNOG:NOG281517 InParanoid:Q6NPF4 KO:K13528
OMA:HTAVQYA PhylomeDB:Q6NPF4 ProtClustDB:CLSN2685381
Genevestigator:Q6NPF4 Uniprot:Q6NPF4
Length = 219
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 160/218 (73%), Positives = 194/218 (88%)
Query: 1 MTIKRVLHWQPNVGTSVNSQILNEVSQCVESINGVKEGRWKATLTFYKPMLRDQSLASEF 60
M +K VLHWQPN G++V+SQILNE +QCVESINGVKEGRWKATL +YKPML+DQ+ EF
Sbjct: 1 MPVKWVLHWQPNQGSTVSSQILNEATQCVESINGVKEGRWKATLNYYKPMLKDQANQLEF 60
Query: 61 PRDFLGIMVPECPNKYFFVIRTQRIVLEADSTIQTIMEKLQSYKMRVALNFEGFQYQLGD 120
PRDFLGI + + PNKY+F+IRTQRIVLEADS+IQ IMEKLQSYK +VAL F+GFQYQLGD
Sbjct: 61 PRDFLGISLADQPNKYYFIIRTQRIVLEADSSIQLIMEKLQSYKSKVALYFDGFQYQLGD 120
Query: 121 FQLRVGKVVPTHSENLRGIVMEVEYLPISSIEKSRQIMEEFLEIWQEALSKRTLPGHFMP 180
F+LRVGKVVPTHSEN+RGIVMEVEYLPISS+EK++++MEEFLEIW EAL+KR+LPG F+
Sbjct: 121 FRLRVGKVVPTHSENVRGIVMEVEYLPISSMEKAQKVMEEFLEIWNEALAKRSLPGKFVN 180
Query: 181 MEPNFIEYGLSDHYSSQHTAVQYATVMAQLIASVQSVQ 218
++ NF E+GL D Y+ QHTAV+YA VMA +IA+VQ+V+
Sbjct: 181 IDLNFGEFGLGDIYTPQHTAVRYALVMAHMIATVQAVR 218
>TAIR|locus:2122318 [details] [associations]
symbol:AT4G09070 species:3702 "Arabidopsis thaliana"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA]
InterPro:IPR013921 Pfam:PF08612 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161514 GO:GO:0016592 GO:GO:0001104
KO:K13528 ProtClustDB:CLSN2685381 IPI:IPI00541022 PIR:G85091
RefSeq:NP_192646.1 UniGene:At.54222 ProteinModelPortal:Q9M0S0
PaxDb:Q9M0S0 PRIDE:Q9M0S0 EnsemblPlants:AT4G09070.1 GeneID:826485
KEGG:ath:AT4G09070 TAIR:At4g09070 eggNOG:NOG280665
InParanoid:Q9M0S0 OMA:VETDREM PhylomeDB:Q9M0S0
Genevestigator:Q9M0S0 Uniprot:Q9M0S0
Length = 219
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 141/216 (65%), Positives = 185/216 (85%)
Query: 1 MTIKRVLHWQPNVGTSVNSQILNEVSQCVESINGVKEGRWKATLTFYKPMLRDQSLASEF 60
M +K +LHWQPN G++ +SQILNEV+Q +ES+NGVKEG WKATL +YKPML+DQ+ +EF
Sbjct: 1 MPVKWLLHWQPNQGSTFSSQILNEVTQSIESLNGVKEGTWKATLNYYKPMLQDQANQAEF 60
Query: 61 PRDFLGIMVPECPNKYFFVIRTQRIVLEADSTIQTIMEKLQSYKMRVALNFEGFQYQLGD 120
PR+F+GI +PE P+KY+FVIR+QRIV+EADS+IQ IME LQSYK +++ FEG +YQLGD
Sbjct: 61 PREFVGISLPEEPDKYYFVIRSQRIVVEADSSIQMIMESLQSYKCKLSFYFEGLEYQLGD 120
Query: 121 FQLRVGKVVPTHSENLRGIVMEVEYLPISSIEKSRQIMEEFLEIWQEALSKRTLPGHFMP 180
F+LRVGKVVPTH+E +RG+VMEVEYLPISS+ ++++MEEFLEIWQEA+SKR+LPG F+
Sbjct: 121 FRLRVGKVVPTHAETIRGVVMEVEYLPISSMGMAKKLMEEFLEIWQEAMSKRSLPGKFVN 180
Query: 181 MEPNFIEYGLSDHYSSQHTAVQYATVMAQLIASVQS 216
E NF ++GL D+Y+ QHTAV YA MA L+A++Q+
Sbjct: 181 KELNFEKFGLGDNYTPQHTAVGYAFFMANLMAAIQA 216
>TAIR|locus:2057886 [details] [associations]
symbol:AT2G28020 "AT2G28020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006929
KO:K13528 IPI:IPI00532948 PIR:G84679 RefSeq:NP_180369.1
UniGene:At.52945 EnsemblPlants:AT2G28020.1 GeneID:817346
KEGG:ath:AT2G28020 TAIR:At2g28020 eggNOG:KOG1383
HOGENOM:HOG000149145 InParanoid:Q8S8F0 OMA:HYATVMA
Genevestigator:Q8S8F0 Uniprot:Q8S8F0
Length = 70
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 41/68 (60%), Positives = 56/68 (82%)
Query: 151 IEKSRQIMEEFLEIWQEALSKRTLPGHFMPMEPNFIEYGLSDHYSSQHTAVQ-YATVMAQ 209
+E +R++MEEFLEIW EAL+KR+LPG F+ + NF E+GL D+Y+ QHTAV+ YA VMA
Sbjct: 1 MEIARKVMEEFLEIWNEALAKRSLPGKFVNKDLNFGEFGLGDNYTPQHTAVRNYALVMAH 60
Query: 210 LIASVQSV 217
+IA+VQ+V
Sbjct: 61 MIATVQAV 68
>DICTYBASE|DDB_G0290781 [details] [associations]
symbol:med20 "putative mediator complex subunit 20"
species:44689 "Dictyostelium discoideum" [GO:0016592 "mediator
complex" evidence=IEA;ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR013921 Pfam:PF08612 dictyBase:DDB_G0290781
GenomeReviews:CM000154_GR GO:GO:0006366 GO:GO:0016592 GO:GO:0001104
EMBL:AAFI02000171 KO:K13528 OMA:VETDREM eggNOG:NOG268717
RefSeq:XP_635527.1 EnsemblProtists:DDB0266923 GeneID:8627824
KEGG:ddi:DDB_G0290781 ProtClustDB:CLSZ2728775 Uniprot:Q54FL3
Length = 195
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 58/190 (30%), Positives = 93/190 (48%)
Query: 22 LNEVSQCVESINGVKEGRWKATLTFYKPMLRDQSLASEFPRDFLGIMVPECPNKYFFVIR 81
L E+++ +E + G+K + Y + D S + PR+F ++ E P K F V R
Sbjct: 13 LPEMTKRIEFLGGIKVSTGTINCSLYLERVPDGS--NLIPREFHLLLYDEKPKKCFTVCR 70
Query: 82 TQRIVLEADSTIQTIMEKLQSYKMRVALNFEGFQYQLGDFQLRVGKVVPTHSENLRGIVM 141
++E D + +I+EK SYK R +Y+LGDF +RVG +V +E +RGI++
Sbjct: 71 DT--IVETDREMVSILEKTNSYKKRQTTEALISKYELGDFIIRVGPIV-FRTE-IRGILV 126
Query: 142 EVEYL----PISSIEKSRQIMEEFLEIWQEALSKRTLPGHFMPMEPNFIEYG-LSDHYSS 196
EVEY P++S +++ EF+ L P + +F Y L YS
Sbjct: 127 EVEYTACSTPVTSPFNCTKLLSEFIN---GNLGPFPEP---IQTSFDFSAYPTLPKSYSD 180
Query: 197 QHTAVQYATV 206
HT+ QY +
Sbjct: 181 LHTSYQYVNL 190
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 222 0.00096 112 3 11 22 0.50 32
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 601 (64 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.75u 0.22s 20.97t Elapsed: 00:00:00
Total cpu time: 20.75u 0.22s 20.97t Elapsed: 00:00:00
Start: Fri May 10 19:16:05 2013 End: Fri May 10 19:16:05 2013