BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027503
(222 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 359 bits (921), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 175/221 (79%), Positives = 194/221 (87%), Gaps = 5/221 (2%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
DS+D+ECDYLFKAV+IGDSAVGKSNLLSRF+RDEFRLDSKPTIGVEFAYRNI+VGDKLI
Sbjct: 3 ADSFDDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDKLI 62
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFEN KKWLRELR+F M IV
Sbjct: 63 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIV 122
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL HSREV+EEEGK LAETEGL FMETSA++NLNVE+AFL MI +IH+ T QK+
Sbjct: 123 LVGNKSDLGHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQKN 182
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCCYK 222
L AK+N+ L GKEII++DHEV+ATKQSSCC +
Sbjct: 183 LEAKLNEPVKP-----LIIGKEIIHVDHEVSATKQSSCCSR 218
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 174/220 (79%), Positives = 194/220 (88%), Gaps = 1/220 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DSYDEECDYLFKAV+IGDSAVGKSNLLSRF+RDEFRLDSKPTIGVEFAYRNIRVGDKL
Sbjct: 1 MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKL 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATF+N KKWL ELR+F SS M +
Sbjct: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
VLVGNKSD++H REV+E++GK LAETE LYFMETSA++NLNVE+AF+QMI +IH+ QK
Sbjct: 121 VLVGNKSDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SL AK N+ T S L GKE+INID EV+ATKQ+S C
Sbjct: 181 SLEAKKNE-TTISTIKALPVGKEVINIDDEVSATKQASYC 219
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/210 (77%), Positives = 179/210 (85%), Gaps = 1/210 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MGDSYDEECDYLFKAV+IGDSAVGKSNLLSRF+RDEFRLDSKPTIGVEFAYRNIRV DKL
Sbjct: 1 MGDSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKL 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATF+N KKWL ELRE+ + M +
Sbjct: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
VL GNK DL+H+REV EEEGK LAETEGL FMETSA++NLNVE+AFL+MI +IH T QK
Sbjct: 121 VLAGNKCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQK 180
Query: 181 SLCAKMND-KTATSNCNNLGGGKEIINIDH 209
SL ++ D TS L GKE++ ID
Sbjct: 181 SLEVRLKDANNITSKTVALPVGKEVLIIDE 210
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 325 bits (834), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 164/227 (72%), Positives = 186/227 (81%), Gaps = 8/227 (3%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+SYDEECDYLFKAV+IGDSAVGKSNLLSRF+RDEFRLDSKPTIGV+FAYRN+RVGDK IK
Sbjct: 4 ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQERFRAITSSYYRGALGALL+YDITRR TF+N +KWL ELR F S +VL
Sbjct: 64 AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK-S 181
VGNKSDL SREV EEEGK LAE+EGLYF+ETSA++N NVE+AFL MI +IH+ QK
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183
Query: 182 LCAKMN-DKTATSNCNNLGGGKEIINIDHEVTATKQ-----SSCCYK 222
L ++N D SN + GKEI+NI HEVTAT+ S+CCYK
Sbjct: 184 LDNRLNGDGNNESNGAVVPPGKEIVNI-HEVTATRPLSTSLSNCCYK 229
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 325 bits (833), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 164/227 (72%), Positives = 186/227 (81%), Gaps = 8/227 (3%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+SYDEECDYLFKAV+IGDSAVGKSNLLSRF+RDEFRLDSKPTIGV+FAYRN+RVGDK IK
Sbjct: 4 ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQERFRAITSSYYRGALGALL+YDITRR TF+N +KWL ELR F S +VL
Sbjct: 64 AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK-S 181
VGNKSDL SREV EEEGK LAE+EGLYF+ETSA++N NVE+AFL MI +IH+ QK
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183
Query: 182 LCAKMN-DKTATSNCNNLGGGKEIINIDHEVTATKQ-----SSCCYK 222
L ++N D SN + GKEI+NI HEVTAT+ S+CCYK
Sbjct: 184 LDNRLNGDGNNESNGAVVPPGKEIVNI-HEVTATRPLGTSLSNCCYK 229
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 157/231 (67%), Positives = 186/231 (80%), Gaps = 12/231 (5%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D+Y+EECDYLFKAV+IGDSAVGKSNLLSRF++DEFR DSKPTIGVEFAYRN+ VGDK+IK
Sbjct: 4 DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQERFRAITSSYYRGALGALL+YDITRR TF+N KKWL ELR+F + +VL
Sbjct: 64 AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL SREV E+EGK LAE+EGLYF+ETSA++N+NVE+AFL MI +IH+ Q+
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183
Query: 183 CAKMNDKTATSNCNNLGG------GKEIINIDHEVTATKQ-----SSCCYK 222
++ AT + N G GKEI+NI HEVTAT+ S+CC+K
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNI-HEVTATQPLLSSSSNCCFK 233
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 157/230 (68%), Positives = 187/230 (81%), Gaps = 11/230 (4%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
DSY+EECDYLFKAV+IGDSAVGKSNLLSRF++DEFR DSKPTIGVEFAYRN+ VGDK+IK
Sbjct: 4 DSYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQERFRAITSSYYRGALGALL+YDITRR TF+N KKWL ELR+F + +VL
Sbjct: 64 AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL SREV E+EGK LAE+EGL+F+ETSA++N+NVE+AFL MI +IH+ Q+
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLFFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183
Query: 183 CAKMNDKTATSNCNNLGG------GKEIINIDHEVTATKQ----SSCCYK 222
++ AT++ N G GKEI+NI HEVTAT+ S+CC+K
Sbjct: 184 SDNKSNGAATAHINGNGNGTVLPVGKEIVNI-HEVTATQPLSSSSNCCFK 232
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/221 (73%), Positives = 185/221 (83%), Gaps = 7/221 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D++DEECDYLFKAV+IGDS VGKSNLLSRFA+DEFRLDSKPTIGVEFAYRNI+VGDKL
Sbjct: 1 MADAFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKL 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQERFRAITSSYYRGALGA+LVYDI+RR+++EN KWL ELREF M +
Sbjct: 61 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVV 120
Query: 121 VLVGNKSDLT-HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
VLVGNK DL SREV++EEGK AETEGL FMETSA++NLNVE+ FLQMI +I+ T Q
Sbjct: 121 VLVGNKCDLDGQSREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQ 180
Query: 180 KSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K+L AKM++K NL GKE I+I EVTATKQSS C
Sbjct: 181 KNLAAKMDEKPI-----NLLNGKE-IHIADEVTATKQSSTC 215
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/220 (72%), Positives = 182/220 (82%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D++DEECDYLFKAV+IGDS VGKSN+LSRFA+DEFRLDSKPTIGVEFAYRNIRVGDKL
Sbjct: 1 MADAFDEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKL 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQERFRAITSSYYRGALGA+LVYDI+ R+++EN KWL ELREF M +
Sbjct: 61 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
VLVGNK DL SREV +EEGK AETEGL FMETSA++NLNVE+ FLQMI +I+ T QK
Sbjct: 121 VLVGNKCDLDESREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L AKM ++ NL GKE I+I EVTATKQ+S C
Sbjct: 181 NLAAKMEEQPI-----NLLNGKE-IHIADEVTATKQTSTC 214
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 319 bits (817), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/227 (70%), Positives = 179/227 (78%), Gaps = 8/227 (3%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+SYDEECDYLFKAV+IGDSAVGKSNLLSRF+RDEFRLDSKPTIGV+FAYRN+RVGDK IK
Sbjct: 4 ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQERFRAITSSYYRGALGALL+YDITRR TF+N KWL ELR F S +VL
Sbjct: 64 AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETVVVL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL SREV EEEGK LAE+EGLYF+ETSA++N NVE+AFL MI +IH+ QK+
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKTA 183
Query: 183 C--AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSS-----CCYK 222
D SN + KEI+NI HE TAT+ S CCYK
Sbjct: 184 VDNRPNGDGNNESNGAVIPPSKEIVNI-HEFTATRPLSTSLPNCCYK 229
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 158/220 (71%), Positives = 179/220 (81%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
+ D++DE+CDYLFKAV+IGDS VGKSNL+SRFA+DEFRLDSKPTIGVEFAYRNI+V DKL
Sbjct: 3 VADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKL 62
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQERFRAITSSYYRGALGA+LVYDIT+RATF N KWL ELREF M +
Sbjct: 63 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVV 122
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
VLVGNKSDL SR+V EEGK++AETE L FMETSA+QNLNV++AFL+MI +IH QK
Sbjct: 123 VLVGNKSDLDQSRQVEREEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQK 182
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SL KMN NL GKE I+I EVTATKQ+ C
Sbjct: 183 SLETKMN-----GTALNLPSGKE-IHIADEVTATKQAKYC 216
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/220 (71%), Positives = 178/220 (80%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
+ D++DE+CDYLFKAV+IGDS VGKSNL+SRFA+DEFRLDSKPTIGVEFAYRNI+V DKL
Sbjct: 3 VADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKL 62
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQERFRAITSSYYRGALGA+LVYDIT+RATF N KWL ELREF M +
Sbjct: 63 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVV 122
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
VLVGNKSDL SR+V EEGK+ AETE L FMETSA+QNLNV++AFL+MI +IH QK
Sbjct: 123 VLVGNKSDLDQSRQVEREEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQK 182
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SL KMN NL GKE I+I EVTATKQ+ C
Sbjct: 183 SLETKMN-----GTALNLPSGKE-IHIADEVTATKQAKYC 216
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 151/204 (74%), Positives = 170/204 (83%), Gaps = 2/204 (0%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+SYDEECDYLFKAV+IGDSAVGKSNLLSRF+RDEFRLDSKPTIGV+FAYRN+RVGDK IK
Sbjct: 4 ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQERFRAITSSYYRGALGALL+YDITRR TF+N +KWL ELR F S +VL
Sbjct: 64 AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK-S 181
VGNKSDL SREV EEEGK LAE+EGLYF+ETSA++N NVE+AFL MI +IH+ QK
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183
Query: 182 LCAKMN-DKTATSNCNNLGGGKEI 204
L ++N D SN + GKEI
Sbjct: 184 LDNRLNGDGNNESNGAVVPPGKEI 207
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 153/222 (68%), Positives = 173/222 (77%), Gaps = 9/222 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DS DE+CDYLFKAV+ GDS VGKSNLLSRF+++EFR DS+PTIGVEFAYRNI+V DKL
Sbjct: 1 MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+K QIWDTAGQERFRAITSSYYRGALGALLVYDITR ATF+N KKWLRELREF + M I
Sbjct: 61 VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNK DL SREV EEE + LAE E L+FMETSA NLNVE+AFL+M+ +IH QK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
Query: 181 S--LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ L K A N GKEII+I HEVT TK +S C
Sbjct: 181 TLDLHKKFEKLVAFPN------GKEIISI-HEVTPTKHNSNC 215
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 178/221 (80%), Gaps = 5/221 (2%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
D++DE+CDYLFKAV+IGDS VGKSNL+SRFA+DEFRLDSKPTIGVEFAYRNI+V DKLI
Sbjct: 3 ADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLI 62
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRAITSSYYRGALG +LVYDITRR TF N KWL ELREF + M +V
Sbjct: 63 KAQIWDTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMVVV 122
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LV NKSDL SREV +EEG+ AE EGL FMETSA+QNLNVE+AFL+MI +IH QKS
Sbjct: 123 LVANKSDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQKS 182
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCCYK 222
L KMN T S + GKE I + EVTATKQ++CC +
Sbjct: 183 LETKMNGPTTLS----VPIGKE-IQVADEVTATKQANCCSR 218
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/216 (71%), Positives = 174/216 (80%), Gaps = 6/216 (2%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
++EECDYLFKAV+IGDS VGKSNLLSRFA+DEFRLDSKPTIGVEFAYRNI+V DKLIKAQ
Sbjct: 8 FEEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 67
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQERFRAITSSYYRGALGALLVYDITRR+++E+ +WL ELREF M ++LVG
Sbjct: 68 IWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVG 127
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK DL SREV EEE K AE EGL FMETSA++NLNVE FLQMI I T Q+SL A
Sbjct: 128 NKCDLGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDA 187
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
KM++ NL GKE I+I EVTATKQ+ CC
Sbjct: 188 KMDETPI-----NLSNGKE-IHIADEVTATKQAPCC 217
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/221 (68%), Positives = 172/221 (77%), Gaps = 8/221 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIR-VGDK 59
+ D++DE CDYLFK V IG+S VGKSNL+SRFA+DEFRLDSKP+IGVEFAY NI+ V DK
Sbjct: 3 VADAFDEHCDYLFK-VXIGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVRDK 61
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
LIKAQIWDTAGQERFRAITSSYYRGALGA+LVYDIT+RATF N KWL ELREF M
Sbjct: 62 LIKAQIWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMV 121
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
+VLV NKSDL SR+V E+GK AETEGL FMETSA+QNLNV++AF +MI +IH Q
Sbjct: 122 VVLVRNKSDLDQSRQVEREKGKGFAETEGLCFMETSALQNLNVDEAFXEMITKIHDIISQ 181
Query: 180 KSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
KSL KMN NL GKE I+I EVTATKQ+ C
Sbjct: 182 KSLETKMNGAAL-----NLPSGKE-IHIADEVTATKQAKYC 216
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/214 (71%), Positives = 174/214 (81%), Gaps = 5/214 (2%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
+DEECDYLFKAV+IGDS VGKSNLLSRFA+DEFRLDSKPTIGVEFAYRNI+V DKLIKAQ
Sbjct: 7 FDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQ 66
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQERFRAITSSYYRGALGALLVYDITRR+++E+ +WL ELREF M ++LVG
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVG 126
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK DL SREV EEE K AE EGL FMETSA++NLNVE FLQMI I T Q+SL A
Sbjct: 127 NKCDLGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDA 186
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSS 218
KM++ + N+L GKE I+I EVTATKQ +
Sbjct: 187 KMDE----TPINHLSNGKE-IHIADEVTATKQKA 215
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/207 (68%), Positives = 160/207 (77%), Gaps = 9/207 (4%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+ GDS VGKSNLLSRF+++EFR DS+PTIGVEFAYRNI+V DKL+K QIWDTAGQERFR
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITSSYYRGALGALLVYDITR ATF+N KKWLRELREF + M I+LVGNK DL SREV
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS--LCAKMNDKTATS 193
EEE + LAE E L+FMETSA NLNVE+AFL+M+ +IH QK+ L K A
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180
Query: 194 NCNNLGGGKEIINIDHEVTATKQSSCC 220
N GKEII+I HEVT TK +S C
Sbjct: 181 N------GKEIISI-HEVTPTKPNSNC 200
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 163/216 (75%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE+ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V KL+KAQI
Sbjct: 6 DEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDITR T+EN ++WL+EL++ S + ++LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVVMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V+ E+G+ +E EGLYFMETSA+++ NVE+AF Q++ QI++ +K+L
Sbjct: 126 KSDLRHLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKALDVG 185
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+ A + + GGK+ +VTATK+ CC
Sbjct: 186 EDPSAAPAKGQTINVGGKD------DVTATKKVGCC 215
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 161/220 (73%), Gaps = 7/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K+
Sbjct: 1 MAYKVDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKM 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDITR TFEN ++WL+ELR+ + +
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V+ E+ + AE EGLYF+ETSA+++ NVE+AF Q++ QI++ +K
Sbjct: 121 MLVGNKSDLRHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L ++ A + IN+ +VTATK+ CC
Sbjct: 181 ALDVSEDNAAAPPQG-------QTINVKDDVTATKKVGCC 213
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 161/215 (74%), Gaps = 8/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE+ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+ VGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E YFMETSA+++LNVE+AF +++ QI+ +K+L
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSRKAL--D 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ D A L G E IN+ +V+A K+ CC
Sbjct: 185 IGDDPAA-----LPKG-ETINVKDDVSAVKKVGCC 213
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 164/215 (76%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V KLIKAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATFEN ++WL+EL++ S + ++LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVVMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V+ E+G+ +E EGLYFMETSA++++NVE++F Q++ QI++ +K+L
Sbjct: 126 KSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVG 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D +A G G+ I +VTATK+ CC
Sbjct: 186 -EDPSAVP-----GKGQTINVSKDDVTATKKVGCC 214
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 155/215 (72%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R++ V DK+IKAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN + WL+ELR + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+ K AE E LYFMETSA++ NVE+AF +++ QIH +K++
Sbjct: 127 KSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAM--- 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A S N+ + I+I +V+A K+ CC
Sbjct: 184 ----EAASESANVPSKGDKIDIGKDVSAVKKGGCC 214
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 163/220 (74%), Gaps = 8/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG + DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++R+ DKL
Sbjct: 1 MG-AVDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKL 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYD TR TFEN ++WL+ELR+ + + I
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNK+DL H + V+ EE AE E +YFMETSA+++LNV++AF++++ QI+ +K
Sbjct: 120 MLVGNKADLKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L K N + + GK+ +V+ K+S CC
Sbjct: 180 TL-EKENGSASVPKGETINIGKD------DVSDVKKSGCC 212
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ S + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ K AE E +FMETSA+++LNVE+AF +++ QI++ +K+L
Sbjct: 127 KADLRHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A + GK+ +V+A K+ CC
Sbjct: 187 -DDPAALPKGQTINVGKD------DVSAVKKVGCC 214
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 163/217 (75%), Gaps = 6/217 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE+ DYLFK V+IGDS VGKSNLLSRF R+EF L++K TIGVEFA R++ V KL+KAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ EE AE E +YFMETSA+++LNV++AF++++ QI+ +K+L
Sbjct: 124 KADLRHLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLETV 183
Query: 186 MNDKTATSNCNNLGGGKEII--NIDHEVTATKQSSCC 220
+D + + L G+ I+ D +V+A K+S CC
Sbjct: 184 DDDPSTKA----LPKGETIVIGTKDDDVSAVKKSGCC 216
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 163/215 (75%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V KLIKAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+EL++ S + ++LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVVMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V+ E+G+ +E EGLYFMETSA++++NVE++F Q++ QI++ +K+L
Sbjct: 126 KSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVG 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D +A G G+ I +VTATK+ CC
Sbjct: 186 -EDPSAVP-----GKGQTINVSKDDVTATKKVGCC 214
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 163/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ + AE E +FMETSA+++LNVE+AF +++ QI+ +K+L +
Sbjct: 127 KADLRHLRAVSTEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSKKAL--E 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+S CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSRDDVSAVKKSGCC 215
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 161/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++W+REL++ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ K AE E +FMETSA++ +NVEDAF +++ QI++ +K+L
Sbjct: 126 KADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+D A + GGK+ +V+A K+S+CC
Sbjct: 186 -DDPAAPPKGQTINVGGKD------DVSAVKKSACC 214
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+++V K++KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATFEN ++WL+ELR+ + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V +EGK AE E LYFMETSA+++ NVEDAF +++ QI++ ++++ A
Sbjct: 128 KSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKRAVEAG 187
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + G E IN+ +V+A K+ CC
Sbjct: 188 EDSASGP-------GKGEKINMKDDVSAVKKGGCC 215
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 158/215 (73%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ S + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ AE E +FMETSA+++LNVE+AF +++ QIH+ +K+L
Sbjct: 127 KADLRHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSRKALDVG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A + GK+ +V+A K+ CC
Sbjct: 187 -DDPAALPKGQTITVGKD------DVSAVKKVGCC 214
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 163/220 (74%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R +++ K
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLV+DIT+R TF+N ++WLRELR+ + + +
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+G +E EGL F+ETSA++ +NVE AF ++++IHQ +K
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ ++A++N ++ G IN+ ATK SCC
Sbjct: 181 ALAAQ---ESASTNGRSMQG--TTINVAEAPAATK-GSCC 214
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 162/215 (75%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NV++AF +++NQI+ +K++ +
Sbjct: 127 KSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAM--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D A S + G E I+++ +V+A K+ CC
Sbjct: 185 TGDNAAASAVPSKG---EKIDVNKDVSAMKRVGCC 216
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 162/215 (75%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NV++AF +++NQI+ +K++ +
Sbjct: 127 KSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAM--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D A S + G E I+++ +V+A K+ CC
Sbjct: 185 TGDNAAASAVPSKG---EKIDVNKDVSAKKRVGCC 216
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 159/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V DK+IKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVIKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+GK AE E YFMETSA+++ NVE+AF ++++QI++ +K+L
Sbjct: 126 KADLRHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKALDVG 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ S + G + +VTA K+ CC
Sbjct: 186 EDPAAVPSKGQTIHVGNK-----DDVTAMKKVGCC 215
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++W+REL++ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++++NVE+AF +++ QI+ +K+L
Sbjct: 126 KADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+D A + GGK+ +V+A K+S+CC
Sbjct: 186 -DDPAAPPKGQTINVGGKD------DVSAVKKSACC 214
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ S + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++++NVE+AF +++ QI++ +K+L
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--D 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+ CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGTKDDVSAVKKVGCC 215
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 162/220 (73%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S DE+ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++R+ DK
Sbjct: 1 MGTS-DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GAL+VYD+TR+ TFEN ++WL+ELR+ + + I
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNK+DL H R V EE AE E YFMETSA+++LNV++AF++++++I+ +K
Sbjct: 120 MLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L K ND A + G +V+A K+ CC
Sbjct: 180 TL-EKGNDPGALPQGQTINLG--------DVSAVKKPGCC 210
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 161/222 (72%), Gaps = 9/222 (4%)
Query: 1 MGDSYDEE--CDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD 58
M Y EE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+++V
Sbjct: 1 MAAGYREEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDG 60
Query: 59 KLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCM 118
K++KAQIWDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WL+ELR+ +
Sbjct: 61 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNI 120
Query: 119 AIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
++LVGNKSDL H V +EGK AE E LYFMETSA+++ NVE+AF +++ QI++
Sbjct: 121 VVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVS 180
Query: 179 QKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++S+ A + + G E INI +V+A K+ CC
Sbjct: 181 KRSV-------EAGDDAGSGPGKGEKINIKDDVSAVKKGGCC 215
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 164/220 (74%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA RN+++ K
Sbjct: 130 MAHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKT 189
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ +F++ ++WLRELR + + +
Sbjct: 190 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVV 249
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+G+ +E EGL F+ETSA++ +NVE AF ++++IHQT +K
Sbjct: 250 MMVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKK 309
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ +A++N ++ G IN+ T TK SCC
Sbjct: 310 ALAAQA---SASTNGRSMQG--TTINVAESSTVTK-GSCC 343
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+++V K++KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WL+ELR+ + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V +EGK AE E LYFMETSA+++ NVE+AF +++ QI++ ++S+
Sbjct: 128 KSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSV--- 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A + + G E INI +V+A K+ CC
Sbjct: 185 ----EAGDDAGSGPGKGEKINIKDDVSAVKKGGCC 215
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 162/217 (74%), Gaps = 6/217 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE+ DYLFK V+IGDS VGKSNLLSRF R+EF L++K TIGVEFA R++ V KL+KAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ EE AE E +YFMETSA+++LNV +AF++++ QI+ +K+L
Sbjct: 124 KADLRHLRAVSTEEATEYAEKENIYFMETSALESLNVGNAFVEVLTQIYNVVSRKTL-ET 182
Query: 186 MNDKTATSNCNNLGGGKEII--NIDHEVTATKQSSCC 220
M+D N L G+ I+ D +V+A K+S CC
Sbjct: 183 MDDD---PNSKALPKGETIVIGTKDDDVSAVKKSGCC 216
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 162/215 (75%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R++ V K++KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE++F +++ QI+ +K++ A
Sbjct: 127 KSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSKKAMEA- 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D TA ++ G E I++ +V+A K++ CC
Sbjct: 186 -GDGTAAASVPPKG---EKIDVSKDVSAVKKAGCC 216
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 159/215 (73%), Gaps = 9/215 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V +K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+ K AE E LYFMETSA+++ NVE+AF +++ QI+ +K++
Sbjct: 127 KSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAM--- 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A + N+ E I++D V+A K++ CC
Sbjct: 184 ----EAGEDSGNVPSKGEKIDVD--VSAVKKTGCC 212
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 159/215 (73%), Gaps = 9/215 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V +K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+ K AE E LYFMETSA+++ NVE+AF +++ QI+ +K++
Sbjct: 127 KSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAM--- 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A + N+ E I++D V+A K++ CC
Sbjct: 184 ----EAGQDSGNVPSKGEKIDVD--VSAVKKTGCC 212
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 161/215 (74%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+I+V K++KAQI
Sbjct: 12 EDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQI 71
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATF+N +WL+ELR+ + ++LVGN
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGN 131
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA+ NVE+AF +++ QI+QT +K++
Sbjct: 132 KSDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTV--- 188
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A+ + +N E IN+ +V+A K+ CC
Sbjct: 189 ----EASDDGSNAPIKGEKINVKDDVSALKRIGCC 219
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 162/216 (75%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V KLIKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDITR TFEN ++WL+EL++ S + ++LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KS L H R V+ ++G+ +E EGL+FMETSA+++ NVE+AF Q++ QI++ +K+L
Sbjct: 126 KSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVSKKALDVG 185
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
D +A G G+ I + +VTATK+ CC
Sbjct: 186 -EDPSAVP-----GKGQTISVGNKDDVTATKKVGCC 215
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 159/216 (73%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++W+RELR+ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ K AE E +FMETSA++ +NVE AF +++ QI+ +K+L
Sbjct: 126 KADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+D A + GGK+ +V+A K+S+CC
Sbjct: 186 -DDPAAPPRGQTISVGGKD------DVSAVKKSACC 214
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 160/216 (74%), Gaps = 1/216 (0%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
+D + DY+FK V+IGDSAVGKS LLSRFARDEF L+SK TIGVEF R I V K IKAQ
Sbjct: 4 FDVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQ 63
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYDITR+ TFE+ +WL ELR + + I++VG
Sbjct: 64 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVG 123
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NKSDL++SR ++ EEG+ +E EGLYFMETSA+ + NVE AF ++ +I++ +KSL A
Sbjct: 124 NKSDLSNSRAMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAA 183
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + + G +I+ +D E+TA K+ +CC
Sbjct: 184 DDPNGGLANVMPPVPSGNKIL-LDDELTAVKKRACC 218
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 160/216 (74%), Gaps = 1/216 (0%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
+D + DY+FK V+IGDSAVGKS LLSRFARDEF L+SK TIGVEF R I V K IKAQ
Sbjct: 4 FDVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQ 63
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYDITR+ TFE+ +WL ELR + + I++VG
Sbjct: 64 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVG 123
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NKSDL++SR ++ EEG+ +E EGLYFMETSA+ + NVE AF ++ +I++ +KSL A
Sbjct: 124 NKSDLSNSRTMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAA 183
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + + G +I+ +D E+TA K+ +CC
Sbjct: 184 DDPNGGLANVMPPVPSGNKIL-LDDELTAVKKRACC 218
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 161/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ S + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL H V+ ++ K AE E +FMETSA++++NVE+AF +++ QI+Q +K+L
Sbjct: 127 KGDLRHLXAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKAL--D 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K++ CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGTKDDVSAVKKAGCC 215
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++W+RELR+ + + ++LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ K AE + +FMETSA++ +NVEDAF +++ QI++ +K+L
Sbjct: 126 KADLRHLRAVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+D A + + GGK+ +V+A K+S+CC
Sbjct: 186 -DDPAAPPRGHTINVGGKD------DVSAVKKSACC 214
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 163/215 (75%), Gaps = 8/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++++NVE+AF +++ QI++ +K+L +
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ D + L G + IN+ +V+A K+ CC
Sbjct: 185 VGD-----DPGALPKG-QTINVKDDVSAVKKVGCC 213
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 160/215 (74%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLL+RF R+EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WLREL++ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ K AE E +FMETSA++ +NVEDAF ++++QI++ +K+L
Sbjct: 126 KADLRHLRAVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A + G + +V+A K+S+CC
Sbjct: 186 -DDPAAPPKGKTISVGSK-----DDVSAVKKSACC 214
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 113 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 172
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 173 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 232
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++++NVE AF +++ QI++ +K+L
Sbjct: 233 KADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIG 292
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+D A + GGK+ +V+A K+S CC
Sbjct: 293 -DDPAAPPRGQTINVGGKD------DVSAVKKSGCC 321
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+++V K++KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WL+ELR+ + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V +EGK AE E LYFMETSA+++ NVE+AF +++ QI++ ++++ A
Sbjct: 128 KSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRAVEAG 187
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + G E INI +V+A K+ CC
Sbjct: 188 EDAASGP-------GKGEKINIKDDVSAVKKGGCC 215
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 164/220 (74%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA RN+++ K
Sbjct: 1 MAHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ +F++ ++WLRELR + + +
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+G+ +E EGL F+ETSA++ +NVE AF ++++IHQT +K
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ +A++N ++ G IN+ T TK SCC
Sbjct: 181 ALAAQA---SASTNGRSMQG--TTINVAESSTVTK-GSCC 214
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++++NVE AF +++ QI++ +K+L
Sbjct: 126 KADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+D A + GGK+ +V+A K+S CC
Sbjct: 186 -DDPAAPPRGQTINVGGKD------DVSAVKKSGCC 214
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 161/215 (74%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLL+RF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+EL++ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++++NVEDAF +++ QI++ +K+L
Sbjct: 126 KADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A + G + +V+A K++ CC
Sbjct: 186 -DDPAAPPRGQTINVGSK-----DDVSAVKKAGCC 214
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 157/219 (71%), Gaps = 6/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHRMDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ TFEN ++WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+G+ LAE EGL F+ETSA++ LNVE AF +++ IHQ +K
Sbjct: 121 MMVGNKSDLNHLRSVAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A+ + A S G INI TK+ C
Sbjct: 181 ALAAQ---EAAGSGPPGQG---TTINIADPSANTKRGCC 213
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 161/216 (74%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V KLIKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDITR TFEN ++WL+EL++ S + ++LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KS L H R V+ ++G+ +E EGL+FMETSA+++ NVE+AF Q+ QI++ +K+L
Sbjct: 126 KSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVSKKALDVG 185
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
D +A G G+ I + +VTATK+ CC
Sbjct: 186 -EDPSAVP-----GKGQTISVGNKDDVTATKKVGCC 215
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 161/220 (73%), Gaps = 8/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+EE+G+ LAE EGL F+ETSA++ +N+E AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ +NL G IN+ + +A ++ SCC
Sbjct: 181 ALAAQ-------EASSNLPGQGTTINV-ADASANQRRSCC 212
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE AF +++ QI+ +K++ +
Sbjct: 127 KSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVSKKAM--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A S + G E I++ +V+A K+ CC
Sbjct: 185 TSDDGAASAVPSKG---EKIDVGKDVSAMKKGGCC 216
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 160/215 (74%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ AE E +FMETSA++++NVE+AF +++ QI++ +K+L
Sbjct: 127 KADLRHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKALEIG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D TA + G +V+A K+S CC
Sbjct: 187 -DDPTALPKGQTIDVGSR-----DDVSAVKKSGCC 215
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 505 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQI 564
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ S + I+LVGN
Sbjct: 565 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGN 624
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL H R V+ ++ K AE E +FMETSA++++NVE+AF +++ QI+Q +K+L
Sbjct: 625 KGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKAL--D 682
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K++ CC
Sbjct: 683 IGDDPAA-----LPKGQTINVGTKDDVSAVKKAGCC 713
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++ +NVE+AF +++ QI++ +K+L
Sbjct: 126 KADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+D A + GGK+ +V+A K++ CC
Sbjct: 186 -DDPAAPPRGQTINVGGKD------DVSAVKKAGCC 214
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 159/215 (73%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ S + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ + AE E +FMETSA+++LNVE+AF +++ QI++ +K+L
Sbjct: 127 KADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D A + G + +V+A K+ CC
Sbjct: 187 -EDPAALPKGQTINVGNK-----DDVSAMKKVGCC 215
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 161/215 (74%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NV+ AF +++ QI++ +K++ +
Sbjct: 127 KSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSKKAM--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ A S + G E I++ +V+A K+ CC
Sbjct: 185 TGDEAAASAVPSKG---EKIDVSKDVSAMKRVGCC 216
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 156/219 (71%), Gaps = 6/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R +++ K
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ TFEN ++WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+G+ LAE EGL F+ETSA++ LNVE AF ++ IHQ +K
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A+ + A S G IN+ TK+ C
Sbjct: 181 ALAAQ---EAAGSGPPTQG---TTINVTDSAVNTKRGCC 213
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE AF +++ QI+ +K++ +
Sbjct: 127 KSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKKAM--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A S + G E I++ +V+A K+ CC
Sbjct: 185 TSDDGAASAVPSKG---EKIDVGKDVSAMKKGGCC 216
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 153/215 (71%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLS F ++EF L+SK TIGVEFA R++ V DK+IKAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN + WL+ELR + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+ K AE E LYFMETSA + NVE+AF +++ QIH +K++
Sbjct: 127 KSDLRHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVSKKAM--- 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A S N+ + I+I +V+A K+ CC
Sbjct: 184 ----EAASESANVPSKGDKIDIGKDVSAVKKGGCC 214
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE AF +++ Q++ +K++ +
Sbjct: 127 KSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVSKKAM--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A S + G E I++ +V+A K+ CC
Sbjct: 185 TSDDGAASAVPSKG---EKIDVGKDVSAMKKGGCC 216
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 30 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 89
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 90 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 149
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++++NVE AF +++ QI++ +K+L
Sbjct: 150 KADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIG 209
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+D A + GGK+ +V+A K+S CC
Sbjct: 210 -DDPAAPPRGQTINVGGKD------DVSAVKKSGCC 238
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 157/215 (73%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ S + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ AE E +FMETSA+++LNVE+AF +++ QI+ +K+L
Sbjct: 127 KADLRHLRAVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSRKALDVG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A + GK+ +V+A K+ CC
Sbjct: 187 -DDPAALPKGQTINVGKD------DVSAVKKVGCC 214
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 161/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+ VGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++++NVE+AF ++++QI++ +K+L
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKAL--D 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+ CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSKDDVSAVKKVGCC 215
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 161/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++ +NVE AF +++ QI++ +K+L
Sbjct: 126 KADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+D A + GGK+ +V+A K++ CC
Sbjct: 186 -DDPAAPPRGQTINVGGKD------DVSAVKKAGCC 214
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+++V K++KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WL+ELR+ + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V +EGK AE E LYFMETSA+++ NVE+AF +++ QI++ ++++ A
Sbjct: 128 KSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKRAVEAG 187
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + G E INI +V+A K+ CC
Sbjct: 188 EDAASGP-------GRGEKINIKDDVSAVKKGGCC 215
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 162/215 (75%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NV++AF +++ QI++ +K++ +
Sbjct: 127 KSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAM--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ A S + G E I++ +V+A K+ CC
Sbjct: 185 TGDEGAASAVPSKG---EKIDVSKDVSAMKRVGCC 216
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 160/215 (74%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLL+RF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+EL++ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++ +NVEDAF +++ QI++ +K+L
Sbjct: 126 KADLRHLRAVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A + G + +V+A K++ CC
Sbjct: 186 -DDPAAPPRGQTINVGSK-----DDVSAVKKAGCC 214
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 163/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN +KWL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ ++ K AE E +FMETSA+++LNV++AF +++ QI++ +K+L +
Sbjct: 127 KADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTL--E 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+S CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSRDDVSAVKKSGCC 215
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+++V K++KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WL+ELR+ + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V +EGK AE E LYFMETSA+++ NVE+AF +++ QI++ ++++
Sbjct: 128 KSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKRAV--- 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A + + G E INI +V+A K+ CC
Sbjct: 185 ----EAGEDAASGPGRGEKINIKDDVSAVKKGGCC 215
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 163/215 (75%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFKAV+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+++V K++KAQI
Sbjct: 12 EDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQI 71
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATF+N +WL+ELR+ S + ++LVGN
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSSIVVMLVGN 131
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+G+ AE E LYFMETSA+ NV++AF +++ QI++ +K++ A
Sbjct: 132 KSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKTVDAG 191
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +A S N IN+ +V++ K++ CC
Sbjct: 192 DDGSSAPSKGEN-------INVKDDVSSLKRAGCC 219
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 146/185 (78%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R +++ K
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ TFEN ++WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+G+ LAE EGL F+ETSA++ LNVE AF +++ IHQ +K
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKK 180
Query: 181 SLCAK 185
+L A+
Sbjct: 181 ALAAQ 185
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 161/215 (74%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA +++ + +K+IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR T+EN +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ +E K LAE EGLYFMETSA++ NVE+AF + + QI++ +K++ A
Sbjct: 127 KSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEA- 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ ATS+ G E INI E ++ K+ CC
Sbjct: 186 -GDEGATSSAPPKG---ETINIKDEGSSWKKFGCC 216
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 161/215 (74%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 8 EDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYDITR TFEN ++WL+ELR+ + I+LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA+++LNVE+AF +++ +I++ +K+L
Sbjct: 128 KADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVG 187
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A + GK+ +V+A K+ CC
Sbjct: 188 -DDPAALPKGQTINVGKD------DVSAVKKVGCC 215
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 161/215 (74%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NV++AF +++ QI++ +K++ A
Sbjct: 127 KSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMEA- 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D A S + G E I++ +V+A K+ CC
Sbjct: 186 -GDDGAASAVPSKG---EKIDVGKDVSAMKRVGCC 216
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 161/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ S + I+ VGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++++NVE+AF ++++QI++ +K+L
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKAL--D 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+ CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSKDDVSAVKKVGCC 215
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE +F +++ QI+ +K++ +
Sbjct: 127 KSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISKKAM--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A S + G E I++ +V+A K+ CC
Sbjct: 185 TSDDGAASAVPSKG---EKIDVGKDVSAMKKGGCC 216
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 145/185 (78%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R +++ K
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ TFEN +WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+G+ LAE EGL F+ETSA++ LNVE AF +++ IHQ +K
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKK 180
Query: 181 SLCAK 185
+L A+
Sbjct: 181 ALAAQ 185
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 160/221 (72%), Gaps = 6/221 (2%)
Query: 1 MGDSYDEE-CDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
MG S E+ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K
Sbjct: 1 MGTSSSEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
+IKAQIWDTAGQER+RAITS+YYRGA+GALLVYD+TR ATFEN +WL+ELR +
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
++LVGNKSDL H V+ E+GK AE E LYFMETSA++ NVE+AF +++ QI++ +
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 180 KSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
KS+ + D+ A S+ G E IN+ + +A K+ CC
Sbjct: 181 KSV--EGGDEGAASSVPAKG---ERINVKDDASALKRVGCC 216
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 163/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ ++ K AE E +FMETSA+++LNV++AF +++ QI++ +K+L +
Sbjct: 127 KADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTL--E 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+S CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSRDDVSAVKKSGCC 215
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/219 (56%), Positives = 156/219 (71%), Gaps = 6/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R +++ +
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ TFEN ++WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+G+ LAE EGL F+ETSA++ LNVE AF ++ IHQ +K
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A+ + A S G IN+ TK+ C
Sbjct: 181 ALAAQ---EAAGSGPPTQG---TTINVTDSAVNTKRGCC 213
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 159/215 (73%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR+ATFEN +WL+ELR + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE+AF +++ QI+ +K++
Sbjct: 127 KSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAV--- 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ A + ++ E I++ ++V+A K+ CC
Sbjct: 184 ---EVAENGTTSVPAKGEKIDLKNDVSALKRVGCC 215
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 158/215 (73%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ K AE E +FMETSA++++NVE+AF +++ QI++ +K+L
Sbjct: 127 KADLRHLRAVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDVG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D T + G +V+A K++ CC
Sbjct: 187 -DDSTYLPKGQTINVGSR-----DDVSAVKKAGCC 215
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 70 EDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 129
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++LVGN
Sbjct: 130 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 189
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E L+FMETSA++ NVE+AF +++ QI+ +K+L
Sbjct: 190 KSDLRHLLAVSTEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVSKKAL--- 246
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + +N + + E I++ +V+A K+ CC
Sbjct: 247 --ETSEQANGSAVPSQGEKIDVGKDVSAVKRGGCC 279
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DY FK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DDDYDYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ AE E +FMETSA+++LNVE+AF +++ QI++ +K+L +
Sbjct: 127 KADLRHLRAVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSKKAL--E 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+S CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSRDDVSAVKKSGCC 215
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++++NVE AF +++ QI++ +K+L
Sbjct: 126 KADLRHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
+D A + GGK+ +V+A K++ CC
Sbjct: 186 -DDPAAPPRGQTINVGGKD------DVSAVKKAGCC 214
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 163/220 (74%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + E DYLFK V+IGDS VGKSN+ SRF R+EF L+SK TIGVEFA RN+++ K
Sbjct: 1 MAHRVNNEYDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ +F++ ++WLRELR + + +
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+G+ +E EGL F+ETSA++ +NVE AF ++++IHQT +K
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ +A++N ++ G IN+ T TK SCC
Sbjct: 181 ALAAQA---SASTNGRSMQG--TTINVAESSTVTK-GSCC 214
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 158/215 (73%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLL+RF R+EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+EL++ + + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ K AE E YF ETSA++ +NVEDAF +++ QI++ +K+L
Sbjct: 126 KADLRHLRAVPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVSKKALDIG 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A + G + +V+A K++ CC
Sbjct: 186 -DDPAAPPRGQTINVGSK-----DDVSAVKKAGCC 214
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA +++ + K+IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATFEN +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+GK AE E LYFMETSA++ NVE+AF ++++QI+ +K++ A
Sbjct: 127 KSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSKKAVEA- 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ ++S ++G + IN+ + + K+ CC
Sbjct: 186 -GESGSSSAVPSIG---QTINVKEDSSVFKRFGCC 216
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++R+ DKL+KAQI
Sbjct: 5 DEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H V+ EE AE E +YFMETSA++++NV+ AF++++ QI+ +++L K
Sbjct: 125 KTDLRHLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSKRAL-EK 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N + + G++ +V+ K+S+CC
Sbjct: 184 ENGSASVPKGETINIGRD------DVSEVKKSTCC 212
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA +++ + K+IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATFEN +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+GK AE E LYFMETSA++ NVE+AF ++++QI++ ++++ A
Sbjct: 127 KSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRTVEAG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N A+S+ G + IN+ + + K+ CC
Sbjct: 187 KN---ASSSAVPSKG--QTINVKDDSSVLKKIGCC 216
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 162/215 (75%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFKAV+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+++V K++KAQI
Sbjct: 12 EDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQI 71
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATF+N +WL+ELR+ + ++LVGN
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGN 131
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+G+ AE E LYFMETSA+ NV++AF +++ QI++ +K++ A
Sbjct: 132 KSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKTVDAG 191
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +A S N IN+ +V++ K++ CC
Sbjct: 192 DDGSSAPSKGEN-------INVKDDVSSLKRAGCC 219
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 159/216 (73%), Gaps = 9/216 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+++V K+IKAQI
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQI 70
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATF+N +WLRELR+ + +L+GN
Sbjct: 71 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGN 130
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E +YFMETSA+ NV++AF +++ QI+Q +K + A
Sbjct: 131 KSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAP 190
Query: 186 MNDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
+ + G GK E IN+ +V+A K+ CC
Sbjct: 191 ED--------GSAGPGKGEKINVKDDVSAMKRVGCC 218
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 159/216 (73%), Gaps = 9/216 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+++V K+IKAQI
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQI 70
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATF+N +WLRELR+ + +L+GN
Sbjct: 71 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGN 130
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E +YFMETSA+ NV++AF +++ QI+Q +K + A
Sbjct: 131 KSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAP 190
Query: 186 MNDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
+ + G GK E IN+ +V+A K+ CC
Sbjct: 191 ED--------GSAGPGKGEKINVKDDVSAMKRVGCC 218
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFKAV+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+++V K++KAQI
Sbjct: 13 EDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQI 72
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRR+TF+N +WL+ELR+ + ++LVGN
Sbjct: 73 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIVVMLVGN 132
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+G+ AE E LYFMETSA+ NV++AF +++ QI+Q +K++ A
Sbjct: 133 KSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQIYQIASRKTVDAG 192
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ A S E IN+ +V+A K+ CC
Sbjct: 193 EDGSAAPSK-------GEKINVKDDVSALKRVGCC 220
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 158/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATFEN +WL+ELR + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE+AF +++ QI++ +KS+ +
Sbjct: 127 KSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSV--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ A S+ G E IN+ + +A K+ CC
Sbjct: 185 GGDEGAASSVPAKG---ERINVKDDASALKRVGCC 216
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 161/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE+ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+IRV +K++KAQI
Sbjct: 7 DEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVLKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ EE AE E +FMETSA++++NVE+AF +++ QI+ +K+L +
Sbjct: 127 KADLRHLRAVSTEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSKKAL--E 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+ CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSRDDVSAVKKDGCC 215
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 161/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ AE E +FMETSA+++LNVE AF +++ QI++ +K+L +
Sbjct: 127 KADLRHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKAL--E 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+ CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSRDDVSAVKKGGCC 215
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 159/215 (73%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATFEN +WL+ELR + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE+AF +++ QI++ +K++
Sbjct: 127 KSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAV--- 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ A + ++ E I++ ++V+A K+ CC
Sbjct: 184 ---EGAENGTASVPAKGEKIDLKNDVSALKRVGCC 215
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 157/220 (71%), Gaps = 8/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TFEN +WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V +E+G+ LAE EGL F+ETSA++ N+E AF ++++I+ +K
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ NL G INI + +AT + CC
Sbjct: 181 ALAAQ-------EAAGNLPGQGTAINIS-DSSATNRKGCC 212
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 161/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V + K AE E +FMETSA+++LNV++AF +++ QI++ +K+L +
Sbjct: 127 KADLRHLRAVATNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTL--E 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+S CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSRDDVSAVKKSGCC 215
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 159/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R++ + K+IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +T+EN +KWL+ELR+ + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+ K AETE LYFMETSA++ NV++AF +++ QI+ +K++ +
Sbjct: 127 KSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAM--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
ND A S G E I+I +V+ K+ CC
Sbjct: 185 TNDDAAASAVIAKG---EKIDISKDVSEVKKGGCC 216
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 161/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ +E E YFMETSA+++LNVE AF +++ QI++ +K+L +
Sbjct: 127 KADLRHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSKKAL--E 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K++ CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSRDDVSAVKKAGCC 215
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 162/220 (73%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R +++ K
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLV+DIT+R TF+N ++WLRELR+ + + +
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+ + +E E L F+ETSA++ +NVE AF ++++IHQ +K
Sbjct: 121 MMVGNKSDLNHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ ++A++N ++ G IN+ T TK SCC
Sbjct: 181 ALAAQ---ESASANGRSMQG--TTINVAEPSTNTK-GSCC 214
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 156/215 (72%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATFEN +WL+ELR S + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H V+ E+GK AE E LYFMETSA++ NVE+AF +++ QI+ +K++
Sbjct: 127 KADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKTVEGA 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N + + E I++ ++V+A K+ CC
Sbjct: 187 ENGNAS------VPAKGEKIDLKNDVSALKRVGCC 215
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 157/215 (73%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATFEN +WL+ELR S + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H V+ E+GK AE E LYFMETSA++ NVE+AF +++ QI++ +K++
Sbjct: 127 KADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEGA 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N + + E I++ ++V+A K+ CC
Sbjct: 187 ENGNAS------VPAKGEKIDLKNDVSALKRVGCC 215
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 122/222 (54%), Positives = 158/222 (71%), Gaps = 9/222 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ TFEN ++WL+ELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R+V E + E EGL F+ETSA+++ NVE AF Q++ +I+ +K
Sbjct: 121 MLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINID--HEVTATKQSSCC 220
L ++ N +G G+++I ID H+ K+ CC
Sbjct: 181 VLDSE-------DNRPKIGEGRDVIVIDNAHDDGGKKKGGCC 215
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 159/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V IGDS VGKSNLLSRF R+EF L+SK TIGVEFA +++ + K+IKAQI
Sbjct: 7 DDEYDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDAKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATFEN +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+GK AE E LYFMETSA++ NVE+AF ++++QI++ ++++ A
Sbjct: 127 KSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N A+S+ G + IN+ + + K+ CC
Sbjct: 187 NN---ASSSAVPSKG--QTINVKDDSSVLKKIGCC 216
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 142/174 (81%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG D E YLFK V+IGDS VGKSN+LSRF R+ F LDSK TIGVEFA +++++ K
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R +FEN +WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
++VGNKSDLTH R V+E++GK LAE EGL+F+ETSAM+ +NVE+AF +I +++
Sbjct: 121 MMVGNKSDLTHLRSVSEDQGKALAEKEGLFFLETSAMEAVNVEEAFQTIIAEVY 174
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 158/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA + + V K++KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATFEN +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+GK AE E LYFMETSA++ NVE+AF +++ QI++ ++++ A
Sbjct: 127 KSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEA- 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D ++S + G + IN+ + + K+ CC
Sbjct: 186 -GDSGSSSGLPSKG---QTINVKEDSSVLKRFGCC 216
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 157/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA +++ + K+IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAIT +YYRGA+GALLVYD+TR TFEN +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIVVMLLGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ EE K LAE E LYFMETSA++ NVE+AF + + QI++ +K++ A
Sbjct: 127 KSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSKKAVEA- 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ ATS G + INI E +A K+ CC
Sbjct: 186 -GDEGATSTAPPKG---QTINIKDEGSAWKKFGCC 216
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 158/212 (74%), Gaps = 8/212 (3%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+IRV DK++KAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + ++LVGNK+DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V+ E+ AE E +FMETSA+++LNVE AF +++ QI++ +K+L ++ D
Sbjct: 121 RHLRAVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKAL--EIGDD 178
Query: 190 TATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
A L G+ I + +V+A K+ CC
Sbjct: 179 PAA-----LPKGQTINVGSRDDVSAVKKGGCC 205
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 156/215 (72%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+++V K+IKAQI
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQI 70
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATF+N +WLRELR+ + ++LVGN
Sbjct: 71 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLVGN 130
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ ++ K AE E +YFMETSA+ NV+ +F +++ QI+Q +K++ A
Sbjct: 131 KSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVEAS 190
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A G E IN+ +V+A K+ CC
Sbjct: 191 EEGAAAP-------GKGEKINVKDDVSAMKRVGCC 218
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 4/220 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG D E YLFK V+IGDS VGKSN+LSRF R+ F LDSK TIGVEFA +++++ K
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R +F+N +WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R ++E+EGK LAE EGL+F+ETSAM+ +NVE AF ++ +++ +K
Sbjct: 121 MMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVNRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L AK S L +II+ID TK++ C
Sbjct: 181 ALAAKEAAAATAS----LPSQGKIISIDSTAGNTKRACCS 216
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 162/216 (75%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ ++ K AE E +FMETSA+++LNV+++F +++ QI++ +K+L +
Sbjct: 127 KADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKTL--E 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D A L G+ I + +V+A K+ CC
Sbjct: 185 IGDDPAA-----LPKGQTINVGSRDDVSAVKKVGCC 215
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 157/220 (71%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ T+EN ++WL+ELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V+ ++ + +E EGL F+ETSA+++ NVE AF +++ +I++ +K
Sbjct: 121 MLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L ++ N G G I+ +D K+ CC
Sbjct: 181 ALASEEN------TTEGPGQGTNIVPLDSNAPDLKKKGCC 214
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 141/174 (81%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG D E YLFK V+IGDS VGKSN+LSRF R+ F LDSK TIGVEFA +++++ K
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R +FEN +WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
++VGNKSDL H R ++E+EGK LAE EGL+F+ETSAM+ +NVE+AF +I +++
Sbjct: 121 MMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVY 174
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 157/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+ GDS VGKSNLLSRF R++F DS+ TIGVEFA R+I+V DK++KAQI
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R ++ EE K AE E +FMETSA++ +NVE+AF +++ QI++ +K+L A
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ TA + G +V+A K+S CC
Sbjct: 187 DDPTTALPKGQMINVGSR-----DDVSAVKKSGCC 216
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 161/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ D+L+K V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V +K++KAQI
Sbjct: 7 DDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++ LNVE+AF ++++QI++ +K+L
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKAL--D 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D AT L G+ I + +V+ K+ CC
Sbjct: 185 IGDDPAT-----LPKGQSINVGSKDDVSEVKKVGCC 215
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 157/220 (71%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ T+EN ++WL+ELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V+ ++ + +E EGL F+ETSA+++ NVE AF +++ +I++ +K
Sbjct: 121 MLVGNKSDLKHLRGVSTDDAQSFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L ++ N G G I+ +D K+ CC
Sbjct: 181 ALASEEN------TTEGPGQGTNIVPLDSNAPDLKKKGCC 214
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 161/216 (74%), Gaps = 9/216 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+++V K+IKAQI
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQI 70
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATF+N +WLRELR+ + ++L+GN
Sbjct: 71 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLIGN 130
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ ++ K AE E +YFMETSA+ NV++AF +++ QI+Q +K++ A
Sbjct: 131 KSDLRHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQIVSKKTVEA- 189
Query: 186 MNDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
+ + A G GK E IN+ +V+A K+ CC
Sbjct: 190 LEEGAA-------GPGKGEKINVKDDVSAMKRVGCC 218
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 157/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA +++ V K+IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATFEN +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+GK AE E LYFMETSA++ NVE+AF ++++QI++ +K++ A
Sbjct: 127 KSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEAG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+++ + IN+ + + K+ CC
Sbjct: 187 EGGSSSSVPSV-----GQTINVKEDFSVLKRFGCC 216
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+IRV +K++KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN +WL+ELR+ S + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +F+ETSA+++ NVE+AF +++ QI+ +K+L +
Sbjct: 127 KADLGHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKAL--E 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ AT + G+ I +V+A K CC
Sbjct: 185 TGDEAAT-----VPKGQTINVGKDDVSAIKIGGCC 214
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 159/219 (72%), Gaps = 4/219 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG D E YLFK V+IGDS VGKSN+LSRF R+ F LDSK TIGVEFA +++++ K
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R +F+N +WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V+E+EGK LAE EGL+F+ETSAM+ +NVE+AF +I +++ +K
Sbjct: 121 MMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L AK + L + I+ID TK++ C
Sbjct: 181 ALAAKEAAAASAP----LPSQGKTISIDSAAGNTKRACC 215
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 149/215 (69%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DEE DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA + +V K++KAQI
Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALL+YD+TR ATFEN +WLRELR + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL H V EE K AE E LYFMETSA+ NVE AF ++++QIH+ ++S+
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSKRSV--- 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ L G E IN+ + + K+ CC
Sbjct: 184 ----DGGGDSTELPGKGETINVKEDGSVLKRMGCC 214
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 157/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA +++ V K+IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATFEN +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+GK AE E LYFMETSA++ NVE+AF ++++QI++ +K++ A
Sbjct: 127 KSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEAG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+++ + IN+ + + K+ CC
Sbjct: 187 EGGSSSSVPSV-----GQTINVKEDSSVLKRFGCC 216
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 157/215 (73%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K+IK+QI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKSQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGALGALLVYD+TR ATFEN +WL+ELR S + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK E E LYF+ETSA++ NVE+AF +++ QI+ +K++
Sbjct: 127 KSDLRHLVAVSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVSKKAV--- 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ A + ++ E I++ ++V+A K+ CC
Sbjct: 184 ---EGAENGTASVPAKGEKIDLKNDVSALKRVGCC 215
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 156/216 (72%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF ++SK TIGVEFA R++ V +K+IKAQ+
Sbjct: 7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDITR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V EE + +E E ++FMETSA+ NVE AF ++ QI++ +K+L
Sbjct: 127 KADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKAL--- 183
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
T + +L G+ I I +VTA K S CC
Sbjct: 184 ----DGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCC 215
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 156/220 (70%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ T+EN ++WL+ELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V ++ + +E EGL F+ETSA+++ NVE AF +++ +I++ +K
Sbjct: 121 MLVGNKSDLKHLRGVPTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L ++ S G G I+ +D K+ CC
Sbjct: 181 ALASE------ESTTEGPGQGTNIVPLDSNSPDLKKKGCC 214
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 159/220 (72%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ T+EN ++WL+ELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V+ ++ + AE EGL F+ETSA+++ NVE AF +++ +I++ +K
Sbjct: 121 MLVGNKSDLRHLRGVSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L ++ N AT G G I+ +D K+ CC
Sbjct: 181 ALASEEN---ATEGP---GQGTNIVPLDSNSPDLKKKGCC 214
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 149/215 (69%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DEE DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA + +V K++KAQI
Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALL+YD+TR ATFEN +WLRELR + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL H V EE K AE E LYFMETSA+ NVE+AF +++ QIH+ ++S+
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSV--- 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L G E IN+ + + K+ CC
Sbjct: 184 ----DGGGESADLPGKGETINVKEDGSVLKRMGCC 214
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 157/220 (71%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MANRIDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TFEN +WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R +++E+G+ LAE EGL F+ETSA++ N+E AF ++++I+ +K
Sbjct: 121 MMAGNKSDLNHLRSISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ + + G INI + AT + CC
Sbjct: 181 ALAAQ-----EAAGSMAVPGQGTAINIS-DTYATNRRGCC 214
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 154/219 (70%), Gaps = 5/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V EE+G+ LAE E L F+ETSA++ NVE AF ++ +I+ +K
Sbjct: 121 LMAGNKSDLNHLRAVAEEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A+ +T L G IN+ TK+S C
Sbjct: 181 ALAAQEAAGNST-----LPGQGTTINVADTSGNTKRSCC 214
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 157/215 (73%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R + E+ A+ + +FMETSA++++NVE+AF +++ QI++ +K+L
Sbjct: 127 KADLRHLRAITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D A + G +V+A K++ CC
Sbjct: 187 -DDPAALPRGQTINVGSR-----DDVSAVKKAGCC 215
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 156/220 (70%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MVPKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ TFEN ++WL+ELR+ + + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V E+ K E EGL F+ETSA++ NVE AF +++ +I+ +K
Sbjct: 121 MLVGNKSDLRHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L ++ A ++ G I + A K+S+CC
Sbjct: 181 ALASEDGPAAAPTS------GTAIKVTEAAPEAKKKSTCC 214
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 156/215 (72%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF R+EF L++K TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL+ELR + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ + AE E YFMETSA+++ NVE++F +++ Q ++ +K L
Sbjct: 127 KADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D T + G + +V+A K++ CC
Sbjct: 187 -DDPTVLPKGQTIDIGSK-----DDVSAVKKAGCC 215
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 4/220 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG D E YLFK V+IGDS VGKSN+LSRF R+ F LDSK TIGVEFA +++++ K
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+ ALLVYDIT+R +F+N +WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R ++E+EGK LAE EGL+F+ETSAM+ +NVE+AF +I +++ +K
Sbjct: 121 MMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L AK TA L + I+ID TK++ C
Sbjct: 181 ALAAKEAAATAAP----LPSQGKTISIDSNAGNTKKACCS 216
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 161/215 (74%), Gaps = 8/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+I V DK++KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ ++ K AE E +FMETSA+++LNV++AF +++ QI++ +K+L +
Sbjct: 127 KADLRHLRAVSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSKKTL--E 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSC 219
+ D A L G+ I + +V+A K+ C
Sbjct: 185 IGDDPAA-----LPKGQTINVGSKDDVSAVKKVGC 214
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 156/219 (71%), Gaps = 7/219 (3%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G +++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R ++V K+I
Sbjct: 3 GYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVI 62
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RAITS+YYRGA+GALLVYD+TRRATFEN +WL+EL+ + ++
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVM 122
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL H V E+GK AE E L FMETSA++ NVEDAF +++ QI++ T +K
Sbjct: 123 LVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQ 182
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ A + + E I + ++V+A K+ CC
Sbjct: 183 VEAGEDGNASVPKG-------EKIEVKNDVSALKKLGCC 214
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 141/174 (81%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG D E YLFK V+IGD+ VGKSN+LSRF R+ F LDSK TIGVEFA +++++ K
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R +F+N +WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
++VGNKSDL H R V+E+EGK LAE EGL+F+ETSAM+ +NVE+AF +I +++
Sbjct: 121 MMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVY 174
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 160/216 (74%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ D+L+K V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V +K++KAQI
Sbjct: 7 DDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ K AE E +FMETSA++ LNVE+AF ++++QI++ +K+L
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKAL--D 184
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ D T L G+ I + +V+ K+ CC
Sbjct: 185 IGDDHTT-----LPKGQSINVGSKDDVSEVKKVGCC 215
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 154/219 (70%), Gaps = 6/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N +WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+E++G+ LAE EGL F+ETSA++ N+E AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A+ T+ L G IN+ TK+ C
Sbjct: 181 ALAAQEAAGTS------LPGQGTTINVADSSANTKRGCC 213
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 154/215 (71%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+++V K+IKAQI
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQI 70
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRR TF+N +WLRELR+ + ++LVGN
Sbjct: 71 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVVMLVGN 130
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ ++ K AE E +YFMETSA+ NV+ +F +++ QI+Q +K++
Sbjct: 131 KSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVEVP 190
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A G E IN+ +V+A K+ CC
Sbjct: 191 EEGAVAP-------GKGEKINVKDDVSAMKRVGCC 218
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 153/215 (71%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNLLSRFARDEF L+++ TIGVEFA + +RV D+L+KAQI
Sbjct: 13 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQI 72
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TRR TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 73 WDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVMLVGN 132
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ + AE G + METSA++ NVE AF +++ QI++ + +L
Sbjct: 133 KADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNAL--D 190
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ D A G ++ D VT S CC
Sbjct: 191 IGDDPA---APPRGRTIDVSAKDDAVTPVNSSGCC 222
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 158/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA +++ + K+IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFE +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE+AF +++ QI++ ++++ A
Sbjct: 127 KSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEA- 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ +TS + G + IN++ + + + CC
Sbjct: 186 -GDRPSTSVVPSQG---QTINVNEDSSVLNRYRCC 216
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 156/219 (71%), Gaps = 7/219 (3%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G +++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R ++V K++
Sbjct: 3 GYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVV 62
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RAITS+YYRGA+GALLVYD+TRRATFEN +WL+EL+ + ++
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVM 122
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL H V E+GK AE E L FMETSA++ NVEDAF +++ QI++ T +K
Sbjct: 123 LVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQ 182
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ A + + E I + ++V+A K+ CC
Sbjct: 183 VEAGEDGNASVPKG-------EKIEVKNDVSALKKLGCC 214
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 158/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA +++ + K+IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFE +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE+AF +++ QI++ ++++ A
Sbjct: 127 KSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEA- 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ +TS + G + IN++ + + + CC
Sbjct: 186 -GDRASTSVVPSQG---QTINVNEDSSVLNRYRCC 216
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 155/219 (70%), Gaps = 5/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL+H R V+E++G+ LAE EGL F+ETSA++ N+E AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A+ + L G IN+ TK+ C
Sbjct: 181 ALAAQ-----EAAVGTTLPGQGTTINVGDASGNTKRGCC 214
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 155/220 (70%), Gaps = 7/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R I+V K
Sbjct: 1 MARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ ATF+N K+WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+H R V ++ + AE EGL FMETSA+++ NVE +F ++ +I+Q +K
Sbjct: 121 MLVGNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SL A+ S IN+ T K+ SCC
Sbjct: 181 SLAAEEAASAGPSQGTP-------INVSDAETIAKKRSCC 213
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 153/219 (69%), Gaps = 5/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GA LVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V EE+G LAE EGL F+ETSA++ N+E AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A + A +N G G IN+ TK+ C
Sbjct: 181 TLAA----QEAAANSTVPGQGT-TINVADASGNTKKGCC 214
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 158/217 (72%), Gaps = 9/217 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+ GDS VGKSNLLSRF R++F DS+ TIGVEFA R+I+ DK++KAQI
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R ++ EE K AE E +FMETSA++ +NV++AF +++ QI++ +K+L A
Sbjct: 127 KADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAG 186
Query: 186 MNDKTATSNCN--NLGGGKEIINIDHEVTATKQSSCC 220
+ TA N+GG +I +A K+ CC
Sbjct: 187 DDPTTALPKGQMINVGGRDDI-------SAVKKPGCC 216
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 158/225 (70%), Gaps = 12/225 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVG--- 57
M D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+ G
Sbjct: 1 MSHKQDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVD 60
Query: 58 DKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSC 117
K IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ TFEN ++WL+ELR+ +
Sbjct: 61 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADAN 120
Query: 118 MAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTT 177
+ I+LVGNKSDL H R+V E + E EGL F+ETSA+ + NVE AF Q++ +I+
Sbjct: 121 IVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIV 180
Query: 178 IQKSLCAKMNDKTATSNCNNLGGGKEIINID--HEVTATKQSSCC 220
+K L ++ N +G G+++I ID H+ A K+ CC
Sbjct: 181 SKKVLDSE-------DNRPKIGEGRDLIVIDKQHDDGAKKKGGCC 218
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 155/219 (70%), Gaps = 7/219 (3%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G +++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R +V K++
Sbjct: 3 GYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGKVV 62
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RAITS+YYRGA+GALLVYD+TRRATFEN +WL+EL+ + ++
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVM 122
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL H V E+GK AE E L FMETSA++ NVEDAF +++ QI++ T +K
Sbjct: 123 LVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQ 182
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ A + + E I + ++V+A K+ CC
Sbjct: 183 VEAGEDGNASVPKG-------EKIEVKNDVSALKKLGCC 214
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 156/219 (71%), Gaps = 5/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL+H R V+E++G+ LAE EGL F+ETSA++ N+E AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A+ + A L G IN+ TK+ C
Sbjct: 181 ALAAQ---EAAVGTI--LPGQGTTINVGDASGNTKRGCC 214
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 156/219 (71%), Gaps = 6/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ T+EN ++WL+ELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V+ ++ + +E EGL F+ETSA+++ NVE AF +++ +I++ +K
Sbjct: 121 MLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L ++ N G G I+ +D K+ C
Sbjct: 181 ALASEEN------TTEGPGQGTNIVPLDSNAPDLKKGCC 213
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 156/215 (72%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+ GDS VGKSNLLSRF R++F DS+ TIGVEFA R+I+ DK++KAQI
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R ++ EE K AE E +FMETSA++ +NV++AF +++ QI++ +K+L A
Sbjct: 127 KADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ TA + G +++A K+ CC
Sbjct: 187 DDPTTALPKGQMINVGSR-----DDISAVKKPGCC 216
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 157/220 (71%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R I+V K
Sbjct: 1 MAPRPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++AT+EN ++WL+ELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V ++ + +E EGL F+ETSA++ NVE AF ++ +I++ +K
Sbjct: 121 MLVGNKSDLKHLRGVATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L ++ D G GK II + TK+ +CC
Sbjct: 181 ALASE--DPVLVGP----GEGKAIIVGPEQDANTKKKACC 214
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 156/219 (71%), Gaps = 5/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+E++G L+E EGL F+ETSA++ N+E AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A + AT+ + G G IN+ TK+ C
Sbjct: 181 ALAA----QEATAGASVPGQGT-TINVADTSGNTKKGCC 214
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 157/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEF +++ + K+IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFE +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+GK AE E LYFMETSA++ NVE+AF +++ QI++ ++++ A
Sbjct: 127 KSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEA- 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ +TS + G + IN++ + + + CC
Sbjct: 186 -GDRASTSVAPSQG---QTINVNEDSSVLNRYRCC 216
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 156/220 (70%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNK+DL H R V+ E+ ++LAE EGL F+ETSA++ LNVE AF ++ I+ +K
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A + ATSN G IN+ + + SCC
Sbjct: 181 ALAA----QEATSNPGLPHG--TTINVANISGNYNKRSCC 214
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 154/220 (70%), Gaps = 7/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R I+V K
Sbjct: 1 MARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ ATF+N K+WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+H R V ++ + AE EGL FMETSA+++ NVE +F ++ +I+Q +K
Sbjct: 121 MLVGNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SL A+ S IN T K+ SCC
Sbjct: 181 SLAAEEAASAGPSQGTP-------INASDAETIAKKRSCC 213
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 154/220 (70%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF LDSK TIGVEFA R ++V K
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L GNKSDL H R V+ E+ + LAE EGL F+ETSA++ NVE AF ++ I+Q +K
Sbjct: 121 MLAGNKSDLNHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ +N L G I I + + + +CC
Sbjct: 181 ALTAQ-----EAANSTGLPQGT-TITIANLSSNINKRACC 214
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 154/220 (70%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R I+V K
Sbjct: 1 MAYKVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TFEN ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L GNKSDL H R V+ ++ + LAE E L F+ETSA++ LNVE AF ++ I+Q +K
Sbjct: 121 MLAGNKSDLNHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ + T + IN+ + ++ SCC
Sbjct: 181 ALAAQESASTTSVPHGT------TINVSNMSGTVEKKSCC 214
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 154/219 (70%), Gaps = 5/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+ GDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHRVDHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL+H R V+E++G+ LAE EGL F+ETSA++ N+E AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A+ + L G IN+ TK+ C
Sbjct: 181 ALAAQ-----EAAVGTTLPGQGTTINVGDASGNTKRGCC 214
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 145/194 (74%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK
Sbjct: 121 MLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK 180
Query: 181 SLCAKMNDKTATSN 194
+ + + + SN
Sbjct: 181 QMSDRRENDMSPSN 194
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 158/219 (72%), Gaps = 4/219 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG D E YLFK V+IGDS VGKSN+LSRF R+ F LDSK TIGVEFA +++++ K
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+ ALLVYDIT+R +F+N +WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R ++E+EGK LAE EGL+F+ET AM+ +NVE+AF +I +++ +K
Sbjct: 121 MMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETLAMEAINVEEAFQTIITEVYGIVNRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L AK TA L + I+ID TK++ C
Sbjct: 181 ALAAKEAAATAAP----LPSQGKTISIDSNAGNTKKACC 215
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 156/219 (71%), Gaps = 5/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK ++IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHRVDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+E++G LAE +GL F+ETSA++ N+E AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A + AT+ + G G IN+ TK+ C
Sbjct: 181 ALAA----QEATAGASVPGQGT-TINVADTSGNTKKGCC 214
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 156/216 (72%), Gaps = 6/216 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYR-NIRVGDKLIKAQ 64
+++ DYLFK V+ GDS VGKSNLLSRF R++F DS+ TIGVEFA R I+V DK++KAQ
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDDKIVKAQ 66
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + I+LVG
Sbjct: 67 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVG 126
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK+DL H R ++ EE K AE E +FMETSA++ +NVE+AF +++ QI++ +K+L A
Sbjct: 127 NKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDA 186
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ TA + G +V+A K+S CC
Sbjct: 187 GDDPTTALPKGQMINVGSR-----DDVSAVKKSGCC 217
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 159/220 (72%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TFEN +WL+ELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL H R V E+ + AE EGL F+ETSA++ LNVE AF ++++I++ +K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
S+ + D+T T+N + G + I++ +T + CC
Sbjct: 181 SISS---DQT-TANASIKEG--QTIDVAATSESTAKKPCC 214
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/226 (53%), Positives = 155/226 (68%), Gaps = 17/226 (7%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TFEN ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+ ++ + LAE E L F+ETSA++ NVE AF ++ I+Q +K
Sbjct: 121 MMAGNKSDLNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKK 180
Query: 181 SLCAKMNDKT------ATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ T T N +N+ G E K+S+CC
Sbjct: 181 ALAAQGAASTTSLPHGTTINVSNMSGSVE-----------KKSACC 215
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 140/177 (79%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATFEN +WL+ELR + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H V+ E+GK AE E LYFMETSA++ NVE+AF +++ QI+ +K++
Sbjct: 127 KSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAV 183
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 154/219 (70%), Gaps = 5/219 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MTHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL+H R V E++G+ LAE EGL F+ETSA++ N+E AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A+ T L G IN+ TK+ C
Sbjct: 181 ALAAQEAGVGTT-----LPGQGTTINVGDASGNTKRGCC 214
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 143/189 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 109
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 110 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 169
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 170 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 229
Query: 186 MNDKTATSN 194
+ T+ SN
Sbjct: 230 RENDTSPSN 238
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 157/220 (71%), Gaps = 8/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MNHKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ TFEN ++WL+ELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V ++ + E EGL F+ETSA+++ NVE AF +++ +I+ +K
Sbjct: 121 MLVGNKSDLRHLRSVQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L ++ DK G I+ + + K+S+CC
Sbjct: 181 ALASE--DKPQPDK------GTRIVVSETQPEEKKKSACC 212
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 151/216 (69%), Gaps = 6/216 (2%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S +EE D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKA
Sbjct: 2 SSEEEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKA 61
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GALLVYDI + A++EN +WL+ELR+ S + I+LV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLV 121
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNKSDL H R V +EE AE L F+ETSA+ + NVE+AF ++ I++ Q+S+
Sbjct: 122 GNKSDLKHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQRSIK 181
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
A +DKT S+ +G D T T + C
Sbjct: 182 AGESDKTTPSDTIVVG------PTDSSTTETSKGGC 211
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 143/185 (77%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TFEN ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+ ++ +ILAE EGL F+ETSA++ LNVE AF ++ I+ +K
Sbjct: 121 MMAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
Query: 181 SLCAK 185
+L A+
Sbjct: 181 ALAAQ 185
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 143/178 (80%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA +++ + K+IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRRATFEN +WL+ELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
KSDL H V E+GK AE E LYFMETSA++ NVE+AF ++++QI++ ++++
Sbjct: 127 KSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRTVA 184
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 158/220 (71%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TFEN +WL+ELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL H R V E+ + AE EGL F+ETSA++ LNVE AF +++++++ +K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
S+ + D+T T+N N G + I++ + + CC
Sbjct: 181 SISS---DQT-TANANIKEG--QTIDVAATSESNAKKPCC 214
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 157/216 (72%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+IRV DK++KAQ+
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQV 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD++R TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGK-ILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
K+DL H R V+ E+ L +FMETSA+++LNVE+AF +++ QI++ +K+L
Sbjct: 127 KADLRHLRAVSTEDSSGFLLNERTHFFMETSALESLNVENAFTEVLTQIYRVVSKKALEI 186
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D TA + G +V+ K+S CC
Sbjct: 187 G-DDPTALPKGQTINVGSR-----DDVSPVKKSGCC 216
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 150/216 (69%), Gaps = 9/216 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSER 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQS-SCC 220
+ SN ++NI + T K CC
Sbjct: 185 QESDMSPSN--------NVVNIQVQPTENKPKMQCC 212
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 156/219 (71%), Gaps = 7/219 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MARRTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ TFEN +WL+ELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V+ E+ + AE EGL F+ETSA++ NVE AF ++ +IH+ +K
Sbjct: 121 MLVGNKSDLKHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L ++ + + GK I+ D + T TK++ C
Sbjct: 181 ALASE------EAAGAGIKEGKTIVVADPD-TNTKKACC 212
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 151/215 (70%), Gaps = 2/215 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+ + DY+FK V+IGDSAVGKS +LSRFARDEF LDSK TIGVEF R + + K +KAQI
Sbjct: 4 NPKIDYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + + I+LVGN
Sbjct: 64 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL + R V E+ K A+ EGL+F+ETSAM+ NVE AFL ++ +I + +KSL A
Sbjct: 124 KCDLDNLRAVPTEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIAS 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ N +L G ++ + T TK+ SCC
Sbjct: 184 QDQ--GNGNHASLSGTSIVVPGQEQDTTTKKKSCC 216
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 152/215 (70%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DEE DYLFK V+IGDS VGK+NLLSRF R+EF L+SK TIGVEFA R+I+V K+IKAQI
Sbjct: 4 DEEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ +T+E+ ++WL+ELR+ S + I+LVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K A GL F+ETSA+ NV+ +F Q++ +I++ K+L +
Sbjct: 124 KSDLRHLRAVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKALESS 183
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N TS G+ I+ TKQ CC
Sbjct: 184 NNTIKPTS-------GQTILVSQTPDEQTKQGGCC 211
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 149/216 (68%), Gaps = 9/216 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSER 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQS-SCC 220
+ SN ++NI T K CC
Sbjct: 185 QESDMSPSN--------NVVNIQVPPTENKPKMQCC 212
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 139/180 (77%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V EE+G LAE EGL F+ETSA++ N+E AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLKHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKK 180
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 143/185 (77%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TFEN ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+ ++ +ILAE EGL F+ETSA++ LNVE AF ++ I+ +K
Sbjct: 121 MMAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
Query: 181 SLCAK 185
+L A+
Sbjct: 181 ALAAQ 185
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 150/215 (69%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATFEN +WL+EL+ S + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+GK AE E LYF+ETSA++ +NVE AF +++ QI+ +K++
Sbjct: 127 KSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N + E INI E + + CC
Sbjct: 187 ENGSASAVPAQG-----EKINIKDE-SGLNRIKCC 215
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 154/216 (71%), Gaps = 6/216 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V +K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K+ AE L F+ETSA+ + NVE AF+Q++ +I++ QK++
Sbjct: 125 KSDLRHLRAVPTDESKVFAERNTLSFIETSALDSTNVEQAFVQILTEIYKIVSQKNIRDG 184
Query: 186 MN-DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N + + +S+ + I H T + CC
Sbjct: 185 GNGEDSPSSDVKPI-----TIPPTHGYTEPNKRKCC 215
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 149/216 (68%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC-A 184
KSDL H R V +E K+ AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D SN E I++ VTA + CC
Sbjct: 185 PEGDVIRPSNV-------EPIDVKPTVTADVRKQCC 213
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 151/213 (70%), Gaps = 4/213 (1%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
+ DY+FK V+IGDSAVGKS LL+RFARDEF +DSK TIGVEF R + + K IKAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RA+TS+YYRGA+GA+LVYD+T+R TFE+ +WL ELR + I+L+GNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMN 187
DL R V E+ K AE EGL+F+ETSA+ NVE++F ++ QI+ T +K+L ++ +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192
Query: 188 DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++N +L G K +I + K S+CC
Sbjct: 193 ----SNNPGSLAGKKILIPASGQEIPAKTSTCC 221
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 143/184 (77%), Gaps = 1/184 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-K 59
M +EE DYLFK V++GDS VGKSNLL RF R+EF LDSK TIGVEFA + I + D K
Sbjct: 1 MTSEKEEEHDYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGK 60
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
++KAQIWDTAGQER++AIT++YYRGA GALLVYDIT+RA+ EN +WLRELRE + M
Sbjct: 61 VVKAQIWDTAGQERYKAITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMV 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
++LVGNK DL H R+V E+GK LAE EGL F+ETSA+ + NVE+AF Q+I +I++ +
Sbjct: 121 VMLVGNKCDLRHLRQVEIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLIREIYRLMKK 180
Query: 180 KSLC 183
K+L
Sbjct: 181 KALV 184
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 149/216 (68%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC-A 184
KSDL H R V +E K+ AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D SN E I++ VTA + CC
Sbjct: 185 PEGDVIRPSNV-------EPIDVKPTVTADVRKQCC 213
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 156/221 (70%), Gaps = 6/221 (2%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ +++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +
Sbjct: 8 GDA-NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGALGA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVII 126
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNKSDL R V E+ K AE EGL+F+ETSA+++ NVE+AF+ ++ +I +K+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFSIMNRKN 186
Query: 182 LCAKMNDKTATSNCNNLGGGKEII--NIDHEVTATKQSSCC 220
L A N N +L GGK+II E+ A K CC
Sbjct: 187 LAAGENQ--GNGNSASLAGGKKIIIPGPAQEIPA-KSKMCC 224
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 150/215 (69%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNLLSRFARDEF L+++ TIGVEFA + ++V DKL+KAQI
Sbjct: 8 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD++RR TF+N ++WLRELR+ + + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ AE G + METSA+ NVE AF +++ QI+ + +L
Sbjct: 128 KADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNAL--D 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ D A G ++ EV+ CC
Sbjct: 186 IGDDPA---APPRGKTIDVSAAKDEVSPVNAGGCC 217
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 152/216 (70%), Gaps = 9/216 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSDR 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQS-SCC 220
++ + SN +++I + T K CC
Sbjct: 185 RDNDMSPSN--------NVVSIQVQPTENKPKMQCC 212
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 153/214 (71%), Gaps = 4/214 (1%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E DYLFK V+IGDS VGKSNLLSRF R++F L+SK TIGVEFA +++ + K+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIW 67
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYD+TRR TFEN +WL+ELR+ M ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVMLIGNK 127
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL H V E+GK AE E LYFMETSA+ NVE AF ++++QI++ ++S+ A
Sbjct: 128 CDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKRSVEAGD 187
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+T+ L + I++ + + K+ CC
Sbjct: 188 IGSASTT----LPSKGQTIDVKDDSSVLKRIGCC 217
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 148/215 (68%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K +E GL F+ETSA+ + NVE AF ++ +I+ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTEIYLIVSQKQINDS 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
ND+ G +I+ KQS CC
Sbjct: 185 NNDEEVKD-----GQPVDIVISSTNPQPNKQSQCC 214
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 142/189 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 109
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 110 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 169
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 170 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 229
Query: 186 MNDKTATSN 194
+ + SN
Sbjct: 230 RENDMSPSN 238
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 153/220 (69%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+ E+ ++LAE EGL F+ETSA++ N+E AF ++ I+ +K
Sbjct: 121 MMAGNKSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ +N L G IN+ + + CC
Sbjct: 181 ALAAQ-----EAANSTGLPQGT-TINVANLSGNVNKRPCC 214
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 152/213 (71%), Gaps = 1/213 (0%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
+ DY+FK V+IGDSAVGKS LL+RFARDEF +DSK TIGVEF R + + K IKAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RA+TS+YYRGA+GA+LVYD+T+R TFE+ +WL ELR + I+L+GNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMN 187
DL R V E+ K AE EGL+F+ETSA+ NVE++F ++ +I+ T +K+L A +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTEIYNTVNKKNL-ASVE 191
Query: 188 DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ ++N +L G K +I + K S+CC
Sbjct: 192 NQGDSNNPGSLAGKKIVIPGSGQDIPAKTSTCC 224
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 159/219 (72%), Gaps = 4/219 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+++ K+IKAQI
Sbjct: 6 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++R++FEN ++WL+ELR+ + I+LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA- 184
KSDL H R V EEG+ A+ GL F+ETSA+ +VE+AF++++ I++ ++ L +
Sbjct: 126 KSDLKHLRAVTTEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKRHLASG 185
Query: 185 -KMNDKTATSNCNNLGGGKEII--NIDHEVTATKQSSCC 220
K+A+ G G+ I N+ H+ ++K+ C
Sbjct: 186 DPTVAKSASGAVYQAGRGETISVGNLSHDNRSSKRKCCS 224
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 154/220 (70%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M +EE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TFEN +WL+ELR+ + + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL H R V E+ + AE EGL F+ETSA++ NVE+AF ++ +I++ +K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SL + ND A N + GK I T + SCC
Sbjct: 181 SLSS--NDPAA----NIIKEGKTITVGGAPEPNTNKPSCC 214
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 152/220 (69%), Gaps = 11/220 (5%)
Query: 4 SYDEEC--DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
SY +E DYLFK V+IGDSAVGKSNLLSR+AR+EF +SK TIGVEF +++ + K +
Sbjct: 2 SYQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEV 61
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRA+TS+YYRGA+GAL+V+DITRR TFEN +WL EL+ S + ++
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVVM 121
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL H REV EE LAE + FMETSA++++NV +AF ++ +IH+ +K+
Sbjct: 122 LVGNKSDLAHIREVTVEEATALAENNAMSFMETSALESVNVAEAFQTVLKEIHKIVSKKA 181
Query: 182 LCAKMN-DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A N T ++ L GG + T + CC
Sbjct: 182 LTADPNKSNTVVASGQRLAGGDD--------TTPRTGGCC 213
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 152/218 (69%), Gaps = 11/218 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNLLSRFARDEF LD++ TIGVEFA + ++V KL+KAQI
Sbjct: 8 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDGKLVKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TR TFEN ++WL ELR+ + + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V EE + AE + METSA+++ NVE AF +++ +I++ +K+L
Sbjct: 128 KADLRHLRAVPPEEARAFAERHRTFSMETSALESTNVEGAFTEVLGEIYRVVSKKAL--D 185
Query: 186 MNDKTATSNCN---NLGGGKEIINIDHEVTATKQSSCC 220
+ D A N+G K+ EV+ CC
Sbjct: 186 IGDDPAAPPRGKTINVGAAKD------EVSPVNTGGCC 217
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 141/180 (78%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R +++ K
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLV+DIT+R TF+N ++WLRELR+ + + +
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++VGNKSDL H R V EE+ + +E EGL F+ETSA++ +NVE AF ++++IHQ +K
Sbjct: 121 MMVGNKSDLNHLRSVPEEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKK 180
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 151/215 (70%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K AE L F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDS 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D+ + SN + I + +A K+ CC
Sbjct: 185 PDDENSPSN-----NVQTITVAPTDNSADKKQKCC 214
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 151/213 (70%), Gaps = 4/213 (1%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
+ DY+FK V+IGDSAVGKS LL+RFARDEF +DSK TIGVEF R + + K IKAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RA+TS+YYRGA+GA+LVYD+T+R TFE+ +WL ELR + I+L+GNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMN 187
DL R V E+ K AE EGL+F+ETSA+ NVE++F ++ QI+ T +K+L ++ +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGD 192
Query: 188 DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++N +L G K +I + K S+CC
Sbjct: 193 ----SNNPGSLAGKKILIPGSGQEIPAKTSTCC 221
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 157/237 (66%), Gaps = 25/237 (10%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV---- 56
M + D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLL 60
Query: 57 -------------GDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENT 103
K +KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TFEN
Sbjct: 61 SLSLNLDNFPPDQFGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENV 120
Query: 104 KKWLRELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVE 163
+WLRELR+ S + I++ GNKSDL H R V +E+G+ LAE EGL F+ETSA++ N+E
Sbjct: 121 LRWLRELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIE 180
Query: 164 DAFLQMINQIHQTTIQKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
AF ++++I+ +K+L A+ NL G INI + +AT + CC
Sbjct: 181 KAFQTILSEIYHIISKKALAAQ-------EAAGNLPGQGTAINIS-DSSATNRKGCC 229
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 153/220 (69%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAYKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+ E+ + LAE EGL F+ETSA++ NVE AF ++ I+ +K
Sbjct: 121 MMAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ ++ L G IN+ + + SCC
Sbjct: 181 ALAAQ-----EANSSTGLPQGT-TINVSNMSSNAGNRSCC 214
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 148/216 (68%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC-A 184
KSDL H R V +E K+ AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D SN E I++ VTA + CC
Sbjct: 185 PEGDVIRPSNV-------EPIDVKPTVTADVRKQCC 213
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 151/213 (70%), Gaps = 4/213 (1%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
+ DY+FK V+IGDSAVGKS LL+RFARDEF +DSK TIGVEF R + + K IKAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RA+TS+YYRGA+GA+LVYD+T+R TFE+ +WL ELR + I+L+GNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMN 187
DL R V E+ K AE EGL+F+ETSA+ NVE++F ++ QI+ T +K+L ++ +
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASECD 192
Query: 188 DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++N +L G K +I + K S+CC
Sbjct: 193 ----SNNPGSLAGKKILIPGSGQEIPAKTSTCC 221
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 155/219 (70%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ ++ DY+FK V+IGDSAVGKS +L+RF+R+EF LDSK TIGVEF R + + K +
Sbjct: 8 GDA-NQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL + R+V E+ K AE EGL+F+ETSA+Q NVE +F+ ++ +I+ T +K+
Sbjct: 127 LVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNTVNKKN 186
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A ++ N +L G K II + K + CC
Sbjct: 187 LAA--DESQGNGNSASLLGQKIIIPGPAQEIPAKSNMCC 223
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 142/185 (76%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+E L+SK TIGVEFA R ++V K
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TFEN ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+ ++ +ILAE EGL F+ETSA++ LNVE AF ++ I+ +K
Sbjct: 121 MMAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
Query: 181 SLCAK 185
+L A+
Sbjct: 181 ALAAQ 185
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 153/220 (69%), Gaps = 5/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MG-SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE AF Q++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ ++ + S N K I + + T++ CC
Sbjct: 180 QIRNDTDNDPSPSGDN----VKPISIAPTDSSDTRKKQCC 215
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 145/194 (74%), Gaps = 1/194 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSN 194
+ + + + SN
Sbjct: 180 QMSDRRENDMSPSN 193
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 142/189 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 MNDKTATSN 194
+ + SN
Sbjct: 185 RENDMSPSN 193
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 142/189 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHMSDR 184
Query: 186 MNDKTATSN 194
+ + SN
Sbjct: 185 RENDMSPSN 193
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 150/217 (69%), Gaps = 9/217 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNLLSRFARDEF L+++ TIGVEFA + ++V DKL+KAQI
Sbjct: 8 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+TRR TF+N ++WLRELR+ + + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ AE G + METSA+ NV+ AF +++ QI+ + +L
Sbjct: 128 KADLRHLRAVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRNALDIG 187
Query: 186 MNDKTATSNCN--NLGGGKEIINIDHEVTATKQSSCC 220
D A ++G K+ EV+ CC
Sbjct: 188 -EDPAAPPRGKTIDVGAAKD------EVSPVNTGGCC 217
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 158/215 (73%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGD+ VGKSNLLSRF R+EF L+SK TIGVEFA R+I+ K+IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDIT++ +F+N ++WL+EL++ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H + V ++ AE+ GL F+ETSA+ N NVE+AF ++++I++ +K+L
Sbjct: 125 KSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKAL--- 181
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K +TSN +IN + T+++ CC
Sbjct: 182 --EKGSTSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 156/220 (70%), Gaps = 7/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TF+N +WL+ELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL H R V E+ + AE EGL F+ETSA++ NVE AF ++++I++ +K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SL + + NN+ GK I+ + E A + +CC
Sbjct: 181 SL-----NSEEPAAANNIKEGKTIVVGESE--ANTKKACC 213
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 142/189 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 MNDKTATSN 194
+ + SN
Sbjct: 185 RENDMSPSN 193
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 153/218 (70%), Gaps = 11/218 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K+IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +IH+ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQS---SCC 220
D++A ++ G +++I T Q CC
Sbjct: 183 --DRSA----HDESPGNNVVDISVPPTTDGQKNKLPCC 214
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 156/220 (70%), Gaps = 7/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TF+N +WL+ELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL H R V E+ + AE EGL F+ETSA++ NVE AF ++++I++ +K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SL + + NN+ GK I+ + E A + +CC
Sbjct: 181 SL-----NSEEPAAANNIKEGKTIVVGESE--ANTKKACC 213
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 148/216 (68%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+S TIGVEFA R+I V K IKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC-A 184
KSDL H R V +E K+ AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D SN E I++ VTA + CC
Sbjct: 185 PEGDVIRPSNV-------EPIDVKPTVTADVRKQCC 213
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 142/189 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 MNDKTATSN 194
+ + SN
Sbjct: 185 RENDMSPSN 193
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 156/214 (72%), Gaps = 2/214 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+ DY+FK V+IGDSAVGKS LL+RFAR+EF LDSK TIGVEF R + + + +KAQIW
Sbjct: 12 QRIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTVKAQIW 71
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR + I+L+GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 131
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V E+ K AE E L+FMETSA++ +NVE+AF+ ++ +I++ +K+L A
Sbjct: 132 SDLGTLRSVATEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYRVVSKKNLVA-- 189
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N+++ +S ++L G +I+ E T +++CC
Sbjct: 190 NEESDSSGNSSLLKGTKIVVPGQEPPPTSKATCC 223
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 158/222 (71%), Gaps = 5/222 (2%)
Query: 2 GDSYDE---ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD 58
G SY E + DY+FK V+IGDSAVGKS LL+RFAR+EF LDSK TIGVEF R + +
Sbjct: 5 GGSYGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDA 64
Query: 59 KLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCM 118
+ +KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR +
Sbjct: 65 RTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNI 124
Query: 119 AIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
I+L+GNKSDL R V E+ K AE E L+FMETSA+++ NVE+AF+ ++ +I++
Sbjct: 125 VIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVS 184
Query: 179 QKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K+L A N++ +S ++L G +I+ E ++SCC
Sbjct: 185 KKNLVA--NEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCC 224
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 155/217 (71%), Gaps = 3/217 (1%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
+++++ DY+FK V+IGDSAVGKS LL+RFAR+EF LDSK TIGVEF + I V K +KA
Sbjct: 7 NFNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVDHKTVKA 66
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ KWL ELRE + + I+LV
Sbjct: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLV 126
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNKSDL R V E+ K A+ E L+FMETSA++ NVE AF+ ++ +I++ +KSL
Sbjct: 127 GNKSDLESLRAVPIEDAKEFAQKENLFFMETSALEATNVESAFISVLTEIYRVVSKKSLV 186
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A ND+ +N + L G K +I SSCC
Sbjct: 187 A--NDEYGGNN-SLLKGNKIVIPGQEPEMQATNSSCC 220
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 158/220 (71%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DEE DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TFEN +WL+ELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL H R V E+ + AE EGL F+ETSA++ NV+ AF ++++I++ +K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L ++ + + + GK I+ + +TK+++CC
Sbjct: 181 TLSSEESAAPVS-----VKDGKTIV-VGGPDPSTKKTTCC 214
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 155/217 (71%), Gaps = 10/217 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+EL++ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ Q+ + +
Sbjct: 125 KSDLRHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQMSGR 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVT--ATKQSSCC 220
+D + S+ +++ I + T + KQS+CC
Sbjct: 185 GDDSFSPSS--------KVVPITVQPTQNSGKQSACC 213
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 149/216 (68%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ QK+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEV-TATKQSSCC 220
S N +GG + + I + T KQ CC
Sbjct: 180 ---DQGESAQNPIGGERRTLEITNSADTEAKQGKCC 212
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 155/220 (70%), Gaps = 4/220 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD YD+ DY+FK V+IGDSAVGKS +LSRFA++EF LDSK TIGVEF R I + +K I
Sbjct: 6 GD-YDQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTI 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
K QIWDTAGQER+RA+TS+YYRGALGA+LVYDIT+R +F++ +WL ELR + + I+
Sbjct: 65 KTQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK DL R V EE+ K A+ EGL+F ETSA++ +NVE AF+ + +I++ +K+
Sbjct: 125 LIGNKCDLRDMRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIVSRKA 184
Query: 182 LCAKMNDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
L A N++ N L G K + + + V K+ SCC
Sbjct: 185 LTA--NEEERNGNAAALTGTKIALSSPEQPVMTVKKRSCC 222
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 154/219 (70%), Gaps = 4/219 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R +V K
Sbjct: 1 MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N +WLRELR+ S + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V EE+G+ LAE EGL F+ETSA++ NVE AF ++ +I+ +K
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L A+ ++ + G IN+D K++ C
Sbjct: 181 ALAAQEAAAANSA----IPGQGTTINVDDTSGGAKRACC 215
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 155/219 (70%), Gaps = 7/219 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TFEN +WL+ELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL H R V E+ + AE EGL F+ETSA++ NVE AF ++ +I++ +K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
+L + D A + GK ++ +D T TK++ C
Sbjct: 181 TLSS---DDPAPAGIKE---GKTLV-VDGSDTNTKKTCC 212
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 156/220 (70%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVY +T+R TFEN ++WLRELR+ + + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+ E+ + LAE E L F+ETSA++ LNVE AF ++ I+Q +K
Sbjct: 121 MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ ++ +L G IN+ + + ++ +CC
Sbjct: 181 ALAAQ-----EAASTTSLPHGT-TINVSNLSSNVEKKTCC 214
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 149/215 (69%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNLLSRFARDEF L+++ TIGVEFA + ++V DKL+KAQI
Sbjct: 8 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD++RR TF+N ++WLRE R+ + + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V+ E+ AE G + METSA+ NVE AF +++ QI+ + +L
Sbjct: 128 KADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNAL--D 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ D A G ++ EV+ CC
Sbjct: 186 IGDDPA---APPRGKTIDVSAAKDEVSPVNAGGCC 217
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 149/215 (69%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQ R+RAITS+YYRGA+GALLVYD+TR ATFEN +WL+EL+ S + ++LVGN
Sbjct: 67 WDTAGQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V E+GK AE E LYF+ETSA++ +NVE AF +++ QI+ +K++
Sbjct: 127 KSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGG 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N + E INI E + + CC
Sbjct: 187 ENGSASAVPAQG-----EKINIKDE-SGLNRIKCC 215
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 141/189 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTTKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTEIYRIVSQKQMSDR 184
Query: 186 MNDKTATSN 194
+ + SN
Sbjct: 185 RENDMSPSN 193
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 155/220 (70%), Gaps = 5/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEF+ + ++V K
Sbjct: 1 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYD+T+R TFEN ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
V++GNKSDL+H R V+E++G+ +AE EGL F+ETSA+ N++ AF ++ +I+ +K
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ + T G IN+ + + CC
Sbjct: 181 ALAAQEAAASITHP-----GQGTTINVSDTSGDSNRRGCC 215
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 144/201 (71%), Gaps = 5/201 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V +K IKAQI
Sbjct: 4 DDEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE + AE L F+ETSA++ NV+DAF ++ +I+ QK + A
Sbjct: 124 KSDLKHLRAVPTEEAQKFAEENDLSFIETSALEAENVDDAFTTILTKIYHIVSQKQVAAP 183
Query: 186 -----MNDKTATSNCNNLGGG 201
+ D T N GG
Sbjct: 184 EKPDTVIDPTKPQNSKEKSGG 204
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 150/215 (69%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+EL++ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K LAE GL F+ETSA+ + NVE AF ++ I+ Q+ + +
Sbjct: 125 KSDLRHLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMTGR 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+D + N N + I + A K S+CC
Sbjct: 185 -SDTDFSPNSNVVP-----ITVQPTQNAAKSSACC 213
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 155/220 (70%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M +EE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRPEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TFEN +WL+ELR+ + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL H R V E+ + AE EGL F+ETSA++ LNVE AF ++++I++ +K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
S+ + A++N N G + I++ + + CC
Sbjct: 181 SISSDQ----ASANANVKEG--QTIDVAASSESNTKKPCC 214
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 151/215 (70%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ S N LGG ++++ I A ++ CC
Sbjct: 180 --DQGEGSQ-NVLGGERKVLEISKSADAEQKKGCC 211
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 151/216 (69%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVESKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+EL++ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ I+ Q+ + +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 186 MN-DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ D + +SN I + A+KQ +CC
Sbjct: 185 SDADFSPSSNV-------VPITVQPTQNASKQGACC 213
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 155/220 (70%), Gaps = 8/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TFEN +WL+ELR+ + + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL H R V E+ + AE EGL F+ETSA++ NVE AF ++++I++ +K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SL + ++ A +N GK I+ E A + CC
Sbjct: 181 SLTS---EEPAPANIKE---GKMIVVGGSE--ANTKKPCC 212
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 151/220 (68%), Gaps = 11/220 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K
Sbjct: 1 MG-SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E KI AE L F+ETSA+ + NVE AF ++ +I+++
Sbjct: 120 MLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKS---- 175
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+++K S+ GGG I I T + CC
Sbjct: 176 -----VSNKHVGSDRQGYGGGSGTI-IPAPPTEPPKKQCC 209
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 141/189 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ NVE AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 MNDKTATSN 194
+ + SN
Sbjct: 185 RENDMSPSN 193
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I+ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQI 181
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 154/219 (70%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ ++ DY+FK V+IGDSAVGKS +L+RF+R+EF LDSK TIGVEF R + + K +
Sbjct: 8 GDA-NQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL + R+V E+ K AE EGL+F+ETSA+Q NVE +F+ ++ +I+ +K+
Sbjct: 127 LVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNILNKKN 186
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A ++ N +L G K +I + K S CC
Sbjct: 187 LAA--DESQGNGNSASLLGQKIVIPGPGQEVPAKSSMCC 223
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 152/220 (69%), Gaps = 11/220 (5%)
Query: 4 SYDEEC--DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
SY +E DYLFK V+IGDSAVGKSNLLSR+AR+EF +SK TIGVEF +++ + K +
Sbjct: 2 SYQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEL 61
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRA+TS+YYRGA+GAL+VYDITRR TFEN +W EL+ + + ++
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVVM 121
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL H REV EE LAE +YFMETSA++ +NV +AF ++ +IH+ +K+
Sbjct: 122 LVGNKSDLAHIREVTAEEATALAEKNTMYFMETSALEAVNVVEAFQTVLKEIHKIVSKKA 181
Query: 182 LCAKMND-KTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A N T ++ L G + T + ++CC
Sbjct: 182 LTADPNKGNTVVASGQRLAGSDD--------TTPRTTACC 213
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 154/220 (70%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L GNK+DL H R V+ E+ ++LAE E L +ETSA++ NVE AF ++ I+Q +K
Sbjct: 121 MLAGNKTDLNHLRSVSAEDAQMLAEKECLSCLETSALEASNVEKAFQTILLDIYQIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A+ +N L G INI + T + +CC
Sbjct: 181 ALAAQ-----EAANSTGLPQGT-TINIGNLSTNINKKACC 214
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 156/217 (71%), Gaps = 2/217 (0%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
+Y+++ DY+FK V+IGDSAVGKS LL+RFAR+EF LDSK TIGVEF + + + K +KA
Sbjct: 8 TYNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKA 67
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ KWL ELR+ + + I+L+
Sbjct: 68 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLI 127
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNKSDL R V E+ K A+ E L+FMETSA++ NVE AFL ++ +I++ +K+L
Sbjct: 128 GNKSDLGTLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALI 187
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A N++ + + + L G ++ V+ + SCC
Sbjct: 188 A--NEQESGGSSSLLKGTNIVVPEQEPVSGGRSFSCC 222
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 152/221 (68%), Gaps = 7/221 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN +WLRELR+ S + I
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNK DL H R V +E K AE L F+ETSA+ + NVE AF ++ +I++ Q+
Sbjct: 120 MLVGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQR 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEV-TATKQSSCC 220
L D+ T NN+ E IN+ V T + CC
Sbjct: 180 QLREPAEDE-VTIRPNNV----ETINVKPTVSTENVRRQCC 215
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 147/213 (69%), Gaps = 11/213 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + AT+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V +E K + GL F+ETSA+ NVE AF ++ I++ KSL
Sbjct: 128 KHLRAVTTDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL------- 180
Query: 190 TATSNCNNLGGGKEIINIDHEV--TATKQSSCC 220
S+ NN+ KE I++ + TAT+ S CC
Sbjct: 181 --ESSTNNIEPPKEGISVGPSLDSTATQGSKCC 211
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 149/214 (69%), Gaps = 7/214 (3%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E DYLFK V+IGDS VGKSNLLSRF ++ F LDSK TIGVEFA R +V K IKAQIW
Sbjct: 14 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQIW 73
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYD+T+ ATFEN K+WL+ELR+ S + I+L+GNK
Sbjct: 74 DTAGQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNK 133
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
+DL H R V ++ AE EGL F+ETSA+ NV+ AF ++ +IH+ +K+L
Sbjct: 134 TDLRHLRSVATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEIHRVISKKALT--- 190
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
T S +G G+ I+ E T+ S CC
Sbjct: 191 ---TEDSGAGVVGEGQSILVSGGEPTSV-SSRCC 220
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 1 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 60
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 61 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 120
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E ++ AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 121 KSDLRHLRSVPTDEARLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 177
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 153/220 (69%), Gaps = 5/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAFKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNKSDL H R V+ E+ + LAE EGL F+ETSA++ NV+ AF ++ I+ +K
Sbjct: 121 MMAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L A + ATS+ L G I + A SCC
Sbjct: 181 ALAA----QEATSST-GLPQGTTINVSNMAGNAGGNRSCC 215
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 148/220 (67%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K
Sbjct: 1 MGNR-DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ N N+ + + T + + CC
Sbjct: 180 QIRDPPEGSVIRPNLENID-----VKPTNPTTDSVRKQCC 214
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N N+ + + T + + CC
Sbjct: 185 PEGSVIRPNLENID-----VKPTNPTTDSVRKQCC 214
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 28 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 87
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 88 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 147
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 148 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 204
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 140/180 (77%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M +++ DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHRVEQDYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N +WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNK+DL H R V EE+G+ LAETEGL F+ETSA++ NVE AF ++ +I+ +K
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N N+ + + T + + CC
Sbjct: 185 PEGSVIRPNLENID-----VKPTNPATDSVRKQCC 214
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 153/219 (69%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ + + DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +
Sbjct: 8 GDA-NAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK DL + R+V E+ K AE EGL+F+ETSA++ NVE AF ++ +I+ +KS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A ++ N +L G K II + K++ CC
Sbjct: 187 LAA--DESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCC 223
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 151/220 (68%), Gaps = 11/220 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K
Sbjct: 1 MG-SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E KI AE L F+ETSA+ + NVE AF ++ +I+++
Sbjct: 120 MLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKS---- 175
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+++K ++ GGG I I T + CC
Sbjct: 176 -----VSNKHVGTDRQGYGGGSGTI-IPAPPTEPPKKQCC 209
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 155/222 (69%), Gaps = 6/222 (2%)
Query: 2 GDSY---DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD 58
G SY +++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + +
Sbjct: 4 GRSYGDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
Query: 59 KLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCM 118
K IKAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR +
Sbjct: 64 KSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNI 123
Query: 119 AIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
I+L+GNKSDL + R+V E+ K AE EGL+F+ETSA++ NVE AF+ ++ +I
Sbjct: 124 VIILIGNKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIIN 183
Query: 179 QKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K+L A +D N +L GK+II K+S CC
Sbjct: 184 KKNLAA--SDNQGNDNSASL-SGKKIIVPGPAQEIPKRSMCC 222
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 154/222 (69%), Gaps = 6/222 (2%)
Query: 2 GDSY---DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD 58
G SY +++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + +
Sbjct: 4 GGSYGDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQH 63
Query: 59 KLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCM 118
K +KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR +
Sbjct: 64 KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNI 123
Query: 119 AIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
I+L+GNKSDL + R+V E+ K AE EGL+F+ETSA++ NVE AF+ ++ +I
Sbjct: 124 VIILIGNKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIVN 183
Query: 179 QKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K+L A D N +L GK+II K+S CC
Sbjct: 184 KKNLAA--GDNQGNGNAASL-SGKQIIVPGTAQEIPKRSMCC 222
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 155/219 (70%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK----Q 180
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
++D++A ++ G +++I T Q S CC
Sbjct: 181 ISDRSA----HDESPGNNVVDISVPPTTDGQKSNKLQCC 215
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 149/220 (67%), Gaps = 15/220 (6%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN +WLRELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL H R V +E K AE L F+ETSA+ + NVE AF ++ +I++ QKSL
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKSL--- 181
Query: 186 MNDKTATSNCNNLGGGKE---IINIDHEVT--ATKQSSCC 220
+ N G G + I+I VT + + CC
Sbjct: 182 -------PDSGNSGAGPDDGSTIDIGSTVTENSGNKKPCC 214
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 142/189 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 MNDKTATSN 194
+ + SN
Sbjct: 185 RENDMSPSN 193
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 153/219 (69%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D++A ++ G +++I T Q S CC
Sbjct: 183 --DRSA----HDESPGNNVVDISVPPTTDGQKSSKLQCC 215
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 155/218 (71%), Gaps = 4/218 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ YD + DY+FK V+IGDSAVGKS LLSRF+R+EF L+SK TIGVEF R I V K IK
Sbjct: 6 NEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RA+TS+YYRGA+GA++VYDIT+ +F++ +WL ELR + + I+L
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADANIVIML 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL++ R+V + + AE +GL F+ETSAM++ NVE AF ++++I++T +K+L
Sbjct: 126 IGNKSDLSNLRQVETDTAREYAEKQGLSFLETSAMESTNVETAFFTVLSEIYKTVSKKAL 185
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A N A L G K + +V TK++ CC
Sbjct: 186 IADENQGGAPL----LPGTKITLTDKDDVIGTKKAGCC 219
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 153/220 (69%), Gaps = 5/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MG-SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE AF Q++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ ++ + S N K I + + T++ CC
Sbjct: 180 QIRNDADNDPSPSGDN----VKAISIAPTDSSDTRKRQCC 215
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 153/219 (69%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D++A ++ G +++I T Q S CC
Sbjct: 183 --DRSA----HDESPGNNVVDISVPPTTDGQKSNKLQCC 215
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 39 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 98
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 99 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 158
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 159 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 215
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 155/218 (71%), Gaps = 1/218 (0%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S DE DYL+K V+IGDS VGKSNLLSRF RDEF L+SK TIGVEFA ++I K+IKA
Sbjct: 3 SKDEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIKA 62
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GALLVYDI++R++FEN ++WL+ELR+ + ++LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLV 122
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNKSDL + R V +EE +E EG+ ME SA+ + NV++AF +++++I+ ++ L
Sbjct: 123 GNKSDLRNLRTVTQEEACAFSEREGMACMEASALNSSNVDEAFHRILSEIYTLRSERQLT 182
Query: 184 AKMND-KTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A +D AT G + I ID +K+ SCC
Sbjct: 183 ANQHDLNKATLPLGTQGVRVDPIRIDLNSKGSKKRSCC 220
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 151/214 (70%), Gaps = 4/214 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V + +KAQI
Sbjct: 9 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 68
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGALGALLVYD+T+ TF+N +WL+ELR+ + + I+L+GN
Sbjct: 69 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGN 128
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ + AE EGL F+ETSA++ NVE AF + +I++ +KSL +
Sbjct: 129 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSL-ST 187
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSC 219
N+ A +N GK I E T T + C
Sbjct: 188 ANEPAAAANIKE---GKTIAIGGSETTNTNKPCC 218
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 157/214 (73%), Gaps = 2/214 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+ DY+FK V+IGDSAVGKS LL+RFAR++F LDSK TIGVEF R + + + +KAQIW
Sbjct: 12 QRIDYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIW 71
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR + I+L+GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNK 131
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V E+ K AE E L+FMETSA++ +NVE+AF+ ++ +I++T +K+L A
Sbjct: 132 SDLGTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVA-- 189
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N++ +S ++L G +I+ E +T +++CC
Sbjct: 190 NEEPDSSGNSSLLKGTKIVVPGQEPPSTLKATCC 223
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 154/219 (70%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ ++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +
Sbjct: 6 GDA-SQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK+DL R V E+ K A+ EGL+F+ETSAM+ N+EDAFL ++ +I +K+
Sbjct: 125 LIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKN 184
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A +D + N +L G K ++ +V K++ C
Sbjct: 185 LAA--DDNQSNGNPASLTGKKILVPGPGQVIPEKKACCS 221
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 152/214 (71%), Gaps = 2/214 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+ DY+FK V+IGDSAVGKS LL+RFAR+EF LDSK TIGVEF R ++V + IKAQIW
Sbjct: 13 KRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIW 72
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR + I+L+GNK
Sbjct: 73 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNK 132
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V E+ K A E L+FMETSA++ NVE+AF + +I++ +K+L A
Sbjct: 133 SDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVA-- 190
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N++T +S ++L G +II E +++CC
Sbjct: 191 NEETDSSGNSSLLKGTKIIVPGQEPAPPAKAACC 224
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 140/180 (77%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M +++ DYLFK V+IGDS VGK+N+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N +WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNK+DL H R V EE+G+ LAETEGL F+ETSA++ NVE AF ++ +I+ +K
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 154/224 (68%), Gaps = 13/224 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG + D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MG-TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
+ D+ A ++ G +++I T Q CC
Sbjct: 180 QIA----DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 12 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 71
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 131
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 132 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 189
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 190 --DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 222
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQKPTKLQCC 215
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 153/215 (71%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+ DYLFK V+IGDSAVGKSNLLSR+AR+EF L+SK TIGVEF +++ +G K IKAQI
Sbjct: 6 DKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGGKEIKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS+YYRGA+GAL+VYDI+RR TFEN +WL ELR + + ++LVGN
Sbjct: 66 WDTAGQERFRAVTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASVVVMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL + REV++EE +LA+ E + F+ETSAM NV +AF ++ +I++ +K L +
Sbjct: 126 KCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKPLASS 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ K+ T LG + + ID + +CC
Sbjct: 186 TSMKSNTV----LGSSQRLAGIDD---TQPKKNCC 213
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 153/220 (69%), Gaps = 5/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MG-SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE AF Q++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ ++ + S N K I + + T++ CC
Sbjct: 180 QIRNDADNDPSPSGDN----VKAISIAPTDSSDTRKRQCC 215
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 151/220 (68%), Gaps = 11/220 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K
Sbjct: 1 MG-SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E KI AE L F+ETSA+ + NVE AF ++ +I+++
Sbjct: 120 MLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKS---- 175
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+++K ++ GGG I I + + CC
Sbjct: 176 -----VSNKHVGTDRQGYGGGSGTI-IPSPASDPPKKQCC 209
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 151/218 (69%), Gaps = 8/218 (3%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S D+E DYLFK V+IGDS VGKSNLLSRF R++F L+SK TIGVEFA R+I+ K IKA
Sbjct: 2 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKA 61
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN ++WL ELR+ S + I+LV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLV 121
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI-HQTTIQKSL 182
GNKSDL H R V E+ LAE GL F+ETSA+ + NVE AF +++ +I H K L
Sbjct: 122 GNKSDLRHLRAVPTEQAAALAEKHGLSFIETSALDSTNVELAFQKILTEIFHIVNGGKQL 181
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K + ++ + G E++ + + K +CC
Sbjct: 182 ETKKDSQS-------VDGETEVVQVGGDPAPKKAGACC 212
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 155/215 (72%), Gaps = 3/215 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 16 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQI 75
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGALGA+LVYD+++ TFEN +WL+ELR+ + + I+LVGN
Sbjct: 76 WDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGN 135
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V ++G+ AE EGL ++ETSA++ NVE+AF ++ I++ +K++
Sbjct: 136 KTDLKHLRAVATDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKAVA-- 193
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++D A + GK IN+ T+ ++ CC
Sbjct: 194 LDDGGAGGAGGGVKEGK-TINVAASDTSGEKKQCC 227
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/182 (60%), Positives = 139/182 (76%), Gaps = 1/182 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQK 179
Query: 181 SL 182
+
Sbjct: 180 QI 181
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 147/199 (73%), Gaps = 6/199 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DEE DYLFK V+IGDS VGKSNLLSRF R+EF ++SK TIGVEFA ++I+ +K+IKAQI
Sbjct: 59 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIKAQI 118
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDIT+ +TFEN ++WL+ELR+ S + ++LVGN
Sbjct: 119 WDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVMLVGN 178
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL H R V+ EE K AE L F+ETSA+ + V+ AF Q++ +I++ +K +
Sbjct: 179 KCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQMSGN 238
Query: 186 MNDKTATSNCNNLGGGKEI 204
N N N+G G+ I
Sbjct: 239 GN------NSLNIGQGERI 251
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQRPNKLQCC 215
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 149/217 (68%), Gaps = 10/217 (4%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KA
Sbjct: 2 SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKA 61
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I+LV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLV 121
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNKSDL H R V +E KI AE L F+ETSA+ + NVE AF ++ +I+++
Sbjct: 122 GNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKS------- 174
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+++K ++ GGG I I + + CC
Sbjct: 175 --VSNKHVGTDRQGYGGGSGTI-IPSPASDPPKKQCC 208
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 154/222 (69%), Gaps = 5/222 (2%)
Query: 2 GDSYDE---ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD 58
G Y E DY+FK V+IGDSAVGKS LL+RFAR+EF LDSK TIGVEF R ++V
Sbjct: 4 GGGYGEVGQRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQ 63
Query: 59 KLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCM 118
+ IKAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR +
Sbjct: 64 RTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNL 123
Query: 119 AIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
I+L+GNKSDL R V E+ K A E L+FMETSA++ NVE+AF + +I++
Sbjct: 124 VIMLIGNKSDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVS 183
Query: 179 QKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K+L A N++T +S ++L G +II E +++CC
Sbjct: 184 KKNLVA--NEETDSSGNSSLLKGTKIIVPGQEPAPPAKAACC 223
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 144/194 (74%), Gaps = 1/194 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL-CA 184
KSDL H R V +E K AE L F+ETSA+ + NVE AF ++ +I+ QK + +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNILTEIYHIVSQKQIRDS 184
Query: 185 KMNDKTATSNCNNL 198
+D++ ++N +
Sbjct: 185 PGDDESPSTNVQTI 198
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 36 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 95
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 96 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 155
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 156 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 213
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 214 --DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 246
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 152/216 (70%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+EL++ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ I+ Q+ + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 186 MN-DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ D + SN I+++ T++ + SCC
Sbjct: 185 TDSDFSPASNV-------VPISVEPTQTSSSKGSCC 213
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+ VGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMQVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC-A 184
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ +I+ QK + +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQIHDS 184
Query: 185 KMNDKTATSN 194
+D + SN
Sbjct: 185 PTSDGSHPSN 194
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 150/220 (68%), Gaps = 5/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R +++ K
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
++ GNK DL H R V+EE+G+ LAE E L F+ETSA++ N+E AF ++ +I+
Sbjct: 121 MMAGNKCDLKHLRAVSEEDGQGLAEREELSFLETSALEATNIEKAFQTILTEIYHI---- 176
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ K + L G IN++ + +CC
Sbjct: 177 -ISKKALAAQEAAASTALPGQGTTINVNDASGNQNKKTCC 215
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 153/219 (69%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ ++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +
Sbjct: 6 GDA-SQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK+DL R V E+ K A+ EGL+F+ETSAM+ NVEDAFL ++ +I +K+
Sbjct: 125 LIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFNIVNKKN 184
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A N + N +L G K ++ +V K++ C
Sbjct: 185 LAADENQ--SNGNPASLTGKKILVPGPGQVIPGKKACCS 221
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 141/189 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ Q + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQMSDR 184
Query: 186 MNDKTATSN 194
+ + SN
Sbjct: 185 RENDMSPSN 193
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 156/215 (72%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGD+ VGKSNLLSRF R+EF L+SK TIG EFA R+I+ K+IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDIT++ +F+N ++WL+EL++ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H + V ++ AE+ GL F+ETSA+ N VE+AF ++++I++ +K+L
Sbjct: 125 KSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYRLGSKKAL--- 181
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K +TSN +IN + T+++ CC
Sbjct: 182 --EKGSTSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/213 (52%), Positives = 155/213 (72%), Gaps = 5/213 (2%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
DYLFK V+IGD+ VGKSNLLSRF R+EF L+SK TIGVEFA R+I+ K+IKAQIWD
Sbjct: 8 PVDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWD 67
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RAITS+YYRGA+GALLVYDIT++ +F+N ++WL+EL++ + + I+LVGNKS
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKS 127
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMN 187
DL H + V ++ AE+ GL F+ETSA+ N NVE+AF ++++I++ +K+L
Sbjct: 128 DLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKAL----- 182
Query: 188 DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K +TSN +IN + T+++ CC
Sbjct: 183 EKGSTSNFAPNATQTIVINPPADEGKTEKAKCC 215
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 150/221 (67%), Gaps = 16/221 (7%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL--C 183
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + C
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADC 184
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
A ++ G +++I T Q CC
Sbjct: 185 AAHDESP----------GNNVVDISVPPTTDGQKPNKLQCC 215
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 150/221 (67%), Gaps = 16/221 (7%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL--C 183
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + C
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADC 184
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
A ++ G +++I T Q CC
Sbjct: 185 AAHDESP----------GNNVVDISVPPTTDGQKPNKLQCC 215
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 150/215 (69%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IK+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I + K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ S+ N L G ++++ I + K+ CC
Sbjct: 180 ---ESGDSSANQL-GDRKVVEITKTPDSEKKPGCC 210
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 154/218 (70%), Gaps = 13/218 (5%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E DYLFK V+IGDS VGKSNLLSRF ++ F LDSK TIGVEFA R ++V +K+IKAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIW 72
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYD+T+ TFEN K+WL+ELR+ S + ++L+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
+DL H R V E+ AE+EGL+F+ETSA+ NVE AF ++ +I++ +K L ++
Sbjct: 133 TDLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFHTVLAEIYRIISKKPLSSEE 192
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQ----SSCC 220
+ NL G+ I +V+AT S CC
Sbjct: 193 SGL----GSGNLREGQSI-----QVSATNSGALTSRCC 221
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 152/219 (69%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRG +GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D++A ++ G +++I T Q S CC
Sbjct: 183 --DRSA----HDESPGNNVVDISVPPTTDGQKSSKLQCC 215
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 147/215 (68%), Gaps = 3/215 (1%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGKS +L+R+ARDEF LDSK TIGVEF R + + K +KAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 71
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGA+GA+LVYDITRR TF++ +WL ELR + I+L+GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNK 131
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R + E+ K AE EGL+F+ETSA NVE AF ++ +I +KSL A
Sbjct: 132 SDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASE 191
Query: 187 NDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
+ + N +L G K +I+ +V K + CC
Sbjct: 192 DQENG--NPGSLAGKKIDIVPGPGQVIPNKSNMCC 224
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 149/215 (69%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA ++++ K IKAQI
Sbjct: 5 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI+++ +F +KWL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V+ EEGK AE L F+ETSA+ NVE AF Q++ +I++ +K+L +
Sbjct: 125 KSDLKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALTNE 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N + G ++ E T + CC
Sbjct: 185 KN-----PSFKPALGESVVVRDPAEDKGTHKKKCC 214
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DY+FK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ET+A+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 159/216 (73%), Gaps = 14/216 (6%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV-GDKLIKAQIWDT 68
DYLFK V+IGDS VGKSNLLSRF RDEF L+SK TIGVEFA ++I++ +K+IKAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 69 AGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSD 128
AGQER+RAITS+YYRGA+GALLVYDIT++ +FEN +KWL+ELR+ S + I+LVGNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 129 LTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMND 188
L H R +N+ + A+ E L F+ETSA++ NVE AF Q++N+I+ QK
Sbjct: 129 LKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVR-QK-------- 179
Query: 189 KTATSNCNNLG---GGKEI-INIDHEVTATKQSSCC 220
K AT N +NL GK+I ++ D++ TK+ + C
Sbjct: 180 KQATKNDDNLSIQPRGKKINVDDDNDKNETKKKNKC 215
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 150/215 (69%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IK+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I + K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ S+ N L G ++++ I + K+ CC
Sbjct: 180 ---ESGDSSANQL-GDRKVVEITKTPDSEKKQGCC 210
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 148/214 (69%), Gaps = 3/214 (1%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +KAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+LVGNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHADKNIVIILVGNK 131
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL R V E+ K A+ EGL+F+ETSA+++ NVE AFL ++ +I +K+L
Sbjct: 132 CDLESQRVVPTEDAKEFAQKEGLFFLETSALESTNVETAFLTVLTEIFNIVNKKTLAGA- 190
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D N +LGG K ++ +V K S CC
Sbjct: 191 -DNQTNGNPASLGGKKIVVPGPAQVIPEK-SKCC 222
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
A + ++ G +++I T Q S CC
Sbjct: 182 -----AERSAHDESPGNNVVDISVPPTTDGQKSNKLQCC 215
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 65 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 124
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 125 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 184
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 185 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 242
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 243 --DRAA----HDESPGNNVVDISVPPTTDGQKPSKLQCC 275
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 152/219 (69%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE++F ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQK----Q 180
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
M D+ A + G +++I T Q S CC
Sbjct: 181 MADRAAHEDS----PGNNVVDISVTPTMDGQRSIKLQCC 215
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 152/219 (69%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ ++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +
Sbjct: 4 GDA-NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 62
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 63 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 122
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L GNK DL + R+V E+ K AE EGL+F+ETSA++ NVE AF+ ++ +I+ +K+
Sbjct: 123 LTGNKCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKN 182
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A N N +L G K I+ + K++ CC
Sbjct: 183 LTADENQ--GNGNSASLSGQKIIVPGPAQEIPAKRNMCC 219
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 152/216 (70%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ QK+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALD-- 180
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
N ++A + N+G G I ++ + A K CC
Sbjct: 181 -NGESAQA---NIGAGTNISLSKPADDGAAKGGKCC 212
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 152/219 (69%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE++F ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQK----Q 180
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
M D+ A + G +++I T Q S CC
Sbjct: 181 MADRAAHEDS----PGNNVVDISVTPTMDGQRSVKLQCC 215
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 156/224 (69%), Gaps = 13/224 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQS----SCC 220
+ D++A ++ G +++I T+ Q CC
Sbjct: 180 QIA----DRSA----HDESPGNNVVDISVPPTSDGQKGNKIQCC 215
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 153/219 (69%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 53 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 112
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 113 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 172
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 173 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 230
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D++A ++ G +++I T Q S CC
Sbjct: 231 --DRSA----HDESPGNNVVDISVPPTTDGQKSNKLQCC 263
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 150/220 (68%), Gaps = 2/220 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M ++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA ++I K
Sbjct: 1 MASPREDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ TFEN ++WL+ELR+ + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V+ EE AE L F+ETSA++ V+ AF +++ +I++ +K
Sbjct: 121 MLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRILTEIYKLMSRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ A+ N + N++ E N K+S CC
Sbjct: 181 TIQAEENASASLPTGNSIAITAE--NTTESQKKKKKSGCC 218
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 151/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ Q+ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQRQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQS----SCC 220
D++A + G +++I T Q CC
Sbjct: 183 --DRSAHDDS----PGNNVVDISVPPTMDGQRGNKLPCC 215
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 142/191 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V +K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+EL++ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V +E K AE L F+ETSA+ + NVE AF Q++ I+ QK + ++
Sbjct: 125 KNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSE 184
Query: 186 MNDKTATSNCN 196
++ + S N
Sbjct: 185 GDNDPSPSRDN 195
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 149/215 (69%), Gaps = 2/215 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +KAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+L GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL + R+V E+ K AE EGL+F+ETSA++ NVE AF+ ++ +I+ +K+L A
Sbjct: 134 KCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 193
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N N +L G K I+ + K++ CC
Sbjct: 194 ENQ--GNGNSASLSGQKIIVPGPAQEIPAKRNMCC 226
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 144/191 (75%), Gaps = 1/191 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQKQIADR 184
Query: 186 -MNDKTATSNC 195
+D++ +N
Sbjct: 185 SAHDESPGNNV 195
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 153/219 (69%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRIVSQK----Q 180
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQS----SCC 220
++D++A + G +++I T Q CC
Sbjct: 181 ISDRSAHEDS----PGNNVVDISVPPTMDGQRGNKLPCC 215
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 148/215 (68%), Gaps = 3/215 (1%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGKS +L+R+ARDEF LDSK TIGVEF R + + K +KAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 71
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGA+GA+LVYDITRR TF++ +WL ELR + I+L+GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNK 131
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R + E+ + AE EGL+F+ETSA NVE AF ++++I +KSL A
Sbjct: 132 SDLVDQRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFNIVNKKSLAASE 191
Query: 187 NDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
+ + N +L G K +I+ +V K + CC
Sbjct: 192 DQENG--NPGSLAGKKIDIVPGPGQVIPNKSNMCC 224
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 150/220 (68%), Gaps = 8/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MG-SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E K AE L F+ETSA+ + NVE AF ++ +I+++ K
Sbjct: 120 MLVGNKSDLRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +T N + +I+ E KQ CC
Sbjct: 180 HVGGDNRAAISTPGSNGI-----VISPTAEPQTKKQ--CC 212
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 154/218 (70%), Gaps = 4/218 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ YD + DY+FK V+IGDSAVGKS LL+RF+R+EF L+SK TIGVEF R + V K IK
Sbjct: 6 NEYDNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDHKTIK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT++ +F++ ++WL ELR + + I+L
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIML 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL++ R+V + + AE E L F+ETSAM++ NVE AF ++++I++ +K+L
Sbjct: 126 IGNKSDLSNLRQVETDTAREFAEKESLSFLETSAMESTNVETAFFTVLSEIYKVVSKKAL 185
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A N N L G K + +V K++ CC
Sbjct: 186 LADENQ----GNSPLLPGTKIKLADKDDVIGAKKAGCC 219
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 150/220 (68%), Gaps = 2/220 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M ++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA ++I K
Sbjct: 1 MASPREDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ TFEN ++WL+ELR+ + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V+ EE AE L F+ETSA++ V+ AF +++ +I++ +K
Sbjct: 121 MLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRILTEIYKLMSRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ A+ N + N++ E N K+S CC
Sbjct: 181 TIQAEENATASLPTGNSIAITAE--NTTESQKKKKKSGCC 218
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 152/219 (69%), Gaps = 4/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ +++ DY+FK V+IGDSAVGKS +L+RFAR++F +DSK TIGVEF R + + K +
Sbjct: 7 GDA-NQKIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSV 65
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR + I+
Sbjct: 66 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVII 125
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNKSDL R V E+ K AE EGL+F+ETSA+Q NVE AF+ ++ +I +K+
Sbjct: 126 LIGNKSDLEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNIVNKKN 185
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A N N +L GK+II K+S CC
Sbjct: 186 LAADENQ--GNGNSASL-SGKKIIVPGPAQEIPKKSMCC 221
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 153/219 (69%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ ++ DY+FK V+IGDSAVGKS +L+RF+ +EF LDSK TIGVEF R + + K +
Sbjct: 8 GDA-NQRIDYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL + R+V E+ K AE EGL+F+ETSA+Q NVE +F+ ++ +I+ +K+
Sbjct: 127 LVGNKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNIVNKKN 186
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A ++ N +L G K II + K + CC
Sbjct: 187 LAA--DESQGNGNSASLLGQKIIIPGPAQEIPAKSNMCC 223
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 157/224 (70%), Gaps = 13/224 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQS----SCC 220
+++D++A ++ G +++I T Q CC
Sbjct: 180 ----QISDRSA----HDESPGNNVVDISLPPTTEGQRGNKLPCC 215
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 156/224 (69%), Gaps = 13/224 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E ++ AE L F+ETSA+ + NVE+AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQS----SCC 220
+ D++A ++ G +++I T Q CC
Sbjct: 180 QIA----DRSA----HDESPGNNVVDISVPPTTDGQKGNKLQCC 215
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 147/215 (68%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ LG ++++ I A ++ CC
Sbjct: 180 ---DQGEGSGPVLGNDRKVLEISKSADAEQKKGCC 211
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 154/215 (71%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK +IGDS VGKSNL RF R+EF L+SK TIGVEFA R++ V K+IKAQI
Sbjct: 7 EDDYDYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +TFEN ++WLRELR+ + ++L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H V+ E+G +LAE E L FMETSA++ NV++AF +++++ +L A+
Sbjct: 127 KSDLRHLVAVSTEDGNLLAERESLSFMETSALEATNVDNAFAEVLSK------STALLAR 180
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K + + + E I++ +V+A K+ CC
Sbjct: 181 RLWKLVIIDQDAVPSKSEKIDVSKDVSAVKKVGCC 215
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 147/215 (68%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T++N +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ S LG + +++I+ + CC
Sbjct: 180 ---DSGDSGQAGLGDRRPVVDINPSQDPETKQGCC 211
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 150/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI--- 181
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
A + + G +++I T Q S CC
Sbjct: 182 -----AERSAHGESPGNNVVDISVPPTTDGQKSNKLQCC 215
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 148/215 (68%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ NVE AF ++ +I++ Q+ +
Sbjct: 125 KSDLRHLRSVPTDEARAFAERHSLSFIETSALDCTNVETAFHNILTEIYRIVSQRPMHDS 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ + N G +I E A +S+CC
Sbjct: 185 PDEDSPPGNS----GPIQISPT--EPNAGSKSNCC 213
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 150/216 (69%), Gaps = 2/216 (0%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
Y DY+FK V+IGDSAVGKS LL+RFAR+EF LDSK TIGVEF R + + K +KAQ
Sbjct: 8 YGPRIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVKAQ 67
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + + I+L+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNNIVIMLIG 127
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK DL + R V E+ + A+ EGL+F+ETSA++ +NVE AFL ++ I++ +K+L A
Sbjct: 128 NKCDLGNLRAVPIEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYRIISKKALIA 187
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
ND N L G K ++ + + +T CC
Sbjct: 188 --NDDQGNGNSALLTGTKLVVPGEEQDVSTNNKYCC 221
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 141/189 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 186 MNDKTATSN 194
+ + N
Sbjct: 185 SGHEESPGN 193
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 153/220 (69%), Gaps = 6/220 (2%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ ++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +
Sbjct: 8 GDA-SQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNKSDL R V E+ K A+ EGL+F+ETSA+Q NVE+AF+ ++ +I +K+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTEIFNIVNKKN 186
Query: 182 LCAKMNDKTATSNCNNLGGGKEII-NIDHEVTATKQSSCC 220
L A + N +L G K II E+ A +S CC
Sbjct: 187 LVA--GEDQINGNPASLSGKKIIIPGPAQEIPA--KSKCC 222
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 149/220 (67%), Gaps = 15/220 (6%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DEE DYLF+ V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KAQI
Sbjct: 5 DEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN +WLRELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL H R V +E K AE L F+ETSA+ + NVE AF ++ +I++ +KSL
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSRKSL--- 181
Query: 186 MNDKTATSNCNNLGGGKE---IINIDHEVT--ATKQSSCC 220
+ N G G + I+I VT + + CC
Sbjct: 182 -------PDSGNSGAGPDDGSTIDIGSTVTENSGNKKPCC 214
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/161 (65%), Positives = 133/161 (82%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ V K++KAQI
Sbjct: 8 EDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDAKVLKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TRR+TFEN ++WLRELR+ + ++L+GN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNIVVMLIGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAF 166
KSDL H V+ ++GK AE E LYFMETSA++ NVE+AF
Sbjct: 128 KSDLRHLVAVSTDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 150/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA +I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQRPNKLQCC 215
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 136/175 (77%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TFEN +WL+ELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+L+GNK+DL H R V E+ + AE EGL F+ETSA++ NVE AF ++++I++
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYR 175
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAIT++YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V EE K AE GL F+ETSA+ + NV+ AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQI 181
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/218 (54%), Positives = 153/218 (70%), Gaps = 13/218 (5%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E DYLFK V+IGDS VGKSNLLSRF ++ F LDSK TIGVEFA R I+V K IKAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIW 72
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYD+T+ TFEN K+WL+ELR+ S + ++L+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL H R V E+ AE+EGL+F+ETSA+ NVE AF ++ +I++ +K L +
Sbjct: 133 IDLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFQTVLAEIYRIISKKPLSS-- 190
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
+ + S NL G+ I +V+AT S+ CC
Sbjct: 191 --EESGSGSGNLREGQSI-----QVSATNSSALTSRCC 221
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 147/215 (68%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T++N +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGG 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+T LG ++++ ID + CC
Sbjct: 183 DAGQTV------LGDRRDMVRIDESEDPKTKQGCC 211
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 150/219 (68%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+R ITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 --DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 153/219 (69%), Gaps = 12/219 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK----Q 180
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQS----SCC 220
++D++ ++ G +++I T Q CC
Sbjct: 181 ISDRSG----HDESPGNNVVDISLPPTTDSQRGGKLPCC 215
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 116/223 (52%), Positives = 155/223 (69%), Gaps = 12/223 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQS---SCC 220
+ D++A ++ G +++I T Q CC
Sbjct: 180 QIA----DRSA----HDESPGNNVVDISVPPTTDGQKNKLPCC 214
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 152/222 (68%), Gaps = 8/222 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M +++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA ++I K
Sbjct: 1 MASPKEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ +FEN ++WL+ELRE + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V EE AE L F+ETSA++ + V+ AF +++ +I++ +K
Sbjct: 121 MLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINID--HEVTATKQSSCC 220
++ A+ N + S G +I D E K+SSCC
Sbjct: 181 TMQAEENQISIPS------GDNIVITSDKTEEGVKKKKSSCC 216
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 152/222 (68%), Gaps = 8/222 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M +++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA ++I K
Sbjct: 165 MASPKEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKT 224
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ +FEN ++WL+ELRE + I
Sbjct: 225 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVI 284
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V EE AE L F+ETSA++ + V+ AF +++ +I++ +K
Sbjct: 285 MLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRK 344
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINID--HEVTATKQSSCC 220
++ A+ N + S G +I D E K+SSCC
Sbjct: 345 TMQAEENQISIPS------GDNIVITSDKTEEGVKKKKSSCC 380
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 154/216 (71%), Gaps = 1/216 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE DYL+K V+IGDS VGKSNLLSRF RDEF L+SK TIGVEFA ++I K+IKAQI
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++R++FEN ++WL+ELR+ + ++LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +EE + +E EG+ ME SA+ + NVE AF +++++I+ ++ + +
Sbjct: 125 KSDLKHLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAFHRILSEIYMLRSERQIANQ 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATK-QSSCC 220
+ T + G + + +D + K +SSCC
Sbjct: 185 HDLTKTTLPIGSQGVRVDPVRVDLDSKGLKRKSSCC 220
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 150/216 (69%), Gaps = 8/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+EL++ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K AE GL F+ETSA+ + NVE AF ++ I+ Q+ + +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 186 MN-DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ D + SN I ++ ++ + +CC
Sbjct: 185 SDSDFSPASNV-------VPITVEPTQNSSNKGACC 213
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 148/215 (68%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V +K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A GL F+ETSA+ NVE AF + +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ + + G + + ATK+ CC
Sbjct: 180 --DQGEQTAGPSQGSAIPLSSSTPPGDATKKGQCC 212
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 151/219 (68%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GDS ++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +
Sbjct: 8 GDS-SQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR + I+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVII 126
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK+DL R V E+ K AE EGL+F+ETSA++ NVE+AFL ++ +I +K+
Sbjct: 127 LIGNKTDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKN 186
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A + A N +L G + I + K + CC
Sbjct: 187 LVA--GEDQANGNPASLTGKRITIPGPAQEIPAKSNMCC 223
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 148/218 (67%), Gaps = 10/218 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I++ K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ +FEN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC-- 183
K+D H R V E+GK A GL F+ETSA++ NV+ AF ++ I+Q KSL
Sbjct: 123 KTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLAEE 182
Query: 184 -AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A + K NN I++ E + SCC
Sbjct: 183 GADVGKKFDPREGNN-------ISLSQEGAKKEDKSCC 213
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 155/224 (69%), Gaps = 13/224 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQS----SCC 220
+ D++A ++ G +++I T Q CC
Sbjct: 180 QIA----DRSA----HDESPGNNVVDISVPPTTDGQKGSKLQCC 215
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 150/220 (68%), Gaps = 18/220 (8%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS-----CC 220
+N GG+++++ + +KQ S CC
Sbjct: 180 ----------DNGEGGQQVLDRRPVIDPSKQDSEQKPGCC 209
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 155/224 (69%), Gaps = 13/224 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQS----SCC 220
+ D++A ++ G +++I T Q CC
Sbjct: 180 QIA----DRSA----HDESPGNNVVDISVPPTTDGQKGSKLQCC 215
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 151/219 (68%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G +EE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R + V K+I
Sbjct: 3 GRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKII 62
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RAITS+YYRGALGA+LVYD+++ TFEN +WL+ELR+ S + I+
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIRIM 122
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNK+DL H R V ++ + AE EGL ++ETSA++ NVE+AF ++ I++ +K
Sbjct: 123 LVGNKTDLRHLRAVATDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKP 182
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +D++ + GK I A ++ CC
Sbjct: 183 VA---SDESGQGAAGGVKEGKTINVATGGDAAAEKKQCC 218
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 156/214 (72%), Gaps = 2/214 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+ DY+FK V+IGDSA GKS LL+RFAR++F LDSK TIGVEF R + + + +KAQIW
Sbjct: 12 QRIDYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIW 71
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR + I+L+GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNK 131
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V E+ K AE E L+FMETSA++ +NVE+AF+ ++ +I++T +K+L A
Sbjct: 132 SDLGTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVA-- 189
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N++ +S ++L G +I+ E +T +++CC
Sbjct: 190 NEEPDSSGNSSLLKGTKIVVPGQEPPSTLKATCC 223
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 150/220 (68%), Gaps = 18/220 (8%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSS-----CC 220
+N GG+++++ + +KQ S CC
Sbjct: 180 ----------DNGEGGQQVLDRRPVIDPSKQDSEQKQGCC 209
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 137/179 (76%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+++V K IKA
Sbjct: 3 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKA 62
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAIT++YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LV
Sbjct: 63 QIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
GNKSDL H R V EE K AE GL F+ETSA+ + NV+ AF ++ +I++ QK +
Sbjct: 123 GNKSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQI 181
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/182 (60%), Positives = 138/182 (75%), Gaps = 1/182 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K
Sbjct: 1 MG-SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E KI AE L F+ETSA+ + NVE AF ++ +I+++ K
Sbjct: 120 MLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNK 179
Query: 181 SL 182
+
Sbjct: 180 HV 181
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 147/214 (68%), Gaps = 5/214 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 65
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGALLVYDIT+R +F++ +WL ELR + I+LVGNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 125
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V+ E+ K AE E L+F+ETSA+Q NVE+AF ++ +I + +K++ A
Sbjct: 126 SDLEEERAVSSEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAA-- 183
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D A +L G K I + +S CC
Sbjct: 184 -DPKANGAAPSLAGKKVI--VPGPAQEIPKSKCC 214
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 140/189 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLF+ V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMVDR 184
Query: 186 MNDKTATSN 194
+ N
Sbjct: 185 PGHDESPGN 193
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 153/224 (68%), Gaps = 13/224 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQS----SCC 220
+ A + ++ G +++I T Q CC
Sbjct: 180 QI--------AERSAHDESPGNNVVDISVPPTTDSQRGGRLQCC 215
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 152/220 (69%), Gaps = 7/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M +EE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V
Sbjct: 1 MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGALGALLVYD+T+ TFEN +WL+ELR+ + + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL H R V E+ + +E EGL F+ETSA++ NVE AF ++ +I++ +K
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SL + ++ A++N I + + + SCC
Sbjct: 181 SLSS---NEPASANIKE----SMTITVGGPQSNASKPSCC 213
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 148/216 (68%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A GL F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ N+G G I ++ + + K CC
Sbjct: 180 ---DSGDGAQANIGAGTNISLSKPADDGSAKGGKCC 212
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 133/169 (78%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 82
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 83 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 142
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I+
Sbjct: 143 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 147/215 (68%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LD+K TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T++N +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ S LG + +++I+ + CC
Sbjct: 180 ---DSGDSGQAGLGDRRPVVDINPSQDPETKQGCC 211
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 147/196 (75%), Gaps = 2/196 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
Query: 181 SLCAK-MNDKTATSNC 195
+ + +D++ +N
Sbjct: 180 QIAERSAHDESPGNNV 195
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 149/220 (67%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + D E DYLFK V+IGDS VGKSN+LSRF R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALL YDIT+R TF+N ++WLRELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L GNKSDL H R V+E++ + L + EGL F+ETSA++ LNV+ AF ++ I+
Sbjct: 121 ILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHI---- 176
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ K + L G IN+ +A + CC
Sbjct: 177 -ISKKALAAQEAAASTALPGQGTTINVSDN-SANVKRGCC 214
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 154/216 (71%), Gaps = 4/216 (1%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
YD + DY+FK V+IGDSAVGKS LLSRF+R+EF L+SK TIGVEF R I V K IKAQ
Sbjct: 8 YDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIKAQ 67
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYDIT++ +F++ ++WL ELR + + I+L+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIG 127
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NKSDL++ R+V+ + ++ AE E L F+ETSAM++ NVE AF ++++I++ + +L A
Sbjct: 128 NKSDLSNLRQVDTDVARVYAEKEKLSFLETSAMESTNVETAFYAVLSEIYKIVSKNALIA 187
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N L G K + +V +K++ CC
Sbjct: 188 DENQ----GGTPLLSGTKINLTDKDDVIGSKRAGCC 219
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 155/224 (69%), Gaps = 13/224 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQS----SCC 220
+ D++A ++ G +++I T Q CC
Sbjct: 180 QIA----DRSA----HDESPGNNVVDISVPPTTDGQKGNKLQCC 215
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 149/217 (68%), Gaps = 8/217 (3%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S D+E DYLFK V+IGDS VGK+NLLSRF R+EF L+SK TIGVEFA R+++V +K +KA
Sbjct: 2 SRDDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKA 61
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN +WL+ELR+ S + ++LV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLV 121
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNKSDL H R V EE K A GL F+ETSA+ + NVE AF +++ +I++ K+L
Sbjct: 122 GNKSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKAL- 180
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+SN + IN++ KQ C
Sbjct: 181 -------ESSNDVIRPTAGQTINVNQPTEDEKQGGGC 210
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 148/214 (69%), Gaps = 5/214 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGKS +L+RFAR+EF +DSK TIGVEF R + + K +KAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIW 64
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGALLVYDIT+R +F++ +WL ELR + I+LVGNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 124
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V+ E+ K AE E L+F+ETSA+Q NVE+AF ++++I + +K++ A
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAA-- 182
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D A +L G K + + +S CC
Sbjct: 183 -DPKANGAAPSLAGKKVV--VPGPAQEIPKSKCC 213
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 152/216 (70%), Gaps = 3/216 (1%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
++++ DY+FK V+IGDSAVGKS LLSRFAR+EF LDSK TIGVEF + + + K IKAQ
Sbjct: 8 FNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQ 67
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R TF++ +WL ELR + I+L+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIG 127
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NKSDL R V E+ K A+ E L FMETSA++ NVE AF ++ +I++ +K+L A
Sbjct: 128 NKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIA 187
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
ND+T + ++L G +I+ E A S CC
Sbjct: 188 --NDETDSGGSSSLLKGTKIVVPGQEPQAAS-SGCC 220
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 145/215 (67%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +G G I AT +S CC
Sbjct: 180 ---DSGDGAQATIGAGTNISLSKPAEDATAKSGCC 211
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 138/172 (80%), Gaps = 1/172 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV-GDKLIKAQIWDT 68
DYLFK V+IGDS VGKSNLLSRF RDEF L+SK TIGVEFA ++I++ +K+IKAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 69 AGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSD 128
AGQER+RAITS+YYRGA+GALLVYDIT++ +FEN +KWL+ELR+ S + I+LVGNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 129 LTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
L H R +N+ E A+ E L F+ETSA++ NVE AF Q++N+I+ +K
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK 180
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 151/214 (70%), Gaps = 10/214 (4%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R + V K+IKAQIWDTA
Sbjct: 17 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTA 76
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGALGA+LVYD+T+ TFEN +WL+ELR+ + + I+LVGNK+DL
Sbjct: 77 GQERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTDL 136
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V ++ AE EGL ++ETSA++ +NVE+AF ++ I++ TI K A D+
Sbjct: 137 KHLRAVTTDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYR-TISKKAVASEEDR 195
Query: 190 TATSNCNNLGGGKEIINIDHEVTAT---KQSSCC 220
A + G KE I+ TA+ ++ CC
Sbjct: 196 AAAA------GVKEGKTINVAATASDGGEKKQCC 223
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 151/219 (68%), Gaps = 4/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ ++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +
Sbjct: 8 GDA-SQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVII 126
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNKSDL R V E+ A+ EGL+F+ETSA+Q NVE AF+ ++ +I +K+
Sbjct: 127 LIGNKSDLEDQRAVPTEDVNEFAQKEGLFFLETSALQATNVESAFMTLLTEIFNIVNKKN 186
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A N + N +L G K II + +K S CC
Sbjct: 187 LIAGENQ--SNGNPASLSGKKIIIPGPAQEIPSK-SKCC 222
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 153/218 (70%), Gaps = 6/218 (2%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKA
Sbjct: 2 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 61
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GALLVYDI + TFEN +WL+ELR+ + I+LV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLV 121
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNKSDL H R V ++ + AE L F+ETSA+ + NVE AF ++ +I++ ++ +
Sbjct: 122 GNKSDLRHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIYRLVSRRPME 181
Query: 184 AKMNDKTATSNCNNLGGG-KEIINIDHEVTATKQSSCC 220
A + + ++G G K I++ + E A ++ S C
Sbjct: 182 A-----GESGDSPSVGQGEKVIVSREDETKAAERKSKC 214
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 150/220 (68%), Gaps = 8/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MG-SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNK DL H R V +E K AE L F+ETSA+ + NVE AF ++ +I+ QK
Sbjct: 120 MLVGNKCDLRHLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNILTEIYHIVSQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + +S +G +D +V K+ CC
Sbjct: 180 QIKDAPQNSEISSQPIVVGP-----TVDSDV--KKKPQCC 212
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 148/211 (70%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DY+FK V+IGDSAVGKSNLL+R+AR+EF +SK TIGVEF +++R+ K +KAQ+WDTA
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGKEVKAQVWDTA 70
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGALGAL+VYDITR+ TFEN KWL ELR + S + +LVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDL 130
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
T+ REV+ EEGK LAE+E L+FMETSA+ + NV+ AF ++ +I ++ + +
Sbjct: 131 TNIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRRIVPDDYDKD 190
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
LG + AT++ SCC
Sbjct: 191 DRVPRGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 149/215 (69%), Gaps = 5/215 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDS VGKS +LSR+AR+EF LDSK TIGVEF R + + K +KAQIW
Sbjct: 11 QKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSVKAQIW 70
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGA+GA+LVYD+TRR TF++ +WL ELR + I+LVGNK
Sbjct: 71 DTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNIVIILVGNK 130
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R ++ E+ K AETEGL+F+ETSA+ +NVE AF ++ +I +K+L A
Sbjct: 131 SDLEDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNIVNKKNLVAGE 190
Query: 187 NDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
+ + +L G K +I+ +V TK CC
Sbjct: 191 GN----GDPGSLAGKKIDIVPGPAQVVPTKSGMCC 221
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 135/177 (76%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E DYLFK V+IGDS VGKSNLLSRF ++ F LDSK TIGVEFA R I V K IKAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIW 72
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYD+T+ ATF+N K+WL+ELR+ S + I+L+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIGNK 132
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
DL H R V +E+ AE EGL F+ETSA+ NV+ AF ++ +I++ +K+L
Sbjct: 133 MDLKHLRSVAQEDAASFAEREGLSFIETSALDATNVDRAFQTVLGEIYRIISKKALS 189
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 137/185 (74%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V +E + AE GL F+ET A+ + NVE AF ++ +I++ QK + + +
Sbjct: 121 RHFRAVPTDEARAFAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMSDRREND 180
Query: 190 TATSN 194
SN
Sbjct: 181 MFPSN 185
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 140/183 (76%), Gaps = 1/183 (0%)
Query: 1 MGDSYDEECD-YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
MGD D E + YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF +++ + K
Sbjct: 3 MGDDSDGEAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGK 62
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
+KAQIWDTAGQERFRA+TS+YYRGA GALLVYDI+RR TF+N +WL+EL + +A
Sbjct: 63 EVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTVA 122
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
+LVGNK DL + REV EEGK LAE+EGL+FMETSA+ + NV AF +I +I+ + +
Sbjct: 123 KMLVGNKCDLDNIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVSR 182
Query: 180 KSL 182
K L
Sbjct: 183 KIL 185
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 135/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ QK+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKAL 179
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 135/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ QK+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKAL 179
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 132/173 (76%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + +T+EN +WL+ELR+ + + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V+ EE K A +GL F+ETSA+ NVE AF ++ I++ KSL
Sbjct: 128 KHLRAVSTEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL 180
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 148/215 (68%), Gaps = 3/215 (1%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDS VGKS +LSR+AR+EF LDSK TIGVEF R + + K +KAQIW
Sbjct: 12 QKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 71
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGA+GA+LVYD+TRR TF++ +WL ELR + I+LVGNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNADKNIVIILVGNK 131
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R ++ E+ K AE EGL+F+ETSA+ +NVE AF ++ +I +KSL A
Sbjct: 132 SDLEDQRAISMEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLTEIFNIVNKKSLVA-- 189
Query: 187 NDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
+ + +L G K +I+ +V TK CC
Sbjct: 190 GEGEGNGDPGSLAGKKIDIVPGPGQVIPTKNKLCC 224
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 148/218 (67%), Gaps = 10/218 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I++ +K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ +FEN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC-- 183
K+D H R V E+GK A GL F+ETSA++ NV+ AF ++ I+Q KSL
Sbjct: 123 KTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLAEE 182
Query: 184 -AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A + K NN I + E + +CC
Sbjct: 183 GADVGKKFDPREGNN-------ITLSQEGRKEESKTCC 213
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 134/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DEE DYLFK V+IGDS VGKSNLL+RF R+EF L+SK TIGVEFA R+I+V K+IKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI ++ T++N ++WL ELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E AE L F+ETSA+ + NVE AF ++ +I+ QK +
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNIVSQKQM 181
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 143/216 (66%), Gaps = 22/216 (10%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K+ AE GL F+ETSA+ + NVE AF ++
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILT-------------- 170
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCCY 221
D SN E I++ VTA + CC+
Sbjct: 171 -GDVLHPSNV-------EPIDVKPTVTADVRKPCCH 198
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 145/213 (68%), Gaps = 19/213 (8%)
Query: 1 MGDSYDEECDYLFK-------------------AVMIGDSAVGKSNLLSRFARDEFRLDS 41
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+S
Sbjct: 1 MGGSRDDEYDYLFKELQGCWVAIPIIPSLQIIKMVLIGDSGVGKSNLLSRFTRNEFNLES 60
Query: 42 KPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFE 101
K TIGVEFA R+I+V K IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+E
Sbjct: 61 KSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYE 120
Query: 102 NTKKWLRELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLN 161
N ++WL+ELR+ S + I+LVGNKSDL H R V +E + AE GL F+ETSA+ + N
Sbjct: 121 NVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTN 180
Query: 162 VEDAFLQMINQIHQTTIQKSLCAKMNDKTATSN 194
VE AF ++ +I++ QK + + + + SN
Sbjct: 181 VEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 213
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 135/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKS+LLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + ++EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R + EE K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRSIPTEEAKAFAERNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQKQM 181
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 148/215 (68%), Gaps = 2/215 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +KAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+L GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL + R+V + K AE EGL+F+ETSA++ NVE AF+ ++ +I+ +K+L A
Sbjct: 134 KCDLENQRDVPTGDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 193
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N N +L G K I+ + K++ CC
Sbjct: 194 ENQ--GNGNSASLSGQKIIVPGPAQEIPAKRNMCC 226
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 141/211 (66%), Gaps = 9/211 (4%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + AT+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V +E K A GL F+ETSA+ NVE AF ++ I++ KSL
Sbjct: 128 KHLRAVPTDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSL------- 180
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
S+ N+ + I++ A K CC
Sbjct: 181 --ESSSTNIEPPTQGISVTAPEPADKGGKCC 209
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 150/215 (69%), Gaps = 3/215 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+ DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + + + K IKAQI
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS+YYRGA+GALLVYDI+R+ TF++ +WL EL + +LVGN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL REV EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K + ++
Sbjct: 128 KSDLKGIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K ++ +N GK+++ E +K+ CC
Sbjct: 188 ELNKQDPASLSN---GKKVVIPSEEQGESKKGGCC 219
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 141/191 (73%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V +K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+ ALLVYDI + T+EN ++WL+EL++ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V +E K AE L F+ETSA+ + NVE AF Q++ I+ QK + ++
Sbjct: 125 KNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSE 184
Query: 186 MNDKTATSNCN 196
++ + S N
Sbjct: 185 GDNDPSPSRDN 195
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 152/219 (69%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD+ ++ DY+FK V+IGDSAVGK+ +L+RFAR+EF LDSK TIGVEF R + + K +
Sbjct: 6 GDA-SQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L GNK+DL R V E+ K A+ EGL+F+ETSAM+ +EDAFL ++ +I +K+
Sbjct: 125 LTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKN 184
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A N + SN +L G K ++ +V K++ C
Sbjct: 185 LAADENQ--SNSNPASLTGKKILVPGPGQVIPGKKACCS 221
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 142/196 (72%), Gaps = 7/196 (3%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIW
Sbjct: 7 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVIMLVGNK 126
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL H R V ++ K AE L F+ETSA+ NVE AF ++ +I+ QK++ +
Sbjct: 127 SDLRHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQKTI---V 183
Query: 187 ND----KTATSNCNNL 198
ND K TSN +
Sbjct: 184 NDDHVAKVPTSNVQTI 199
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 150/219 (68%), Gaps = 7/219 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+ DYLFK V+IGDSAVGKSNLL+RFAR+EF SK TIGVEF + + + K IKAQI
Sbjct: 8 DKADDYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TF++ KWL EL + +LVGN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL +REV+ EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K +
Sbjct: 128 KSDLKDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVM--- 184
Query: 186 MNDKTATSNCNNLGGGKEII---NIDHEVTA-TKQSSCC 220
M+ + LG GK ++ + D E A TK+ CC
Sbjct: 185 MSQELNKPGAPELGNGKTVVLKGDGDQEGNAGTKKGWCC 223
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 145/215 (67%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D T + G + N E +A K CC
Sbjct: 180 --DSGDTPSMPQTGTNIALSN-PTEDSAAKNGKCC 211
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/229 (51%), Positives = 153/229 (66%), Gaps = 21/229 (9%)
Query: 6 DEECDYLFKA------------VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRN 53
++E D+LFKA V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+
Sbjct: 3 NDEYDFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRS 62
Query: 54 IRVGDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREF 113
I++ K IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + ++FEN +WL+ELR+
Sbjct: 63 IQIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRDH 122
Query: 114 CSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
S + I+LVGNK+D H R V+ E+GK A GL F+ETSA++ NV+ AF +++ I
Sbjct: 123 ADSNIVIMLVGNKTDKRHLRAVSTEDGKAFAAEHGLSFIETSALEATNVDLAFQEILTSI 182
Query: 174 HQTTIQKSLC--AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+Q KSL ++ K S NN I++ E + +Q CC
Sbjct: 183 YQIVSSKSLAEEGDVSKKFDPSQGNN-------ISLSQEKSQEEQKGCC 224
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 150/222 (67%), Gaps = 10/222 (4%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G +EE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R + V K+I
Sbjct: 3 GRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKII 62
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RAITS+YYRGALGA+LVYD+++ TFEN +WL+ELR+ S I+
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTRIM 122
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNK+DL H R V ++ + AE EGL ++ETSA++ NVE+AF ++ I++ +K
Sbjct: 123 LVGNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSKKP 182
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEV---TATKQSSCC 220
+ +D+ GG KE ID A + CC
Sbjct: 183 VA---SDEVGAGQ----GGVKEGKTIDVATGADAAAHKKQCC 217
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 137/178 (76%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S +EE D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K++KA
Sbjct: 3 SKEEEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVKA 62
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GAL+VYDI + T+EN ++WL+EL++ + + I+L
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIMLA 122
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
GNK DL H R V+ EE K AE L F+ETSA+ + NVE AF ++ +I+ IQK+
Sbjct: 123 GNKCDLRHLRAVSTEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILTEIYNIVIQKA 180
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 147/211 (69%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DY+FK V+IGDSAVGKSNLL+R+AR+EF +SK TIGVEF +++R+ K +KAQ+WDTA
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGKEVKAQVWDTA 70
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGALGAL+VYDITR+ TFEN KWL ELR + S + +LVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDL 130
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
T REV+ EEGK LAE+E L+FMETSA+ + NV+ AF ++ +I ++ + +
Sbjct: 131 TDIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRRIVPDDYDKD 190
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
LG + AT++ SCC
Sbjct: 191 DRVPRGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 135/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKS+LLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + ++EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R + EE K AE GL F+ETSA+ + NVE AF ++ +I++ Q+ +
Sbjct: 125 KSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQM 181
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 150/217 (69%), Gaps = 8/217 (3%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S D+E DYLFK V+IGDS VGK+NLLSRF R+EF L+SK TIGVEFA R+++V +K +K+
Sbjct: 2 SRDDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKS 61
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN +WL+ELR+ S + ++LV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLV 121
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNKSDL H R V EE K A GL F+ETSA+ + NVE AF +++ +I++ K+L
Sbjct: 122 GNKSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALE 181
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + T+ + IN++ KQ C
Sbjct: 182 SSNDVIRPTAG--------QTINVNQPTEDEKQGGGC 210
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 138/172 (80%), Gaps = 1/172 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV-GDKLIKAQIWDT 68
DYLFK V+IGDS VGKSNLLSRF RDEF L+SK TIGVEFA ++I++ +K+IKAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 69 AGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSD 128
AGQER+RAITS+YYRGA+GALLVYDIT++ +FEN +KWL+ELR+ S + I+LVGNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 129 LTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
L H R +N+ E A+ E L F+ETSA++ NVE AF Q++N+I+ +K
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK 180
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 148/215 (68%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS GKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T++N +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALEGE 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
S ++G ++II+I+ + CC
Sbjct: 183 -------SGGASVGERRQIIDIEKTQDTENKGGCC 210
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 140/187 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+E+ DYLFK V+IGDS VGKSN+LSRF R EF L+S+ TIGVEFA +++R+G K++KAQI
Sbjct: 9 EEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQI 68
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++R++FEN +WL+ELRE S + ++LVGN
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGN 128
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL+H R V E+E K L F+ETSA++ NVE+AF +++ I++ K +
Sbjct: 129 KCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLR 188
Query: 186 MNDKTAT 192
T +
Sbjct: 189 AGADTPS 195
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 140/187 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+E+ DYLFK V+IGDS VGKSN+LSRF R EF L+S+ TIGVEFA +++R+G K++KAQI
Sbjct: 9 EEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQI 68
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++R++FEN +WL+ELRE S + ++LVGN
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGN 128
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL+H R V E+E K L F+ETSA++ NVE+AF +++ I++ K +
Sbjct: 129 KCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLR 188
Query: 186 MNDKTAT 192
T +
Sbjct: 189 AGADTPS 195
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 147/214 (68%), Gaps = 5/214 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSVKAQIW 65
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGALLVYDIT+R +F++ +WL ELR + I+LVGNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 125
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V+ E+ K AE E L+F+ETSA+Q NVE+AF ++ +I + +K++ A
Sbjct: 126 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAA-- 183
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D A +L G K I + +S CC
Sbjct: 184 -DPRANGAAPSLAGKKVI--VPGPAQEIPKSKCC 214
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 150/218 (68%), Gaps = 8/218 (3%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S ++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KA
Sbjct: 2 SREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKA 61
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+EL++ S + I+LV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLV 121
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNKSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ I+ Q+ +
Sbjct: 122 GNKSDLRHLRAVPIDEARAFAEKYGLSFLETSALDSSNVELAFHTILTAIYNIVSQRQMS 181
Query: 184 AKMN-DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + D + SN I ++ T + + CC
Sbjct: 182 GRSDSDFSPASNVVP-------ITVEPTQTLSNKGVCC 212
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 132/170 (77%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DEE DYLFK V+IGDS VGKSNLL+RF R+EF L+SK TIGVEFA R+I+V K+IKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI ++ T++N ++WL ELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
KSDL H R V +E AE L F+ETSA+ + NVE AF ++ +IH+
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIHR 174
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 136/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAIT++YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 64 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V E+ + AE + L F+ETSA+ + NVE AF ++ +I++ QK L
Sbjct: 124 KSDLRHLRAVPTEDARNYAERQSLSFIETSALDSTNVETAFQNILTEIYKIVSQKQL 180
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 134/178 (75%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKA
Sbjct: 3 SKDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 62
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+ V
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMAV 122
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
GNK DL H R V EE K +E GL F+ETSA+ + NVE AF ++ +I+ Q S
Sbjct: 123 GNKCDLRHLRAVPTEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQSS 180
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 154/219 (70%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD ++++ DY+FK V+IGDSAVGKS LL+RFAR+EF +DSK TIGVEF + + + K +
Sbjct: 6 GD-FNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ +WL ELR + I+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNKSDL R V E+ + AE E L+FMETSA++ NVE AFL ++ I++ +K+
Sbjct: 125 LIGNKSDLGSLRAVPTEDAQEFAERENLFFMETSALEATNVETAFLTVLTDIYKIISKKT 184
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A N T ++ + L G +II +A ++ CC
Sbjct: 185 LTA--NTDTDSTGSSTLLKGTKIIVPGGPDSAAQKGGCC 221
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 138/172 (80%), Gaps = 1/172 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV-GDKLIKAQIWDT 68
DYLFK V+IGDS VGKSNLLSRF RDEF L+SK TIGVEFA ++I++ +K+IKAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 68
Query: 69 AGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSD 128
AGQER+RAITS+YYRGA+GALLVYDIT++ +FEN +KWL+ELR+ S + I+LVGNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 129 LTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
L H R +N+ E A+ E L F+ETSA++ NVE AF Q++N+I+ +K
Sbjct: 129 LKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK 180
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 141/180 (78%), Gaps = 5/180 (2%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV-GDKL 60
GD YD YLFK V+IGDS VGKSNLLSRF RDEF L+SK TIGVEFA ++I++ +K+
Sbjct: 1 GDYYD----YLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKI 56
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT++ +FEN +KWL+ELR+ S + I
Sbjct: 57 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVI 116
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R +N+ + A+ E L F+ETSA++ NVE AF Q++N+I+ +K
Sbjct: 117 LLVGNKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK 176
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 134/173 (77%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ + + T+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEEQRPTL 177
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 157/221 (71%), Gaps = 5/221 (2%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD Y+++ DY+FK V+IGDSAVGK+ LL+RFAR+EF +DSK TIGVEF + + + +K +
Sbjct: 6 GD-YNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ KWL ELR + I+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK DL R V E+ + A+ E L+FMETSA++ NVE AFL ++ +I++ +KS
Sbjct: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKS 184
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCCYK 222
L A +D A N + L G + II + E + K+ CC K
Sbjct: 185 LTA--DDDDADGNSSLLKGTRIIIPSEQE--SGKRGGCCGK 221
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MG-SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + I
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQT 176
+LVGNKSDL H R V +E K AE L F+ETSA+ + NVE AF ++ +I+++
Sbjct: 120 MLVGNKSDLRHLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIYRS 175
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D + N G ++ + A K CC
Sbjct: 180 --DSGDGAQANIAAGTSLSLSKPADENADKGGKCC 212
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 148/216 (68%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ S +G G I ++ + A+K CC
Sbjct: 180 ---DSGDSAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 145/215 (67%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T++N +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V E+ K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N LG ++++ I + CC
Sbjct: 180 ---DQGEGGQNPLGERRQVVEISKTQDTETKQGCC 211
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 146/214 (68%), Gaps = 5/214 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +KAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 64
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGALLVYDIT+R +F++ +WL ELR + I+LVGNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVGNK 124
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V+ E+ K AE E L+F+ETSA+Q NVE AF ++++I + +K++ +
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLSEIFKIHSKKNI---V 181
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D A L G K + + +S CC
Sbjct: 182 TDPKANGAAPPLAGKK--VLVPGPAQEIPKSKCC 213
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 138/177 (77%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V +K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI+++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V+ ++ K A GL F+ETSA+ NVE AF Q + +I++ K+L
Sbjct: 123 KSDLRHLRAVSTDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVSSKAL 179
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 153/215 (71%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+ DYLFK V+IGDSAVGKSNLLSR+AR+EF L+SK TIGVEF +++ + K IKAQI
Sbjct: 6 DKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDGKEIKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS+YYRGA+GAL+VYDI+R+ TF+N +WL ELR + + ++LVGN
Sbjct: 66 WDTAGQERFRAVTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASVVVMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL + REV++EE +LA+ E + F+ETSAM NV +AF ++ +I++ +K L +
Sbjct: 126 KCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKPLTSS 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ K+ T LG + + ID + +CC
Sbjct: 186 VSMKSNTV----LGSSQRLAGIDD---IQPKRNCC 213
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 132/170 (77%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 133 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 192
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 193 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 252
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ H+
Sbjct: 253 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTGRHR 302
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 149/221 (67%), Gaps = 8/221 (3%)
Query: 5 YDEEC---DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
Y+EE DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + + + K +
Sbjct: 4 YNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEV 63
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL + +
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL +REV EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K
Sbjct: 124 LVGNKSDLKDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILSRKV 183
Query: 182 LCAKMNDKTATSNCNNLGGGKEII--NIDHEVTATKQSSCC 220
+ ++ K T N GK ++ D EV + CC
Sbjct: 184 MMSQELKKQDTPWTEN---GKTVVLQEGDREVEVESKKGCC 221
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 140/187 (74%), Gaps = 1/187 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTA
Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 62
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+R ITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL
Sbjct: 63 GQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 122
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK-MND 188
H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + + +D
Sbjct: 123 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHD 182
Query: 189 KTATSNC 195
++ +N
Sbjct: 183 ESPGNNV 189
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 151/216 (69%), Gaps = 3/216 (1%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
++++ DY+FK V+IGDSAVGKS LLSRFAR+EF LDSK TIGVEF + + + K IKAQ
Sbjct: 8 FNQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQ 67
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R TF++ +WL ELR + I+L+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIG 127
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NKSDL R V E+ K A+ E L FMETSA++ NVE AF ++ +I++ +K+L A
Sbjct: 128 NKSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIA 187
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
ND+T + ++L G + + E A S CC
Sbjct: 188 --NDETDSGGSSSLLKGTKXVVPGQEPQAA-SSGCC 220
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 139/183 (75%), Gaps = 1/183 (0%)
Query: 1 MGDSYDEECD-YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
MGD D E + YLFK V+IGDSAVGKSNLLSR+AR+EF SK TIGVEF + + + K
Sbjct: 1 MGDDSDGEAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSK 60
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
+KAQIWDTAGQERFRA+TS+YYRGA GALLVYD++RR+TF+N +WL+EL + +A
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
+LVGNK DL + REV EEGK LAE+EGL+FMETSA+ + NV AF +I +I+ + +
Sbjct: 121 KMLVGNKCDLENIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSR 180
Query: 180 KSL 182
K L
Sbjct: 181 KIL 183
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 151/215 (70%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNL SRF R+EF L+SK TIGVEFA R + V +++KAQI
Sbjct: 6 EEEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGALGALLVYD+T+ +FEN +WL+ELR+ + + I+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ + AE EGL F+ETSA++ NV+ AF ++ QI++ +KSL +
Sbjct: 126 KTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIISKKSLSSS 185
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D +A N+ G I I+ + SCC
Sbjct: 186 STDPSAP----NIKQGN-TITIEGGLQPNTSKSCC 215
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 139/183 (75%), Gaps = 1/183 (0%)
Query: 1 MGDSYDEECD-YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
MGD D E + YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF +++ + K
Sbjct: 1 MGDESDGEAEEYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGK 60
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
+KAQIWDTAGQERFRA+TS+YYRGA GALLVYDI+RR+TF+N +WL+EL + +A
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
+LVGNK DL + REV EEGK LAE EGL+FMETSA+ NV AF +I +I+ + +
Sbjct: 121 KMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSR 180
Query: 180 KSL 182
K L
Sbjct: 181 KIL 183
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 149/218 (68%), Gaps = 6/218 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+ DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + + + K IKAQI
Sbjct: 8 DKAEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL + +LVGN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL +REV EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K + ++
Sbjct: 128 KSDLKDAREVPTVEGKDLAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVILSQ 187
Query: 186 MNDKTATSNCNNLGGGKEII---NIDHEVTATKQSSCC 220
+K LG GK ++ + + E A + CC
Sbjct: 188 ELNKPGAP---ELGNGKTVVLQGDGNQEGNAETKKGCC 222
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 133/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K AE L F+ETSA+ + NVE AF ++ +I++ K +
Sbjct: 125 KSDLRHLRAVPTDEAKNFAERNALSFIETSALDSTNVETAFQNILTEIYRIVSXKQI 181
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 146/216 (67%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ +G G I + + +A K CC
Sbjct: 180 ---DSGDGPQATIGAGPGISLTKPADDSAEKSGKCC 212
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 149/215 (69%), Gaps = 3/215 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+ DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + + + K IKAQI
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TF + +WL EL + +LVGN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL REV+ EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K + ++
Sbjct: 128 KSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K ++ +N GK+++ +K+ CC
Sbjct: 188 ELNKQDPASLSN---GKKVVIPSDGQGESKKGGCC 219
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 153/219 (69%), Gaps = 2/219 (0%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD Y ++ DY+FK V+IGDSAVGKS LL+RFAR+EF LDSK TIGVEF + + + K +
Sbjct: 7 GD-YSQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVIDHKTV 65
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL+ELR + I+
Sbjct: 66 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVIM 125
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL + V E+ K AE E L+FMETSA++ NVE AFL ++ +I++ +K+
Sbjct: 126 LVGNKSDLGTLQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKKT 185
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L A + + N + L G K I+ + + +CC
Sbjct: 186 LVAN-EEVESGGNSSLLKGTKIIVPGKEPKSEGSKYNCC 223
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 152/217 (70%), Gaps = 3/217 (1%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
Y+ + DY+FK V++GDSAVGK+ LL+RFA+++F +DSK TIGVEF + + + K +KAQ
Sbjct: 8 YNHKIDYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKTVKAQ 67
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+TRR +F+N KWL ELR + ++L+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKNIVVMLIG 127
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK DL R V E+ + A+ E L+FMETSA+++ NVE AFL ++ +I++ +K+L A
Sbjct: 128 NKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLVSKKTLTA 187
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTA-TKQSSCC 220
ND S + L G +II ++ A K+ CC
Sbjct: 188 --NDDADPSGISGLLKGTKIIVPSQDINAGEKKGGCC 222
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 148/216 (68%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ ++G G I ++ + +A K CC
Sbjct: 180 ---DSGDGAQASIGTGPSIALSKPADDSAEKSGKCC 212
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 154/216 (71%), Gaps = 2/216 (0%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
++++ DY+FK V+IGDSAVGKS LL+RFAR+EF +DSK TIGVEF + + + +K +KAQ
Sbjct: 7 FNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDNKTVKAQ 66
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ +WL ELR + I+L+G
Sbjct: 67 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIG 126
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK DL R V E+ + A+ E L+FMETSA+++ NVE AFL ++ +I++ +K+L A
Sbjct: 127 NKCDLGSLRAVPIEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRVISKKTLTA 186
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N++ T+ + L G II H+ K+ CC
Sbjct: 187 --NEELDTNGTSGLLKGTRIIVPGHDQAPAKKGGCC 220
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 144/213 (67%), Gaps = 11/213 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + AT+ N +WL+ELR+ + + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V +E K A GL F+ETSA+ NVE AF ++ I++ KSL
Sbjct: 128 KHLRAVPTDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSL------- 180
Query: 190 TATSNCNNLGGGKEIIN--IDHEVTATKQSSCC 220
S+ +N+ KE I+ I + + +CC
Sbjct: 181 --ESSTSNIEPPKESISVGITQDTKQQQGKTCC 211
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A GL F+ETSA+ NVE AF + +I++ K++
Sbjct: 123 KSDLRHLRAVPTEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAI--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ S G + A+K+ CC
Sbjct: 180 --EQGEPSQGPGQGTSIPLGPSHPPGDASKKGQCC 212
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 152/215 (70%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R I V IKAQI
Sbjct: 5 NDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDIT+ ++E+ +KWL+ELR+ + + I+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIMLIGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL H R V E+ ++ A EGL F ETSA+++ NVE AF Q++ ++ Q +KS +
Sbjct: 125 KCDLKHLRCVQTEDARLFAANEGLSFTETSALESTNVELAFHQILTEVFQIVSKKSQSNE 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
ND++ + + E+ I+ V +K S CC
Sbjct: 185 SNDQSQRHGSSTI----EVNAINDGVKKSK-SQCC 214
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 147/215 (68%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD T+ TF N ++WL+ELRE + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K D H R + ++G AET L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KIDQKHVRAIKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ TS N L G ++++ I A + CC
Sbjct: 180 ---ENGTSGQNPL-GDRKVVEITKSQDADAKQKCC 210
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/184 (57%), Positives = 137/184 (74%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
+ FK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAG
Sbjct: 140 HFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 199
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL
Sbjct: 200 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 259
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + + +
Sbjct: 260 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDM 319
Query: 191 ATSN 194
+ SN
Sbjct: 320 SPSN 323
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 136/170 (80%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+E+ DYLFK V+IGDS VGKSN+LSRF R EF L+S+ TIGVEFA +++R+G K++KAQI
Sbjct: 9 EEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQI 68
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++R++FEN +WL+ELRE S + ++LVGN
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGN 128
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
K DL+H R V E+E K L F+ETSA++ NVE+AF +++ I++
Sbjct: 129 KCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYK 178
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 132/169 (78%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 82
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 83 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 142
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I+
Sbjct: 143 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 134/174 (77%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E DYLFK V+IGDS VGKSNLLSRF R+ F LDSK TIGVEFA R I+V K++KAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYD+T+ TFEN K+WL+ELR+ S + ++L+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
DL H R V+ E+ AE EGL F+ETSA+ NV+ AF ++ +I++ +K
Sbjct: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKK 186
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 146/215 (67%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++R T++N +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ T GG +I K + CC
Sbjct: 183 DAAQAPT-------GGVKIDMAPSGTPDAKGNKCC 210
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 132/175 (75%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF DSK TIGVEFA R++ V K++KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI+++ TF N +WL+ELR+ S + ++LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
H R V +E K A GL F+ETSA+ NVE AF Q++ I++ KSL A
Sbjct: 128 KHLRAVLTDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYRIVSSKSLDA 182
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 135/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ TF N ++WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V ++ K A GL F+ETSA+ NVE AF Q + +I++ K+L
Sbjct: 123 KSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKAL 179
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 147/216 (68%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ +G G I ++ + A+K CC
Sbjct: 180 ---DSGDGAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 129/173 (74%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + AT+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V EE K + GL F+ETSA+ NVE AF ++ I++ KSL
Sbjct: 128 KHLRAVPTEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL 180
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 154/220 (70%), Gaps = 4/220 (1%)
Query: 5 YD--EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
YD E+ DY+FK V+IGDSAVGK+ +LSRFA++EF DSK TIGVEF R + + K+IK
Sbjct: 23 YDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINAKVIK 82
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RA+TS+YYRGALGA+LVYDIT+R +F++ +W+ ELR S + I+L
Sbjct: 83 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIML 142
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNK+DL R V E+ AE +GL+F ETSA+ NVE AFL+++ +I++ +K+L
Sbjct: 143 VGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKAL 202
Query: 183 CAKMNDKTATSNCNNLGGGKE--IINIDHEVTATKQSSCC 220
+ + +N +L G K I+ + E++ K+ S C
Sbjct: 203 ECGLGKENGDTNVASLKGTKVDIILGPELEISEMKKLSSC 242
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 142/199 (71%), Gaps = 2/199 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +KAQI
Sbjct: 12 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 71
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R TF++ +WL ELR + I+L+GN
Sbjct: 72 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGN 131
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL R+V E+ K AE EGL+F+ETSA++ NVE AF+ ++ +I+ +K+L A
Sbjct: 132 KCDLESQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 191
Query: 186 MNDKTATSNCNNLGGGKEI 204
N N +L G K I
Sbjct: 192 ENQ--GNGNSASLSGQKII 208
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 141/213 (66%), Gaps = 10/213 (4%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L++K TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAIT++YYRGA+GALLVYDI++ AT+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V EE K A GL F+ETSA+ NVE AF ++ I++ KSL +
Sbjct: 128 KHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSDDPI 187
Query: 190 TATSNCNNLGGGKEIINIDHEV--TATKQSSCC 220
TS + I + H V A CC
Sbjct: 188 KPTSG--------DTITVSHSVDTPANAGGKCC 212
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 133/163 (81%), Gaps = 1/163 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV-GDKLIKAQIWDT 68
DYLFK V+IGDS VGKSNLLSRF RDEF L+SK TIGVEFA ++I++ DK+IKAQIWDT
Sbjct: 9 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDT 68
Query: 69 AGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSD 128
AGQER+RAITS+YYRGA+GALLVYDIT++ TFEN +KWL+ELR+ S + I+LVGNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSD 128
Query: 129 LTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMIN 171
L H R +N+ + A+ E L F+ETSA++ NVE AF Q++N
Sbjct: 129 LKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLN 171
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 146/216 (67%), Gaps = 7/216 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ +G G I + + +A K CC
Sbjct: 180 ---DSGDGPQATIGAGPGISLTKPADDSAEKGGKCC 212
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 149/214 (69%), Gaps = 5/214 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +KAQIW
Sbjct: 5 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSVKAQIW 64
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGALLVYDIT+R +F++ +WL ELR + I+LVGNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 124
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V+ E+ K AE E ++F+ETSA+Q NVE+AF ++++I + +K++ A
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENVFFLETSALQATNVENAFQTVLSEIFKIHSKKNIAA-- 182
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ A + +L G K + + +S CC
Sbjct: 183 -EPKANGSAPSLAGKK--VLVPGPAQEIPKSKCC 213
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 147/215 (68%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V +K +KAQI
Sbjct: 5 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN + WL+EL++ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E K AE GL F+E SA+ + NVE AF ++ +I++ Q+ L
Sbjct: 125 KSDLRHLRAVPTDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILTEIYRIVSQRQLAGG 184
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + G E I + +++ CC
Sbjct: 185 QPESEFSH-----GTTIEPIKVLPTQQGARETPCC 214
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 151/213 (70%), Gaps = 10/213 (4%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLL+RFAR+EF +SK TIGVEF + + + K IKAQIWDTA
Sbjct: 12 EYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTA 71
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDITRR++F++ K+WL EL C + A +LVGNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCDL 131
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
+ REV+ EEGK LAE E L+FMETSA+ + NVE AF +I +I+ +K+L +
Sbjct: 132 ENIREVSREEGKTLAEEESLFFMETSALDSTNVEAAFEVVIREIYHNMSRKTLNSDSYKA 191
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQS--SCC 220
T N +L + + ++KQS SCC
Sbjct: 192 ELTVNRVSL--------VKNNANSSKQSSFSCC 216
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/227 (51%), Positives = 151/227 (66%), Gaps = 20/227 (8%)
Query: 6 DEECDYLFKA--------VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVG 57
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V
Sbjct: 5 DDEYDYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 64
Query: 58 DKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSC 117
K IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S
Sbjct: 65 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN 124
Query: 118 MAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTT 177
+ I+LVGNKSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++
Sbjct: 125 IVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIV 184
Query: 178 IQKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
QK + D+ A ++ G +++I T Q CC
Sbjct: 185 SQKQIA----DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 223
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 147/212 (69%), Gaps = 8/212 (3%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V++GDS VGK+N+LSRF R+EF +DSK TIGV+FA + I V +K++KAQ+WDTA
Sbjct: 8 DYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQLWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQ+R+RAIT++YYRGA+GALLVYDITRR T++N +WL+ELR+F + I+LVGNKSDL
Sbjct: 68 GQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V+ EE + GL F+ETSA+ + NV++AF ++N I + + L N+
Sbjct: 128 KHIRAVSTEEAAAFSAEHGLSFLETSALDSSNVDEAFNTVVNDIFKIVSAQQLERSENEV 187
Query: 190 TATSNCNNLGGGKEIINIDHEV-TATKQSSCC 220
+A G I ID+ T T + CC
Sbjct: 188 SAP-------GAGAPIKIDNSTETQTTKGGCC 212
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I LVGN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
KSDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 134/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL 179
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 138/179 (77%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DYLFK V+IGDS VGKSN+LSRF R EF L+S+ TIGVEFA +++R+G+K++KAQIW
Sbjct: 13 EDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKAQIW 72
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYDI++R++F+N +WL+ELRE S + ++LVGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLVGNK 132
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
DL+H R + EEE + L F+ETSA++ NVE+AF ++ I++ K ++
Sbjct: 133 CDLSHLRAIEEEEAEKFCSDNDLLFIETSALEATNVEEAFQNILEDIYKVNSSKPTPSQ 191
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/166 (63%), Positives = 131/166 (78%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTA
Sbjct: 18 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 77
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL
Sbjct: 78 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 137
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++
Sbjct: 138 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 183
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 142/186 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R + V +++KAQI
Sbjct: 6 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGALGALLVYD+T+ +FEN +WL+ELR+ + + I+L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V E+ + AE EGL F+ETSA++ NV+ AF ++ QI++ +KSL +
Sbjct: 126 KTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIISKKSLSSS 185
Query: 186 MNDKTA 191
D +A
Sbjct: 186 STDPSA 191
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 145/206 (70%), Gaps = 7/206 (3%)
Query: 3 DSYDEEC---DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
D Y EE DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + + + K
Sbjct: 2 DVYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
+KAQIWDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TF++ KWL EL +
Sbjct: 62 EVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVV 121
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
+LVGNKSDL +REV+ EGK LAET+ L+FMETSA+ + NV AF ++ +I+ +
Sbjct: 122 TILVGNKSDLKDAREVSTAEGKALAETQDLFFMETSALDSSNVTAAFQTVVREIYNILSR 181
Query: 180 KSLCAKMNDKTATSNCNNLGGGKEII 205
K + + N + A +G GK ++
Sbjct: 182 KVMSNEFNKQDAPL----MGNGKTVV 203
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 152/217 (70%), Gaps = 15/217 (6%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+ GDS VGKSNLLSRF R++F DS+ TIGVEFA R+I+ DK++KAQI
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQE S+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + I+LVGN
Sbjct: 67 WDTAGQE------SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 120
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R ++ EE K AE E +FMETSA++ +NV++AF +++ QI++ +K+L A
Sbjct: 121 KADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAG 180
Query: 186 MNDKTATSNCN--NLGGGKEIINIDHEVTATKQSSCC 220
+ TA N+GG +I +A K+ CC
Sbjct: 181 DDPTTALPKGQMINVGGRDDI-------SAVKKPGCC 210
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 139/183 (75%), Gaps = 1/183 (0%)
Query: 1 MGDSYDEECD-YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
MGD + E + YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF +++ + K
Sbjct: 1 MGDESEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGK 60
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
+KAQIWDTAGQERFRA+TS+YYRGA GALLVYDI+RR+TF+N +WL+EL + +A
Sbjct: 61 DVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
+LVGNK DL + REV EEGK LAE EGL+FMETSA+ + NV AF +I +I+ +
Sbjct: 121 KMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSR 180
Query: 180 KSL 182
K L
Sbjct: 181 KIL 183
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 140/212 (66%), Gaps = 10/212 (4%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + AT+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V +E K A L F+ETSA+ NVE AF ++ I++ KSL
Sbjct: 128 KHLRAVPTDEAKSFAAENNLSFIETSALDASNVESAFQTILTDIYRIVSSKSL------- 180
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSS-CC 220
S+ N + + + V T Q + CC
Sbjct: 181 --ESSANPIEPPNSSVTVSATVDPTPQGNKCC 210
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 140/183 (76%), Gaps = 1/183 (0%)
Query: 1 MGDSYDEECD-YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
M S DE + YLFK V+IGDSAVGKSNLLSR+AR+EF + SK TIGVEF +++ + K
Sbjct: 1 MSSSEDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSK 60
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
+KAQIWDTAGQERFRA+TS+YYRGA+GAL+VYDITRR TF++ +WL EL+ C + +A
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVA 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
++LVGNK DL + R V+ EEGK LAE +GL+FMETSA+ + NV AF +I +I+ +
Sbjct: 121 MMLVGNKCDLENIRAVSIEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVIREIYNNVSR 180
Query: 180 KSL 182
K L
Sbjct: 181 KVL 183
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 130/173 (75%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + T+EN +WL+ELR+ + + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V+ +E K A GL F+ETSA+ NVE AF ++ I++ KSL
Sbjct: 128 KHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL 180
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 152/214 (71%), Gaps = 11/214 (5%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV-GDKLIKAQIWDTA 69
+ + V+IGDS VGKSNLLSRF RDEF L+SK TIGVEFA ++I++ DK+IKAQIWDTA
Sbjct: 3 FFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTA 62
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDIT++ TFEN +KWL+ELR+ S + I+LVGNKSDL
Sbjct: 63 GQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDL 122
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R +N+ + A+ E L F+ETSA++ NVE AF Q++N+I+ QK K D
Sbjct: 123 KHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVR-QKKQATKSED- 180
Query: 190 TATSNCNNLGGGKEIINIDH---EVTATKQSSCC 220
N N GK+ IN+D+ E ++ CC
Sbjct: 181 ----NVNIQPRGKK-INVDNDNDEDEKKTKTKCC 209
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 148/215 (68%), Gaps = 3/215 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+ DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + + + K IKAQI
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TF + +WL EL + +LVGN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL REV+ EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K + ++
Sbjct: 128 KSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K ++ +N GK+++ K+ CC
Sbjct: 188 ELNKQDPASLSN---GKKVVIPSDGQGEFKKGGCC 219
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 137/172 (79%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF +++ + K +KAQIWDT G
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTG 73
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QERFRA+TS+YYRGA+GAL+VYDI+RR TF++ +WL EL+ C + +A++LVGNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLD 133
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+ R+V+ EEGK LAE+EGL+FMETSA+ + NV+ AF +I +I+ +K L
Sbjct: 134 NIRDVSIEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVL 185
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 134/178 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+E+ ++WL+ELR+ + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
K+DL H R V +E K AE L F+ETSA+ + NVE AF Q++ I+ +K +
Sbjct: 125 KNDLRHLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQILTDIYHIVSRKQMA 182
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 133/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ TFEN +WL+ELR+ + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V E+ K AE L F+ETSA+ NVE AF ++ +I++ K+
Sbjct: 123 KSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNF 179
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 130/173 (75%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + T+EN +WL+ELR+ + + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V+ +E K A GL F+ETSA+ NVE AF ++ I++ KSL
Sbjct: 128 KHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL 180
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 133/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ TFEN +WL+ELR+ + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V E+ K AE L F+ETSA+ NVE AF ++ +I++ K+
Sbjct: 123 KSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNF 179
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 148/221 (66%), Gaps = 5/221 (2%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G + DYLFK V++GDS+VGKSNLL+RFAR+EF +SK TIGVEF + + + K I
Sbjct: 4 GGDEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKEI 63
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRA+TS+YYRGA+GALLVYDITRR TF++ +WL EL + +
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSDMNVVTI 123
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK+DL H+REV+ EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K
Sbjct: 124 LIGNKTDLKHAREVSPAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVKEIYSILSRKV 183
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSS--CC 220
++ K S +L GK ++ +AT CC
Sbjct: 184 FQSQEQKK---SELQSLSNGKAVVLQSDAPSATSSGGRWCC 221
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 144/215 (66%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IK+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V EE K A L F+ETSA+ NVE AF ++ +I + K+L
Sbjct: 123 KSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + N ++++ I + CC
Sbjct: 180 ----DSGDSAQNPLSDRKVVEITKTQDPESKQGCC 210
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 134/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL 179
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 135/177 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V +K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALL YD+T+ TF+N +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V ++ K A GL F+ETSA+ NVE AF Q + +I++ K+L
Sbjct: 123 KSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKAL 179
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 141/206 (68%), Gaps = 8/206 (3%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQIWDTAGQER+R
Sbjct: 89 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR 148
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGNKSDL H R V
Sbjct: 149 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSV 208
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC-AKMNDKTATSN 194
+E K+ AE GL F+ETSA+ + NVE AF ++ +I++ QK + D SN
Sbjct: 209 PTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPSN 268
Query: 195 CNNLGGGKEIINIDHEVTATKQSSCC 220
E I++ VTA + CC
Sbjct: 269 V-------EPIDVKPTVTADVRKQCC 287
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV 56
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 152/217 (70%), Gaps = 9/217 (4%)
Query: 6 DEEC--DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
DEE DYLFK V++GDS+VGKSNLL+RFAR+EF +SK TIGVEF + + + K IKA
Sbjct: 6 DEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKA 65
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL + +LV
Sbjct: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILV 125
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNK+DL H+REV+ EGK LAE++GL+FMETSA+ + NV +AF ++ +I+ +K L
Sbjct: 126 GNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKDLM 185
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ CN +G G +++ ++ ++ +C
Sbjct: 186 TE-------PWCNAMGLGDTSVHVLLQLNSSTYLTCV 215
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 132/169 (78%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIW
Sbjct: 3 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 62
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAG ER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNK
Sbjct: 63 DTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 122
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
SDL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++
Sbjct: 123 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYR 171
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 127/173 (73%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + AT+ N +WL+ELR+ + + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V EE K A L F+ETSA+ NVE AF ++ I++ K+L
Sbjct: 128 KHLRAVPTEEAKTFATENELSFIETSALDASNVESAFQTILTDIYRIVSSKTL 180
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 145/215 (67%), Gaps = 3/215 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + I + K IKAQI
Sbjct: 8 DRSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS+YYRGA+GALLVYDI+R+ TF + +WL EL + +LVGN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL REV EGK LAE +GL+FMETSA + NV AF ++ +I+ +K + ++
Sbjct: 128 KSDLKDIREVPTAEGKALAEAQGLFFMETSARDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K ++ +N GK+++ K+ CC
Sbjct: 188 ELNKQDPASLSN---GKKVVIPSEAQGEAKKGGCC 219
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 130/175 (74%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + +T+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
H R V +E K + GL F+ETSA+ NVE AF ++ I++ K+L A
Sbjct: 128 KHLRAVPTDEAKAFSADNGLSFIETSALDGGNVEAAFQNILTDIYRIVSNKALEA 182
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DY+FK V+IGD AVGKS LLS FAR+EF LDSK TIGVEFA R+IR DK++KAQIWDTA
Sbjct: 11 DYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWDTA 70
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+ AITS+YYRGA GALLVYD+TR ATFE +WL+ELR+ S + I+LVGNK+DL
Sbjct: 71 GQERYLAITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKADL 130
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
H R V+ E+ K AE E ++FMETSA Q+ NV+ +F ++ I++ +KSL A
Sbjct: 131 RHLRAVSTEDAKAFAEKESIFFMETSA-QDTNVKTSFETLLTDIYRILSKKSLVA 184
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/165 (63%), Positives = 129/165 (78%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMI 170
KSDL H R V +E K AE L F+ETSA+ + NVE AF ++
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNIL 169
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 147/215 (68%), Gaps = 5/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI+++ T++N +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V E+ K A L F+ETSA+ + NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEDAKNFAAENHLSFIETSALDSTNVELAFQTILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D + G + + +TK + CC
Sbjct: 180 --DGGDQHQVSQPGSSQPLHITPTAENSTKDTKCC 212
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 133/182 (73%), Gaps = 2/182 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MGD+ D+LFK V+IGDS VGKSNLLSRF R+EF +DSK TIGVEFA R+I V K
Sbjct: 1 MGDA--TSYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKT 58
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI++ T+ N ++WL+ELR+ S + I
Sbjct: 59 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVI 118
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V EE + A L F+ETSAM NVE AF ++ I++ K
Sbjct: 119 MLVGNKSDLRHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSK 178
Query: 181 SL 182
+L
Sbjct: 179 AL 180
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 137/179 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLL RF R+EF ++SK TIGVEFA RNI + +K IKAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYDIT++++F+N +WL+ELRE S + I+LVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
K+DL H R V+ EE + A L F+ETSAM NVE+AF ++ +I + +SL A
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEA 182
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 142/211 (67%), Gaps = 7/211 (3%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI++ AT+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V EE K + L F+ETSA+ NVE AF ++ +++ KSL + +D
Sbjct: 128 KHLRAVPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYRIVSTKSL-EQSSDP 186
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + + ID TK SCC
Sbjct: 187 IRAPTSDTIP-----VAIDSSA-PTKNGSCC 211
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 150/215 (69%), Gaps = 4/215 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 8 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGALGA+LVYD+++ TF+N +WL+ELR+ + + I+LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRIMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H R V ++ AE EGL ++ETSA++ NVE+AF ++ I++ +K + +
Sbjct: 128 KTDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVAS- 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ + GK IN+ +++ CC
Sbjct: 187 --DEGGAGAAGGVKEGK-TINVAAGDANSEKKQCC 218
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 149/222 (67%), Gaps = 5/222 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG D +YLFK V+IGDSAVGKSNLLSRF+RDEF +SK TIGVEF + + + K
Sbjct: 1 MGKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKE 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQERFRA+TS+YYRGA GAL+VYDITR TFE+ K+WL+EL C + +A
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQ 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNK DL R V+ EEGK LAE EGL+FMETSA+ NV+ AF +I +I +K
Sbjct: 121 MLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCCYK 222
L + + N +L + N D ++ + SCC +
Sbjct: 181 LLNSDAYKAELSVNRVSL-----VNNQDGSESSWRNPSCCSR 217
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 137/184 (74%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
++F V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAG
Sbjct: 78 FVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 137
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL
Sbjct: 138 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 197
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
H R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + + +
Sbjct: 198 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDM 257
Query: 191 ATSN 194
+ SN
Sbjct: 258 SPSN 261
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 139/183 (75%), Gaps = 1/183 (0%)
Query: 1 MGDSYDEECD-YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
MGD + E + YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF +++ + K
Sbjct: 1 MGDESEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGK 60
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
+KAQIWDTAGQERFRA+TS+YYRGA GALLVYDI+RR+TF+N +WL+EL + +A
Sbjct: 61 DVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
+LVGNK DL + REV EEGK LAE EGL+FMETSA+ + NV AF +I +I+ +
Sbjct: 121 KMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSR 180
Query: 180 KSL 182
K L
Sbjct: 181 KIL 183
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/165 (63%), Positives = 130/165 (78%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMI 170
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 169
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 143/211 (67%), Gaps = 8/211 (3%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
D+LFK V+IGDS VGKSNLLSRF R+EF +DSK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + AT+++ +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V EE K + L F+ETSA+ NV+ AF ++ I++ KSL +
Sbjct: 128 KHLRAVPTEEAKAFSTENELSFIETSALDASNVDSAFQTILTGIYRIVSSKSLEQSADPI 187
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A ++ + I + + +A QS CC
Sbjct: 188 RAPTS--------DTIPVAIDSSAPSQSKCC 210
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 150/217 (69%), Gaps = 6/217 (2%)
Query: 6 DEEC--DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
DEE DYLFK V++GDS+VGKSNLL+RFAR+EF +SK TIGVEF + + + K IKA
Sbjct: 6 DEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKA 65
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL + +LV
Sbjct: 66 QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILV 125
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNK+DL H+REV+ EGK LAE++GL+FMETSA+ + NV +AF ++ +I+ +K
Sbjct: 126 GNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKVFQ 185
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ ++ S L GK ++ D + CC
Sbjct: 186 SQEQKRSEQS----LSNGKPVMLSDSNEPTSGGRWCC 218
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 154/219 (70%), Gaps = 5/219 (2%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
Y+++ DY+FK V+IGDSAVGK+ LL+RFA+++F +DSK TIGVEF + + + +K +KAQ
Sbjct: 94 YNQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQ 153
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F+N KWL ELR + ++L+G
Sbjct: 154 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIG 213
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK DL R V E+ + A+ E L+FMETSA+++ NVE AFL ++ +I++ +K+L A
Sbjct: 214 NKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTA 273
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATK---QSSCC 220
ND S + L G +II E+ A + + CC
Sbjct: 274 --NDDADPSGISGLLKGTKIIVPSQEINAGEKKGKGGCC 310
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 155/222 (69%), Gaps = 5/222 (2%)
Query: 2 GDSYDE---ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD 58
G SY E + DY+FK V+IGDSAVGKS LL+ FAR+EF LDSK TIGVEF R + +
Sbjct: 5 GGSYGEVGQKIDYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHIDA 64
Query: 59 KLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCM 118
+ +KAQ DTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR +
Sbjct: 65 RTVKAQTRDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNI 124
Query: 119 AIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
I+L+GNKSDL R V E+ K AE E L+FMETSA+++ N+E+AF+ ++ +I++
Sbjct: 125 VIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNLENAFMTVLTEIYRIVS 184
Query: 179 QKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K+L A N++ +S ++L G +I+ E ++SCC
Sbjct: 185 KKNLVA--NEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCC 224
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 134/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V +E K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL 179
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 147/218 (67%), Gaps = 9/218 (4%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D YD Y+ V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IK
Sbjct: 4 DEYD--VSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIK 61
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
+QIWDTAGQER+RAITS+YYRGA+GALLVYD+++ T+EN +WL+ELR+ S + I+L
Sbjct: 62 SQIWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIML 121
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V +E K A L F+ETSA+ NVE AF ++ +I + K+L
Sbjct: 122 VGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKAL 181
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ S+ N L G ++++ I + K+ CC
Sbjct: 182 ------ESGDSSANQL-GDRKVVEITKTPDSEKKPGCC 212
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 133/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL H R V EE K A L F+ETSA NVE AF ++ +I++ K+L
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKAL 179
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 142/213 (66%), Gaps = 10/213 (4%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF +++K TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAIT++YYRGA+GALLVYDI++ AT+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V EE K A GL F+ETSA+ NVE AF ++ I++ KSL +
Sbjct: 128 KHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSEDPI 187
Query: 190 TATSNCNNLGGGKEIINIDHEV--TATKQSSCC 220
TS + I + H V ++ CC
Sbjct: 188 KPTSG--------DTIQVSHSVDQNQSQGGKCC 212
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 140/185 (75%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA ++I+ K
Sbjct: 1 MGSRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI++ +TFEN ++WL+ELR+ + + +
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E +E L F+ETSA+ V+ +F +++ +I++ ++
Sbjct: 121 MLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTSFQRILTEIYRLMSRR 180
Query: 181 SLCAK 185
++ A+
Sbjct: 181 NMAAE 185
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 136/183 (74%)
Query: 12 LFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQ 71
L + V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQ
Sbjct: 53 LIEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 112
Query: 72 ERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTH 131
ER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H
Sbjct: 113 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 172
Query: 132 SREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTA 191
R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + + + +
Sbjct: 173 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMS 232
Query: 192 TSN 194
SN
Sbjct: 233 PSN 235
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 135/182 (74%)
Query: 13 FKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQE 72
F V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQE
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 60
Query: 73 RFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHS 132
R+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H
Sbjct: 61 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 120
Query: 133 REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTAT 192
R V +E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + + + +
Sbjct: 121 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSP 180
Query: 193 SN 194
SN
Sbjct: 181 SN 182
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 149/222 (67%), Gaps = 5/222 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG D +YLFK V+IGDSAVGKSNLLSRF+RDEF +SK TIGVEF + + + K
Sbjct: 1 MGKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKE 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQERFRA+TS+YYRGA GAL+VYDITR TFE+ K+WL+EL C + +A
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQ 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNK DL R V+ EEGK LAE EGL+FMETSA+ NV+ AF +I +I +K
Sbjct: 121 MLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCCYK 222
L + + N +L + N D ++ + SCC +
Sbjct: 181 LLNSDAYKAELSVNRVSL-----VNNQDGSESSWRNPSCCSR 217
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 145/214 (67%), Gaps = 6/214 (2%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + I + K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEINGKEIKAQIWDTA 71
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL + +LVGNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
+REV EGK LAE +GL+F+ETSA+ + NV +AF ++ +I+ +K + ++ K
Sbjct: 132 KDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMISQELKK 191
Query: 190 TATSNCNNLGGGKEIINI---DHEVTATKQSSCC 220
S N GK + I D K+ CC
Sbjct: 192 QDVSWMEN---GKTTVVIQGEDQVEGEPKKGGCC 222
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 131/173 (75%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R ++V K +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIWDTA 69
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI +++TF+N ++WL+ELR+ S + I+LVGNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNKSDL 129
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V + + AE L FMETSA+ NVE AF ++ I++ K+L
Sbjct: 130 KHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKAL 182
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 136/183 (74%), Gaps = 1/183 (0%)
Query: 1 MGDSYDEECD-YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
MGD D E + YLFK V+IGDSAVGKSNLLSR+AR+EF SK TIGVEF +++ + K
Sbjct: 1 MGDEPDGEAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGK 60
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
+KAQIWDTAGQERFRA+TS+YYRGA GALLVYDITRR+TF+N +WL+EL + +A
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
+LVGNK DL R+V EEGK LAE EGL+FMETSA+ NV AF +I +I+ +
Sbjct: 121 KMLVGNKCDLGDIRQVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSR 180
Query: 180 KSL 182
K L
Sbjct: 181 KVL 183
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 149/220 (67%), Gaps = 9/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA ++I+ K
Sbjct: 1 MASRVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI++ TFEN ++WL+ELR+ + + +
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E +E L F+ETSA+ V+ AF +++ +I++ ++
Sbjct: 121 MLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRR 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ A+ N +N G K I + K+ CC
Sbjct: 181 NMQAEEN-----ANAPMSAGHK----ISLSQSGDKKKGCC 211
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 145/211 (68%), Gaps = 3/211 (1%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + I + K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVINGKEIKAQIWDTA 71
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GALLVYDI+R TF++ +WL EL + +LVGNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
REV EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K + ++ +K
Sbjct: 132 KDIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMTSQELNK 191
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ +N GK+++ + T CC
Sbjct: 192 QDPASLSN---GKKVVIPSEGESKTGGGGCC 219
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/226 (49%), Positives = 159/226 (70%), Gaps = 16/226 (7%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD Y+++ DY+FK V+IGDSAVGK+ LL+RFAR+EF LDSK TIGVEF + + + +K+I
Sbjct: 6 GD-YNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKII 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ KWL ELR + I+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK DL R V E+ + LA+ E L+FMETSA+++ NVE FL ++ +I++ +KS
Sbjct: 125 LIGNKCDLGSLRAVPMEDAEELAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKS 184
Query: 182 LCAKMNDKTATSNCNNLGG-----GKEIINIDHEV-TATKQSSCCY 221
L T++ +++GG G II + E+ K+ CC+
Sbjct: 185 L---------TTSDDDIGGSGLLKGSRIIVPNQEIYNGGKKGGCCF 221
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 128/173 (73%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + AT+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V +E K A L F+ETSA+ NVE AF ++ I++ KSL
Sbjct: 128 KHLRAVPTDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYRIVSSKSL 180
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 144/213 (67%), Gaps = 5/213 (2%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + I + K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQIWDTA 71
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR TF++ +WL EL + +LVGNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
+REV EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K + ++ K
Sbjct: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSQELTK 191
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQS--SCC 220
N GK ++ + A QS CC
Sbjct: 192 HEVPRIEN---GKSVVIQGENLEADGQSKKGCC 221
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 129/167 (77%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWD
Sbjct: 1 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 60
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAG ER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I LVGNKS
Sbjct: 61 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKS 120
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
DL H R V +E + AE GL F+ETSA+ + NVE AF ++ +I+
Sbjct: 121 DLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 139/183 (75%), Gaps = 1/183 (0%)
Query: 1 MGDSYDEECD-YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
MGD + E + YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF +++ + K
Sbjct: 1 MGDESEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGK 60
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
+KAQIWDTAGQERFRA+TS+YYRGA GALLVYDI+RR+TF+N +WL+EL + +A
Sbjct: 61 DVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
+LVGNK DL + REV EEGK LAE EGL+FMETSA+ + NV AF +I +I+ +
Sbjct: 121 KMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSR 180
Query: 180 KSL 182
K L
Sbjct: 181 KIL 183
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 138/177 (77%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DY+FK V+IGDSAVGKS LL+RF+R+EF L+SK TIGVEF R + V K IKAQI
Sbjct: 8 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYDIT+R TFE+ +WL EL+ + + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL + R V+ EE K LAE E L+FMETSA++ NV+ AF ++ +I++ +KSL
Sbjct: 128 KSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSL 184
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 145/209 (69%), Gaps = 7/209 (3%)
Query: 13 FKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQE 72
F+ V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQE
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 73 RFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHS 132
R+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGNKSDL H
Sbjct: 65 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 124
Query: 133 REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTAT 192
R V +E K AE L F+ETSA+ + NVE AF ++ +I++ QK + +D +
Sbjct: 125 RAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDSPDDDNSP 184
Query: 193 SNCNNLGGGKEIINI-DHEVTATKQSSCC 220
SN + I++ + A +Q CC
Sbjct: 185 SN------NVQTIHVAPTDNAAPRQQKCC 207
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 138/177 (77%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DY+FK V+IGDSAVGKS LL+RF+R+EF L+SK TIGVEF R + V K IKAQI
Sbjct: 8 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYDIT+R TFE+ +WL EL+ + + ++LVGN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL + R V+ EE K LAE E L+FMETSA++ NV+ AF ++ +I++ +KSL
Sbjct: 128 KSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSL 184
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 142/214 (66%), Gaps = 11/214 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS GKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 226 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 285
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + T+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 286 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 345
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V +E K A L F+ETSA+ NVE AF ++ +I++ K+L + +D
Sbjct: 346 RHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSS-DDV 404
Query: 190 TATSNCNNLGGGKEIINIDHEVT---ATKQSSCC 220
S G E I + ATK++ CC
Sbjct: 405 IKPS-------GGETITVQPSADDGGATKKNGCC 431
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 156/217 (71%), Gaps = 3/217 (1%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
+++++ DY+FK V+IGDSAVGKS LL+RF+R+EF ++SK TIGVEF R + + K IKA
Sbjct: 7 NFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKA 66
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR + I+L+
Sbjct: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLI 126
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNK+DL R V E+ K A+ E L+FMETSA+ + NVE +FL ++ +I++ +K+L
Sbjct: 127 GNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLV 186
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A N++ + ++L G +I+ + E T +K CC
Sbjct: 187 A--NEEGESGGDSSLLQGTKIV-VAGEETESKGKGCC 220
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 156/217 (71%), Gaps = 3/217 (1%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
+++++ DY+FK V+IGDSAVGKS LL+RF+R+EF ++SK TIGVEF R + + K IKA
Sbjct: 7 NFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKTIKA 66
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR + I+L+
Sbjct: 67 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLI 126
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNK+DL R V E+ K A+ E L+FMETSA+ + NVE +FL ++ +I++ +K+L
Sbjct: 127 GNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLV 186
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A N++ + ++L G +I+ + E T +K CC
Sbjct: 187 A--NEEGESGGDSSLLQGTKIV-VAGEETESKGKGCC 220
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/204 (54%), Positives = 142/204 (69%), Gaps = 8/204 (3%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E D+LFK V+IGDS VGKSNLLSRF R+EF +DSK TIGVEFA R+I+V K IKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGNK
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC--- 183
SDL H R V +E K A L F+ETSA+ NVE AF ++ +I++ K L
Sbjct: 124 SDLRHLRAVTTDEAKAFAAENHLSFIETSALDASNVELAFQNILTEIYRIVSSKVLPENE 183
Query: 184 --AKMNDK---TATSNCNNLGGGK 202
+ D+ + N+ GGGK
Sbjct: 184 HGGSIPDRGIPLSDQPKNDQGGGK 207
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 149/215 (69%), Gaps = 6/215 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R + V K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++ + VLVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQHCCVLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL H V+ E+GK AE E LYFMETSA++ NVE++F +++ QI++ +K++
Sbjct: 127 KADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILSKKAVEGA 186
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N + + E I++ ++V+A K+ CC
Sbjct: 187 ENGNAS------VPAKGEKIDLKNDVSALKRVGCC 215
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 133/170 (78%), Gaps = 1/170 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQ 64
DE DYL+K V+IGDS VGKSN+LSRF RDEF L+SK TIGVEFA +++ + + K+IKAQ
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 64
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RAITS+YYRGA+GALLVYDIT+R +FEN ++WL+ELR+ + I+LVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVG 124
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
NKSDL H R V+ EE A E L F+ETSA+ NVE AF Q++ +I+
Sbjct: 125 NKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIY 174
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 133/178 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V +K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
KSDL H R V ++ K A L F+ETSA+ NVE AF ++ +I+ KS
Sbjct: 123 KSDLRHLRAVPTDDAKNFAAENHLSFIETSALDATNVELAFQNILTEIYNIVSTKSFA 180
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 153/221 (69%), Gaps = 10/221 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA ++I+ K
Sbjct: 1 MATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI++ TFEN ++WL+ELR+ + + +
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E +E L F+ETSA+ V+ AF +++ +I++ ++
Sbjct: 121 MLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRR 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
++ A+ +N L G+ I +N +++ + +CC
Sbjct: 181 NMAAEDG-----ANAPQLSSGQTISLNAENK----PRRNCC 212
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 145/215 (67%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD T+ TF N ++WL+ELRE + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K D H R + ++G AE L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KIDQKHVRAIKTDQGAEFAEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ S N L G ++++ I A + CC
Sbjct: 180 ---ENGNSGQNPL-GDRKVVEITKSQDADAKQKCC 210
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 129/173 (74%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + AT+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V +E K + GL F+ETSA+ NVE AF ++ I++ K+L
Sbjct: 128 KHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKAL 180
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 145/211 (68%), Gaps = 6/211 (2%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF D+K TIGVEFA R+I V K++KAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAIT++YYRGA+GALLVYDI++R ++EN ++WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V +E + A GL F+ETSA+ NV+ AF + I++ ++L + N
Sbjct: 128 KHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTLESSANPI 187
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A S N + G + + A + + CC
Sbjct: 188 EAPSG-NTVSVGPSL-----DSNAKQSNGCC 212
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 145/214 (67%), Gaps = 5/214 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + + +KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIW 65
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGALLVYDITRR +F++ +WL ELR + I+LVGNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNK 125
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V+ E+ K AE E L+F+ETSA+Q NVE AF ++ +I + +K++ ++
Sbjct: 126 SDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVSEP 185
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A + G K + + +S CC
Sbjct: 186 KSNGA---APAMPGTK--VLVPGPAQEIPKSKCC 214
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 148/228 (64%), Gaps = 15/228 (6%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D ++ DYLFK V++GDS VGKSNLLSRF R+ F LDSK TIGVEFA R I+V K IK
Sbjct: 10 DQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIK 69
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSS-CMAIV 121
AQIWDTAGQER+RAITS+YYRGA GALLVYD+TR TFE+ +WLRELR+ A++
Sbjct: 70 AQIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVM 129
Query: 122 LVGNKSDLT---------HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQ 172
LVGNK+DL H R V + LAE EGL F+ETSA+ NV+ AF ++ +
Sbjct: 130 LVGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTE 189
Query: 173 IHQTTIQKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
I++ +K+L A +A + +G G + I + +A + CC
Sbjct: 190 IYRAVSRKALAA----SSAGDDAGAVGEG-QAIQVSASDSAGLTTRCC 232
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 136/189 (71%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA +++ + + IKAQI
Sbjct: 10 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAIT++YYRGA+GALLVYDIT+R TF N + WL ELR M ++LVGN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDMVVMLVGN 129
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL H R V E+ K+ AE GL+FMETSA+++ VE+AF ++ I + +
Sbjct: 130 KCDLRHLRTVQTEDAKLWAERHGLFFMETSALESTGVENAFYYILKTIFEAVRSHPPVSN 189
Query: 186 MNDKTATSN 194
++ K + N
Sbjct: 190 VDMKMSPYN 198
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 156/220 (70%), Gaps = 12/220 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQ 64
DE DYL+K V+IGDS VGKSN+LSRF RDEF L+SK TIGVEFA +++ + + K+IKAQ
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 64
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RAITS+YYRGA+GALLVYDIT+R +FEN ++WL+ELR+ + I+LVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVG 124
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NKSDL H R V+ EE A E L F+ETSA+ NVE AF Q++ +I+ +K +
Sbjct: 125 NKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQI-- 182
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATK----QSSCC 220
+ N ++ T G G++ I++D E T ++ + CC
Sbjct: 183 EDNPQSTTQP----GRGQK-IHLDEERTDSQIRQSRRGCC 217
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 147/216 (68%), Gaps = 2/216 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGK+ +LSRFA++EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 22 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIW 81
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDIT+R +F++ +W+ ELR S + I+L+GNK
Sbjct: 82 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNK 141
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL R V E+ AE +GL+F ETSA+ NVE AFL+++ +I+ + K +
Sbjct: 142 GDLVDQRVVLSEDAVEFAEEQGLFFSETSALTGENVESAFLKLLQEINTRVVSKRSLSDC 201
Query: 187 NDKTATSNCNNLGGGK--EIINIDHEVTATKQSSCC 220
N T+ N+L G K I + E+T K+ C
Sbjct: 202 NHGKKTNGGNSLKGSKIDVISGPELEITEVKKVPSC 237
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 142/178 (79%), Gaps = 1/178 (0%)
Query: 6 DEECD-YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
DEE + YLFK V+IGDSAVGKSNLLSR+AR+EF ++SK TIGVEF +++ + K +KAQ
Sbjct: 3 DEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQ 62
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQERFRA+TS+YYRGA+GAL+VYDI+RR+TF++ +WL EL+ + +A +LVG
Sbjct: 63 IWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVG 122
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
NKSDL + R+V+ EEGK LAE EGL+F+ETSA+ + NV+ AF +I +I+ +K L
Sbjct: 123 NKSDLENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVL 180
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGK+ +LSRFA++EF +SK TIGVEF R++ + K+IKAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIW 78
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDIT+R +F++ +W+ ELR S + I+L+GNK
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNK 138
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL R V+ E+ AE +GL+F ETSA+ NVE +F +++ +IH+ ++SL
Sbjct: 139 GDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDN 198
Query: 187 NDKTATSNCNNLGGGK--EIINIDHEVTATKQSSCC 220
A +N L G K I + E+ K+SS C
Sbjct: 199 GKANADNNVATLKGSKIDVISGAELEIAEMKKSSSC 234
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 134/179 (74%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 175 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 234
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 235 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 294
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSN 194
+E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + + + + SN
Sbjct: 295 PTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 353
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 141/181 (77%), Gaps = 2/181 (1%)
Query: 4 SYDEEC--DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
S DEE +YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF +++ + K +
Sbjct: 2 SSDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRA+TS+YYRGA+GAL+VYDI+RR TF++ +WL EL+ + +A++
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMM 121
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNK DL + R+V+ EEGK LAE EGL+FMETSA+ + NV+ AF +I +I+ +K
Sbjct: 122 LVGNKCDLENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181
Query: 182 L 182
L
Sbjct: 182 L 182
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 134/179 (74%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 57 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 116
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 117 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 176
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSN 194
+E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + + + + SN
Sbjct: 177 PTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 235
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 134/180 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D E DYLFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA ++I K IKAQI
Sbjct: 5 DNEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+T+ ATFEN ++WL+ELR+ + + ++LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL R V EE +AE L F+ETSA+ V+ AF ++ +I++ +K L ++
Sbjct: 125 KSDLKPQRAVPTEEAMAMAEQHNLAFIETSALDASGVDIAFQNILTEIYRLMNKKQLASE 184
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 146/214 (68%), Gaps = 5/214 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + + +KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIW 65
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGALLVYDITRR +F++ +WL ELR + I+LVGNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNK 125
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V+ E+ K AE E L+F+ETSA+Q NVE AF ++ +I + +K++ +
Sbjct: 126 SDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNM---V 182
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ + + G K + + +S CC
Sbjct: 183 SEPKSNGVAPAMAGTK--VLVPGPAQEIPKSKCC 214
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 142/186 (76%), Gaps = 2/186 (1%)
Query: 4 SYDEEC--DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
S DEE +YLFK V+IGDSAVGKSNLLSR+AR+EF SK TIGVEF +++ + K +
Sbjct: 2 SSDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDV 61
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRA+TS+YYRGA+GAL+VYDI+RR+TFE+ +WL EL+ + +A +
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARM 121
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNK DL + R V+ EEGK LAET+GL+FMETSA+ + NV+ AF +I I+ +K
Sbjct: 122 LVGNKCDLDNMRAVSVEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRKQ 181
Query: 182 LCAKMN 187
L + M+
Sbjct: 182 LNSDMH 187
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 137/179 (76%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S ++E DYLFK V+IGDS VGKSNLL RF R+EF ++SK TIGVEFA RNI + +K IKA
Sbjct: 2 SQEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKA 61
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GAL+VYDIT++++F+N +WL+ELR+ S + I+LV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLV 121
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
GNK+DL H R V+ EE + A L F+ETSAM NVE+AF ++ +I + +++
Sbjct: 122 GNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAM 180
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 155/226 (68%), Gaps = 15/226 (6%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF + + + K
Sbjct: 1 MGEEGEE---YLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKE 57
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQERFRA+TS+YYRGA GALLVYDI+RR+TFE+ +WL EL+ C + +A
Sbjct: 58 VKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVAR 117
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNK DL + R+V+ EEGK LAE EGL+FMETSA+ NV+ AF +I +I +K
Sbjct: 118 MLVGNKCDLENIRDVSTEEGKNLAEAEGLFFMETSALDATNVKTAFEMVIREIFNNVSRK 177
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQ----SSCCYK 222
L + + N +L +++ A+KQ SSCC +
Sbjct: 178 VLHSDSYKAELSVNRVSL--------VNNGAAASKQNQIYSSCCSR 215
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 139/209 (66%), Gaps = 8/209 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF RD F L+SK TIGVEFA RN+ + K+IKAQI
Sbjct: 10 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+ + +F N WL ELR+ + ++LVGN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 129
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ--------TT 177
K DL H R V E+ + A+ +GL F+ETSA+ + NVE+AF Q++ I+
Sbjct: 130 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVNN 189
Query: 178 IQKSLCAKMNDKTATSNCNNLGGGKEIIN 206
I + N + N +N GG+ N
Sbjct: 190 IDMKMSLHNNQPIVSPNADNASGGRRCCN 218
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 148/216 (68%), Gaps = 2/216 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGK+ +LSRFA++EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIW 78
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDI++R +F++ +W+ ELR S + I+L+GNK
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLIGNK 138
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL R V+ E+ AE +GL+F ETSA+ NVE AF +++ +IH+ ++SL
Sbjct: 139 GDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESAFFKLLEEIHRVISKRSLECGN 198
Query: 187 NDKTATSNCNNLGGGK--EIINIDHEVTATKQSSCC 220
A +N L G K I + E+T K+ S C
Sbjct: 199 GKANADNNLATLKGSKIDVISGAELEITDMKKLSSC 234
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 141/214 (65%), Gaps = 11/214 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS GKSNLLSRF R+EF LDS+ TIGVEFA R+I V K IKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + +T+ N +WL+ELR+ S + ++LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V EE K A L F+ETSA+ NVE AF ++ +I+ K+L + +D
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSS-DDV 186
Query: 190 TATSNCNNLGGGKEIINIDHEVT---ATKQSSCC 220
S G E I++ TK+ CC
Sbjct: 187 IKPS-------GGETISVQPSTDDGGQTKKGGCC 213
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 134/173 (77%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF SK TIGVEF +N+ + K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR+TFE+ +WL EL+ + +A +LVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R V+ EEGK LAETEGL+FMETSA+ + NV+ AF +I I+ +K L
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQL 182
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 150/224 (66%), Gaps = 11/224 (4%)
Query: 5 YDEEC---DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
Y+EE DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + + + K +
Sbjct: 4 YNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL + +
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL +R+V EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K
Sbjct: 124 LVGNKSDLKDARKVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKV 183
Query: 182 LCAKMNDKTATSNCNNLGGGKEII-----NIDHEVTATKQSSCC 220
+ ++ +K + N GK ++ D E A + CC
Sbjct: 184 MMSQELNKQDVTRIEN---GKTVVLQGEGEGDGEADAQSKKRCC 224
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 134/173 (77%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF SK TIGVEF +N+ + K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR+TFE+ +WL EL+ + +A +LVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R V+ EEGK LAETEGL+FMETSA+ + NV+ AF +I I+ +K L
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 127/173 (73%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L++K TIGVEFA R I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAIT++YYRGA+GALLVYDI + AT+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V EE K + GL F+ETSA+ NVE AF ++ I + KSL
Sbjct: 128 KHLRAVPTEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFRIVSNKSL 180
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 128/173 (73%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + AT+EN +WL+ELR+ + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V +E K + L F+ETSA+ NVE AF ++ I++ K+L
Sbjct: 128 KHLRAVPTDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYRIVSSKAL 180
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 137/181 (75%), Gaps = 1/181 (0%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GDS ++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + K +
Sbjct: 8 GDS-SQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYDIT+R +F++ +WL ELR + I+
Sbjct: 67 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVII 126
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK+DL R V E+ K AE EGL+F+ETSA++ NVE+AFL ++ +I +K+
Sbjct: 127 LIGNKTDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKN 186
Query: 182 L 182
L
Sbjct: 187 L 187
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 151/220 (68%), Gaps = 6/220 (2%)
Query: 5 YDEEC---DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
Y+EE DYLFK V+IGDSAVGKSNLL+RFARDEF +SK TIGVEF + + + K +
Sbjct: 4 YNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEV 63
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL + +
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTI 123
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL +REV EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K
Sbjct: 124 LVGNKSDLKDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKV 183
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATK-QSSCC 220
+ ++ +K + N G ++ + +V A + + CC
Sbjct: 184 MISQELNKQDVTRIEN--GKTVVLQGEGDVEAAQSKKGCC 221
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 150/220 (68%), Gaps = 14/220 (6%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVILLVGN 124
Query: 126 KSDLTHSREVNE-EEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
KSDL H R V E + AE L F+ETSA+ + NVE+AF ++ +I++ QK +
Sbjct: 125 KSDLRHLRAVCPLTEARAFAERH-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA- 182
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
D+ A ++ G +++I T Q CC
Sbjct: 183 ---DRAA----HDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 152/222 (68%), Gaps = 8/222 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D + +YLFK V+IGDSAVGKSNLL+R+AR+EF +SK TIGVEF +++ + K
Sbjct: 1 MSDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKE 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQERFRA+TS+YYRGA+GAL+VYDITR +TFEN +WL EL + +A
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAK 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK DL R V+ EEGK LAE+EGL+FMETSA+ + NV+ AF +I +I+ +K
Sbjct: 121 MLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCCYK 222
L + + T N +L + +E TK SCC +
Sbjct: 181 QLNSDSYKEELTVNRVSL--------VKNENEGTKTFSCCSR 214
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 145/204 (71%), Gaps = 3/204 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G ++ DYLFK V++GDS+VGKSNLL+RFAR+EF +SK TIGVEF + + + K I
Sbjct: 4 GGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKEI 63
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRA+TS+YYRGA+GALLVYDITRR TF++ +WL EL + +
Sbjct: 64 KAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSDMNVVTI 123
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK+DL H+REV+ EGK LAE +GL+FMETSA+ + NV+ AF ++ +I+ +K
Sbjct: 124 LIGNKTDLKHAREVSTAEGKALAEAQGLFFMETSALDSSNVKAAFQTVVKEIYSILSRKV 183
Query: 182 LCAKMNDKTATSNCNNLGGGKEII 205
+ + S+ +L GK ++
Sbjct: 184 FQCQEQKR---SDLQSLSNGKAVV 204
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 5/214 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGKS +L+RFAR+EF LDSK TIGVEF R + + + +KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIW 65
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGALLVYDITRR +F++ +WL ELR + I+LVGNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNK 125
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V+ E+ K AE E L+F+ETSA+Q NVE +F ++ +I + +K++ ++
Sbjct: 126 SDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSKKNMVSEP 185
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
A + G K + + +S CC
Sbjct: 186 KSNGA---APAMPGTK--VLVPGPAQEIPKSKCC 214
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 139/209 (66%), Gaps = 8/209 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDS VGKSNLLSRF RD F L+SK TIGVEFA RN+ + K+IKAQI
Sbjct: 10 EEEYDYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+ +F N + WL+EL + + ++LVGN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNIVVMLVGN 129
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTT-------- 177
K DL H R V E+ + A+ +GL F+ETSA+ + NVE+AF Q++ I+
Sbjct: 130 KCDLRHLRSVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQNIYSIVSSHPPVNN 189
Query: 178 IQKSLCAKMNDKTATSNCNNLGGGKEIIN 206
I + N + N +N GG+ N
Sbjct: 190 IDMKMSLHNNQPIVSPNADNASGGRRCCN 218
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 134/179 (74%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 16 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 75
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 76 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 135
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSN 194
+E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + + + + SN
Sbjct: 136 PTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 194
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 139/209 (66%), Gaps = 8/209 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF RD F L+SK TIGVEFA RN+ + K+IKAQI
Sbjct: 10 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+ + +F N WL ELR+ + ++LVGN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 129
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ--------TT 177
K DL H R V E+ + A+ +GL F+ETSA+ + NVE+AF Q++ I+
Sbjct: 130 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYNIVSSHPPVNN 189
Query: 178 IQKSLCAKMNDKTATSNCNNLGGGKEIIN 206
+ + N + N +N GG+ N
Sbjct: 190 VDMKMSLHNNQPIVSPNADNASGGRRCCN 218
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 136/173 (78%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF + SK TIGVEF + + + K +KAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR TF++ +WL EL+ C + +A++LVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+ R V+ +EGK LAE EGL+FMETSA+ + NV+ AF +I +I+ +K L
Sbjct: 131 ENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKVL 183
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 134/179 (74%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 62 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSN 194
+E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + + + + SN
Sbjct: 122 PTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 180
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 134/179 (74%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 4 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 63
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 64 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 123
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSN 194
+E + AE GL F+ETSA+ + NVE AF ++ +I++ QK + + + + SN
Sbjct: 124 PTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 182
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 134/173 (77%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF +SK TIGVEF + + + K +KAQIWDTA
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR TF+N +WL EL+ S + +LVGNKSDL
Sbjct: 68 GQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H REV E+G+ LAE+EGL+F+ETSA+ N NV AF ++ +I+ +K L
Sbjct: 128 EHIREVPVEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKML 180
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 154/221 (69%), Gaps = 6/221 (2%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD Y ++ DY+FK V+IGDSAVGK+ LL+RFAR+EF LDSK TIGVEF + + + +K I
Sbjct: 6 GD-YHQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKTI 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ +WL ELR + I+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK DL R V E+ + +A+ E L+FMETSA+++ NVE FL ++ +I++ +KS
Sbjct: 125 LIGNKCDLGSLRAVPMEDAEEVAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKS 184
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEV-TATKQSSCCY 221
L A +D + L G II + E+ K+ CC+
Sbjct: 185 LTASDDDNWGSG----LLKGSRIIVPNQEIDNGGKKGGCCF 221
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 146/220 (66%), Gaps = 6/220 (2%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M ++E D+LFK V+IGDS VGK+NLLSRF ++EF +DSKPTIGVEFA + + +K
Sbjct: 1 MASKNEDEYDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKY 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQE++RAIT++YYRGA+GAL +YDIT++ TF+N KKWL ELRE+ + +
Sbjct: 61 IKAQIWDTAGQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIIC 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK DL R+V E+ AE L FMETSA Q +NV+ AF ++I +I+
Sbjct: 121 MLIGNKCDLQEMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYN----- 175
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+L + N++ + G I + A K+ CC
Sbjct: 176 NLKTRPNEEKKKAQPQQ-NGNNIIKDFKQPTQAEKEKKCC 214
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYXXXXPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 -MNDKTATSNC 195
+D++ +N
Sbjct: 185 AAHDESPGNNV 195
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 149/213 (69%), Gaps = 8/213 (3%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLL+R+AR+EF +SK TIGVEF +++ + K +KAQIWDTA
Sbjct: 9 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVKAQIWDTA 68
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDITR +TFEN +WL EL + +A +L+GNK DL
Sbjct: 69 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 128
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
R V+ EEGK LAE+EGL+FMETSA+ + NV+ AF +I +I+ +K L + +
Sbjct: 129 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKE 188
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCCYK 222
T N +L + +E TK SCC +
Sbjct: 189 ELTVNRVSL--------VKNENEGTKTFSCCSR 213
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 141/214 (65%), Gaps = 11/214 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS GKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + T+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L + +D
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSS-DDV 186
Query: 190 TATSNCNNLGGGKEIINIDHEVT---ATKQSSCC 220
S G E I + TK++ CC
Sbjct: 187 IKPS-------GGETITVQPSADDGGQTKKNGCC 213
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 142/178 (79%), Gaps = 1/178 (0%)
Query: 6 DEECD-YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
DEE + YLFK V+IGDSAVGKSNLLSR+AR+EF ++SK TIGVEF +++ + K +KAQ
Sbjct: 90 DEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQ 149
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQERFRA+TS+YYRGA+GAL+VYDI+RR+TF++ +WL EL+ + +A +LVG
Sbjct: 150 IWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVG 209
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
NKSDL + R+V+ EEGK LAE EGL+F+ETSA+ + NV+ AF +I +I+ +K L
Sbjct: 210 NKSDLENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVL 267
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 153/221 (69%), Gaps = 5/221 (2%)
Query: 5 YD--EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
YD E+ DY+FK V+IGDSAVGK+ +LSRFA++EF DSK TIGVEF R + + K+IK
Sbjct: 23 YDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIK 82
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RA+TS+YYRGALGA+LVYDIT+R +F++ +W+ ELR S + I+L
Sbjct: 83 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIML 142
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNK+DL R V E+ AE +GL+F ETSA+ NVE AFL+++ +I++ +K+L
Sbjct: 143 VGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKAL 202
Query: 183 -CAKMNDKTATSNCNNLGGGKE--IINIDHEVTATKQSSCC 220
C + + +L G K I+ + E++ K+ S C
Sbjct: 203 ECGYGKENGDNNVVASLNGTKVDIILGPELEISEMKKLSSC 243
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 157/220 (71%), Gaps = 4/220 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD Y+++ DY+FK V+IGDSAVGK+ LL+RF+R++F +DSK TIGVEF + + + +K +
Sbjct: 6 GD-YNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ +WL ELR + + I+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK DL + V E+ + A+ E L+FMETSA+++ NVE AFL ++ +I++ +K+
Sbjct: 125 LIGNKCDLGTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKT 184
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTA-TKQSSCC 220
L A ND+ + L G II + + +A K+ CC
Sbjct: 185 LTA--NDEADPGGGSGLLKGTRIIVPNQDASAYEKKGGCC 222
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 136/179 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA ++I+ K IKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ TFEN ++WL+ELR+ + + ++L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
KSDL H R V EE A+ L F+ETSA+ V+ AF +++ +I++ +K++ A
Sbjct: 125 KSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAA 183
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 149/221 (67%), Gaps = 4/221 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF ++F L+SK TIGVEFA R I V +K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++++++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL+H R V EE K A+ L F ETSA+ + NV+ AF ++I I+Q I K
Sbjct: 124 IGNKSDLSHLRAVPTEEAKNFAQENQLLFTETSALNSENVDQAFRELITSIYQ-MISKHQ 182
Query: 183 CAKMNDKTATSN--CNNLGGGK-EIINIDHEVTATKQSSCC 220
+D + N NN+ G + +E T + ++CC
Sbjct: 183 VDLGSDNNGSGNGASNNIKGPTISLTPTPNEKTKSSSNNCC 223
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 134/182 (73%), Gaps = 2/182 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MGD+ D+LFK V+IGDS VGKSNLLSRF R+EF ++SK TIGVEFA R+I V K
Sbjct: 1 MGDA--TSYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKT 58
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI+++ ++ + ++WL+ELR+ S + I
Sbjct: 59 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVI 118
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V EE K A L F+ETSAM NVE AF ++ I++ K
Sbjct: 119 MLVGNKSDLRHLRAVPTEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSK 178
Query: 181 SL 182
+L
Sbjct: 179 AL 180
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 147/215 (68%), Gaps = 7/215 (3%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD T++ TF N ++WL+ELRE + I+LVGN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K D H R+V + A+ L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 KIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +S+ N L G +++I I A + CC
Sbjct: 180 ---ENGSSSQNPL-GDRKVIEISKTQDADAKQKCC 210
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 140/189 (74%), Gaps = 1/189 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DY+FK V+IGDS VGKSNLLSRF +DEF D K TIGVEFA R+I +KLIKAQI
Sbjct: 5 DQDHDYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+ AITS+YYRGA+GALL+YDIT+ ++F N +KWL E+R+ + ++LVGN
Sbjct: 65 WDTAGQERYVAITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R+V +E+ AE + F+ETSA+ NVE F ++I +I+Q ++S+ +
Sbjct: 125 KSDLKHLRQVRQEDATAFAEKNNIAFIETSALDASNVELTFQRIITEIYQLLNKRSMVPE 184
Query: 186 MNDKTATSN 194
N+++ SN
Sbjct: 185 -NNESQVSN 192
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 141/211 (66%), Gaps = 6/211 (2%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R++ + K +KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI++ T+ N +WL+ELR+ + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V +E K + GL F+ETSA+ NVE AF ++ I++ KSL + D
Sbjct: 128 KHLRAVPTDEAKAFSSENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL-EQSADP 186
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
S +N+ ++ + A S CC
Sbjct: 187 IKPSTGDNI-----LVTPSVDPQAQSGSKCC 212
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 146/216 (67%), Gaps = 2/216 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGK+ +LSRFA++EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 22 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIW 81
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDIT+R +F++ +W+ ELR S + I+L+GNK
Sbjct: 82 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNK 141
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
D R V E+ AE +GL+F ETSA+ NVE AFL+++ +I+ + K +
Sbjct: 142 GDFVDQRVVLSEDAVEFAEEQGLFFSETSALTGGNVESAFLKLLQEINTRVVSKRSLSDC 201
Query: 187 NDKTATSNCNNLGGGK--EIINIDHEVTATKQSSCC 220
N T+ N+L G K I + E+T K+ C
Sbjct: 202 NHGKKTNGGNSLKGSKIDVISGPELEITEVKKVPSC 237
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS+VGKSNLL+RFAR+EF +SK TIGVEF + + + K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL + +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNVVTILVGNKTDL 131
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H+REV+ EG+ LAE +GL+FMETSA+ + NV AF ++ +I+ +K + K
Sbjct: 132 KHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQSLEQKK 191
Query: 190 TATSNCNNLGGGKEII 205
S +L GK ++
Sbjct: 192 ---SELQSLSSGKAVV 204
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 138/195 (70%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M EE DYL+K V+IGDS VGKSNLLSRF R+EF L++K TIGVEFA R I+ K
Sbjct: 1 MSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQ+WDTAGQER+RAITS+YYRGA+GALLVYDI ++AT+++ ++WL ELRE + I
Sbjct: 61 IKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H REV+ +E K +E L F+ETSA+ + NVE AF ++ QI+ +
Sbjct: 121 MLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHLMSRP 180
Query: 181 SLCAKMNDKTATSNC 195
S ++D+
Sbjct: 181 SHGPIISDEPPAPGV 195
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 136/173 (78%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF + SK TIGVEF + + + K +KAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR TF++ +WL EL+ C + +A++LVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+ R V+ +EGK LAE EGL+FMETSA+ + NV+ AF +I +I+ +K L
Sbjct: 131 ENIRAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNNVSRKVL 183
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 135/173 (78%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSRFAR+EF +SK TIGVEF + + + K IKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEIKAQIWDTA 69
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR TF++ K+WL+EL S +A +LVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVARMLVGNKCDL 129
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+ REV+ EEGK LAE EGL+FMETSA+ NV+ AF +I +I+ +K L
Sbjct: 130 ENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVL 182
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 140/191 (73%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK V+IGDSAVGKSNLLSRFAR+EF +SK TIGVEF + + + K IKAQIWDTAG
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAG 73
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QERFRA+TS+YYRGA+GAL+VYDITRR +F++ K+WL EL C + +A +LVGNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVGNKCDLD 133
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
REV+ +EGK LAE E L+FMETSA+ + NVE AF +I +I+ +K L +
Sbjct: 134 SIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKILNSDSYKAE 193
Query: 191 ATSNCNNLGGG 201
T+N +L G
Sbjct: 194 LTANRVSLVNG 204
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 133/172 (77%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK V+IGDSAVGKSNLLSRFAR+EF +SK TIGVEF + + + K +KAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAG 71
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QERFRA+TS+YYRGA GAL+VYDI+RR TFE+ K+WL EL S +A +LVGNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+ REV+ EEGK LAE EGL+FMETSA+ + NV+ AF +I +I+ +K L
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVL 183
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 148/224 (66%), Gaps = 14/224 (6%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M ++ D +YLFK V+IGDSAVGKSNLLSRFAR+EF +SK TIGVEF + + + K
Sbjct: 1 MDENGDGAEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKE 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQERFRA+TS+YYRGA GAL+VYDI+RR TF++ K+WL EL S +A
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVAR 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNK DL REV+ EEGK AE EGL+FMETSA+ + NV+ AF +I +I+ +K
Sbjct: 121 MLVGNKCDLESLREVSTEEGKAFAEEEGLFFMETSALDSTNVQKAFEIVIREIYNNISRK 180
Query: 181 SLCAKMNDKTATSN----CNNLGGGKEIINIDHEVTATKQSSCC 220
L + + N N G K ++N SCC
Sbjct: 181 VLNSDSYKAELSVNRVSLVNGAGSKKNLLNF----------SCC 214
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 150/217 (69%), Gaps = 12/217 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF +++ + K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR TF++ +WL EL+ + +A +LVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
+ R+V EEGK LAE EGL+FMETSA+ + NV+ AF +I +I+ +K L +
Sbjct: 130 ENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 190 TATSN----CNNLGGGKEIINIDHEVTATKQSSCCYK 222
+ N NN G K+ + + SSCC +
Sbjct: 190 ELSLNRVTLVNNSDGSKQ--------SQSYFSSCCSR 218
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 153/216 (70%), Gaps = 4/216 (1%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGK+ +LSRF ++EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 20 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIW 79
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDIT+R TF++ +W+ ELR + + I+LVGNK
Sbjct: 80 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNK 139
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
+DL R V E+ +E +GL+F ETSA+ NVE AF +++ +I+ +K+L +
Sbjct: 140 ADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKAL--EC 197
Query: 187 NDKTATSNCNNLGGGK-EIINI-DHEVTATKQSSCC 220
+ K+ + +NL G K ++I+ D E++ K+ S C
Sbjct: 198 DGKSNGCDASNLKGSKIDVISASDLEISEVKKLSAC 233
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 140/181 (77%), Gaps = 2/181 (1%)
Query: 4 SYDEEC--DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
S DEE +YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF +++ + K +
Sbjct: 2 SSDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV 61
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQERFRA+TS+YYRGA+GAL+VYDI+RR TF++ +WL EL+ + +A++
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMM 121
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNK DL + R+V+ EE K LAE EGL+FMETSA+ + NV+ AF +I +I+ +K
Sbjct: 122 LVGNKCDLENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKV 181
Query: 182 L 182
L
Sbjct: 182 L 182
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 146/217 (67%), Gaps = 5/217 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E DY+FK V+IGDSAVGK+ +LSRF +DEF DSK TIGVEF R + + K+IKAQIW
Sbjct: 14 ERIDYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIW 73
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+L+YDIT+R TF++ +W+ ELR + + I+L+GNK
Sbjct: 74 DTAGQERYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIGNK 133
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL-CAK 185
DL R V E+ AE +GL+F ETSA NV+ AF +++ +I+ T +K+L C
Sbjct: 134 VDLVDLRAVPAEDAVEFAEDQGLFFSETSAFSGDNVDSAFFRLLEEIYDTVCKKALECGN 193
Query: 186 MNDKTATSNCNNLGGGK--EIINIDHEVTATKQSSCC 220
N A + L G K I D E++ K+SS C
Sbjct: 194 GNSNVA--DAITLKGSKIDGISGTDLEISEVKKSSAC 228
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 144/211 (68%), Gaps = 12/211 (5%)
Query: 14 KAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQER 73
K V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 74 FRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSR 133
+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 134 EVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATS 193
V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + D+ A
Sbjct: 121 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA----DRAA-- 174
Query: 194 NCNNLGGGKEIINIDHEVTATKQSS----CC 220
++ G +++I T Q CC
Sbjct: 175 --HDESPGNNVVDISVPPTTDGQKPNKLQCC 203
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/159 (65%), Positives = 123/159 (77%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E D LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQIWD
Sbjct: 41 EYDLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTKTIKAQIWD 100
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RAITS+YYRGA+GALLVYDI + T+ N ++WL+EL++ S + I+LVGNKS
Sbjct: 101 TAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIVIMLVGNKS 160
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAF 166
DL H R V EE K A EGL F+ETSA+ NVE+AF
Sbjct: 161 DLRHLRAVPTEEAKQFATDEGLSFIETSALDASNVENAF 199
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 153/216 (70%), Gaps = 4/216 (1%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGK+ +LSRF ++EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 24 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIW 83
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDIT+R TF++ +W+ ELR + + I+LVGNK
Sbjct: 84 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNK 143
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
+DL R V E+ +E +GL+F ETSA+ NVE AF +++ +I+ +K+L +
Sbjct: 144 ADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKAL--EC 201
Query: 187 NDKTATSNCNNLGGGK-EIINI-DHEVTATKQSSCC 220
+ K+ + +NL G K ++I+ D E++ K+ S C
Sbjct: 202 DGKSNGCDASNLKGSKIDVISASDLEISEVKKLSAC 237
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 148/216 (68%), Gaps = 2/216 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY+FK V+IGDSAVGK+ +LSRFA++EF +SK TIGVEF R++ + K+IKAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIW 78
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDIT+R +F++ +W+ ELR S + I+L+GNK
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNK 138
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL R V+ E+ AE +GL+F ETSA+ NVE +F +++ +IH+ ++SL
Sbjct: 139 GDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDN 198
Query: 187 NDKTATSNCNNLGGGK--EIINIDHEVTATKQSSCC 220
A +N L G K I + E+ K+ S C
Sbjct: 199 GKANADNNVATLKGSKIDVISGAELEIAEMKKLSSC 234
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 141/214 (65%), Gaps = 11/214 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS GKSNLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + T+ N +WL+ELR+ S + I+LVGNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V +E K A L F+ETSA+ NVE AF ++ +I++ K+L + +D
Sbjct: 128 RHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSS-DDV 186
Query: 190 TATSNCNNLGGGKEIINIDHEVT---ATKQSSCC 220
S G E I + TK++ CC
Sbjct: 187 IKPS-------GGETITVQPSADDGGQTKKNGCC 213
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 145/211 (68%), Gaps = 8/211 (3%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSRFAR+EF +SK TIGVEF + + + K +KAQIWDTA
Sbjct: 11 EYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTA 70
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDITRR TF++ K+WL EL C + +LVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATVRMLVGNKCDL 130
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
+ R+V+ EEGK LAE EGL+FMETSA+ + NV AF +I +I+ +K L +
Sbjct: 131 ENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSRKVLNSDSYKA 190
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ N +L G ++ K SCC
Sbjct: 191 ELSENRVSLADGG--------ASSKKGFSCC 213
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 140/211 (66%), Gaps = 7/211 (3%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K +KAQIWDTA
Sbjct: 34 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 93
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI + T+E ++WL+ELR+ + I+LVGNKSDL
Sbjct: 94 GQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSDL 153
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H R V +E K AE L F+ETSA+ + NVE AF ++ +I+++ K +D+
Sbjct: 154 RHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHFGG--DDR 211
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
S G I I + CC
Sbjct: 212 VQVSPVGTNG-----IVISPTTDPQTKKQCC 237
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 129/173 (74%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I V K IKAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAIT++YYRGA+GALLVYDIT+ ++ N +WL+ELR+ + + I+LVGNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
H R V +E K + GL F+ETSA+ NVE AF + I++ +++L
Sbjct: 128 KHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYRIVSRQTL 180
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 139/205 (67%), Gaps = 6/205 (2%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 10 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYR 69
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 70 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAV 129
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
EE K A L F+ETSA+ NVE AF ++ +I++ K+L +
Sbjct: 130 PTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL------DQGEGSG 183
Query: 196 NNLGGGKEIINIDHEVTATKQSSCC 220
LG ++++ I A ++ CC
Sbjct: 184 PVLGNDRKVLEISKSADAEQKKGCC 208
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 155/221 (70%), Gaps = 7/221 (3%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD Y+++ DY+FK V+IGDSAVGK+ LL+RFAR+EF +DSK TIGVEF + + + +K +
Sbjct: 6 GD-YNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER A+TS+YYRGA+GA+LVYD+T+R +F++ KWL ELR + I+
Sbjct: 65 KAQIWDTAGQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIM 122
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK DL R V E+ + A+ E L+FMETSA++ NVE AFL ++ +I++ +KS
Sbjct: 123 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKS 182
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCCYK 222
L A +D A N + L G + II + E + K+ CC K
Sbjct: 183 LTA--DDDDADGNSSLLKGTRIIIPSEQE--SGKRGGCCGK 219
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 148/217 (68%), Gaps = 5/217 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGK+ +LSRF ++EF DSK TIGVEF R + + DK+IKAQIW
Sbjct: 3 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQIW 62
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDIT+R TF++ +W+ ELR + + I+L+GNK
Sbjct: 63 DTAGQERYRAVTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIGNK 122
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL-CAK 185
+DL R V E+ AE +GL+F ETSA+ NV+ AF +++ +I+ +KSL C
Sbjct: 123 ADLVDLRAVPTEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLLEEIYGVICKKSLECGN 182
Query: 186 MNDKTATSNCNNLGGGK--EIINIDHEVTATKQSSCC 220
N A + L G K I D E++ K+ S C
Sbjct: 183 GNPHAA--DAITLRGSKIDGISGTDLEISEMKKLSAC 217
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V++GDS+VGKSNLL+RFAR+EF +SK TIGVEF + + + K IKAQIWDTA
Sbjct: 12 DYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL + +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKTDL 131
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
H+REV+ EG+ LAE +GL+FMETSA+ + NV AF ++ +I+ +K + K
Sbjct: 132 KHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQSLEQKK 191
Query: 190 TATSNCNNLGGGKEII 205
S +L GK ++
Sbjct: 192 ---SELQSLSNGKAVV 204
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 146/211 (69%), Gaps = 12/211 (5%)
Query: 14 KAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQER 73
K V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER
Sbjct: 13 KFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 74 FRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSR 133
+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGNKSDL H R
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLR 132
Query: 134 EVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATS 193
V +E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + D++A
Sbjct: 133 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA----DRSA-- 186
Query: 194 NCNNLGGGKEIINIDHEVTATKQSS----CC 220
++ G +++I T Q S CC
Sbjct: 187 --HDESPGNNVVDISVPPTTDGQKSNKLQCC 215
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + D LFK V+IGDS VGKSNLLSRF ++EF +DSK TIGVEFA R + + K IK
Sbjct: 4 EDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V EE K A+ L F ETSA+ + NV+ AF ++IN I+Q + +
Sbjct: 124 IGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQM 183
Query: 183 CAKMNDKTATSNCN 196
+ D +A N N
Sbjct: 184 --DLGDSSANGNAN 195
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 138/190 (72%), Gaps = 4/190 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF +EF L+SK TIGVEFA +N+ + + +KAQI
Sbjct: 2 DDEYDYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQI 61
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDT+GQER+RAIT +YYRGA+GALLVYDITR+++F+N + WL+ELR+ + I+LVGN
Sbjct: 62 WDTSGQERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVGN 121
Query: 126 KSDLTH-SREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK---S 181
K DL+ SR+V E+G LAE EG F+ETSA+ NV+ AF + + I+ +K S
Sbjct: 122 KVDLSESSRQVTTEDGGSLAEQEGFLFVETSALDATNVDKAFATVFDTIYSNLPKKTNQS 181
Query: 182 LCAKMNDKTA 191
A N TA
Sbjct: 182 ADAATNQPTA 191
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 146/214 (68%), Gaps = 7/214 (3%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
EE DYL+K V+IGDS VGKSNLLSRF R+EF L++K TIGVEFA R I+ K IKAQ+W
Sbjct: 8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVW 67
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYDI ++AT+++ ++W+ ELRE + I+LVGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNK 127
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL H REV+ +E K +E L F+ETSA+ + NVE AF ++ QI+ + S +
Sbjct: 128 SDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPS-HSTG 186
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
T SN + I+ E A K S CC
Sbjct: 187 PQTTIDSNTETI-----ILPTTSEPPAAK-SGCC 214
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 144/214 (67%), Gaps = 6/214 (2%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V++GDSAVGKSNLL+RFAR+EF +SK TIGVEF + + + K +KAQIWDTA
Sbjct: 12 DYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDINGKEVKAQIWDTA 71
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL+ + +LVGNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA---KM 186
+REV+ EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K + + K
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKK 191
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D L G + N + + K CC
Sbjct: 192 QDAPLDGKTVVLQGDE---NQERATESPKSGGCC 222
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + D LFK V+IGDS VGKSNLLSRF ++EF +DSK TIGVEFA R + + K IK
Sbjct: 4 EDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V EE K A+ L F ETSA+ + NV+ AF ++IN I+Q + +
Sbjct: 124 IGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQM 183
Query: 183 CAKMNDKTATSNCN 196
+ D +A N N
Sbjct: 184 --DLGDSSANGNAN 195
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/223 (51%), Positives = 142/223 (63%), Gaps = 13/223 (5%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF +EF +DSK TIGVEFA R I V K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V EE K A L F ETSA+ + NV+ AF ++I IHQ +
Sbjct: 124 IGNKSDLAHLRAVPTEEAKQFASENQLLFTETSALNSDNVDLAFKELITAIHQKVSKH-- 181
Query: 183 CAKMNDKTATSNCNNLGGGK--EIINIDHEVTATKQSS---CC 220
+ SN N G G I++ K+SS CC
Sbjct: 182 ------QVELSNANKPGAGPNGPTISLTPAPNEKKKSSSNNCC 218
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + D LFK V+IGDS VGKSNLLSRF ++EF +DSK TIGVEFA R + + K IK
Sbjct: 4 EDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V EE K A+ L F ETSA+ + NV+ AF ++IN I+Q + +
Sbjct: 124 IGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQM 183
Query: 183 CAKMNDKTATSNCN 196
+ D +A N N
Sbjct: 184 --DLGDSSANGNAN 195
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 140/206 (67%), Gaps = 7/206 (3%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 16 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYR 75
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 76 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAV 135
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 136 PTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL------DQGEGGQ 189
Query: 196 NNLGGGKEIINIDHEV-TATKQSSCC 220
N LGG ++++ I K++ CC
Sbjct: 190 NVLGGERKVLEISKSADEGQKKNGCC 215
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/167 (61%), Positives = 128/167 (76%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 19 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 78
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGNKSDL H R V
Sbjct: 79 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 138
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 139 PTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 185
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 150/214 (70%), Gaps = 11/214 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF +SK TIGVEF +++ + K +KAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDITRR TFE+ +WL EL+ + +A +LVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
+ R V+ EEGK LAE EGL+F+ETSA+ + NV+ AF +I I+ +K L +
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQS---SCC 220
T N +L + + +A+KQS SCC
Sbjct: 190 ELTVNRVSL--------VKDDNSASKQSSGFSCC 215
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 150/214 (70%), Gaps = 11/214 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF +SK TIGVEF +++ + K +KAQIWDTA
Sbjct: 53 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 112
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDITRR TFE+ +WL EL+ + +A +LVGNK DL
Sbjct: 113 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 172
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
+ R V+ EEGK LAE EGL+F+ETSA+ + NV+ AF +I I+ +K L +
Sbjct: 173 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 232
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQS---SCC 220
T N +L + + +A+KQS SCC
Sbjct: 233 ELTVNRVSL--------VKDDNSASKQSSGFSCC 258
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 146/234 (62%), Gaps = 16/234 (6%)
Query: 3 DSYD---EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
D YD +LFK V+IGDS GKSNLLSRF R+EF LDSK TIGVEFA R+I+V K
Sbjct: 4 DEYDVSPRPLTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSK 63
Query: 60 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMA 119
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI++ T++N +WL+ELR+ S +
Sbjct: 64 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIV 123
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
I+LVGNKSDL H R V EE K A L F+ETSA+ NVE AF ++ I I
Sbjct: 124 IMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTGIAPVGIS 183
Query: 180 K--SLCAKM-----------NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K SL A + S ++G ++II+I+ + CC
Sbjct: 184 KRRSLTAILFFVEIYRIVSSKALEGESGGASVGERRQIIDIEKTQDTENKGGCC 237
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 128/168 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+ GDS VGKSNLLSRF R+EF L+SK TIGVEFA +++ + + IKAQI
Sbjct: 10 DDKYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAIT++YYRGA+GALLVYDIT+R TF N + WL ELR + I+LVGN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIMLVGN 129
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
K DL H R + E+ K+ AE GL+FMETSA+++ VE+AF ++ I
Sbjct: 130 KCDLRHLRTILTEDAKLWAERHGLFFMETSALESTGVENAFYSILRTI 177
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 143/209 (68%), Gaps = 12/209 (5%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 60
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 61 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 120
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
+E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + D+ A
Sbjct: 121 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA----DRAA---- 172
Query: 196 NNLGGGKEIINIDHEVTATKQSS----CC 220
++ G +++I T Q CC
Sbjct: 173 HDESPGNNVVDISVPPTTDGQKPSKLQCC 201
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 133/173 (76%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLL+R+AR+EF L SK TIGVEF + + + K +KAQIWDTA
Sbjct: 2 EYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTA 61
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA GAL+VYDITRR TF++ +WL EL+ + +A +LVGNK DL
Sbjct: 62 GQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDL 121
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+ R V+ EEGK LAE+EG++FMETSA+ NV AF +I +I+ + +K L
Sbjct: 122 DNIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVL 174
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + D LFK V+IGDS VGKSNLLSRF ++EF +DSK TIGVEFA R + + K IK
Sbjct: 4 EDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V EE K A+ L F ETSA+ + NV++AF ++IN I+Q + +
Sbjct: 124 IGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDEAFEELINTIYQKVSKHQM 183
Query: 183 CAKMNDKTATSNCN 196
+ D + N N
Sbjct: 184 --DLGDSSTNGNVN 195
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 143/209 (68%), Gaps = 12/209 (5%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 62 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
+E + AE L F+ETSA+ + NVE+AF ++ +I++ QK + D+ A
Sbjct: 122 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA----DRAA---- 173
Query: 196 NNLGGGKEIINIDHEVTATKQSS----CC 220
++ G +++I T Q CC
Sbjct: 174 HDESPGNNVVDISVPPTTDGQKPNKLQCC 202
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 139/205 (67%), Gaps = 6/205 (2%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF LD+K TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 23 VLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYR 82
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI++ T++N +WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 83 AITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAV 142
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
EE K A L F+ETSA+ NVE AF ++ +I++ K+L + S
Sbjct: 143 PTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL------DSGDSGQ 196
Query: 196 NNLGGGKEIINIDHEVTATKQSSCC 220
LG + +++I+ + CC
Sbjct: 197 AGLGDRRPVVDINPSQDPETKQGCC 221
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 145/218 (66%), Gaps = 1/218 (0%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF DEF L+SK TIGVEFA R I V K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++++++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL+H R V +E K A+ L F ETSA+ + NV+ AF ++I I+Q + +
Sbjct: 124 IGNKSDLSHLRAVPTDEAKKFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQV 183
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+++ T N G + +E + ++CC
Sbjct: 184 DLGVDNNNNTLNAPK-GPTISLTPAPNEKKKSSSNNCC 220
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 139/190 (73%), Gaps = 1/190 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IG S VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I LVG
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIRLVGT 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KS L H R V +E + +E L F+ TSA+ + NVE+AF ++ +I++ QK + +
Sbjct: 125 KSALRHLRAVPTDEARAFSEKNNLSFIATSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 -MNDKTATSN 194
+D++ +N
Sbjct: 185 AAHDESPGNN 194
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 144/212 (67%), Gaps = 8/212 (3%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK V+IGDS VGKSNLLSRFAR+EF DSK TIGVEFA R+I K IK+QIWDTAG
Sbjct: 8 YLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQIWDTAG 67
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QER+RAITS+YYRGA+GALLVYDI+++ TFE+ ++WL+ELR+ + + I+LVGNKSDL
Sbjct: 68 QERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLVGNKSDLK 127
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
R V EE K A L FMETSA+ NVE AF ++ +++ K++ + N +
Sbjct: 128 SLRAVPTEEAKEFATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAMENESN-RV 186
Query: 191 ATSNCNNLGGGKEIINIDHEVTATKQSS--CC 220
AT G GK I + T K +S CC
Sbjct: 187 ATGP----GAGKS-ITVAPTTTNAKPASGKCC 213
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 151/216 (69%), Gaps = 5/216 (2%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
Y+++ DY+FK V+IGDSAVGKS LL+RFAR+EF +DSK TIGVEF + + + +K +KAQ
Sbjct: 7 YNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHNKTVKAQ 66
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ +WL ELR + I+L+G
Sbjct: 67 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKSIIIMLIG 126
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK DL R V E+ K A+ E L+FMETSA++ NVE AFL M+ +I++ +++L
Sbjct: 127 NKCDLGSLRAVPAEDAKEFAQRENLFFMETSALEATNVETAFLTMLTEIYRIISKRTLAG 186
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
ND++ N G + I + + +++ CC
Sbjct: 187 --NDES-NENSGAFKGTR--ILVPSQEQNSEKKGCC 217
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 148/217 (68%), Gaps = 5/217 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGK+ LLSRF ++EF DSK TIGVEF R + + K++KAQIW
Sbjct: 15 EKIDYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTIKGKVVKAQIW 74
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDIT+RATF++ +W+ ELR + + I L+GNK
Sbjct: 75 DTAGQERYRAVTSAYYRGALGAMLVYDITKRATFDHVARWVEELRAHADNSIVITLIGNK 134
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL-CAK 185
+DL R V E+ AE +GL+F ETSA+ NV+ AF +++ +I+ +KSL C
Sbjct: 135 ADLVDQRAVPTEDAVEFAEDQGLFFSETSALSGDNVDRAFFRLLEEIYGVISKKSLECG- 193
Query: 186 MNDKTATSNCNNLGGGK--EIINIDHEVTATKQSSCC 220
KT ++ L G K I D E++ K+ S C
Sbjct: 194 -GHKTNGADSVMLRGSKIDVISGSDLEISEMKKLSAC 229
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 143/219 (65%), Gaps = 11/219 (5%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D YD E V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IK
Sbjct: 4 DEYDREP----TVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIK 59
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+L
Sbjct: 60 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIML 119
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V EE K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 120 VGNKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL 179
Query: 183 CAKMNDKTATSNCNNLGGGKEI-INIDHEVTATKQSSCC 220
+ S +G G I ++ + A K CC
Sbjct: 180 ------DSGDSAQATIGAGTNISLSKPADDDAAKGGKCC 212
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/199 (52%), Positives = 141/199 (70%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG + DYLFK V+IGDSAVGKSNLLSR++R+EF L+S+ TIGVEF +++ + K
Sbjct: 1 MGHGGSDGDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKE 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQERFRA+TS+YYRGA+GA++VYDI+++ TFEN ++WL ELR + +
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVT 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL R+V+ EE LAE EGL+F+ETSA+ + NV AF +I +I +K
Sbjct: 121 MLVGNKSDLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLG 199
L + + S LG
Sbjct: 181 ILSSDSSKAGTLSGTKKLG 199
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 105/199 (52%), Positives = 141/199 (70%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG + DYLFK V+IGDSAVGKSNLLSR++R+EF L+S+ TIGVEF +++ + K
Sbjct: 1 MGHGGSDGDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKE 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQERFRA+TS+YYRGA+GA++VYDI+++ TFEN ++WL ELR + +
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVT 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL R+V+ EE LAE EGL+F+ETSA+ + NV AF +I +I +K
Sbjct: 121 MLVGNKSDLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKK 180
Query: 181 SLCAKMNDKTATSNCNNLG 199
L + + S LG
Sbjct: 181 ILSSDSSKARTLSGTKKLG 199
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 150/214 (70%), Gaps = 11/214 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF +SK TIGVEF +++ + K +KAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVKAQIWDTA 69
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDITRR TFE+ +WL EL+ + +A +LVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
+ R V+ +EGK LAE EGL+F+ETSA+ + NV+ AF +I I+ +K L +
Sbjct: 130 ENIRAVSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQS---SCC 220
T N +L + + +A+KQS SCC
Sbjct: 190 KLTVNRVSL--------VKDDNSASKQSSGFSCC 215
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 150/214 (70%), Gaps = 11/214 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF +SK TIGVEF +++ + K +KAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDITRR TFE+ +WL +L+ + +A +LVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARMLVGNKCDL 129
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
+ R V+ EEGK LAE EGL+F+ETSA+ + NV+ AF +I I+ +K L +
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 190 TATSNCNNLGGGKEIINIDHEVTATKQS---SCC 220
T N +L + + +A+KQS SCC
Sbjct: 190 ELTVNRVSL--------VKDDNSASKQSSGFSCC 215
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 135/194 (69%), Gaps = 2/194 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + D LFK V+IGDS VGKSNLLSRF ++EF +DSK TIGVEFA R + + K IK
Sbjct: 4 EDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V EE K A+ L F ETSA+ + NV+ AF ++IN I+Q + +
Sbjct: 124 IGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQM 183
Query: 183 CAKMNDKTATSNCN 196
+ D + N N
Sbjct: 184 --DLGDSSTNGNVN 195
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 150/216 (69%), Gaps = 11/216 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDSAVGKSNLL+R+AR+EF +SK TIGVEF + +++ K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDGKEIKAQIWDTA 71
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR TF+N +WL EL + V+VGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNVVTVIVGNKTDL 131
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL-CAKMND 188
+REV+ EEG LAE + +YF+ETSA+ + NV+ AF ++ +I+ +K L C +
Sbjct: 132 LDAREVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNILSRKVLSCQEQKL 191
Query: 189 KTATSNCNNLGGGKEIINIDHEVTATKQSS----CC 220
++ SN GK ++ + E +T + + CC
Sbjct: 192 ESKISN------GKTVVLQEAESESTAKQTGKLWCC 221
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK-LIKAQI 65
E DYLFK V+IGD+ VGKSNLL R+ +++F+++S+ TIGVEFA RN+++GD +KAQI
Sbjct: 10 ENYDYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKMGDDCYVKAQI 69
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAIT++YYR A+GAL+VYDI++ +FEN +KW++ELR+ S +AI L+GN
Sbjct: 70 WDTAGQERYRAITNAYYRNAVGALMVYDISKPNSFENIQKWMQELRDHADSNIAITLIGN 129
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
KSDL H R V E+ + LA+T + F+ETSA+ ++NV+ AF+ +IN+I++ T+
Sbjct: 130 KSDLKHLRAVKFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLINEIYRLTL 182
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 143/205 (69%), Gaps = 6/205 (2%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V +K +KAQIWDTAGQER+R
Sbjct: 31 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 90
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+EL++ + + I+LVGNKSDL H R V
Sbjct: 91 AITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRAV 150
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
+E + AE GL F+ETSA+ + NVE AF ++++I++ Q+ + + + S+
Sbjct: 151 PTDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQITGQAESEFGPSST 210
Query: 196 NNLGGGKEIINIDHEVTATKQSSCC 220
E I + +Q+ CC
Sbjct: 211 ------IEPIQVLPTQQEGRQAPCC 229
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 132/172 (76%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK V+IGDSAVGKSNLLSRFAR+EF +SK TIGVE + + + K +KAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAG 71
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QERFRA+TS+YYRGA GAL+VYDI+RR TFE+ K+WL EL S +A +LVGNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+ REV+ EEGK LAE EGL+FMETSA+ + NV+ AF +I +I+ +K L
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVL 183
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 128/169 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYLFK V+IGDS VGKSNLLSRF RD F L+SK TIGVEFA RN+ + K+IKAQI
Sbjct: 21 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 80
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GAL+VYD+ + +F N WL ELR+ + ++LVGN
Sbjct: 81 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 140
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
K DL H R V E+ + A+ +GL F+ETSA+ + NVE+AF Q++ I+
Sbjct: 141 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIY 189
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 129/173 (74%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF +EF L+SK TIGVEFA R I+V DK IK
Sbjct: 5 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVEDKKIK 64
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ T+EN WL EL+E +AI L
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENADDNVAIGL 124
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+GNKSDL H R V EE + A L+F ETSA+ + NV+ AF ++I QI++
Sbjct: 125 IGNKSDLEHLRAVPTEEARGFASENQLFFTETSALNSENVDLAFRELIEQIYK 177
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 133/190 (70%), Gaps = 10/190 (5%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D ++ DYLFK V++GDS VGKSNLLSRF R+ F LDSK TIGVEFA R I+V K IK
Sbjct: 10 DQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIK 69
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSS-CMAIV 121
AQIWDTAGQER+RAITS+YYRGA GALLVYD+TR TFE+ +WLRELR+ A++
Sbjct: 70 AQIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVM 129
Query: 122 LVGNKSDLT---------HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQ 172
LVGNK+DL H R V + LAE EGL F+ETSA+ NV+ AF ++ +
Sbjct: 130 LVGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTE 189
Query: 173 IHQTTIQKSL 182
I++ +K+L
Sbjct: 190 IYRAVSRKAL 199
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + D LFK V+IGDS VGKSNLLSRF ++EF +DSK TIGVEFA R + + K IK
Sbjct: 4 EDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V EE K A L F ETSA+ + NV+ AF ++IN I+Q + +
Sbjct: 124 IGNKSDLAHLRAVPTEESKTFALENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQM 183
Query: 183 CAKMNDKTATSNCNNL 198
+ D A N N +
Sbjct: 184 --DLGDSAANGNANGM 197
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/199 (52%), Positives = 135/199 (67%), Gaps = 1/199 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D+ DYLFK V++GDS VGKSNLLSRF R+EF L+SK TIGVEFA R I + +K+
Sbjct: 1 MSGETDDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKI 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYD+T T++N +KWL ELR+ + + I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ- 179
+LVGNK DL H R + AE EGL F+ETSA+ NVE AF+ + +++ +
Sbjct: 121 MLVGNKCDLEHLRVTEAATAQQFAEKEGLMFIETSALNATNVEHAFIDSLGRVYDVVSKL 180
Query: 180 KSLCAKMNDKTATSNCNNL 198
K C A+ C +
Sbjct: 181 KMACTPSQSAAASLVCRTV 199
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 134/183 (73%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD E DY+FK VMIGDS VGKS LL+RF R+EF L SK TIGVEF + + + KL+
Sbjct: 6 GDLDHEGIDYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLV 65
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER++AIT++YYRGA GALL YDIT+R TF + +KWL EL + ++
Sbjct: 66 KAQIWDTAGQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADKNIVVM 125
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL+ REV EE + LA+ +G +F+ETSA+ + NVE AFL +++QI+ T +K
Sbjct: 126 LVGNKSDLSSIREVPIEEAEDLAKQKGFFFIETSALDSNNVEPAFLGLLSQIYVTMSKKH 185
Query: 182 LCA 184
+ A
Sbjct: 186 ITA 188
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 136/173 (78%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF L SK TIGVEF + + + K +KAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTA 70
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR+TF++ +WL EL+ + +A++LVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 130
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+ R+V+ E+G LAE EGL+FMETSA+ + NV+ AF +I +I+ +K L
Sbjct: 131 ENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVL 183
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 127/167 (76%)
Query: 17 MIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFRA 76
+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+RA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 77 ITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREVN 136
ITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LVGNKSDL H R V
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 123
Query: 137 EEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
+E K AE GL F+ETSA+ + NVE AF ++ +I++ QK +
Sbjct: 124 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIV 170
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 131/171 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYL K V+IGDS VGKSNLLSRFA++EF L+SK TIGVEF + I G K+IKAQI
Sbjct: 6 EDEYDYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKIIKAQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+ A LVYDIT+ TF+N +KWL+EL+++ S + ++LVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVVMLVGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQT 176
K+DL + R V E+ +I AE L F+ETSA+ + NV +AF Q+I H +
Sbjct: 126 KTDLNNLRAVKVEDAQIYAEKNELAFIETSALDSTNVVEAFEQIIQIYHNS 176
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 143/218 (65%), Gaps = 3/218 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ ++E+ +WL+ELRE + + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADANIVIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V EE K A L F E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
ND +S + G + E + K S+CC
Sbjct: 186 --DTNDTVGSSKPSG-GPTISLTPAPQEKRSGKNSNCC 220
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 142/214 (66%), Gaps = 6/214 (2%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+ GDSAVGKSNLL+RFAR+EF DSK TIGVE + + + K +KAQIWDTA
Sbjct: 12 DYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDINGKEVKAQIWDTA 71
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GALLVYDI+RR TF++ +WL EL+ + +LVGNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA---KM 186
+REV+ EGK LAE +GL+FMETSA+ + NV AF ++ +I+ +K + + K
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKK 191
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D L G + N + + K CC
Sbjct: 192 QDAPLDGKTVVLQGDE---NQERATESPKSGGCC 222
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 143/220 (65%), Gaps = 7/220 (3%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ ++E+ +WL+EL+E + + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V +E K A L F E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
Query: 183 CAKMNDKTATSNCNNLGGGKEI--INIDHEVTATKQSSCC 220
D + +N N GG I E + S+CC
Sbjct: 186 -----DTSDGANANKPSGGPTISLTPAPQEKKSKSSSNCC 220
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 138/180 (76%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
Y+++ DY+FK V+IGDSAVGK+ LL+RFA+++F +DSK TIGVEF + + + +K +KAQ
Sbjct: 9 YNQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQ 68
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F+N KWL ELR + ++L+G
Sbjct: 69 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIG 128
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK DL R V E+ + A+ E L+FMETSA+++ NVE AFL ++ +I++ +K+L A
Sbjct: 129 NKCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTA 188
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 132/173 (76%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+YLFK V+IGDSAVGKSNLLSR+AR+EF SK TIGVE +N+ + K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVKAQIWDTA 69
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
QERFRA+TS+YYRGA+GAL+VYDI+RR+TFE+ +WL EL+ + +A +LVGNK DL
Sbjct: 70 CQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R V+ EEGK LAETEGL+FMETSA+ + NV+ AF +I I+ +K L
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 134/191 (70%), Gaps = 14/191 (7%)
Query: 6 DEECDYLFKA--------------VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAY 51
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA
Sbjct: 3 NDEYDFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFAT 62
Query: 52 RNIRVGDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELR 111
R+I+V K IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI++ T++N +WL+ELR
Sbjct: 63 RSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELR 122
Query: 112 EFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMIN 171
+ S + I+LVGNKSDL H R V +E K A L F+ETSA+ NVE AF ++
Sbjct: 123 DHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILT 182
Query: 172 QIHQTTIQKSL 182
+I++ K+L
Sbjct: 183 EIYRIVSSKAL 193
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 138/183 (75%), Gaps = 1/183 (0%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD Y+++ DY+FK V+IGDSAVGK+ LL+RF+R+EF +DSK TIGVEF + + + K +
Sbjct: 6 GD-YNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ +WL ELR + I+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK DL R V E+ + AE E L+FMETSA+++ NVE AF ++ +I++ +KS
Sbjct: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKS 184
Query: 182 LCA 184
L A
Sbjct: 185 LAA 187
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 133/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ D L K V+IGDS VGK+N LSRF R EF+ SKPTIGVEFA + + + LIK QI
Sbjct: 8 DDDYDMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKCQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAIT++YYRGA+GALLVYD+TR ++FE+ +WL ELRE SS M ++LVGN
Sbjct: 68 WDTAGQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
K+DL R+V+ ++G+ LA+ EGL F+ETSA+ NVE AF ++ +IH ++ L
Sbjct: 128 KTDLVDQRDVSMQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVRKRRL 184
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 142/220 (64%), Gaps = 7/220 (3%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ ++E+ +WL+EL+E + + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADANIVIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V +E K A L F E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
Query: 183 CAKMNDKTATSNCNNLGGGKEI--INIDHEVTATKQSSCC 220
D SN N GG I E + S+CC
Sbjct: 186 -----DTNEGSNGNKPSGGPTISLTPAPQEKKSKNNSNCC 220
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 145/197 (73%), Gaps = 3/197 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GD ++++ DY+FK V+IGDSAVGK+ LL+RF+R++F +DSK TIGVEF + + + K +
Sbjct: 6 GD-FNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKTV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ KWL ELR + + I+
Sbjct: 65 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTNIVIM 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNK DL + V E+ + A+ E L+FMETSA+++ NVE AFL ++ +I++ +K+
Sbjct: 125 LIGNKCDLATLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLIGKKT 184
Query: 182 LCAKMNDKTATSNCNNL 198
L A ND T S +
Sbjct: 185 LTA--NDDTDPSGSSGF 199
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 148/220 (67%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ SREV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K A +N LG G E+ ++ +CC
Sbjct: 175 AKVSKQRQNNARTNAVTLGSGPA----GQELGPGEKRACC 210
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 147/225 (65%), Gaps = 13/225 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+ E DY+FK V++GDSAVGK+ LL RF +DEF LDSK TIGVEF R + + K +KAQI
Sbjct: 24 EAEIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQI 83
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RA+TS+YYRGALGA++VYDITRR TFEN +W+ ELR + L+GN
Sbjct: 84 WDTAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGN 143
Query: 126 KSDLTHS-REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
K+D+ S REV +E AE +GL+F E SA+ NVE AFL ++ +I +++L
Sbjct: 144 KADMPASRREVAADEAARFAEEQGLFFSEASALSGDNVERAFLTLLEEIFAVVSRRAL-- 201
Query: 185 KMNDKTATSNCNNLGGGKEIINID---------HEVTATKQSSCC 220
++++ N G G E++++ E +A K+SS C
Sbjct: 202 ELDEARRMRN-GGAGAGGEVLSLKGTTLDVGSIMETSAMKKSSQC 245
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 130/171 (76%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYL+K V+IGDS VGKS+LLSRF R+EF ++SK TIGVEFA R+I+V K+IKAQ+WDTA
Sbjct: 10 DYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTA 69
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GA+LVYD+T++ TF++ ++WL E+RE + ++LVGNK DL
Sbjct: 70 GQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDL 129
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
H R V ++ K + GL F+E SA+ NVE+AF Q I ++H + K
Sbjct: 130 KHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITKLHHVQLAK 180
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 140/209 (66%), Gaps = 15/209 (7%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGK+ +LSRF ++EF DSK TIGVEF + + + KLIKAQIW
Sbjct: 15 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIW 74
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDIT+R TF++ +W+ ELR + I+L+GNK
Sbjct: 75 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIGNK 134
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL R V E+ AE +GL+F ETSA NV AFL+++ +I++ ++SL
Sbjct: 135 GDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSL---- 190
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATK 215
CNN G N +H+V A K
Sbjct: 191 -------ECNNGIKG----NGNHDVAALK 208
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 139/206 (67%), Gaps = 7/206 (3%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 5 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYR 64
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGNKSDL H R V
Sbjct: 65 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAV 124
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
EE K A L F+ETSA+ NVE AF ++ +I++ K+L S
Sbjct: 125 PTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL------DGGDSAQ 178
Query: 196 NNLGGGKEI-INIDHEVTATKQSSCC 220
+G G I ++ + A+K CC
Sbjct: 179 ATIGAGTNISLSKPADDDASKGGKCC 204
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 138/205 (67%), Gaps = 7/205 (3%)
Query: 17 MIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFRA 76
MIGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQIWDTAGQER+RA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 77 ITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREVN 136
ITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGNKSDL H R V
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 120
Query: 137 EEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNCN 196
EE K A L F+ETSA+ NVE AF ++ +I++ K+L + S
Sbjct: 121 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL------DSGDSAQA 174
Query: 197 NLGGGKEI-INIDHEVTATKQSSCC 220
+G G I ++ + A K CC
Sbjct: 175 TIGAGTNISLSKPADDDAAKGGKCC 199
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 129/173 (74%), Gaps = 5/173 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DYLFK V++GDS VGKSNLLSRF R+ F LDSK TIGVEFA R I+V K IKAQIW
Sbjct: 15 DDYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTIKAQIW 74
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSS-CMAIVLVGN 125
DTAGQER+RA+TS+YYRGA+GALLVYD+T+ ATF N +WLRELR+ A++LVGN
Sbjct: 75 DTAGQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDHADGRGTAVMLVGN 134
Query: 126 KSDLTHS----REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
K+DL R V +G LAE EGL F+ETSA+ NV+ AF+ ++ +I+
Sbjct: 135 KTDLAKQRGGLRAVPRGDGAALAEREGLSFVETSALDATNVDAAFVTLLTEIY 187
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 144/232 (62%), Gaps = 24/232 (10%)
Query: 6 DEECDYLFKA-----------------VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVE 48
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVE
Sbjct: 3 NDEYDFLFKGTSYTPRPAMSNPILRALVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 62
Query: 49 FAYRNIRVGDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLR 108
FA R+I+V K IK+QIWDTAGQER+RAITS+YYRGA+GALLVYDI++ T+EN +WL+
Sbjct: 63 FATRSIQVDSKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLK 122
Query: 109 ELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQ 168
ELR+ S + I+LVGNKSDL H R V EE K A L F+ETSA+ NVE AF
Sbjct: 123 ELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQN 182
Query: 169 MINQIHQTTIQKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ +I + K+L + + N ++++ I + CC
Sbjct: 183 ILTEIFRIVSSKAL-------DSGDSAQNPLSDRKVVEITKTQDPESKQGCC 227
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 148/220 (67%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ SREV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLREIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K A +N LG G E+ ++ +CC
Sbjct: 175 AKVSKQRQNNARTNAITLGSGP----TGQELGPGEKRACC 210
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 139/205 (67%), Gaps = 7/205 (3%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 12 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 71
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYD T+ TF N ++WL+ELRE + I+LVGNK D H R +
Sbjct: 72 AITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRAI 131
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
++G AET L F+ETSA+ NVE AF ++ +I++ K+L + TS
Sbjct: 132 KTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL------ENGTSGQ 185
Query: 196 NNLGGGKEIINIDHEVTATKQSSCC 220
N L G ++++ I A + CC
Sbjct: 186 NPL-GDRKVVEITKSQDADAKQKCC 209
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 140/209 (66%), Gaps = 15/209 (7%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGK+ +LSRF ++EF DSK TIGVEF + + + KLIKAQIW
Sbjct: 4 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIW 63
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYDIT+R TF++ +W+ ELR + I+L+GNK
Sbjct: 64 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIGNK 123
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL R V E+ AE +GL+F ETSA NV AFL+++ +I++ ++SL
Sbjct: 124 GDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSL---- 179
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATK 215
CNN G N +H+V A K
Sbjct: 180 -------ECNNGIKG----NGNHDVAALK 197
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 143/209 (68%), Gaps = 12/209 (5%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGNKSDL H R V
Sbjct: 62 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
+E + AE L F+ETSA+ + VE+AF ++ +I++ QK + D++A
Sbjct: 122 PTDEARAFAEKNTLSFIETSALDSTKVEEAFKNILTEIYRIVSQKQIA----DRSA---- 173
Query: 196 NNLGGGKEIINIDHEVTATKQS----SCC 220
++ G +++I T Q CC
Sbjct: 174 HDESPGNNVVDISLPPTTDSQRGDKLPCC 202
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 130/173 (75%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDSAVGKSNLLSR+AR+EF ++SK TIGVEF +++ K IKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQIWDTA 67
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+TS+YYRGA+GAL+VYDI+RR TFE+ +WL EL+ + +LVGNK DL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGNKCDL 127
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
REV EE K LAE E L+F+ETSA+ NV DAF +I +++ +K+L
Sbjct: 128 ETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKAL 180
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 131/177 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D DYLFK V+IGDSAVGKSNLLSR+AR+EF ++SK TIGVEF +++ K IKAQI
Sbjct: 4 DPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS+YYRGA+GAL+VYDI+RR TFE+ +WL EL+ + +LVGN
Sbjct: 64 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
K DL REV EE K LAE E L+F+ETSA+ NV DAF +I +++ +K+L
Sbjct: 124 KCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKAL 180
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 147/234 (62%), Gaps = 25/234 (10%)
Query: 6 DEECDYLFKA-------------------VMIGDSAVGKSNLLSRFARDEFRLDSKPTIG 46
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIG
Sbjct: 3 NDEYDFLFKGNVATFPAQSPQLFIPFRYVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIG 62
Query: 47 VEFAYRNIRVGDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKW 106
VEFA R+I+V K IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI++ T++N +W
Sbjct: 63 VEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRW 122
Query: 107 LRELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAF 166
L+ELR+ S + I+LVGNKSDL H R V +E K A L F+ETSA+ NVE AF
Sbjct: 123 LKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAF 182
Query: 167 LQMINQIHQTTIQKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ +I++ K++ + AT L G+ I T +KQ CC
Sbjct: 183 QNILTEIYRIVSSKAIIEGGDSGQAT-----LSSGRTIEVSKTPDTESKQ-GCC 230
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 133/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE DY+FK VM GDS VGKS LL+RF ++EF + SKPTIGVEF R + + KL+KAQI
Sbjct: 9 DEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQI 68
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER++AIT++YYRGA GALL YDIT++ TF++ +KWL ELR + ++LVGN
Sbjct: 69 WDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGN 128
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL+ R V E + A+ EGL+F+ETSA+ + NVE AF+ +++Q+++T +K +
Sbjct: 129 KSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHI 185
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 138/205 (67%), Gaps = 5/205 (2%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 10 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYR 69
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGNKSDL H R V
Sbjct: 70 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAV 129
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
+E K A L F+ETSA+ NVE AF ++ +I++ K+L + +
Sbjct: 130 PTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGAQATIGAG 189
Query: 196 NNLGGGKEIINIDHEVTATKQSSCC 220
N+ K D E A+K CC
Sbjct: 190 TNISLSKA---ADDE--ASKSGKCC 209
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 129/173 (74%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF +EF L+SK TIGVEFA R I V K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN + WL ELR + +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADANVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+GNKSDL H R V +E K A+ L F ETSA+Q+ NV+ AF ++I I+Q
Sbjct: 124 IGNKSDLDHMRAVPTDEAKNFAQENQLLFTETSALQSSNVDQAFRELITAIYQ 176
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 150/220 (68%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+H+REV +E ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSHAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K A +N LG + E+ + ++ +CC
Sbjct: 175 TKVSKQRQNNARANAITLGSAQP----GQELGSEEKKACC 210
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 130/173 (75%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M ++++ DY+FK V+IGDSAVGKS LL+RFAR+EF LDSK TIGVEF R + + +
Sbjct: 4 MHGEFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAIDKRT 63
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ +WL ELR + I
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKNIVI 123
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+L+GNKSDL R V E+ K AE E L+FMETS +++ NVE AF ++ +I
Sbjct: 124 MLIGNKSDLGTLRAVPTEDAKEFAERENLFFMETSVLESXNVESAFQTVLTEI 176
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 127/173 (73%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF +EF ++SK TIGVEFA R I V K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +T+EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+GNKSDL H R V +E K A+ L F ETSA+ + NV+ AF ++I I+Q
Sbjct: 124 IGNKSDLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQ 176
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 148/220 (67%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ SREV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K A +N LG G E+ ++ +CC
Sbjct: 175 AKVSKQRQNNARTNAVILGSGPA----GQELGPGEKRACC 210
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 142/217 (65%), Gaps = 5/217 (2%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
SYD E YLFK V++G+S+VGKSNLLSRF RDEF ++SK TIGVEFA R I V K IKA
Sbjct: 9 SYDYE--YLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVDGKRIKA 66
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RA+T++YYRGA+GALLVYDI+ +++E +WL EL++ + + + LV
Sbjct: 67 QIWDTAGQERYRAVTAAYYRGAVGALLVYDISNSSSYEGASRWLSELKDHADANIVVELV 126
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
GNKSDL H R V +E K A +GL F E SA+ + NVE AF Q+I I+ +
Sbjct: 127 GNKSDLNHLRAVPTDEAKSFATEKGLLFTEASALNSENVELAFQQLIKAIYDMVSKHQF- 185
Query: 184 AKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
MND N GG + + + K+ SCC
Sbjct: 186 -DMND-YGNDNKPITGGQTITLTPTPKDSKIKKDSCC 220
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 127/171 (74%)
Query: 12 LFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQ 71
+ V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQIWDTAGQ
Sbjct: 3 VLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 62
Query: 72 ERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTH 131
ER+RAITS+YYRGA+GALLVYDI++ T++N +WL+ELR+ S + I+LVGNKSDL H
Sbjct: 63 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 122
Query: 132 SREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R V +E K A L F+ETSA+ NVE AF ++ +I++ K+L
Sbjct: 123 LRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL 173
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 14 KAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQER 73
K + DS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQIWDTAGQER
Sbjct: 7 KPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQER 66
Query: 74 FRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSR 133
+RAITS+YYRGA+GALLVYDI++ T++N +WL+ELR+ S + I+LVGNKSDL H R
Sbjct: 67 YRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLR 126
Query: 134 EVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATS 193
V EE K A L F+ETSA+ NVE AF ++ +I++ K+L + D A
Sbjct: 127 AVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS--GDSQAP- 183
Query: 194 NCNNLGGGKEIINIDHEVTATKQSSCC 220
LG + +I++ + + CC
Sbjct: 184 ----LGDRRPVIDVSQTPDSESKQGCC 206
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 123/157 (78%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 8 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 67
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 68 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 127
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQ 172
+E + AE GL F+ETSA+ + NVE AF ++ +
Sbjct: 128 PTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTE 164
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 128/168 (76%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DYLFK V++GDS VGKSNLLSRF R+EF L+SK TIGVEFA R I + +K+IKAQIW
Sbjct: 6 DDYDYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIKAQIW 65
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYD+T + TF N +KWL ELR+ + + I+LVGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIMLVGNK 125
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
DL R + + + A+TE L F+ETSA+ NVE AF+ ++ ++
Sbjct: 126 CDLAQLRVIQAVKAQQFADTEDLIFIETSALDATNVETAFINALSNVY 173
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 148/220 (67%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K N + SN LG + E ++ +CC
Sbjct: 175 AKVSKQNQNSPRSNAIALGSAQA----GQEPGPGQKRACC 210
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 148/217 (68%), Gaps = 14/217 (6%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+++ DYLFK V+ GDS VGKSNLL RF +++F DSK TIGVEFA R+I + K+IKAQI
Sbjct: 5 EDDYDYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GA+LVYDIT + +FE+ ++W++E+RE + I+++GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIMIIGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL H R + E G+ LA+ + FME SA NV+ AF Q+I QI+Q +L +
Sbjct: 125 KSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQ-----NLTKQ 179
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTAT--KQSSCC 220
+ S +L G K +D E+T + K+ CC
Sbjct: 180 LQKYDQMS---HLQGEK----LDLEITTSGNKKQGCC 209
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 139/184 (75%), Gaps = 2/184 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
GDS DE DY+FK VM+GDS VGKS LL+RF R+EF++ SK TIGVEF + + + K++
Sbjct: 6 GDS-DEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER++AIT++YYRGA GALL YDIT R +F++ +KWL ELR + + ++
Sbjct: 65 KAQIWDTAGQERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHADNII-VM 123
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL+ R V EE K A+ +GL+F+ETSA+ + NVE AFL +++QI+ T +K
Sbjct: 124 LVGNKSDLSSGRAVPMEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLSQIYATVGKKH 183
Query: 182 LCAK 185
+ A+
Sbjct: 184 IIAE 187
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 142/215 (66%), Gaps = 6/215 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E D+LFK VMIGDS VGK+N+L RF RDEF LDSK TIGVEFA R + + +K+IKAQIW
Sbjct: 3 DEYDFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQIW 62
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALL+YD+T +++N +WL+EL++ S + ++LVGNK
Sbjct: 63 DTAGQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVGNK 122
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI-HQTTIQKSLCAK 185
DL H R V EE K A L F+ETSA+ +V AF ++ +I H+ + +++ A
Sbjct: 123 CDLKHLRAVPTEEAKQFASQNKLLFIETSALDGTDVALAFRNILTEIYHRVSAAENVHAN 182
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ D + + + D K SSCC
Sbjct: 183 LEDSRKPQQGTTISLTPQPGDSDK-----KSSSCC 212
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 149/220 (67%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I +
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEK---- 176
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+K + +N LGG + E + ++ +CC
Sbjct: 177 --VSKQRQNSTRTNAITLGGAQG----GQEPGSGEKRACC 210
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/165 (58%), Positives = 127/165 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DEE D++FK V+IGDS VGKSNLLSRF +D+F D K TIGVEFA R+I +KLIKAQI
Sbjct: 7 DEEHDFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNKLIKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+++IT++YYRGA+GALL+YDIT+ +F N +KWL E+R+ + I+LVGN
Sbjct: 67 WDTAGQERYKSITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIVIMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMI 170
KSDL H R+V +EE + AE + F+E SA+ + NVE +F ++I
Sbjct: 127 KSDLKHLRQVKQEEATLFAENNNIAFIEASALDSSNVELSFYRLI 171
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 148/220 (67%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K + +N LGG + E ++ +CC
Sbjct: 175 AKVSKQRQNSTRTNAITLGGAQA----GQEPGPGEKRACC 210
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 142/225 (63%), Gaps = 13/225 (5%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF DEF ++SK TIGVEFA R I V +K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V +E K A + F ETSA+ + NV+ AF ++I I Q +
Sbjct: 124 IGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQ------M 177
Query: 183 CAKMNDKTATSNCNNLGGGK-------EIINIDHEVTATKQSSCC 220
+K + S NN+G + E K S+CC
Sbjct: 178 VSKHQVDLSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 149/220 (67%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSRAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K +A +N +LG + E ++ +CC
Sbjct: 175 AKVSKQRQNSARTNAISLGSAQA----GQEAGPGEKRACC 210
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 133/177 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE DY+FK VM GDS VGKS LL+RF ++EF + SKPTIG+EF R + + KL+KAQI
Sbjct: 9 DEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVKAQI 68
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER++AIT++YYRGA GALL YDIT++ TF++ +KWL ELR + ++LVGN
Sbjct: 69 WDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGN 128
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
KSDL+ R V E + A+ EGL+F+ETSA+ + NVE AF+ +++Q+++T +K +
Sbjct: 129 KSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHI 185
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 144/218 (66%), Gaps = 4/218 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF LDS+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ ++E+ +WL+EL+E + + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V +E K A L F E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKNIYEMISKHQL 185
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +D+ + + G + + E + ++CC
Sbjct: 186 --ETDDQPSAKPSS--GATISLTPVPQEKKSKNNANCC 219
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 136/215 (63%), Gaps = 22/215 (10%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF +EF ++SK TIGVEFA R I V K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ T+EN WL+ELR+ +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ------- 175
+GNKSDL H R V E K A L F ETSA+ + NV+ AF ++I I+Q
Sbjct: 124 IGNKSDLAHLRAVPTAEAKNFASENELLFTETSALNSENVDQAFRELITAIYQMVSKHQV 183
Query: 176 ---------------TTIQKSLCAKMNDKTATSNC 195
TI + N K+++SNC
Sbjct: 184 DLGDSGNNAAAAPKGPTISLTPTPNENKKSSSSNC 218
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 127/173 (73%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF +EF ++SK TIGVEFA R I V K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+GNKSDL H R V +E K A+ L F ETSA+ + NV+ AF ++I I+Q
Sbjct: 124 IGNKSDLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQ 176
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 135/184 (73%), Gaps = 11/184 (5%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V+IGDS VGKS++LSRF R+EF +DSK TIGVEFA R++ V K IKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWDTA 68
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA+GALLVYDI+++++F N ++WL+EL++ S + I+LVGNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSDL 128
Query: 130 THSREV--------NEEEGKILAETEG---LYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
H R V EE+ K+ TE + F+ETSA+ + NVE AF ++ I+Q
Sbjct: 129 KHLRAVPTAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILTDIYQLVA 188
Query: 179 QKSL 182
K+L
Sbjct: 189 TKAL 192
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 135/193 (69%), Gaps = 3/193 (1%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E DY+FK V++GDSAVGK+ LL RFA+DEF LDSK TIGVEF R + + K +KAQIWD
Sbjct: 21 EIDYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWD 80
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RA+TS+YYRGALGA++VYD+TRRATF++ +W+ ELR + LVGNK+
Sbjct: 81 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADGSTVVALVGNKA 140
Query: 128 DLT-HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
D H REV +E AE +GL+F E SA+ NVE AFL ++ ++ +++L ++
Sbjct: 141 DAPAHRREVPADEAARFAEEQGLFFSEASALTGDNVERAFLALLEEVFAVVSRRAL--EL 198
Query: 187 NDKTATSNCNNLG 199
++ T N + G
Sbjct: 199 DEARRTRNGDGDG 211
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 147/225 (65%), Gaps = 17/225 (7%)
Query: 6 DEECDYLFKA----------VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIR 55
++E D+LFK V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+
Sbjct: 3 NDEYDFLFKGIYLPGPVLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQ 62
Query: 56 VGDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCS 115
V K IKAQIWDTAGQER+RAITS+YYRGA+GALLVYD T++ TF N ++WL+ELRE
Sbjct: 63 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHAD 122
Query: 116 SCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+ I+LVGNK D H R+V + A+ L F+ETSA+ NVE AF ++ +I++
Sbjct: 123 KNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYR 182
Query: 176 TTIQKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K+L + +S+ N L G +++I I A + CC
Sbjct: 183 IVSSKAL------ENGSSSQNPL-GDRKVIEISKTQDADAKQKCC 220
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/225 (50%), Positives = 144/225 (64%), Gaps = 13/225 (5%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF DEF ++SK TIGVEFA R I V +K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V +E + A + F ETSA+ + NV+ AF ++I I Q +
Sbjct: 124 IGNKSDLAHLRAVPTDEARNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQ------M 177
Query: 183 CAKMNDKTATSNCNNLG--GGKEIINI-----DHEVTATKQSSCC 220
+K S NN+G GG + I E K S+CC
Sbjct: 178 VSKHQVDLNGSGSNNVGSNGGPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 136/184 (73%), Gaps = 5/184 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+E +++FK V+IG+S VGKSNLLSRFA++EF DS+ TIGVEF+ R +++ IKAQI
Sbjct: 8 NEAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNGLTIKAQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYD+T+ T+E+ ++WL+EL + M ++LVGN
Sbjct: 68 WDTAGLERYRAITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPHMVVMLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH-----QTTIQK 180
KSDL R V EE K AE +GL F+ETSA+++ NVE AF ++++IH + IQ
Sbjct: 128 KSDLVSERSVPTEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLSEIHRKVSSKKVIQG 187
Query: 181 SLCA 184
S+ A
Sbjct: 188 SISA 191
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 148/216 (68%), Gaps = 5/216 (2%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
Y+++ DY+FK V+IGDSAVGKS L+RFAR+EF DSK TIGVEF + + + +K +KAQ
Sbjct: 7 YNQKIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDNKTVKAQ 66
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RA+TS+YYRGA+GA+LVYD+T+R +F++ +WL ELR + I+L+G
Sbjct: 67 IWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKSIIIMLIG 126
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK DL R V E+ + A+ E L+FMETSA++ NVE AF ++ +I++ +K+L
Sbjct: 127 NKCDLGSLRAVPTEDAEEFAQRENLFFMETSALEATNVETAFWTVLTEIYRIISKKTLAG 186
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
NDK+ N G + I + + +++ CC
Sbjct: 187 --NDKS-DGNPGVFKGTR--ILVPSQAQNSEKKGCC 217
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 146/221 (66%), Gaps = 19/221 (8%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+E DY+FK V+IGDS VGKS LL FAR+ L+SK TIGVEFA R+IR DK++KAQIW
Sbjct: 6 KEYDYVFKVVVIGDSGVGKSQLLMGFARNH-NLESKSTIGVEFATRSIRFEDKVVKAQIW 64
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ S + I+LVGNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 124
Query: 127 SDLTHSREVNEEEGKILAETEGLYFM------ETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+DL H R V E+ K AE E +FM ETSA++ +AF ++ I++ QK
Sbjct: 125 ADLRHLRAVATEDAKAFAEMESTFFMGNIRYGETSALK-----EAFKNVLTDIYRIASQK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINID-HEVTATKQSSCC 220
+L A + + G GK + N D E + SCC
Sbjct: 180 NLSAN------AAQTHLQGQGKVVQNDDVQEPQGKSKRSCC 214
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 144/227 (63%), Gaps = 22/227 (9%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E DY+FK V++GDSAVGK+ LL RF +DEF LDSK TIGVEF R + + K +KAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RA+TS+YYRGALGA++VYDITRR TFEN +W+ ELR + L+GNK+
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 128 DLTHS-REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL---- 182
D+ REV +E AE +GL+F E SA+ NV+ AFL ++ +I +++L
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 183 CAKMNDKTATSNCNNLGGGKEIINID---------HEVTATKQSSCC 220
+M D A GG E++++ E +A K+SS C
Sbjct: 198 ARRMRDGGA--------GGGEVLSLKGTTLDVGSIMETSAMKKSSQC 236
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 131/178 (73%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D +++FK V+IG+S VGKSNLLSRF ++EF DS+ TIGVEF+ R+++V IKAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDIT+ T+E+ ++WL+EL + + ++LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
K+DL R V EE K A+ GL FMETSA+++ NVE AFL+++ IHQ K +
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVT 181
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 131/178 (73%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D +++FK V+IG+S VGKSNLLSRF ++EF DS+ TIGVEF+ R+++V IKAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDIT+ T+E+ ++WL+EL + + ++LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
K+DL R V EE K A+ GL FMETSA+++ NVE AFL+++ IHQ K +
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVT 181
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 128/176 (72%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D + LFK V+IGDS VGK+NL SRF EF L+SK TIGV+FA +N+ + K++KAQI
Sbjct: 5 DPQLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI++ TF N +WL ELRE+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
K DL H R V E+ K+ AE +G+ FMETSA+ NVE+AF Q + I+ ++
Sbjct: 125 KCDLKHLRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSKRP 180
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 141/188 (75%), Gaps = 2/188 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R I VGD +
Sbjct: 1 MG-SAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDAV 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GAL+V+DIT+ T++ ++WL+EL + + + +
Sbjct: 60 VKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIVV 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI-HQTTIQ 179
+LVGNK+DL +REV EE K+ A+ GL F+ETSA+ + NVE AF ++ +I H+ Q
Sbjct: 120 MLVGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQQ 179
Query: 180 KSLCAKMN 187
K ++ N
Sbjct: 180 KQRNSQSN 187
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/181 (55%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + DEE DYLFK V+IGDS VGKSNLLSRF R++F L++K TIGVEFA R++ + K
Sbjct: 1 MNNPRDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKK 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSC-MA 119
IKA IWDTAGQER+RAITS+YYRG LGAL+VYDI + TFEN ++WL+ELR ++
Sbjct: 61 IKATIWDTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDIS 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
I+LVGNK+DL H R V +E + AE + F+ETSA+ + NVE+A ++ I+++
Sbjct: 121 IMLVGNKTDLRHLRAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTAIYKSVST 180
Query: 180 K 180
K
Sbjct: 181 K 181
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 142/225 (63%), Gaps = 13/225 (5%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF DEF ++SK TIGVEFA R I V +K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V +E K A + F +TSA+ + NV+ AF ++I I Q +
Sbjct: 124 IGNKSDLAHLRAVPTDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVAIFQ------M 177
Query: 183 CAKMNDKTATSNCNNLGGGK-------EIINIDHEVTATKQSSCC 220
+K + S NN+G + E K S+CC
Sbjct: 178 VSKHQVDLSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 130/180 (72%), Gaps = 4/180 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++ DYLFK V+IGDS VGKSNLLSR+ ++EF L SK TIGVE A+RN+ + K ++AQI
Sbjct: 12 EDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQI 71
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GA+LVYDI + +F N KW+ ELR+ S ++I+L+GN
Sbjct: 72 WDTAGQERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGN 131
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDA----FLQMINQIHQTTIQKS 181
KSDL H R + GK A G+ FMETSA+ + NV +A F + +++ Q ++KS
Sbjct: 132 KSDLKHLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELEKS 191
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 141/194 (72%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
+ D+LFK V+IGDS VGKSNLL R+ +++F+++S+ TIGVEFA R+I+V D+ ++AQIW
Sbjct: 9 DHYDHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVEDQFVRAQIW 68
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAIT++YYR A+GALLVYDIT+ T++N ++W+ ELRE ++++LVGNK
Sbjct: 69 DTAGQERYRAITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSISVLLVGNK 128
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V+ EE A+ ++F+ETSA+ NVE AF+++I I+QT I++
Sbjct: 129 SDLKSQRAVSFEEANAYAKNNNIHFIETSALDATNVEIAFVKVIQDIYQTQIKEGQDDNN 188
Query: 187 NDKTATSNCNNLGG 200
D+ +N N G
Sbjct: 189 QDQYTQNNDQNNKG 202
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 143/216 (66%), Gaps = 14/216 (6%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV--GDKLIKAQIWD 67
DYLFK V+IGDS VGKSNLLSRF R+EF +SK TIGVEFA R I V K +KAQIWD
Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVCLEGKTVKAQIWD 68
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RAITS+YYRGA+GALLVYDIT+ +++N +KWL+ELR+ S + I LVGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHADSNIVITLVGNKT 128
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL-CAKM 186
DL H R V E + EGL F+ETSA ++ NV+ AF + + ++ +KS A++
Sbjct: 129 DLKHLRSVQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLTDVYHIISKKSCSSAEV 188
Query: 187 NDKTATSNCNNLGGGKEIINID--HEVTATKQSSCC 220
+DK GG II + E + S CC
Sbjct: 189 DDKN---------GGAGIIEVKAISESSKKNPSKCC 215
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 136/198 (68%), Gaps = 2/198 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI + ++E+ +WL+EL+E S + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V EE K A+ L F+E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
Query: 183 CAKMNDKTATSNCNNLGG 200
N++ + GG
Sbjct: 186 --DTNEQGGVNKPTTAGG 201
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 149/221 (67%), Gaps = 9/221 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M ++ ++E D+L+K V++G+S VGKSNLL RF R+EF D + TIGVEFA R+I +K
Sbjct: 1 MANTGEDEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKN 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
I+AQIWDTAGQER+RAIT++YYRGALGAL+VYDIT++++FE+ ++WL EL E +
Sbjct: 61 IRAQIWDTAGQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQ 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+++GNKSDL +REV EEGK LAE +F ETSA+ NVEDAF+ ++ +I+ + +
Sbjct: 121 MIIGNKSDLNQTREVTTEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLLKKIYDESAKV 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTAT-KQSSCC 220
+ + T++ ++ E AT KQ CC
Sbjct: 181 VVDEVKTEAKPTADT--------VVLTHEEPKATEKQQKCC 213
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 141/219 (64%), Gaps = 5/219 (2%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI + T+E+ +WL+EL+E + + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADANIVIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V EE + A L F E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTEEARNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
Query: 183 CAKMNDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
ND SN GG + E + S+CC
Sbjct: 186 --DTND--GGSNKPTTGGPTISLTPAPQEKRSKNNSNCC 220
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 141/218 (64%), Gaps = 3/218 (1%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF DEF ++SK TIGVEFA R I V K +K
Sbjct: 5 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVK 64
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGL 124
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V +E K A+ + F ETSA+ NV+ AF ++I I+Q + +
Sbjct: 125 IGNKSDLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQV 184
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
N+ + T G + E + K ++CC
Sbjct: 185 DLSENNGSGTV---PRGPTISLAPAPSEKSKKKTNNCC 219
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 131/178 (73%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE +++FK V+IG+S VGKSNLLSRF ++EF DS+ TIGVEF+ R +++ + IKAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDIT+ T+E+ ++WL+EL E + ++L+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
KSDL R V EE K AE +GL F+ETSA+ + NVE AF ++ +IH+ K +
Sbjct: 124 KSDLESERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEVV 181
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 144/223 (64%), Gaps = 8/223 (3%)
Query: 1 MGDSYDE---ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVG 57
MGD+ D+ + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + +
Sbjct: 1 MGDNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 58 DKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSC 117
+ +KAQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ ++E+ +WL+EL+E +
Sbjct: 61 GRRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTN 120
Query: 118 MAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTT 177
+ I LVGNKSDL H R V EE K A L F E SA+ + NV+ +F Q++ I++
Sbjct: 121 IVIELVGNKSDLDHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 178 IQKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ L ND+ A G + E S+CC
Sbjct: 181 SKHQL--DTNDQGAQKPS---GPTISLTPAPQEKKGKNNSNCC 218
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 126/173 (72%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF +EF ++SK TIGVEFA R I V K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +T+EN WL EL+E +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+GNKSDL H R V +E K A L F ETSA+ + NV+ AF ++I I+Q
Sbjct: 124 IGNKSDLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQ 176
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 141/188 (75%), Gaps = 2/188 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R I VGD +
Sbjct: 1 MG-SAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAV 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GAL+V+DIT+ T++ +WL+EL + + + +
Sbjct: 60 VKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVV 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI-HQTTIQ 179
+LVGNK+DL +REV EE K+ A+ GL F+ETSA+ + NVE+AF ++ +I ++ Q
Sbjct: 120 MLVGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQ 179
Query: 180 KSLCAKMN 187
K ++ N
Sbjct: 180 KQRSSQSN 187
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 141/219 (64%), Gaps = 2/219 (0%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G+ Y + D+LFK V+IGDS VGKSNLLSRF +EF LDSK TIGVEFA R I V K I
Sbjct: 3 GEDYGYDYDFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKI 62
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RAIT++YYR A+GAL+VYDIT+ +++EN WL EL++ +A+
Sbjct: 63 KAQIWDTAGQERYRAITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVAVG 122
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
L+GNKSDL H R V +E + A+ L F ETSA+ NV++AF +I I+Q +
Sbjct: 123 LIGNKSDLDHKRAVPTDEARNYAQENQLLFTETSALNADNVDEAFRALITAIYQMISKNQ 182
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L +ND + + G + +E ++CC
Sbjct: 183 L--DLNDASGNNANAPKGPTISLTPAPNEKHKKSTNNCC 219
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 146/206 (70%), Gaps = 5/206 (2%)
Query: 15 AVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERF 74
V+ S + KSNLLSRF R+EF L+SK TIGVEFA R+I+ K+IKAQIWDTAGQER+
Sbjct: 21 PVLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERY 80
Query: 75 RAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSRE 134
RAITS+YYRGA+GALLVYDIT++ +F+N ++WL+EL++ + + I+LVGNKSDL H +
Sbjct: 81 RAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKA 140
Query: 135 VNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSN 194
V ++ AE+ GL F+ETSA+ N NVE+AF ++++I++ +K+L +K +TSN
Sbjct: 141 VTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKAL-----EKGSTSN 195
Query: 195 CNNLGGGKEIINIDHEVTATKQSSCC 220
+IN + T+++ CC
Sbjct: 196 FAPNATQTIVINPPADEGKTEKAKCC 221
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 129/174 (74%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLL R+ ++EF L+SK TIGVEFA R+I+ +K IKAQIWDTAGQ+R+R
Sbjct: 2 VLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI++ AT+EN KWL+ELR+ + I+LVGNKSDL H R V
Sbjct: 62 AITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLRHLRNV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
EE K A+ L F+ETSA+ + NVE AF ++ +I++ ++ +DK
Sbjct: 122 PTEEAKNFAQRNNLSFIETSALHSTNVETAFHTILQEIYKNVVRTLGGGAADDK 175
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 122/155 (78%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 62 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMI 170
+E + AE L F+ETSA+ + NVE+AF ++
Sbjct: 122 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 156
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 147/220 (66%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLHQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K + +N LG + E A ++ +CC
Sbjct: 175 TKVSKQRQNSTRTNAIALGSAQA----GQEPGAGQKRACC 210
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 141/225 (62%), Gaps = 13/225 (5%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF DEF ++SK TIGVEFA R I V +K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+GNKSDL H R V +E K A + F TSA+ + NV+ AF ++I I Q +
Sbjct: 124 IGNKSDLAHLRAVPTDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVAIFQ------M 177
Query: 183 CAKMNDKTATSNCNNLGGGK-------EIINIDHEVTATKQSSCC 220
+K + S NN+G + E K S+CC
Sbjct: 178 VSKHQVDLSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/169 (60%), Positives = 129/169 (76%), Gaps = 2/169 (1%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DYL+K V+IGDS VGKSNLLSRF R+EF L++K TIGVEFA R I K IKAQIW
Sbjct: 9 EDYDYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKAQIW 68
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSC--MAIVLVG 124
DTAGQER+RAITS+YYRGA+GALLVYDI ++AT+++ ++WL ELRE + I+LVG
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIMLVG 128
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
NKSDL H REV+ +E K AE L F+ETSA+ + NV+ AF ++ QI
Sbjct: 129 NKSDLRHLREVSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILTQI 177
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 131/177 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE +++FK V+IG+S VGKSNLLSRF ++EF DS+ TIGVEF+ R I++ +IKAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLIIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDIT+ T+E+ ++WL+EL + + ++LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
K+DL R V EE K AE GL F+ETSA+++ NVE AF ++ +IH+ K +
Sbjct: 124 KTDLGSERSVPNEEAKDFAEKNGLLFLETSALESTNVETAFQNVLGEIHRKVSSKKV 180
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 128/171 (74%), Gaps = 3/171 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M DEE DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R ++V +
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYD+T+ TFE WL+ELR+ S + I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVI 118
Query: 121 VLVGNKSDLTHSREVNEEEGK-ILAETEGLYFMETSAMQNLNVEDAFLQMI 170
+L+GNK+DL HSR V E+ + + + L F+ETSA++ NVE AF ++
Sbjct: 119 MLIGNKTDLKHSRAVRTEDAQGFMLRKKALSFIETSALKATNVEKAFQTIL 169
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 144/206 (69%), Gaps = 9/206 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I +
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEK---- 176
Query: 181 SLCAKMNDKTATSNCNNLG---GGKE 203
+K + +N LG GG+E
Sbjct: 177 --VSKQRQNSTRTNAITLGSAQGGQE 200
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 126/177 (71%), Gaps = 4/177 (2%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DY+FK V+IGDS VGK+ LL RF RDEF LDSK TIG+EF R + + K +KAQIWDTA
Sbjct: 12 DYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAGKRVKAQIWDTA 71
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RA+TS+YYRGALGA+LVYD+TRR +FE+ +W+ ELR + +VL+GNK+DL
Sbjct: 72 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSIVVVLIGNKADL 131
Query: 130 THS----REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+ R V+ EE AE +GL+F E SA+ NVE AFL ++ +IH ++ L
Sbjct: 132 AVAAVGRRAVDVEEATAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRRPL 188
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 126/173 (72%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF +EF ++SK TIGVEFA R I + K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +T+EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLSELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+GNKSDL H R V +E K A L F ETSA+ + NV+ AF ++I I+Q
Sbjct: 124 IGNKSDLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQ 176
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 128/173 (73%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF ++F ++SK TIGVEFA R I V K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+GNKSDL H R V +E K A+ L F ETSA+++ NV+ AF ++I I+Q
Sbjct: 124 IGNKSDLDHLRAVPTDEAKNFAQENQLLFTETSALKSENVDLAFRELITAIYQ 176
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 147/220 (66%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K + +N LG + E ++ +CC
Sbjct: 175 AKVSKQRQNSIRTNAITLGSAQP----GQEPGPGEKRACC 210
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 147/220 (66%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 5 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 64
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 65 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 124
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 125 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 178
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K + +N LG + E ++ +CC
Sbjct: 179 AKVSKQRQNSIRTNAITLGSAQA----GQEPGPGEKRACC 214
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 126/173 (72%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF DEF ++SK TIGVEFA R I V K +K
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADENVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+GNKSDL H R V +E K A+ + F ETSA+ NV+ AF ++I I+Q
Sbjct: 124 IGNKSDLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQ 176
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 147/220 (66%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K + SN LG + E ++ +CC
Sbjct: 175 AKVSKQIQNSPRSNAIALGSAQA----GQEPGPGQKRACC 210
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 130/179 (72%), Gaps = 2/179 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+ E DY+FK V++GDSAVGK+ LL+RF RDEF LDSK TIGVEF R + + K +KAQI
Sbjct: 27 EAEIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKAQI 86
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFC-SSCMAIVLVG 124
WDTAGQER+RA+TS+YYRGALGA++VYD+TRRATFE+ +W+ ELR S + L+G
Sbjct: 87 WDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVALIG 146
Query: 125 NKSDLTHS-REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
NK+D+ REV +E LAE +GL+F E SA+ NVE AFL ++ ++ +++L
Sbjct: 147 NKADMPAGRREVAADEAARLAEEQGLFFSEASALTGDNVERAFLTLLEEVFAVVSRRAL 205
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 147/220 (66%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGNEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K + +N LG + E ++ +CC
Sbjct: 175 AKVSKQRQNSTRTNAITLGSAQA----GQEPGPGEKRACC 210
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 132/176 (75%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
EE DY+FK V+IGDSAVGK+ LL RF +DEF +DSK TIG+EF R + +G K +KAQIW
Sbjct: 2 EEEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIW 61
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYD+T R +F + +WL +LR + + ++L+GNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNK 121
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+DL+H+R V +E AE +GL+F E SA+ NVE+AFL ++ +IH ++SL
Sbjct: 122 ADLSHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSL 177
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 136/193 (70%), Gaps = 2/193 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D LFK V+IGDS VGK+NL SRF DEF L+SK TIGV+FA +N+++ K++KAQI
Sbjct: 5 DSNIGLLFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GA+LVYDI++ TF N KWL EL+E+ S + I+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLIGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL H R V E+ A+ +G+ FMETSA+ ++NVE+AF Q I I+ I K
Sbjct: 125 KCDLKHLRCVLTEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYY-LISKHPSFN 183
Query: 186 MNDKTATSNCNNL 198
MN+ T NNL
Sbjct: 184 MNE-TNIIPTNNL 195
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 147/220 (66%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K + +N LG + E ++ +CC
Sbjct: 175 AKVSKQRQNSIRTNAITLGSAQA----GQEPGPGEKRACC 210
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 136/202 (67%), Gaps = 6/202 (2%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI + ++E+ +WL+EL+E + + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V EE K A L F E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
Query: 183 CAKMNDKTATSNCNNLGGGKEI 204
+ ND T N GG I
Sbjct: 186 --ENNDSKQT----NTAGGPTI 201
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 141/220 (64%), Gaps = 6/220 (2%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +
Sbjct: 5 ADDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRV 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RAITS+YYRGA+GAL+VYDI + ++E+ +WL+EL+E + + I
Sbjct: 65 KAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIE 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL H R V +E K A L F E SA+ + NV+ +F Q++ I++ +
Sbjct: 125 LVGNKSDLDHLRAVPTDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQ 184
Query: 182 LCAKMNDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
L + A SN + G + E + S+CC
Sbjct: 185 L-----ENNADSNKQSTSGPTISLTPAPKEKNSKSNSNCC 219
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 124/166 (74%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E D+L K V+IGDS VGK+NLLSRFARD+F DSK TIGVEFA + + + K +KAQIWD
Sbjct: 5 EPDFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWD 64
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RAITS+YYRGA+GALL+YDIT TF + +WL+ELRE S + ++LVGNKS
Sbjct: 65 TAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKS 124
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
DL R V+ E+G ++ E L F+ETSA NV++AF +I +I
Sbjct: 125 DLQELRAVSTEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEI 170
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 147/220 (66%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K ++ +N LG + E ++ +CC
Sbjct: 175 TKVSKQRQNSSRTNAITLGSAQA----GQEPGPGEKRACC 210
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 121/160 (75%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I V K +KAQIWDTAGQER+R
Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI++ AT+ N +WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 62 AITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
EE K + L F+ETSA+ NVE AF ++ +++
Sbjct: 122 PTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYR 161
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 126/173 (72%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF DEF ++SK TIGVEFA R I V +K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+GNKSDL H R V +E K A + F ETSA+ + NV+ AF ++I I Q
Sbjct: 124 IGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVAIFQ 176
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 122/155 (78%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAGQER+R
Sbjct: 58 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 117
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 118 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 177
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMI 170
+E + AE L F+ETSA+ + NVE+AF ++
Sbjct: 178 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 212
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 137/197 (69%), Gaps = 2/197 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQ 64
D+ DYLFK V+IGDS VGKSNLL RF + F+LDSK TIGVEFA + + + + K+ KAQ
Sbjct: 4 DQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKAQ 63
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RAITS+YYRGA+GA++VYDI + +F N KWL EL ++ S + I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITICLVG 123
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI-HQTTIQKSLC 183
NKSDLTH REVN+E+G+ A L F ETS + + NV+ AF +++++I + T+ +
Sbjct: 124 NKSDLTHLREVNKEDGEAFARENDLLFFETSCLNSENVDVAFKELLSKIGDKNTMYDNTG 183
Query: 184 AKMNDKTATSNCNNLGG 200
+ND N LG
Sbjct: 184 FSLNDAQVPKNAIVLGA 200
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 130/181 (71%), Gaps = 1/181 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + DEE DYLFK V++GDS VGKSNLLSRF R+ F L++K TIGVEFA R++ + K
Sbjct: 1 MSNPRDEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKK 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCS-SCMA 119
IKA IWDTAGQER+RAIT +YYRGALG L+VYDI + TF+N +WL+ELR S ++
Sbjct: 61 IKATIWDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNIS 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
I+LVGNK+DL H R V +E I A+ + F+ETSA+ + NVE+A ++ I++T
Sbjct: 121 IMLVGNKTDLRHLRAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLTDIYKTVST 180
Query: 180 K 180
K
Sbjct: 181 K 181
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 148/220 (67%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRSEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV +E ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K ++ +N LG + E ++ +CC
Sbjct: 175 AKVSKQRQNSSRTNAITLGSAQP----GQEPGPGEKRACC 210
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 145/214 (67%), Gaps = 7/214 (3%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
EE D+L+K V++G+S VGKSNLL RF R+EF D + TIGVEFA R+I DK I+AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAIT++YYRGALGAL+VYDIT++ +FE+ +KWL EL E + +++GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL+ +REV EG+ LA+ +F ETSA+ NVE+AF+ ++ +I+ + KS+ +
Sbjct: 125 CDLSQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDS-SKSVDGEQ 183
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SN N + E I++ + ++ CC
Sbjct: 184 ------SNTNEIKPATEPIDLGSQNNKPEEKKCC 211
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 132/173 (76%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 130/178 (73%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D +++FK V+IG+S VGKSNLLSRF ++EF DS+ TIGVEF+ R+++V IKAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDIT+ T+E+ ++WL+EL + + ++LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLC 183
K+DL R V EE K A+ L FMETSA+++ NVE AFL+++ IHQ K +
Sbjct: 124 KNDLATVRTVPTEEAKDFADANDLLFMETSALESTNVESAFLEVLTAIHQKVASKEVT 181
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 124/172 (72%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YLFK V+IGDS VGKSNLLSRF R+EF L+S+ TIGVEFA R + + K +K
Sbjct: 5 DDYTYDYEYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVK 64
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GALLVYDI++ ++EN KWL+EL+E + I L
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIEL 124
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
VGNKSDL H R V +E K + L F E SA+ NV+ +F Q++ IH
Sbjct: 125 VGNKSDLDHLRAVPTDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKSIH 176
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/223 (47%), Positives = 143/223 (64%), Gaps = 8/223 (3%)
Query: 1 MGDSYDE---ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVG 57
MGD+ D+ + +YL+K V+IGD VGKSNLLSRF RDEF L+S+ TIGVEFA R + +
Sbjct: 1 MGDNTDDYSYDYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 58 DKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSC 117
+ +KAQIWDTAGQER+RAITS+YYRGA+GAL+VYDI + ++E+ +WL+EL+E +
Sbjct: 61 GRRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTN 120
Query: 118 MAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTT 177
+ I LVGNKSDL H R V EE K+ A L F E SA+ + NV+ +F Q++ I++
Sbjct: 121 IVIELVGNKSDLDHLRAVPTEEAKLFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMI 180
Query: 178 IQKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ L ND+ A G + E S+CC
Sbjct: 181 SKHQL--DTNDQGAQKPS---GPTISLTPAPQEKKGKNNSNCC 218
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 136/202 (67%), Gaps = 6/202 (2%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI + ++E+ +WL+EL+E + + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V EE K A L F E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
Query: 183 CAKMNDKTATSNCNNLGGGKEI 204
+ ND T N GG I
Sbjct: 186 --ENNDSKQT----NTAGGPTI 201
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 145/214 (67%), Gaps = 7/214 (3%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
EE D+L+K V++G+S VGKSNLL RF R+EF D + TIGVEFA R+I DK I+AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAIT++YYRGALGAL+VYDIT++ +FE+ +KWL EL E + +++GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL+ +REV EG+ LA+ +F ETSA+ NVE+AF+ ++ +I+ + KS+ +
Sbjct: 125 CDLSQTREVQTTEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDS-SKSVDGEQ 183
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
SN N + E I++ + ++ CC
Sbjct: 184 ------SNTNEIKPATEPIDLGSQNNKPEEKKCC 211
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 121/160 (75%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I V K +KAQIWDTAGQER+R
Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI++ AT+ N +WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 62 AITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
EE K + L F+ETSA+ NVE AF ++ +++
Sbjct: 122 PTEEAKNFSTENELSFIETSALDASNVESAFQTILTDVYR 161
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 149/220 (67%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +++ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGTEDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K ++ S+ LG + E + ++ +CC
Sbjct: 175 AKVSKQRQNSSRSSAITLGSAQA----GQEPGSGEKRTCC 210
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 151/220 (68%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV +E ++ AE GL F+ETSA+ + NVE AF ++ +I T + K
Sbjct: 121 MLVGNKSDLSQAREVPTDEARMFAENNGLLFIETSALDSTNVELAFETVLKEIF-TKVSK 179
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ N + +N G+E+ +++ + +CC
Sbjct: 180 Q--RQNNSRANAVTLSNAQPGQELGSVERK-------ACC 210
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 131/173 (75%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ DE+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+LVGNKSDL+ +REV EE + AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEI 173
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 136/191 (71%), Gaps = 16/191 (8%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + +D+ DYLFK V+IGDS VGKSN+LSRF R+EF ++SK TIGVEFA R+I + K+
Sbjct: 1 MSNEHDD-YDYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIEKKV 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRA---------------TFENTKK 105
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYD+T++ TF + +K
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFADVEK 119
Query: 106 WLRELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDA 165
WL ELR+ S + I+L GNK DL H R V ++ +I A E L F+ETSA+ ++N++ A
Sbjct: 120 WLAELRDHADSKIVIMLTGNKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNIDAA 179
Query: 166 FLQMINQIHQT 176
F ++++ IH+
Sbjct: 180 FQKVLSVIHEV 190
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 148/220 (67%), Gaps = 10/220 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL+ +REV +E ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------ 174
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ +K + +N LG + E+ ++ +CC
Sbjct: 175 AKVSKQRQNSIRTNAITLGSAQA----GQELGPGEKRACC 210
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 131/173 (75%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ DE+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+LVGNKSDL+ +REV EE + AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEI 173
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE +YLFK V+IGDSAVGKSNLL+RF R+EF +K TIGV+F ++I + +K+I AQ
Sbjct: 3 EEESEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQC 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS YYRGA+GA++VYDIT + +F+N +WL ELRE S + I++VGN
Sbjct: 63 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
KSDL SREV +E K AE+ + F+ETSA+ + NV AF ++ I
Sbjct: 123 KSDLEMSREVPTKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDI 170
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 138/219 (63%), Gaps = 3/219 (1%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
D Y + +YLFK V+IGDS+VGK+NLLSRF RDEF DS+ TIGVEFA R + + K I
Sbjct: 5 ADDYSYDYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRI 64
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIV 121
KAQIWDTAGQER+RAIT++YYRGA+GAL+VYDI+ ++E+ +WL+E++E + + I
Sbjct: 65 KAQIWDTAGQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIA 124
Query: 122 LVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
LVGNKSDL H R V EE + A L F E SA+ NVE F Q+I I+ ++
Sbjct: 125 LVGNKSDLEHLRAVPTEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKSIYDMVSKRK 184
Query: 182 LCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D+ +N + + + +K S+CC
Sbjct: 185 FDM---DENGVANKDLNSKTITLTPAPKDKKVSKNSNCC 220
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 136/205 (66%), Gaps = 13/205 (6%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E DY+FK V++GDSAVGK+ LL RF +DEF LDSK TIGVEF R + + K +KAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RA+TS+YYRGALGA++VYDITRR TFEN +W+ ELR + L+GNK+
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 128 DLTHS-REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL---- 182
D+ REV +E AE +GL+F E SA+ NV+ AFL ++ +I +++L
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 183 CAKMNDKTATSNCNNLGGGKEIINI 207
+M D A GG +++++
Sbjct: 198 ARRMRDGGA--------GGVQVLSL 214
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 131/173 (75%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ DE+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGKDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+LVGNKSDL+ +REV EE + AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEI 173
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 132/173 (76%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+LVGNKSDL+ +REV +E ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 132/173 (76%), Gaps = 4/173 (2%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
DSY+ ++FK V+IG+S VGKSNLLSRF ++EFR DS+ TIGVEF+ R +++ + +IK
Sbjct: 5 DSYN----FVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFIIK 60
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAG ER+RAITS+YYRGA+GALLVYDI++ T+E+ ++WL+EL + + ++L
Sbjct: 61 AQIWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVML 120
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
VGNKSDL R V EE + A+ +GL FMETSA+ + NVE AF +++ IH+
Sbjct: 121 VGNKSDLQSQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAIHK 173
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 116/140 (82%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE+ DYLFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVLKAQI 66
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ + + ++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 126 KSDLTHSREVNEEEGKILAE 145
K+DL H R V+ EE AE
Sbjct: 127 KADLRHLRAVSTEETTNFAE 146
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 144/214 (67%), Gaps = 7/214 (3%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
EE D+L+K V++G+S VGKSNLL RF R+EF D + TIGVEFA R+I DK I+AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAIT++YYRGALGAL+VYDIT++ +FE+ +KWL EL E + +++GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
DL +REV EG+ LA+ +F ETSA+ NVE+AF+ ++ +I+ + +K
Sbjct: 125 CDLNQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDS------SKS 178
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D +SN N + E I++ + ++ CC
Sbjct: 179 VDGEQSSN-NEIKPATEPIDLGSQNNKPEEKKCC 211
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 131/173 (75%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ DE+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+KAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+LVGNKSDL+ +REV EE + AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 130/170 (76%), Gaps = 1/170 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQI 65
EE D+LFK V+IGDS VGKSNLLSRF ++EF L+SK TIGVEFA ++ + + + +K QI
Sbjct: 8 EEYDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENGQSVKVQI 67
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAIT++YYRGA+GALLVYDIT+ TFE+ +WL+EL ++ S + I+LVGN
Sbjct: 68 WDTAGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAESGIVILLVGN 127
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
K+DL REV EE A + L F+ETSA+ + NV++AF +I QIH+
Sbjct: 128 KTDLHKLREVKREEAAEFASLKNLAFIETSALVSSNVDEAFDLLIQQIHK 177
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 119/152 (78%), Gaps = 1/152 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG + D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MG-TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFM 152
+LVGNKSDL H R V +E + AE L F+
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAEKNNLSFI 151
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 123/156 (78%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V +K +KAQIWDTAGQER+R
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 60
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI + T+EN ++WL EL++ + + I+LVGNKSDL H R V
Sbjct: 61 AITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAV 120
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMIN 171
+E + AE GL F+ETSA+ + NVE AF +++
Sbjct: 121 PTDEARSFAERNGLSFLETSALDSTNVETAFHNILS 156
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 127/170 (74%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ D L+K V+IGDS VGK+N+L++F R EF DSK TIGVEFA +NI + DK +KAQIW
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIW 65
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GA+++YDIT+ TFEN KW++EL+E + I++VGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNK 125
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQT 176
+D H R+V + A+ G+ F+ETSA NVEDAF ++ QI+++
Sbjct: 126 TDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYKS 175
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 129/169 (76%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+ +++FK V+IG+S VGKSNLLSRF ++EF DS+ TIGVEF+ R +R+ + IKAQI
Sbjct: 4 DDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDI++ T+E+ ++WL+EL + + ++LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
KSDL + R V +E + AE +GL FMETSA+ + NVE AF +++ IH
Sbjct: 124 KSDLENLRTVPTDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTAIH 172
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 134/183 (73%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M +E +LFK V+IGDS+VGKSN+LSRF + +F DS+PTIGVEFA R++ K+
Sbjct: 1 MDKPPQQEEKHLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKI 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
I+AQIWDT GQER+++ITS+YYRGA+GA+L+YDIT++ TFEN +KW++EL+E+ + +
Sbjct: 61 IQAQIWDTCGQERYKSITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVA 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNK+DL R+V ++ AE + FME SA NV+ AF ++IN+I+Q ++
Sbjct: 121 MLIGNKADLKAQRKVPSDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLINEIYQLINKQ 180
Query: 181 SLC 183
SL
Sbjct: 181 SLA 183
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 124/160 (77%)
Query: 12 LFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQ 71
L V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V +K +KAQIWDTAGQ
Sbjct: 17 LHPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQ 76
Query: 72 ERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTH 131
ER+RAITS+YYRGA+GALLVYDI + T+EN ++WL EL++ + + I+LVGNKSDL H
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLRH 136
Query: 132 SREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMIN 171
R V +E + AE GL F+ETSA+ + NVE AF +++
Sbjct: 137 LRAVPTDEARSFAEKNGLSFLETSALDSTNVEMAFHNILS 176
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLL R+ ++EF L+SK TIGVEFA ++I+ +K IKAQIWDTAGQ+R+R
Sbjct: 2 VLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
A+TS+ YRGA+GALLVYDI++ T+EN KWL+ELR+ + I+LVGNKSDL H R V
Sbjct: 62 AVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLRHLRNV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
EE K A+ L F+ETSA Q+ NVE AF ++ +I++ ++ + + + K++
Sbjct: 122 PTEEAKSFAQRNNLSFIETSASQSTNVESAFNTILQEIYKNVVRNTGVSGDDSKSSKPE- 180
Query: 196 NNLGGGKEIINIDH 209
GG+ ++N+D
Sbjct: 181 ----GGEIVVNVDE 190
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 143/218 (65%), Gaps = 20/218 (9%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IK+QIWDTAGQER+R
Sbjct: 20 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERYR 79
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYD+++ T+EN +WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 80 AITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAV 139
Query: 136 NEEEGKILAETE---------GLYFMETSAMQNLNVEDAF----LQMINQIHQTTIQKSL 182
EE K A + L F+ETSA+ NVE AF ++ +I + K+L
Sbjct: 140 PTEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQNILTDLLAEIFRIVSSKAL 199
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ S+ N L G ++++ I + K+ CC
Sbjct: 200 ------ESGDSSANQL-GDRKVVEITKTPDSEKKQGCC 230
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 132/173 (76%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +++ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNGKEDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+LVGNKSDL+ +REV +E ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 121 MLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 128/180 (71%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI + ++E+ +WL+EL+E + + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V EE + A L F E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 128/170 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE +++FK V+IG+S VGKSNLLSRF ++EF DS+ TIGVEF+ R +++ IKAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDIT+ T+E+ ++WL+EL + M ++LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
K+DL R V EE K A+ GL F+ETSA+++ NVE AF ++ +IH+
Sbjct: 124 KTDLESERSVPSEEAKDFADKNGLMFLETSALESTNVEAAFNGVLAEIHR 173
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 128/180 (71%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI + ++E+ +WL+EL+E + + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V EE + A L F E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 128/180 (71%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
D Y + +YL+K V+IGDS VGKSNLLSRF RDEF L+S+ TIGVEFA R + + K +K
Sbjct: 6 DDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVK 65
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGALGAL+VYDI + ++E+ +WL+EL+E + + I L
Sbjct: 66 AQIWDTAGQERYRAITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADANIVIEL 125
Query: 123 VGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
VGNKSDL H R V +E + A L F E SA+ + NV+ +F Q++ I++ + L
Sbjct: 126 VGNKSDLDHLRAVPTDEARNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Query: 1 MGDSYDEEC-DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDK 59
M + DEE DYLFK VMIGDS VGKSNLL R+ + +F ++SK TIGVEFA ++I+ DK
Sbjct: 1 MATTRDEEVYDYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDK 60
Query: 60 -LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCM 118
++KAQIWDTAGQER+RAIT++YYRGA+GALLVYD+T +F++ WL+EL+++ S +
Sbjct: 61 KVVKAQIWDTAGQERYRAITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNI 120
Query: 119 AIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
I+LVGNK+DL REV +EE A+ L F+ETSA+ NV+ AF ++IN+I++
Sbjct: 121 VILLVGNKTDLKDKREVRKEEAAAYADQHSLAFIETSALDCSNVDLAFDRIINEIYK 177
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+LVGNKSDL H R V +E + A +T +Q + F +I++ QK
Sbjct: 120 MLVGNKSDLRHLRAVPTDEARAFAGNNHPKKTKTPYVQAFGISALFSFSYTEIYRIVSQK 179
Query: 181 SLCAK-MNDKTATSNC 195
+ + ND++ +N
Sbjct: 180 QIAERSANDESPGNNV 195
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 125/169 (73%), Gaps = 1/169 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQ 64
D+ DYLFK V+IGDS VGKSNLL RF + F+LDSK TIGVEFA +N+ + + K+ KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQ 63
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RAITS+YYRGA GA++VYDI + +F N +WL EL E+ + M I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVG 123
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
NKSDLTH REV E+G+ A++ L F ETS + N N++ F +++N I
Sbjct: 124 NKSDLTHLREVTYEDGERYAKSNNLIFFETSCLSNENIDTTFTELLNLI 172
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 128/170 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE +++FK V+IG+S VGKSNLLSRF ++EF DS+ TIGVEF+ R +++ IKAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDI++ T+E+ ++WL+EL + + ++LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
KSDL R V E+ K AE GL F ETSA++++NVE AF ++ +IH+
Sbjct: 124 KSDLAAVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHK 173
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 130/170 (76%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S+ E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G +KA
Sbjct: 2 SHMEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 61
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + ++LV
Sbjct: 62 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 121
Query: 124 GNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
GNKSDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 122 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 171
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 130/183 (71%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE DYLFK V+IGDSAVGKSNLL+RF R+EF +K TIGV+F ++I + K+I AQ
Sbjct: 3 EEENDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQC 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS YYRGALGA++VYDIT + +F+N +WL ELRE + +++VGN
Sbjct: 63 WDTAGQERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
KSDL SREV+ E + AE + F+ETSA+ + NV +F +++ I+ QK
Sbjct: 123 KSDLESSREVSTREAQSFAEANKISFLETSALNSTNVNLSFEKLLTDIYNQFGQKKAQVV 182
Query: 186 MND 188
M+D
Sbjct: 183 MDD 185
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 128/185 (69%), Gaps = 6/185 (3%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+++ G K IKAQIWDTAGQER+R
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYR 60
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI++ +T+EN +WL ELR+ + ++L+GNK DL H R V
Sbjct: 61 AITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIGNKCDLRHLRMV 120
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
+E + A E L+F ETSA+ NV++AF+Q++ K TATSN
Sbjct: 121 PTDEAREFAMREKLFFTETSALDATNVDEAFVQVLKDAGHNVATKF------TSTATSNV 174
Query: 196 NNLGG 200
G
Sbjct: 175 TTSNG 179
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 142/215 (66%), Gaps = 8/215 (3%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
D+LFK V+IGDS VGKS L+SRF +D+F ++ +PTIGVEF+ + I++ DK+IKAQIWDTA
Sbjct: 11 DFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTA 70
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RAITS+YYRGA GAL+V+DIT++ +FEN KW +EL+E + +L+GNK DL
Sbjct: 71 GQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDL 130
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI----QKSLCAK 185
R ++++ A+ + ++ETSA+ + NVE AF Q+I I+ +TI Q+ AK
Sbjct: 131 ADQRNISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIYDSTISGNTQRKSIAK 190
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
T + N K+ + + + SCC
Sbjct: 191 FGKNIQTLSLENKLKNKD----QKQESEDNKKSCC 221
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 127/170 (74%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ D L+K V+IGDS VGK+N+L++F R EF DSK TIGVEFA +N+ + DK IKAQIW
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIW 65
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAITS+YYRGA+GA+++YDIT+ TFEN KW++EL+E + I++VGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNK 125
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQT 176
+D H R+V + A+ G+ F+ETSA NVEDAF ++ QI+++
Sbjct: 126 TDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYKS 175
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 128/169 (75%), Gaps = 1/169 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQ 64
D+ DYLFK V+IGDS VGKSNLL RF + F+LDSK TIGVEFA +N+ + + K+ KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKAQ 63
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RAITS+YYRGA+GA++VYDI +A+F + KWL EL ++ + + I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITICLVG 123
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
NKSDLTH REV +E+G+ A L F ETS + + NV+ AF +++++I
Sbjct: 124 NKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSKI 172
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 128/198 (64%), Gaps = 25/198 (12%)
Query: 10 DYLFKAVMIGDSAVGKS-------------------------NLLSRFARDEFRLDSKPT 44
DYLFK V+IGDS VGKS NLLSRF R+EF L++K T
Sbjct: 8 DYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETKST 67
Query: 45 IGVEFAYRNIRVGDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTK 104
IGVEFA R+I V K +KAQIWDTAGQER+RAIT++YYRGA+GALLVYDI + T+ +
Sbjct: 68 IGVEFATRSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHGTYVDVT 127
Query: 105 KWLRELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVED 164
+WL+ELR+ S + I+LVGNKSDL H R V +E K A GL F+ETSA+ NVE
Sbjct: 128 RWLKELRDHADSNIVIMLVGNKSDLKHLRAVPTDEAKTFATENGLSFIETSALDASNVES 187
Query: 165 AFLQMINQIHQTTIQKSL 182
AF ++ I++ KSL
Sbjct: 188 AFQTILTDIYRIVSSKSL 205
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 123/168 (73%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
+ DYLFK V+IGDS VGKSNLLSRF DEF ++SK TIGVEFA R I V +K IKAQIWD
Sbjct: 6 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 65
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAG ER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L+GNKS
Sbjct: 66 TAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 125
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
DL H R V +E K A + F ETSA+ + NV+ AF ++I I Q
Sbjct: 126 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQ 173
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 132/185 (71%), Gaps = 1/185 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
+LFK V+IG S G+SNLLSRF R+EF LDSK T G++FA R+I+V K IKAQIWDTAG
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAG 60
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QER RA TS+YYR ALGALLV+DI + T+EN ++WL+E R+ S + I+LV NKSDL
Sbjct: 61 QERCRATTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLVRNKSDLC 120
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM-NDK 189
H R V +E + AE GL F+E+SA+ NVE AF ++ +I++T QK + + ND
Sbjct: 121 HLRAVPTDEARAFAEKNGLPFIESSALHWTNVEAAFQTILTEIYRTVSQKQISDRRENDM 180
Query: 190 TATSN 194
+ +SN
Sbjct: 181 SPSSN 185
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 126/170 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+EE +YLFK V+IGDSAVGKSNLL+RF R+EF +K TIGV+F ++I + +K I AQ
Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQC 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS YYRGA+GA++VYDIT + +F+N +WL ELRE + I++VGN
Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
KSDL SREV +E + AE+ + F+ETSA+ + NV +F +++ I+
Sbjct: 124 KSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYH 173
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 125/161 (77%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+E+ DYLFK V+IGDS VGK+N+LSRF +DEF ++SKPTIGVEFA + + +KLIKAQI
Sbjct: 5 EEDYDYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQE++RAIT++YYRGA+GAL ++DIT++ TF+N +KWL EL+E + I+LVGN
Sbjct: 65 WDTAGQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAF 166
K DL +R V E+ AE L ++ETSA+ + NV++AF
Sbjct: 125 KCDLNENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAF 165
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 128/167 (76%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G +KAQIW
Sbjct: 20 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 79
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAG ER+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + ++LVGNK
Sbjct: 80 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 139
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
SDL+ +REV EE ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 140 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 186
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 113/140 (80%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAE 145
KSDL H R V +E + AE
Sbjct: 125 KSDLRHLRAVPTDEARAFAE 144
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 113/140 (80%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAE 145
KSDL H R V +E + AE
Sbjct: 125 KSDLRHLRAVPTDEARAFAE 144
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 113/140 (80%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAE 145
KSDL H R V +E + AE
Sbjct: 125 KSDLRHLRAVPTDEARAFAE 144
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 128/180 (71%), Gaps = 6/180 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ Y YLFK V+IG+ VGKSNLLSRF R+EF L SKPTIGVEFA + I V K
Sbjct: 1 MGNEYY----YLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKA 56
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+K QIWDTAG ERFR SSYYRGALGALLVYDI++ T+E+ ++WL+ LR+ + + I
Sbjct: 57 VKVQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVI 116
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
LVGNKSDL+H+ V +E KI AE + F+ETSA+ N NVE AF ++ +I++ +K
Sbjct: 117 TLVGNKSDLSHA--VPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 174
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/165 (58%), Positives = 122/165 (73%), Gaps = 1/165 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQIWDT 68
DYLFK V+IGDS VGKSNLL RF + F+LDSK TIGVEFA +N+ + + K KAQIWDT
Sbjct: 8 DYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQIWDT 67
Query: 69 AGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSD 128
AGQER+RAITS+YYRGA GA++VYDI + +F N +WL EL E+ M I LVGNKSD
Sbjct: 68 AGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALVGNKSD 127
Query: 129 LTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
LTH REV+ E+G+ A + L F ETS + N N++ AF ++++ I
Sbjct: 128 LTHLREVSSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSSI 172
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 134/183 (73%), Gaps = 8/183 (4%)
Query: 39 LDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRA 98
L+SK TIGVEFA R+I V DK++KAQIWDTAGQER+RAITS+YYRGA+GAL+VYD+TR
Sbjct: 3 LESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHV 62
Query: 99 TFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQ 158
TFEN ++W+REL++ + + I+LVGNK+DL H R V+ E+ K AE E +FMETSA++
Sbjct: 63 TFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALE 122
Query: 159 NLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNCNNLG-GGKEIINIDHEVTATKQS 217
++NVE+AF +++ QI+ +K+L +D A + GGK+ +V+A K+S
Sbjct: 123 SMNVENAFTEVLTQIYHVVSKKALDIG-DDPAAPPKGQTINVGGKD------DVSAVKKS 175
Query: 218 SCC 220
+CC
Sbjct: 176 ACC 178
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 128/170 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE ++++K V+IG+S VGKSNLLSRF ++EF DS+ TIGVEF+ R +++ IKAQI
Sbjct: 4 DESYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDI++ T+E+T++WL+EL E + ++LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
K DL R V EE + AE +G+ FMETSA+ + NVE AF ++++ I +
Sbjct: 124 KRDLDTLRTVPSEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSAIQK 173
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 130/175 (74%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+E+ DYLFK V+IGDSAVGKSNLL+RF R+EF +K TIGV+F ++I + +K+I AQ
Sbjct: 4 EEDNDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQC 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFRA+TS YYRGA+GA++VYDIT + +F+N +WL ELRE + I++VGN
Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
KSDL +REV+ +E + A++ + F+ETSA+ + NV AF +++ I+ QK
Sbjct: 124 KSDLDSAREVSTQEAQSFAQSHKISFLETSALNSSNVNLAFERLLTDIYHHFGQK 178
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 128/169 (75%)
Query: 12 LFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQ 71
+FK VM+GDS VGKS LL+RF ++EF + SKPTIGVEF R + + KL+KAQIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 72 ERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTH 131
ER++AIT++YYRGA ALL YDIT++ TF++ +KWL ELR + ++LVGNKSDL+
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVGNKSDLSS 120
Query: 132 SREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
R V E + A+ EGL+F+ETSA+ + NVE AF+ +++Q+++T +K
Sbjct: 121 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRK 169
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 144/215 (66%), Gaps = 11/215 (5%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DYL+K V+IG+S VGKSNLL RF R+EF + + TIGVEFA R+I+ K+I+AQIW
Sbjct: 4 EDYDYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRAQIW 63
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAIT++YYRGA+GAL+VYDIT+ ++F++ ++WL EL++ + +++VGNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVVGNK 123
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
+DL+ +REV+E K E + L+F ETSA+ NVE AF ++ +I+ K
Sbjct: 124 ADLSQTREVDESTAKTFCENQKLFFFETSALDGTNVETAFKNLLIEIY----------KQ 173
Query: 187 NDKTATSNCNNLGGGK-EIINIDHEVTATKQSSCC 220
N N + K +I+ I+ + +S CC
Sbjct: 174 NVSNLDENAQKVPQEKPDIVPIEPVLPNGDKSKCC 208
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DYL+K VMIGDS VGKSNLL RF RDEF + K TIGVEF+ + IR D+ ++ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAIT++YYRGALGA+LVYD+T++++FE+ +WL ELR+ + ++VGNK
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNK 123
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI--HQTTIQKSLCA 184
DL REV+ +EG+ +A+ G +F ETSA NVE AF+ +I +I QT ++ S
Sbjct: 124 CDLEQMREVSIKEGEDMAKKIGAFFFETSAFDGKNVETAFMAIIQKICDEQTRLRASETK 183
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + S EI E K+S C
Sbjct: 184 PVIKPISDSKV-------EIDKTPEEQQTPKKSGCA 212
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 137/205 (66%), Gaps = 10/205 (4%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G IKAQIWDTAG ER+R
Sbjct: 2 VLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + ++LVGNKSDL+ SREV
Sbjct: 62 AITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
EE ++ AE GL F+ETSA+ + NVE AF ++ +I + +K A +N
Sbjct: 122 PTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------AKVSKQRQNNARTNA 175
Query: 196 NNLGGGKEIINIDHEVTATKQSSCC 220
LG G E+ ++ +CC
Sbjct: 176 VTLGSGPA----GQELGPGEKRACC 196
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQ 64
D+ DYLFK V+IGDS VGKSNLL RF + F+LDSK TIGVEFA +N+ + + K+ KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIAKAQ 63
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RAITS+YYRGA+GA++VYDI +++F + KWL EL ++ + I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITICLVG 123
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
NKSDLTH REV +E+G+ A L F ETS + + NV+ AF +++++I +
Sbjct: 124 NKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSRISE 174
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 130/177 (73%), Gaps = 2/177 (1%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DYL+K VMIGDS VGKSNLL RF RDEF + K TIGVEF+ + IR D+ ++ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAIT++YYRGALGA+LVYD+T++++FE+ +WL ELR+ + ++VGNK
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNK 123
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI--HQTTIQKS 181
DL REV +EG+ +A+ G +F ETSA+ NVE AF+ +I +I QT ++ S
Sbjct: 124 CDLEQMREVTIKEGEDMAKKIGAFFFETSALDGKNVETAFMAIIQKICDEQTRLRAS 180
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVG-DKLIKAQ 64
D+ DYLFK VM+GDS VGKSNLL R+ ++EF ++S T+G+EFA + I+ +++I+AQ
Sbjct: 2 DDNYDYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRAQ 61
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDT GQER+R++TS+YYRGA+GAL+VYD+T + +F+N + WL+ELR+F S + ++LVG
Sbjct: 62 IWDTCGQERYRSLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLVG 121
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
NK DL REV +E+ A+ +G+ F+ETSA++ NV+ AF ++I +IH+ Q+S
Sbjct: 122 NKIDLKDKREVRKEDASQFAQEQGIAFIETSALECSNVDIAFERIIYEIHRVVAQQS 178
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 128/174 (73%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLL R+ + EF L+SK TIGVEFA + I+ +K IKAQIWDTAGQ+R+R
Sbjct: 2 VLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
A+TS+YYRGA+GALLVYD+++ +T+E KWL+ELR+ + I+LVGNKSDL H R V
Sbjct: 62 AVTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLRHLRNV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
EE K A+ L F+ETSA + NVE AF ++ +I++ ++ + A+++ K
Sbjct: 122 PTEEAKSFAQRNNLSFIETSAQSSTNVEAAFNTILQEIYKNVVRNTAPAEVDSK 175
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 127/172 (73%), Gaps = 1/172 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYR-NIRVGDKLIKAQ 64
D+ DYL+K V+IGDS VGKSNLL+R+ ++EF L+SK TIGVEFA +I K+ K Q
Sbjct: 4 DDSYDYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKVQ 63
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RAITS+YYRGA+GAL+ YDIT R++FEN K+WL+ELR++ I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLVG 123
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQT 176
NK D+ + R+V ++EG LA E + F+E SA+ + NV AF ++I I+ T
Sbjct: 124 NKVDMVNLRQVTKDEGAKLARLENILFLECSALDSTNVNAAFAELIETIYTT 175
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/165 (58%), Positives = 121/165 (73%), Gaps = 1/165 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQIWDT 68
DYLFK V+IGDS VGKSNLL RF + F+LDSK TIGVEFA +N+ + + K+ KAQIWDT
Sbjct: 7 DYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKAQIWDT 66
Query: 69 AGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSD 128
AGQER+RAITS+YYRGA GA++VYDI + +F N +WL EL E+ M I LVGNKSD
Sbjct: 67 AGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIALVGNKSD 126
Query: 129 LTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
LTH REV E+G+ A + L F ETS + N N++ F +++N I
Sbjct: 127 LTHLREVTFEDGERYARSNNLLFFETSCLNNENIDTTFGELLNLI 171
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 129/182 (70%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + DE+ DYLFK V+IGDS VGK+N+L RF +EF+L+SKPTIGVEFA + + K
Sbjct: 1 MSRTNDEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKS 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+K QIWDTAGQERFRAIT++YYRGA+GA + YDITR TF+NT+KWL EL+E + I
Sbjct: 61 VKCQIWDTAGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+++GNK D SR V +E + E++ + F+ETSA+ N++ AF +++ I T K
Sbjct: 121 IMIGNKIDAVDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFNTIGSK 180
Query: 181 SL 182
++
Sbjct: 181 NI 182
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 139/220 (63%), Gaps = 7/220 (3%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG +E+ DYLFK + GDS+VGKSN++SR R+ F KPT+GVEF I+ K
Sbjct: 1 MGRRCNEDYDYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKT 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
I AQIWDT G ER+ + T S YRG GA+LVYDITRR TFEN KWL+ELR+ +S I
Sbjct: 61 IAAQIWDTCGLERYASFTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+L+GNKSDL H R V+ E+ + AE EGL FMETSA ++ NV+ A ++ +IH+ +K
Sbjct: 121 MLIGNKSDLQHLRSVSTEDAQKFAEKEGLLFMETSAFKSTNVDKALQIILQEIHRVFSEK 180
Query: 181 SLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
L ++ ++ +T + G K N T+++ CC
Sbjct: 181 ELHSEESNGVSTQDGKPTFGAKTRTN-------TQRTGCC 213
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 134/195 (68%), Gaps = 4/195 (2%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQ 64
D DYLFK V+IGDS VGKSNLL RF + F+LDSK TIGVEFA +N+++ + K+ KAQ
Sbjct: 4 DHNYDYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKAQ 63
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RAITS+YYRGA GA++VYDI R +F++ +WL EL E+ + M IVL G
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLAG 123
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI---HQTTIQKS 181
NKSDL + REV+ E+ + A+ L F ETS + + NVE AF ++++ I H+ +
Sbjct: 124 NKSDLVNLREVSTEDAERFAKANNLLFFETSCLNSDNVETAFTELLSAIGDNHEKLGDSA 183
Query: 182 LCAKMNDKTATSNCN 196
+ + + S CN
Sbjct: 184 VDSSTVPRPVVSLCN 198
>gi|302142935|emb|CBI20230.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 126/177 (71%), Gaps = 22/177 (12%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK F L+SK TIGVEFA R+IRV DK++KAQI
Sbjct: 7 DDDYDYLFK----------------------FSLESKSTIGVEFATRSIRVDDKIVKAQI 44
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN ++WL+ELR+ S + I+LVGN
Sbjct: 45 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGN 104
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
K DL H R V+ ++ K AE E +FMETSA++++NVE+AF +++ QI+Q +K+L
Sbjct: 105 KGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKAL 161
>gi|226507848|ref|NP_001151959.1| ras-related protein Rab11A [Zea mays]
gi|195651361|gb|ACG45148.1| ras-related protein Rab11A [Zea mays]
gi|223945145|gb|ACN26656.1| unknown [Zea mays]
gi|414886383|tpg|DAA62397.1| TPA: Ras protein Rab11A [Zea mays]
Length = 248
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 148/223 (66%), Gaps = 13/223 (5%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E DY+FK V++GD+AVGK+ LL+RFARDEF LDSKPTIGVEF R + + K +K QIWD
Sbjct: 26 EIDYVFKVVVVGDAAVGKTQLLARFARDEFALDSKPTIGVEFQTRTLTLHRKRVKTQIWD 85
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RA+TS+YYRGALGA++VYD+TRRATFE+ +W+ ELR + L+GNK+
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSTVVALIGNKA 145
Query: 128 DLTHS-REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
D+ + REV +E LAE +GL+F E SA+ NVE AFL ++ ++ +++L
Sbjct: 146 DMPAARREVPADEAARLAEDQGLFFSEASALTGDNVERAFLTLLEEVFAAVSRRALEL-- 203
Query: 187 NDKTATSNCNNLGGGKEIINID---------HEVTATKQSSCC 220
D+ + GG E++++ E +A K+SS C
Sbjct: 204 -DEARRMRGDQGDGGGEVLSLKGTAVDVGSIMETSAMKRSSQC 245
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 121/161 (75%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D++ DYLFK V+ GDS VGKSNLL RF +++F DSK TIGVEFA R+I + K++KAQI
Sbjct: 5 DDDYDYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITISGKVVKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAIT++YYRGA+GA+LVYDIT + +FE ++W++E+RE + I+++GN
Sbjct: 65 WDTAGQERYRAITAAYYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKDIVIMIIGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAF 166
KSDL H R + E G+ LA+ + FME SA NV+ AF
Sbjct: 125 KSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAF 165
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 138/205 (67%), Gaps = 10/205 (4%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IG+S VGK+NLLSRF R+EF+ DS+ TIGVEF+ R + +G IKAQIWDTAG ER+R
Sbjct: 2 VLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + ++LVGNKSDL +REV
Sbjct: 62 AITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKSDLQQAREV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
EE ++ AE GL F+ETSA+ + NVE AF ++ +I + +K ++ +N
Sbjct: 122 PTEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEIL------TKVSKQRQSSSRTNA 175
Query: 196 NNLGGGKEIINIDHEVTATKQSSCC 220
LGG + E ++ +CC
Sbjct: 176 ITLGGAQA----GQEQGPGEKRACC 196
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 128/177 (72%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E DYL K V+ GDS VGK+NLLSRF R+EF L+S+ TIGVEFA R++ + K +KAQI
Sbjct: 25 EDEYDYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTLKAQI 84
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQ+R+RAIT++YYR A+G + VYDI +R TF+N KWL+E R F + ++LVGN
Sbjct: 85 WDTAGQDRYRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILMLVGN 144
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
K+DL H R V+ +E + AE + ++ETSA+ +V+ AF ++ +I+ T QK L
Sbjct: 145 KTDLRHLRAVSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYSTISQKGL 201
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 129/168 (76%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY +K V+IGDS VGK+N++++F R EF ++K T+GVEFA + + + DK+IKAQ+W
Sbjct: 5 DDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKAQLW 64
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAI SSYY+GA GAL+V+DIT+++TF+N +W++E++E S+ ++I+LVGNK
Sbjct: 65 DTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMKEVQESTSNEISIILVGNK 124
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
SDL H R+V+ + A + F+ETSA NV +AF ++IN+IH
Sbjct: 125 SDLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLINEIH 172
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 119/151 (78%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + VGD +KAQIWDTAG ER+R
Sbjct: 1 VLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYR 60
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GAL+V+DIT+ T++ ++WL+EL + + + ++LVGNKSDL REV
Sbjct: 61 AITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREV 120
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAF 166
EE K+ AE +GL F+ETSA+ + NVE+AF
Sbjct: 121 PTEEAKMFAENKGLLFIETSALDSTNVEEAF 151
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 127/172 (73%), Gaps = 1/172 (0%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S +EE +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + V L+K+
Sbjct: 3 SEEEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLVKS 62
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAG ER+RAITS+YYRGA+GALLVYDIT+ ++EN +WL+EL + + + ++LV
Sbjct: 63 QIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVMLV 122
Query: 124 GNKSDLT-HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
GNK DL ++EV EE K AE GL F+ETSA+ NVE AF ++ I+
Sbjct: 123 GNKCDLKDEAQEVPSEEAKAYAEQNGLLFIETSALDATNVEVAFETILRDIY 174
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 144/216 (66%), Gaps = 5/216 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGK+ LLSRF ++EF DSK TIGVEF R + + KL+KAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQGKLVKAQIW 82
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA++VYDIT+R +F++ +W+ ELR I+LVGNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRVSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 127 SDL-THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
+DL R V E+ AET+ L+F E SA+ NV++AF +++ +I + S A
Sbjct: 143 ADLAVDKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVV-SRKAM 201
Query: 186 MNDKTATSNCNNLGGGKEIIN-IDHEVTATKQSSCC 220
+D A + G ++I+ D E++ K+ + C
Sbjct: 202 ESDGGAPVKLD--GSRIDVISGSDLEISKIKEQASC 235
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 130/182 (71%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
DE +++FK V+IG+S VGKSNLLSR+ ++EF DS+ TIGVEF+ R + + IKAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDIT+ T+++ ++WL+EL E + + ++LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL R V EE + AE L F+E+SA+++ NVE AF ++ +I + T K L
Sbjct: 124 KTDLELERSVPTEEARGFAENHKLLFLESSALESTNVEAAFNNVLMEIQKKTHNKELVQG 183
Query: 186 MN 187
N
Sbjct: 184 AN 185
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 140/216 (64%), Gaps = 8/216 (3%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
EE DY+FK V+IGDS VGK+ LL RF R +F LDSK TIG+EF R + + + +KAQIW
Sbjct: 2 EEPDYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIW 61
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA+LVYD+TRR +F + +W+ ELR + + LVGNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVGNK 121
Query: 127 SDLTHS----REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
+DL + REV +E + AE +GL+F E SA+ NVE AFL ++ +IH +K L
Sbjct: 122 ADLATAAPARREVRADEAEAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRKPL 181
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSS 218
A + + L G I++ E++ + S+
Sbjct: 182 EAARGNGDGDDDVLVLKG----ISLSQELSMMETSA 213
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 136/222 (61%), Gaps = 13/222 (5%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M D YD YLFK V+IGDS VGK+NLL RF R+EF L+SK TIGVEFA R+I+V +K+
Sbjct: 1 MSDDYD----YLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKV 56
Query: 61 IKAQIWDTAGQ--ERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCM 118
IKAQIWDT + SYYRGA+GALL YDI++ +TFE+ +WL+ELR+ S +
Sbjct: 57 IKAQIWDTGNYFISTSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNI 116
Query: 119 AIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
I+LVGNKSDL H R V +E K A GL F+ETSA+ NVE +F +++ +IH+
Sbjct: 117 VIMLVGNKSDLRHLRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILTEIHRIVS 176
Query: 179 QKSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K+L N T GG+ I+ CC
Sbjct: 177 NKALETSNNAIKPT-------GGQTILVSQSPDEPKPSGGCC 211
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 144/216 (66%), Gaps = 5/216 (2%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGK+ LLSRF +EF DSK TIGVEF R I + KL+KAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIW 82
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RA+TS+YYRGALGA++VYDIT+R +F++ +W+ ELR I+LVGNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 127 SDLT-HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
+DL+ R V E+ AET+ L+F E SA+ NV++AF +++ +I + S A
Sbjct: 143 ADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVV-SRKAM 201
Query: 186 MNDKTATSNCNNLGGGKEIIN-IDHEVTATKQSSCC 220
+D AT + G ++I+ D E + K+ + C
Sbjct: 202 ESDGGATVKLD--GSRIDVISGSDLETSNIKEQASC 235
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 108/130 (83%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ S + I+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLTHSREV 135
KSDL H R V
Sbjct: 125 KSDLRHLRAV 134
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 127/181 (70%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + DEE D+LFK V+IGDS VGK+N+L RF ++F+L+SKPTIGVEFA + ++ K
Sbjct: 1 MTRTNDEEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKS 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+K QIWDTAGQER+RAIT++YYRGA+GA + YD+TR TF+NT+KWL EL+E + I
Sbjct: 61 VKCQIWDTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVI 120
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+++GNK+D R V +E E + + F+ETSA+ N++ AF +++ I T K
Sbjct: 121 IMIGNKTDAVDQRAVRTDEASNFCEQQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSK 180
Query: 181 S 181
+
Sbjct: 181 T 181
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 130/196 (66%), Gaps = 7/196 (3%)
Query: 26 SNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFRAITSSYYRGA 85
SNLLSRF R+EF LDSK TIGVEFA R+I+V K IKAQIWDTAGQER+RAITS+YYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 86 LGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAE 145
+GALLVYDI++ T+EN +WL+ELR+ + + I+LVGNKSDL H R V EE K A
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKSFAS 127
Query: 146 TEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNCNNLGGGKEI- 204
L F+ETSA+ NVE AF ++ +I++ K+L + S +G G I
Sbjct: 128 ENHLSFIETSALDASNVELAFQNILTEIYRIVSSKAL------DSGDSAQATIGAGTNIS 181
Query: 205 INIDHEVTATKQSSCC 220
++ + A K CC
Sbjct: 182 LSKPADDDAAKGGKCC 197
>gi|303388958|ref|XP_003072712.1| RAS-related GTP-binding protein Rab11 [Encephalitozoon intestinalis
ATCC 50506]
gi|303301854|gb|ADM11352.1| RAS-related GTP-binding protein Rab11 [Encephalitozoon intestinalis
ATCC 50506]
Length = 236
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 138/221 (62%), Gaps = 12/221 (5%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G + E DYLFK V+IGDSAVGK+NLLS+ R+EF DSK TIGVEF ++G+ ++
Sbjct: 25 GITKSENFDYLFKIVLIGDSAVGKTNLLSKLTRNEFHKDSKATIGVEFGTITFKIGEDIV 84
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFEN-TKKWLRELREFCSSCMAI 120
KAQIWDTAGQER++AI +YYRG GA +VYDIT + + + T WL++LR+F S + I
Sbjct: 85 KAQIWDTAGQERYQAIVQAYYRGTSGAAIVYDITNKDSLKKATSLWLKQLRDFSPSEIPI 144
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH-QTTIQ 179
VL+GNK DL R+V+ ++GK A T L F ETSA+ NV +AFL+++ IH + Q
Sbjct: 145 VLIGNKKDLEDDRDVDTQKGKDEAVTNELSFFETSALTGENVREAFLELVKTIHKKVKTQ 204
Query: 180 KSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K+ K K+ + NL EV + CC
Sbjct: 205 KASIGKRKLKSVEFSKENL----------KEVKPQPKKGCC 235
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + + L
Sbjct: 1 MG-SEEEDFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHL 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+K+QIWDTAG ER+RAITS+YYRGA+GALLVYDIT+ ++E+ +WL+EL + + + +
Sbjct: 60 VKSQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVV 119
Query: 121 VLVGNKSDLT-HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
+LVGNKSDL ++EV EE K AE GL F+ETSA+ NVE AF ++ I+
Sbjct: 120 MLVGNKSDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFETILRDIY 174
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/151 (60%), Positives = 117/151 (77%), Gaps = 1/151 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R++F L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYF 151
+L GNKSDL H R V +E + AE + +
Sbjct: 120 MLAGNKSDLRHLRAVPTDEARAFAEKNTILY 150
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 135/194 (69%), Gaps = 11/194 (5%)
Query: 31 RFARDEFRLDSKPTIGVEFAYRNIRV-GDKLIKAQIWDTAGQERFRAITSSYYRGALGAL 89
RF RDEF L+SK TIGVEFA ++I++ DK+IKAQIWDTAGQER+RAITS+YYRGA+GAL
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 90 LVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGL 149
LVYDIT++ TFEN +KWL+ELR+ S + I+LVGNKSDL H R +N+ + A+ E L
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDATQFAKKEKL 135
Query: 150 YFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNCNNLGGGKEIINID- 208
F+ETSA++ NVE AF Q++N+I+ QK K D N N GK+ IN+D
Sbjct: 136 AFIETSALEATNVELAFHQLLNEIYNVR-QKKQATKSED-----NVNIQPRGKK-INVDD 188
Query: 209 --HEVTATKQSSCC 220
E ++ CC
Sbjct: 189 DNDENEKKPKTKCC 202
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 143/222 (64%), Gaps = 11/222 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG S +EE +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + + L
Sbjct: 1 MG-SEEEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHL 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
+K+QIWDTAG ER+RAITS+YYRGA+GALLVYDIT+ ++E+ +WL+EL + + + +
Sbjct: 60 VKSQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVV 119
Query: 121 VLVGNKSDLT-HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
+LVGNK DL ++EV EE K AE GL F+ETSA+ NVE AF ++ I+ ++
Sbjct: 120 MLVGNKCDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFESILRDIYMRVLK 179
Query: 180 KSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQS-SCC 220
K T + + KE T+Q SCC
Sbjct: 180 S--------KGETQQPSTINLSKEASPTQSITLVTEQKRSCC 213
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 134/207 (64%), Gaps = 8/207 (3%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF ++F ++SK TIGVEFA R I V K IKAQIWDTAGQER+R
Sbjct: 29 VLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERYR 88
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L+GNKSDL H R V
Sbjct: 89 AITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDLDHLRAV 148
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
+E + A+ L F ETSA+++ NVE AF ++I I+Q + +K S
Sbjct: 149 PTDEARNFAQENQLLFTETSALKSENVELAFRELITAIYQ------MVSKHQVDLGDSGN 202
Query: 196 NNLGGGKEIINIDHEVTATKQSS--CC 220
NN G I K+SS CC
Sbjct: 203 NNAPKGPTISLTPAPNEHKKKSSGNCC 229
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 127/180 (70%), Gaps = 3/180 (1%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E DY+FK V++GDSAVGK+ LL RF RDEF LDSK TIG+EF R + + +KAQIWD
Sbjct: 2 EEDYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWD 61
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RA+TS+YYRGALGA+LVYD+T R TF++ +W+ ELR + ++LVGNK+
Sbjct: 62 TAGQERYRAVTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKA 121
Query: 128 DLTHS---REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
DL R V+ +E AE +GL+F E SA+ NVE AFL ++ +IH +K+L A
Sbjct: 122 DLARDAGRRAVDADEAAAFAEEQGLFFSEASALSGDNVERAFLTLLREIHAIVSRKTLDA 181
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 120/166 (72%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E DYL K V+IGDS VGK+NLL+RF RD+F +SK TIGVEFA + +++ K IKAQIWD
Sbjct: 5 EPDYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWD 64
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQER+RAITS+YYRGA+GALL+YDIT TF + +KWL+ELRE + ++LVGNK
Sbjct: 65 TAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKC 124
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
DL+ R V A+ + L F+ETSA + NV +AF +I +I
Sbjct: 125 DLSEQRAVTSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEI 170
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 122/161 (75%)
Query: 13 FKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQE 72
F V+IGDS VGK+N+LSRFA DEF LDSK T+GVEF+ + ++V + +IKAQIWDTAGQE
Sbjct: 18 FVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQE 77
Query: 73 RFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHS 132
R+R+ITS+YYRGA+GAL+VYDIT R++FEN + WL ELR+ M +VL+GNK DL +
Sbjct: 78 RYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLANQ 137
Query: 133 REVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
R ++ +E + AE + F+ETSA + +++AF ++ ++
Sbjct: 138 RSISTDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRL 178
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 125/174 (71%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
+CD L+K V+IGDS VGKSNL++RF +++F D+KPTIGVEF ++I IK QIWD
Sbjct: 2 DCDVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWD 61
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQERFRAI+++YYRGA GAL+VYDIT + +F+N +KW +E+ + +LVGNK
Sbjct: 62 TAGQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVGNKC 121
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKS 181
DL H R+V G+ AE + FMETSA+ + NV++AF ++ +I++T +KS
Sbjct: 122 DLNHLRQVETATGRAFAEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKS 175
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 115/156 (73%)
Query: 27 NLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFRAITSSYYRGAL 86
NLLSRF R+EF L+SK TIGVEFA R+I V K +KAQIWDTAGQER+RAITS+YYRGA+
Sbjct: 17 NLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAV 76
Query: 87 GALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAET 146
GALLVYDI + T+EN +WL+ELR+ + + I+LVGNKSDL H R V+ +E K A
Sbjct: 77 GALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVSTDEAKQFATE 136
Query: 147 EGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
GL F+ETSA+ NVE AF ++ I++ KSL
Sbjct: 137 NGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL 172
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 136/205 (66%), Gaps = 10/205 (4%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G +KAQIWDTAG ER+R
Sbjct: 2 VLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + ++LVGNKSDL +REV
Sbjct: 62 AITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQAREV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNC 195
EE ++ AE GL F+ETSA+ + NVE AF ++ +I + +K ++ +N
Sbjct: 122 PTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF------TKVSKQRQNSSRTNA 175
Query: 196 NNLGGGKEIINIDHEVTATKQSSCC 220
LG + E ++ +CC
Sbjct: 176 ITLGSAQA----GQEPGPGEKRACC 196
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 134/187 (71%), Gaps = 1/187 (0%)
Query: 5 YDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQ 64
++E+ D+L+K V+IG+S VGKSNLL RF R+EF + + TIGVEFA R+I+ K+I+AQ
Sbjct: 1 HEEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQ 60
Query: 65 IWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVG 124
IWDTAGQER+RAIT++YYRGA+GAL+VYDIT+ TF++ ++WL EL++ + I+++G
Sbjct: 61 IWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIG 120
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK+DL +REV E K + + L+F ETSA+ NVE AF ++ +I + ++
Sbjct: 121 NKADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNAS-AVEE 179
Query: 185 KMNDKTA 191
NDK A
Sbjct: 180 SSNDKPA 186
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 123/171 (71%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+ E D+LFK ++IGDS VGK+N+L RF ++EF LDSKPTIGVEF+ + I V +K +K QI
Sbjct: 6 ENEYDFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKCQI 65
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAIT++YYRGA+GA + YDITR TF N +KWL E++E+ + I+++GN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMIGN 125
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQT 176
K D + R V E L + + ++ETSA LNVE+AF ++++I +
Sbjct: 126 KIDQANDRMVRSVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVSEIFSS 176
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 114/168 (67%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + DK +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIADKSVKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF++ +WL E R+ S M I+L+GNK+DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFKHLGRWLEEARQHSQSNMVIMLIGNKNDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
H R V+ EEGK A+ GL FMETSA NVE AF+ +IH +
Sbjct: 125 HRRAVSTEEGKAFADKHGLIFMETSAKTAYNVEQAFINTAEEIHGNIV 172
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 10/216 (4%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+ E DYLFK ++IGDS VGKS LL RFA D + D TIGV+F R I + K IK QI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFR ITSSYYRGA G ++VYD+T + +F N K+WL+E+ + + + +LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGN 121
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL+ + V K A+ + F+ETSA+ + NVE AF M QI A+
Sbjct: 122 KADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIK---------AQ 172
Query: 186 MNDKTATSNCNNLGGGKEIINI-DHEVTATKQSSCC 220
M + T++ N NN GK +N+ +T+ + +SCC
Sbjct: 173 MTNNTSSGNANNANSGKSNVNLRGQSLTSNQANSCC 208
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 132/185 (71%), Gaps = 1/185 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ D+L+K V+IG+S VGKSNLL RF R+EF + + TIGVEFA R+I+ K+I+AQIW
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 63
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAIT++YYRGA+GAL+VYDIT+ TF++ ++WL EL++ + I+++GNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 123
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
+DL +REV E K + + L+F ETSA+ NVE AF ++ +I + ++
Sbjct: 124 ADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQN-ASAVEESS 182
Query: 187 NDKTA 191
NDK A
Sbjct: 183 NDKPA 187
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 121/169 (71%), Gaps = 2/169 (1%)
Query: 12 LFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQ 71
+ V+IG+ VGKSNLLSRF R+EF L SKPTIGVEFA + I V K +K QIWDTAG
Sbjct: 22 IISVVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGM 81
Query: 72 ERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTH 131
ERFR SSYYRGALGALLVYDI++ T+E+ ++WL+ LR+ + + I LVGNKSDL+H
Sbjct: 82 ERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLSH 141
Query: 132 SREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
+ V +E KI AE + F+ETSA+ N NVE AF ++ +I++ +K
Sbjct: 142 A--VPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 188
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 136/188 (72%), Gaps = 7/188 (3%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ D+L+K V+IG+S VGKSNLL RF R+EF + + TIGVEFA R+I+ K+I+AQIW
Sbjct: 28 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 87
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAIT++YYRGA+GAL+VYDIT+ TF++ ++WL EL++ + I+++GNK
Sbjct: 88 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 147
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ---TTIQKSLC 183
+DL +RE+ E K + + L+F ETSA+ NVE AF ++ +I + +T++++
Sbjct: 148 ADLAQTREIEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASTVEET-- 205
Query: 184 AKMNDKTA 191
NDK A
Sbjct: 206 --SNDKPA 211
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 130/195 (66%), Gaps = 1/195 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV-GDKLIKAQI 65
E D++FK V++GDS VGKSNL+ RF ++EF DSK TIGVEFA + +++ DKL+KAQI
Sbjct: 4 ESYDFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+R+I SSYYRGA+GALLVYD+T R +F + WL+E+ E I+LVGN
Sbjct: 64 WDTAGQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DL R V +G+ A GL F+ETSA+ V+ AF +++ +I++T +K L ++
Sbjct: 124 KMDLHEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQLKSQ 183
Query: 186 MNDKTATSNCNNLGG 200
A + G
Sbjct: 184 GGGGKAPAKTGPKAG 198
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 126/169 (74%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ D+L+K V+IG+S VGKSNLL RF R+EF + + TIGVEFA R+I+ K+I+AQIW
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 63
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAIT++YYRGA+GAL+VYDIT+ TF++ ++WL EL++ + I+++GNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 123
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+DL +REV E K + + L+F ETSA+ NVE AF ++ +I +
Sbjct: 124 ADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFK 172
>gi|429965625|gb|ELA47622.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 207
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 123/170 (72%), Gaps = 1/170 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E DYLFK V+IGDS VGK+NLLS+ R EF ++K TIGVEFA R ++ + +IKAQIW
Sbjct: 2 ESYDYLFKIVLIGDSGVGKTNLLSQLTRGEFSAETKATIGVEFATRTFKIDNLVIKAQIW 61
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFEN-TKKWLRELREFCSSCMAIVLVGN 125
DTAGQER+RAITS+YYRG LGAL+VYDITR++T N TK WL +L+E+ + I++VGN
Sbjct: 62 DTAGQERYRAITSAYYRGTLGALIVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMMVGN 121
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
K+DL R V G A++ L F+ETSA+ NVE AF ++I +++
Sbjct: 122 KTDLEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFDELIKAVYR 171
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%)
Query: 14 KAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQER 73
+ V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G +KAQIWDTAG ER
Sbjct: 36 RVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 95
Query: 74 FRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSR 133
+RAITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + ++LVGNKSDL+ +R
Sbjct: 96 YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 155
Query: 134 EVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
EV EE + AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 156 EVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEI 195
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 126/167 (75%), Gaps = 2/167 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+ ++++K V+IG+S VGKSNLLSRF ++EF DS+ TIGVEF+ R +++ +KAQI
Sbjct: 4 DDSYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTVKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAG ER+RAITS+YYRGA+GALLVYDI++ T+E+T++WL+EL E + ++LVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGN 123
Query: 126 KSDLTHSREVNEEEGKIL--AETEGLYFMETSAMQNLNVEDAFLQMI 170
K DL + R V E G L +E +GL FMETSA+ + NVE AF +++
Sbjct: 124 KRDLENLRTVPSEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|300122550|emb|CBK23119.2| unnamed protein product [Blastocystis hominis]
Length = 211
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/165 (58%), Positives = 114/165 (69%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I +G+ IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIGENQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF KWL E RE SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFTQLTKWLTEARENGSSNMVIMLIGNKSDLN 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
H R V+ EEG+ AE GL F+ETSA NVE+AF++ +I+
Sbjct: 125 HRRTVSTEEGEKFAEENGLIFLETSAKTAANVEEAFVKTAEKIYH 169
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 117/151 (77%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G +KAQIWDTAG ER+R
Sbjct: 34 VLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYR 93
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + ++LVGNKSDL+ +REV
Sbjct: 94 AITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSQAREV 153
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAF 166
+E ++ AE GL F+ETSA+ + NVE AF
Sbjct: 154 PTDEARMFAENNGLLFLETSALDSTNVELAF 184
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 120/158 (75%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G +KAQIWDTAG ER+R
Sbjct: 2 VLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYR 61
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLV+D+T+ T+ ++WL+EL + + + ++LVGNKSDL+ +REV
Sbjct: 62 AITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREV 121
Query: 136 NEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
EE + AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 122 PTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEI 159
>gi|440494412|gb|ELQ76793.1| GTPase Rab11/YPT3, small G protein superfamily [Trachipleistophora
hominis]
Length = 207
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 122/170 (71%), Gaps = 1/170 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E DYLFK V+IGDS VGK+NLLS+ R EF ++K TIGVEFA + ++ +IKAQIW
Sbjct: 2 ENYDYLFKIVLIGDSGVGKTNLLSQLTRKEFSAETKATIGVEFATKTFKIDSLVIKAQIW 61
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFEN-TKKWLRELREFCSSCMAIVLVGN 125
DTAGQER+RAITS+YYRG LGAL+VYDITR++T N TK WL +L+E+ + I+LVGN
Sbjct: 62 DTAGQERYRAITSAYYRGTLGALVVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMLVGN 121
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
K+DL R V G A++ L F+ETSA+ NVE AF ++I +++
Sbjct: 122 KTDLEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFEELIKAVYR 171
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 135/214 (63%), Gaps = 19/214 (8%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
E+ DY+FK V+IGDSAVGKS +L+RFAR+EF +DSK TIGVEF R + + K
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK------- 57
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
+RA+TS+YYRGALGALLVYDIT+R +F++ +WL ELR + I+LVGNK
Sbjct: 58 -------YRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 110
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKM 186
SDL R V+ E+ K AE E L+F+ETSA+Q NVE+AF ++++I + +K++ A
Sbjct: 111 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAA-- 168
Query: 187 NDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D A +L G K + + +S CC
Sbjct: 169 -DPKANGAAPSLAGKKVV--VPGPAQEIPKSKCC 199
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 127/173 (73%), Gaps = 1/173 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ +E+ +++FK V+IG+S VGK+NLLSRF R+EF DS+ TIGVEF+ R + +G
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAG E +R T YYRGA+GALLV+D+T+ T+ ++WL+EL + + + +
Sbjct: 61 IKAQIWDTAGLELYRG-TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+LVGNKSDL+ +REV +E ++ AE GL F+ETSA+ + NVE AF ++ +I
Sbjct: 120 MLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 172
>gi|401825992|ref|XP_003887090.1| Rab11-like GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998248|gb|AFM98109.1| Rab11-like GTPase [Encephalitozoon hellem ATCC 50504]
Length = 235
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 136/221 (61%), Gaps = 12/221 (5%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G + E DYLFK V+IGDSAVGK+NLLS+ R+EF DSK TIGVEF ++G+ ++
Sbjct: 25 GITKGENFDYLFKIVLIGDSAVGKTNLLSKLTRNEFHKDSKATIGVEFGTITFKIGEDVV 84
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFEN-TKKWLRELREFCSSCMAI 120
KAQIWDTAGQER++AI +YYRG GA++VYDIT + + + T WL++LR+F S + I
Sbjct: 85 KAQIWDTAGQERYQAIVQAYYRGTSGAVIVYDITNKDSLKKATGLWLKQLRDFSPSEIPI 144
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH-QTTIQ 179
VL+GNK DL R V+ ++GK A L F ETSA+ NV +AFL++ IH + Q
Sbjct: 145 VLIGNKKDLEDDRAVDTQKGKDEAVANELSFFETSALTGENVREAFLELAKTIHKKVKAQ 204
Query: 180 KSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K+ K K+ +L EV T + CC
Sbjct: 205 KASVGKKRLKSVEFRRESL----------KEVKPTPKKGCC 235
>gi|387592730|gb|EIJ87754.1| GTPase Ypt3 [Nematocida parisii ERTm3]
gi|387595356|gb|EIJ92980.1| GTPase Ypt3 [Nematocida parisii ERTm1]
Length = 206
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 144/216 (66%), Gaps = 16/216 (7%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E +YL+K V+IGDS+VGK+NLL R A + F ++K TIGVEF + V K IKAQI
Sbjct: 5 EQEYEYLYKIVLIGDSSVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTK-KWLRELREFCSSCMAIVLVG 124
WDTAGQER+RAITS+YYRGA+GA++VYDITR+ +F+N + +W+++L++ S + I LVG
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGAIVVYDITRKESFDNARTEWIKQLKDNSESGLVISLVG 124
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK+DL R+V+++E + A+ ETSA+ ++NV++AF +I +I+QT
Sbjct: 125 NKTDLEEKRQVSQQEAREAAQIGDYLLTETSALSDVNVQEAFEALIKKIYQTR------- 177
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
T+ NN G IIN++ + + SS C
Sbjct: 178 -------TAERNN-GPKPSIINLEDDSSMKASSSWC 205
>gi|19074145|ref|NP_584751.1| RAS-RELATED GTP-BINDING PROTEIN RAB11 [Encephalitozoon cuniculi
GB-M1]
gi|449329015|gb|AGE95290.1| ras-related GTP-binding protein rab11 [Encephalitozoon cuniculi]
Length = 238
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 134/221 (60%), Gaps = 12/221 (5%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G + E DYLFK V+IGDSAVGK+NLLS+ R+EF DSK TIGVEF ++G+ ++
Sbjct: 28 GVAKGENFDYLFKIVLIGDSAVGKTNLLSKLTRNEFHKDSKATIGVEFGTITFKIGEDVV 87
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFEN-TKKWLRELREFCSSCMAI 120
KAQIWDTAGQER++AI +YYRG GA +VYDIT + + + T WL++LR+F + + I
Sbjct: 88 KAQIWDTAGQERYQAIVQAYYRGTSGAAIVYDITNKDSLKKATGLWLKQLRDFSPNEIPI 147
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ-TTIQ 179
VL+GNK DL REV + GK A T L F ETSA+ NV DAF +++ IH+ Q
Sbjct: 148 VLIGNKKDLESDREVPTQRGKDEAVTNELSFFETSALTGENVRDAFFELVKIIHKRAKAQ 207
Query: 180 KSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K K +T +L EV + + CC
Sbjct: 208 KVSIGKKKLRTVEFKRESL----------REVKPSPKKGCC 238
>gi|301105767|ref|XP_002901967.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099305|gb|EEY57357.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
Length = 210
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + +K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + +WL E R+ +S MAI+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMND 188
H R V+ +EG+ A+ GL F+ETSA NVEDAF++ ++I+ + IQ +C N+
Sbjct: 125 HRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIY-SNIQSGVCDVTNE 181
>gi|392512605|emb|CAD25255.2| RAS-RELATED GTP-BINDING PROTEIN RAB11 [Encephalitozoon cuniculi
GB-M1]
Length = 234
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 134/221 (60%), Gaps = 12/221 (5%)
Query: 2 GDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLI 61
G + E DYLFK V+IGDSAVGK+NLLS+ R+EF DSK TIGVEF ++G+ ++
Sbjct: 24 GVAKGENFDYLFKIVLIGDSAVGKTNLLSKLTRNEFHKDSKATIGVEFGTITFKIGEDVV 83
Query: 62 KAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFEN-TKKWLRELREFCSSCMAI 120
KAQIWDTAGQER++AI +YYRG GA +VYDIT + + + T WL++LR+F + + I
Sbjct: 84 KAQIWDTAGQERYQAIVQAYYRGTSGAAIVYDITNKDSLKKATGLWLKQLRDFSPNEIPI 143
Query: 121 VLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ-TTIQ 179
VL+GNK DL REV + GK A T L F ETSA+ NV DAF +++ IH+ Q
Sbjct: 144 VLIGNKKDLESDREVPTQRGKDEAVTNELSFFETSALTGENVRDAFFELVKIIHKRAKAQ 203
Query: 180 KSLCAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K K +T +L EV + + CC
Sbjct: 204 KVSIGKKKLRTVEFKRESL----------REVKPSPKKGCC 234
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 115/165 (69%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + +K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ +S M I+L+GNK+DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKADLA 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
H R V+ EEG+ A+ GL FMETSA NVE+AF+ ++IHQ
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMETSAKTAQNVEEAFINTASKIHQ 169
>gi|348684558|gb|EGZ24373.1| hypothetical protein PHYSODRAFT_483962 [Phytophthora sojae]
Length = 210
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + +K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + +WL E R+ +S MAI+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMND 188
H R V+ +EG+ A+ GL F+ETSA NVEDAF++ ++I+ + IQ +C N+
Sbjct: 125 HRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIY-SNIQSGVCDVTNE 181
>gi|256084269|ref|XP_002578353.1| rab-2414 [Schistosoma mansoni]
gi|360045234|emb|CCD82782.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 213
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 129/213 (60%), Gaps = 7/213 (3%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + DK IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDDKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFTHLTTWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
R+V +EEG+ A GL FMETSA NVEDAF+ IH IQ+ + N+
Sbjct: 125 SRRDVQKEEGEAFAREHGLIFMETSAKTAANVEDAFIDTAKCIH-GKIQEGVLDVNNEAN 183
Query: 191 AT---SNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ N +GG N+ + T + CC
Sbjct: 184 GIKLGPHHNPVGGAYNNSNLTNR---TSGAGCC 213
>gi|116786670|gb|ABK24196.1| unknown [Picea sitchensis]
Length = 213
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 135/210 (64%), Gaps = 2/210 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I +G+K IK QIWDTAG
Sbjct: 5 YLFKYIVIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIGNKPIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ +S M I+L+GNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLATWLEDARQHANSNMTIMLIGNKCDLD 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
H R V+ EEG A+ GL FMETSA NVE+AF+ +I+Q I++ + ++++T
Sbjct: 125 HRRAVSTEEGAQFAKEHGLVFMETSAKTAQNVEEAFINTAAKIYQ-KIEEGIF-DVSNET 182
Query: 191 ATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ GG ++ ++ TA + S CC
Sbjct: 183 SGIKVGYGGGAGTAGSVRNDYTAPQSSGCC 212
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 105/130 (80%)
Query: 16 VMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFR 75
V+IGDS VGKSNLLSRF R+EF LDSK TIGVEFA R+I+V K IK+QIWDTAGQER+R
Sbjct: 33 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERYR 92
Query: 76 AITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREV 135
AITS+YYRGA+GALLVYDI++ T+EN +WL+ELR+ S + I+LVGNKSDL H R V
Sbjct: 93 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAV 152
Query: 136 NEEEGKILAE 145
EE K A+
Sbjct: 153 PTEEAKQFAK 162
>gi|384501465|gb|EIE91956.1| hypothetical protein RO3G_16667 [Rhizopus delemar RA 99-880]
Length = 187
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 124/169 (73%), Gaps = 1/169 (0%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
D+E DYL+K V+ GDS VGKSN++SRFAR+EF L + T GV+F + + + ++KAQ+
Sbjct: 2 DDEYDYLYKLVLTGDSGVGKSNVVSRFARNEFDLVYRKTYGVDFTTKTLGTDNHIVKAQL 61
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
DTAG+ERFR I +++YR A GA +VYDIT R++FEN WLR++RE+ I+LVGN
Sbjct: 62 CDTAGEERFRVIITAFYRNAAGAFIVYDITSRSSFENVHIWLRKIREYADPNAVIMLVGN 121
Query: 126 KSDLTH-SREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
K DL+ SREV EEG++LAE EGL F+ETSA+ N++ AF +I++I
Sbjct: 122 KVDLSKSSREVETEEGRLLAEEEGLLFIETSALDATNIDAAFTILISKI 170
>gi|195033809|ref|XP_001988767.1| GH11344 [Drosophila grimshawi]
gi|193904767|gb|EDW03634.1| GH11344 [Drosophila grimshawi]
Length = 243
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 37 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 96
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 97 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 156
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 157 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 202
>gi|28574177|ref|NP_788056.1| Rab14, isoform B [Drosophila melanogaster]
gi|195338419|ref|XP_002035822.1| GM15560 [Drosophila sechellia]
gi|28380366|gb|AAO41193.1| Rab14, isoform B [Drosophila melanogaster]
gi|194129702|gb|EDW51745.1| GM15560 [Drosophila sechellia]
Length = 239
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 33 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 92
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 93 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 152
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 153 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 198
>gi|17137218|ref|NP_477171.1| Rab14, isoform A [Drosophila melanogaster]
gi|2313041|dbj|BAA21709.1| rab14 [Drosophila melanogaster]
gi|7298153|gb|AAF53390.1| Rab14, isoform A [Drosophila melanogaster]
gi|297591874|gb|ADI46814.1| MIP20481p [Drosophila melanogaster]
Length = 215
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 9 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 68
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 69 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 128
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 129 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 174
>gi|195397826|ref|XP_002057529.1| GJ18183 [Drosophila virilis]
gi|194141183|gb|EDW57602.1| GJ18183 [Drosophila virilis]
Length = 236
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 30 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 89
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 90 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 149
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 150 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 195
>gi|118379577|ref|XP_001022954.1| Ras family protein [Tetrahymena thermophila]
gi|89304721|gb|EAS02709.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 1307
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 118/159 (74%)
Query: 20 DSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFRAITS 79
DS VGKS L+SRF +D+F ++ +PTIGVEF+ + I++ DK+IKAQIWDTAGQER+RAITS
Sbjct: 1107 DSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQERYRAITS 1166
Query: 80 SYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREVNEEE 139
+YYRGA GAL+V+DIT++ +FEN KW +EL+E + +L+GNK DL R ++++
Sbjct: 1167 AYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDLADQRNISKDA 1226
Query: 140 GKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
A+ + ++ETSA+ + NVE AF Q+I I+ +TI
Sbjct: 1227 ASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIYDSTI 1265
>gi|321478009|gb|EFX88967.1| hypothetical protein DAPPUDRAFT_304738 [Daphnia pulex]
Length = 212
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 131/218 (60%), Gaps = 18/218 (8%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ +S M I+L+GNKSDL
Sbjct: 65 QEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL-------- 182
REV +EEG+ A GL FMETSA NVE+AF+ +I++ IQ+ +
Sbjct: 125 SRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAREIYE-KIQEGVFDINNEAN 183
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K+ + SN N GG +A++ +CC
Sbjct: 184 GIKLGPQHLPSNANTPSGG---------ASASQGGACC 212
>gi|195436943|ref|XP_002066405.1| GK18273 [Drosophila willistoni]
gi|194162490|gb|EDW77391.1| GK18273 [Drosophila willistoni]
Length = 243
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 37 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 96
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 97 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 156
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 157 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 202
>gi|28574179|ref|NP_788057.1| Rab14, isoform C [Drosophila melanogaster]
gi|28380367|gb|AAO41194.1| Rab14, isoform C [Drosophila melanogaster]
gi|157816819|gb|ABV82401.1| RH10422p [Drosophila melanogaster]
Length = 233
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 27 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 86
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 87 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 146
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 147 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 192
>gi|194758573|ref|XP_001961536.1| GF14883 [Drosophila ananassae]
gi|190615233|gb|EDV30757.1| GF14883 [Drosophila ananassae]
Length = 239
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 33 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 92
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 93 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 152
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 153 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 198
>gi|195474015|ref|XP_002089287.1| GE19031 [Drosophila yakuba]
gi|194175388|gb|EDW88999.1| GE19031 [Drosophila yakuba]
Length = 239
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 33 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 92
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 93 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 152
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 153 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 198
>gi|195164876|ref|XP_002023272.1| GL21269 [Drosophila persimilis]
gi|198473182|ref|XP_001356197.2| GA18036 [Drosophila pseudoobscura pseudoobscura]
gi|194105357|gb|EDW27400.1| GL21269 [Drosophila persimilis]
gi|198139340|gb|EAL33257.2| GA18036 [Drosophila pseudoobscura pseudoobscura]
Length = 239
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 33 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 92
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 93 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 152
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 153 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 198
>gi|195115754|ref|XP_002002421.1| GI12880 [Drosophila mojavensis]
gi|193912996|gb|EDW11863.1| GI12880 [Drosophila mojavensis]
Length = 243
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 37 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 96
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 97 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 156
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 157 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 202
>gi|378755008|gb|EHY65036.1| GTP-binding protein ypt3 [Nematocida sp. 1 ERTm2]
Length = 210
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 140/216 (64%), Gaps = 16/216 (7%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E +YL+K V+IGDS VGK+NLL R A + F ++K TIGVEF + V K IKAQI
Sbjct: 9 EQEYEYLYKIVLIGDSGVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKAQI 68
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTK-KWLRELREFCSSCMAIVLVG 124
WDTAGQER+RAITS+YYRGA+GA++VYDI+R+ TF+N + +W+++L++ S + I LVG
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGAIVVYDISRKETFDNARTEWIKQLKDNSESGLVISLVG 128
Query: 125 NKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA 184
NK+DL R+V+ +E + A+ G ETSA+ ++NV++AF +I +I+QT + A
Sbjct: 129 NKTDLNEKRQVSLQEAREAAQIGGYQLTETSALSDVNVQEAFETLIQKIYQTRAGERHSA 188
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
D IIN++ + +S C
Sbjct: 189 PKQD---------------IINLEDDAAMKASNSWC 209
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 138/198 (69%), Gaps = 12/198 (6%)
Query: 28 LLSRFARDEFRLDSKPTIGVEFAYRNIRVGD-KLIKAQIWDTAGQERFRAITSSYYRGAL 86
+LSRF RDEF L+SK TIGVEFA +++ + + K+IKAQIWDTAGQER+RAITS+YYRGA+
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 87 GALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAET 146
GALLVYDIT+R +FEN ++WL+ELR+ + I+LVGNKSDL H R V+ EE A
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANR 120
Query: 147 EGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKTATSNCNNLGGGKEIIN 206
E L F+ETSA+ NVE AF Q++ +I+ +K + + N ++ T G G++ I+
Sbjct: 121 EHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQI--EDNPQSTTQP----GRGQK-IH 173
Query: 207 IDHEVTATK----QSSCC 220
+D E T ++ + CC
Sbjct: 174 LDEERTDSQIRQSRRGCC 191
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 130/215 (60%), Gaps = 13/215 (6%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+ E DYLFK ++IGDS VGKS LL RFA D + D TIGV+F R I + K IK QI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFR ITSSYYRGA G ++VYD+T + +F N +WL+E+ + +S + +LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQWLQEIDRYATSGVMKLLVGN 121
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K DLT + V+ K A++ G+ F+ETSA Q+ NVE AF+ M QI ++
Sbjct: 122 KCDLTDKKVVDYAVAKEFADSRGIKFLETSASQSTNVEQAFIVMSKQIK---------SQ 172
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
M + SN GK +N+ +Q CC
Sbjct: 173 MANSQPASNT----AGKPSVNLSGTSVINQQGGCC 203
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 118/164 (71%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK V++GDS VGKSNLL RF ++EF + + TIGVEF+ +++++ +L+KAQIWDTA
Sbjct: 11 DYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQLVKAQIWDTA 70
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+RA+T +YYR A+GALL+YDIT R +FEN KKW EL + ++LVGNK DL
Sbjct: 71 GQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVMILVGNKCDL 130
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+ R + EE + A++ + F+ETSA+ NV AF +I +I
Sbjct: 131 SDQRAIKIEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEI 174
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 123/169 (72%), Gaps = 2/169 (1%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+E DYLF V+IGD+ VGK+N+L+R+A++EF D+K T+GVEFA + + + +K IKAQI
Sbjct: 7 EERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNKTIKAQI 64
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDIT R+TF+N WL EL + + M IVLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMTIVLVGN 124
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
K DL + R + +E AE + F+ETSA + ++ AF +++ I+
Sbjct: 125 KCDLANLRVIESQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSGIY 173
>gi|126643983|ref|XP_001388160.1| Rab2 GTPase [Cryptosporidium parvum Iowa II]
gi|126117237|gb|EAZ51337.1| Rab2 GTPase, putative [Cryptosporidium parvum Iowa II]
Length = 185
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 119/169 (70%), Gaps = 1/169 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK ++IGD+AVGKS LL +F FR+D TIGVEF R I + K IK QIWDTA
Sbjct: 6 DYLFKYIIIGDTAVGKSCLLLQFTDRRFRVDHDLTIGVEFGARIINLDAKKIKLQIWDTA 65
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQE FR+IT SYYRGA GALLVYDITRR TF + KWL +++ + M I+LVGNKSDL
Sbjct: 66 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLSKWLNDVKRNATPNMTIILVGNKSDL 125
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
REV EEG AE GL F+ETSA + NVE+AF+++ +I++ +
Sbjct: 126 DR-REVTTEEGVEFAEKNGLLFIETSAKTSNNVEEAFMKVAEKIYKNIL 173
>gi|440790656|gb|ELR11936.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 126/190 (66%), Gaps = 9/190 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVG--- 57
M + DYL K V++GDS VGKSN++SRF D F SK TIGV FA +N+ V
Sbjct: 1 MNSDASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSN 60
Query: 58 ------DKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELR 111
K +K Q+WDTAGQER+RA++S+YYRGA GAL+VYDIT R + ++ KWL E+
Sbjct: 61 DSTKDCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEID 120
Query: 112 EFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMIN 171
++C+ + + LVGNK DL+ +R V+ EEGK +A E ++F+ETSA N+E AF +I
Sbjct: 121 KYCTQDVVVTLVGNKLDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLIK 180
Query: 172 QIHQTTIQKS 181
+I Q+ + ++
Sbjct: 181 EIIQSNLSQA 190
>gi|147902722|ref|NP_001085321.1| rab2b, member RAS oncogene family [Xenopus laevis]
gi|49257196|gb|AAH71068.1| MGC78967 protein [Xenopus laevis]
gi|83318342|gb|AAI08769.1| MGC78967 protein [Xenopus laevis]
Length = 215
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKPIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFSHLTSWLEDARQHSSSNMVIILIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R+V+ EEG+ A GL FMETSA + NVE+AF+ +I++ IQ+ L
Sbjct: 125 SRRDVSREEGEAFAREHGLIFMETSAKTSANVEEAFIDTAKEIYK-KIQQGL 175
>gi|226479810|emb|CAX73201.1| RAB2, member RAS oncogene family [Schistosoma japonicum]
Length = 213
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 128/212 (60%), Gaps = 5/212 (2%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFTHLTTWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA--KMND 188
R+V +EEG+ A GL FMETSA NVEDAF+ IH + +L + N
Sbjct: 125 SRRDVQKEEGEAFAREHGLVFMETSAKTAANVEDAFINTAKCIHDKIQEGALDVNNEANG 184
Query: 189 KTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ N +GG + N ++ T + CC
Sbjct: 185 IKLGPHHNPVGG---VYNNNNMTNCTSGAGCC 213
>gi|440800473|gb|ELR21511.1| Rab GTPase, putative [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 125/189 (66%), Gaps = 9/189 (4%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVG--- 57
M + DYL K V++GDS VGKSN++SRF D F SK TIGV FA +N+ V
Sbjct: 1 MNSDASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSN 60
Query: 58 ------DKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELR 111
K +K Q+WDTAGQER+RA++S+YYRGA GAL+VYDIT R + ++ KWL E+
Sbjct: 61 DSTKDCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEID 120
Query: 112 EFCSSCMAIVLVGNKSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMIN 171
++C+ + + LVGNK DL+ +R V+ EEGK +A E ++F+ETSA N+E AF +I
Sbjct: 121 KYCTQDVVVTLVGNKLDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLIK 180
Query: 172 QIHQTTIQK 180
+I Q+ + +
Sbjct: 181 EIIQSNLSQ 189
>gi|307110175|gb|EFN58411.1| GTP-binding protein YPTC4 [Chlorella variabilis]
Length = 217
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 112/164 (68%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TFE+ WL + R+ + M I+L+GNK+DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFEHLASWLEDARQHANPNMTIMLIGNKADLG 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
H R V+ EEG+ A+ GL F+ETSA LNVE+AF+ IH
Sbjct: 125 HRRAVSTEEGEQFAKEHGLVFLETSAKTALNVEEAFINTARAIH 168
>gi|56756457|gb|AAW26401.1| SJCHGC06657 protein [Schistosoma japonicum]
Length = 213
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 128/212 (60%), Gaps = 5/212 (2%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFTHLTTWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCA--KMND 188
R+V +EEG+ A GL FMETSA NVEDAF+ IH + +L + N
Sbjct: 125 SRRDVQKEEGEAFAREHGLVFMETSAKTAANVEDAFINTAKCIHDKIQEGALDVNNEANG 184
Query: 189 KTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ N +GG + N ++ T + CC
Sbjct: 185 IKLGPHHNPVGG---VYNNNNMTNRTSGAGCC 213
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 133/213 (62%), Gaps = 14/213 (6%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E DYLFK ++IGDS+VGKS LL RFA D + TIGV+F R + + K +K QIWD
Sbjct: 5 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWD 64
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQERFR ITSSYYRGA G ++VYD+T R +F N K+WL E+ + S + +LVGNK
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQWLSEIDRYASDSVCKLLVGNKC 124
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMN 187
DL S+ V+ EE K AE+ G+ F+ETSA +++NVE AFL M ++I KM
Sbjct: 125 DLVDSKVVDTEEAKAFAESLGMNFLETSAKESINVETAFLTMSSEIKN---------KMA 175
Query: 188 DKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ A + + +++ + +QSSCC
Sbjct: 176 SQPAAERKSTVH-----VHMKGQPIQQQQSSCC 203
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 107/139 (76%)
Query: 3 DSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIK 62
+ Y + DYLFK V+IGDS VGKSNLLSRF DEF ++SK TIGVEFA R I V +K IK
Sbjct: 4 EDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIK 63
Query: 63 AQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVL 122
AQIWDTAGQER+RAITS+YYRGA+GAL+VYDI++ +++EN WL ELRE +A+ L
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGL 123
Query: 123 VGNKSDLTHSREVNEEEGK 141
+GNKSDL H R V +E K
Sbjct: 124 IGNKSDLAHLRAVPTDEAK 142
>gi|17862462|gb|AAL39708.1| LD29476p [Drosophila melanogaster]
Length = 215
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 113/166 (68%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS LL +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 9 NYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 68
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SY+RGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 69 GQERFRAVTRSYHRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 128
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 129 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 174
>gi|307949529|gb|ADN96600.1| Rab GTPase 2d [Euplotes octocarinatus]
Length = 217
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 116/164 (70%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
Y+FK +++GDSAVGKS LL +F F+ TIGVEF R +++ DK IK QIWDTAG
Sbjct: 8 YVFKYIIVGDSAVGKSCLLLQFTDKRFKSTHDLTIGVEFGSRTVQINDKAIKLQIWDTAG 67
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRG++GALLVYD+T+R +FEN +KWL E++E S M +L+GNK DL
Sbjct: 68 QESFRSITRSYYRGSIGALLVYDVTKRQSFENLQKWLEEMKENAYSKMTTILIGNKIDLE 127
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
+ R+V+ EEG+ A+ L F ETSA NVE AFL + +I+
Sbjct: 128 NERQVSYEEGQAFAKKHDLVFFETSAKSAHNVEKAFLAITQKIY 171
>gi|26892279|gb|AAN86142.1|AF468652_1 RAB2B [Homo sapiens]
Length = 216
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R + + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R+V EEG+ A GL FMETSA NVE+AF+ +IH+ IQ+ L
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIHR-KIQQGL 175
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial [Saccoglossus
kowalevskii]
Length = 145
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 106/134 (79%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
+ F V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKAQIWDTAG
Sbjct: 1 FFFVVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 60
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I+LVGNKSDL
Sbjct: 61 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR 120
Query: 131 HSREVNEEEGKILA 144
H R V +E K A
Sbjct: 121 HLRAVPTDEAKAFA 134
>gi|255071631|ref|XP_002499490.1| ras-related gtp-binding rab2-like protein [Micromonas sp. RCC299]
gi|226514752|gb|ACO60748.1| ras-related gtp-binding rab2-like protein [Micromonas sp. RCC299]
Length = 220
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 120/184 (65%), Gaps = 9/184 (4%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R + + D+ IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQHVHDLTIGVEFGSRMVSINDRQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TFE+ WL + R+ + M I+L+GNKSD+
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFEHLSSWLEDARQHANPNMTIMLIGNKSDVA 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
H R+V+ EEG+ A GL F+ETSA + NVE+AF+ + I C K++D
Sbjct: 125 HKRQVSREEGEEFAREHGLVFLETSAKTSDNVEEAFINTASVI---------CEKIDDGL 175
Query: 191 ATSN 194
SN
Sbjct: 176 DVSN 179
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 139/215 (64%), Gaps = 8/215 (3%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E + ++K V+IG+S VGKSNLL RF R+EF + K TIGVEFA R I K I+AQIWD
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWD 63
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQE++RAIT +YYRGA GA+ VYD++++ +F+ ++W+ EL+ C S + I++VGNK+
Sbjct: 64 TAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKA 123
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMN 187
DL REVN +G A+ +F+ETSA++ NVE AF ++ QI+ K A +
Sbjct: 124 DLKQEREVNTSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLLIQIY-----KKKNATLK 178
Query: 188 DKTATSNCNNLGGGKEIINIDHEVTATKQSS--CC 220
+ + S+ N+ +E ++I +A Q CC
Sbjct: 179 NDSVPSD-NSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|324529832|gb|ADY49047.1| Ras-related protein Rab-2, partial [Ascaris suum]
Length = 212
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 132/218 (60%), Gaps = 18/218 (8%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ +S M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL-------- 182
REV +EEG+ A GL FMETSA NVE+AF+ +I++ IQ+ +
Sbjct: 125 ARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYR-KIQEGVFDINNEAN 183
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K+ + + S+ N+ GG + + S+CC
Sbjct: 184 GIKLGPQHSPSSPNSPGGNPAL---------SGSSNCC 212
>gi|221121860|ref|XP_002155452.1| PREDICTED: ras-related protein Rab-2-like [Hydra magnipapillata]
Length = 212
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 131/218 (60%), Gaps = 19/218 (8%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL-------- 182
REV +EEG+ A GL FMETSA NVE+AF+ +I+Q IQ+ +
Sbjct: 125 ARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIGTAKEIYQ-KIQEGVFDINNEAN 183
Query: 183 CAKMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
K+ + +S+ + + GG A +QS C
Sbjct: 184 GIKIGPQHTSSSPSTISGG----------AANQQSGGC 211
>gi|168046616|ref|XP_001775769.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162672921|gb|EDQ59452.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 212
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 113/165 (68%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + +K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ +S M I+L+GNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHANSNMTIMLIGNKCDLA 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
H R V+ EEG+ A+ GL FMETSA NVEDAF+ +I+Q
Sbjct: 125 HRRAVSTEEGEQFAKENGLVFMETSAKTAQNVEDAFINTAAKIYQ 169
>gi|159473897|ref|XP_001695070.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158276449|gb|EDP02222.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 213
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 124/210 (59%), Gaps = 1/210 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ + M I+L+GNK DLT
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLT 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
H R V EEG+ A+ GL F+ETSA NVE+AF+ +I++ IQ + N+
Sbjct: 125 HRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYK-KIQDGVFDVSNESY 183
Query: 191 ATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
G E A K SSCC
Sbjct: 184 GIKVGYGAGNAGPQTVKPGEGGAAKSSSCC 213
>gi|54020781|ref|NP_001005636.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49257826|gb|AAH74632.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89269892|emb|CAJ83496.1| RAB2B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 116/172 (67%), Gaps = 1/172 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKPIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFSHLTSWLEDARQHSSSNMVIILIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R+V+ EEG+ A GL FMETSA NVE+AF+ +I++ IQ+ L
Sbjct: 125 SRRDVSREEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYK-KIQQGL 175
>gi|302846433|ref|XP_002954753.1| RabB/Rab2 [Volvox carteri f. nagariensis]
gi|549811|sp|P36863.1|YPTV4_VOLCA RecName: Full=GTP-binding protein yptV4; AltName: Full=RAB2 homolog
gi|409166|gb|AAA34253.1| GTP-binding protein [Volvox carteri]
gi|300259936|gb|EFJ44159.1| RabB/Rab2 [Volvox carteri f. nagariensis]
Length = 213
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 124/210 (59%), Gaps = 1/210 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ + M I+L+GNK DLT
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLT 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
H R V EEG+ A+ GL F+ETSA NVE+AF+ +I++ IQ + N+
Sbjct: 125 HRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYK-KIQDGVFDVSNESY 183
Query: 191 ATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
G E A K SSCC
Sbjct: 184 GIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213
>gi|298709147|emb|CBJ31092.1| Rab2A, RAB family GTPase [Ectocarpus siliculosus]
Length = 208
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 132/210 (62%), Gaps = 6/210 (2%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + ++ +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + +WL E R+ +S M I+L+GNKSDLT
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLT 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
R V +EG+ AE GL F+ETSA NVE AF++ +I+ ++ + + D T
Sbjct: 125 SRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYD-----NILSGVYDPT 179
Query: 191 ATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
++ LG +N ++ +SSCC
Sbjct: 180 NEAHGIKLGPAAS-LNYNNVAPPADKSSCC 208
>gi|290986392|ref|XP_002675908.1| rab family small GTPase [Naegleria gruberi]
gi|284089507|gb|EFC43164.1| rab family small GTPase [Naegleria gruberi]
Length = 189
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 112/159 (70%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
+CD+L+K V++GDS VGKSNL+ RF ++ F KPTIGVEFA ++I IK QIWD
Sbjct: 3 DCDFLYKVVVLGDSGVGKSNLIIRFTKNIFNTQPKPTIGVEFASKSISYDGATIKGQIWD 62
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQERF A++ Y+RGA GAL+VYDIT + +FE+ +KW E+ + +++GNK
Sbjct: 63 TAGQERFHAVSVQYHRGAHGALMVYDITNKESFEHLEKWFNEISKQGEEGCIYIVIGNKC 122
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAF 166
DL R+V EEEGKI AE L FMETSA+ + NVE+AF
Sbjct: 123 DLAGQRQVTEEEGKIFAEKRNLLFMETSALDSTNVEEAF 161
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 112/144 (77%), Gaps = 1/144 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
MG+ D+E D+LFK V+IGDS VGKSNLLSRF R++F L+SK TIGVEFA R+I+V K
Sbjct: 1 MGNR-DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKT 59
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAI 120
IKAQIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WL+ELR+ + + I
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query: 121 VLVGNKSDLTHSREVNEEEGKILA 144
+ NKSDL H R V +E + A
Sbjct: 120 MPADNKSDLRHLRAVPTDEARAFA 143
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 125/165 (75%), Gaps = 1/165 (0%)
Query: 7 EECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
++ DY +K V+IGDS VGK+N++++F R EF ++K T+GVEFA + + + DK+IKAQ+W
Sbjct: 5 DDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKAQLW 64
Query: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNK 126
DTAGQER+RAI SSYY+GA GAL+V+DIT+++TF+N +W++ ++E S+ ++I+LVGNK
Sbjct: 65 DTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMK-VQESTSNEISIILVGNK 123
Query: 127 SDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMIN 171
SDL H R+V+ + A + F+ETSA NV +AF ++IN
Sbjct: 124 SDLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLIN 168
>gi|350534852|ref|NP_001232642.1| putative RAB14 member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128799|gb|ACH45297.1| putative RAB14 member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 215
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 113/172 (65%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
Y+FK ++IGD VGKS LL +FA +F D TIGVEF R I V + IK QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFAEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I+L+GNK+DL
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE 129
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R+V EE K AE GL F+E SA NVEDAFL+ +I+Q SL
Sbjct: 130 AQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSL 181
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 1 MGDSYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKL 60
M + DEE DYLFK V++GDS VGKSNLLSRF R+ F L++K TIGVEFA R++ + K
Sbjct: 1 MSNPRDEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKK 60
Query: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCS-SCMA 119
IKA IWDTAGQER+RAIT +YYRGALG L+VYDI + TF+N +WL+ELR S ++
Sbjct: 61 IKATIWDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNIS 120
Query: 120 IVLVGNKSDLTHSREVNEEEGKILAETEGLYFM 152
I+LVGNK+DL H R V +E I A+ + F+
Sbjct: 121 IMLVGNKTDLRHLRAVPTQEAAIYADRNHMSFI 153
>gi|340500662|gb|EGR27525.1| Ras-related protein ric2, putative [Ichthyophthirius multifiliis]
Length = 235
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYL K V++GDS VGKSN+LSRF RD+F++D+ TIGVEF R I +K+I+ QIWDTA
Sbjct: 35 DYLIKIVLVGDSGVGKSNILSRFTRDQFQIDNCSTIGVEFGQRIITTENKIIQTQIWDTA 94
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
G E+F++IT ++RGALG LL+YDIT++A+F+ +K +++++ I+LVGNK+D+
Sbjct: 95 GTEKFQSITQQFFRGALGVLLIYDITKQASFQQCEKLFQQIKDNVEDHTQILLVGNKTDI 154
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDK 189
++ R V+++EG A+T + F+E SA++N+N++ AF+ ++ QI++ QKS DK
Sbjct: 155 SNLRTVSKQEGLEFAKTHKIQFIEVSALENINIDQAFMIVVQQIYELC-QKSYVTVETDK 213
>gi|209881440|ref|XP_002142158.1| Rab2 GTPase protein [Cryptosporidium muris RN66]
gi|209557764|gb|EEA07809.1| Rab2 GTPase protein, putative [Cryptosporidium muris RN66]
Length = 214
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 118/169 (69%), Gaps = 1/169 (0%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
DYLFK ++IGD+AVGKS LL +F FR+D TIGVEF R + + K IK QIWDTA
Sbjct: 6 DYLFKYIIIGDTAVGKSCLLLQFTDHRFRIDHDLTIGVEFGARVVNIDSKQIKLQIWDTA 65
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQE FR+IT SYYRGA GALLVYDI+RR TF + +WL E+++ + M I+L+GNKSDL
Sbjct: 66 GQESFRSITRSYYRGAAGALLVYDISRRETFNHLGRWLSEVKKNAAPYMTIMLIGNKSDL 125
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTI 178
REV EEG A+ GL F+ETSA NVE+AF++ +I++ +
Sbjct: 126 -ERREVTTEEGSQFAQQNGLIFLETSAKTAHNVEEAFVKTAEKIYKNIL 173
>gi|164612813|gb|ABY63655.1| Rab GTPase 2a [Euplotes octocarinatus]
Length = 222
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 111/158 (70%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F FR TIGVEF R + + + IK QIWDTAG
Sbjct: 6 YLFKYIIIGDTGVGKSCLLLQFTDKRFRTQHDLTIGVEFGARAVEINGETIKLQIWDTAG 65
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE F++IT SYYRGA GALLVYDITRR TF + WL E+R+ +S M I+L+GNKSDL
Sbjct: 66 QESFKSITRSYYRGAAGALLVYDITRRETFNHISTWLDEVRQNGNSDMVIILIGNKSDLD 125
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQ 168
R+V+ EEGK A+ L FMETSA + NVEDAFL+
Sbjct: 126 SKRQVSTEEGKSFAKENNLIFMETSAKNSTNVEDAFLE 163
>gi|2500074|sp|Q39570.1|YPTC4_CHLRE RecName: Full=GTP-binding protein YPTC4
gi|806722|gb|AAA82726.1| YptC4 [Chlamydomonas reinhardtii]
Length = 213
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 124/210 (59%), Gaps = 1/210 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ + M I+L+GNK DLT
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLT 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
H R V EEG+ A+ GL F+ETSA NVE+AF+ +I++ IQ + N+
Sbjct: 125 HRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYK-KIQDGVFDVSNESY 183
Query: 191 ATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
G E A K SSCC
Sbjct: 184 GIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 138/215 (64%), Gaps = 8/215 (3%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E + ++K V+IG+S VGKSNLL RF R+EF + K TIGVEFA R I K I+AQIWD
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWD 63
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQE++RAIT +YYRGA GA+ VYD++++ +F+ ++W+ EL+ C S + I++VGNK+
Sbjct: 64 TAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKA 123
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMN 187
DL REVN +G A+ +F+ETSA+ NVE AF ++ QI+ K A +
Sbjct: 124 DLKQEREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIY-----KKKNATLK 178
Query: 188 DKTATSNCNNLGGGKEIINIDHEVTATKQSS--CC 220
+ + S+ N+ +E ++I +A Q CC
Sbjct: 179 NDSVPSD-NSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|195579198|ref|XP_002079449.1| GD23961 [Drosophila simulans]
gi|194191458|gb|EDX05034.1| GD23961 [Drosophila simulans]
Length = 239
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 112/166 (67%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
+Y+FK ++IGD VGKS L +F +F + TIGVEF R I V DK IK QIWDTA
Sbjct: 33 NYIFKYIIIGDMGVGKSCLRHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTA 92
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + R + I L+GNKSDL
Sbjct: 93 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDL 152
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
+REV EE K A+ GL F+E SAM NVE+AFL+ +I+Q
Sbjct: 153 ESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQ 198
>gi|168061692|ref|XP_001782821.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162665723|gb|EDQ52398.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 113/165 (68%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R + + +K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ +S M I+L+GNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKCDLA 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
H R V+ EEG+ A+ GL FMETSA NVEDAF+ +I+Q
Sbjct: 125 HRRAVSTEEGEQFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQ 169
>gi|145525673|ref|XP_001448653.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834495|emb|CAI44562.1| rab_A44 [Paramecium tetraurelia]
gi|124416208|emb|CAK81256.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 120/170 (70%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
++E YLFK ++IGDS VGK+NL +R EF+ D++PTIGVEF R +R L+K QI
Sbjct: 3 EDEFSYLFKIILIGDSGVGKTNLFNRLQNKEFQYDTRPTIGVEFINRTVRQDGNLVKCQI 62
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQE+FRAIT++YYRGA G + YD+T++ T+E+T +W+ E+++F + I+LVGN
Sbjct: 63 WDTAGQEKFRAITNAYYRGAKGVFVCYDVTKQGTYESTLRWMSEIKQFGDHDIVIMLVGN 122
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
K DL R V +E E + ++ETSA+ N+NVE AF QM+ +I++
Sbjct: 123 KIDLAEQRIVRTDEVSQFCEQNKVGYIETSALNNINVEMAFNQMVTEIYK 172
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 133/216 (61%), Gaps = 11/216 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+ E DYLFK ++IGDS VGKS LL RFA D + D TIGV+F R I + K IK QI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFR ITSSYYRGA G ++VYD+T + +F N K+WL+E+ + + + +LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGN 121
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL+ + V K A+ + F+ETSA+ + NVE AF M QI A+
Sbjct: 122 KADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIK---------AQ 172
Query: 186 MNDKTATSNCNNLGGGKEIINIDHE-VTATKQSSCC 220
M T + N N GK +N+ E +T+ + +SCC
Sbjct: 173 MTSNTNSGNAGN-AKGKSNVNLRGESLTSNQSNSCC 207
>gi|323449327|gb|EGB05216.1| hypothetical protein AURANDRAFT_31216 [Aureococcus anophagefferens]
Length = 208
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 120/178 (67%), Gaps = 1/178 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ + TIGVEF R + + D+ +K QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARLVGIDDRQVKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYD+TRR TF + +WL E R ++ M ++L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDVTRRETFNHLTRWLEEARHNANTEMVVMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMND 188
H R V+ +EG A GL FMETSA NVE AF+Q ++I++ IQK + ND
Sbjct: 125 HRRAVSTKEGADFAARNGLIFMETSAKTARNVEGAFIQTAHKIYE-NIQKGVYDVTND 181
>gi|242006346|ref|XP_002424012.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507304|gb|EEB11274.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 130
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/127 (67%), Positives = 104/127 (81%)
Query: 4 SYDEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKA 63
S D+E DYLFK V+IGDS VGKSNLLSRF R+EF L+SK TIGVEFA R+I+V K IKA
Sbjct: 3 SRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 62
Query: 64 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLV 123
QIWDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN ++WLRELR+ + I+LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
Query: 124 GNKSDLT 130
GNK + +
Sbjct: 123 GNKREYS 129
>gi|168049241|ref|XP_001777072.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671515|gb|EDQ58065.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 113/165 (68%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R + + +K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ +S M I+L+GNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKCDLA 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
H R V+ EEG+ A+ GL FMETSA NVEDAF+ +I+Q
Sbjct: 125 HRRAVSTEEGERFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQ 169
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 120/168 (71%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E + ++K V+IG+S VGKSNLL RF R+EF + K TIGVEFA R I K I+AQIWD
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWD 63
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQE++RAIT +YYRGA GA+ VYD++++ +F+ ++W+ EL+ C S + I++VGNK+
Sbjct: 64 TAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKA 123
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
DL REVN +G A+ +F+ETSA+ NVE AF ++ QI++
Sbjct: 124 DLKQEREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK 171
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRV-GDKLIKAQIWDTA 69
Y FK V++GDS VGKSNL+ RF ++EF DSK TIGVEFA + +++ DKL+KAQIWDTA
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTA 60
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQER+R+I SSYYRGA+GALLVYD+T R +F + WL+E+ E I+LVGNK DL
Sbjct: 61 GQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDL 120
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQK 180
R V +G+ A GL F+ETSA+ V+ AF +++ +I++T +K
Sbjct: 121 HEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKK 171
>gi|145533477|ref|XP_001452483.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 121/169 (71%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+E+ D L K +++GDS VGK+NL++RFA+ +F DSKPT+GVEF +R+I + K IKAQ+
Sbjct: 4 EEDYDILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQV 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQE+FRAIT YYRGALGA++ YDIT+ +F N ++W+ ELRE S + ++L+G
Sbjct: 64 WDTAGQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGT 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIH 174
KSDL R V E+G A + F+ETSA++ NV AF ++ +I+
Sbjct: 124 KSDLESKRVVRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLLEKIY 172
>gi|89258411|gb|ABD65429.1| Rab2 [Suberites domuncula]
Length = 214
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF++ WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFDHLTTWLEDARQHSSSNMVIMLIGNKSDLD 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
REV EEG A+ GL FMETSA NVE+AF+ +I+ T IQ +
Sbjct: 125 AKREVKSEEGLAFAKEHGLVFMETSAKTAANVEEAFINTAKEIY-TKIQDGV 175
>gi|323445864|gb|EGB02268.1| hypothetical protein AURANDRAFT_35409 [Aureococcus anophagefferens]
Length = 210
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 131/211 (62%), Gaps = 6/211 (2%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ + TIGVEF R + + ++ IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARMVAIDERQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + +WL E R+ +S M ++L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMVVMLIGNKSDLG 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAKMNDKT 190
H R V+ +EG+ A GL FMETSA + NVE AF+ + IH+ ++ A + D T
Sbjct: 125 HRRAVSTDEGEEFARKNGLVFMETSAKTSSNVERAFIDTASTIHE-----NITAGVFDVT 179
Query: 191 ATSNCNNLG-GGKEIINIDHEVTATKQSSCC 220
S +G E+ N + +CC
Sbjct: 180 NESLGIKVGVASSELPNSSSTAGSYAHKNCC 210
>gi|168022844|ref|XP_001763949.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162684954|gb|EDQ71353.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 113/165 (68%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R + + +K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIENKPIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ +S M I+L+GNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKCDLA 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
H R V+ EEG+ A+ GL FMETSA NVEDAF+ +I+Q
Sbjct: 125 HRRAVSTEEGEQFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQ 169
>gi|17568765|ref|NP_510572.1| Protein RAB-14 [Caenorhabditis elegans]
gi|3878422|emb|CAB01884.1| Protein RAB-14 [Caenorhabditis elegans]
Length = 210
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 112/172 (65%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
Y+FK ++IGD VGKS LL +F +F D TIGVEF R I V + IK QIWDTAG
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + + + AI L+GNK+DL
Sbjct: 70 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLE 129
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R+V EE K AE GL F+E SA NVEDAFL+ QI+Q SL
Sbjct: 130 DQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQDGSL 181
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 132/216 (61%), Gaps = 11/216 (5%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+ E DYLFK ++IGDS VGKS LL RFA D + D TIGV+F R I + K IK QI
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQERFR ITSSYYRGA G ++VYD+T + +F N K+WL+E+ + + + +LVGN
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGN 121
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSLCAK 185
K+DL+ + V K A+ + F+ETSA+ + NVE AF M QI A+
Sbjct: 122 KADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIK---------AQ 172
Query: 186 MNDKTATSNCNNLGGGKEIINIDHEVTATKQS-SCC 220
M + N +N GK +N+ E A+ QS SCC
Sbjct: 173 MTNNANAGNVSN-AKGKSNVNLRGESLASNQSNSCC 207
>gi|66823707|ref|XP_645208.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122057917|sp|Q559X6.1|RAB2B_DICDI RecName: Full=Ras-related protein Rab-2B
gi|60473275|gb|EAL71221.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 117/164 (71%)
Query: 10 DYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTA 69
++LFK +M+GDSAVGKSNLL +F F +S TIGVEF R+I + DK IK QIWDTA
Sbjct: 22 EHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTA 81
Query: 70 GQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDL 129
GQE+FR+IT +YYRGA+ A++VYDITRR +FE+ WL + R+F S + VL+GNK+DL
Sbjct: 82 GQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADL 141
Query: 130 THSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQI 173
+R+V+ E K AE GL F ETSA LNV++AF + QI
Sbjct: 142 EANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQI 185
>gi|83415090|ref|NP_001032734.1| ras-related protein Rab-2B [Rattus norvegicus]
gi|77567746|gb|AAI07444.1| RAB2B, member RAS oncogene family [Rattus norvegicus]
gi|149033676|gb|EDL88474.1| rCG61209, isoform CRA_a [Rattus norvegicus]
gi|149033677|gb|EDL88475.1| rCG61209, isoform CRA_a [Rattus norvegicus]
Length = 215
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R + + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R+V EEG+ A GL FMETSA NVE+A++ +IH+ IQ+ L
Sbjct: 125 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIHR-KIQQGL 175
>gi|74096301|ref|NP_001027632.1| GTP-binding protein rab-2 homologue [Ciona intestinalis]
gi|28556900|dbj|BAC57527.1| GTP-binding protein rab-2 homologue [Ciona intestinalis]
Length = 176
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 115/172 (66%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + + IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGRQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
REV +EEG+ A GL FMETSA NVE+AF+ +I++ + SL
Sbjct: 125 ARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYEKNTRGSL 176
>gi|399163157|gb|AFP33154.1| rab-14, partial [Caenorhabditis elegans]
Length = 209
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 112/172 (65%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
Y+FK ++IGD VGKS LL +F +F D TIGVEF R I V + IK QIWDTAG
Sbjct: 9 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 68
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QERFRA+T SYYRGA GAL+VYDITRR+T+ + WL + + + AI L+GNK+DL
Sbjct: 69 QERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLE 128
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL 182
R+V EE K AE GL F+E SA NVEDAFL+ QI+Q SL
Sbjct: 129 DQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQDGSL 180
>gi|156371397|ref|XP_001628750.1| predicted protein [Nematostella vectensis]
gi|156215735|gb|EDO36687.1| predicted protein [Nematostella vectensis]
Length = 212
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 112/165 (67%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
R+V +EEG+ A GL FMETSA NVE+AF+ +I+Q
Sbjct: 125 ARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQ 169
>gi|72078956|ref|XP_782537.1| PREDICTED: ras-related protein Rab-2A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 212
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 112/165 (67%)
Query: 11 YLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAG 70
YLFK ++IGD+ VGKS LL +F F+ TIGVEF R I + K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAG 64
Query: 71 QERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKSDLT 130
QE FR+IT SYYRGA GALLVYDITRR TF + WL + R+ SS M I+L+GNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSDLE 124
Query: 131 HSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQ 175
R+V +EEG+ A GL FMETSA NVE+AF+ +I+Q
Sbjct: 125 ARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQ 169
>gi|66807211|ref|XP_637328.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122086021|sp|Q54KM9.1|RB11B_DICDI RecName: Full=Ras-related protein Rab-11B
gi|2708641|gb|AAB92559.1| GTPase rab11b [Dictyostelium discoideum]
gi|60465730|gb|EAL63807.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 220
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 122/172 (70%)
Query: 8 ECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWD 67
E DYL K V+IGDS VGKSNLLSR+ ++EF + TIGVEF+ + +++ +KLIK Q+WD
Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWD 66
Query: 68 TAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGNKS 127
TAGQE++ +IT SYY+GA+GAL+VY+I R +F N +KWL++ RE I+LVGNKS
Sbjct: 67 TAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKS 126
Query: 128 DLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQ 179
DL REV+ EGK AE + F+ETSA+ + NVE AF + N I+ + +
Sbjct: 127 DLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIYYSLFK 178
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 138/216 (63%), Gaps = 22/216 (10%)
Query: 6 DEECDYLFKAVMIGDSAVGKSNLLSRFARDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
+E+ DY+FK V+IGDSAVGK+ +LSRF+++E + + K+IKAQI
Sbjct: 20 EEKIDYVFKVVVIGDSAVGKTQILSRFSKNE----------------TVTINGKVIKAQI 63
Query: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENTKKWLRELREFCSSCMAIVLVGN 125
WDTAGQER+RA+TS+YYRGALGA+LVYDIT+R +F++ KW+ ELR + + I+LVGN
Sbjct: 64 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIMLVGN 123
Query: 126 KSDLTHSREVNEEEGKILAETEGLYFMETSAMQNLNVEDAFLQMINQIHQTTIQKSL-CA 184
K DL R V E+ AE +GL+F ETSA+ +NVE AF++++ +I+ +K+L C
Sbjct: 124 KGDLVDLRMVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEINSVVSKKALECG 183
Query: 185 KMNDKTATSNCNNLGGGKEIINIDHEVTATKQSSCC 220
+ + ++ G E+ E++ K+ S C
Sbjct: 184 NVKGIALKGSKIDVISGAEL-----EISEIKKLSSC 214
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,144,544,664
Number of Sequences: 23463169
Number of extensions: 115661191
Number of successful extensions: 348130
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16343
Number of HSP's successfully gapped in prelim test: 7974
Number of HSP's that attempted gapping in prelim test: 311043
Number of HSP's gapped (non-prelim): 25127
length of query: 222
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 85
effective length of database: 9,144,741,214
effective search space: 777303003190
effective search space used: 777303003190
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)