Your job contains 1 sequence.
>027509
MASHDHHTHDHAHHHHHDNDHDHTHEKNHGDSTATSWVGSDGRVYHSHDGLAPHSHEPIY
SPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFT
KEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADLLLCESGG
DNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027509
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040894 - symbol:UREG "AT2G34470" species:3702... 942 1.1e-94 1
UNIPROTKB|G4NCH0 - symbol:MGG_01086 "Uncharacterized prot... 649 3.7e-68 2
POMBASE|SPCPB16A4.05c - symbol:SPCPB16A4.05c "urease acce... 628 2.6e-63 2
ASPGD|ASPL0000062920 - symbol:ureD species:162425 "Emeric... 644 4.2e-63 1
UNIPROTKB|Q48DC7 - symbol:ureG "Urease accessory protein ... 490 8.8e-47 1
UNIPROTKB|P18319 - symbol:ureG "Urease accessory protein ... 459 1.7e-43 1
UNIPROTKB|P0A664 - symbol:ureG "Urease accessory protein ... 449 1.9e-42 1
TIGR_CMR|SPO_1717 - symbol:SPO_1717 "urease accessory pro... 426 5.3e-40 1
TIGR_CMR|CJE_0726 - symbol:CJE_0726 "hydrogenase accessor... 106 0.00075 1
>TAIR|locus:2040894 [details] [associations]
symbol:UREG "AT2G34470" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IEA] [GO:0016151 "nickel cation binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=ISS] [GO:0006807 "nitrogen
compound metabolic process" evidence=IMP] [GO:0048554 "positive
regulation of metalloenzyme activity" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] HAMAP:MF_01389 InterPro:IPR004400
InterPro:IPR012202 PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005524
GO:GO:0005737 EMBL:CP002685 GO:GO:0016020 GO:GO:0003924
GO:GO:0006807 GO:GO:0016151 GO:GO:0048554 InterPro:IPR003495
GO:GO:0016530 TIGRFAMs:TIGR00101 KO:K03189 OMA:LCKAMRE
UniGene:At.48549 UniGene:At.60259 IPI:IPI00656728
RefSeq:NP_001031481.1 ProteinModelPortal:F4IHW4 SMR:F4IHW4
PRIDE:F4IHW4 EnsemblPlants:AT2G34470.2 GeneID:818010
KEGG:ath:AT2G34470 PhylomeDB:F4IHW4 Uniprot:F4IHW4
Length = 276
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 178/195 (91%), Positives = 185/195 (94%)
Query: 27 KNHGDSTATSWVGSDGRVYHSHDGLAPHSHEPIYSPGYFSRRAPPILSRNFNERAFTVGI 86
K+ G SWVG DG+VYHSHDGLAPHSHEPIYSPGYFSRRAPP+ RNF+ERAFTVGI
Sbjct: 20 KSDGGEGKASWVGKDGKVYHSHDGLAPHSHEPIYSPGYFSRRAPPLHDRNFSERAFTVGI 79
Query: 87 GGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGC 146
GGPVGTGKTALMLALC+FLRDKYSLAAVTNDIFTKEDGEFL++NGALPEERIRAVETGGC
Sbjct: 80 GGPVGTGKTALMLALCRFLRDKYSLAAVTNDIFTKEDGEFLVKNGALPEERIRAVETGGC 139
Query: 147 PHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDK 206
PHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIIDVS GDK
Sbjct: 140 PHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYIIYIIDVSAGDK 199
Query: 207 IPRKGGPGITQADLL 221
IPRKGGPGITQADLL
Sbjct: 200 IPRKGGPGITQADLL 214
>UNIPROTKB|G4NCH0 [details] [associations]
symbol:MGG_01086 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_01389 InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005524 GO:GO:0005737
EMBL:CM001235 GO:GO:0003924 GO:GO:0016151 InterPro:IPR003495
GO:GO:0016530 TIGRFAMs:TIGR00101 KO:K03189 RefSeq:XP_003717851.1
ProteinModelPortal:G4NCH0 EnsemblFungi:MGG_01086T0 GeneID:2674150
KEGG:mgr:MGG_01086 Uniprot:G4NCH0
Length = 277
Score = 649 (233.5 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 131/184 (71%), Positives = 146/184 (79%)
Query: 46 HSHDGLA------PHSHEPIYSPG-YFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALM 98
HSHDG HSHE + PG Y R P + R+F+ERAFT+GIGGPVG+GKTALM
Sbjct: 15 HSHDGSTFNAQEHGHSHEILTGPGSYLGREMPIVEGRDFSERAFTIGIGGPVGSGKTALM 74
Query: 99 LALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISIN 158
LALC LRD +SLAAVTNDIFT+ED EFL RN ALP RIRA+ETGGCPHAA+REDIS N
Sbjct: 75 LALCLALRDTHSLAAVTNDIFTREDAEFLTRNKALPPSRIRAIETGGCPHAAVREDISAN 134
Query: 159 LGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQ 217
L LE+L F DLLL ESGGDNLAAN+SRELAD+IIY+IDVSGGDKIPRKGGPGITQ
Sbjct: 135 LACLEDLHRTFNGVDLLLIESGGDNLAANYSRELADFIIYVIDVSGGDKIPRKGGPGITQ 194
Query: 218 ADLL 221
+DLL
Sbjct: 195 SDLL 198
Score = 61 (26.5 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 10/11 (90%), Positives = 10/11 (90%)
Query: 46 HSHDGLAPHSH 56
HSHDG APHSH
Sbjct: 5 HSHDGSAPHSH 15
>POMBASE|SPCPB16A4.05c [details] [associations]
symbol:SPCPB16A4.05c "urease accessory protein UREG
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0016151
"nickel cation binding" evidence=IEA] [GO:0016530 "metallochaperone
activity" evidence=IEA] [GO:0019627 "urea metabolic process"
evidence=ISM] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 PomBase:SPCPB16A4.05c Pfam:PF02492 GO:GO:0005525
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329672
GO:GO:0003924 GO:GO:0016151 InterPro:IPR003495 GO:GO:0019627
GO:GO:0016530 eggNOG:COG0378 TIGRFAMs:TIGR00101
HOGENOM:HOG000236979 KO:K03189 RefSeq:NP_588029.1
ProteinModelPortal:Q96WV0 STRING:Q96WV0 PRIDE:Q96WV0
EnsemblFungi:SPCPB16A4.05c.1 GeneID:2538808 KEGG:spo:SPCPB16A4.05c
OMA:HILQAWE OrthoDB:EOG47H8ZZ NextBio:20799990 Uniprot:Q96WV0
Length = 286
Score = 628 (226.1 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 118/169 (69%), Positives = 142/169 (84%)
Query: 54 HSHEPIYSPG-YFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLA 112
HSH+ + +PG Y R P R+F+ RAFT+G+GGPVG+GKTAL+L LC+ L +KYS+
Sbjct: 58 HSHDAMETPGSYLKRELPQFNHRDFSRRAFTIGVGGPVGSGKTALLLQLCRLLGEKYSIG 117
Query: 113 AVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKAD 172
VTNDIFT+ED EFL+RN ALPEERIRA+ETGGCPHAAIRED+S NL LEEL + F +
Sbjct: 118 VVTNDIFTREDQEFLIRNKALPEERIRAIETGGCPHAAIREDVSGNLVALEELQSEFNTE 177
Query: 173 LLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLL 221
LLL ESGGDNLAAN+SR+LAD+IIY+IDVSGGDKIPRKGGPGIT++DLL
Sbjct: 178 LLLVESGGDNLAANYSRDLADFIIYVIDVSGGDKIPRKGGPGITESDLL 226
Score = 36 (17.7 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 46 HSHDGLAPHSHE 57
H H G HSH+
Sbjct: 27 HDHHGHDHHSHD 38
Score = 35 (17.4 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 39 GSDGRVYH-SHDGLAPHSHE 57
GSD +H +HD H+H+
Sbjct: 10 GSDDSTHHHTHD-YDHHNHD 28
>ASPGD|ASPL0000062920 [details] [associations]
symbol:ureD species:162425 "Emericella nidulans"
[GO:0043419 "urea catabolic process" evidence=IMP] [GO:0009039
"urease activity" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016151 "nickel cation binding" evidence=IEA]
HAMAP:MF_01389 InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005524 GO:GO:0005737
EMBL:BN001308 GO:GO:0003924 GO:GO:0016151 InterPro:IPR003495
EMBL:AACD01000005 GO:GO:0016530 eggNOG:COG0378 TIGRFAMs:TIGR00101
HOGENOM:HOG000236979 KO:K03189 OMA:LCKAMRE OrthoDB:EOG47H8ZZ
RefSeq:XP_657836.1 ProteinModelPortal:Q5BGU8 STRING:Q5BGU8
EnsemblFungi:CADANIAT00002494 GeneID:2876005 KEGG:ani:AN0232.2
Uniprot:Q5BGU8
Length = 266
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 124/179 (69%), Positives = 149/179 (83%)
Query: 46 HSHDGLAPH--SHEPIYSPG-YFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALC 102
HSHD +A H SHE + PG Y +R P I R++++RAFT+GIGGPVG+GKTALMLALC
Sbjct: 9 HSHDNIADHGHSHEILDGPGSYLNREQPLIEDRDWSDRAFTIGIGGPVGSGKTALMLALC 68
Query: 103 KFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPL 162
+ LRD+Y++AAVTNDIFT+ED EFL RN AL +RIRA+ETGGCPHAA+REDIS NL L
Sbjct: 69 RALRDEYNIAAVTNDIFTREDAEFLTRNKALSPDRIRAIETGGCPHAAVREDISANLLAL 128
Query: 163 EELSNLFKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLL 221
+ L F+ DLLL ESGGDNLAAN+SRELAD+IIY+IDV+GGDK+PRKGGPGIT +DLL
Sbjct: 129 QNLHRQFQTDLLLIESGGDNLAANYSRELADFIIYVIDVAGGDKVPRKGGPGITGSDLL 187
>UNIPROTKB|Q48DC7 [details] [associations]
symbol:ureG "Urease accessory protein UreG" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0016530
"metallochaperone activity" evidence=ISS] HAMAP:MF_01389
InterPro:IPR004400 InterPro:IPR012202 PIRSF:PIRSF005624
Pfam:PF02492 GO:GO:0005525 GO:GO:0005524 GO:GO:0005737
GO:GO:0003924 EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0016151
InterPro:IPR003495 GO:GO:0016530 eggNOG:COG0378 TIGRFAMs:TIGR00101
HOGENOM:HOG000236979 KO:K03189 OMA:LCKAMRE RefSeq:YP_276614.1
ProteinModelPortal:Q48DC7 STRING:Q48DC7 GeneID:3555490
KEGG:psp:PSPPH_4498 PATRIC:19978495 ProtClustDB:CLSK868971
Uniprot:Q48DC7
Length = 205
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 95/145 (65%), Positives = 116/145 (80%)
Query: 78 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEER 137
N + VGIGGPVG+GKTAL LALC LRD+Y+LA VTNDI+T+ED +FL+RN AL ER
Sbjct: 2 NSQPLRVGIGGPVGSGKTALTLALCLALRDRYNLAVVTNDIYTREDADFLVRNEALAPER 61
Query: 138 IRAVETGGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYII 196
I VETGGCPH AIRED SINL +++L+ F+ DL++ ESGGDNL+A FS EL+D I
Sbjct: 62 IIGVETGGCPHTAIREDASINLEAVDQLNRRFEGLDLIIVESGGDNLSATFSPELSDLTI 121
Query: 197 YIIDVSGGDKIPRKGGPGITQADLL 221
Y+IDVS GDK+PRKGGPGI ++DLL
Sbjct: 122 YVIDVSAGDKLPRKGGPGICKSDLL 146
>UNIPROTKB|P18319 [details] [associations]
symbol:ureG "Urease accessory protein UreG" species:548
"Enterobacter aerogenes" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_01389 InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005525 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016151 InterPro:IPR003495
GO:GO:0016530 EMBL:M36068 ProteinModelPortal:P18319
TIGRFAMs:TIGR00101 Uniprot:P18319
Length = 205
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 92/147 (62%), Positives = 108/147 (73%)
Query: 76 NFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPE 135
N + VG+GGPVG+GKTAL+ ALCK +RD + LA VTNDI+TKED L GAL
Sbjct: 2 NSYKHPLRVGVGGPVGSGKTALLEALCKAMRDTWQLAVVTNDIYTKEDQRILTEAGALAP 61
Query: 136 ERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADY 194
ERI VETGGCPH AIRED S+NL +E LS F DL+ ESGGDNL+A FS ELAD
Sbjct: 62 ERIVGVETGGCPHTAIREDASMNLAAVEALSEKFGNLDLIFVESGGDNLSATFSPELADL 121
Query: 195 IIYIIDVSGGDKIPRKGGPGITQADLL 221
IY+IDV+ G+KIPRKGGPGIT++D L
Sbjct: 122 TIYVIDVAEGEKIPRKGGPGITKSDFL 148
>UNIPROTKB|P0A664 [details] [associations]
symbol:ureG "Urease accessory protein UreG" species:1773
"Mycobacterium tuberculosis" [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
HAMAP:MF_01389 InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005525 GO:GO:0005524
GO:GO:0005737 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0003924 EMBL:BX842578 GO:GO:0016151
InterPro:IPR003495 GO:GO:0016530 eggNOG:COG0378 EMBL:U33011
TIGRFAMs:TIGR00101 PIR:D70665 RefSeq:NP_216368.1 RefSeq:NP_336357.1
RefSeq:YP_006515252.1 ProteinModelPortal:P0A664 SMR:P0A664
PRIDE:P0A664 EnsemblBacteria:EBMYCT00000002943
EnsemblBacteria:EBMYCT00000070999 GeneID:13316643 GeneID:885729
GeneID:923708 KEGG:mtc:MT1900 KEGG:mtu:Rv1852 KEGG:mtv:RVBD_1852
PATRIC:18125941 TubercuList:Rv1852 HOGENOM:HOG000236979 KO:K03189
OMA:LCKAMRE ProtClustDB:CLSK871974 Uniprot:P0A664
Length = 224
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 93/177 (52%), Positives = 119/177 (67%)
Query: 46 HSHDGLAPHSHEPIYSPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFL 105
HSH PHSH P + P+ +G+GGPVG+GKTAL+ ALC+ L
Sbjct: 4 HSH----PHSHTVPARPRRVRKPGEPL----------RIGVGGPVGSGKTALVAALCRQL 49
Query: 106 RDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEEL 165
R + SLA +TNDI+T ED +FL + LP++RI AV+TGGCPH AIR+DI+ NL ++EL
Sbjct: 50 RGELSLAVLTNDIYTTEDADFLRTHAVLPDDRIAAVQTGGCPHTAIRDDITANLDAIDEL 109
Query: 166 SNLFKA-DLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLL 221
A DL+L ESGGDNL A FS L D I++IDV+GGDK+PRKGGPG+T +DLL
Sbjct: 110 MAAHDALDLILVESGGDNLTATFSSGLVDAQIFVIDVAGGDKVPRKGGPGVTYSDLL 166
>TIGR_CMR|SPO_1717 [details] [associations]
symbol:SPO_1717 "urease accessory protein UreG"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0019627 "urea
metabolic process" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=ISS] HAMAP:MF_01389 InterPro:IPR004400 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0005525 GO:GO:0005524
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924
GO:GO:0016151 InterPro:IPR003495 GO:GO:0016530 eggNOG:COG0378
TIGRFAMs:TIGR00101 HOGENOM:HOG000236979 KO:K03189 OMA:LCKAMRE
RefSeq:YP_166956.1 ProteinModelPortal:Q5LSP9 DNASU:3193533
GeneID:3193533 KEGG:sil:SPO1717 PATRIC:23376757
ProtClustDB:CLSK933615 Uniprot:Q5LSP9
Length = 215
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 82/139 (58%), Positives = 104/139 (74%)
Query: 84 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVET 143
VGIGGPVG GKT L AL + LRD +S+ +TNDI+T+ED E LMR LP++RI VET
Sbjct: 10 VGIGGPVGAGKTTLTAALSEALRDSHSIGVITNDIYTREDAEALMRLQILPQDRIIGVET 69
Query: 144 GGCPHAAIREDISINLGPLEELSNLFKA-DLLLCESGGDNLAANFSRELADYIIYIIDVS 202
GGCPH AIRED SINL + E+ +++L ESGGDNL+A FS ELAD +Y+IDV+
Sbjct: 70 GGCPHTAIREDASINLAAVAEMERRHPGIEIILIESGGDNLSATFSPELADVTLYVIDVA 129
Query: 203 GGDKIPRKGGPGITQADLL 221
G++IPRKGGP IT++D+L
Sbjct: 130 AGEEIPRKGGPAITKSDIL 148
>TIGR_CMR|CJE_0726 [details] [associations]
symbol:CJE_0726 "hydrogenase accessory protein HypB"
species:195099 "Campylobacter jejuni RM1221" [GO:0000166
"nucleotide binding" evidence=ISS] [GO:0006464 "cellular protein
modification process" evidence=ISS] [GO:0016530 "metallochaperone
activity" evidence=ISS] InterPro:IPR004392 InterPro:IPR012202
PIRSF:PIRSF005624 Pfam:PF02492 GO:GO:0006461 GO:GO:0003924
GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0016151
InterPro:IPR003495 eggNOG:COG0378 HOGENOM:HOG000236980 KO:K04652
TIGRFAMs:TIGR00073 OMA:QACHLDA RefSeq:YP_178737.1
ProteinModelPortal:Q5HVE8 STRING:Q5HVE8 GeneID:3231952
KEGG:cjr:CJE0726 PATRIC:20043181 ProtClustDB:CLSK871679
BioCyc:CJEJ195099:GJC0-743-MONOMER Uniprot:Q5HVE8
Length = 247
Score = 106 (42.4 bits), Expect = 0.00075, P = 0.00075
Identities = 48/189 (25%), Positives = 81/189 (42%)
Query: 46 HSHDGLAPHSHE-PIYSPGYFSRRAPPILSRN----------FNE-RAFTVGIGGPVGTG 93
H+H H HE P G ILS+N FNE + + G+G
Sbjct: 13 HTHGHHHDHHHENPSLKEGKTIEVISKILSKNDEEAKHNRAHFNEANTLCINLMSSPGSG 72
Query: 94 KTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIRE 153
KT L+ + K L+++ +A + D+ T D + GAL + + TG H
Sbjct: 73 KTTLLESTIKALKNELKIAVIEGDLETNNDALRVKNAGALAYQ----ITTGQSCHL---- 124
Query: 154 DISINLGPLEELSNLFKADLLLCESGGDNLAANFSRELADYI-IYIIDVSGGDKIPRKGG 212
D + L L+ + DLL E+ G NL S +L +++ + ++ ++ G P+K
Sbjct: 125 DAFMVHEALHHLA-IDDVDLLFIENVG-NLVCPASYDLGEHLNVVLLSITEGSDKPQKYP 182
Query: 213 PGITQADLL 221
+AD++
Sbjct: 183 VMFKKADIV 191
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.138 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 200 0.00087 111 3 11 22 0.37 33
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 597 (63 KB)
Total size of DFA: 159 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.53u 0.13s 17.66t Elapsed: 00:00:00
Total cpu time: 17.53u 0.13s 17.66t Elapsed: 00:00:00
Start: Mon May 20 23:47:46 2013 End: Mon May 20 23:47:46 2013