Query 027511
Match_columns 222
No_of_seqs 219 out of 2773
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 18:36:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027511.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027511hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oy2_A Glycosyltransferase B73 99.9 5.7E-27 1.9E-31 203.1 10.8 149 2-151 213-395 (413)
2 3qhp_A Type 1 capsular polysac 99.9 4.4E-26 1.5E-30 174.1 11.4 133 2-138 30-166 (166)
3 2x6q_A Trehalose-synthase TRET 99.9 2.6E-26 8.9E-31 199.3 11.4 146 2-147 260-415 (416)
4 3c48_A Predicted glycosyltrans 99.9 7.4E-26 2.5E-30 197.3 13.9 148 4-152 276-431 (438)
5 3okp_A GDP-mannose-dependent a 99.9 1.1E-25 3.8E-30 192.9 12.6 147 2-151 227-384 (394)
6 3fro_A GLGA glycogen synthase; 99.9 2.3E-25 8E-30 193.3 14.7 146 3-151 284-435 (439)
7 2jjm_A Glycosyl transferase, g 99.9 1.8E-25 6.2E-30 192.7 11.8 146 3-150 240-389 (394)
8 2iuy_A Avigt4, glycosyltransfe 99.9 4E-25 1.4E-29 187.1 13.1 139 4-150 188-339 (342)
9 2r60_A Glycosyl transferase, g 99.9 4.8E-25 1.6E-29 195.9 12.0 148 5-152 295-465 (499)
10 2gek_A Phosphatidylinositol ma 99.9 9.7E-25 3.3E-29 187.9 10.8 146 2-151 238-388 (406)
11 3s28_A Sucrose synthase 1; gly 99.9 1.8E-24 6.3E-29 202.1 12.4 145 2-146 601-769 (816)
12 3vue_A GBSS-I, granule-bound s 99.9 5E-24 1.7E-28 191.9 11.8 144 3-148 355-513 (536)
13 1rzu_A Glycogen synthase 1; gl 99.9 7.5E-24 2.6E-28 187.3 11.3 144 3-152 319-481 (485)
14 2qzs_A Glycogen synthase; glyc 99.9 9.1E-24 3.1E-28 186.8 11.3 143 3-151 320-481 (485)
15 2vsy_A XCC0866; transferase, g 99.9 1.9E-23 6.6E-28 188.2 12.6 140 2-150 404-563 (568)
16 2bfw_A GLGA glycogen synthase; 99.9 2.2E-23 7.4E-28 163.6 10.1 125 2-131 68-200 (200)
17 2f9f_A First mannosyl transfer 99.9 1E-22 3.4E-27 157.8 11.5 123 3-126 49-174 (177)
18 2iw1_A Lipopolysaccharide core 99.9 2.1E-23 7.3E-28 177.7 8.2 141 3-147 227-372 (374)
19 2x0d_A WSAF; GT4 family, trans 99.9 1.7E-23 5.8E-28 182.9 3.9 134 4-148 276-411 (413)
20 2hy7_A Glucuronosyltransferase 99.8 2.1E-21 7.1E-26 169.1 6.4 128 2-151 245-384 (406)
21 1uqt_A Alpha, alpha-trehalose- 99.8 1.3E-18 4.4E-23 154.7 15.8 140 4-146 290-454 (482)
22 2xci_A KDO-transferase, 3-deox 99.8 1.6E-18 5.6E-23 149.4 9.8 128 1-131 222-365 (374)
23 3nb0_A Glycogen [starch] synth 99.7 4.2E-18 1.4E-22 154.7 9.6 136 16-151 472-638 (725)
24 3beo_A UDP-N-acetylglucosamine 99.7 2.4E-18 8E-23 146.7 7.2 134 2-144 236-374 (375)
25 1f0k_A MURG, UDP-N-acetylgluco 99.7 4.5E-18 1.6E-22 144.5 7.9 133 4-148 212-359 (364)
26 1vgv_A UDP-N-acetylglucosamine 99.7 4.6E-19 1.6E-23 151.7 1.1 140 2-150 236-380 (384)
27 3t5t_A Putative glycosyltransf 99.7 4.2E-16 1.4E-20 138.2 13.9 141 4-147 314-474 (496)
28 1v4v_A UDP-N-acetylglucosamine 99.6 2.6E-15 9E-20 128.2 10.5 136 2-148 228-366 (376)
29 3rhz_A GTF3, nucleotide sugar 99.6 1E-15 3.4E-20 130.4 6.6 123 3-137 198-327 (339)
30 3ot5_A UDP-N-acetylglucosamine 99.3 9.7E-12 3.3E-16 108.0 10.9 136 2-148 255-393 (403)
31 3dzc_A UDP-N-acetylglucosamine 99.3 7.8E-12 2.7E-16 108.3 8.3 106 2-115 261-369 (396)
32 3otg_A CALG1; calicheamicin, T 99.2 7E-12 2.4E-16 108.0 6.2 111 28-145 290-409 (412)
33 3q3e_A HMW1C-like glycosyltran 99.2 3.8E-12 1.3E-16 115.0 3.2 143 2-148 468-625 (631)
34 2iyf_A OLED, oleandomycin glyc 99.2 1.3E-11 4.5E-16 107.2 6.5 131 3-146 261-401 (430)
35 4fzr_A SSFS6; structural genom 99.2 1.9E-11 6.6E-16 105.1 6.1 124 4-140 264-396 (398)
36 3tsa_A SPNG, NDP-rhamnosyltran 99.2 2.8E-11 9.5E-16 103.7 6.7 130 2-144 248-388 (391)
37 3oti_A CALG3; calicheamicin, T 99.0 6E-10 2.1E-14 95.8 6.7 127 4-143 263-396 (398)
38 3ia7_A CALG4; glycosysltransfe 99.0 9.1E-10 3.1E-14 94.2 6.9 111 28-145 279-399 (402)
39 2o6l_A UDP-glucuronosyltransfe 98.9 9.7E-10 3.3E-14 83.6 5.6 82 28-114 66-155 (170)
40 2p6p_A Glycosyl transferase; X 98.9 2.1E-09 7.1E-14 91.8 6.7 126 4-143 244-378 (384)
41 3rsc_A CALG2; TDP, enediyne, s 98.9 2.6E-09 8.8E-14 92.1 6.9 110 28-144 295-413 (415)
42 2yjn_A ERYCIII, glycosyltransf 98.9 3.2E-09 1.1E-13 92.7 7.0 128 4-144 299-435 (441)
43 3s2u_A UDP-N-acetylglucosamine 98.9 2.8E-08 9.7E-13 84.9 12.5 104 4-115 211-326 (365)
44 4hwg_A UDP-N-acetylglucosamine 98.8 1.4E-08 4.8E-13 87.6 10.4 103 4-115 237-344 (385)
45 2iya_A OLEI, oleandomycin glyc 98.7 5.8E-08 2E-12 84.0 8.6 109 28-143 303-420 (424)
46 4gyw_A UDP-N-acetylglucosamine 98.5 4.5E-07 1.5E-11 84.2 11.5 146 2-148 550-707 (723)
47 4amg_A Snogd; transferase, pol 98.3 7.3E-07 2.5E-11 76.1 5.2 107 28-141 286-397 (400)
48 1iir_A Glycosyltransferase GTF 98.2 8.4E-07 2.9E-11 76.6 3.8 110 29-149 284-401 (415)
49 1l5w_A Maltodextrin phosphoryl 98.1 1.8E-05 6.2E-10 73.2 10.1 145 3-148 564-732 (796)
50 2c4m_A Glycogen phosphorylase; 98.0 1E-05 3.4E-10 74.9 6.7 144 3-148 554-721 (796)
51 1rrv_A Glycosyltransferase GTF 97.9 3.6E-06 1.2E-10 72.6 2.5 79 28-114 284-370 (416)
52 2gj4_A Glycogen phosphorylase, 97.9 8.8E-06 3E-10 75.6 5.2 142 4-148 589-756 (824)
53 3h4t_A Glycosyltransferase GTF 97.9 1.1E-05 3.9E-10 69.4 4.8 110 28-149 266-383 (404)
54 3hbm_A UDP-sugar hydrolase; PS 97.0 0.0027 9.4E-08 52.1 8.2 63 8-80 188-251 (282)
55 2c1x_A UDP-glucose flavonoid 3 96.4 0.0095 3.2E-07 52.1 8.1 78 30-114 325-413 (456)
56 2pq6_A UDP-glucuronosyl/UDP-gl 96.2 0.013 4.5E-07 51.5 8.1 78 30-114 353-440 (482)
57 1psw_A ADP-heptose LPS heptosy 96.2 0.012 4.1E-07 49.0 7.3 72 4-80 213-287 (348)
58 3hbf_A Flavonoid 3-O-glucosylt 96.1 0.019 6.4E-07 50.3 8.4 79 30-113 327-414 (454)
59 3tov_A Glycosyl transferase fa 95.6 0.041 1.4E-06 46.2 8.2 77 4-86 217-293 (349)
60 2gt1_A Lipopolysaccharide hept 95.2 0.086 2.9E-06 43.4 8.6 102 4-113 210-322 (326)
61 1ygp_A Yeast glycogen phosphor 95.1 0.048 1.6E-06 50.9 7.3 102 3-104 647-767 (879)
62 2acv_A Triterpene UDP-glucosyl 94.6 0.12 4.2E-06 45.0 8.4 76 30-112 332-424 (463)
63 2jzc_A UDP-N-acetylglucosamine 93.7 0.024 8.2E-07 44.9 1.8 74 31-111 115-197 (224)
64 2vch_A Hydroquinone glucosyltr 93.6 0.26 8.9E-06 43.2 8.4 77 32-113 341-429 (480)
65 4fyk_A Deoxyribonucleoside 5'- 90.8 3.7 0.00013 30.1 10.8 106 5-113 3-142 (152)
66 4f3y_A DHPR, dihydrodipicolina 90.2 0.71 2.4E-05 37.4 6.7 78 4-84 7-108 (272)
67 3ijp_A DHPR, dihydrodipicolina 87.6 0.86 2.9E-05 37.3 5.5 77 4-83 21-122 (288)
68 3p2y_A Alanine dehydrogenase/p 87.0 5.9 0.0002 33.6 10.5 83 3-87 183-311 (381)
69 4dio_A NAD(P) transhydrogenase 82.8 4.6 0.00016 34.6 7.9 84 3-88 189-322 (405)
70 1rcu_A Conserved hypothetical 81.7 2.8 9.7E-05 32.1 5.7 70 41-110 110-192 (195)
71 1p9l_A Dihydrodipicolinate red 80.3 14 0.00049 29.1 9.6 75 5-82 1-78 (245)
72 3l7i_A Teichoic acid biosynthe 75.5 3.2 0.00011 38.1 5.1 67 40-112 606-682 (729)
73 3kb6_A D-lactate dehydrogenase 73.4 23 0.00078 29.2 9.4 81 4-86 141-236 (334)
74 2cok_A Poly [ADP-ribose] polym 73.2 4.6 0.00016 28.0 4.3 66 3-80 12-78 (113)
75 1e2b_A Enzyme IIB-cellobiose; 72.8 2.4 8.4E-05 29.0 2.7 51 7-60 7-61 (106)
76 3u80_A 3-dehydroquinate dehydr 70.3 17 0.00059 26.5 6.8 93 17-112 36-147 (151)
77 1vl6_A Malate oxidoreductase; 70.0 12 0.00041 31.8 6.9 74 2-77 190-290 (388)
78 3uuw_A Putative oxidoreductase 69.0 17 0.00057 29.2 7.5 39 41-79 58-96 (308)
79 3mz0_A Inositol 2-dehydrogenas 68.5 30 0.001 28.2 9.1 68 3-78 26-95 (344)
80 1ydw_A AX110P-like protein; st 65.8 41 0.0014 27.6 9.4 39 41-79 61-101 (362)
81 2k6g_A Replication factor C su 65.7 29 0.00099 23.7 8.4 62 3-78 34-97 (109)
82 3kip_A 3-dehydroquinase, type 65.6 15 0.0005 27.3 5.7 83 31-114 60-159 (167)
83 4had_A Probable oxidoreductase 65.2 24 0.00081 28.8 7.8 67 3-78 47-115 (350)
84 2uyg_A 3-dehydroquinate dehydr 63.2 37 0.0013 24.7 7.4 94 17-113 31-141 (149)
85 1j4a_A D-LDH, D-lactate dehydr 62.6 63 0.0021 26.5 9.9 80 4-85 146-240 (333)
86 3lwz_A 3-dehydroquinate dehydr 62.5 26 0.00088 25.6 6.4 93 17-112 39-147 (153)
87 3pp8_A Glyoxylate/hydroxypyruv 61.9 29 0.00098 28.4 7.6 81 4-86 139-235 (315)
88 1uqr_A 3-dehydroquinate dehydr 61.9 27 0.00091 25.6 6.4 93 17-112 33-141 (154)
89 2l2q_A PTS system, cellobiose- 61.6 34 0.0012 23.0 8.4 96 3-113 3-105 (109)
90 2yq5_A D-isomer specific 2-hyd 61.4 68 0.0023 26.5 10.4 81 4-86 148-242 (343)
91 3n8k_A 3-dehydroquinate dehydr 61.4 24 0.00082 26.2 6.2 94 17-113 60-169 (172)
92 3dfz_A SIRC, precorrin-2 dehyd 61.1 55 0.0019 25.3 11.3 86 4-91 31-133 (223)
93 1l7b_A DNA ligase; BRCT, autos 60.9 13 0.00044 24.6 4.3 62 3-79 9-71 (92)
94 3e9m_A Oxidoreductase, GFO/IDH 60.7 33 0.0011 27.9 7.8 40 41-80 57-98 (330)
95 1dih_A Dihydrodipicolinate red 59.8 6.5 0.00022 31.6 3.2 77 3-82 4-105 (273)
96 2a9f_A Putative malic enzyme ( 59.4 13 0.00043 31.8 5.0 75 2-78 186-286 (398)
97 2ixa_A Alpha-N-acetylgalactosa 58.7 59 0.002 27.6 9.4 39 41-79 81-121 (444)
98 1gqo_A Dehydroquinase; dehydra 58.6 30 0.001 24.9 6.2 93 17-112 32-140 (143)
99 2ebu_A Replication factor C su 58.5 41 0.0014 23.0 7.8 62 3-78 24-87 (112)
100 2yv1_A Succinyl-COA ligase [AD 58.3 22 0.00076 28.7 6.3 74 2-76 11-97 (294)
101 1xdw_A NAD+-dependent (R)-2-hy 57.7 62 0.0021 26.5 9.0 80 4-85 146-239 (331)
102 4hkt_A Inositol 2-dehydrogenas 57.6 32 0.0011 27.9 7.2 40 41-80 53-94 (331)
103 2khz_A C-MYC-responsive protei 57.6 50 0.0017 24.1 7.6 67 45-113 73-151 (165)
104 3db2_A Putative NADPH-dependen 57.5 44 0.0015 27.3 8.1 40 41-80 56-97 (354)
105 1h05_A 3-dehydroquinate dehydr 57.5 38 0.0013 24.5 6.6 93 17-112 34-142 (146)
106 3ju3_A Probable 2-oxoacid ferr 56.5 44 0.0015 22.9 6.8 98 3-112 12-117 (118)
107 3gvx_A Glycerate dehydrogenase 56.3 64 0.0022 26.0 8.7 80 4-85 122-214 (290)
108 3ezy_A Dehydrogenase; structur 55.2 43 0.0015 27.2 7.7 40 41-80 54-95 (344)
109 3qy9_A DHPR, dihydrodipicolina 54.1 7.2 0.00025 30.8 2.6 75 5-83 4-86 (243)
110 3cea_A MYO-inositol 2-dehydrog 54.0 50 0.0017 26.7 7.9 38 41-78 61-100 (346)
111 3d4o_A Dipicolinate synthase s 53.4 55 0.0019 26.0 7.9 76 3-80 154-244 (293)
112 4g2n_A D-isomer specific 2-hyd 53.3 75 0.0026 26.3 8.8 81 4-86 173-269 (345)
113 3moi_A Probable dehydrogenase; 52.6 71 0.0024 26.5 8.7 39 41-79 54-94 (387)
114 3ec7_A Putative dehydrogenase; 52.6 54 0.0018 26.9 7.9 39 41-79 77-117 (357)
115 2iz6_A Molybdenum cofactor car 51.8 16 0.00054 27.3 4.0 66 46-113 104-174 (176)
116 2vxb_A DNA repair protein RHP9 51.6 11 0.00038 29.6 3.3 77 2-81 3-98 (241)
117 2d8m_A DNA-repair protein XRCC 51.4 58 0.002 22.5 9.0 64 3-81 24-88 (129)
118 2yv2_A Succinyl-COA synthetase 51.2 45 0.0015 26.9 7.0 76 2-78 11-101 (297)
119 3v5n_A Oxidoreductase; structu 50.9 51 0.0017 27.8 7.6 39 41-79 95-140 (417)
120 4e4t_A Phosphoribosylaminoimid 50.8 77 0.0026 26.7 8.7 51 3-55 34-102 (419)
121 4ew6_A D-galactose-1-dehydroge 50.6 39 0.0013 27.5 6.6 75 3-80 24-112 (330)
122 3k5p_A D-3-phosphoglycerate de 50.5 96 0.0033 26.4 9.2 81 4-86 156-250 (416)
123 3dty_A Oxidoreductase, GFO/IDH 50.0 46 0.0016 27.8 7.2 38 41-78 70-114 (398)
124 4dgs_A Dehydrogenase; structur 49.8 73 0.0025 26.3 8.2 80 4-85 171-263 (340)
125 1dxy_A D-2-hydroxyisocaproate 49.7 76 0.0026 26.0 8.3 81 4-86 145-239 (333)
126 3jtm_A Formate dehydrogenase, 49.6 88 0.003 25.9 8.7 81 4-86 164-262 (351)
127 2nzw_A Alpha1,3-fucosyltransfe 49.4 24 0.00081 29.8 5.1 84 31-114 207-301 (371)
128 2cuk_A Glycerate dehydrogenase 49.2 67 0.0023 26.0 7.8 80 4-85 144-234 (311)
129 2nu8_A Succinyl-COA ligase [AD 49.0 50 0.0017 26.5 6.9 76 2-78 5-93 (288)
130 3ip3_A Oxidoreductase, putativ 48.9 49 0.0017 26.8 7.0 69 3-78 23-96 (337)
131 1f06_A MESO-diaminopimelate D- 48.5 23 0.0008 28.8 4.9 77 4-83 3-92 (320)
132 1mx3_A CTBP1, C-terminal bindi 48.5 1.1E+02 0.0039 25.1 9.3 80 4-85 168-264 (347)
133 1zh8_A Oxidoreductase; TM0312, 48.4 54 0.0018 26.7 7.2 39 41-79 72-112 (340)
134 2ozl_B PDHE1-B, pyruvate dehyd 48.3 39 0.0013 27.9 6.3 106 5-112 217-340 (341)
135 3l3e_A DNA topoisomerase 2-bin 48.1 57 0.002 21.6 7.6 66 3-80 17-83 (107)
136 3oet_A Erythronate-4-phosphate 47.9 73 0.0025 26.8 8.0 81 4-86 119-216 (381)
137 3euw_A MYO-inositol dehydrogen 47.5 70 0.0024 25.9 7.8 40 41-80 55-96 (344)
138 2glx_A 1,5-anhydro-D-fructose 47.2 75 0.0026 25.4 7.9 38 41-78 52-91 (332)
139 3ohs_X Trans-1,2-dihydrobenzen 46.3 66 0.0022 26.0 7.4 40 41-80 56-97 (334)
140 3evn_A Oxidoreductase, GFO/IDH 46.3 86 0.0029 25.2 8.1 77 3-80 4-98 (329)
141 1gtz_A 3-dehydroquinate dehydr 45.5 57 0.0019 23.8 6.0 93 17-112 38-147 (156)
142 4hy3_A Phosphoglycerate oxidor 44.8 1.1E+02 0.0037 25.5 8.5 80 4-85 176-271 (365)
143 2pi1_A D-lactate dehydrogenase 44.7 1.1E+02 0.0038 25.0 8.5 81 4-86 141-236 (334)
144 1ebf_A Homoserine dehydrogenas 44.5 67 0.0023 26.7 7.2 82 3-85 3-120 (358)
145 3nv9_A Malic enzyme; rossmann 44.5 53 0.0018 28.6 6.6 75 3-78 218-324 (487)
146 3m2t_A Probable dehydrogenase; 44.3 40 0.0014 27.7 5.8 40 40-79 57-98 (359)
147 3e82_A Putative oxidoreductase 44.3 75 0.0026 26.1 7.5 38 41-78 57-96 (364)
148 4fb5_A Probable oxidoreductase 44.2 48 0.0016 27.1 6.3 38 41-78 84-123 (393)
149 2ho3_A Oxidoreductase, GFO/IDH 44.0 66 0.0023 25.8 7.0 39 41-79 53-92 (325)
150 4gqa_A NAD binding oxidoreduct 43.9 77 0.0026 26.4 7.6 55 17-79 70-126 (412)
151 1j5p_A Aspartate dehydrogenase 43.8 15 0.0005 29.3 2.8 80 2-85 10-96 (253)
152 3c1a_A Putative oxidoreductase 43.5 40 0.0014 27.0 5.6 39 41-79 59-99 (315)
153 3u3x_A Oxidoreductase; structu 43.5 50 0.0017 27.2 6.3 39 41-79 78-118 (361)
154 1h6d_A Precursor form of gluco 43.2 38 0.0013 28.8 5.6 38 42-79 141-180 (433)
155 2ekl_A D-3-phosphoglycerate de 43.1 1.2E+02 0.0042 24.4 8.5 82 3-86 141-238 (313)
156 3e18_A Oxidoreductase; dehydro 43.1 79 0.0027 25.9 7.5 39 41-79 55-95 (359)
157 1s2d_A Purine trans deoxyribos 43.1 96 0.0033 22.7 7.9 36 45-80 77-116 (167)
158 1oi7_A Succinyl-COA synthetase 43.0 49 0.0017 26.5 6.0 72 2-75 5-90 (288)
159 2dc1_A L-aspartate dehydrogena 42.7 51 0.0017 25.2 5.9 76 6-83 2-84 (236)
160 3q2i_A Dehydrogenase; rossmann 42.7 1.1E+02 0.0036 24.9 8.1 39 41-79 65-105 (354)
161 1wwk_A Phosphoglycerate dehydr 42.6 1.3E+02 0.0045 24.2 9.1 80 4-85 142-237 (307)
162 3k5i_A Phosphoribosyl-aminoimi 42.4 1E+02 0.0034 25.8 8.1 69 3-75 23-110 (403)
163 4ina_A Saccharopine dehydrogen 42.1 1E+02 0.0036 25.8 8.2 71 6-78 29-105 (405)
164 4e5n_A Thermostable phosphite 42.0 82 0.0028 25.8 7.3 80 4-85 145-241 (330)
165 3sqd_A PAX-interacting protein 41.8 18 0.00062 27.9 3.1 63 4-81 16-79 (219)
166 3kux_A Putative oxidoreductase 41.5 93 0.0032 25.3 7.6 38 41-78 57-96 (352)
167 3kht_A Response regulator; PSI 40.7 81 0.0028 21.2 9.8 109 3-113 4-128 (144)
168 3i23_A Oxidoreductase, GFO/IDH 40.4 46 0.0016 27.2 5.5 37 42-78 56-94 (349)
169 3nbm_A PTS system, lactose-spe 40.3 67 0.0023 21.7 5.5 74 4-81 6-86 (108)
170 2rir_A Dipicolinate synthase, 40.1 73 0.0025 25.4 6.6 77 3-81 156-247 (300)
171 1tvm_A PTS system, galactitol- 39.6 24 0.00081 24.1 3.1 53 5-60 22-80 (113)
172 1t35_A Hypothetical protein YV 39.5 77 0.0026 23.7 6.2 68 40-109 88-178 (191)
173 1lc0_A Biliverdin reductase A; 39.5 31 0.0011 27.6 4.3 39 41-79 55-95 (294)
174 2czc_A Glyceraldehyde-3-phosph 39.4 47 0.0016 27.2 5.4 38 42-80 72-110 (334)
175 1r0k_A 1-deoxy-D-xylulose 5-ph 39.3 1.3E+02 0.0045 25.3 8.2 32 50-81 94-125 (388)
176 3ba1_A HPPR, hydroxyphenylpyru 39.0 1.5E+02 0.0053 24.1 8.5 80 4-85 164-256 (333)
177 1x13_A NAD(P) transhydrogenase 39.0 1.5E+02 0.0053 24.8 8.7 82 3-86 171-300 (401)
178 2pv7_A T-protein [includes: ch 38.9 1.2E+02 0.0042 24.0 7.8 51 6-58 23-74 (298)
179 3lzd_A DPH2; diphthamide biosy 38.9 15 0.00051 31.1 2.3 58 17-79 284-341 (378)
180 1qp8_A Formate dehydrogenase; 38.8 94 0.0032 25.0 7.1 81 4-86 124-216 (303)
181 1sc6_A PGDH, D-3-phosphoglycer 38.6 1.4E+02 0.0047 25.2 8.3 81 4-86 145-239 (404)
182 4h3v_A Oxidoreductase domain p 38.5 67 0.0023 26.2 6.3 56 16-79 48-105 (390)
183 3n58_A Adenosylhomocysteinase; 38.4 1E+02 0.0036 26.7 7.5 78 4-83 247-337 (464)
184 1k68_A Phytochrome response re 37.9 85 0.0029 20.6 11.1 108 4-113 2-131 (140)
185 1t15_A Breast cancer type 1 su 37.9 71 0.0024 23.7 6.0 67 3-81 3-73 (214)
186 1gq2_A Malic enzyme; oxidoredu 37.8 1.4E+02 0.0048 26.5 8.3 76 3-78 281-392 (555)
187 3grc_A Sensor protein, kinase; 37.6 89 0.003 20.8 11.6 107 4-114 6-128 (140)
188 3l4e_A Uncharacterized peptida 37.5 91 0.0031 23.6 6.5 63 17-82 47-122 (206)
189 3gvp_A Adenosylhomocysteinase 37.3 66 0.0023 27.7 6.1 79 3-83 219-310 (435)
190 1l0b_A BRCA1; TANDEM-BRCT, thr 37.3 80 0.0027 23.8 6.2 66 4-81 7-76 (229)
191 2qsj_A DNA-binding response re 36.9 98 0.0033 21.0 9.2 109 4-115 3-126 (154)
192 1tlt_A Putative oxidoreductase 36.7 1E+02 0.0034 24.6 7.0 33 47-79 63-95 (319)
193 2f62_A Nucleoside 2-deoxyribos 36.7 1.1E+02 0.0038 22.2 6.5 37 44-80 62-105 (161)
194 3q2o_A Phosphoribosylaminoimid 36.7 1.5E+02 0.0051 24.4 8.2 51 3-55 13-81 (389)
195 3oqb_A Oxidoreductase; structu 36.4 1.4E+02 0.0047 24.5 8.0 38 41-78 73-112 (383)
196 3evt_A Phosphoglycerate dehydr 36.2 90 0.0031 25.5 6.6 80 4-85 137-232 (324)
197 3h75_A Periplasmic sugar-bindi 36.1 1.5E+02 0.0053 23.5 8.1 64 17-82 24-95 (350)
198 3rc1_A Sugar 3-ketoreductase; 36.1 83 0.0028 25.7 6.5 39 41-79 79-119 (350)
199 2c4w_A 3-dehydroquinate dehydr 36.1 83 0.0028 23.4 5.6 92 17-111 41-151 (176)
200 4gmf_A Yersiniabactin biosynth 35.9 22 0.00074 29.9 2.8 14 66-79 87-100 (372)
201 1weh_A Conserved hypothetical 35.9 69 0.0023 23.5 5.3 65 41-109 89-170 (171)
202 2o4c_A Erythronate-4-phosphate 35.6 78 0.0027 26.6 6.2 81 4-86 116-213 (380)
203 2j6i_A Formate dehydrogenase; 35.2 1.9E+02 0.0065 23.9 8.6 81 4-85 164-262 (364)
204 1xea_A Oxidoreductase, GFO/IDH 35.0 1.5E+02 0.005 23.7 7.7 68 3-79 26-93 (323)
205 2nvw_A Galactose/lactose metab 34.9 1.5E+02 0.0052 25.4 8.2 39 41-79 98-144 (479)
206 1o0s_A NAD-ME, NAD-dependent m 34.9 1.4E+02 0.0049 26.7 7.9 76 3-78 319-430 (605)
207 3btv_A Galactose/lactose metab 34.2 1.4E+02 0.0049 25.2 7.8 39 41-79 79-125 (438)
208 2m1z_A LMO0427 protein; homolo 32.9 69 0.0024 21.7 4.5 80 17-112 23-104 (106)
209 1v8b_A Adenosylhomocysteinase; 31.7 1.1E+02 0.0037 26.7 6.6 80 3-84 256-348 (479)
210 3orq_A N5-carboxyaminoimidazol 31.5 2.1E+02 0.0073 23.4 9.2 51 3-55 11-79 (377)
211 2p2s_A Putative oxidoreductase 31.4 76 0.0026 25.6 5.4 39 41-79 56-96 (336)
212 2j48_A Two-component sensor ki 30.9 1E+02 0.0034 19.4 9.0 104 5-112 2-117 (119)
213 3gdo_A Uncharacterized oxidore 30.8 1.1E+02 0.0039 24.9 6.5 38 41-78 55-94 (358)
214 1umd_B E1-beta, 2-OXO acid deh 30.7 67 0.0023 26.1 5.0 106 5-112 203-323 (324)
215 1vm6_A DHPR, dihydrodipicolina 30.6 1.9E+02 0.0065 22.4 7.4 80 3-87 11-91 (228)
216 1w85_B Pyruvate dehydrogenase 30.1 75 0.0025 25.8 5.1 105 5-112 202-323 (324)
217 3h9u_A Adenosylhomocysteinase; 30.1 52 0.0018 28.3 4.3 78 3-82 210-300 (436)
218 3hg7_A D-isomer specific 2-hyd 29.9 88 0.003 25.6 5.5 81 4-86 140-236 (324)
219 3ic5_A Putative saccharopine d 29.7 1.1E+02 0.0039 19.6 8.5 24 4-27 5-28 (118)
220 3gg9_A D-3-phosphoglycerate de 29.4 1.5E+02 0.0051 24.5 6.9 80 4-85 160-256 (352)
221 3d64_A Adenosylhomocysteinase; 29.2 1.6E+02 0.0055 25.7 7.3 79 4-84 277-368 (494)
222 3ce6_A Adenosylhomocysteinase; 28.8 2E+02 0.0069 25.0 7.9 79 3-83 273-364 (494)
223 2g76_A 3-PGDH, D-3-phosphoglyc 28.4 1.8E+02 0.0063 23.7 7.3 81 4-86 165-261 (335)
224 2qip_A Protein of unknown func 28.2 83 0.0028 22.7 4.7 51 3-56 109-159 (165)
225 2d0i_A Dehydrogenase; structur 28.0 2.4E+02 0.0083 22.8 8.6 79 4-85 146-240 (333)
226 3heb_A Response regulator rece 28.0 1.4E+02 0.0048 20.1 11.7 108 4-113 4-135 (152)
227 1gpj_A Glutamyl-tRNA reductase 27.9 2.6E+02 0.009 23.2 8.5 83 3-86 166-270 (404)
228 1zym_A Enzyme I; phosphotransf 27.8 2E+02 0.0069 22.6 7.2 75 30-105 155-238 (258)
229 3sho_A Transcriptional regulat 27.8 1E+02 0.0035 22.2 5.2 70 6-78 41-119 (187)
230 1l7d_A Nicotinamide nucleotide 27.7 2.3E+02 0.008 23.3 8.0 82 3-86 171-302 (384)
231 2ki0_A DS119; beta-alpha-beta, 27.7 11 0.00036 19.6 -0.3 30 5-36 5-35 (36)
232 2h1q_A Hypothetical protein; Z 27.4 40 0.0014 27.0 2.9 99 3-108 140-252 (270)
233 3czc_A RMPB; alpha/beta sandwi 26.6 1E+02 0.0035 20.6 4.6 50 7-59 22-77 (110)
234 1eiw_A Hypothetical protein MT 26.5 58 0.002 22.2 3.3 68 45-112 34-109 (111)
235 2zay_A Response regulator rece 26.5 1.5E+02 0.005 19.8 10.6 109 3-115 7-130 (147)
236 1jw9_B Molybdopterin biosynthe 26.3 2.2E+02 0.0076 21.9 7.9 66 18-83 89-156 (249)
237 3l5o_A Uncharacterized protein 25.9 39 0.0013 27.1 2.6 101 4-108 141-252 (270)
238 2vhw_A Alanine dehydrogenase; 25.6 2.2E+02 0.0075 23.5 7.4 74 3-78 167-266 (377)
239 3oa2_A WBPB; oxidoreductase, s 25.6 2.6E+02 0.0088 22.3 8.5 31 49-79 73-103 (318)
240 1gdh_A D-glycerate dehydrogena 25.6 2.2E+02 0.0076 22.9 7.3 79 4-84 146-242 (320)
241 2dbq_A Glyoxylate reductase; D 25.6 2.7E+02 0.0091 22.5 9.1 81 4-86 150-246 (334)
242 2nte_A BARD-1, BRCA1-associate 25.5 1.5E+02 0.0052 22.0 5.9 65 5-81 3-68 (210)
243 1pjc_A Protein (L-alanine dehy 25.4 2.7E+02 0.0091 22.7 7.8 71 5-77 168-264 (361)
244 1zud_1 Adenylyltransferase THI 24.7 2.4E+02 0.0083 21.7 7.4 67 17-83 85-153 (251)
245 2qvg_A Two component response 24.2 1.6E+02 0.0054 19.4 9.7 108 4-113 7-135 (143)
246 1ydh_A AT5G11950; structural g 24.1 2.1E+02 0.0072 21.8 6.5 68 40-109 96-186 (216)
247 2a33_A Hypothetical protein; s 24.0 1.2E+02 0.004 23.2 5.0 68 41-110 101-191 (215)
248 1q1v_A DEK protein; winged-hel 24.0 1.3E+02 0.0044 18.6 4.3 34 97-130 11-46 (70)
249 2axq_A Saccharopine dehydrogen 23.8 3.4E+02 0.012 23.2 9.7 42 39-80 78-119 (467)
250 2i9n_A MHB4A peptide; beta-hai 23.6 22 0.00076 18.0 0.4 16 58-73 18-33 (33)
251 2w2k_A D-mandelate dehydrogena 23.5 3E+02 0.01 22.4 8.1 79 4-84 163-260 (348)
252 1ik6_A Pyruvate dehydrogenase; 23.3 2.2E+02 0.0074 23.6 6.9 105 5-112 250-368 (369)
253 3o9z_A Lipopolysaccaride biosy 23.2 2.8E+02 0.0097 22.0 8.2 30 49-78 72-101 (312)
254 3al2_A DNA topoisomerase 2-bin 22.8 1.6E+02 0.0055 22.6 5.6 66 4-81 9-75 (235)
255 2ejw_A HDH, homoserine dehydro 22.8 56 0.0019 26.9 3.0 34 49-82 66-100 (332)
256 4id3_A DNA repair protein REV1 22.7 82 0.0028 19.8 3.4 25 3-27 9-34 (92)
257 2z2v_A Hypothetical protein PH 22.7 1.9E+02 0.0064 23.9 6.4 42 39-80 67-108 (365)
258 2yva_A DNAA initiator-associat 22.6 2.2E+02 0.0075 20.5 6.7 73 6-78 43-141 (196)
259 2etx_A Mediator of DNA damage 22.6 1.1E+02 0.0036 23.0 4.5 61 4-81 12-72 (209)
260 1xvl_A Mn transporter, MNTC pr 22.4 3.1E+02 0.011 22.1 7.6 70 41-113 86-166 (321)
261 4e7p_A Response regulator; DNA 22.3 1.8E+02 0.0063 19.5 10.7 110 4-115 20-142 (150)
262 3ehd_A Uncharacterized conserv 22.2 94 0.0032 22.7 3.9 35 45-79 65-103 (162)
263 2dvm_A Malic enzyme, 439AA lon 21.9 1.3E+02 0.0046 25.7 5.3 69 3-71 185-287 (439)
264 3bq9_A Predicted rossmann fold 21.6 1.1E+02 0.0037 26.6 4.6 145 40-188 236-433 (460)
265 2pln_A HP1043, response regula 21.4 1.8E+02 0.0062 19.0 10.0 104 3-113 17-133 (137)
266 1wek_A Hypothetical protein TT 21.3 58 0.002 25.1 2.7 68 41-110 123-213 (217)
267 2ioj_A Hypothetical protein AF 21.3 1.5E+02 0.0052 20.5 4.8 32 50-81 75-106 (139)
268 3h5i_A Response regulator/sens 21.0 1.9E+02 0.0065 19.1 13.1 106 4-113 5-124 (140)
269 3do5_A HOM, homoserine dehydro 20.8 3.4E+02 0.012 22.0 7.7 44 42-85 71-120 (327)
270 1nvm_B Acetaldehyde dehydrogen 20.8 1.8E+02 0.0063 23.4 5.8 40 41-80 58-104 (312)
271 1q6z_A BFD, BFDC, benzoylforma 20.7 1.2E+02 0.0043 26.2 5.1 48 7-55 204-272 (528)
272 1pj3_A NAD-dependent malic enz 20.3 4.6E+02 0.016 23.3 8.5 38 41-78 355-397 (564)
273 2nac_A NAD-dependent formate d 20.3 2.2E+02 0.0075 23.9 6.3 81 4-86 191-289 (393)
274 3fwz_A Inner membrane protein 20.2 2.1E+02 0.0073 19.4 7.2 23 6-28 9-31 (140)
275 1kzy_C Tumor suppressor P53-bi 20.1 2.7E+02 0.0092 21.6 6.5 20 62-81 98-117 (259)
No 1
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.94 E-value=5.7e-27 Score=203.12 Aligned_cols=149 Identities=15% Similarity=0.136 Sum_probs=134.4
Q ss_pred CCceEEEEEcCCccH------HHHHHHHHHcCCCCc-------EEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHH
Q 027511 2 RVKVRFIVGGDGPKR------VRLEEMREKHSLQDR-------VEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILE 68 (222)
Q Consensus 2 ~p~~~lvi~G~g~~~------~~l~~~~~~~~l~~~-------V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilE 68 (222)
+|+++|+|+|+|+.. +.++++++++++.++ |.+.|+++++++..+|++||++|+||..|+||++++|
T Consensus 213 ~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lE 292 (413)
T 3oy2_A 213 YPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAE 292 (413)
T ss_dssp CTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHH
T ss_pred CCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHH
Confidence 589999999999865 899999999999987 8888999999999999999999999999999999999
Q ss_pred HHHhCCcEEEeCCCCccccccCCce-------------------EEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHH
Q 027511 69 AASCGLLTVSTRVGGVPEVLPDDMV-------------------VLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMK 127 (222)
Q Consensus 69 Ama~G~PvVa~~~gg~~e~i~~~~~-------------------g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~ 127 (222)
||+||+|||+++.||.+|++.++.+ .+...|+++++++| +++++++ ..++.++++.+.
T Consensus 293 Ama~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~ 371 (413)
T 3oy2_A 293 GAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVK 371 (413)
T ss_dssp HHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998765 34445999999999 9999876 677888999998
Q ss_pred hcCCHHHHHHHHHHHHHHHhcCCC
Q 027511 128 KLYNWHDVAKRTEIVYDRALECPN 151 (222)
Q Consensus 128 ~~fs~~~~~~~~~~~~~~~~~~~~ 151 (222)
+.|+|+.+++++.++|+++++++.
T Consensus 372 ~~fs~~~~~~~~~~~~~~~~~~~~ 395 (413)
T 3oy2_A 372 TKPTWDDISSDIIDFFNSLLRVES 395 (413)
T ss_dssp TSCCHHHHHHHHHHHHHHHTC---
T ss_pred HhCCHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999987654
No 2
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.93 E-value=4.4e-26 Score=174.15 Aligned_cols=133 Identities=15% Similarity=0.260 Sum_probs=115.9
Q ss_pred CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCC-cEEE-e
Q 027511 2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGL-LTVS-T 79 (222)
Q Consensus 2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~-PvVa-~ 79 (222)
.|+++|+|+|+|+..+.++++++++++ +|.| |+++++++..+|+.||++|+||..|+||++++|||+||+ |||+ +
T Consensus 30 ~~~~~l~i~G~g~~~~~~~~~~~~~~~--~v~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~ 106 (166)
T 3qhp_A 30 KQDIVLLLKGKGPDEKKIKLLAQKLGV--KAEF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANS 106 (166)
T ss_dssp GGGEEEEEECCSTTHHHHHHHHHHHTC--EEEC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECC
T ss_pred CCCeEEEEEeCCccHHHHHHHHHHcCC--eEEE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeC
Confidence 479999999999999999999999987 7999 999999999999999999999999999999999999998 9999 5
Q ss_pred CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHH
Q 027511 80 RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKR 138 (222)
Q Consensus 80 ~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~ 138 (222)
+.|+..+++.++.+.+...|+++++++|.+++++++ ..++.++++.+ ++|+|+.++++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 107 PLSATRQFALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp TTCGGGGGCSSGGGEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHHC-------
T ss_pred CCCchhhhccCCceEEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence 689999999998887777799999999999999876 56777788777 78999998764
No 3
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.93 E-value=2.6e-26 Score=199.29 Aligned_cols=146 Identities=17% Similarity=0.148 Sum_probs=132.7
Q ss_pred CCceEEEEEcCCcc-----HHHHHHHHHHcCCCCcEEEeCCCC---hhHHHHHHHhccEEEEcCCCccccHHHHHHHHhC
Q 027511 2 RVKVRFIVGGDGPK-----RVRLEEMREKHSLQDRVEMLGAVP---HAQVRSVLISGHIFLNSSLTEAFCIAILEAASCG 73 (222)
Q Consensus 2 ~p~~~lvi~G~g~~-----~~~l~~~~~~~~l~~~V~~~g~v~---~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G 73 (222)
+|+++|+|+|+|+. .+.++++++++++.++|.|+|+++ ++++..+|+.||++|+||..|+||++++|||+||
T Consensus 260 ~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G 339 (416)
T 2x6q_A 260 IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKG 339 (416)
T ss_dssp CTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTT
T ss_pred CCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcC
Confidence 58999999999975 567888999999999999999654 7899999999999999999999999999999999
Q ss_pred CcEEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q 027511 74 LLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRAL 147 (222)
Q Consensus 74 ~PvVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~ 147 (222)
+|||+++.||.+|++.++.+|+..+|+++++++|.+++++++ ..++.++++.+.+.|+|+.+++++.++|++++
T Consensus 340 ~PvI~~~~~g~~e~i~~~~~g~l~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 340 KPVIGRAVGGIKFQIVDGETGFLVRDANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp CCEEEESCHHHHHHCCBTTTEEEESSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred CCEEEccCCCChhheecCCCeEEECCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 999999999999999998888776799999999999999876 56788889999899999999999999998754
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.93 E-value=7.4e-26 Score=197.32 Aligned_cols=148 Identities=20% Similarity=0.330 Sum_probs=132.9
Q ss_pred ceEEEEEcC----CccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 4 KVRFIVGGD----GPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 4 ~~~lvi~G~----g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
+++|+|+|+ |+..+.++++++++++.++|.|+|+++++++..+|+.||++|+||..|+||++++|||+||+|||++
T Consensus 276 ~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~ 355 (438)
T 3c48_A 276 NLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAA 355 (438)
T ss_dssp SEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEE
T ss_pred ceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEec
Confidence 899999998 8888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCc
Q 027511 80 RVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPNQ 152 (222)
Q Consensus 80 ~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~~ 152 (222)
+.||..|++.++.+|+..+ |+++++++|.+++++++ ..++.++++.+.+ |+|+.+++++.++|+++++.++.
T Consensus 356 ~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 356 RVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp SCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhccc
Confidence 9999999999987665433 89999999999999876 5677888888888 99999999999999999886543
No 5
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.93 E-value=1.1e-25 Score=192.92 Aligned_cols=147 Identities=18% Similarity=0.287 Sum_probs=133.3
Q ss_pred CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCC-------ccccHHHHHHHHhCC
Q 027511 2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT-------EAFCIAILEAASCGL 74 (222)
Q Consensus 2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~-------E~~g~~ilEAma~G~ 74 (222)
+|+++|+|+|+|+..+.+++++ .++.++|.|+|+++++++..+|+.||++|+||.. |+||++++|||+||+
T Consensus 227 ~~~~~l~i~G~g~~~~~l~~~~--~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~ 304 (394)
T 3okp_A 227 RPDAQLLIVGSGRYESTLRRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV 304 (394)
T ss_dssp STTCEEEEECCCTTHHHHHHHT--GGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC
T ss_pred CCCeEEEEEcCchHHHHHHHHH--hcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC
Confidence 5899999999999999999988 5667899999999999999999999999999999 999999999999999
Q ss_pred cEEEeCCCCccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC
Q 027511 75 LTVSTRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECP 150 (222)
Q Consensus 75 PvVa~~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 150 (222)
|||+++.|+..|++.++ +|+..+ |+++++++|.+++++++ ..++.++++.+.++|+|+.+++++.++|+++....
T Consensus 305 PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~ 383 (394)
T 3okp_A 305 PVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKL 383 (394)
T ss_dssp CEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC--
T ss_pred CEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCc
Confidence 99999999999999998 665554 99999999999999876 66788889999999999999999999999887644
Q ss_pred C
Q 027511 151 N 151 (222)
Q Consensus 151 ~ 151 (222)
.
T Consensus 384 ~ 384 (394)
T 3okp_A 384 A 384 (394)
T ss_dssp -
T ss_pred c
Confidence 3
No 6
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.93 E-value=2.3e-25 Score=193.25 Aligned_cols=146 Identities=23% Similarity=0.379 Sum_probs=131.7
Q ss_pred CceEEEEEcCCccH--HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 3 VKVRFIVGGDGPKR--VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 3 p~~~lvi~G~g~~~--~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
|+++|+|+|+|+.. +.+++++++++ +++.|.|+++++++..+|++||++|+||..|+||++++|||+||+|||+++
T Consensus 284 ~~~~l~i~G~g~~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~ 361 (439)
T 3fro_A 284 QEMRFIIIGKGDPELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASA 361 (439)
T ss_dssp GGEEEEEECCCCHHHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEES
T ss_pred CCeEEEEEcCCChhHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcC
Confidence 89999999999987 89999999988 778899999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCceEEeCC-CHHHHHHHHHHHHh-cCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCC
Q 027511 81 VGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAIS-LLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPN 151 (222)
Q Consensus 81 ~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~-~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 151 (222)
.||..|++.++.+.+..+ |+++++++|.++++ +++ ..++.++++.+ +.|+|+.+++++.++|++++++..
T Consensus 362 ~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~ 435 (439)
T 3fro_A 362 VGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRAF 435 (439)
T ss_dssp STHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCBC
T ss_pred CCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhhh
Confidence 999999998774444444 99999999999999 666 56778888888 669999999999999999887543
No 7
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.92 E-value=1.8e-25 Score=192.66 Aligned_cols=146 Identities=23% Similarity=0.372 Sum_probs=132.4
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG 82 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g 82 (222)
++++|+|+|+|+..++++++++++++.++|.|+|+ .+++..+|++||++|+||..|+||++++|||+||+|||+++.|
T Consensus 240 ~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~ 317 (394)
T 2jjm_A 240 VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVG 317 (394)
T ss_dssp SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCT
T ss_pred CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCc--hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCC
Confidence 46899999999999999999999999999999996 5889999999999999999999999999999999999999999
Q ss_pred CccccccCCceEEeCC--CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC
Q 027511 83 GVPEVLPDDMVVLAEP--DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECP 150 (222)
Q Consensus 83 g~~e~i~~~~~g~~~~--~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 150 (222)
|..|++.++.+|+..+ |+++++++|.+++++++ ..++.++++.+.+.|+|+.+++++.++|+++++..
T Consensus 318 ~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 318 GIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp TSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred ChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 9999999887665444 99999999999999876 56788888898899999999999999999988653
No 8
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.92 E-value=4e-25 Score=187.09 Aligned_cols=139 Identities=22% Similarity=0.279 Sum_probs=129.0
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC----------CccccHHHHHHHHhC
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL----------TEAFCIAILEAASCG 73 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~----------~E~~g~~ilEAma~G 73 (222)
+++|+|+|+|+..+++++++++++ ++|.|+|+++++++..+|++||++|+||. .|+||++++|||+||
T Consensus 188 ~~~l~i~G~g~~~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G 265 (342)
T 2iuy_A 188 GRRLVLAGPAWEPEYFDEITRRYG--STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSG 265 (342)
T ss_dssp TCCEEEESCCCCHHHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTT
T ss_pred CcEEEEEeCcccHHHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcC
Confidence 578999999999999999999887 78999999999999999999999999999 899999999999999
Q ss_pred CcEEEeCCCCccccccC--CceEEeCC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC
Q 027511 74 LLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECP 150 (222)
Q Consensus 74 ~PvVa~~~gg~~e~i~~--~~~g~~~~-~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 150 (222)
+|||+++.||..|++.+ +.+|+..+ |+++++++|.++++ +.++++.+.+.|+|+.+++++.++|+++++.+
T Consensus 266 ~PvI~s~~~~~~e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 266 TPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDEARRTLAGLPA------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp CCEEECCTTTHHHHGGGGEEECCSSSCCCHHHHHHHHHTSCC------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEcCCCChHHHhcccCCCceEEcCCCHHHHHHHHHHHHH------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999 77776655 99999999998876 78888889899999999999999999998753
No 9
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.92 E-value=4.8e-25 Score=195.94 Aligned_cols=148 Identities=20% Similarity=0.287 Sum_probs=132.3
Q ss_pred eEEEEEcC--Cc------c-------HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----cEEEEcCCCccccHH
Q 027511 5 VRFIVGGD--GP------K-------RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----HIFLNSSLTEAFCIA 65 (222)
Q Consensus 5 ~~lvi~G~--g~------~-------~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----dv~v~~s~~E~~g~~ 65 (222)
++++|+|+ |+ . .++++++++++++.++|.|+|+++++++..+|+.| |++|+||..|+||++
T Consensus 295 ~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~ 374 (499)
T 2r60_A 295 NLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLA 374 (499)
T ss_dssp EEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSH
T ss_pred eEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcH
Confidence 58999998 44 1 78899999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHhCCcEEEeCCCCccccccCCceEEe-C-CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHH
Q 027511 66 ILEAASCGLLTVSTRVGGVPEVLPDDMVVLA-E-PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEI 141 (222)
Q Consensus 66 ilEAma~G~PvVa~~~gg~~e~i~~~~~g~~-~-~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~ 141 (222)
++|||+||+|||+++.||.+|++.++.+|+. . .|+++++++|.+++++++ ..++.++++.+.+.|+|+.+++++.+
T Consensus 375 ~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~ 454 (499)
T 2r60_A 375 PVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLE 454 (499)
T ss_dssp HHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999999999999866543 3 399999999999999876 56788889999999999999999999
Q ss_pred HHHHHhcCCCc
Q 027511 142 VYDRALECPNQ 152 (222)
Q Consensus 142 ~~~~~~~~~~~ 152 (222)
+|++++.....
T Consensus 455 ~y~~~~~~~~~ 465 (499)
T 2r60_A 455 VIQEIADRKDE 465 (499)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHhhhhh
Confidence 99999876543
No 10
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.91 E-value=9.7e-25 Score=187.93 Aligned_cols=146 Identities=22% Similarity=0.269 Sum_probs=132.4
Q ss_pred CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCcEEEeC
Q 027511 2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~PvVa~~ 80 (222)
+|+++|+|+|+|+. +.++++++++ .++|.|+|+++++++..+|++||++|+||. .|+||++++|||+||+|||+++
T Consensus 238 ~~~~~l~i~G~~~~-~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~ 314 (406)
T 2gek_A 238 FPDVEILIVGRGDE-DELREQAGDL--AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASD 314 (406)
T ss_dssp STTCEEEEESCSCH-HHHHHHTGGG--GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECC
T ss_pred CCCeEEEEEcCCcH-HHHHHHHHhc--cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEec
Confidence 58999999999988 8888888876 678999999999999999999999999996 9999999999999999999999
Q ss_pred CCCccccccCCceEEeC--CCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCC
Q 027511 81 VGGVPEVLPDDMVVLAE--PDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECPN 151 (222)
Q Consensus 81 ~gg~~e~i~~~~~g~~~--~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 151 (222)
.||..|++.++.+|+.. .|+++++++|.+++++++ ..++.++++.+. .|+|+.+++++.++|+++++...
T Consensus 315 ~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 315 LDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp CHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHHHHHHHHHHCCTTC
T ss_pred CCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhhcc
Confidence 99999999988776554 489999999999999876 566778888887 89999999999999999987644
No 11
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.91 E-value=1.8e-24 Score=202.09 Aligned_cols=145 Identities=17% Similarity=0.275 Sum_probs=129.7
Q ss_pred CCceEEEEEcCCc-----------cHHHHHHHHHHcCCCCcEEEeCCCC----hhHHHHHHH-hccEEEEcCCCccccHH
Q 027511 2 RVKVRFIVGGDGP-----------KRVRLEEMREKHSLQDRVEMLGAVP----HAQVRSVLI-SGHIFLNSSLTEAFCIA 65 (222)
Q Consensus 2 ~p~~~lvi~G~g~-----------~~~~l~~~~~~~~l~~~V~~~g~v~----~~~~~~ll~-~adv~v~~s~~E~~g~~ 65 (222)
+|+++|+|+|+|+ ..+.++++++++++.++|.|+|+++ .+++..+|. ++|++|+||..|+||++
T Consensus 601 ~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~Egfglv 680 (816)
T 3s28_A 601 RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLT 680 (816)
T ss_dssp HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHH
T ss_pred CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHH
Confidence 3679999999998 6688999999999999999999554 588999998 57999999999999999
Q ss_pred HHHHHHhCCcEEEeCCCCccccccCCceEEe-CC-CHHHHHHHHHHHH----hcCC--CCCHHHHHHHHHhcCCHHHHHH
Q 027511 66 ILEAASCGLLTVSTRVGGVPEVLPDDMVVLA-EP-DPGDMVLAIRKAI----SLLP--KIDPQVMHERMKKLYNWHDVAK 137 (222)
Q Consensus 66 ilEAma~G~PvVa~~~gg~~e~i~~~~~g~~-~~-~~~~la~~i~~ll----~~~~--~~~~~~~~~~~~~~fs~~~~~~ 137 (222)
++||||||+|||+|+.||+.|++.++.+|+. .+ |+++++++|.+++ .++. ..++.++++.+.+.|||+.+++
T Consensus 681 llEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~ 760 (816)
T 3s28_A 681 VVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQ 760 (816)
T ss_dssp HHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999999999877654 33 8999999998777 6766 6788999999999999999999
Q ss_pred HHHHHHHHH
Q 027511 138 RTEIVYDRA 146 (222)
Q Consensus 138 ~~~~~~~~~ 146 (222)
++.++|+..
T Consensus 761 ~ll~lY~~~ 769 (816)
T 3s28_A 761 RLLTLTGVY 769 (816)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999865
No 12
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.90 E-value=5e-24 Score=191.93 Aligned_cols=144 Identities=18% Similarity=0.254 Sum_probs=118.9
Q ss_pred CceEEEEEcCCccHH--HHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 3 VKVRFIVGGDGPKRV--RLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 3 p~~~lvi~G~g~~~~--~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
++.+|+|+|.|+... .++..... +.++|.+.+..+.+++..+|+.||+||+||.+|+||++++|||+||+|||+++
T Consensus 355 ~~~~l~l~G~G~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~ 432 (536)
T 3vue_A 355 EDVQIVLLGTGKKKFEKLLKSMEEK--YPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACAS 432 (536)
T ss_dssp SSCEEEEECCBCHHHHHHHHHHHHH--STTTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECS
T ss_pred hCCeEEEEeccCchHHHHHHHHHhh--cCCceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcC
Confidence 467889999886553 34444444 45789999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCceEEe-----------CC-CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q 027511 81 VGGVPEVLPDDMVVLA-----------EP-DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDRAL 147 (222)
Q Consensus 81 ~gg~~e~i~~~~~g~~-----------~~-~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~ 147 (222)
+||++|++.++.+|+. ++ |+++++++|.++++... ....+..++.+++.|||++++++|+++|+++.
T Consensus 433 ~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 433 TGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp CTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTC
T ss_pred CCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 9999999999988862 22 68999999999998544 22233344556678999999999999999874
Q ss_pred c
Q 027511 148 E 148 (222)
Q Consensus 148 ~ 148 (222)
.
T Consensus 513 ~ 513 (536)
T 3vue_A 513 V 513 (536)
T ss_dssp C
T ss_pred h
Confidence 3
No 13
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.90 E-value=7.5e-24 Score=187.35 Aligned_cols=144 Identities=19% Similarity=0.226 Sum_probs=120.2
Q ss_pred CceEEEEEcCCc--cHHHHHHHHHHcCCCCcEE-EeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 3 VKVRFIVGGDGP--KRVRLEEMREKHSLQDRVE-MLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 3 p~~~lvi~G~g~--~~~~l~~~~~~~~l~~~V~-~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
++++|+|+|+|+ ..+.+++++++++ ++|. |.|+ +.+++..+|++||++|+||..|+||++++|||+||+|||++
T Consensus 319 ~~~~l~ivG~g~~~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s 395 (485)
T 1rzu_A 319 LGGRLVVLGAGDVALEGALLAAASRHH--GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVA 395 (485)
T ss_dssp TTCEEEEEECBCHHHHHHHHHHHHHTT--TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEE
T ss_pred cCceEEEEeCCchHHHHHHHHHHHhCC--CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEe
Confidence 478999999996 4688899998875 6787 7888 78888999999999999999999999999999999999999
Q ss_pred CCCCccccccCC---------ceEEe-CC-CHHHHHHHHHHHH---hcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511 80 RVGGVPEVLPDD---------MVVLA-EP-DPGDMVLAIRKAI---SLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVY 143 (222)
Q Consensus 80 ~~gg~~e~i~~~---------~~g~~-~~-~~~~la~~i~~ll---~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 143 (222)
+.||++|++.++ .+|+. .+ |+++++++|.+++ ++++ ..++.+++ ++.|||+.+++++.++|
T Consensus 396 ~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~---~~~fs~~~~~~~~~~~y 472 (485)
T 1rzu_A 396 RTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALY 472 (485)
T ss_dssp SSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH---TCCCBHHHHHHHHHHHH
T ss_pred CCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHH---HHhCChHHHHHHHHHHH
Confidence 999999999987 66644 33 9999999999999 4544 33344443 37899999999999999
Q ss_pred HHHhcCCCc
Q 027511 144 DRALECPNQ 152 (222)
Q Consensus 144 ~~~~~~~~~ 152 (222)
+++++.++.
T Consensus 473 ~~~~~~~~~ 481 (485)
T 1rzu_A 473 SQLISKGHH 481 (485)
T ss_dssp HHHTC----
T ss_pred HHhhCCCCC
Confidence 999876554
No 14
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.90 E-value=9.1e-24 Score=186.78 Aligned_cols=143 Identities=17% Similarity=0.187 Sum_probs=119.4
Q ss_pred CceEEEEEcCCc--cHHHHHHHHHHcCCCCcEE-EeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 3 VKVRFIVGGDGP--KRVRLEEMREKHSLQDRVE-MLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 3 p~~~lvi~G~g~--~~~~l~~~~~~~~l~~~V~-~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
++++|+|+|+|+ ..+.+++++++++ ++|. |.|. +.+++..+|++||++|+||..|+||++++|||+||+|||++
T Consensus 320 ~~~~l~ivG~g~~~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s 396 (485)
T 2qzs_A 320 QGGQLALLGAGDPVLQEGFLAAAAEYP--GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVR 396 (485)
T ss_dssp TTCEEEEEEEECHHHHHHHHHHHHHST--TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEE
T ss_pred CCcEEEEEeCCchHHHHHHHHHHHhCC--CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEEC
Confidence 478999999986 4688889998875 6786 7888 78888999999999999999999999999999999999999
Q ss_pred CCCCccccccCC---------ceEEeCC--CHHHHHHHHHHHH---hcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511 80 RVGGVPEVLPDD---------MVVLAEP--DPGDMVLAIRKAI---SLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVY 143 (222)
Q Consensus 80 ~~gg~~e~i~~~---------~~g~~~~--~~~~la~~i~~ll---~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 143 (222)
+.||++|++.++ .+|+..+ |+++++++|.+++ ++++ ..++.+++ ++.|||+.+++++.++|
T Consensus 397 ~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~---~~~fs~~~~~~~~~~ly 473 (485)
T 2qzs_A 397 RTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAM---AMDFSWQVAAKSYRELY 473 (485)
T ss_dssp SSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHH---HCCCCHHHHHHHHHHHH
T ss_pred CCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH---hhcCCHHHHHHHHHHHH
Confidence 999999999987 6665433 9999999999999 4544 33344443 37899999999999999
Q ss_pred HHHhcCCC
Q 027511 144 DRALECPN 151 (222)
Q Consensus 144 ~~~~~~~~ 151 (222)
+++..+..
T Consensus 474 ~~~~~~~~ 481 (485)
T 2qzs_A 474 YRLKLEHH 481 (485)
T ss_dssp HHHC----
T ss_pred HHhhhhhc
Confidence 99876544
No 15
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.90 E-value=1.9e-23 Score=188.22 Aligned_cols=140 Identities=14% Similarity=0.121 Sum_probs=130.1
Q ss_pred CCceEEEEEc-CCccHHHHHHHHHHcCCC-CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEE-
Q 027511 2 RVKVRFIVGG-DGPKRVRLEEMREKHSLQ-DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVS- 78 (222)
Q Consensus 2 ~p~~~lvi~G-~g~~~~~l~~~~~~~~l~-~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa- 78 (222)
+|+++|+|+| +|+.++.++++++++++. ++|+|+|+++++++..+|+.+|++|+||.. +||++++|||+||+|||+
T Consensus 404 ~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~ 482 (568)
T 2vsy_A 404 VPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTT 482 (568)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEec
Confidence 5899999999 999999999999999998 999999999999999999999999999999 999999999999999999
Q ss_pred ------eCCC-------CccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHH--HhcCCHHHHHHHHHH
Q 027511 79 ------TRVG-------GVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERM--KKLYNWHDVAKRTEI 141 (222)
Q Consensus 79 ------~~~g-------g~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~--~~~fs~~~~~~~~~~ 141 (222)
++.| |.+|++.+ |+++++++|.++++++. ..++.++++.+ .+.|+|+.+++++++
T Consensus 483 ~g~~~~s~~~~~~l~~~g~~e~v~~--------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 554 (568)
T 2vsy_A 483 PGETFAARVAGSLNHHLGLDEMNVA--------DDAAFVAKAVALASDPAALTALHARVDVLRRASGVFHMDGFADDFGA 554 (568)
T ss_dssp CCSSGGGSHHHHHHHHHTCGGGBCS--------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHCCChhhhcC--------CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHH
Confidence 9999 99998866 89999999999999876 56777888887 688999999999999
Q ss_pred HHHHHhcCC
Q 027511 142 VYDRALECP 150 (222)
Q Consensus 142 ~~~~~~~~~ 150 (222)
+|+++++..
T Consensus 555 ~y~~~~~~~ 563 (568)
T 2vsy_A 555 LLQALARRH 563 (568)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 999987654
No 16
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.89 E-value=2.2e-23 Score=163.61 Aligned_cols=125 Identities=24% Similarity=0.352 Sum_probs=112.3
Q ss_pred CCceEEEEEcCCc--cHHHHHHHHHHcCCCCcEEE-eCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 2 RVKVRFIVGGDGP--KRVRLEEMREKHSLQDRVEM-LGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 2 ~p~~~lvi~G~g~--~~~~l~~~~~~~~l~~~V~~-~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
+|+++|+|+|+|+ ..+++++++++++ +|+| +|+++++++..+|+.||++|+||..|+||++++|||+||+|||+
T Consensus 68 ~~~~~l~i~G~~~~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~ 144 (200)
T 2bfw_A 68 FQEMRFIIIGKGDPELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA 144 (200)
T ss_dssp GGGEEEEEECCBCHHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCChHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEE
Confidence 4799999999998 8889999999887 8999 99999999999999999999999999999999999999999999
Q ss_pred eCCCCccccccCCceEEeCC--CHHHHHHHHHHHHh-cCC--CCCHHHHHHHHHhcCC
Q 027511 79 TRVGGVPEVLPDDMVVLAEP--DPGDMVLAIRKAIS-LLP--KIDPQVMHERMKKLYN 131 (222)
Q Consensus 79 ~~~gg~~e~i~~~~~g~~~~--~~~~la~~i~~ll~-~~~--~~~~~~~~~~~~~~fs 131 (222)
++.|+..|++ ++.+|+..+ |+++++++|.++++ ++. ..++.++++.+.+ ||
T Consensus 145 ~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 145 SAVGGLRDII-TNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp ESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred eCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-cC
Confidence 9999999999 665554433 99999999999999 766 6677888888777 75
No 17
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.89 E-value=1e-22 Score=157.76 Aligned_cols=123 Identities=17% Similarity=0.185 Sum_probs=110.1
Q ss_pred CceEEEEEcCCccHHHHHHHHH--HcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 3 VKVRFIVGGDGPKRVRLEEMRE--KHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~--~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
|+++|+|+|+|+..++++++++ ++++.++|.|+|+++++++..+|+.||++|+||..|+||++++|||+||+|||+++
T Consensus 49 ~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~ 128 (177)
T 2f9f_A 49 QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVN 128 (177)
T ss_dssp TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEES
T ss_pred CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeC
Confidence 6889999999998889999998 88899999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCceEEe-CCCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 027511 81 VGGVPEVLPDDMVVLA-EPDPGDMVLAIRKAISLLPKIDPQVMHERM 126 (222)
Q Consensus 81 ~gg~~e~i~~~~~g~~-~~~~~~la~~i~~ll~~~~~~~~~~~~~~~ 126 (222)
.|+..|++.++.+|+. ..|+++++++|.++++++. .+.+++++++
T Consensus 129 ~~~~~e~i~~~~~g~~~~~d~~~l~~~i~~l~~~~~-~~~~~~~~~a 174 (177)
T 2f9f_A 129 EGGFKETVINEKTGYLVNADVNEIIDAMKKVSKNPD-KFKKDCFRRA 174 (177)
T ss_dssp SHHHHHHCCBTTTEEEECSCHHHHHHHHHHHHHCTT-TTHHHHHHHH
T ss_pred CCCHHHHhcCCCccEEeCCCHHHHHHHHHHHHhCHH-HHHHHHHHHH
Confidence 9999999998766644 5699999999999999876 2355555544
No 18
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.88 E-value=2.1e-23 Score=177.67 Aligned_cols=141 Identities=18% Similarity=0.274 Sum_probs=124.5
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG 82 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g 82 (222)
|+++|+|+|+|+ .+.++++++++++.++|.|+|+ .+++..+|+.||++|+||..|+||++++|||+||+|||+++.|
T Consensus 227 ~~~~l~i~G~g~-~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~ 303 (374)
T 2iw1_A 227 HNTLLFVVGQDK-PRKFEALAEKLGVRSNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVC 303 (374)
T ss_dssp HTEEEEEESSSC-CHHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTS
T ss_pred CceEEEEEcCCC-HHHHHHHHHHcCCCCcEEECCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCC
Confidence 689999999987 4788999999999999999998 5889999999999999999999999999999999999999999
Q ss_pred CccccccCCceEEeC--C-CHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q 027511 83 GVPEVLPDDMVVLAE--P-DPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRAL 147 (222)
Q Consensus 83 g~~e~i~~~~~g~~~--~-~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~ 147 (222)
|..|++.++.+|+.. + |+++++++|.+++++++ ..++.++++.+. .|+|..+.+++.++++..+
T Consensus 304 ~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 304 GYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYAD-TQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp TTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-HSCCSCHHHHHHHHHHCC-
T ss_pred CchhhhccCCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHhh
Confidence 999999988776543 3 89999999999999876 566777777776 4799999999999887543
No 19
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.87 E-value=1.7e-23 Score=182.91 Aligned_cols=134 Identities=13% Similarity=0.077 Sum_probs=106.2
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG 83 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg 83 (222)
+++|+|+|+|+.+ .++++.++|+|+|+++.+++..+|++||+||+||..|+||++++||||||+|||++ .||
T Consensus 276 ~~~l~ivG~~~~~-------~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g 347 (413)
T 2x0d_A 276 EWKIISVGEKHKD-------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYE 347 (413)
T ss_dssp GCEEEEEESCCCC-------EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBT
T ss_pred ceEEEEEcCCchh-------hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCC
Confidence 4899999998764 34567789999999999999999999999999999999999999999999999995 466
Q ss_pred ccccccCCceEE-eCC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511 84 VPEVLPDDMVVL-AEP-DPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE 148 (222)
Q Consensus 84 ~~e~i~~~~~g~-~~~-~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 148 (222)
..|++.++.+|+ +++ |+++++++|.+++++++.... ++++. .+.|+|+.+.++ .+.|+++..
T Consensus 348 ~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~~-~~~~~-~~~~~W~~~~~~-~~~~~~l~~ 411 (413)
T 2x0d_A 348 NKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDV-DKKES-SNMMFYINEFNE-FSFIKEIEE 411 (413)
T ss_dssp TBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC--------CC-BSCGGGCCCC----TTHHHHHT
T ss_pred cchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHHH-hHHHH-HHhCCHHHHHHH-HHHHHHHHh
Confidence 789999887775 443 999999999999999872222 34443 357999999887 666666653
No 20
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.83 E-value=2.1e-21 Score=169.13 Aligned_cols=128 Identities=20% Similarity=0.258 Sum_probs=110.5
Q ss_pred CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHH-------HhCC
Q 027511 2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAA-------SCGL 74 (222)
Q Consensus 2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAm-------a~G~ 74 (222)
.|+++|+|+|+|+ ++++++.++|.|+|+++++++..+|++||++|+||..|+||++++||| |||+
T Consensus 245 ~~~~~l~ivG~g~--------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~ 316 (406)
T 2hy7_A 245 FPQVTFHVIGSGM--------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGL 316 (406)
T ss_dssp CTTEEEEEESCSS--------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTC
T ss_pred CCCeEEEEEeCch--------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCC
Confidence 5899999999997 566788899999999999999999999999999999999999999999 9999
Q ss_pred cEEEeCCCCccccccCCceE-E-eC-CCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHH--HHHHhcC
Q 027511 75 LTVSTRVGGVPEVLPDDMVV-L-AE-PDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIV--YDRALEC 149 (222)
Q Consensus 75 PvVa~~~gg~~e~i~~~~~g-~-~~-~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~--~~~~~~~ 149 (222)
|||+|+. +.++.+| + +. .|+++++++|.++++++.. ...+.|+|+.+++++.++ |+++...
T Consensus 317 PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~~--------~~~~~~sw~~~a~~~~~~~~y~~~~~~ 382 (406)
T 2hy7_A 317 PAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQALEAPRV--------RYRQCLNWSDTTDRVLDPRAYPETRLY 382 (406)
T ss_dssp CEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHHHHCCCC--------CCSCCCBHHHHHHHHHCGGGSGGGBSS
T ss_pred cEEEehh------cccCcceEEEeCCCCHHHHHHHHHHHHhCcch--------hhhhcCCHHHHHHHHHHhhcccccCcC
Confidence 9999988 4455444 3 34 4999999999999998761 335789999999999999 9887654
Q ss_pred CC
Q 027511 150 PN 151 (222)
Q Consensus 150 ~~ 151 (222)
+.
T Consensus 383 ~~ 384 (406)
T 2hy7_A 383 PH 384 (406)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 21
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.79 E-value=1.3e-18 Score=154.72 Aligned_cols=140 Identities=11% Similarity=0.111 Sum_probs=111.5
Q ss_pred ceEEEEEcC-----CccH----HHHHHHHHHc----CCC--CcEE-EeCCCChhHHHHHHHhccEEEEcCCCccccHHHH
Q 027511 4 KVRFIVGGD-----GPKR----VRLEEMREKH----SLQ--DRVE-MLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~-----g~~~----~~l~~~~~~~----~l~--~~V~-~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~il 67 (222)
+++|+++|+ |+.+ +++++++.++ +.. ..|+ +.|.++.+++..+|+.||++|+||..|+||++++
T Consensus 290 ~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~l 369 (482)
T 1uqt_A 290 KIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAK 369 (482)
T ss_dssp TEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHH
T ss_pred cEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHH
Confidence 478999984 3333 3445554442 221 1355 5799999999999999999999999999999999
Q ss_pred HHHHhCC-----cEEEeCCCCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHH
Q 027511 68 EAASCGL-----LTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKR 138 (222)
Q Consensus 68 EAma~G~-----PvVa~~~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~ 138 (222)
||||||+ |||+|+.+|..+.+. + ..+++| |+++++++|.++++++. +.++.++++.+.+ |+|+..+++
T Consensus 370 EAmA~g~~~~~gpvV~S~~~G~~~~l~-~-g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-~s~~~~a~~ 446 (482)
T 1uqt_A 370 EYVAAQDPANPGVLVLSQFAGAANELT-S-ALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINHWQEC 446 (482)
T ss_dssp HHHHHSCTTSCCEEEEETTBGGGGTCT-T-SEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHH
T ss_pred HHHHhCCCCCCCCEEEECCCCCHHHhC-C-eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHH
Confidence 9999997 999999888888774 3 334545 99999999999998754 5567777777765 999999999
Q ss_pred HHHHHHHH
Q 027511 139 TEIVYDRA 146 (222)
Q Consensus 139 ~~~~~~~~ 146 (222)
+.+.|+++
T Consensus 447 ~l~~l~~~ 454 (482)
T 1uqt_A 447 FISDLKQI 454 (482)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhc
Confidence 99999876
No 22
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.76 E-value=1.6e-18 Score=149.36 Aligned_cols=128 Identities=9% Similarity=0.070 Sum_probs=107.7
Q ss_pred CCCceEEEEEcCCccH-HHHHHHHHHcCCC--------CcEEEeCCCChhHHHHHHHhccEEEEcCC-CccccHHHHHHH
Q 027511 1 MRVKVRFIVGGDGPKR-VRLEEMREKHSLQ--------DRVEMLGAVPHAQVRSVLISGHIFLNSSL-TEAFCIAILEAA 70 (222)
Q Consensus 1 ~~p~~~lvi~G~g~~~-~~l~~~~~~~~l~--------~~V~~~g~v~~~~~~~ll~~adv~v~~s~-~E~~g~~ilEAm 70 (222)
++|+++|+|+|+|+.+ ++++++++++++. ++|.+.|.. +++..+|+.||+++.||. .|.+|++++|||
T Consensus 222 ~~p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAm 299 (374)
T 2xci_A 222 TYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFVNIGGHNLLEPT 299 (374)
T ss_dssp TCTTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSSSSCCCCCHHHH
T ss_pred hCCCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcccCCCCcCHHHHH
Confidence 3689999999999987 5899999999886 468888864 789999999999888765 477899999999
Q ss_pred HhCCcEEEe-CCCCccccccC---CceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCC
Q 027511 71 SCGLLTVST-RVGGVPEVLPD---DMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYN 131 (222)
Q Consensus 71 a~G~PvVa~-~~gg~~e~i~~---~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs 131 (222)
|||+|||++ +.++.+|++.+ .+.++...|+++++++|.+++++ + ..++.++++.+.++++
T Consensus 300 A~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 300 CWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV-KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp TTTCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHH
T ss_pred HhCCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhccc
Confidence 999999974 78998987753 34556667999999999999998 7 6788888888877554
No 23
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.74 E-value=4.2e-18 Score=154.65 Aligned_cols=136 Identities=13% Similarity=0.143 Sum_probs=102.9
Q ss_pred HHHHHHHHHHcCCCCc------EEEe-CCCChh------HHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511 16 RVRLEEMREKHSLQDR------VEML-GAVPHA------QVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG 82 (222)
Q Consensus 16 ~~~l~~~~~~~~l~~~------V~~~-g~v~~~------~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g 82 (222)
.+.+...++++++.++ |.|+ ++++.. ++..+|++||+||+||.+|+||++++||||||+|||+++.|
T Consensus 472 ~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 472 NDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp GCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred ccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 3566777777777665 5555 666665 59999999999999999999999999999999999999999
Q ss_pred CccccccCCc-------eEE-e-C---CCHHHHHHHHHHHHhc----CC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511 83 GVPEVLPDDM-------VVL-A-E---PDPGDMVLAIRKAISL----LP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD 144 (222)
Q Consensus 83 g~~e~i~~~~-------~g~-~-~---~~~~~la~~i~~ll~~----~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 144 (222)
|+.|++.++. +|+ + . .++++++++|.+++.. .+ +....++..+..+.|+|+.++++|.++|+
T Consensus 552 G~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye 631 (725)
T 3nb0_A 552 GFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQ 631 (725)
T ss_dssp HHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHH
T ss_pred ChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999998752 343 3 2 2667777666666642 22 22233333445578999999999999999
Q ss_pred HHhcCCC
Q 027511 145 RALECPN 151 (222)
Q Consensus 145 ~~~~~~~ 151 (222)
.++....
T Consensus 632 ~aL~~~~ 638 (725)
T 3nb0_A 632 LALRRGY 638 (725)
T ss_dssp HHHHHHC
T ss_pred HHHhhcc
Confidence 9886443
No 24
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.74 E-value=2.4e-18 Score=146.73 Aligned_cols=134 Identities=12% Similarity=0.042 Sum_probs=103.7
Q ss_pred CCceEEEEEcCCccHHHHHHHHHHc-CCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 2 RVKVRFIVGGDGPKRVRLEEMREKH-SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 2 ~p~~~lvi~G~g~~~~~l~~~~~~~-~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
+|++++++ |.|+.. .+++.++++ +..++|.|+|+++..++..+|+.||++|.|| |.+++|||+||+|||+++
T Consensus 236 ~~~~~~i~-~~g~~~-~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~ 308 (375)
T 3beo_A 236 HEDVQVVY-PVHMNP-VVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLR 308 (375)
T ss_dssp CTTEEEEE-ECCSCH-HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECS
T ss_pred CCCeEEEE-eCCCCH-HHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEec
Confidence 57888655 666543 344444443 4346899999999999999999999999998 677999999999999996
Q ss_pred C-CCccccccCCceEE-eCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511 81 V-GGVPEVLPDDMVVL-AEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYD 144 (222)
Q Consensus 81 ~-gg~~e~i~~~~~g~-~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 144 (222)
. |+.+|++.++ +|+ +++|+++++++|.+++++++ ..++.++++.. +.|+|+.+++.+.++++
T Consensus 309 ~~~~~~e~v~~g-~g~~v~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 309 DTTERPEGIEAG-TLKLAGTDEETIFSLADELLSDKEAHDKMSKASNPYG-DGRASERIVEAILKHFN 374 (375)
T ss_dssp SCCSCHHHHHTT-SEEECCSCHHHHHHHHHHHHHCHHHHHHHCCCCCTTC-CSCHHHHHHHHHHHHTT
T ss_pred CCCCCceeecCC-ceEEcCCCHHHHHHHHHHHHhChHhHhhhhhcCCCCC-CCcHHHHHHHHHHHHhh
Confidence 4 9999999888 555 44699999999999999865 33333333333 57999999998887653
No 25
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.73 E-value=4.5e-18 Score=144.54 Aligned_cols=133 Identities=9% Similarity=0.006 Sum_probs=107.6
Q ss_pred ceE-EEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511 4 KVR-FIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG 82 (222)
Q Consensus 4 ~~~-lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g 82 (222)
+++ ++++|+|+ .++++++++++++. +|.|+|++ +++..+|+.||++|.||. |++++|||+||+|||+++.+
T Consensus 212 ~~~~l~i~G~~~-~~~l~~~~~~~~~~-~v~~~g~~--~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~ 283 (364)
T 1f0k_A 212 SVTIWHQSGKGS-QQSVEQAYAEAGQP-QHKVTEFI--DDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPFQ 283 (364)
T ss_dssp GEEEEEECCTTC-HHHHHHHHHHTTCT-TSEEESCC--SCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCCC
T ss_pred CcEEEEEcCCch-HHHHHHHHhhcCCC-ceEEecch--hhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeCC
Confidence 567 57789887 57888888888874 79999998 789999999999999983 99999999999999999999
Q ss_pred Ccc--------ccccCCceEEeCC--C--HHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511 83 GVP--------EVLPDDMVVLAEP--D--PGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE 148 (222)
Q Consensus 83 g~~--------e~i~~~~~g~~~~--~--~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 148 (222)
|.+ +++.++. |+..+ | +++++++|.++ +++ ..++.++++.+ +.|+|+.++++++++|++...
T Consensus 284 g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~y~~~~~ 359 (364)
T 1f0k_A 284 HKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAAS-IPDATERVANEVSRVARALEH 359 (364)
T ss_dssp CTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHHTTC--
T ss_pred CCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh-ccCHHHHHHHHHHHHHHHHHh
Confidence 875 4666666 55443 5 89999999988 444 45566666554 589999999999999976543
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.72 E-value=4.6e-19 Score=151.72 Aligned_cols=140 Identities=11% Similarity=0.020 Sum_probs=106.5
Q ss_pred CCceEEEEE-cCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 2 RVKVRFIVG-GDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 2 ~p~~~lvi~-G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
+|+++|+++ |+++ .++.+++++. ..++|.|+|+++.+++..+|+.||++|.|| |.+++|||+||+|||++
T Consensus 236 ~~~~~l~i~~g~~~~~~~~l~~~~~---~~~~v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~ 307 (384)
T 1vgv_A 236 HQDIQIVYPVHLNPNVREPVNRILG---HVKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVM 307 (384)
T ss_dssp CTTEEEEEECCBCHHHHHHHHHHHT---TCTTEEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEE
T ss_pred CCCeEEEEEcCCCHHHHHHHHHHhh---cCCCEEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEc
Confidence 578999886 5443 3445555432 236899999998899999999999999999 44589999999999999
Q ss_pred CC-CCccccccCCceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCC
Q 027511 80 RV-GGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLYNWHDVAKRTEIVYDRALECP 150 (222)
Q Consensus 80 ~~-gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 150 (222)
+. |+.+|++.++.+.++.+|+++++++|.+++++++ ..++.++++. ...|+|+.+++.+.++|++..+..
T Consensus 308 ~~~~~~~e~v~~g~g~lv~~d~~~la~~i~~ll~d~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~ 380 (384)
T 1vgv_A 308 RDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPY-GDGQACSRILEALKNNRISLGSHH 380 (384)
T ss_dssp SSCCSCHHHHHHTSEEEECSSHHHHHHHHHHHHHCHHHHHHHHSSCCTT-CCSCHHHHHHHHHHHTCCCC----
T ss_pred cCCCCcchhhhCCceEEeCCCHHHHHHHHHHHHhChHHHhhhhhccCCC-cCCCHHHHHHHHHHHHHHhhcccc
Confidence 87 9999999888444455699999999999999865 3334334333 367999999999998887766543
No 27
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.68 E-value=4.2e-16 Score=138.24 Aligned_cols=141 Identities=13% Similarity=0.095 Sum_probs=111.5
Q ss_pred ceEEEEEc-----CCccHHH----HHHHHHHc----CCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHH
Q 027511 4 KVRFIVGG-----DGPKRVR----LEEMREKH----SLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAA 70 (222)
Q Consensus 4 ~~~lvi~G-----~g~~~~~----l~~~~~~~----~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAm 70 (222)
++.|+++| +++.+.+ +++++.+. +.. .|.|+|.++.+++..+|+.||++|+||..|+||++++|||
T Consensus 314 ~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~Eam 392 (496)
T 3t5t_A 314 KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAP 392 (496)
T ss_dssp TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHH
T ss_pred eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHH
Confidence 36688875 4444444 44444333 332 6999999999999999999999999999999999999999
Q ss_pred HhC---CcEEEeCCCCccccccCCceEEeCC-CHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511 71 SCG---LLTVSTRVGGVPEVLPDDMVVLAEP-DPGDMVLAIRKAISLLP---KIDPQVMHERMKKLYNWHDVAKRTEIVY 143 (222)
Q Consensus 71 a~G---~PvVa~~~gg~~e~i~~~~~g~~~~-~~~~la~~i~~ll~~~~---~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 143 (222)
||| .|+|.|+.+|..+.+.++. .++.| |+++++++|.++++++. +.+..+.++.+ ..++....++.+.+-+
T Consensus 393 A~~~~~g~lVlSe~aGa~~~l~~~a-llVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V-~~~d~~~W~~~fl~~L 470 (496)
T 3t5t_A 393 LVNERDADVILSETCGAAEVLGEYC-RSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAA-RPWTLEAWVQAQLDGL 470 (496)
T ss_dssp HHCSSCCEEEEETTBTTHHHHGGGS-EEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-TTCBHHHHHHHHHHHH
T ss_pred HhCCCCCCEEEeCCCCCHHHhCCCE-EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHH
Confidence 997 8999999999888885443 34555 99999999999999875 44556666666 5599999999988888
Q ss_pred HHHh
Q 027511 144 DRAL 147 (222)
Q Consensus 144 ~~~~ 147 (222)
+...
T Consensus 471 ~~~~ 474 (496)
T 3t5t_A 471 AADH 474 (496)
T ss_dssp HHHH
T ss_pred hhcc
Confidence 7664
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.60 E-value=2.6e-15 Score=128.18 Aligned_cols=136 Identities=15% Similarity=0.142 Sum_probs=103.7
Q ss_pred CCceEEEEE-cCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 2 RVKVRFIVG-GDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 2 ~p~~~lvi~-G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
+|+++++++ |+++ .++.+++++. ..++|.|+|+++..++..+|+.||++|.+| + |+ ++|||+||+|||++
T Consensus 228 ~~~~~lv~~~g~~~~~~~~l~~~~~---~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~ 299 (376)
T 1v4v_A 228 FPHLTFVYPVHLNPVVREAVFPVLK---GVRNFVLLDPLEYGSMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVL 299 (376)
T ss_dssp CTTSEEEEECCSCHHHHHHHHHHHT---TCTTEEEECCCCHHHHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEEC
T ss_pred CCCeEEEEECCCCHHHHHHHHHHhc---cCCCEEEECCCCHHHHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEec
Confidence 578899886 7665 4566666553 236899999998889999999999999998 2 44 88999999999987
Q ss_pred -CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511 80 -RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE 148 (222)
Q Consensus 80 -~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 148 (222)
+.|+..+++.++.+.++..|+++++++|.+++++++ ...+.. ...+.|++...++++.+.+.+.+.
T Consensus 300 ~~~~~~~~~~~~g~g~lv~~d~~~la~~i~~ll~d~~--~~~~~~-~~~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 300 RNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENPE--ELSRMR-KAKNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp SSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTCHH--HHHHHH-HSCCSSCCSCHHHHHHHHHHHHTT
T ss_pred cCCCcchhhhcCCceEECCCCHHHHHHHHHHHHhChH--hhhhhc-ccCCCCCCChHHHHHHHHHHHHhc
Confidence 578999988766444444699999999999998754 111111 123567777888888888888775
No 29
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.59 E-value=1e-15 Score=130.40 Aligned_cols=123 Identities=8% Similarity=-0.071 Sum_probs=97.0
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCC-------ccccHHHHHHHHhCCc
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLT-------EAFCIAILEAASCGLL 75 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~-------E~~g~~ilEAma~G~P 75 (222)
|+++|+|+|+|+.+ .++ +|.|+|++|++++..+++++|+.+..... ..+|.+++|+||||+|
T Consensus 198 ~~~~f~ivG~G~~~----------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~P 266 (339)
T 3rhz_A 198 YDIPLKVYTWQNVE----------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIP 266 (339)
T ss_dssp CSSCEEEEESCCCC----------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCC
T ss_pred CCCeEEEEeCCccc----------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCC
Confidence 78999999999875 244 89999999999999999988887765211 2468999999999999
Q ss_pred EEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHH
Q 027511 76 TVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAK 137 (222)
Q Consensus 76 vVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~ 137 (222)
||+++.|+..+++.++..|+..++.++++++|..+..+..+.++.++++.. +.+++..+++
T Consensus 267 VI~~~~~~~~~~v~~~~~G~~~~~~~e~~~~i~~l~~~~~~~m~~na~~~a-~~~~~~~f~k 327 (339)
T 3rhz_A 267 VIVQEGIANQELIENNGLGWIVKDVEEAIMKVKNVNEDEYIELVKNVRSFN-PILRKGFFTR 327 (339)
T ss_dssp EEEETTCTTTHHHHHHTCEEEESSHHHHHHHHHHCCHHHHHHHHHHHHHHT-HHHHTTHHHH
T ss_pred EEEccChhHHHHHHhCCeEEEeCCHHHHHHHHHHhCHHHHHHHHHHHHHHH-HHhhccHHHH
Confidence 999999999999999999998889999999998865432245555655543 3344444444
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.31 E-value=9.7e-12 Score=108.04 Aligned_cols=136 Identities=13% Similarity=0.116 Sum_probs=98.3
Q ss_pred CCceEEEEE-cCCccHHHHHHHHHH-cCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 2 RVKVRFIVG-GDGPKRVRLEEMREK-HSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 2 ~p~~~lvi~-G~g~~~~~l~~~~~~-~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
+|++++++. |.++ .+++.+++ ++..++|.++|+++..++..+|+.||++|.+| |...+|||++|+|+|+.
T Consensus 255 ~~~~~~v~~~~~~~---~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~ 326 (403)
T 3ot5_A 255 REDTELVYPMHLNP---AVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVL 326 (403)
T ss_dssp CTTEEEEEECCSCH---HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEEC
T ss_pred CCCceEEEecCCCH---HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEe
Confidence 588999987 5443 22333333 34456899999999899999999999999887 44448999999999998
Q ss_pred -CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q 027511 80 -RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALE 148 (222)
Q Consensus 80 -~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~ 148 (222)
+.|+.+|.+..+.+.++.+|++++++++.+++++++. ..+. ......|.....++++.+++.+.+.
T Consensus 327 ~~~~~~~e~v~~g~~~lv~~d~~~l~~ai~~ll~~~~~--~~~m-~~~~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 327 RDTTERPEGIEAGTLKLIGTNKENLIKEALDLLDNKES--HDKM-AQAANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp CSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHHCHHH--HHHH-HHSCCTTCCSCHHHHHHHHHHHHHT
T ss_pred cCCCcchhheeCCcEEEcCCCHHHHHHHHHHHHcCHHH--HHHH-HhhcCcccCCcHHHHHHHHHHHHhC
Confidence 7888889887775545555999999999999987541 1111 1122346666666777777766654
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.27 E-value=7.8e-12 Score=108.34 Aligned_cols=106 Identities=16% Similarity=0.135 Sum_probs=84.3
Q ss_pred CCceEEEEE-cCCccHHHHHHHHHH-cCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 2 RVKVRFIVG-GDGPKRVRLEEMREK-HSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 2 ~p~~~lvi~-G~g~~~~~l~~~~~~-~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
+|++++++. |.++. +++.+++ .+..++|.++++++..++..+|+.||++|.+| + |+ .+|||++|+|||++
T Consensus 261 ~~~~~~v~~~g~~~~---~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~-~~EA~a~G~PvV~~ 332 (396)
T 3dzc_A 261 HPECQILYPVHLNPN---VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G-GI-QEEAPSLGKPVLVM 332 (396)
T ss_dssp CTTEEEEEECCBCHH---HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S-GG-GTTGGGGTCCEEEC
T ss_pred CCCceEEEEeCCChH---HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c-cH-HHHHHHcCCCEEEc
Confidence 588999886 65532 2333333 34457899999998889999999999999998 2 33 38999999999998
Q ss_pred -CCCCccccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 027511 80 -RVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP 115 (222)
Q Consensus 80 -~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~ 115 (222)
+.++.+|++..+.+.++.+|++++++++.+++++++
T Consensus 333 ~~~~~~~e~v~~G~~~lv~~d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 333 RETTERPEAVAAGTVKLVGTNQQQICDALSLLLTDPQ 369 (396)
T ss_dssp CSSCSCHHHHHHTSEEECTTCHHHHHHHHHHHHHCHH
T ss_pred cCCCcchHHHHcCceEEcCCCHHHHHHHHHHHHcCHH
Confidence 788888999888776666689999999999998753
No 32
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.24 E-value=7e-12 Score=107.99 Aligned_cols=111 Identities=11% Similarity=0.059 Sum_probs=86.6
Q ss_pred CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeCC----C
Q 027511 28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAEP----D 99 (222)
Q Consensus 28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~~----~ 99 (222)
++++|.+.|++ ++..+|+.||++|..+ .+++++|||++|+|+|+...++ ..+.+.+...|+..+ |
T Consensus 290 ~~~~v~~~~~~---~~~~~l~~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~ 362 (412)
T 3otg_A 290 VPANVRLESWV---PQAALLPHVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS 362 (412)
T ss_dssp CCTTEEEESCC---CHHHHGGGCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC
T ss_pred CCCcEEEeCCC---CHHHHHhcCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCC
Confidence 45789999998 4889999999999665 3479999999999999976654 566666666665433 7
Q ss_pred HHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511 100 PGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDR 145 (222)
Q Consensus 100 ~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 145 (222)
+++++++|.+++++++ +....+..+.....++++.+++.+++++.+
T Consensus 363 ~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 363 PDSVSGAAKRLLAEESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 8999999999999877 334444555566778999999999888743
No 33
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.21 E-value=3.8e-12 Score=115.04 Aligned_cols=143 Identities=15% Similarity=0.058 Sum_probs=100.0
Q ss_pred CCceEEE--EEcC--CccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEE
Q 027511 2 RVKVRFI--VGGD--GPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTV 77 (222)
Q Consensus 2 ~p~~~lv--i~G~--g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvV 77 (222)
.|+..++ +.|+ |.....++ .+.+.|+.++|.|+|.++.++....|+.+|+++.|+... .|++.+|||+||+|||
T Consensus 468 vP~s~L~l~~~g~~~g~~~~~~~-~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~-GgtTtlEALwmGVPVV 545 (631)
T 3q3e_A 468 AKVKVHFHFALGQSNGITHPYVE-RFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFG-NTNGIIDMVTLGLVGV 545 (631)
T ss_dssp CSSEEEEEEEESSCCGGGHHHHH-HHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSC-CSHHHHHHHHTTCCEE
T ss_pred CCCcEEEEEecCCCchhhHHHHH-HHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCccc-CChHHHHHHHcCCCEE
Confidence 4666553 3563 34444444 455678888999999999999999999999999998664 4999999999999999
Q ss_pred EeCCCCcccccc------CCceE-EeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh--cCCHHHHHHHHHHHHHHH
Q 027511 78 STRVGGVPEVLP------DDMVV-LAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKK--LYNWHDVAKRTEIVYDRA 146 (222)
Q Consensus 78 a~~~gg~~e~i~------~~~~g-~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~ 146 (222)
+...+++.+-+. -|... ++..|.+++++...++.++++ ..+.++.+++... .|+ ...+++++.|+++
T Consensus 546 Tl~G~~~asRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~ 623 (631)
T 3q3e_A 546 CKTGAEVHEHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAENHQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEK 623 (631)
T ss_dssp EECCSSHHHHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHH
T ss_pred eccCCcHHHHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHH
Confidence 987766655443 23333 366789999999999999976 3333333333222 333 3445666666555
Q ss_pred hc
Q 027511 147 LE 148 (222)
Q Consensus 147 ~~ 148 (222)
++
T Consensus 624 ~~ 625 (631)
T 3q3e_A 624 LN 625 (631)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.21 E-value=1.3e-11 Score=107.17 Aligned_cols=131 Identities=12% Similarity=0.022 Sum_probs=91.6
Q ss_pred CceEE-EEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 3 VKVRF-IVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 3 p~~~l-vi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
|++++ +++|+|+..+.++ .++++|.+.|++++. .+|..+|++|..+ .+++++|||++|+|+|+...
T Consensus 261 ~~~~~~~~~G~~~~~~~l~------~~~~~v~~~~~~~~~---~~l~~ad~~v~~~----G~~t~~Ea~~~G~P~i~~p~ 327 (430)
T 2iyf_A 261 PGWHLVLQIGRKVTPAELG------ELPDNVEVHDWVPQL---AILRQADLFVTHA----GAGGSQEGLATATPMIAVPQ 327 (430)
T ss_dssp TTEEEEEECC---CGGGGC------SCCTTEEEESSCCHH---HHHTTCSEEEECC----CHHHHHHHHHTTCCEEECCC
T ss_pred CCeEEEEEeCCCCChHHhc------cCCCCeEEEecCCHH---HHhhccCEEEECC----CccHHHHHHHhCCCEEECCC
Confidence 56777 5678876544332 246789999999765 7899999999754 24789999999999999987
Q ss_pred CC----ccccccCCceEEeCC----CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 027511 82 GG----VPEVLPDDMVVLAEP----DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDRA 146 (222)
Q Consensus 82 gg----~~e~i~~~~~g~~~~----~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~ 146 (222)
++ ..+.+.+.+.|+..+ ++++++++|.+++++++ +....+..+...+.++++.+++.+++++++.
T Consensus 328 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 401 (430)
T 2iyf_A 328 AVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQEGGTRRAADLIEAELPAR 401 (430)
T ss_dssp SHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC-
T ss_pred ccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhcc
Confidence 65 345555555565443 78999999999998865 3233333334445678888888887776544
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.18 E-value=1.9e-11 Score=105.14 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=87.9
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC---
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR--- 80 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~--- 80 (222)
+++++++|+++..+.++ .++++|.+.|+++ ...+|..||++|. .+.+.+++|||++|+|+|+..
T Consensus 264 ~~~~v~~~~~~~~~~l~------~~~~~v~~~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~ 330 (398)
T 4fzr_A 264 GFEVVVAVSDKLAQTLQ------PLPEGVLAAGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIA 330 (398)
T ss_dssp TCEEEECCCC--------------CCTTEEEESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSG
T ss_pred CCEEEEEeCCcchhhhc------cCCCcEEEeCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCch
Confidence 56788888776543333 3467999999985 6788999999994 455789999999999999954
Q ss_pred -CCCccccccCCceEEeCC----CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHH
Q 027511 81 -VGGVPEVLPDDMVVLAEP----DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTE 140 (222)
Q Consensus 81 -~gg~~e~i~~~~~g~~~~----~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~ 140 (222)
..+..+.+.+.+.|+..+ ++++++++|.++++++. +....+..+......+++.+++.++
T Consensus 331 ~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 331 EVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYVGNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp GGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred hHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 446667777776665544 67999999999999877 4444555556667789888887764
No 36
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.17 E-value=2.8e-11 Score=103.72 Aligned_cols=130 Identities=12% Similarity=0.067 Sum_probs=95.1
Q ss_pred CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
+|+++++++|+++..+.+. +++++|.+.|+++..+ ++..||++|. ++.+.+++|||++|+|+|+...
T Consensus 248 ~p~~~~v~~~~~~~~~~l~------~~~~~v~~~~~~~~~~---ll~~ad~~v~----~~G~~t~~Ea~~~G~P~v~~p~ 314 (391)
T 3tsa_A 248 LPGVEAVIAVPPEHRALLT------DLPDNARIAESVPLNL---FLRTCELVIC----AGGSGTAFTATRLGIPQLVLPQ 314 (391)
T ss_dssp STTEEEEEECCGGGGGGCT------TCCTTEEECCSCCGGG---TGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCC
T ss_pred CCCeEEEEEECCcchhhcc------cCCCCEEEeccCCHHH---HHhhCCEEEe----CCCHHHHHHHHHhCCCEEecCC
Confidence 4789999998876543332 3567899999987654 5599999994 4456789999999999999544
Q ss_pred ----CCccccccCCceEEeCC------CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511 82 ----GGVPEVLPDDMVVLAEP------DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYD 144 (222)
Q Consensus 82 ----gg~~e~i~~~~~g~~~~------~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 144 (222)
.+..+.+.+.+.|+..+ +++++++++.++++++. +....+..+......+++.+++.++++..
T Consensus 315 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 315 YFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp STTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred cccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 34555566665554332 68999999999999877 44445555666778899888887776553
No 37
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.98 E-value=6e-10 Score=95.80 Aligned_cols=127 Identities=13% Similarity=0.104 Sum_probs=90.1
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEE----e
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVS----T 79 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa----~ 79 (222)
+++++++|+++..+.++ .++++|.+.|+++ ..++|..||++|. .+.+.++.|||++|+|+|+ .
T Consensus 263 ~~~~v~~~g~~~~~~l~------~~~~~v~~~~~~~---~~~ll~~ad~~v~----~~G~~t~~Eal~~G~P~v~~p~~~ 329 (398)
T 3oti_A 263 DADFVLALGDLDISPLG------TLPRNVRAVGWTP---LHTLLRTCTAVVH----HGGGGTVMTAIDAGIPQLLAPDPR 329 (398)
T ss_dssp SSEEEEECTTSCCGGGC------SCCTTEEEESSCC---HHHHHTTCSEEEE----CCCHHHHHHHHHHTCCEEECCCTT
T ss_pred CCEEEEEECCcChhhhc------cCCCcEEEEccCC---HHHHHhhCCEEEE----CCCHHHHHHHHHhCCCEEEcCCCc
Confidence 46777777665432222 3567899999985 5678999999994 4556789999999999999 5
Q ss_pred CCCCcc--ccccCCceEEeCCCHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511 80 RVGGVP--EVLPDDMVVLAEPDPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVY 143 (222)
Q Consensus 80 ~~gg~~--e~i~~~~~g~~~~~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 143 (222)
+..+.. +.+.+.+.|+..+..+.-.+.+.++++++. +....+..+......+++.+++.++++.
T Consensus 330 dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 330 DQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIGDESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp CCSSCTTHHHHHHHTSEEECCGGGCCHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCEEeeCCCCCCHHHHHHHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 667788 888877777655422112333337888766 4445566666778899999998887764
No 38
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.95 E-value=9.1e-10 Score=94.20 Aligned_cols=111 Identities=19% Similarity=0.113 Sum_probs=84.5
Q ss_pred CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC-----CCccccccCCceEEeCC----
Q 027511 28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV-----GGVPEVLPDDMVVLAEP---- 98 (222)
Q Consensus 28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~-----gg~~e~i~~~~~g~~~~---- 98 (222)
++++|.+.|++++. ++|..||++|..+- ..+++|||++|+|+|+... .+..+.+.+.+.|...+
T Consensus 279 ~~~~v~~~~~~~~~---~ll~~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~ 351 (402)
T 3ia7_A 279 LPPNVEAHQWIPFH---SVLAHARACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQL 351 (402)
T ss_dssp CCTTEEEESCCCHH---HHHTTEEEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGC
T ss_pred CCCcEEEecCCCHH---HHHhhCCEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCC
Confidence 45789999998765 89999999996553 4788999999999995443 45666666666665443
Q ss_pred CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 027511 99 DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYDR 145 (222)
Q Consensus 99 ~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~ 145 (222)
+++++++++.+++++++ +....+..+......+++..++.+++++.+
T Consensus 352 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 352 EPASIREAVERLAADSAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 78999999999999876 334455555666778888888888887754
No 39
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.93 E-value=9.7e-10 Score=83.64 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=63.3
Q ss_pred CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC----CccccccCCceEEeCC----C
Q 027511 28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG----GVPEVLPDDMVVLAEP----D 99 (222)
Q Consensus 28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g----g~~e~i~~~~~g~~~~----~ 99 (222)
++++|.+.|++++.++..+ ..||++|.. +.++++.|||++|+|+|+.... +..+.+.+.+.|+..+ +
T Consensus 66 ~~~~v~~~~~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~ 140 (170)
T 2o6l_A 66 LGLNTRLYKWIPQNDLLGH-PKTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMS 140 (170)
T ss_dssp CCTTEEEESSCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCC
T ss_pred CCCcEEEecCCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCC
Confidence 4568999999987544332 899999963 4468999999999999998774 3455666666665444 7
Q ss_pred HHHHHHHHHHHHhcC
Q 027511 100 PGDMVLAIRKAISLL 114 (222)
Q Consensus 100 ~~~la~~i~~ll~~~ 114 (222)
+++++++|.++++++
T Consensus 141 ~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 141 STDLLNALKRVINDP 155 (170)
T ss_dssp HHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHcCH
Confidence 899999999999874
No 40
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.89 E-value=2.1e-09 Score=91.85 Aligned_cols=126 Identities=13% Similarity=0.071 Sum_probs=84.9
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG 83 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg 83 (222)
+++++++++++..+.++ . ++++|.+ |+++. .++|..+|++|..+ .+++++|||++|+|+|+...++
T Consensus 244 ~~~~~~~~g~~~~~~l~----~--~~~~v~~-~~~~~---~~~l~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~ 309 (384)
T 2p6p_A 244 DVELIVAAPDTVAEALR----A--EVPQARV-GWTPL---DVVAPTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGS 309 (384)
T ss_dssp TCEEEEECCHHHHHHHH----H--HCTTSEE-ECCCH---HHHGGGCSEEEECS----CTTHHHHHHHTTCCEEECCCSH
T ss_pred CcEEEEEeCCCCHHhhC----C--CCCceEE-cCCCH---HHHHhhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcc
Confidence 56777765543333332 1 3578999 99865 45789999999753 3568999999999999988753
Q ss_pred ----ccccccCCceEEeCC----CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511 84 ----VPEVLPDDMVVLAEP----DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVY 143 (222)
Q Consensus 84 ----~~e~i~~~~~g~~~~----~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 143 (222)
..+.+.+.+.|+..+ ++++++++|.+++++++ +....+..+.+...-..+..+..++++.
T Consensus 310 dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 310 VLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 555555555554333 78999999999998865 3333444445555556666665555543
No 41
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=98.88 E-value=2.6e-09 Score=92.12 Aligned_cols=110 Identities=16% Similarity=0.098 Sum_probs=81.2
Q ss_pred CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC----CCccccccCCceEEeCC----C
Q 027511 28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV----GGVPEVLPDDMVVLAEP----D 99 (222)
Q Consensus 28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~----gg~~e~i~~~~~g~~~~----~ 99 (222)
++++|.+.|++++. .+|..||++|..+- ..+++|||++|+|+|+... ....+.+.+.+.+...+ +
T Consensus 295 ~~~~v~~~~~~~~~---~ll~~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~ 367 (415)
T 3rsc_A 295 LPPNVEAHRWVPHV---KVLEQATVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKAD 367 (415)
T ss_dssp CCTTEEEESCCCHH---HHHHHEEEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCC
T ss_pred CCCcEEEEecCCHH---HHHhhCCEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCC
Confidence 45789999998754 88999999996543 4688999999999998543 33455555555554333 7
Q ss_pred HHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511 100 PGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYD 144 (222)
Q Consensus 100 ~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 144 (222)
++++++++.+++++++ +....+..+......+.+..++.+++++.
T Consensus 368 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 368 GDTLLAAVGAVAADPALLARVEAMRGHVRRAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 8999999999999866 33445555566677888888888777664
No 42
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.86 E-value=3.2e-09 Score=92.66 Aligned_cols=128 Identities=16% Similarity=0.100 Sum_probs=90.1
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG 83 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg 83 (222)
+++++++++++..+.++ .++++|.+.|++++. .+|.+||++|. .+.++++.|||++|+|+|+....+
T Consensus 299 ~~~~v~~~g~~~~~~l~------~~~~~v~~~~~~~~~---~ll~~ad~~V~----~~G~~t~~Ea~~~G~P~i~~p~~~ 365 (441)
T 2yjn_A 299 DAEIIATFDAQQLEGVA------NIPDNVRTVGFVPMH---ALLPTCAATVH----HGGPGSWHTAAIHGVPQVILPDGW 365 (441)
T ss_dssp SSEEEECCCTTTTSSCS------SCCSSEEECCSCCHH---HHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSH
T ss_pred CCEEEEEECCcchhhhc------cCCCCEEEecCCCHH---HHHhhCCEEEE----CCCHHHHHHHHHhCCCEEEeCCcc
Confidence 45666665544322111 356789999999864 56899999996 344679999999999999987743
Q ss_pred ----ccccccCCceEEeCC----CHHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 027511 84 ----VPEVLPDDMVVLAEP----DPGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVYD 144 (222)
Q Consensus 84 ----~~e~i~~~~~g~~~~----~~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~~ 144 (222)
..+.+.+.+.|+..+ ++++++++|.++++++. +....+..+......+.+.+++.+++++.
T Consensus 366 dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 366 DTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 445555555554333 78999999999999866 33444455556677888888887777653
No 43
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.85 E-value=2.8e-08 Score=84.92 Aligned_cols=104 Identities=6% Similarity=0.051 Sum_probs=70.4
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG 83 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg 83 (222)
+++++..++....+.+.+..++.+. ++.+.+++ +++.++|+.||++|.-+ -++++.|+|++|+|+|....+.
T Consensus 211 ~~~vi~~~G~~~~~~~~~~~~~~~~--~~~v~~f~--~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~ 282 (365)
T 3s2u_A 211 RPAIRHQAGRQHAEITAERYRTVAV--EADVAPFI--SDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLVPLPH 282 (365)
T ss_dssp CCEEEEECCTTTHHHHHHHHHHTTC--CCEEESCC--SCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEECC---
T ss_pred ceEEEEecCccccccccceeccccc--ccccccch--hhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEeccCC
Confidence 3444433322344555666665554 57788997 68999999999999543 4789999999999999766543
Q ss_pred cc--------c-cccCCceEEeCC---CHHHHHHHHHHHHhcCC
Q 027511 84 VP--------E-VLPDDMVVLAEP---DPGDMVLAIRKAISLLP 115 (222)
Q Consensus 84 ~~--------e-~i~~~~~g~~~~---~~~~la~~i~~ll~~~~ 115 (222)
.. + +...+...++.. +++.|+++|.+++++++
T Consensus 283 ~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~ 326 (365)
T 3s2u_A 283 AIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPE 326 (365)
T ss_dssp --CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTH
T ss_pred CCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHH
Confidence 21 2 334444434432 68999999999999987
No 44
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.84 E-value=1.4e-08 Score=87.64 Aligned_cols=103 Identities=16% Similarity=0.193 Sum_probs=78.9
Q ss_pred ceEEEEEcCCccHHHHHHHHHHc-C-C--CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKH-S-L--QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~-~-l--~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
++++++... + .+++.++++ + + .++|.+.+.++..++..+|+.||+++..| |....||+++|+|+|..
T Consensus 237 ~~~vv~p~~-p---~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~ 307 (385)
T 4hwg_A 237 NFLIIFSTH-P---RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GTITEEASILNLPALNI 307 (385)
T ss_dssp CCEEEEEEC-H---HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEEC
T ss_pred CeEEEEECC-h---HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEc
Confidence 455555443 2 355555554 3 2 36899999998889999999999999666 44679999999999987
Q ss_pred CCC-CccccccCCceEEeCCCHHHHHHHHHHHHhcCC
Q 027511 80 RVG-GVPEVLPDDMVVLAEPDPGDMVLAIRKAISLLP 115 (222)
Q Consensus 80 ~~g-g~~e~i~~~~~g~~~~~~~~la~~i~~ll~~~~ 115 (222)
+.. +.+|.+..+.+.++..|++++++++.++++++.
T Consensus 308 ~~~ter~e~v~~G~~~lv~~d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 308 REAHERPEGMDAGTLIMSGFKAERVLQAVKTITEEHD 344 (385)
T ss_dssp SSSCSCTHHHHHTCCEECCSSHHHHHHHHHHHHTTCB
T ss_pred CCCccchhhhhcCceEEcCCCHHHHHHHHHHHHhChH
Confidence 654 367888777665565699999999999999876
No 45
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=98.66 E-value=5.8e-08 Score=84.01 Aligned_cols=109 Identities=16% Similarity=0.057 Sum_probs=75.2
Q ss_pred CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeCC----C
Q 027511 28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAEP----D 99 (222)
Q Consensus 28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~~----~ 99 (222)
++++|.+.+++++. .+|..+|++|.- +-.++++|||++|+|+|+....+ ..+.+.+.+.|+..+ +
T Consensus 303 ~~~~v~~~~~~~~~---~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~ 375 (424)
T 2iya_A 303 VPPNVEVHQWVPQL---DILTKASAFITH----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVT 375 (424)
T ss_dssp CCTTEEEESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCC
T ss_pred CCCCeEEecCCCHH---HHHhhCCEEEEC----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCC
Confidence 46789999999765 689999999853 33579999999999999987643 334444445554433 7
Q ss_pred HHHHHHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHHHH
Q 027511 100 PGDMVLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEIVY 143 (222)
Q Consensus 100 ~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~~~ 143 (222)
+++++++|.+++++++ +....+..+.+......+..++.+++++
T Consensus 376 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 376 AEKLREAVLAVASDPGVAERLAAVRQEIREAGGARAAADILEGIL 420 (424)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 8999999999998865 2233333334444555566655555544
No 46
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.54 E-value=4.5e-07 Score=84.19 Aligned_cols=146 Identities=11% Similarity=0.024 Sum_probs=110.0
Q ss_pred CCceEEEEEcC-CccHHHHHHHHHHcCCC-CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 2 RVKVRFIVGGD-GPKRVRLEEMREKHSLQ-DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 2 ~p~~~lvi~G~-g~~~~~l~~~~~~~~l~-~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.|+.+|++... ......+++.+++.|+. +||.|.+..+.++....++.+|+++-|.-+- -+++..||+++|+|||+-
T Consensus 550 vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~-g~tT~~eal~~GvPvvt~ 628 (723)
T 4gyw_A 550 VPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGTPMVTM 628 (723)
T ss_dssp CSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSEEECCSSSC-CSHHHHHHHHTTCCEEBC
T ss_pred CCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeEEeCCCCcC-CHHHHHHHHHcCCCEEEc
Confidence 58899988764 34457788888888874 6899999999999999999999999886664 478999999999999986
Q ss_pred CCCCccccccC------CceEEeCCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHh--cCCHHHHHHHHHHHHHHHhc
Q 027511 80 RVGGVPEVLPD------DMVVLAEPDPGDMVLAIRKAISLLP--KIDPQVMHERMKK--LYNWHDVAKRTEIVYDRALE 148 (222)
Q Consensus 80 ~~gg~~e~i~~------~~~g~~~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~~~~ 148 (222)
....+..=+.. |..-++..|.++..+.-.++..+++ .....+.++.... -|+-..+++.+++.|+.+..
T Consensus 629 ~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~ 707 (723)
T 4gyw_A 629 PGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWE 707 (723)
T ss_dssp CCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHH
Confidence 64433322111 1122567789999999999998876 3333444444433 69999999999999998854
No 47
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.26 E-value=7.3e-07 Score=76.09 Aligned_cols=107 Identities=12% Similarity=0.078 Sum_probs=73.2
Q ss_pred CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeCCCHHHH
Q 027511 28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAEPDPGDM 103 (222)
Q Consensus 28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~~~~~~l 103 (222)
++++|.+.+++|+. .+|..+|+||. .+..+++.|||++|+|+|+....+ +.+.+.+.+.|+..++.+..
T Consensus 286 ~~~~v~~~~~~p~~---~lL~~~~~~v~----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~ 358 (400)
T 4amg_A 286 LPANVRVVEWIPLG---ALLETCDAIIH----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSLG 358 (400)
T ss_dssp CCTTEEEECCCCHH---HHHTTCSEEEE----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTCS
T ss_pred CCCCEEEEeecCHH---HHhhhhhheec----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCch
Confidence 46789999999754 57889999983 455678999999999999865543 33444455566666666667
Q ss_pred HHHHHHHHhcCC-CCCHHHHHHHHHhcCCHHHHHHHHHH
Q 027511 104 VLAIRKAISLLP-KIDPQVMHERMKKLYNWHDVAKRTEI 141 (222)
Q Consensus 104 a~~i~~ll~~~~-~~~~~~~~~~~~~~fs~~~~~~~~~~ 141 (222)
+++|.++++++. +....+.++.++..=+....++.+++
T Consensus 359 ~~al~~lL~d~~~r~~a~~l~~~~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 359 AEQCRRLLDDAGLREAALRVRQEMSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 889999999866 33344444455555555555555544
No 48
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.18 E-value=8.4e-07 Score=76.63 Aligned_cols=110 Identities=11% Similarity=-0.028 Sum_probs=74.0
Q ss_pred CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeCC----CH
Q 027511 29 QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAEP----DP 100 (222)
Q Consensus 29 ~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~~----~~ 100 (222)
+++|.+.+++++.+ +|.++|++|.. +-.+++.|||++|+|+|+....+ ..+.+.+.+.|+..+ ++
T Consensus 284 ~~~v~~~~~~~~~~---~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~ 356 (415)
T 1iir_A 284 GADCFAIGEVNHQV---LFGRVAAVIHH----GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTF 356 (415)
T ss_dssp GGGEEECSSCCHHH---HGGGSSEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCH
T ss_pred CCCEEEeCcCChHH---HHhhCCEEEeC----CChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCH
Confidence 45799999998754 57999999963 33479999999999999987654 344454444454332 78
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Q 027511 101 GDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALEC 149 (222)
Q Consensus 101 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 149 (222)
++++++|.++ ++++ ...++. ...+.+....-.++..+.+++++..
T Consensus 357 ~~l~~~i~~l-~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 357 DSLSAALATA-LTPE--THARAT-AVAGTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HHHHHHHHHH-TSHH--HHHHHH-HHHHHSCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHH-cCHH--HHHHHH-HHHHHHhhcChHHHHHHHHHHHHhc
Confidence 9999999999 7643 222232 2333344455666666666666553
No 49
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.06 E-value=1.8e-05 Score=73.25 Aligned_cols=145 Identities=16% Similarity=0.072 Sum_probs=99.3
Q ss_pred CceEEEEEcCCccH----HHHHHHHHHc--------CCCC--cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHH
Q 027511 3 VKVRFIVGGDGPKR----VRLEEMREKH--------SLQD--RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAI 66 (222)
Q Consensus 3 p~~~lvi~G~g~~~----~~l~~~~~~~--------~l~~--~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~i 66 (222)
..++|+++|.+... +.+.+++... ..++ +|.|+...+-+--..++.+||++++||+ +|++|+.=
T Consensus 564 ~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~ 643 (796)
T 1l5w_A 564 VPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGN 643 (796)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHH
T ss_pred CCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence 35899999976532 2222222222 3556 8999988888888889999999999999 99999999
Q ss_pred HHHHHhCCcEEEeCCCCccccccC--CceEEeCC-CHHHHHHHHHH---HHhcCC-CCCHHHHH-HHHHhcCCHHHHHHH
Q 027511 67 LEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDMVLAIRK---AISLLP-KIDPQVMH-ERMKKLYNWHDVAKR 138 (222)
Q Consensus 67 lEAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~-~~~~la~~i~~---ll~~~~-~~~~~~~~-~~~~~~fs~~~~~~~ 138 (222)
+=+|..|++.|++--|...|+..+ ..++|... +++++.+.-.. ..+-.. .....+.. ......|||..- ..
T Consensus 644 MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~ 722 (796)
T 1l5w_A 644 MKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK-HA 722 (796)
T ss_dssp HHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT-TT
T ss_pred HHHHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH-HH
Confidence 999999999999999999888754 35667666 55555532111 111000 11122222 233467999875 77
Q ss_pred HHHHHHHHhc
Q 027511 139 TEIVYDRALE 148 (222)
Q Consensus 139 ~~~~~~~~~~ 148 (222)
+..+|++++.
T Consensus 723 y~~Ly~~L~~ 732 (796)
T 1l5w_A 723 FDQMLHSIGK 732 (796)
T ss_dssp THHHHHHTST
T ss_pred HHHHHHHHhc
Confidence 9999998875
No 50
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=97.97 E-value=1e-05 Score=74.94 Aligned_cols=144 Identities=11% Similarity=0.050 Sum_probs=98.4
Q ss_pred CceEEEEEcCCccH----HH----HHHHHH----HcCCCC--cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHH
Q 027511 3 VKVRFIVGGDGPKR----VR----LEEMRE----KHSLQD--RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAI 66 (222)
Q Consensus 3 p~~~lvi~G~g~~~----~~----l~~~~~----~~~l~~--~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~i 66 (222)
..++|+++|.+... +. +.++++ .-..++ +|.|+...+-+--..++.+||++++||+ +|++|+.=
T Consensus 554 ~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~ 633 (796)
T 2c4m_A 554 PARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSN 633 (796)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHH
T ss_pred CCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence 36899999976532 22 222332 114566 8999998888888899999999999999 99999999
Q ss_pred HHHHHhCCcEEEeCCCCccccccC--CceEEeCC----CHHHHHHHHHHHHhcCC-CCCHHHHHHHH-HhcCCHHHHHHH
Q 027511 67 LEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP----DPGDMVLAIRKAISLLP-KIDPQVMHERM-KKLYNWHDVAKR 138 (222)
Q Consensus 67 lEAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~----~~~~la~~i~~ll~~~~-~~~~~~~~~~~-~~~fs~~~~~~~ 138 (222)
+=+|..|++.|++--|...|+... ..++|... +++++... .+..+-.. .....+....+ ...|||..- ..
T Consensus 634 MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~ 711 (796)
T 2c4m_A 634 MKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNS-GL 711 (796)
T ss_dssp HHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTC-CH
T ss_pred HHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCH-HH
Confidence 999999999999998988888654 24555443 44555443 22211111 11222222222 357888776 77
Q ss_pred HHHHHHHHhc
Q 027511 139 TEIVYDRALE 148 (222)
Q Consensus 139 ~~~~~~~~~~ 148 (222)
+..+|++++.
T Consensus 712 y~~Ly~~L~~ 721 (796)
T 2c4m_A 712 FYDLKHSLIH 721 (796)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 51
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=97.91 E-value=3.6e-06 Score=72.63 Aligned_cols=79 Identities=9% Similarity=0.002 Sum_probs=58.0
Q ss_pred CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCCceEEeC----CC
Q 027511 28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDDMVVLAE----PD 99 (222)
Q Consensus 28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~~~g~~~----~~ 99 (222)
++++|.+.+++++ .++|.++|++|. .+-.+++.||+++|+|+|+....+ ..+.+.+.+.|+.. .+
T Consensus 284 ~~~~v~~~~~~~~---~~ll~~~d~~v~----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~ 356 (416)
T 1rrv_A 284 DRDDCFAIDEVNF---QALFRRVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPT 356 (416)
T ss_dssp CCTTEEEESSCCH---HHHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCC
T ss_pred CCCCEEEeccCCh---HHHhccCCEEEe----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCC
Confidence 4568999999975 456799999996 334579999999999999876643 33344444444332 27
Q ss_pred HHHHHHHHHHHHhcC
Q 027511 100 PGDMVLAIRKAISLL 114 (222)
Q Consensus 100 ~~~la~~i~~ll~~~ 114 (222)
+++++++|.++ +++
T Consensus 357 ~~~l~~~i~~l-~~~ 370 (416)
T 1rrv_A 357 FESLSAALTTV-LAP 370 (416)
T ss_dssp HHHHHHHHHHH-TSH
T ss_pred HHHHHHHHHHh-hCH
Confidence 89999999999 764
No 52
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=97.91 E-value=8.8e-06 Score=75.57 Aligned_cols=142 Identities=14% Similarity=0.115 Sum_probs=97.8
Q ss_pred ceEEEEEcCCccH----HH----HHHHHHHc----CCCC--cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHHH
Q 027511 4 KVRFIVGGDGPKR----VR----LEEMREKH----SLQD--RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~g~~~----~~----l~~~~~~~----~l~~--~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~il 67 (222)
+++|+++|.+... +. +.++++.+ ..++ +|.|+...+-+--..++.+||++++||+ .|++|+.=+
T Consensus 589 p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~M 668 (824)
T 2gj4_A 589 PRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 668 (824)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHH
T ss_pred CEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHH
Confidence 6799999976532 12 33444433 2245 7999998888888889999999999999 999999999
Q ss_pred HHHHhCCcEEEeCCCCcccccc--CCceEEeCC-CHHHHHHHHH-------HHHhcCCCCCHHHHHHHHHhcCCHHHHHH
Q 027511 68 EAASCGLLTVSTRVGGVPEVLP--DDMVVLAEP-DPGDMVLAIR-------KAISLLPKIDPQVMHERMKKLYNWHDVAK 137 (222)
Q Consensus 68 EAma~G~PvVa~~~gg~~e~i~--~~~~g~~~~-~~~~la~~i~-------~ll~~~~~~~~~~~~~~~~~~fs~~~~~~ 137 (222)
=||..|.+.|++--|...|+.. ...+||..+ .++++ ..+. .+.+... ....-...-+...|+|..- .
T Consensus 669 KamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~~~-~l~~v~d~i~~g~fs~~~~-~ 745 (824)
T 2gj4_A 669 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDRIP-ELRQIIEQLSSGFFSPKQP-D 745 (824)
T ss_dssp HHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHHCH-HHHHHHHHHHHTTTCTTST-T
T ss_pred HHHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcCCH-HHHHHHHHHHhCCCCCCCh-H
Confidence 9999999999998898888764 345567766 45555 4331 1111111 0111111233467998776 7
Q ss_pred HHHHHHHHHhc
Q 027511 138 RTEIVYDRALE 148 (222)
Q Consensus 138 ~~~~~~~~~~~ 148 (222)
++..+|++++.
T Consensus 746 ~y~~ly~~l~~ 756 (824)
T 2gj4_A 746 LFKDIVNMLMH 756 (824)
T ss_dssp TTHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 78888888864
No 53
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=97.86 E-value=1.1e-05 Score=69.40 Aligned_cols=110 Identities=13% Similarity=0.028 Sum_probs=69.0
Q ss_pred CCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCc----cccccCCceEEe-C---CC
Q 027511 28 LQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGV----PEVLPDDMVVLA-E---PD 99 (222)
Q Consensus 28 l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~----~e~i~~~~~g~~-~---~~ 99 (222)
.+++|.+.+++++ ..++..+|++|.-+ -..++.||+++|+|+|....++- .+.+...+.+.. . .+
T Consensus 266 ~~~~v~~~~~~~~---~~ll~~~d~~v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~ 338 (404)
T 3h4t_A 266 EGDDCLVVGEVNH---QVLFGRVAAVVHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPT 338 (404)
T ss_dssp CCTTEEEESSCCH---HHHGGGSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCC
T ss_pred CCCCEEEecCCCH---HHHHhhCcEEEECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCC
Confidence 3568999999875 45778999999433 34788999999999998765432 122333333332 2 27
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Q 027511 100 PGDMVLAIRKAISLLPKIDPQVMHERMKKLYNWHDVAKRTEIVYDRALEC 149 (222)
Q Consensus 100 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~~~~~ 149 (222)
++++.+++.++++ ++ ...+ ...+.+.+.- .-.++..+.+++.+..
T Consensus 339 ~~~l~~ai~~ll~-~~--~~~~-~~~~~~~~~~-~~~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 339 VESLSAALATALT-PG--IRAR-AAAVAGTIRT-DGTTVAAKLLLEAISR 383 (404)
T ss_dssp HHHHHHHHHHHTS-HH--HHHH-HHHHHTTCCC-CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC-HH--HHHH-HHHHHHHHhh-hHHHHHHHHHHHHHhh
Confidence 8999999999997 43 2222 2233333332 3444444555555443
No 54
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=96.96 E-value=0.0027 Score=52.12 Aligned_cols=63 Identities=11% Similarity=0.122 Sum_probs=48.2
Q ss_pred EEEcCC-ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 8 IVGGDG-PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 8 vi~G~g-~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
++.|.+ +..+++++.+++. .++.+.+++ +++..+|+.||+.|.+ .|.++.|++++|+|.|.-.
T Consensus 188 vv~G~~~~~~~~l~~~~~~~---~~v~v~~~~--~~m~~~m~~aDlvI~~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 188 IATSSSNPNLKKLQKFAKLH---NNIRLFIDH--ENIAKLMNESNKLIIS-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp EEECTTCTTHHHHHHHHHTC---SSEEEEESC--SCHHHHHHTEEEEEEE-----SSHHHHHHHHTTCCEEEEC
T ss_pred EEECCCchHHHHHHHHHhhC---CCEEEEeCH--HHHHHHHHHCCEEEEC-----CcHHHHHHHHcCCCEEEEe
Confidence 445644 3456666666543 379999986 7899999999999973 3579999999999999764
No 55
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=96.40 E-value=0.0095 Score=52.08 Aligned_cols=78 Identities=14% Similarity=0.111 Sum_probs=55.1
Q ss_pred CcEEEeCCCChhHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCC-ceEEeCC----
Q 027511 30 DRVEMLGAVPHAQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDD-MVVLAEP---- 98 (222)
Q Consensus 30 ~~V~~~g~v~~~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~-~~g~~~~---- 98 (222)
+++...+++|+. .+|. ++|+|| +-+-.+++.||+++|+|+|+....+ ....+.+. +.|+..+
T Consensus 325 ~~~~v~~w~pq~---~vL~h~~~~~fv----th~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~ 397 (456)
T 2c1x_A 325 GYGMVVPWAPQA---EVLAHEAVGAFV----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVF 397 (456)
T ss_dssp TTEEEESCCCHH---HHHTSTTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSC
T ss_pred CceEEecCCCHH---HHhcCCcCCEEE----ecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCc
Confidence 467888888763 5687 677887 4555789999999999999876532 22233333 4443322
Q ss_pred CHHHHHHHHHHHHhcC
Q 027511 99 DPGDMVLAIRKAISLL 114 (222)
Q Consensus 99 ~~~~la~~i~~ll~~~ 114 (222)
+.+++.++|.++++++
T Consensus 398 ~~~~l~~~i~~ll~~~ 413 (456)
T 2c1x_A 398 TKSGLMSCFDQILSQE 413 (456)
T ss_dssp CHHHHHHHHHHHHHSH
T ss_pred CHHHHHHHHHHHHCCC
Confidence 6899999999999874
No 56
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=96.25 E-value=0.013 Score=51.47 Aligned_cols=78 Identities=17% Similarity=0.072 Sum_probs=54.5
Q ss_pred CcEEEeCCCChhHHHHHHHhccE--EEEcCCCccccHHHHHHHHhCCcEEEeCCCC----cccccc-CCceEEeCC---C
Q 027511 30 DRVEMLGAVPHAQVRSVLISGHI--FLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLP-DDMVVLAEP---D 99 (222)
Q Consensus 30 ~~V~~~g~v~~~~~~~ll~~adv--~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~-~~~~g~~~~---~ 99 (222)
+++.+.+++|+. .+|..+++ || +-+-.+++.||+++|+|+|+....+ ....+. ..+.|+... +
T Consensus 353 ~~~~v~~~~pq~---~~L~h~~~~~~v----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~ 425 (482)
T 2pq6_A 353 DRGLIASWCPQD---KVLNHPSIGGFL----THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVK 425 (482)
T ss_dssp TTEEEESCCCHH---HHHTSTTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCC
T ss_pred CCEEEEeecCHH---HHhcCCCCCEEE----ecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCC
Confidence 578888888765 47866555 66 4455689999999999999876542 222232 334444332 7
Q ss_pred HHHHHHHHHHHHhcC
Q 027511 100 PGDMVLAIRKAISLL 114 (222)
Q Consensus 100 ~~~la~~i~~ll~~~ 114 (222)
.+++.++|.++++++
T Consensus 426 ~~~l~~~i~~ll~~~ 440 (482)
T 2pq6_A 426 REELAKLINEVIAGD 440 (482)
T ss_dssp HHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHcCC
Confidence 899999999999864
No 57
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.21 E-value=0.012 Score=48.95 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=51.1
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCC---CCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSL---QDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l---~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
++++++.|...+.+..+++.+..+- ...+.+.|..+-.++..+++.||++|.... | .+..|+++|+|+|+--
T Consensus 213 ~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Ds----g-~~HlAaa~g~P~v~lf 287 (348)
T 1psw_A 213 GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS----G-LMHVAAALNRPLVALY 287 (348)
T ss_dssp TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS----H-HHHHHHHTTCCEEEEE
T ss_pred CCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCC----H-HHHHHHHcCCCEEEEE
Confidence 5788888876666555555543321 123467888889999999999999997642 3 3444999999999743
No 58
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=96.11 E-value=0.019 Score=50.30 Aligned_cols=79 Identities=13% Similarity=0.071 Sum_probs=54.4
Q ss_pred CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccccCC-ceEEeC----CCH
Q 027511 30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVLPDD-MVVLAE----PDP 100 (222)
Q Consensus 30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i~~~-~~g~~~----~~~ 100 (222)
+|+...+|+|+ ..+|..+++.++- +-+-.++++||+++|+|.|+....+ ....+.+. +.|+.. -+.
T Consensus 327 ~~~~vv~w~Pq---~~vL~h~~v~~fv--tH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~ 401 (454)
T 3hbf_A 327 TKGKIVAWAPQ---VEILKHSSVGVFL--THSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTK 401 (454)
T ss_dssp TTEEEESSCCH---HHHHHSTTEEEEE--ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCH
T ss_pred CceEEEeeCCH---HHHHhhcCcCeEE--ecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCH
Confidence 47888899886 3778888843332 3334578999999999999876532 22234442 444332 267
Q ss_pred HHHHHHHHHHHhc
Q 027511 101 GDMVLAIRKAISL 113 (222)
Q Consensus 101 ~~la~~i~~ll~~ 113 (222)
+++.++|.+++++
T Consensus 402 ~~l~~av~~ll~~ 414 (454)
T 3hbf_A 402 ESIKKALELTMSS 414 (454)
T ss_dssp HHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHCC
Confidence 9999999999975
No 59
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=95.63 E-value=0.041 Score=46.22 Aligned_cols=77 Identities=9% Similarity=0.040 Sum_probs=55.7
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG 83 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg 83 (222)
+.++++.|...+++..++..+..+. ..+.+.|..+-.++..+++.||++|..-. |..-+ |.++|+|+|+--...
T Consensus 217 g~~vvl~g~~~e~~~~~~i~~~~~~-~~~~l~g~~sl~e~~ali~~a~~~i~~Ds----G~~Hl-Aaa~g~P~v~lfg~t 290 (349)
T 3tov_A 217 GYKTVFFGGPMDLEMVQPVVEQMET-KPIVATGKFQLGPLAAAMNRCNLLITNDS----GPMHV-GISQGVPIVALYGPS 290 (349)
T ss_dssp TCEEEECCCTTTHHHHHHHHHTCSS-CCEECTTCCCHHHHHHHHHTCSEEEEESS----HHHHH-HHTTTCCEEEECSSC
T ss_pred CCeEEEEeCcchHHHHHHHHHhccc-ccEEeeCCCCHHHHHHHHHhCCEEEECCC----CHHHH-HHhcCCCEEEEECCC
Confidence 4677888877677777777666542 34667888899999999999999996532 44444 899999999864433
Q ss_pred ccc
Q 027511 84 VPE 86 (222)
Q Consensus 84 ~~e 86 (222)
.+.
T Consensus 291 ~p~ 293 (349)
T 3tov_A 291 NPF 293 (349)
T ss_dssp CHH
T ss_pred Ccc
Confidence 333
No 60
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.16 E-value=0.086 Score=43.39 Aligned_cols=102 Identities=15% Similarity=0.167 Sum_probs=62.2
Q ss_pred ceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511 4 KVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG 82 (222)
Q Consensus 4 ~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g 82 (222)
++++++.++++ +++..++..+.. + ++.+.|..+-.++..+++.||++|..-. |..=+ |.|.|+|+|+--..
T Consensus 210 ~~~vvl~~g~~~e~~~~~~i~~~~--~-~~~l~g~~sl~el~ali~~a~l~I~~DS----G~~Hl-Aaa~g~P~v~lfg~ 281 (326)
T 2gt1_A 210 GIRIKLPWGAPHEEERAKRLAEGF--A-YVEVLPKMSLEGVARVLAGAKFVVSVDT----GLSHL-TAALDRPNITVYGP 281 (326)
T ss_dssp CCEEEECCSSHHHHHHHHHHHTTC--T-TEEECCCCCHHHHHHHHHTCSEEEEESS----HHHHH-HHHTTCCEEEEESS
T ss_pred CCcEEEecCCHHHHHHHHHHHhhC--C-cccccCCCCHHHHHHHHHhCCEEEecCC----cHHHH-HHHcCCCEEEEECC
Confidence 57788873344 333444444433 2 4677898899999999999999996532 44444 77899999974322
Q ss_pred Cccccc-c--CCceEE-------eCCCHHHHHHHHHHHHhc
Q 027511 83 GVPEVL-P--DDMVVL-------AEPDPGDMVLAIRKAISL 113 (222)
Q Consensus 83 g~~e~i-~--~~~~g~-------~~~~~~~la~~i~~ll~~ 113 (222)
..+... + +....+ ..-+++++.+++.++++.
T Consensus 282 t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 282 TDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp SCHHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred CChhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 211111 1 111111 122678888888877754
No 61
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=95.09 E-value=0.048 Score=50.92 Aligned_cols=102 Identities=15% Similarity=0.102 Sum_probs=75.6
Q ss_pred CceEEEEEcCCc----cHHHHHHHHHHc--------CCCC--cEEEeCCCChhHHHHHHHhccEEEEcCC--CccccHHH
Q 027511 3 VKVRFIVGGDGP----KRVRLEEMREKH--------SLQD--RVEMLGAVPHAQVRSVLISGHIFLNSSL--TEAFCIAI 66 (222)
Q Consensus 3 p~~~lvi~G~g~----~~~~l~~~~~~~--------~l~~--~V~~~g~v~~~~~~~ll~~adv~v~~s~--~E~~g~~i 66 (222)
....++++|... ..+.+.+++... .+.+ +|.|+....-+-...++.+||+..+.|. .|+.|+.=
T Consensus 647 ~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsn 726 (879)
T 1ygp_A 647 PRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSN 726 (879)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHH
T ss_pred CCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchh
Confidence 357888998432 123333333322 2344 7999999988888899999999999888 89999999
Q ss_pred HHHHHhCCcEEEeCCCCccccccC--CceEEeCC-CHHHHH
Q 027511 67 LEAASCGLLTVSTRVGGVPEVLPD--DMVVLAEP-DPGDMV 104 (222)
Q Consensus 67 lEAma~G~PvVa~~~gg~~e~i~~--~~~g~~~~-~~~~la 104 (222)
+=+|.-|.+.++|--|...|+..+ ..++|..+ +.+++.
T Consensus 727 MKfalNGaLtlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~ 767 (879)
T 1ygp_A 727 MKFVMNGGLIIGTVDGANVEITREIGEDNVFLFGNLSENVE 767 (879)
T ss_dssp HHHHTTTCEEEEESCTHHHHHHHHHCGGGSEEESCCHHHHH
T ss_pred hHHHHcCCeeeecccchhHHHHHHcCcccEEEccCCHHHHH
Confidence 999999999999999999999865 34556555 444433
No 62
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=94.61 E-value=0.12 Score=45.01 Aligned_cols=76 Identities=14% Similarity=0.087 Sum_probs=52.2
Q ss_pred CcEEEeCCCChhHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----cccc-ccCCceEEeC-----
Q 027511 30 DRVEMLGAVPHAQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEV-LPDDMVVLAE----- 97 (222)
Q Consensus 30 ~~V~~~g~v~~~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~-i~~~~~g~~~----- 97 (222)
+++...+++|+. .+|. ++++|| +-+-.+++.||+++|+|+|+....+ .... +...+.|+..
T Consensus 332 ~~~~v~~w~pq~---~vL~h~~~~~fv----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~ 404 (463)
T 2acv_A 332 GKGMICGWAPQV---EVLAHKAIGGFV----SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR 404 (463)
T ss_dssp CSEEEESSCCHH---HHHHSTTEEEEE----ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC
T ss_pred CCEEEEccCCHH---HHhCCCccCeEE----ecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC
Confidence 467777787754 4565 577777 4555689999999999999876532 2223 3344444322
Q ss_pred -----CCHHHHHHHHHHHHh
Q 027511 98 -----PDPGDMVLAIRKAIS 112 (222)
Q Consensus 98 -----~~~~~la~~i~~ll~ 112 (222)
-+.+++.++|.++++
T Consensus 405 ~~~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 405 KGSDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp TTCCCCCHHHHHHHHHHHTC
T ss_pred CCCccccHHHHHHHHHHHHh
Confidence 267999999999995
No 63
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=93.69 E-value=0.024 Score=44.88 Aligned_cols=74 Identities=11% Similarity=0.056 Sum_probs=49.2
Q ss_pred cEEEeCCCChhHHHHHHH-hccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCc--------cccccCCceEEeCCCHH
Q 027511 31 RVEMLGAVPHAQVRSVLI-SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGV--------PEVLPDDMVVLAEPDPG 101 (222)
Q Consensus 31 ~V~~~g~v~~~~~~~ll~-~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~--------~e~i~~~~~g~~~~~~~ 101 (222)
++...+++ +++..+|. .||++| +-+-..++.|++++|+|.|.-..... .+.+.+.+.++.. +++
T Consensus 115 ~v~v~~f~--~~m~~~l~~~AdlvI----shaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~-~~~ 187 (224)
T 2jzc_A 115 KVIGFDFS--TKMQSIIRDYSDLVI----SHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC-APT 187 (224)
T ss_dssp EEEECCSS--SSHHHHHHHHCSCEE----ESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE-CSC
T ss_pred eEEEeecc--chHHHHHHhcCCEEE----ECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc-CHH
Confidence 45666776 78999999 999999 45567899999999999997654321 1112111112222 566
Q ss_pred HHHHHHHHHH
Q 027511 102 DMVLAIRKAI 111 (222)
Q Consensus 102 ~la~~i~~ll 111 (222)
.+.++|.++-
T Consensus 188 ~L~~~i~~l~ 197 (224)
T 2jzc_A 188 ETGLIAGLRA 197 (224)
T ss_dssp TTTHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777777763
No 64
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=93.57 E-value=0.26 Score=43.17 Aligned_cols=77 Identities=14% Similarity=0.007 Sum_probs=51.0
Q ss_pred EEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC----ccccc-cCCceEEeC-------CC
Q 027511 32 VEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG----VPEVL-PDDMVVLAE-------PD 99 (222)
Q Consensus 32 V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg----~~e~i-~~~~~g~~~-------~~ 99 (222)
+...+++|+. .+|..+++.++- +-+-.++++||+++|+|+|+....+ ....+ ..-+.|+.. -+
T Consensus 341 ~~v~~w~Pq~---~vL~h~~v~~fv--tHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~ 415 (480)
T 2vch_A 341 FVIPFWAPQA---QVLAHPSTGGFL--THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR 415 (480)
T ss_dssp EEEESCCCHH---HHHHSTTEEEEE--ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred EEEeCccCHH---HHhCCCCcCeEE--ecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccC
Confidence 3455698764 788888853222 3344578999999999999876532 22232 343444321 26
Q ss_pred HHHHHHHHHHHHhc
Q 027511 100 PGDMVLAIRKAISL 113 (222)
Q Consensus 100 ~~~la~~i~~ll~~ 113 (222)
.+++.++|.+++++
T Consensus 416 ~~~l~~av~~vl~~ 429 (480)
T 2vch_A 416 REEVARVVKGLMEG 429 (480)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcC
Confidence 79999999999974
No 65
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=90.83 E-value=3.7 Score=30.14 Aligned_cols=106 Identities=12% Similarity=0.070 Sum_probs=55.7
Q ss_pred eEEEEEcC---Cc-cHHHHHHHHHHcCCCCcEEEeCCCChh--------------H----HHHHHHhccEEEEcCCCccc
Q 027511 5 VRFIVGGD---GP-KRVRLEEMREKHSLQDRVEMLGAVPHA--------------Q----VRSVLISGHIFLNSSLTEAF 62 (222)
Q Consensus 5 ~~lvi~G~---g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~--------------~----~~~ll~~adv~v~~s~~E~~ 62 (222)
.++.++|. +. ....++++++.+.-.+.| +..++..+ + =.+.+++||++|.--. +.-
T Consensus 3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G~V-l~~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~-~~d 80 (152)
T 4fyk_A 3 RSVYFCGSIRGGREDQALYARIVSRLRRYGKV-LTEHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT-QPS 80 (152)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHHHHTTTSEE-CCCC-------------CCCHHHHHHHHHHHHHHCSEEEEECS-SCC
T ss_pred ceEEEECCCCCcHHHHHHHHHHHHHHHHcCcc-cccccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC-CCC
Confidence 57899992 22 335556666666444433 33333221 1 1356788999876322 444
Q ss_pred cHHHHH---HHHhCCcEEEeCCCCcccccc-------C-CceE-EeCCCHHHHHHHHHHHHhc
Q 027511 63 CIAILE---AASCGLLTVSTRVGGVPEVLP-------D-DMVV-LAEPDPGDMVLAIRKAISL 113 (222)
Q Consensus 63 g~~ilE---Ama~G~PvVa~~~gg~~e~i~-------~-~~~g-~~~~~~~~la~~i~~ll~~ 113 (222)
..+.+| |.+.|+||++-........+. + ...- ....+ +++.+.|.+.++.
T Consensus 81 ~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~-~el~~il~~f~~~ 142 (152)
T 4fyk_A 81 LGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE-GEVETMLDRYFEA 142 (152)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT-TCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH-HHHHHHHHHHHHh
Confidence 445555 678999999832221111121 1 1112 23334 7888888777754
No 66
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=90.20 E-value=0.71 Score=37.42 Aligned_cols=78 Identities=15% Similarity=0.182 Sum_probs=56.3
Q ss_pred ceEEEEEc-CCccHHHHHHHHHHcCCCCcEEEeCCCC-----------------------hhHHHHHHHhccEEEEcCCC
Q 027511 4 KVRFIVGG-DGPKRVRLEEMREKHSLQDRVEMLGAVP-----------------------HAQVRSVLISGHIFLNSSLT 59 (222)
Q Consensus 4 ~~~lvi~G-~g~~~~~l~~~~~~~~l~~~V~~~g~v~-----------------------~~~~~~ll~~adv~v~~s~~ 59 (222)
.+++.|+| .|..-..+.+.+.+. +.+.+.+-+. .+++.+++..+|+.|..+..
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~---~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p 83 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA---PDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLP 83 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC---TTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC---CCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCH
Confidence 47899999 888888887776653 2344443221 25678888999999987776
Q ss_pred ccccHHHHHHHHhCCcEEEeCCCCc
Q 027511 60 EAFCIAILEAASCGLLTVSTRVGGV 84 (222)
Q Consensus 60 E~~g~~ilEAma~G~PvVa~~~gg~ 84 (222)
+..--.+..++..|+|+|....|-.
T Consensus 84 ~a~~~~~~~al~~G~~vVigTTG~s 108 (272)
T 4f3y_A 84 EGTLVHLDAALRHDVKLVIGTTGFS 108 (272)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCC
Confidence 6555566788999999998776643
No 67
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=87.64 E-value=0.86 Score=37.28 Aligned_cols=77 Identities=19% Similarity=0.173 Sum_probs=54.7
Q ss_pred ceEEEEEc-CCccHHHHHHHHHHcCCCCcEEEeCCCCh------------------------hHHHHHHHhccEEEEcCC
Q 027511 4 KVRFIVGG-DGPKRVRLEEMREKHSLQDRVEMLGAVPH------------------------AQVRSVLISGHIFLNSSL 58 (222)
Q Consensus 4 ~~~lvi~G-~g~~~~~l~~~~~~~~l~~~V~~~g~v~~------------------------~~~~~ll~~adv~v~~s~ 58 (222)
.+|+.|+| .|..-..+.+.+.+. +.+.+.|-+.. +++.+++..+|+.|.-+.
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~---~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~ 97 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR---KDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ 97 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC---SSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC---CCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC
Confidence 47899999 888887777776643 23444443321 367888889999997776
Q ss_pred CccccHHHHHHHHhCCcEEEeCCCC
Q 027511 59 TEAFCIAILEAASCGLLTVSTRVGG 83 (222)
Q Consensus 59 ~E~~g~~ilEAma~G~PvVa~~~gg 83 (222)
.+..--.+..++..|+|+|....|-
T Consensus 98 p~a~~~~~~~~l~~Gv~vViGTTG~ 122 (288)
T 3ijp_A 98 PQASVLYANYAAQKSLIHIIGTTGF 122 (288)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 5554445567889999999877664
No 68
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=86.96 E-value=5.9 Score=33.61 Aligned_cols=83 Identities=14% Similarity=0.167 Sum_probs=57.5
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC--------------------------------------hhHHH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP--------------------------------------HAQVR 44 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~--------------------------------------~~~~~ 44 (222)
|..+++|+|.|..-....+.+..+|. +|.....-+ .+.+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 56789999999877777777777765 354433211 23567
Q ss_pred HHHHhccEEEEcCCCc------cccHHHHHHHHhCCcEE--EeCCCCcccc
Q 027511 45 SVLISGHIFLNSSLTE------AFCIAILEAASCGLLTV--STRVGGVPEV 87 (222)
Q Consensus 45 ~ll~~adv~v~~s~~E------~~g~~ilEAma~G~PvV--a~~~gg~~e~ 87 (222)
+.+..+|+++.+.... -+.-..++.|.-|.-+| +.+.||..|.
T Consensus 261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~ 311 (381)
T 3p2y_A 261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCEL 311 (381)
T ss_dssp HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcccc
Confidence 7889999999764321 24567888888888777 5667887774
No 69
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=82.84 E-value=4.6 Score=34.62 Aligned_cols=84 Identities=17% Similarity=0.175 Sum_probs=56.6
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC-----------------------------------C-------h
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV-----------------------------------P-------H 40 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v-----------------------------------~-------~ 40 (222)
++.+++|+|.|..-....+.+..+|. +|.....- + .
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA--VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 46788999988777666666666654 23332111 1 1
Q ss_pred hHHHHHHHhccEEEEcCCCc------cccHHHHHHHHhCCcEE--EeCCCCccccc
Q 027511 41 AQVRSVLISGHIFLNSSLTE------AFCIAILEAASCGLLTV--STRVGGVPEVL 88 (222)
Q Consensus 41 ~~~~~ll~~adv~v~~s~~E------~~g~~ilEAma~G~PvV--a~~~gg~~e~i 88 (222)
+.+.+.+..+|+++.+.... -+.-..++.|.-|.-+| +.+.||..|..
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTC
T ss_pred hHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCcccc
Confidence 35778889999999874422 25668889999898888 45578877764
No 70
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=81.73 E-value=2.8 Score=32.11 Aligned_cols=70 Identities=16% Similarity=0.103 Sum_probs=42.7
Q ss_pred hHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCC-ccccc----cCC--------ceEEeCCCHHHHHHHH
Q 027511 41 AQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGG-VPEVL----PDD--------MVVLAEPDPGDMVLAI 107 (222)
Q Consensus 41 ~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg-~~e~i----~~~--------~~g~~~~~~~~la~~i 107 (222)
+...-+...+|.+|...-.-+-=..+.||+..|+||+.-+..| ..+.+ .++ ......+|++++.+.|
T Consensus 110 ~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~l 189 (195)
T 1rcu_A 110 MRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQII 189 (195)
T ss_dssp HHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHHHHHH
Confidence 3445556678998764432122245688899999999987544 22222 222 1235667899988887
Q ss_pred HHH
Q 027511 108 RKA 110 (222)
Q Consensus 108 ~~l 110 (222)
.++
T Consensus 190 ~~~ 192 (195)
T 1rcu_A 190 EQI 192 (195)
T ss_dssp HTC
T ss_pred HHH
Confidence 643
No 71
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=80.35 E-value=14 Score=29.12 Aligned_cols=75 Identities=9% Similarity=0.087 Sum_probs=48.8
Q ss_pred eEEEEEc-CCccHHHHHHHHHHcCCCCcEEEeCCC-ChhHHHHHHH-hccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 5 VRFIVGG-DGPKRVRLEEMREKHSLQDRVEMLGAV-PHAQVRSVLI-SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 5 ~~lvi~G-~g~~~~~l~~~~~~~~l~~~V~~~g~v-~~~~~~~ll~-~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
+++.|+| .|..-..+.+.+.+.. ...+.+.+ ..+++..++. .+|+.|-.+..+..--.+..+...|+|+|....
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~---~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTT 77 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAAD---DLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTT 77 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCT---TCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCC
Confidence 4788999 5888777777765431 12332222 1345666665 789999666666655455567889999998655
Q ss_pred C
Q 027511 82 G 82 (222)
Q Consensus 82 g 82 (222)
|
T Consensus 78 G 78 (245)
T 1p9l_A 78 G 78 (245)
T ss_dssp C
T ss_pred C
Confidence 5
No 72
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=75.55 E-value=3.2 Score=38.07 Aligned_cols=67 Identities=6% Similarity=0.072 Sum_probs=45.4
Q ss_pred hhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCccccc----------cCCceEEeCCCHHHHHHHHHH
Q 027511 40 HAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVL----------PDDMVVLAEPDPGDMVLAIRK 109 (222)
Q Consensus 40 ~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~e~i----------~~~~~g~~~~~~~~la~~i~~ 109 (222)
..++.++|..||++| ++ ++.+++|++..++|||-.... ..+.. .+..-|-...+.+++.++|..
T Consensus 606 ~~di~~ll~~aD~lI----TD-ySSv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~~~i~~ 679 (729)
T 3l7i_A 606 YNDVSELFLISDCLI----TD-YSSVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYMNYMEDLPGPIYTEPYGLAKELKN 679 (729)
T ss_dssp CSCHHHHHHTCSEEE----ES-SCTHHHHHGGGCCCEEEECTT-TTTTTSSCCSBSSCTTSSSSSCEESSHHHHHHHHTT
T ss_pred CcCHHHHHHHhCEEE----ee-chHHHHhHHhhCCCEEEecCC-HHHHhhccCCcccChhHhCCCCeECCHHHHHHHHhh
Confidence 357899999999998 33 455899999999999965221 11111 111223344588999999987
Q ss_pred HHh
Q 027511 110 AIS 112 (222)
Q Consensus 110 ll~ 112 (222)
...
T Consensus 680 ~~~ 682 (729)
T 3l7i_A 680 LDK 682 (729)
T ss_dssp HHH
T ss_pred hhc
Confidence 764
No 73
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=73.35 E-value=23 Score=29.25 Aligned_cols=81 Identities=15% Similarity=0.170 Sum_probs=59.7
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh----------hHHHHHHHhccEEEE-cCC-Ccc---ccHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH----------AQVRSVLISGHIFLN-SSL-TEA---FCIAILE 68 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~----------~~~~~ll~~adv~v~-~s~-~E~---~g~~ilE 68 (222)
+..+-|+|-|.--..+.+.++.+|. +|......+. .++.+++++||+++. .+. .|+ ++-..+.
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~fg~--~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~ 218 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAFGM--KVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERIS 218 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHH
T ss_pred CcEEEEECcchHHHHHHHhhcccCc--eeeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHh
Confidence 3468899999888889898888876 4665554332 246789999999653 333 233 6788899
Q ss_pred HHHhCCcEEEeCCCCccc
Q 027511 69 AASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 69 Ama~G~PvVa~~~gg~~e 86 (222)
.|--|.-+|-+..|++.+
T Consensus 219 ~mk~~a~lIN~aRG~iVd 236 (334)
T 3kb6_A 219 LMKDGVYLINTARGKVVD 236 (334)
T ss_dssp HSCTTEEEEECSCGGGBC
T ss_pred hcCCCeEEEecCcccccc
Confidence 999999999888887654
No 74
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=73.21 E-value=4.6 Score=28.03 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=46.4
Q ss_pred CceEEEEEcCC-ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 3 VKVRFIVGGDG-PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 3 p~~~lvi~G~g-~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
.+..|+|.|.= ..+++++++++++|- .+.+.|+. ..|.+|.....|.-|.++-.|...|+|||.=+
T Consensus 12 ~G~~~ViTG~l~~~R~e~k~~ie~~Gg----kv~~sVsk--------kT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~ 78 (113)
T 2cok_A 12 SNMKILTLGKLSRNKDEVKAMIEKLGG----KLTGTANK--------ASLCISTKKEVEKMNKKMEEVKEANIRVVSED 78 (113)
T ss_dssp SSCEEEECSCCSSCHHHHHHHHHHTTC----EEESCSTT--------CSEEECCHHHHHHCCHHHHHHHHTTCCEECTH
T ss_pred CCCEEEEEecCCCCHHHHHHHHHHCCC----EEcCcccc--------CccEEEECCCCCCCChHHHHHHHCCCcEEeHH
Confidence 35678888843 268889999988874 35677752 34555555223456889999999999999644
No 75
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=72.81 E-value=2.4 Score=28.98 Aligned_cols=51 Identities=10% Similarity=0.122 Sum_probs=33.2
Q ss_pred EEEEcCCccH----HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCc
Q 027511 7 FIVGGDGPKR----VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60 (222)
Q Consensus 7 lvi~G~g~~~----~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E 60 (222)
++++|.|-.. ..+++.+++.|++-.|.-.+. .++...+..+|+++.++...
T Consensus 7 ll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~~---~~~~~~~~~~Dvil~~pqv~ 61 (106)
T 1e2b_A 7 YLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPE---TLAGEKGQNADVVLLGPQIA 61 (106)
T ss_dssp EEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECS---SSTTHHHHHCSEEEECTTSG
T ss_pred EEECCCchhHHHHHHHHHHHHHHCCCCeEEEEecH---HHHHhhccCCCEEEEccchh
Confidence 4455655432 577778888898754444443 45556678899999877643
No 76
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=70.25 E-value=17 Score=26.47 Aligned_cols=93 Identities=14% Similarity=0.089 Sum_probs=60.3
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----c-EEEEcCCCccccHHHHHHH----HhCCcEEE---eCCCCc
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----H-IFLNSSLTEAFCIAILEAA----SCGLLTVS---TRVGGV 84 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----d-v~v~~s~~E~~g~~ilEAm----a~G~PvVa---~~~gg~ 84 (222)
..+++.+.++|+ .+.|.-+=...++-+.+..+ | +.++|.-+.+.++++..|+ +.++|+|= ||+- -
T Consensus 36 ~~l~~~a~~~g~--~v~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~l~~~~~P~VEVHiSNi~-a 112 (151)
T 3u80_A 36 KLCAEWGKDLGL--EVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEVHISNPS-A 112 (151)
T ss_dssp HHHHHHHHHTTE--EEEEEECSCHHHHHHHHHHHHHHTCCEEEECTTCCSCCHHHHHHHHHHHHTTCCEEEEESSCCC--
T ss_pred HHHHHHHHHcCC--EEEEEecCCHHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHHHhhcCCCEEEEEcCCcc-c
Confidence 455556666665 37776665566777776654 3 6789999999999999994 45999993 3332 2
Q ss_pred cc------cccCCceEEeCC-CHHHHHHHHHHHHh
Q 027511 85 PE------VLPDDMVVLAEP-DPGDMVLAIRKAIS 112 (222)
Q Consensus 85 ~e------~i~~~~~g~~~~-~~~~la~~i~~ll~ 112 (222)
+| ++.+-..|.... ..+...-++..+++
T Consensus 113 RE~FRh~S~~s~~a~G~I~G~G~~gY~lAl~~~~~ 147 (151)
T 3u80_A 113 RDEFRKRSVISPVATGTITGMGFYGYKLALDAVAH 147 (151)
T ss_dssp --------CSCCCCSEEEESSTTHHHHHHHHHHHH
T ss_pred ccchhhcccccccceEEEEecChHHHHHHHHHHHH
Confidence 33 444445566555 56666666666554
No 77
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=70.05 E-value=12 Score=31.81 Aligned_cols=74 Identities=12% Similarity=0.141 Sum_probs=52.6
Q ss_pred CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC----C-----------------------hhHHHHHHHhccEEE
Q 027511 2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV----P-----------------------HAQVRSVLISGHIFL 54 (222)
Q Consensus 2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v----~-----------------------~~~~~~ll~~adv~v 54 (222)
.++.++++.|.|..-..+-+++..+|. .+|.+...- . ..++.+.+..+|+++
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~-~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlI 268 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGV-KNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFI 268 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCC-CeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEE
Confidence 468899999999887777777777775 456655432 1 234788899999999
Q ss_pred EcCCCccccHHHHHHHHhCCcEE
Q 027511 55 NSSLTEAFCIAILEAASCGLLTV 77 (222)
Q Consensus 55 ~~s~~E~~g~~ilEAma~G~PvV 77 (222)
-.|..-.+.--+++.|+- .|+|
T Consensus 269 G~Sap~l~t~emVk~Ma~-~pII 290 (388)
T 1vl6_A 269 GVSRGNILKPEWIKKMSR-KPVI 290 (388)
T ss_dssp ECSCSSCSCHHHHTTSCS-SCEE
T ss_pred EeCCCCccCHHHHHhcCC-CCEE
Confidence 888755566667777763 4555
No 78
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=68.96 E-value=17 Score=29.24 Aligned_cols=39 Identities=15% Similarity=0.042 Sum_probs=28.1
Q ss_pred hHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++...|+.+.++-...-.-.+.+|+..|++|++-
T Consensus 58 ~~~~~ll~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~E 96 (308)
T 3uuw_A 58 DSIESLAKKCDCIFLHSSTETHYEIIKILLNLGVHVYVD 96 (308)
T ss_dssp SCHHHHHTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHHhcCCEEEEeCCcHhHHHHHHHHHHCCCcEEEc
Confidence 455666778899777666555455667899999998864
No 79
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=68.52 E-value=30 Score=28.17 Aligned_cols=68 Identities=15% Similarity=0.104 Sum_probs=40.0
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
|+++++-+-+ ...+..++.++++++. +.. .+++.+++.. .|+++.++-...-.-.+.+|+..|++|++
T Consensus 26 ~~~~l~av~d-~~~~~~~~~~~~~g~~--~~~-----~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~ 95 (344)
T 3mz0_A 26 SGAEIVAVTD-VNQEAAQKVVEQYQLN--ATV-----YPNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFC 95 (344)
T ss_dssp SSEEEEEEEC-SSHHHHHHHHHHTTCC--CEE-----ESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEEEc-CCHHHHHHHHHHhCCC--Cee-----eCCHHHHhcCCCCCEEEECCCchhHHHHHHHHHHCCCcEEE
Confidence 4555443332 2334455555655531 111 2456677776 78877666555445566789999999986
No 80
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=65.84 E-value=41 Score=27.60 Aligned_cols=39 Identities=15% Similarity=-0.010 Sum_probs=27.3
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++. ..|+++.++-.....-.+.+|+..|++|++-
T Consensus 61 ~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~V~~E 101 (362)
T 1ydw_A 61 GSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLE 101 (362)
T ss_dssp SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEEC
T ss_pred CCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCCeEEEe
Confidence 35667776 4788777666554455666899999999873
No 81
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=65.72 E-value=29 Score=23.66 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=43.6
Q ss_pred CceEEEEEcCC--ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 3 VKVRFIVGGDG--PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 3 p~~~lvi~G~g--~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.+..|+|.|.- -.+++++++++.+|- .+.+.|+. ..|++|.... ..+.++-.|...|+|||.
T Consensus 34 ~G~~~v~TG~l~~~~R~e~~~~i~~~Gg----~v~~sVSk--------kTd~LV~G~~--~g~sK~~kA~~lgI~Ii~ 97 (109)
T 2k6g_A 34 EGLIFVITGVLESIERDEAKSLIERYGG----KVTGNVSK--------KTNYLVMGRD--SGQSKSDKAAALGTKIID 97 (109)
T ss_dssp TTCEEEEESBCSSCCHHHHHHHHHHTTC----EEESSCCT--------TCCEEEECBC--CCHHHHHHHHHHTCEEEC
T ss_pred CCCEEEEeeeCCCCCHHHHHHHHHHcCC----EeeCcccC--------CceEEEECCC--CChHHHHHHHHcCCeEEe
Confidence 35678888854 358888888888773 35677752 4577776532 223788899999999985
No 82
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=65.63 E-value=15 Score=27.27 Aligned_cols=83 Identities=16% Similarity=0.140 Sum_probs=59.4
Q ss_pred cEEEeCCCChhHHHHHHHhcc------EEEEcCCCccccHHHHHHH-HhCCcEEE---eCCCCccc------cccCCceE
Q 027511 31 RVEMLGAVPHAQVRSVLISGH------IFLNSSLTEAFCIAILEAA-SCGLLTVS---TRVGGVPE------VLPDDMVV 94 (222)
Q Consensus 31 ~V~~~g~v~~~~~~~ll~~ad------v~v~~s~~E~~g~~ilEAm-a~G~PvVa---~~~gg~~e------~i~~~~~g 94 (222)
.+.|.-+-...++-+.+..+. +.++|.-+.+.++++..|+ +.++|+|= ||+- -+| ++.+-..|
T Consensus 60 ~v~~~QSN~EGeLId~Ih~A~~~~~dgIIINpgAyTHtSvAlrDAL~~v~~P~VEVHiSNih-aRE~FRh~S~~s~~a~G 138 (167)
T 3kip_A 60 EVLVFQSNTEGFIIDRIHEAKRQGVGFVVINAGAYTHTSVGIRDALLGTAIPFIEVHITNVH-QREPFRHQSYLSDKAVA 138 (167)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTCCEEEEECGGGGGTCHHHHHHHHHTTCCEEEEESSCGG-GSCGGGGCCSSGGGSSE
T ss_pred EEEEEecCCHHHHHHHHHHhhhcCccEEEEccccceeccHHHHHHHHhcCCCEEEEEcCCcc-ccccchhcccccccceE
Confidence 577777766777777777664 6889999999999999998 67899993 3332 233 44444566
Q ss_pred EeCC-CHHHHHHHHHHHHhcC
Q 027511 95 LAEP-DPGDMVLAIRKAISLL 114 (222)
Q Consensus 95 ~~~~-~~~~la~~i~~ll~~~ 114 (222)
.... ..+...-+|..+++..
T Consensus 139 vI~G~G~~gY~lAl~~l~~~l 159 (167)
T 3kip_A 139 VICGLGVYGYTAAIEYALNYQ 159 (167)
T ss_dssp EEESSTTHHHHHHHHHHTTCC
T ss_pred EEEeCChhhHHHHHHHHHHHh
Confidence 6666 6788888888877653
No 83
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=65.24 E-value=24 Score=28.81 Aligned_cols=67 Identities=16% Similarity=0.081 Sum_probs=39.6
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
|+++++-+.+ ...+..++.+++++.+. + ..++.+++.. .|+++.++-...-.-.+.+|+..|++|++
T Consensus 47 ~~~~lvav~d-~~~~~a~~~a~~~g~~~-~-------y~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~ 115 (350)
T 4had_A 47 ENCVVTAIAS-RDLTRAREMADRFSVPH-A-------FGSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVC 115 (350)
T ss_dssp SSEEEEEEEC-SSHHHHHHHHHHHTCSE-E-------ESSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEEEC-CCHHHHHHHHHHcCCCe-e-------eCCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEEE
Confidence 4444443333 23455566666666531 1 2467777866 47765555444334456789999999986
No 84
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=63.15 E-value=37 Score=24.66 Aligned_cols=94 Identities=19% Similarity=0.119 Sum_probs=64.7
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc--c----EEEEcCCCccccHHHHHHHH-hCCcEEE---eCCCCccc
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG--H----IFLNSSLTEAFCIAILEAAS-CGLLTVS---TRVGGVPE 86 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a--d----v~v~~s~~E~~g~~ilEAma-~G~PvVa---~~~gg~~e 86 (222)
..+++.++++++ .+.|.-+=...++-+.+..+ + +.++|.-+.+.++++..|++ .++|+|= ||+-. +|
T Consensus 31 ~~l~~~a~~~g~--~v~~~QSN~EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~VEVHiSNi~a-RE 107 (149)
T 2uyg_A 31 ALCEAWGAELGL--GVVFRQTNYEGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLPVVEVHLTNLHA-RE 107 (149)
T ss_dssp HHHHHHHHHTTC--CEEEEECSCHHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCEEEEESSCGGG-SC
T ss_pred HHHHHHHHHcCC--EEEEEeeCCHHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHhCCCCEEEEEecCccc-cc
Confidence 556666777776 47787776677788877765 2 57899999999999999984 6799993 33322 23
Q ss_pred ------cccCCceEEeCC-CHHHHHHHHHHHHhc
Q 027511 87 ------VLPDDMVVLAEP-DPGDMVLAIRKAISL 113 (222)
Q Consensus 87 ------~i~~~~~g~~~~-~~~~la~~i~~ll~~ 113 (222)
++.+-..|.... -.+...-++..+++.
T Consensus 108 ~FRh~S~~s~~a~GvI~G~G~~gY~lAl~~~~~~ 141 (149)
T 2uyg_A 108 EFRRHSVTAPACRGIVSGFGPLSYKLALVYLAET 141 (149)
T ss_dssp GGGGCCSSGGGSSEEEESSTTHHHHHHHHHHHHC
T ss_pred ccccccccccceeEEEEecCHHHHHHHHHHHHHH
Confidence 344445566655 667777777766654
No 85
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=62.56 E-value=63 Score=26.46 Aligned_cols=80 Identities=9% Similarity=0.024 Sum_probs=54.2
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh----------hHHHHHHHhccEEEEc-CCC-c---cccHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH----------AQVRSVLISGHIFLNS-SLT-E---AFCIAILE 68 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~----------~~~~~ll~~adv~v~~-s~~-E---~~g~~ilE 68 (222)
+-++-|+|-|..-..+.+.+...|. +|.....-+. +++.+++..+|+++.. +.+ + -++-..++
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGFGA--KVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC--EEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHh
Confidence 4578899999888888888887775 4665543321 1577889999997653 222 2 24456778
Q ss_pred HHHhCCcEEEeCCCCcc
Q 027511 69 AASCGLLTVSTRVGGVP 85 (222)
Q Consensus 69 Ama~G~PvVa~~~gg~~ 85 (222)
.|.-|.-+|.+..|++.
T Consensus 224 ~mk~ga~lIn~arg~~v 240 (333)
T 1j4a_A 224 KMKQDVVIVNVSRGPLV 240 (333)
T ss_dssp HSCTTEEEEECSCGGGB
T ss_pred hCCCCcEEEECCCCccc
Confidence 88778777776666544
No 86
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=62.46 E-value=26 Score=25.62 Aligned_cols=93 Identities=15% Similarity=0.166 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----c-EEEEcCCCccccHHHHHHH-HhCCcEEE---eCCCCccc-
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----H-IFLNSSLTEAFCIAILEAA-SCGLLTVS---TRVGGVPE- 86 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----d-v~v~~s~~E~~g~~ilEAm-a~G~PvVa---~~~gg~~e- 86 (222)
..+++.+.++++ .+.|.-+=...++-+.+..+ | +.++|.-+.+.++++..|+ +.++|+|= ||+- -+|
T Consensus 39 ~~l~~~a~~~g~--~~~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~~~~P~VEVHiSNi~-aRE~ 115 (153)
T 3lwz_A 39 SQLEIQAQGMDV--ALSHLQSNAEHALIDSIHQARGNTDFILINPAAFTHTSVALRDALLGVQIPFIEIHLSNVH-AREP 115 (153)
T ss_dssp HHHHHHHHHTTE--EEEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGGGTCHHHHHHHHHHTCCEEEEESSCGG-GSCG
T ss_pred HHHHHHHHHcCC--EEEEEecCCHHHHHHHHHHhhhcCceEEEccccceechHHHHHHHHhcCCCEEEEEcCCcc-ccch
Confidence 445555666665 47776666567777777664 3 5789999999999999987 67899993 3332 223
Q ss_pred -----cccCCceEEeCC-CHHHHHHHHHHHHh
Q 027511 87 -----VLPDDMVVLAEP-DPGDMVLAIRKAIS 112 (222)
Q Consensus 87 -----~i~~~~~g~~~~-~~~~la~~i~~ll~ 112 (222)
++.+-..|.... ..+...-++..+++
T Consensus 116 FRh~S~~s~~a~GvI~G~G~~gY~lAl~~~~~ 147 (153)
T 3lwz_A 116 FRHHSYLSDIAVGVICGLGADGYNFALQAAVN 147 (153)
T ss_dssp GGGCCSSGGGSSEEEESSTTHHHHHHHHHHHH
T ss_pred hhhcccccccceEEEEecChhHHHHHHHHHHH
Confidence 333334565555 56666666665554
No 87
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=61.93 E-value=29 Score=28.40 Aligned_cols=81 Identities=12% Similarity=0.167 Sum_probs=55.0
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC-----------hhHHHHHHHhccEEEE-cCCC-cc---ccHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP-----------HAQVRSVLISGHIFLN-SSLT-EA---FCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~-----------~~~~~~ll~~adv~v~-~s~~-E~---~g~~il 67 (222)
+.++-|+|-|..-..+.+.++.+|. +|.....-+ ..++.++++.||+++. .+.+ ++ ++-..+
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l 216 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAWGF--PLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELL 216 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTC--CEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCC--EEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHH
Confidence 4568899999888888888887775 354432211 2578999999999764 3322 22 455677
Q ss_pred HHHHhCCcEEEeCCCCccc
Q 027511 68 EAASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 68 EAma~G~PvVa~~~gg~~e 86 (222)
..|--|.-+|-+..|++.+
T Consensus 217 ~~mk~gailIN~aRG~~vd 235 (315)
T 3pp8_A 217 DQLPDGAYVLNLARGVHVQ 235 (315)
T ss_dssp TTSCTTEEEEECSCGGGBC
T ss_pred hhCCCCCEEEECCCChhhh
Confidence 7777787777776666543
No 88
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=61.91 E-value=27 Score=25.56 Aligned_cols=93 Identities=16% Similarity=0.152 Sum_probs=62.6
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----c-EEEEcCCCccccHHHHHHH-HhCCcEEE---eCCCCccc-
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----H-IFLNSSLTEAFCIAILEAA-SCGLLTVS---TRVGGVPE- 86 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----d-v~v~~s~~E~~g~~ilEAm-a~G~PvVa---~~~gg~~e- 86 (222)
..+++.++++++ .+.|.-+=...++-+.+..+ | +.++|.-+.+.++++..|+ +.++|+|= ||+-. +|
T Consensus 33 ~~l~~~a~~~g~--~l~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~VEVHiSNi~a-RE~ 109 (154)
T 1uqr_A 33 QHLQQSAQAQGY--ELDYFQANGEESLINRIHQAFQNTDFIIINPGAFTHTSVAIRDALLAVSIPFIEVHLSNVHA-REP 109 (154)
T ss_dssp HHHHHHHHHTTC--EEEEEECSSHHHHHHHHHHTTTTCCEEEEECTTHHHHCHHHHHHHHHHTCCEEEEESSCGGG-SCG
T ss_pred HHHHHHHHHCCC--EEEEEeeCCHHHHHHHHHHhhhcCcEEEECcchhccchHHHHHHHHhCCCCEEEEEecCccc-ccc
Confidence 455666677776 47777776677888888776 2 5789999999999999997 57899993 33322 33
Q ss_pred -----cccCCceEEeCC-CHHHHHHHHHHHHh
Q 027511 87 -----VLPDDMVVLAEP-DPGDMVLAIRKAIS 112 (222)
Q Consensus 87 -----~i~~~~~g~~~~-~~~~la~~i~~ll~ 112 (222)
++.+-..|.... -.+...-++..+++
T Consensus 110 FRh~S~~s~~a~GvI~G~G~~gY~lAl~a~~~ 141 (154)
T 1uqr_A 110 FRHHSYLSDVAKGVICGLGAKGYDYALDFAIS 141 (154)
T ss_dssp GGSCCSSGGGSSEEEESSTTHHHHHHHHHHHH
T ss_pred cccccccCcceeEEEEecCHHHHHHHHHHHHH
Confidence 333335566555 55666666665543
No 89
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=61.63 E-value=34 Score=23.03 Aligned_cols=96 Identities=11% Similarity=0.095 Sum_probs=55.2
Q ss_pred CceEEEEE-cCCc----cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHH--hCCc
Q 027511 3 VKVRFIVG-GDGP----KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAAS--CGLL 75 (222)
Q Consensus 3 p~~~lvi~-G~g~----~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma--~G~P 75 (222)
|..+++++ |.|- ....+++.+++.+++-.|.-.+. .++...+..+|+++.+...... ..=++..+ .++|
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~---~~~~~~~~~~D~Ii~t~~l~~~-~~~~~~~~~~~~~p 78 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAE---TRLSEVVDRFDVVLLAPQSRFN-KKRLEEITKPKGIP 78 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECS---TTHHHHTTTCSEEEECSCCSSH-HHHHHHHHHHHTCC
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecH---HHHHhhcCCCCEEEECCccHHH-HHHHHHHhcccCCC
Confidence 44665555 4442 23567777777787544544444 5666667889999988765432 33334332 5899
Q ss_pred EEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHhc
Q 027511 76 TVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAISL 113 (222)
Q Consensus 76 vVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~~ 113 (222)
|+.-+.-.+. --|.+++.+.+.+++..
T Consensus 79 v~~I~~~~y~-----------~~d~~~vl~~i~~~l~~ 105 (109)
T 2l2q_A 79 IEIINTIDYG-----------TMNGEKVLQLAINAFNN 105 (109)
T ss_dssp EEECCHHHHH-----------HTCHHHHHHHHHHHHHH
T ss_pred EEEEChHHhc-----------cCCHHHHHHHHHHHHhc
Confidence 9764321110 01456676666666653
No 90
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=61.44 E-value=68 Score=26.50 Aligned_cols=81 Identities=12% Similarity=0.087 Sum_probs=57.4
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh---------hHHHHHHHhccEEEE-cCC----CccccHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH---------AQVRSVLISGHIFLN-SSL----TEAFCIAILEA 69 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~---------~~~~~ll~~adv~v~-~s~----~E~~g~~ilEA 69 (222)
+-++-|+|-|..-..+.+.++.+|. +|.....-+. .++.++++.||+++. .+. ..-++-..+..
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~ 225 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMGA--KVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKE 225 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred CCeEEEEecCHHHHHHHHHHhhCCC--EEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhh
Confidence 4478899999888888888888775 4655443221 257889999999764 332 22356678888
Q ss_pred HHhCCcEEEeCCCCccc
Q 027511 70 ASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 70 ma~G~PvVa~~~gg~~e 86 (222)
|--|.-+|-+..|++.+
T Consensus 226 mk~gailIN~aRg~~vd 242 (343)
T 2yq5_A 226 MKKSAYLINCARGELVD 242 (343)
T ss_dssp SCTTCEEEECSCGGGBC
T ss_pred CCCCcEEEECCCChhhh
Confidence 88898888877776543
No 91
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=61.40 E-value=24 Score=26.25 Aligned_cols=94 Identities=15% Similarity=0.100 Sum_probs=63.5
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----c-EEEEcCCCccccHHHHHHH-HhCCcEEE---eCCCCccc-
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----H-IFLNSSLTEAFCIAILEAA-SCGLLTVS---TRVGGVPE- 86 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----d-v~v~~s~~E~~g~~ilEAm-a~G~PvVa---~~~gg~~e- 86 (222)
..+++.+.++++ .+.|.-+=...++-+.+..| | +.++|.-+-+.++++..|+ +.++|+|= +|+- -+|
T Consensus 60 ~~l~~~a~~~G~--~l~~~QSN~EGeLId~Ih~A~~~~dgIIINPgAyTHtSvAlrDAL~~v~~P~VEVHiSNih-aRE~ 136 (172)
T 3n8k_A 60 ALIEREAAELGL--KAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIEVHISNVH-AREE 136 (172)
T ss_dssp HHHHHHHHHTTC--EEEEEECSCHHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHTTCCSCEEEEESSCTT-SSCG
T ss_pred HHHHHHHHHcCC--EEEEEecCCHHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHhCCCCEEEEEcCCch-hccc
Confidence 455556666776 47776666567777776654 3 6789999999999999998 56899993 3332 233
Q ss_pred -----cccCCceEEeCC-CHHHHHHHHHHHHhc
Q 027511 87 -----VLPDDMVVLAEP-DPGDMVLAIRKAISL 113 (222)
Q Consensus 87 -----~i~~~~~g~~~~-~~~~la~~i~~ll~~ 113 (222)
++.+-..|.... -.+...-++..+++.
T Consensus 137 FRhhS~is~~a~GvI~G~G~~gY~lAl~al~~~ 169 (172)
T 3n8k_A 137 FRRHSYLSPIATGVIVGLGIQGYLLALRYLAEH 169 (172)
T ss_dssp GGGCCSSGGGSSEEEESSTTHHHHHHHHHHHHT
T ss_pred ccccccccccceEEEEeCChHHHHHHHHHHHHH
Confidence 333445566555 667777777766653
No 92
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=61.10 E-value=55 Score=25.30 Aligned_cols=86 Identities=8% Similarity=-0.011 Sum_probs=46.5
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHH-----------------HhccEEEEcCCCccccHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVL-----------------ISGHIFLNSSLTEAFCIAI 66 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll-----------------~~adv~v~~s~~E~~g~~i 66 (222)
+-+++|+|.|..-....+...+.|- +|+....-..+++..+. ..+|+++.++..+.....+
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA--~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~N~~I 108 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGA--AITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQAVNKFV 108 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCC--CEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--EEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHHHHHHH
Confidence 4567888988665444444444442 45554333334444443 3456666555555556666
Q ss_pred HHHHHhCCcEEEeCCCCccccccCC
Q 027511 67 LEAASCGLLTVSTRVGGVPEVLPDD 91 (222)
Q Consensus 67 lEAma~G~PvVa~~~gg~~e~i~~~ 91 (222)
.++...|+||-..+.....+++-+.
T Consensus 109 ~~~ak~gi~VNvvD~p~~~~f~~Pa 133 (223)
T 3dfz_A 109 KQHIKNDQLVNMASSFSDGNIQIPA 133 (223)
T ss_dssp HHHSCTTCEEEC-----CCSEECCE
T ss_pred HHHHhCCCEEEEeCCcccCeEEEee
Confidence 6666689999888887766665443
No 93
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=60.86 E-value=13 Score=24.64 Aligned_cols=62 Identities=11% Similarity=0.197 Sum_probs=43.2
Q ss_pred CceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 3 VKVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 3 p~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.+..|++.|.-+ .+++++++++.+|- .+.+.++. ..|++|... ..|.++-.|...|+|||.-
T Consensus 9 ~G~~~v~TG~l~~~R~e~~~~i~~~Gg----~v~~sVsk--------kt~~LV~g~---~~gsK~~kA~~lgI~Ii~E 71 (92)
T 1l7b_A 9 KGLTFVITGELSRPREEVKALLRRLGA----KVTDSVSR--------KTSYLVVGE---NPGSKLEKARALGVPTLTE 71 (92)
T ss_dssp TTCEEECSTTTTSCHHHHHHHHHHTTC----EEESCCSS--------SCCCBEECS---SSSTTHHHHHCSSSCCEEH
T ss_pred CCcEEEEecCCCCCHHHHHHHHHHcCC----EEeCcccC--------CeeEEEeCC---CCChHHHHHHHcCCcEEeH
Confidence 356788888422 78888888888874 25566652 456666553 3467888999999998863
No 94
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=60.69 E-value=33 Score=27.86 Aligned_cols=40 Identities=13% Similarity=0.022 Sum_probs=27.8
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
.++.+++. ..|+++.++-...-.-.+.+|+..|++|++-.
T Consensus 57 ~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EK 98 (330)
T 3e9m_A 57 GSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEK 98 (330)
T ss_dssp SSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECS
T ss_pred CCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeC
Confidence 56677777 67887665554444445678999999998643
No 95
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=59.82 E-value=6.5 Score=31.61 Aligned_cols=77 Identities=16% Similarity=0.149 Sum_probs=48.4
Q ss_pred CceEEEEEcC-CccHHHHHHHHHHcCCCCcEEEeCCCC------------------------hhHHHHHHHhccEEEEcC
Q 027511 3 VKVRFIVGGD-GPKRVRLEEMREKHSLQDRVEMLGAVP------------------------HAQVRSVLISGHIFLNSS 57 (222)
Q Consensus 3 p~~~lvi~G~-g~~~~~l~~~~~~~~l~~~V~~~g~v~------------------------~~~~~~ll~~adv~v~~s 57 (222)
.++++.|+|- |..-..+.+.+.+.. .+.+.+-+. .+++..++..+|+.+-.+
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~---~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft 80 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALE---GVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT 80 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHST---TEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCC---CCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcC
Confidence 3589999996 877766666544321 122221110 133556667899999555
Q ss_pred CCccccHHHHHHHHhCCcEEEeCCC
Q 027511 58 LTEAFCIAILEAASCGLLTVSTRVG 82 (222)
Q Consensus 58 ~~E~~g~~ilEAma~G~PvVa~~~g 82 (222)
..+..--.+..++..|+|+|....|
T Consensus 81 ~p~~~~~~~~~a~~~G~~vVigTtG 105 (273)
T 1dih_A 81 RPEGTLNHLAFCRQHGKGMVIGTTG 105 (273)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred ChHHHHHHHHHHHhCCCCEEEECCC
Confidence 5555555667888999999985554
No 96
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=59.44 E-value=13 Score=31.79 Aligned_cols=75 Identities=12% Similarity=0.189 Sum_probs=54.0
Q ss_pred CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCC-----------CC---------------hhHHHHHHHhccEEEE
Q 027511 2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGA-----------VP---------------HAQVRSVLISGHIFLN 55 (222)
Q Consensus 2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~-----------v~---------------~~~~~~ll~~adv~v~ 55 (222)
.++.++++.|.|.--..+-+++..+|. .+|.+... +. ...+.+.+..+|+||-
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga-~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG 264 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGA-TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIG 264 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCC-CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEe
Confidence 468899999999887777777777786 35665432 11 1236778888999999
Q ss_pred cCCCccccHHHHHHHHhCCcEEE
Q 027511 56 SSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 56 ~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.|....|.--+++.|+- .|||-
T Consensus 265 ~Sapgl~T~EmVk~Ma~-~pIIf 286 (398)
T 2a9f_A 265 VSAPGVLKAEWISKMAA-RPVIF 286 (398)
T ss_dssp CCSTTCCCHHHHHTSCS-SCEEE
T ss_pred cCCCCCCCHHHHHhhCC-CCEEE
Confidence 88766777778888874 46653
No 97
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=58.70 E-value=59 Score=27.62 Aligned_cols=39 Identities=15% Similarity=-0.015 Sum_probs=27.3
Q ss_pred hHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
+++.+++.. .|+++.++-...-.-.++.||..|++|++-
T Consensus 81 ~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~E 121 (444)
T 2ixa_A 81 DDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGKIVGME 121 (444)
T ss_dssp TTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEe
Confidence 367788874 677666555444455667899999999863
No 98
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=58.60 E-value=30 Score=24.92 Aligned_cols=93 Identities=18% Similarity=0.185 Sum_probs=62.4
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----c-EEEEcCCCccccHHHHHHHH-hCCcEEE---eCCCCccc-
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----H-IFLNSSLTEAFCIAILEAAS-CGLLTVS---TRVGGVPE- 86 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----d-v~v~~s~~E~~g~~ilEAma-~G~PvVa---~~~gg~~e- 86 (222)
..+++.++++++ .+.|.-+=...++-+.+..+ | +.++|.-+.+.++++..|++ .++|+|= ||+-. +|
T Consensus 32 ~~l~~~a~~~g~--~~~~~QSN~EgeLid~Ih~a~~~~dgiiiNpgA~THtSvAlrDAl~~v~~P~VEVHiSNi~a-RE~ 108 (143)
T 1gqo_A 32 TDLFQFAEALHI--QLTFFQSNHEGDLIDAIHEAEEQYSGIVLNPGALSHYSYAIRDAVSSISLPVVEVHLSNLYA-REE 108 (143)
T ss_dssp HHHHHHHHHHTC--EEEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCEEEEESSCGGG-SCG
T ss_pred HHHHHHHHHcCC--EEEEEeeCCHHHHHHHHHHhhhcCcEEEEccchhccccHHHHHHHHhCCCCEEEEEecCccc-ccc
Confidence 455566677776 47777776677777777665 2 57899999999999999984 6799993 33322 23
Q ss_pred -----cccCCceEEeCC-CHHHHHHHHHHHHh
Q 027511 87 -----VLPDDMVVLAEP-DPGDMVLAIRKAIS 112 (222)
Q Consensus 87 -----~i~~~~~g~~~~-~~~~la~~i~~ll~ 112 (222)
++.+-..|.... ..+...-++..+++
T Consensus 109 FRh~S~~s~~a~GvI~G~G~~gY~lAl~~~~~ 140 (143)
T 1gqo_A 109 FRHQSVIAPVAKGQIVGLGAEGYKLAVRYLLS 140 (143)
T ss_dssp GGGCCSSGGGSSEEEESSTTHHHHHHHHHHHT
T ss_pred cccccccccceeEEEEecCHHHHHHHHHHHHH
Confidence 333445566555 56666666666553
No 99
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.51 E-value=41 Score=23.05 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=42.6
Q ss_pred CceEEEEEcCC--ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 3 VKVRFIVGGDG--PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 3 p~~~lvi~G~g--~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.+..|+|.|.- -.+++++++++.+|- .+.+.|+. ..|++|.... .-+.++-.|...|+|||.
T Consensus 24 ~G~~~v~TG~l~~~~R~e~~~~i~~~Gg----kv~~sVSk--------kTd~LV~G~~--~g~sKl~KA~~lgI~Iis 87 (112)
T 2ebu_A 24 EGLIFVITGVLESIERDEAKSLIERYGG----KVTGNVSK--------KTNYLVMGRD--SGQSKSDKAAALGTKIID 87 (112)
T ss_dssp TTCEEEECSCCSSSCHHHHHHHHHHTTC----EECSSCCS--------SCCEEEECSS--CCSHHHHHHHHHTCEEEE
T ss_pred CCCEEEEeeeCCCCCHHHHHHHHHHcCC----EEeccccC--------CeeEEEecCC--CChHHHHHHHHcCCeEEe
Confidence 35678888853 367888888888763 34566652 4566666532 223788899999999985
No 100
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=58.34 E-value=22 Score=28.72 Aligned_cols=74 Identities=15% Similarity=0.034 Sum_probs=44.8
Q ss_pred CCceEEEEEcC-CccHHHHHHHHHHcCCCCcEEE----------eCCCChhHHHHHHH--hccEEEEcCCCccccHHHHH
Q 027511 2 RVKVRFIVGGD-GPKRVRLEEMREKHSLQDRVEM----------LGAVPHAQVRSVLI--SGHIFLNSSLTEAFCIAILE 68 (222)
Q Consensus 2 ~p~~~lvi~G~-g~~~~~l~~~~~~~~l~~~V~~----------~g~v~~~~~~~ll~--~adv~v~~s~~E~~g~~ilE 68 (222)
.|+.+++|+|- |..-..+-+...+++.. .|.- .|.--..++.++.. ..|+.+...-.+.-.-.+.|
T Consensus 11 ~~~~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~~v~e 89 (294)
T 2yv1_A 11 DENTKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAPFAKDAVFE 89 (294)
T ss_dssp CTTCCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCHHHHHHHHHH
Confidence 46778888885 54444344444445543 2211 12111245667776 78998876666666777788
Q ss_pred HHHhCCcE
Q 027511 69 AASCGLLT 76 (222)
Q Consensus 69 Ama~G~Pv 76 (222)
+...|++.
T Consensus 90 a~~~Gi~~ 97 (294)
T 2yv1_A 90 AIDAGIEL 97 (294)
T ss_dssp HHHTTCSE
T ss_pred HHHCCCCE
Confidence 88888883
No 101
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=57.66 E-value=62 Score=26.47 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=54.4
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC---------hhHHHHHHHhccEEEE-cCCC----ccccHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP---------HAQVRSVLISGHIFLN-SSLT----EAFCIAILEA 69 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~---------~~~~~~ll~~adv~v~-~s~~----E~~g~~ilEA 69 (222)
+-++-|+|-|..-..+.+.+..+|. +|.....-+ ..++.+++..+|+++. .+.+ .-++-..+..
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~ 223 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGMGA--TVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKK 223 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC--EEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhh
Confidence 4578899999888888888887775 355544321 1257889999999765 3322 2244567888
Q ss_pred HHhCCcEEEeCCCCcc
Q 027511 70 ASCGLLTVSTRVGGVP 85 (222)
Q Consensus 70 ma~G~PvVa~~~gg~~ 85 (222)
|.-|.-+|-+..|++.
T Consensus 224 mk~ga~lin~srg~~v 239 (331)
T 1xdw_A 224 MKDGAILVNCARGQLV 239 (331)
T ss_dssp SCTTEEEEECSCGGGB
T ss_pred CCCCcEEEECCCcccc
Confidence 8888777766666544
No 102
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=57.56 E-value=32 Score=27.85 Aligned_cols=40 Identities=10% Similarity=0.048 Sum_probs=28.3
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
.++.+++. ..|+++.++-...-.-.+.+|+..|++|++-.
T Consensus 53 ~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EK 94 (331)
T 4hkt_A 53 RTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEK 94 (331)
T ss_dssp CCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred CCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEec
Confidence 45667777 67887766655544556678999999998643
No 103
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=57.56 E-value=50 Score=24.06 Aligned_cols=67 Identities=12% Similarity=0.024 Sum_probs=39.9
Q ss_pred HHHHhccEEEEcCCCccccHHHHH---HHHhCCcEEEeCCCCccccc---cCC------ceEEeCCCHHHHHHHHHHHHh
Q 027511 45 SVLISGHIFLNSSLTEAFCIAILE---AASCGLLTVSTRVGGVPEVL---PDD------MVVLAEPDPGDMVLAIRKAIS 112 (222)
Q Consensus 45 ~ll~~adv~v~~s~~E~~g~~ilE---Ama~G~PvVa~~~gg~~e~i---~~~------~~g~~~~~~~~la~~i~~ll~ 112 (222)
..+++||++|.--. +.-..+.+| |.+.|+|||.-........+ ..+ ...... |.+++...|...+.
T Consensus 73 ~~i~~aD~vva~~~-~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M~~g~~~~~~~~~~~y-~~~el~~~l~~~~~ 150 (165)
T 2khz_A 73 NWLQQADVVVAEVT-QPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDY-AEGEVETMLDRYFE 150 (165)
T ss_dssp HHHHHCSEEEEECS-SCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHHHHHTCCSSSEEEEEC-CTTTHHHHHHHHHH
T ss_pred HHHHhCCEEEEECC-CCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhhhcccCccceeEEEec-CHHHHHHHHHHHHH
Confidence 68899999875322 444455556 67899999975332211111 011 111233 77888888888887
Q ss_pred c
Q 027511 113 L 113 (222)
Q Consensus 113 ~ 113 (222)
.
T Consensus 151 ~ 151 (165)
T 2khz_A 151 A 151 (165)
T ss_dssp T
T ss_pred h
Confidence 5
No 104
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=57.50 E-value=44 Score=27.33 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=26.9
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
.++.+++. ..|+++.++-...-.-.+..|+..|++|++-.
T Consensus 56 ~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EK 97 (354)
T 3db2_A 56 ATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEK 97 (354)
T ss_dssp SSHHHHHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEES
T ss_pred CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEcc
Confidence 45677774 46776665554444445678999999998643
No 105
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=57.45 E-value=38 Score=24.50 Aligned_cols=93 Identities=15% Similarity=0.113 Sum_probs=63.2
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----c-EEEEcCCCccccHHHHHHHH-hCCcEEE---eCCCCccc-
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----H-IFLNSSLTEAFCIAILEAAS-CGLLTVS---TRVGGVPE- 86 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----d-v~v~~s~~E~~g~~ilEAma-~G~PvVa---~~~gg~~e- 86 (222)
..+++.++++++ .+.|.-+=...++-+.+..+ | +.++|.-+.+.++++..|++ .++|+|= ||+-. +|
T Consensus 34 ~~l~~~a~~~g~--~~~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~v~~P~VEVHiSNi~a-RE~ 110 (146)
T 1h05_A 34 ALIEREAAELGL--KAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHA-REE 110 (146)
T ss_dssp HHHHHHHHHTTC--EEEEEECSCHHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHHTCCSCEEEEESSCGGG-SCG
T ss_pred HHHHHHHHHcCC--EEEEEeeCCHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhCCCCEEEEEecCccc-ccc
Confidence 455566677776 47777776667777777665 3 68899999999999999984 6799993 33322 33
Q ss_pred -----cccCCceEEeCC-CHHHHHHHHHHHHh
Q 027511 87 -----VLPDDMVVLAEP-DPGDMVLAIRKAIS 112 (222)
Q Consensus 87 -----~i~~~~~g~~~~-~~~~la~~i~~ll~ 112 (222)
++.+-..|.... ..+...-++..+++
T Consensus 111 FRh~S~~s~~a~GvI~G~G~~gY~lAl~~~~~ 142 (146)
T 1h05_A 111 FRRHSYLSPIATGVIVGLGIQGYLLALRYLAE 142 (146)
T ss_dssp GGGCCSSGGGSSEEEESSTTHHHHHHHHHHHH
T ss_pred cccccccccceeEEEEecCHHHHHHHHHHHHH
Confidence 344445566655 66777777776654
No 106
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=56.54 E-value=44 Score=22.86 Aligned_cols=98 Identities=10% Similarity=0.160 Sum_probs=52.6
Q ss_pred CceEEEEEcCCccHHHHHHHHHHc---CCCCc---EEEeCCCChhHHHHHHHhccEEEEcCCC--ccccHHHHHHHHhCC
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKH---SLQDR---VEMLGAVPHAQVRSVLISGHIFLNSSLT--EAFCIAILEAASCGL 74 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~---~l~~~---V~~~g~v~~~~~~~ll~~adv~v~~s~~--E~~g~~ilEAma~G~ 74 (222)
++.++.|++.|.......+.++.+ |..-. +.++-.++.+.+.+++++++.++..-.. .+++.-+- +.+|.
T Consensus 12 ~g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvvE~~~~G~l~~~i~--~~~~~ 89 (118)
T 3ju3_A 12 KEADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESNYTAQAAQMIK--LYTGI 89 (118)
T ss_dssp SSCSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSCCCCCCCCCCCCHHHHHH--HHHCC
T ss_pred CCCCEEEEEECccHHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcCCCEEEEEECCCCCcHHHHHH--HHcCC
Confidence 345567777777766665554443 44322 3334456778899999888765543332 33343332 23443
Q ss_pred cEEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHh
Q 027511 75 LTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAIS 112 (222)
Q Consensus 75 PvVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~ 112 (222)
+++. ...+. + | .+.+++++.+.+.+++.
T Consensus 90 ~~~~-~i~~~------~--G-~~~~~~ei~~~i~~~~~ 117 (118)
T 3ju3_A 90 DIKN-KILKY------N--G-RHMTEDEILKSAKEILN 117 (118)
T ss_dssp CCCC-CCCCB------T--T-BCCCHHHHHHHHHHHHH
T ss_pred Ccee-EEeee------C--C-eeCCHHHHHHHHHHHhh
Confidence 2111 11111 1 1 23478999999988763
No 107
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=56.26 E-value=64 Score=25.98 Aligned_cols=80 Identities=15% Similarity=0.110 Sum_probs=55.3
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC--------hhHHHHHHHhccEEEE-cCC-Cc---cccHHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP--------HAQVRSVLISGHIFLN-SSL-TE---AFCIAILEAA 70 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~--------~~~~~~ll~~adv~v~-~s~-~E---~~g~~ilEAm 70 (222)
+-++-|+|-|..-..+.+.+...|. +|.....-+ .+++.+++..||+++. .+. .+ -++-..+..|
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~m 199 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAFGM--RVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANA 199 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC--EEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTC
T ss_pred cchheeeccCchhHHHHHHHHhhCc--EEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhh
Confidence 4578899999888888888888775 455544321 1378899999999765 222 22 2456677888
Q ss_pred HhCCcEEEeCCCCcc
Q 027511 71 SCGLLTVSTRVGGVP 85 (222)
Q Consensus 71 a~G~PvVa~~~gg~~ 85 (222)
.-|.-+|-+..|++.
T Consensus 200 k~gailIN~aRG~~v 214 (290)
T 3gvx_A 200 RKNLTIVNVARADVV 214 (290)
T ss_dssp CTTCEEEECSCGGGB
T ss_pred hcCceEEEeehhccc
Confidence 888888877666543
No 108
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=55.16 E-value=43 Score=27.20 Aligned_cols=40 Identities=10% Similarity=0.068 Sum_probs=28.4
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
+++.+++. ..|+++.++-...-.-.+.+|+..|++|++-.
T Consensus 54 ~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EK 95 (344)
T 3ezy_A 54 KDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEK 95 (344)
T ss_dssp SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred CCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEEEC
Confidence 45667777 67887766665544555678999999998643
No 109
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=54.14 E-value=7.2 Score=30.81 Aligned_cols=75 Identities=16% Similarity=0.290 Sum_probs=46.7
Q ss_pred eEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC--------hhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcE
Q 027511 5 VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP--------HAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLT 76 (222)
Q Consensus 5 ~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~--------~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~Pv 76 (222)
+++.|+|.|..-..+.+.+.+.+. .-+-....-+ .+++.+++ .+|+.|--+..+..- ..++ +..|+|+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~~~~gv~v~~dl~~l~-~~DVvIDft~p~a~~-~~~~-l~~g~~v 79 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPKATTPYQQYQHIADVK-GADVAIDFSNPNLLF-PLLD-EDFHLPL 79 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC--CCSCBCSCTTTCT-TCSEEEECSCHHHHH-HHHT-SCCCCCE
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCccccCCCceeCCHHHHh-CCCEEEEeCChHHHH-HHHH-HhcCCce
Confidence 688999999888888887776542 2122222211 13445555 899998655544322 3345 8899999
Q ss_pred EEeCCCC
Q 027511 77 VSTRVGG 83 (222)
Q Consensus 77 Va~~~gg 83 (222)
|....|-
T Consensus 80 VigTTG~ 86 (243)
T 3qy9_A 80 VVATTGE 86 (243)
T ss_dssp EECCCSS
T ss_pred EeCCCCC
Confidence 9866653
No 110
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=54.00 E-value=50 Score=26.71 Aligned_cols=38 Identities=11% Similarity=0.016 Sum_probs=26.3
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.++.+++. ..|+++.++-...-.-.+.+|+..|++|++
T Consensus 61 ~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~ 100 (346)
T 3cea_A 61 TNYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFC 100 (346)
T ss_dssp SCHHHHHTTSCCSEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHhcCCCCCEEEEeCChHhHHHHHHHHHHCCCEEEE
Confidence 34666776 478877666554444456688999999987
No 111
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=53.38 E-value=55 Score=26.05 Aligned_cols=76 Identities=9% Similarity=0.038 Sum_probs=50.7
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC---------------hhHHHHHHHhccEEEEcCCCccccHHHH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP---------------HAQVRSVLISGHIFLNSSLTEAFCIAIL 67 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~---------------~~~~~~ll~~adv~v~~s~~E~~g~~il 67 (222)
++-++.|+|-|..-..+.+.+..+|. +|.....-+ .+++.+++..+|+++...-..-++-..+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~--~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~l 231 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGA--KVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALVVTANVL 231 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCCBCHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHHhCHHHH
Confidence 45678899998887777777777775 465544321 1346677888999887654444455677
Q ss_pred HHHHhCCcEEEeC
Q 027511 68 EAASCGLLTVSTR 80 (222)
Q Consensus 68 EAma~G~PvVa~~ 80 (222)
+.|.-|.-+|-..
T Consensus 232 ~~mk~~~~lin~a 244 (293)
T 3d4o_A 232 AEMPSHTFVIDLA 244 (293)
T ss_dssp HHSCTTCEEEECS
T ss_pred HhcCCCCEEEEec
Confidence 7777776666444
No 112
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=53.31 E-value=75 Score=26.27 Aligned_cols=81 Identities=15% Similarity=0.130 Sum_probs=57.4
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC-----------hhHHHHHHHhccEEEE-cCCC----ccccHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP-----------HAQVRSVLISGHIFLN-SSLT----EAFCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~-----------~~~~~~ll~~adv~v~-~s~~----E~~g~~il 67 (222)
+-++-|+|-|..-..+.+.++.+|. +|.....-+ .+++.+++.+||+++. .+.+ .-++-..+
T Consensus 173 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l 250 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRARGFGL--AIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRI 250 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHHTTTC--EEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHH
T ss_pred CCEEEEEEeChhHHHHHHHHHHCCC--EEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHH
Confidence 3578899999888888888887775 466554422 1378899999999664 3332 23566788
Q ss_pred HHHHhCCcEEEeCCCCccc
Q 027511 68 EAASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 68 EAma~G~PvVa~~~gg~~e 86 (222)
..|--|.-+|-+..|++.+
T Consensus 251 ~~mk~gailIN~aRG~~vd 269 (345)
T 4g2n_A 251 AKIPEGAVVINISRGDLIN 269 (345)
T ss_dssp HHSCTTEEEEECSCGGGBC
T ss_pred hhCCCCcEEEECCCCchhC
Confidence 8888888888777776543
No 113
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=52.62 E-value=71 Score=26.48 Aligned_cols=39 Identities=15% Similarity=0.220 Sum_probs=28.1
Q ss_pred hHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++.. .|+++.++-...-.-.+.+|+..|++|++-
T Consensus 54 ~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~E 94 (387)
T 3moi_A 54 ATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVE 94 (387)
T ss_dssp SSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeee
Confidence 456777776 788777666554445667999999999863
No 114
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=52.61 E-value=54 Score=26.93 Aligned_cols=39 Identities=8% Similarity=0.078 Sum_probs=26.2
Q ss_pred hHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++.. .|+++.++-...-.-.+.+|+..|++|++=
T Consensus 77 ~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~E 117 (357)
T 3ec7_A 77 NDYHDLINDKDVEVVIITASNEAHADVAVAALNANKYVFCE 117 (357)
T ss_dssp SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEee
Confidence 445666764 677766655544455667889999998853
No 115
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=51.83 E-value=16 Score=27.35 Aligned_cols=66 Identities=9% Similarity=0.074 Sum_probs=40.7
Q ss_pred HHHhccEEEEcCCCcccc--HHHHHHHHhCCcEEEeCCCCc-cccccC--CceEEeCCCHHHHHHHHHHHHhc
Q 027511 46 VLISGHIFLNSSLTEAFC--IAILEAASCGLLTVSTRVGGV-PEVLPD--DMVVLAEPDPGDMVLAIRKAISL 113 (222)
Q Consensus 46 ll~~adv~v~~s~~E~~g--~~ilEAma~G~PvVa~~~gg~-~e~i~~--~~~g~~~~~~~~la~~i~~ll~~ 113 (222)
+...+|.+|...- ++| ..+.||+..++||++-+.-+. ..++.+ .......+|++++.+.|.+.++.
T Consensus 104 m~~~sda~IvlpG--g~GTL~E~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~~~~ 174 (176)
T 2iz6_A 104 NALSSNVLVAVGM--GPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQLLAK 174 (176)
T ss_dssp CGGGCSEEEEESC--CHHHHHHHHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEEEESSHHHHHHHHHHHHHC
T ss_pred HHHhCCEEEEecC--CccHHHHHHHHHHhCCcEEEEcCcccccccCChhhcCeEEEcCCHHHHHHHHHHHHHh
Confidence 3345677654332 233 456788889999998876221 111211 12345677899999999888754
No 116
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=51.57 E-value=11 Score=29.58 Aligned_cols=77 Identities=21% Similarity=0.141 Sum_probs=43.0
Q ss_pred CCceEEEEEcC----CccHHHHHHHHHHcCCCCcEEEeCC---C--ChhHHH---------HHHHhcc-EEEEcCCCccc
Q 027511 2 RVKVRFIVGGD----GPKRVRLEEMREKHSLQDRVEMLGA---V--PHAQVR---------SVLISGH-IFLNSSLTEAF 62 (222)
Q Consensus 2 ~p~~~lvi~G~----g~~~~~l~~~~~~~~l~~~V~~~g~---v--~~~~~~---------~ll~~ad-v~v~~s~~E~~ 62 (222)
+.+..|.|.|. +..+.+++++++++|- .|.--|+ . +..... .-....+ ..|.+.. ..-
T Consensus 3 F~g~~F~ls~~~~~~~~~k~~L~~~I~~~GG--~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~-~~r 79 (241)
T 2vxb_A 3 FDDCVFAFSGPVHEDAYDRSALETVVQDHGG--LVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDT-FSR 79 (241)
T ss_dssp TTTEEEEECCCSSTTSSCHHHHHHHHHHTTC--EECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSS-CCC
T ss_pred CCCcEEEEecCCCCchhhHHHHHHHHHHCCC--EEecCcchhhccCccccccccccccccccccccccceEEEcCC-CCC
Confidence 34677888876 3577899999999873 2322111 0 000000 0001111 2333332 234
Q ss_pred cHHHHHHHHhCCcEEEeCC
Q 027511 63 CIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 63 g~~ilEAma~G~PvVa~~~ 81 (222)
..+.+.|++.|.|||.+++
T Consensus 80 t~K~~~ala~gipiV~~~W 98 (241)
T 2vxb_A 80 KVKYLEALAFNIPCVHPQF 98 (241)
T ss_dssp CHHHHHHHHHTCCEECTHH
T ss_pred cHHHHHHHHcCCCEecHHH
Confidence 6788999999999998754
No 117
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.35 E-value=58 Score=22.55 Aligned_cols=64 Identities=13% Similarity=0.016 Sum_probs=44.2
Q ss_pred CceEEEEEcC-CccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 3 VKVRFIVGGD-GPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 3 p~~~lvi~G~-g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
.++.|++.|. ...+.+++++++.+|- .+...++. ..+.+|.. +.-+.++..|...|+|||..++
T Consensus 24 ~g~~i~itG~~~~~r~~l~~~i~~~Gg----~v~~~~s~--------~~ThLI~~---~~~~~K~~~A~~~gi~IV~~~W 88 (129)
T 2d8m_A 24 QGVVVVLSGFQNPFRSELRDKALELGA----KYRPDWTR--------DSTHLICA---FANTPKYSQVLGLGGRIVRKEW 88 (129)
T ss_dssp TTEEEEEESCCTTHHHHHHHHHHHTTE----EEESSCCT--------TCCEEEES---SSSCHHHHHHHHHTCEEEETHH
T ss_pred CCeEEEEeCCCcHHHHHHHHHHHHcCC----EEeCCcCC--------CCeEEEec---CCCChHHHHHHHCCCcEecHHH
Confidence 4678888884 3467889999988863 35555542 34555554 3346788889999999998653
No 118
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=51.21 E-value=45 Score=26.91 Aligned_cols=76 Identities=17% Similarity=0.062 Sum_probs=46.0
Q ss_pred CCceEEEEEcC-CccHHHHHHHHHHcCCCCcEEE----------eCCCChhHHHHHHH--h-ccEEEEcCCCccccHHHH
Q 027511 2 RVKVRFIVGGD-GPKRVRLEEMREKHSLQDRVEM----------LGAVPHAQVRSVLI--S-GHIFLNSSLTEAFCIAIL 67 (222)
Q Consensus 2 ~p~~~lvi~G~-g~~~~~l~~~~~~~~l~~~V~~----------~g~v~~~~~~~ll~--~-adv~v~~s~~E~~g~~il 67 (222)
.|+.+++++|- |..-..+-+...+++.. .|.- .|.--...+.++.. . .|+.+...-.+.-.-.+.
T Consensus 11 ~~~~~vvV~Gasg~~G~~~~~~l~~~g~~-~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~~~v~ 89 (297)
T 2yv2_A 11 DSETRVLVQGITGREGSFHAKAMLEYGTK-VVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPAPFAPDAVY 89 (297)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCGGGHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHhCCCc-EEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCHHHHHHHHH
Confidence 47888899885 44333333343444542 1211 12111244666766 4 899887777777777888
Q ss_pred HHHHhCCc-EEE
Q 027511 68 EAASCGLL-TVS 78 (222)
Q Consensus 68 EAma~G~P-vVa 78 (222)
|+...|++ +|.
T Consensus 90 ea~~~Gi~~vVi 101 (297)
T 2yv2_A 90 EAVDAGIRLVVV 101 (297)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHCCCCEEEE
Confidence 89999998 443
No 119
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=50.90 E-value=51 Score=27.80 Aligned_cols=39 Identities=10% Similarity=0.057 Sum_probs=27.0
Q ss_pred hHHHHHHHh-------ccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLIS-------GHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~~-------adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++.. .|+++.++-...-.-.+.+|+..|++|++=
T Consensus 95 ~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~E 140 (417)
T 3v5n_A 95 SDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICD 140 (417)
T ss_dssp SCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTCEEEEE
T ss_pred CCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCCeEEEE
Confidence 456777776 788666555444444567899999999863
No 120
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=50.81 E-value=77 Score=26.74 Aligned_cols=51 Identities=10% Similarity=-0.054 Sum_probs=34.3
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeC------------------CCChhHHHHHHHhccEEEE
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLG------------------AVPHAQVRSVLISGHIFLN 55 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g------------------~v~~~~~~~ll~~adv~v~ 55 (222)
|.-++.|+|.|.....+...++++|+. |..+. ..+.+.+.++..++|++++
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~--v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYR--VAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE--EEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE--EEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 566899999998777888888888873 33332 2233455666666777664
No 121
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=50.60 E-value=39 Score=27.50 Aligned_cols=75 Identities=9% Similarity=0.022 Sum_probs=46.4
Q ss_pred CceEEEEEcCCccHH-HHHHHHHHcCCCCcEEEeCCC----------ChhHHHHHHHh---ccEEEEcCCCccccHHHHH
Q 027511 3 VKVRFIVGGDGPKRV-RLEEMREKHSLQDRVEMLGAV----------PHAQVRSVLIS---GHIFLNSSLTEAFCIAILE 68 (222)
Q Consensus 3 p~~~lvi~G~g~~~~-~l~~~~~~~~l~~~V~~~g~v----------~~~~~~~ll~~---adv~v~~s~~E~~g~~ilE 68 (222)
..+++-|+|-|..-. .......+.. .+.+.+-. ...++.+++.. .|+++.++-...-.-.+..
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~---~~~lvav~d~~~~~~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~ 100 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNA---NFKLVATASRHGTVEGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAYK 100 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCT---TEEEEEEECSSCCCTTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHHH
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCC---CeEEEEEEeCChhhcCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHHH
Confidence 358999999886543 2333333331 23332211 13567888877 7887766665544556778
Q ss_pred HHHhCCcEEEeC
Q 027511 69 AASCGLLTVSTR 80 (222)
Q Consensus 69 Ama~G~PvVa~~ 80 (222)
|+..|++|++=.
T Consensus 101 al~aGkhVl~EK 112 (330)
T 4ew6_A 101 ALVAGKHVFLEK 112 (330)
T ss_dssp HHHTTCEEEECS
T ss_pred HHHcCCcEEEeC
Confidence 999999999643
No 122
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=50.52 E-value=96 Score=26.44 Aligned_cols=81 Identities=14% Similarity=0.163 Sum_probs=58.3
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC---------ChhHHHHHHHhccEEEE-cCCC----ccccHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV---------PHAQVRSVLISGHIFLN-SSLT----EAFCIAILEA 69 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v---------~~~~~~~ll~~adv~v~-~s~~----E~~g~~ilEA 69 (222)
+-++-|+|-|..-..+.+.++.+|. +|.....- ...++.++++.||+++. .+.+ .-++-..+..
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~G~--~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~ 233 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESLGM--TVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRK 233 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--EEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCC--EEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhh
Confidence 4578999999888888888888875 46654421 12468899999999654 3332 2356678888
Q ss_pred HHhCCcEEEeCCCCccc
Q 027511 70 ASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 70 ma~G~PvVa~~~gg~~e 86 (222)
|--|.-+|-+..|++.+
T Consensus 234 mk~gailIN~aRG~vvd 250 (416)
T 3k5p_A 234 MKKGAFLINNARGSDVD 250 (416)
T ss_dssp SCTTEEEEECSCTTSBC
T ss_pred CCCCcEEEECCCChhhh
Confidence 88898888888777554
No 123
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=50.04 E-value=46 Score=27.75 Aligned_cols=38 Identities=16% Similarity=0.030 Sum_probs=26.4
Q ss_pred hHHHHHHHh-------ccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 41 AQVRSVLIS-------GHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 41 ~~~~~ll~~-------adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.++.+++.. .|+++.++-...-.-.+.+|+..|++|++
T Consensus 70 ~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~ 114 (398)
T 3dty_A 70 ADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGLHVVC 114 (398)
T ss_dssp SSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEE
Confidence 456777775 78866555544434456789999999987
No 124
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=49.79 E-value=73 Score=26.28 Aligned_cols=80 Identities=16% Similarity=0.114 Sum_probs=53.2
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC--------hhHHHHHHHhccEEEEc-C-CCcc---ccHHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP--------HAQVRSVLISGHIFLNS-S-LTEA---FCIAILEAA 70 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~--------~~~~~~ll~~adv~v~~-s-~~E~---~g~~ilEAm 70 (222)
+-++-|+|-|..-..+.+.+...|. +|.....-+ ..++.+++..||+++.. + ..++ ++-..++.|
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~m 248 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAFGM--SVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQAL 248 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcC
Confidence 4578899999888888888887775 466554322 24688999999997653 2 2222 455778888
Q ss_pred HhCCcEEEeCCCCcc
Q 027511 71 SCGLLTVSTRVGGVP 85 (222)
Q Consensus 71 a~G~PvVa~~~gg~~ 85 (222)
.-|..+|-+..|++.
T Consensus 249 k~gailIN~aRG~vv 263 (340)
T 4dgs_A 249 GPEGIVVNVARGNVV 263 (340)
T ss_dssp TTTCEEEECSCC---
T ss_pred CCCCEEEECCCCccc
Confidence 889888877766544
No 125
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=49.72 E-value=76 Score=25.96 Aligned_cols=81 Identities=10% Similarity=0.049 Sum_probs=55.7
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC---------hhHHHHHHHhccEEEE-cCCC-c---cccHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP---------HAQVRSVLISGHIFLN-SSLT-E---AFCIAILEA 69 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~---------~~~~~~ll~~adv~v~-~s~~-E---~~g~~ilEA 69 (222)
+-++-|+|-|..-..+.+.++.+|. +|.....-+ ..++.++++.+|+++. .+.+ + -++-..+..
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~ 222 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGFGA--KVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNL 222 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC--EEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhh
Confidence 4578899999888888888887775 355443221 1257889999999765 3332 2 245668888
Q ss_pred HHhCCcEEEeCCCCccc
Q 027511 70 ASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 70 ma~G~PvVa~~~gg~~e 86 (222)
|.-|.-+|-+..|++.+
T Consensus 223 mk~ga~lIn~srg~~vd 239 (333)
T 1dxy_A 223 MKPGAIVINTARPNLID 239 (333)
T ss_dssp SCTTEEEEECSCTTSBC
T ss_pred CCCCcEEEECCCCcccC
Confidence 88888888777776543
No 126
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=49.63 E-value=88 Score=25.90 Aligned_cols=81 Identities=15% Similarity=0.137 Sum_probs=57.2
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC-------------hhHHHHHHHhccEEEE-cCCC-c---cccHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP-------------HAQVRSVLISGHIFLN-SSLT-E---AFCIA 65 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~-------------~~~~~~ll~~adv~v~-~s~~-E---~~g~~ 65 (222)
+-++-|+|-|..-..+.+.++.+|. +|.....-+ .+++.++++.||+++. .+.+ + -++-.
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~ 241 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPFGC--NLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKE 241 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCC--EEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHH
T ss_pred CCEEeEEEeCHHHHHHHHHHHHCCC--EEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHH
Confidence 4578899999888888888887775 466554321 1367889999999764 3322 2 35677
Q ss_pred HHHHHHhCCcEEEeCCCCccc
Q 027511 66 ILEAASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 66 ilEAma~G~PvVa~~~gg~~e 86 (222)
.+..|--|.-+|-+..|++.+
T Consensus 242 ~l~~mk~gailIN~aRG~~vd 262 (351)
T 3jtm_A 242 LIGKLKKGVLIVNNARGAIME 262 (351)
T ss_dssp HHHHSCTTEEEEECSCGGGBC
T ss_pred HHhcCCCCCEEEECcCchhhC
Confidence 888888888888777776543
No 127
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=49.38 E-value=24 Score=29.79 Aligned_cols=84 Identities=12% Similarity=-0.056 Sum_probs=54.4
Q ss_pred cEEEeCCC------ChhHHHHHHHhccEEEEc---CCCccccHHHHHHHHhCCcEEEeCCCCccccccCCceEEeC--CC
Q 027511 31 RVEMLGAV------PHAQVRSVLISGHIFLNS---SLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVVLAE--PD 99 (222)
Q Consensus 31 ~V~~~g~v------~~~~~~~ll~~adv~v~~---s~~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~~~~~g~~~--~~ 99 (222)
.|...|.- +......+++....++.- ...+-.-=++.+|+.+|+.+|.-..+...++++.+....+. ++
T Consensus 207 ~Vd~~G~c~~~~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~~~~~~~Pp~SfI~~~dF~s 286 (371)
T 2nzw_A 207 PVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNVHDFKN 286 (371)
T ss_dssp CCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTSCGGGSEEGGGSSS
T ss_pred CEeeCCCccCCCCCccccHHHHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCCchhhhCCCCceEEcccCCC
Confidence 36666543 225677788777776542 11223344677899999766655445566777776554433 38
Q ss_pred HHHHHHHHHHHHhcC
Q 027511 100 PGDMVLAIRKAISLL 114 (222)
Q Consensus 100 ~~~la~~i~~ll~~~ 114 (222)
++++++-|..+-+++
T Consensus 287 ~~~La~yL~~L~~n~ 301 (371)
T 2nzw_A 287 FDEAIDYIKYLHTHK 301 (371)
T ss_dssp HHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHhcCH
Confidence 999999999998774
No 128
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=49.23 E-value=67 Score=26.03 Aligned_cols=80 Identities=16% Similarity=0.146 Sum_probs=53.0
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC------hhHHHHHHHhccEEEEc-CCC----ccccHHHHHHHHh
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP------HAQVRSVLISGHIFLNS-SLT----EAFCIAILEAASC 72 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~------~~~~~~ll~~adv~v~~-s~~----E~~g~~ilEAma~ 72 (222)
+.++-|+|-|..-..+-+.+...|. +|.....-+ ..++.++++.+|+++.. +.+ .-++-..+..|.-
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ 221 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFGM--RVVYHARTPKPLPYPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKR 221 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCSSSSCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCT
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCC--EEEEECCCCcccccccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCC
Confidence 4578999999888888888887774 465544322 24688899999997653 222 2234456666766
Q ss_pred CCcEEEeCCCCcc
Q 027511 73 GLLTVSTRVGGVP 85 (222)
Q Consensus 73 G~PvVa~~~gg~~ 85 (222)
|.-+|-+..|++.
T Consensus 222 ga~lin~srg~~v 234 (311)
T 2cuk_A 222 GAILLNTARGALV 234 (311)
T ss_dssp TCEEEECSCGGGB
T ss_pred CcEEEECCCCCcc
Confidence 7777766556543
No 129
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=48.99 E-value=50 Score=26.47 Aligned_cols=76 Identities=18% Similarity=0.111 Sum_probs=46.9
Q ss_pred CCceEEEEEcC-CccHHHHHHHHHHcCCCCcEE----------EeCCCChhHHHHHHH--hccEEEEcCCCccccHHHHH
Q 027511 2 RVKVRFIVGGD-GPKRVRLEEMREKHSLQDRVE----------MLGAVPHAQVRSVLI--SGHIFLNSSLTEAFCIAILE 68 (222)
Q Consensus 2 ~p~~~lvi~G~-g~~~~~l~~~~~~~~l~~~V~----------~~g~v~~~~~~~ll~--~adv~v~~s~~E~~g~~ilE 68 (222)
.++.++.++|- |..-...-+...+++.. -|. ..|.--..++.++.. ..|+.+...-.+.-.-.+.|
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~~e 83 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILE 83 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHHHH
Confidence 35789999995 75444444434444532 111 111111245677777 78998877777777778888
Q ss_pred HHHhCCcEEE
Q 027511 69 AASCGLLTVS 78 (222)
Q Consensus 69 Ama~G~PvVa 78 (222)
++..|++++.
T Consensus 84 a~~~Gi~~iV 93 (288)
T 2nu8_A 84 AIDAGIKLII 93 (288)
T ss_dssp HHHTTCSEEE
T ss_pred HHHCCCCEEE
Confidence 8888888643
No 130
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=48.87 E-value=49 Score=26.84 Aligned_cols=69 Identities=12% Similarity=0.056 Sum_probs=40.2
Q ss_pred CceEEEEEcCCc---cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEE
Q 027511 3 VKVRFIVGGDGP---KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTV 77 (222)
Q Consensus 3 p~~~lvi~G~g~---~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvV 77 (222)
|+++++-+.+.. ..+.+.+.+++++...+ . ..++.+++.. .|+++.++-...-.-.+.+|+..|++|+
T Consensus 23 ~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl 95 (337)
T 3ip3_A 23 EECSITGIAPGVPEEDLSKLEKAISEMNIKPK--K-----YNNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAF 95 (337)
T ss_dssp TTEEEEEEECSSTTCCCHHHHHHHHTTTCCCE--E-----CSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEE
T ss_pred CCcEEEEEecCCchhhHHHHHHHHHHcCCCCc--c-----cCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEE
Confidence 455555444322 22455555555554221 1 2456777765 6776665554443445778999999988
Q ss_pred E
Q 027511 78 S 78 (222)
Q Consensus 78 a 78 (222)
+
T Consensus 96 ~ 96 (337)
T 3ip3_A 96 V 96 (337)
T ss_dssp E
T ss_pred E
Confidence 5
No 131
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=48.53 E-value=23 Score=28.81 Aligned_cols=77 Identities=14% Similarity=0.049 Sum_probs=46.5
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeC---CC----------ChhHHHHHHHhccEEEEcCCCccccHHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLG---AV----------PHAQVRSVLISGHIFLNSSLTEAFCIAILEAA 70 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g---~v----------~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAm 70 (222)
.+++.|+|.|..-..+.+.+.+.+ .+...+ .- ..+++.+++..+|+.+.++....---.+..++
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~---~~elvav~d~~~~~~~~~gv~~~~d~~~ll~~~DvViiatp~~~h~~~~~~al 79 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQP---DMDLVGIFSRRATLDTKTPVFDVADVDKHADDVDVLFLCMGSATDIPEQAPKF 79 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCS---SEEEEEEEESSSCCSSSSCEEEGGGGGGTTTTCSEEEECSCTTTHHHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHhcCC---CCEEEEEEcCCHHHhhcCCCceeCCHHHHhcCCCEEEEcCCcHHHHHHHHHHH
Confidence 578999998876655555444332 232221 10 02345555577899887765543333456788
Q ss_pred HhCCcEEEeCCCC
Q 027511 71 SCGLLTVSTRVGG 83 (222)
Q Consensus 71 a~G~PvVa~~~gg 83 (222)
..|++||...-.+
T Consensus 80 ~aG~~Vv~ekp~~ 92 (320)
T 1f06_A 80 AQFACTVDTYDNH 92 (320)
T ss_dssp TTTSEEECCCCCG
T ss_pred HCCCEEEECCCCc
Confidence 8999999876543
No 132
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=48.46 E-value=1.1e+02 Score=25.12 Aligned_cols=80 Identities=13% Similarity=0.095 Sum_probs=52.2
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh------------hHHHHHHHhccEEEE-cCCC-c---cccHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH------------AQVRSVLISGHIFLN-SSLT-E---AFCIAI 66 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~------------~~~~~ll~~adv~v~-~s~~-E---~~g~~i 66 (222)
+.++-|+|-|..-..+.+.+...|. +|.....-+. .++.+++..+|+++. .+.+ + -++-..
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 245 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAFGF--NVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFT 245 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC--EEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHH
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCC--EEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHH
Confidence 4578899999888888888877775 4665443211 256788999998764 3332 2 244556
Q ss_pred HHHHHhCCcEEEeCCCCcc
Q 027511 67 LEAASCGLLTVSTRVGGVP 85 (222)
Q Consensus 67 lEAma~G~PvVa~~~gg~~ 85 (222)
+..|.-|.-+|-+..|++.
T Consensus 246 l~~mk~gailIN~arg~~v 264 (347)
T 1mx3_A 246 VKQMRQGAFLVNTARGGLV 264 (347)
T ss_dssp HTTSCTTEEEEECSCTTSB
T ss_pred HhcCCCCCEEEECCCChHH
Confidence 6667667777766666543
No 133
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=48.42 E-value=54 Score=26.67 Aligned_cols=39 Identities=15% Similarity=-0.046 Sum_probs=26.2
Q ss_pred hHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++.. .|+++.++-...-.-.+.+|+..|++|++=
T Consensus 72 ~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~E 112 (340)
T 1zh8_A 72 DSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICE 112 (340)
T ss_dssp SCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCCcEEEe
Confidence 456777764 677666555443344566899999999873
No 134
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=48.31 E-value=39 Score=27.91 Aligned_cols=106 Identities=12% Similarity=0.118 Sum_probs=60.6
Q ss_pred eEEEEEcCCccHHHHHHHHHHc---CCCCcEE---EeCCCChhHHHHHHHhccEEEEcC---CCccccHHHHHHHHh---
Q 027511 5 VRFIVGGDGPKRVRLEEMREKH---SLQDRVE---MLGAVPHAQVRSVLISGHIFLNSS---LTEAFCIAILEAASC--- 72 (222)
Q Consensus 5 ~~lvi~G~g~~~~~l~~~~~~~---~l~~~V~---~~g~v~~~~~~~ll~~adv~v~~s---~~E~~g~~ilEAma~--- 72 (222)
.+++|++.|.......+.++.+ |+.-.|. ++-.++.+.+.+.+...+-+|..- ..-++|..+.++++-
T Consensus 217 ~dv~iia~Gs~~~~a~~Aa~~L~~~Gi~v~vv~~~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~Gg~g~~v~~~l~~~~~ 296 (341)
T 2ozl_B 217 THITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPA 296 (341)
T ss_dssp SSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEECCEEETCCHHHHHHHHHHHSCEEEECSSCSTTCHHHHHHHHHHHSTT
T ss_pred CCEEEEEeCHHHHHHHHHHHHHHhcCCCeEEEeeeeecCCCHHHHHHHHhcCCeEEEEecCcccCcHHHHHHHHHHhhhc
Confidence 3567888887777666665544 3332332 345567777888888776433221 235677777777765
Q ss_pred ----CCcEEEeCCCCccccccCCceE--EeCCCHHHHHHHHHHHHh
Q 027511 73 ----GLLTVSTRVGGVPEVLPDDMVV--LAEPDPGDMVLAIRKAIS 112 (222)
Q Consensus 73 ----G~PvVa~~~gg~~e~i~~~~~g--~~~~~~~~la~~i~~ll~ 112 (222)
..|+.. .|......+.+... ..-.|++.+++++.++++
T Consensus 297 ~~~l~~~v~~--ig~~d~~~~~g~~l~~~~g~~~~~I~~~i~~~l~ 340 (341)
T 2ozl_B 297 FNFLDAPAVR--VTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLN 340 (341)
T ss_dssp GGGCSSCCEE--ECCCSSCCCSSHHHHHTTSCCHHHHHHHHHHHHT
T ss_pred ccccCCCEEE--EecCCcCCCCcHHHHHHhCcCHHHHHHHHHHHhc
Confidence 345532 22222223322211 122488999999988764
No 135
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=48.14 E-value=57 Score=21.60 Aligned_cols=66 Identities=14% Similarity=0.029 Sum_probs=43.9
Q ss_pred CceEEEEEcCC-ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 3 VKVRFIVGGDG-PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 3 p~~~lvi~G~g-~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
.++.+++.|.- ..+.+++++++++|- + +...++ ...+-+|.......-+.++..|...|+|||..+
T Consensus 17 ~g~~i~isg~~~~~r~~l~~li~~~Gg--~--v~~~~s--------~~~THlI~~~~~~~~~~K~~~A~~~gi~IV~~~ 83 (107)
T 3l3e_A 17 HKVVVCVSKKLSKKQSELNGIAASLGA--D--YRRSFD--------ETVTHFIYQGRPNDTNREYKSVKERGVHIVSEH 83 (107)
T ss_dssp TTCEEEECGGGGGGHHHHHHHHHHTTC--E--EESSCC--------TTCCEEECCCCTTCCCHHHHHHHHTTCEEECHH
T ss_pred CCeEEEEeCCChHhHHHHHHHHHHcCC--E--Eecccc--------CCceEEEecCCCCCCCHHHHHHHHCCCeEecHH
Confidence 36778888843 467889999998863 2 345543 234445553333445688889999999999754
No 136
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=47.87 E-value=73 Score=26.81 Aligned_cols=81 Identities=12% Similarity=0.130 Sum_probs=57.7
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCC--------CChhHHHHHHHhccEEEE-cCCC-c-------cccHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGA--------VPHAQVRSVLISGHIFLN-SSLT-E-------AFCIAI 66 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~--------v~~~~~~~ll~~adv~v~-~s~~-E-------~~g~~i 66 (222)
+-++-|+|-|..-..+.+.++.+|. +|..... ....++.+++..||+++. .+.+ + -++-..
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~G~--~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~ 196 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEALGI--RTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETL 196 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTC--EEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHH
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCC--EEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHH
Confidence 4578899999888888888888875 4554431 233568899999999764 3322 2 345678
Q ss_pred HHHHHhCCcEEEeCCCCccc
Q 027511 67 LEAASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 67 lEAma~G~PvVa~~~gg~~e 86 (222)
+..|--|.-+|-+..|++.+
T Consensus 197 l~~mk~gailIN~aRG~vvd 216 (381)
T 3oet_A 197 IRRLKPGAILINACRGPVVD 216 (381)
T ss_dssp HHHSCTTEEEEECSCGGGBC
T ss_pred HhcCCCCcEEEECCCCcccC
Confidence 88888898888877777554
No 137
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=47.54 E-value=70 Score=25.90 Aligned_cols=40 Identities=18% Similarity=0.098 Sum_probs=28.0
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
.++.+++. ..|+++.++-...-.-.+.+|+..|++|++-.
T Consensus 55 ~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EK 96 (344)
T 3euw_A 55 ASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEK 96 (344)
T ss_dssp SSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECS
T ss_pred CCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCCcEEEEC
Confidence 45666777 67887766665554556678999999998643
No 138
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=47.21 E-value=75 Score=25.44 Aligned_cols=38 Identities=16% Similarity=0.077 Sum_probs=27.7
Q ss_pred hHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 41 AQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 41 ~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.++.+++.. .|+++.++-.....-.+.+++..|++|++
T Consensus 52 ~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ 91 (332)
T 2glx_A 52 TSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLC 91 (332)
T ss_dssp SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEE
Confidence 456677764 88887766655545566789999999986
No 139
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=46.34 E-value=66 Score=25.97 Aligned_cols=40 Identities=5% Similarity=0.045 Sum_probs=27.4
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
.++.+++. ..|+++.++-...-.-.+.+|+..|++|++=.
T Consensus 56 ~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~~GkhVl~EK 97 (334)
T 3ohs_X 56 GSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEK 97 (334)
T ss_dssp SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEES
T ss_pred CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEC
Confidence 45677777 47887665554444445668999999998743
No 140
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=46.33 E-value=86 Score=25.20 Aligned_cols=77 Identities=14% Similarity=0.061 Sum_probs=45.5
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEE---------------EeCCC-ChhHHHHHHH--hccEEEEcCCCccccH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVE---------------MLGAV-PHAQVRSVLI--SGHIFLNSSLTEAFCI 64 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~---------------~~g~v-~~~~~~~ll~--~adv~v~~s~~E~~g~ 64 (222)
..+++-|+|.|..-........+.+.- .+. -.|.. ...++.+++. ..|+++.++-...-.-
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~-~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 82 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNG-EVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYK 82 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSE-EEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 357899999886654443333332210 011 01211 2356788888 6788776665554455
Q ss_pred HHHHHHHhCCcEEEeC
Q 027511 65 AILEAASCGLLTVSTR 80 (222)
Q Consensus 65 ~ilEAma~G~PvVa~~ 80 (222)
.+.+|+..|++|++-.
T Consensus 83 ~~~~al~aGk~Vl~EK 98 (329)
T 3evn_A 83 VAKAALLAGKHVLVEK 98 (329)
T ss_dssp HHHHHHHTTCEEEEES
T ss_pred HHHHHHHCCCeEEEcc
Confidence 6678999999998743
No 141
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=45.53 E-value=57 Score=23.85 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=61.6
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhc----c-EEEEcCCCccccHHHHHHHH-hC-CcEEE---eCCCCccc
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISG----H-IFLNSSLTEAFCIAILEAAS-CG-LLTVS---TRVGGVPE 86 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~a----d-v~v~~s~~E~~g~~ilEAma-~G-~PvVa---~~~gg~~e 86 (222)
..+++.++++|+ .+.|.-+=...++-+.+..+ | +.++|.-+.+.++++..|++ .+ +|+|= ||+-. +|
T Consensus 38 ~~l~~~a~~~g~--~v~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~THtSvAlrDAl~~v~~~P~VEVHiSNi~a-RE 114 (156)
T 1gtz_A 38 ALCVKAAAAHGG--TVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPVVEVHISNIHQ-RE 114 (156)
T ss_dssp HHHHHHHHTTTC--CEEEEECSCHHHHHHHHHHHHHHCSEEEEECTTHHHHCHHHHHHHHTSTTCCEEEEESSCGGG-SC
T ss_pred HHHHHHHHHcCC--EEEEEeeCCHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhcCCCCEEEEEecCccc-cc
Confidence 445555666666 47777776667777777665 3 57899999999999999985 46 79993 33322 23
Q ss_pred ------cccCCceEEeCC-CHHHHHHHHHHHHh
Q 027511 87 ------VLPDDMVVLAEP-DPGDMVLAIRKAIS 112 (222)
Q Consensus 87 ------~i~~~~~g~~~~-~~~~la~~i~~ll~ 112 (222)
++.+-..|.... ..+...-++..+++
T Consensus 115 ~FRh~S~~s~~a~GvI~G~G~~gY~lAl~a~~~ 147 (156)
T 1gtz_A 115 PFRHHSYVSQRADGVVAGCGVQGYVFGVERIAA 147 (156)
T ss_dssp GGGSCCSGGGTCSEEEESSTTHHHHHHHHHHHH
T ss_pred ccccccccCcceeEEEEecCHHHHHHHHHHHHH
Confidence 344445666665 56666666666554
No 142
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=44.79 E-value=1.1e+02 Score=25.54 Aligned_cols=80 Identities=14% Similarity=0.119 Sum_probs=55.5
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC-----------hhHHHHHHHhccEEEE-cCCC-c---cccHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP-----------HAQVRSVLISGHIFLN-SSLT-E---AFCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~-----------~~~~~~ll~~adv~v~-~s~~-E---~~g~~il 67 (222)
+-++-|+|-|..-..+.+.++.+|. +|.....-. ..++.+++..||+++. .+.+ + -++-..+
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l 253 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGFRA--RIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAF 253 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTSCC--EEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHH
T ss_pred CCEEEEecCCcccHHHHHhhhhCCC--EEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHH
Confidence 4578999999888888888877765 466554321 1246789999999764 2222 2 3556778
Q ss_pred HHHHhCCcEEEeCCCCcc
Q 027511 68 EAASCGLLTVSTRVGGVP 85 (222)
Q Consensus 68 EAma~G~PvVa~~~gg~~ 85 (222)
..|--|.-+|-+..|++.
T Consensus 254 ~~mk~gailIN~aRG~~v 271 (365)
T 4hy3_A 254 SSMRRGAAFILLSRADVV 271 (365)
T ss_dssp HTSCTTCEEEECSCGGGS
T ss_pred hcCCCCcEEEECcCCchh
Confidence 888888888877777654
No 143
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=44.73 E-value=1.1e+02 Score=25.04 Aligned_cols=81 Identities=14% Similarity=0.150 Sum_probs=56.2
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh----------hHHHHHHHhccEEEE-cCC----CccccHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH----------AQVRSVLISGHIFLN-SSL----TEAFCIAILE 68 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~----------~~~~~ll~~adv~v~-~s~----~E~~g~~ilE 68 (222)
+.++-|+|-|..-..+.+.++..|. +|.....-+. .++.+++..||+++. .+. ..-++-..+.
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~ 218 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAFGM--KVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERIS 218 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHHCcC--EEEEECCCcchhhHhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHh
Confidence 4578899999888888888888775 4655443322 136789999999764 332 2235667888
Q ss_pred HHHhCCcEEEeCCCCccc
Q 027511 69 AASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 69 Ama~G~PvVa~~~gg~~e 86 (222)
.|--|.-+|-+..|++.+
T Consensus 219 ~mk~gailIN~aRg~~vd 236 (334)
T 2pi1_A 219 LMKDGVYLINTARGKVVD 236 (334)
T ss_dssp HSCTTEEEEECSCGGGBC
T ss_pred hCCCCcEEEECCCCcccC
Confidence 888888888777776543
No 144
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=44.53 E-value=67 Score=26.67 Aligned_cols=82 Identities=9% Similarity=0.015 Sum_probs=46.6
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEE-----------eC---CCCh-hHHHHHHHhc-----------------
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEM-----------LG---AVPH-AQVRSVLISG----------------- 50 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~-----------~g---~v~~-~~~~~ll~~a----------------- 50 (222)
..+++-|+|-|..-..+-+...+......+.+ .. .++. ++..+++...
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~ 82 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTS 82 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTC
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhhhc
Confidence 45889999988776666665555421011211 10 1111 3455555543
Q ss_pred ---cEEEEcC-CCccccHHHHHHHHhCCcEEEeCCCCcc
Q 027511 51 ---HIFLNSS-LTEAFCIAILEAASCGLLTVSTRVGGVP 85 (222)
Q Consensus 51 ---dv~v~~s-~~E~~g~~ilEAma~G~PvVa~~~gg~~ 85 (222)
|+++-++ ..++.... .+|+..|+.||++|-..+.
T Consensus 83 ~~~DvVV~~t~~~~~a~~~-~~AL~aGkhVVtaNkkpla 120 (358)
T 1ebf_A 83 PKPVILVDNTSSAYIAGFY-TKFVENGISIATPNKKAFS 120 (358)
T ss_dssp SSCEEEEECSCCHHHHTTH-HHHHHTTCEEECCCCGGGS
T ss_pred cCCcEEEEcCCChHHHHHH-HHHHHCCCeEEecCccccc
Confidence 5665443 34444444 5999999999998865443
No 145
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=44.49 E-value=53 Score=28.63 Aligned_cols=75 Identities=8% Similarity=0.142 Sum_probs=50.7
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCC-CcEEEeCC---C--C------------------------hhHHHHHHHhccE
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQ-DRVEMLGA---V--P------------------------HAQVRSVLISGHI 52 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~-~~V~~~g~---v--~------------------------~~~~~~ll~~adv 52 (222)
.+.++++.|.|.----+-+++...|+. .+|.+... + . ...+.+.++.+|+
T Consensus 218 ~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adV 297 (487)
T 3nv9_A 218 HECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADV 297 (487)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSE
T ss_pred hhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCE
Confidence 477899999887776677776677774 34554321 1 1 1135577788899
Q ss_pred EEEcCCC--ccccHHHHHHHHhCCcEEE
Q 027511 53 FLNSSLT--EAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 53 ~v~~s~~--E~~g~~ilEAma~G~PvVa 78 (222)
||-.|.. ..|.--++++|+ ..|+|-
T Consensus 298 lIG~S~~~pg~ft~e~V~~Ma-~~PIIF 324 (487)
T 3nv9_A 298 LISLSTPGPGVVKAEWIKSMG-EKPIVF 324 (487)
T ss_dssp EEECCCSSCCCCCHHHHHTSC-SSCEEE
T ss_pred EEEecccCCCCCCHHHHHhhc-CCCEEE
Confidence 9998854 577777888885 567773
No 146
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=44.29 E-value=40 Score=27.75 Aligned_cols=40 Identities=15% Similarity=-0.007 Sum_probs=28.2
Q ss_pred hhHHHHHHHhc--cEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 40 HAQVRSVLISG--HIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 40 ~~~~~~ll~~a--dv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
..++.+++... |+++.++-...-.-.+.+|+..|++|++-
T Consensus 57 ~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~E 98 (359)
T 3m2t_A 57 LDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVE 98 (359)
T ss_dssp ESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEE
Confidence 35678888865 77666555444445567899999999863
No 147
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=44.29 E-value=75 Score=26.10 Aligned_cols=38 Identities=13% Similarity=0.023 Sum_probs=26.7
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.++.+++. ..|+++.++-...-.-.+.+|+..|++|++
T Consensus 57 ~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~al~aGk~Vl~ 96 (364)
T 3e82_A 57 ASPEAAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVV 96 (364)
T ss_dssp SCHHHHHTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEE
Confidence 46777887 568766655544444456789999999986
No 148
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=44.16 E-value=48 Score=27.14 Aligned_cols=38 Identities=11% Similarity=0.076 Sum_probs=25.6
Q ss_pred hHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 41 AQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 41 ~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.++.+++.. .|+++.++-...-.-.++.|+..|++|++
T Consensus 84 ~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~aGkhVl~ 123 (393)
T 4fb5_A 84 ADWRALIADPEVDVVSVTTPNQFHAEMAIAALEAGKHVWC 123 (393)
T ss_dssp SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHhcCCCCcEEEECCChHHHHHHHHHHHhcCCeEEE
Confidence 467778875 46665554444334456799999999886
No 149
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=44.00 E-value=66 Score=25.79 Aligned_cols=39 Identities=15% Similarity=0.041 Sum_probs=28.1
Q ss_pred hHHHHHH-HhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVL-ISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll-~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++ ...|+++.++-.....-.+.+|+..|++|++-
T Consensus 53 ~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~gk~V~~E 92 (325)
T 2ho3_A 53 DQLEVFFKSSFDLVYIASPNSLHFAQAKAALSAGKHVILE 92 (325)
T ss_dssp SCHHHHHTSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHhCCCCCEEEEeCChHHHHHHHHHHHHcCCcEEEe
Confidence 3456677 56788877766555555667899999999874
No 150
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=43.88 E-value=77 Score=26.41 Aligned_cols=55 Identities=11% Similarity=0.024 Sum_probs=33.4
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
+..++.+++++.+. . ..++.+++.. .|+++.++-...-.-.+++|+..|++|++=
T Consensus 70 ~~a~~~a~~~~~~~---~-----y~d~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~E 126 (412)
T 4gqa_A 70 AMAERHAAKLGAEK---A-----YGDWRELVNDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCE 126 (412)
T ss_dssp HHHHHHHHHHTCSE---E-----ESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCe---E-----ECCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcCCCeEee
Confidence 44455555555421 1 2457777875 466655554444444667999999999874
No 151
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=43.76 E-value=15 Score=29.29 Aligned_cols=80 Identities=11% Similarity=0.047 Sum_probs=52.3
Q ss_pred CCceEEEEEcCCccHHHHHHHHHHcCCCCcEEEe-------CCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCC
Q 027511 2 RVKVRFIVGGDGPKRVRLEEMREKHSLQDRVEML-------GAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGL 74 (222)
Q Consensus 2 ~p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~-------g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~ 74 (222)
|...++.++|.|..-..+.+. . ++.- +-.. |-..-.++.+++..+|+.|.+...+..---+...+..|+
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~--~-~leL-v~v~~~k~gelgv~a~~d~d~lla~pD~VVe~A~~~av~e~~~~iL~aG~ 85 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL--G-NFEK-IYAYDRISKDIPGVVRLDEFQVPSDVSTVVECASPEAVKEYSLQILKNPV 85 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH--S-CCSE-EEEECSSCCCCSSSEECSSCCCCTTCCEEEECSCHHHHHHHHHHHTTSSS
T ss_pred cccceEEEECcCHHHHHHHhc--C-CcEE-EEEEeccccccCceeeCCHHHHhhCCCEEEECCCHHHHHHHHHHHHHCCC
Confidence 457899999999776665554 1 2211 0000 222235566667788999998876654444566778999
Q ss_pred cEEEeCCCCcc
Q 027511 75 LTVSTRVGGVP 85 (222)
Q Consensus 75 PvVa~~~gg~~ 85 (222)
.||++..|.+.
T Consensus 86 dvv~~S~gaLa 96 (253)
T 1j5p_A 86 NYIIISTSAFA 96 (253)
T ss_dssp EEEECCGGGGG
T ss_pred CEEEcChhhhc
Confidence 99999888654
No 152
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=43.52 E-value=40 Score=27.05 Aligned_cols=39 Identities=15% Similarity=0.125 Sum_probs=26.9
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++. ..|+.+.++-.....-.+.+|+..|++|++-
T Consensus 59 ~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~e 99 (315)
T 3c1a_A 59 SDWRSVVSAPEVEAVIIATPPATHAEITLAAIASGKAVLVE 99 (315)
T ss_dssp SSTHHHHTCTTCCEEEEESCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEc
Confidence 34567775 6788776655544455566889999998864
No 153
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=43.49 E-value=50 Score=27.17 Aligned_cols=39 Identities=10% Similarity=0.105 Sum_probs=26.6
Q ss_pred hHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++.. .|+++.++-...-.-.+..|+..|++|++=
T Consensus 78 ~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~E 118 (361)
T 3u3x_A 78 ATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVD 118 (361)
T ss_dssp SCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEe
Confidence 566777765 677666555444444567899999999863
No 154
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=43.20 E-value=38 Score=28.79 Aligned_cols=38 Identities=5% Similarity=-0.095 Sum_probs=26.3
Q ss_pred HHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 42 QVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 42 ~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
++.+++. ..|+++.++-.....-.+.+|+..|++|++-
T Consensus 141 ~~~~ll~~~~vD~V~iatp~~~h~~~~~~al~aGk~Vl~E 180 (433)
T 1h6d_A 141 NFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCE 180 (433)
T ss_dssp SGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CHHHHhcCCCCCEEEEcCCchhHHHHHHHHHHCCCcEEEc
Confidence 3445565 5688776666555555667899999999873
No 155
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=43.14 E-value=1.2e+02 Score=24.38 Aligned_cols=82 Identities=9% Similarity=0.064 Sum_probs=54.3
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh-----------hHHHHHHHhccEEEEc-CC---C-ccccHHH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH-----------AQVRSVLISGHIFLNS-SL---T-EAFCIAI 66 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~-----------~~~~~ll~~adv~v~~-s~---~-E~~g~~i 66 (222)
++-++-|+|-|..-..+-+.+...|. +|.....-+. .++.+++..+|+++.. +. + .-++-..
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~ 218 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIANAMGM--KVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQ 218 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHH
Confidence 35578899999888888888877774 4655543321 1466788999997653 22 2 2244567
Q ss_pred HHHHHhCCcEEEeCCCCccc
Q 027511 67 LEAASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 67 lEAma~G~PvVa~~~gg~~e 86 (222)
++.|.-|.-+|.+..|++.+
T Consensus 219 l~~mk~ga~lIn~arg~~vd 238 (313)
T 2ekl_A 219 FELMKDNVIIVNTSRAVAVN 238 (313)
T ss_dssp HHHSCTTEEEEESSCGGGBC
T ss_pred HhcCCCCCEEEECCCCcccC
Confidence 78888787777666665443
No 156
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=43.11 E-value=79 Score=25.89 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=26.9
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++. ..|+++.++-...-.-.+..|+..|++|++-
T Consensus 55 ~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~E 95 (359)
T 3e18_A 55 ESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCE 95 (359)
T ss_dssp SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEee
Confidence 45677777 5688766555444444566899999999863
No 157
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=43.05 E-value=96 Score=22.71 Aligned_cols=36 Identities=3% Similarity=-0.200 Sum_probs=22.9
Q ss_pred HHHHhccEEEE--cCC--CccccHHHHHHHHhCCcEEEeC
Q 027511 45 SVLISGHIFLN--SSL--TEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 45 ~ll~~adv~v~--~s~--~E~~g~~ilEAma~G~PvVa~~ 80 (222)
+.+++||++|. ... ..+-+.-+-=|.+.|+||++-.
T Consensus 77 ~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 77 TGISNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 45788999875 221 2333333344779999999874
No 158
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=42.96 E-value=49 Score=26.54 Aligned_cols=72 Identities=19% Similarity=0.114 Sum_probs=42.0
Q ss_pred CCceEEEEEcC-CccHHHHHHHHHHcCCCCcEEE-----------eCCCChhHHHHHHH--hccEEEEcCCCccccHHHH
Q 027511 2 RVKVRFIVGGD-GPKRVRLEEMREKHSLQDRVEM-----------LGAVPHAQVRSVLI--SGHIFLNSSLTEAFCIAIL 67 (222)
Q Consensus 2 ~p~~~lvi~G~-g~~~~~l~~~~~~~~l~~~V~~-----------~g~v~~~~~~~ll~--~adv~v~~s~~E~~g~~il 67 (222)
.++.++.++|- |..-..+-+...+++.. +.+ .|.--...+.++.. ..|+.+...-.+.-.-.+.
T Consensus 5 ~~~~~VaVvGasG~~G~~~~~~l~~~g~~--~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~~~ 82 (288)
T 1oi7_A 5 NRETRVLVQGITGREGQFHTKQMLTYGTK--IVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAAL 82 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCE--EEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHcCCe--EEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCHHHHHHHHH
Confidence 35678999995 65444444444444542 221 11111234666776 7888877666566666677
Q ss_pred HHHHhCCc
Q 027511 68 EAASCGLL 75 (222)
Q Consensus 68 EAma~G~P 75 (222)
|+...|++
T Consensus 83 ea~~~Gi~ 90 (288)
T 1oi7_A 83 EAAHAGIP 90 (288)
T ss_dssp HHHHTTCS
T ss_pred HHHHCCCC
Confidence 77777777
No 159
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=42.75 E-value=51 Score=25.22 Aligned_cols=76 Identities=13% Similarity=0.088 Sum_probs=47.0
Q ss_pred EEEEEcCCccHHHHHHHHHHcCCCCcE-EEeCCCC-----hhHHHHHH-HhccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 6 RFIVGGDGPKRVRLEEMREKHSLQDRV-EMLGAVP-----HAQVRSVL-ISGHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 6 ~lvi~G~g~~~~~l~~~~~~~~l~~~V-~~~g~v~-----~~~~~~ll-~~adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
++-|+|-|..-..+.+...+.+. .+ .....-+ .+++.+++ ..+|+.+..+-....--.+.+++..|++||.
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~--~lv~v~d~~~~~~~~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~~~l~~G~~vv~ 79 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGF--EIAAILDVRGEHEKMVRGIDEFLQREMDVAVEAASQQAVKDYAEKILKAGIDLIV 79 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC--EEEEEECSSCCCTTEESSHHHHTTSCCSEEEECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCHHHHHHHHHHhcCCC--EEEEEEecCcchhhhcCCHHHHhcCCCCEEEECCCHHHHHHHHHHHHHCCCcEEE
Confidence 67788988765554444334333 23 2222211 23567777 5889988776655444456788999999998
Q ss_pred eCCCC
Q 027511 79 TRVGG 83 (222)
Q Consensus 79 ~~~gg 83 (222)
...+.
T Consensus 80 ~~~~~ 84 (236)
T 2dc1_A 80 LSTGA 84 (236)
T ss_dssp SCGGG
T ss_pred ECccc
Confidence 76543
No 160
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=42.66 E-value=1.1e+02 Score=24.94 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=26.2
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++. ..|+.+.++-...-.-.+.+|+..|++|++-
T Consensus 65 ~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~E 105 (354)
T 3q2i_A 65 ASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTE 105 (354)
T ss_dssp SCHHHHHHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEe
Confidence 34566776 5687766555444444567889999998863
No 161
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=42.57 E-value=1.3e+02 Score=24.15 Aligned_cols=80 Identities=11% Similarity=0.123 Sum_probs=53.7
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh-----------hHHHHHHHhccEEEEc-CCC---c-cccHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH-----------AQVRSVLISGHIFLNS-SLT---E-AFCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~-----------~~~~~ll~~adv~v~~-s~~---E-~~g~~il 67 (222)
+-++-|+|-|..-..+.+.+...|. +|.....-+. .++.+++..+|+++.. +.+ + -++-..+
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l 219 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANALGM--NILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERL 219 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHH
T ss_pred CceEEEEccCHHHHHHHHHHHHCCC--EEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHH
Confidence 4578899999888888888887774 4655543321 1466788999997653 322 2 2445677
Q ss_pred HHHHhCCcEEEeCCCCcc
Q 027511 68 EAASCGLLTVSTRVGGVP 85 (222)
Q Consensus 68 EAma~G~PvVa~~~gg~~ 85 (222)
..|.-|.-+|-+..|++.
T Consensus 220 ~~mk~ga~lin~arg~~v 237 (307)
T 1wwk_A 220 KLMKKTAILINTSRGPVV 237 (307)
T ss_dssp HHSCTTCEEEECSCGGGB
T ss_pred hcCCCCeEEEECCCCccc
Confidence 888888888866666543
No 162
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=42.42 E-value=1e+02 Score=25.80 Aligned_cols=69 Identities=20% Similarity=0.159 Sum_probs=41.4
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEe------------------C-CCChhHHHHHHHhccEEEEcCCCcccc
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEML------------------G-AVPHAQVRSVLISGHIFLNSSLTEAFC 63 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~------------------g-~v~~~~~~~ll~~adv~v~~s~~E~~g 63 (222)
|..++.|+|+|.....+.+.++++|+. |..+ + +.+.+.+.++...+|+.+. ..|..+
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~~lG~~--v~~~d~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~--e~e~~~ 98 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESANRLNIQ--VNVLDADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA--EIEHVD 98 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCE--EEEEESTTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE--SSSCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE--EEEEECCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE--CCCCCC
Confidence 456899999998777888888888863 2222 1 2233456666666776543 244445
Q ss_pred HHHHHHHHhCCc
Q 027511 64 IAILEAASCGLL 75 (222)
Q Consensus 64 ~~ilEAma~G~P 75 (222)
..+++.+..|+|
T Consensus 99 ~~~l~~l~~g~~ 110 (403)
T 3k5i_A 99 TYALEEVASEVK 110 (403)
T ss_dssp HHHHHHHTTTSE
T ss_pred HHHHHHHHcCCc
Confidence 555555544554
No 163
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=42.14 E-value=1e+02 Score=25.79 Aligned_cols=71 Identities=10% Similarity=0.142 Sum_probs=40.3
Q ss_pred EEEEEcCCccHHHHHHHHHHcCCC--CcEEE--eCCCChhHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 6 RFIVGGDGPKRVRLEEMREKHSLQ--DRVEM--LGAVPHAQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 6 ~lvi~G~g~~~~~l~~~~~~~~l~--~~V~~--~g~v~~~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
++++++.. .+.+++++++++.. .++.. ...-+.+++.++++. .|++++..-...-...+-.++..|+.+|-
T Consensus 29 ~V~v~~r~--~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD 105 (405)
T 4ina_A 29 HITLASRT--LSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLD 105 (405)
T ss_dssp EEEEEESC--HHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEE
T ss_pred EEEEEECC--HHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEE
Confidence 55666543 34444444443210 12322 233345788899988 89999875432222334566789999994
No 164
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=42.05 E-value=82 Score=25.76 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=53.5
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC-h-----------hHHHHHHHhccEEEE-cCCC-c---cccHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP-H-----------AQVRSVLISGHIFLN-SSLT-E---AFCIAI 66 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~-~-----------~~~~~ll~~adv~v~-~s~~-E---~~g~~i 66 (222)
+-++-|+|-|..-..+.+.+..+|. +|.....-+ . .++.++++.+|+++. .+.+ + -++-..
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 222 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGWGA--TLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAEL 222 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTSCC--EEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCC--EEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHH
Confidence 4578899999888888777776665 466555432 1 246788999999764 2322 2 345567
Q ss_pred HHHHHhCCcEEEeCCCCcc
Q 027511 67 LEAASCGLLTVSTRVGGVP 85 (222)
Q Consensus 67 lEAma~G~PvVa~~~gg~~ 85 (222)
+..|--|.-+|-+..|++.
T Consensus 223 l~~mk~gailIN~arg~~v 241 (330)
T 4e5n_A 223 LALVRPGALLVNPCRGSVV 241 (330)
T ss_dssp HTTSCTTEEEEECSCGGGB
T ss_pred HhhCCCCcEEEECCCCchh
Confidence 7777778778877666654
No 165
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=41.83 E-value=18 Score=27.87 Aligned_cols=63 Identities=13% Similarity=-0.007 Sum_probs=39.4
Q ss_pred ceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 4 KVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 4 ~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
++++.+-|-.+ .+..+.++++++|- . +... . ..+.-+|.+... -..+.+.|++.|+|||..++
T Consensus 16 ~~~i~~SG~~~~~~~~l~~~i~~lGg--~--v~~~-----~----~~~THLI~~~~~--rT~K~l~A~~~g~~IVs~~W 79 (219)
T 3sqd_A 16 TPFVLFTGFEPVQVQQYIKKLYILGG--E--VAES-----A----QKCTHLIASKVT--RTVKFLTAISVVKHIVTPEW 79 (219)
T ss_dssp CCEEEECSCCHHHHHHHHHHHHHTTC--E--ECSS-----G----GGCSEEECSSCC--CCHHHHHHTTTCSEEECHHH
T ss_pred CeEEEEeCCChHHHHHHHHHHHHCCC--E--EeCC-----C----CCceEEEECCCC--CCHHHHHHHHcCCCEecHHH
Confidence 45666667322 34567788888763 2 2222 1 456666665421 22689999999999998764
No 166
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=41.47 E-value=93 Score=25.28 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=27.0
Q ss_pred hHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 41 AQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 41 ~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.++.+++.. .|+++.++-...-.-.+..|+..|++|++
T Consensus 57 ~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhV~~ 96 (352)
T 3kux_A 57 SDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVV 96 (352)
T ss_dssp SCHHHHHHCSSCCEEEECSCTTTHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEE
Confidence 567888876 67766655544434456789999999986
No 167
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=40.72 E-value=81 Score=21.17 Aligned_cols=109 Identities=12% Similarity=0.088 Sum_probs=67.0
Q ss_pred CceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEcC-CCccccHHHHHHHHh-----C
Q 027511 3 VKVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSS-LTEAFCIAILEAASC-----G 73 (222)
Q Consensus 3 p~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~s-~~E~~g~~ilEAma~-----G 73 (222)
...+++|+.+.+ .+..+....++.+....|..... .++....+.. .|+++.-. ..+.-|..+++.+.. +
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~--~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~ 81 (144)
T 3kht_A 4 RSKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDN--GAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQH 81 (144)
T ss_dssp -CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESS--HHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTT
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECC--HHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccC
Confidence 456888888644 44667777777765433554444 5666666665 46666543 345567888887764 5
Q ss_pred CcEEEeCCCCcc----ccccCCceEE--eCC-CHHHHHHHHHHHHhc
Q 027511 74 LLTVSTRVGGVP----EVLPDDMVVL--AEP-DPGDMVLAIRKAISL 113 (222)
Q Consensus 74 ~PvVa~~~gg~~----e~i~~~~~g~--~~~-~~~~la~~i~~ll~~ 113 (222)
+|+|.-...... +.+..|..++ .+- +.+++.++|..+++.
T Consensus 82 ~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 82 TPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFSY 128 (144)
T ss_dssp CCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHHHHHHHH
Confidence 788753332222 2334454443 334 789999999988875
No 168
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=40.41 E-value=46 Score=27.18 Aligned_cols=37 Identities=8% Similarity=0.030 Sum_probs=25.2
Q ss_pred HHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 42 QVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 42 ~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
++.+++.. .|+++.++-...-.-.+..|+..|++|++
T Consensus 56 ~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~ 94 (349)
T 3i23_A 56 DLNELLTDPEIELITICTPAHTHYDLAKQAILAGKSVIV 94 (349)
T ss_dssp CTHHHHSCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHcCCEEEE
Confidence 45566665 67776655544444456689999999986
No 169
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=40.28 E-value=67 Score=21.71 Aligned_cols=74 Identities=9% Similarity=0.094 Sum_probs=42.4
Q ss_pred ceEEEEE-cCCccH----HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHH--hCCcE
Q 027511 4 KVRFIVG-GDGPKR----VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAAS--CGLLT 76 (222)
Q Consensus 4 ~~~lvi~-G~g~~~----~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma--~G~Pv 76 (222)
..+++++ +.|-.. ..+++.+++.+++ +.... .+..+....+...|+++..+-.... ..=++..+ .|+||
T Consensus 6 ~mkIlL~C~aGmSTsllv~km~~~a~~~gi~--v~i~a-~~~~~~~~~~~~~DvvLLgPQV~y~-~~~ik~~~~~~~ipV 81 (108)
T 3nbm_A 6 ELKVLVLCAGSGTSAQLANAINEGANLTEVR--VIANS-GAYGAHYDIMGVYDLIILAPQVRSY-YREMKVDAERLGIQI 81 (108)
T ss_dssp CEEEEEEESSSSHHHHHHHHHHHHHHHHTCS--EEEEE-EETTSCTTTGGGCSEEEECGGGGGG-HHHHHHHHTTTTCEE
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCc--eEEEE-cchHHHHhhccCCCEEEEChHHHHH-HHHHHHHhhhcCCcE
Confidence 4454444 555433 5666778888875 44422 2224456667889999887654322 22234333 48998
Q ss_pred EEeCC
Q 027511 77 VSTRV 81 (222)
Q Consensus 77 Va~~~ 81 (222)
..-+.
T Consensus 82 ~vI~~ 86 (108)
T 3nbm_A 82 VATRG 86 (108)
T ss_dssp EECCH
T ss_pred EEeCH
Confidence 87553
No 170
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=40.10 E-value=73 Score=25.40 Aligned_cols=77 Identities=10% Similarity=0.060 Sum_probs=48.2
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC---------------hhHHHHHHHhccEEEEcCCCccccHHHH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP---------------HAQVRSVLISGHIFLNSSLTEAFCIAIL 67 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~---------------~~~~~~ll~~adv~v~~s~~E~~g~~il 67 (222)
++-++.|+|.|..-..+.+.+...|. +|.....-+ .+++.+++..+|+++...-..-++-..+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~--~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~~ 233 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGA--NVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMILNQTVL 233 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCCBCHHHH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhhhCHHHH
Confidence 35578899988877777777777764 465544321 1346667788898877554444444555
Q ss_pred HHHHhCCcEEEeCC
Q 027511 68 EAASCGLLTVSTRV 81 (222)
Q Consensus 68 EAma~G~PvVa~~~ 81 (222)
+.|.-|.-+|-.-.
T Consensus 234 ~~mk~g~~lin~a~ 247 (300)
T 2rir_A 234 SSMTPKTLILDLAS 247 (300)
T ss_dssp TTSCTTCEEEECSS
T ss_pred HhCCCCCEEEEEeC
Confidence 66666655554443
No 171
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=39.56 E-value=24 Score=24.09 Aligned_cols=53 Identities=11% Similarity=0.228 Sum_probs=31.3
Q ss_pred eEEEE-EcCCcc-----HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCc
Q 027511 5 VRFIV-GGDGPK-----RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE 60 (222)
Q Consensus 5 ~~lvi-~G~g~~-----~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E 60 (222)
.++++ +|.|-. ...+++.+++.++...|.-.+. .++...+..+|+++.+....
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~---~~~~~~~~~~DlIist~~l~ 80 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRV---NEIETYMDGVHLICTTARVD 80 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECT---TTTTTSTTSCSEEEESSCCC
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecH---HHHhhccCCCCEEEECCccc
Confidence 34444 455533 2566677777777644444433 33434456799999877654
No 172
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=39.53 E-value=77 Score=23.74 Aligned_cols=68 Identities=12% Similarity=0.183 Sum_probs=42.2
Q ss_pred hhHHHHHHHhccEEEEcCCCccccH--HHHHHHH------hCCcEEEeCCCCccc-cc-------cCC-------ceEEe
Q 027511 40 HAQVRSVLISGHIFLNSSLTEAFCI--AILEAAS------CGLLTVSTRVGGVPE-VL-------PDD-------MVVLA 96 (222)
Q Consensus 40 ~~~~~~ll~~adv~v~~s~~E~~g~--~ilEAma------~G~PvVa~~~gg~~e-~i-------~~~-------~~g~~ 96 (222)
++...-+...||.+|..+- ++|+ -++|++. .++||+.-+..|+-+ ++ .++ .....
T Consensus 88 ~~Rk~~~~~~sda~IvlPG--G~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~~~~~~ 165 (191)
T 1t35_A 88 HERKAKMSELADGFISMPG--GFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHS 165 (191)
T ss_dssp HHHHHHHHHHCSEEEECSC--CHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHHHHEEE
T ss_pred HHHHHHHHHHCCEEEEeCC--CccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHcCeEEE
Confidence 3445566678999876443 3443 4678885 789999988754422 21 222 12345
Q ss_pred CCCHHHHHHHHHH
Q 027511 97 EPDPGDMVLAIRK 109 (222)
Q Consensus 97 ~~~~~~la~~i~~ 109 (222)
.+|++++.+.|.+
T Consensus 166 ~~~~~e~~~~l~~ 178 (191)
T 1t35_A 166 SSRPDELIEQMQN 178 (191)
T ss_dssp ESSHHHHHHHHHT
T ss_pred eCCHHHHHHHHHH
Confidence 6678888877764
No 173
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=39.50 E-value=31 Score=27.56 Aligned_cols=39 Identities=10% Similarity=-0.039 Sum_probs=27.3
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++. ..|+++.++-...-.-.+.+|+..|++|++=
T Consensus 55 ~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~E 95 (294)
T 1lc0_A 55 ISLEDALRSQEIDVAYICSESSSHEDYIRQFLQAGKHVLVE 95 (294)
T ss_dssp CCHHHHHHCSSEEEEEECSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHhcCCCCCEEEEeCCcHhHHHHHHHHHHCCCcEEEe
Confidence 56888887 4677666555443344556899999999973
No 174
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=39.38 E-value=47 Score=27.21 Aligned_cols=38 Identities=8% Similarity=0.003 Sum_probs=25.5
Q ss_pred HHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCcEEEeC
Q 027511 42 QVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 42 ~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~PvVa~~ 80 (222)
+..+++...|+.+.++- ..++..+ ..++..|++||.+.
T Consensus 72 d~~~l~~~vDvV~~aTp~~~h~~~a-~~~l~aGk~Vi~sa 110 (334)
T 2czc_A 72 TLNDLLEKVDIIVDATPGGIGAKNK-PLYEKAGVKAIFQG 110 (334)
T ss_dssp BHHHHHTTCSEEEECCSTTHHHHHH-HHHHHHTCEEEECT
T ss_pred cHHHhccCCCEEEECCCccccHHHH-HHHHHcCCceEeec
Confidence 56666778898776544 3334444 37888999999653
No 175
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=39.35 E-value=1.3e+02 Score=25.33 Aligned_cols=32 Identities=16% Similarity=-0.041 Sum_probs=22.5
Q ss_pred ccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 50 GHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 50 adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
.|++|.......--...++|+..|+.|+..|-
T Consensus 94 iDvVV~ai~G~aGl~ptlaAi~aGK~VvlANK 125 (388)
T 1r0k_A 94 ADWTMAAIIGCAGLKATLAAIRKGKTVALANK 125 (388)
T ss_dssp CSEEEECCCSGGGHHHHHHHHHTTSEEEECCS
T ss_pred CCEEEEeCCCHHHHHHHHHHHHCCCEEEEeCc
Confidence 58888776543322344788999999999864
No 176
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=39.05 E-value=1.5e+02 Score=24.14 Aligned_cols=80 Identities=14% Similarity=0.104 Sum_probs=54.1
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC--------hhHHHHHHHhccEEEEc-CCC----ccccHHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP--------HAQVRSVLISGHIFLNS-SLT----EAFCIAILEAA 70 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~--------~~~~~~ll~~adv~v~~-s~~----E~~g~~ilEAm 70 (222)
..++-|+|-|..-..+.+.+...|. +|.....-+ ..++.++++.+|+++.. +.+ .-++-..+..|
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~--~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~m 241 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDC--PISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDAL 241 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTC--CEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--EEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcC
Confidence 3468899999888888888887775 465544321 23678899999997653 222 22344677888
Q ss_pred HhCCcEEEeCCCCcc
Q 027511 71 SCGLLTVSTRVGGVP 85 (222)
Q Consensus 71 a~G~PvVa~~~gg~~ 85 (222)
.-|..+|.+..|+..
T Consensus 242 k~gailIn~srG~~v 256 (333)
T 3ba1_A 242 GPKGVLINIGRGPHV 256 (333)
T ss_dssp CTTCEEEECSCGGGB
T ss_pred CCCCEEEECCCCchh
Confidence 888878776666543
No 177
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=38.96 E-value=1.5e+02 Score=24.78 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=51.5
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC---------------------------------h-------hH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP---------------------------------H-------AQ 42 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~---------------------------------~-------~~ 42 (222)
+..+++|+|.|..-....+.+..+|. +|.....-+ . +.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga--~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA--IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 45688999998877777777777774 344332211 0 13
Q ss_pred HHHHHHhccEEEEcCCC------ccccHHHHHHHHhCCcEEEeC--CCCccc
Q 027511 43 VRSVLISGHIFLNSSLT------EAFCIAILEAASCGLLTVSTR--VGGVPE 86 (222)
Q Consensus 43 ~~~ll~~adv~v~~s~~------E~~g~~ilEAma~G~PvVa~~--~gg~~e 86 (222)
+.+++..+|+++.+... ..+.-..++.|.-|--+|-.. .||..+
T Consensus 249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~ 300 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCE 300 (401)
T ss_dssp HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcC
Confidence 66778889999987432 123456778887776666433 455433
No 178
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=38.91 E-value=1.2e+02 Score=23.96 Aligned_cols=51 Identities=14% Similarity=0.181 Sum_probs=37.8
Q ss_pred EEEEEc-CCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCC
Q 027511 6 RFIVGG-DGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSL 58 (222)
Q Consensus 6 ~lvi~G-~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~ 58 (222)
++.|+| .|..-..+-....+.|. +|...+.-+..+..+.+..+|+++.+-.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~--~V~~~~~~~~~~~~~~~~~aDvVilavp 74 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGY--PISILDREDWAVAESILANADVVIVSVP 74 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTC--CEEEECTTCGGGHHHHHTTCSEEEECSC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCC--eEEEEECCcccCHHHHhcCCCEEEEeCC
Confidence 688898 99887777777766665 5777776555577788889999876543
No 179
>3lzd_A DPH2; diphthamide biosynthesis, radical SAM enzyme, gene triplicat iron-sulfur cluster, biosynthetic protein; 2.10A {Pyrococcus horikoshii} PDB: 3lzc_A
Probab=38.90 E-value=15 Score=31.09 Aligned_cols=58 Identities=9% Similarity=0.146 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
+.+++++++.|..--+..+|.++.+.+..+ ..|+||..+-. -+++.+.-.+-+|||++
T Consensus 284 ~~L~~ll~~~Gkk~y~i~vg~inp~KLanF--~iD~fV~vaCP---rlsidd~~~F~KPvLTP 341 (378)
T 3lzd_A 284 KRIVKLLKKHGREARLIVMNDVNYHKLEGF--PFEAYVVVACP---RVPLDDYGAWRKPVLTP 341 (378)
T ss_dssp HHHHHHHHHTTCEEEEEEESSCCHHHHTTS--CCSEEEECSCT---HHHHSCCSCCSSCEECH
T ss_pred HHHHHHHHHcCCcEEEEEeCCCCHHHHhCC--CCCEEEEecCC---CccccchhhCCCcccCH
Confidence 677888888888766777999988888776 49999988764 23444444555666644
No 180
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=38.84 E-value=94 Score=25.02 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=55.1
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC-------ChhHHHHHHHhccEEEEc-CCC-c---cccHHHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV-------PHAQVRSVLISGHIFLNS-SLT-E---AFCIAILEAAS 71 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v-------~~~~~~~ll~~adv~v~~-s~~-E---~~g~~ilEAma 71 (222)
+.++-|+|-|..-..+-+.+...|. +|.....- ...++.++++.+|+++.. +.+ + -++-..+..|.
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~G~--~V~~~dr~~~~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk 201 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAALGA--QVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMA 201 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHTTC--EEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSC
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC--EEEEECCCccccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCC
Confidence 4578899999888888888887775 45554422 234678899999997653 332 2 24446777777
Q ss_pred hCCcEEEeCCCCccc
Q 027511 72 CGLLTVSTRVGGVPE 86 (222)
Q Consensus 72 ~G~PvVa~~~gg~~e 86 (222)
-|.-+|-+..|++.+
T Consensus 202 ~gailin~srg~~vd 216 (303)
T 1qp8_A 202 EDAVFVNVGRAEVLD 216 (303)
T ss_dssp TTCEEEECSCGGGBC
T ss_pred CCCEEEECCCCcccC
Confidence 787788666665543
No 181
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=38.61 E-value=1.4e+02 Score=25.21 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=56.4
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCC--------CC-hhHHHHHHHhccEEEE-cCCC-c---cccHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGA--------VP-HAQVRSVLISGHIFLN-SSLT-E---AFCIAILEA 69 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~--------v~-~~~~~~ll~~adv~v~-~s~~-E---~~g~~ilEA 69 (222)
.-++-|+|-|..-..+.+.++.+|. +|..... +. ..++.++++.||+++. .+.+ + -++-..+..
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~ 222 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESLGM--YVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISL 222 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHH
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCC--EEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhh
Confidence 4478899999888888888888875 3554432 11 1368899999999654 3332 2 345567888
Q ss_pred HHhCCcEEEeCCCCccc
Q 027511 70 ASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 70 ma~G~PvVa~~~gg~~e 86 (222)
|--|.-+|-+..|++.+
T Consensus 223 mk~ga~lIN~aRg~~vd 239 (404)
T 1sc6_A 223 MKPGSLLINASRGTVVD 239 (404)
T ss_dssp SCTTEEEEECSCSSSBC
T ss_pred cCCCeEEEECCCChHHh
Confidence 88888888777776543
No 182
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=38.51 E-value=67 Score=26.20 Aligned_cols=56 Identities=9% Similarity=0.049 Sum_probs=34.2
Q ss_pred HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 16 RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 16 ~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.+..++.+++++.+. . ..++.+++.. .|+++.++-...-.-.+++|+..|++|++=
T Consensus 48 ~~~a~~~a~~~g~~~---~-----~~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~E 105 (390)
T 4h3v_A 48 AEAVRAAAGKLGWST---T-----ETDWRTLLERDDVQLVDVCTPGDSHAEIAIAALEAGKHVLCE 105 (390)
T ss_dssp HHHHHHHHHHHTCSE---E-----ESCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCc---c-----cCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCCceee
Confidence 344555566665431 1 2456777765 466655555444444667999999999863
No 183
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=38.35 E-value=1e+02 Score=26.67 Aligned_cols=78 Identities=10% Similarity=0.014 Sum_probs=55.9
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC------------hhHHHHHHHhccEEEEcCCCc-cccHHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP------------HAQVRSVLISGHIFLNSSLTE-AFCIAILEAA 70 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~------------~~~~~~ll~~adv~v~~s~~E-~~g~~ilEAm 70 (222)
.-++.|+|-|+--..+.+.++.+|. +|.....-+ ...+.+++..+|+++.+.-+. -+.-..++.|
T Consensus 247 GKTVgVIG~G~IGr~vA~~lrafGa--~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~atgt~~lI~~e~l~~M 324 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAGAGA--RVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKM 324 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECCSSSSSBCHHHHHHS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC--EEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECCCCccccCHHHHhcC
Confidence 4578999999888888888888875 576654311 123677889999998765443 4467888888
Q ss_pred HhCCcEEEeCCCC
Q 027511 71 SCGLLTVSTRVGG 83 (222)
Q Consensus 71 a~G~PvVa~~~gg 83 (222)
--|.-+|.+..|.
T Consensus 325 K~GAILINvGRgd 337 (464)
T 3n58_A 325 KDMCIVGNIGHFD 337 (464)
T ss_dssp CTTEEEEECSSST
T ss_pred CCCeEEEEcCCCC
Confidence 8888777655544
No 184
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=37.93 E-value=85 Score=20.63 Aligned_cols=108 Identities=6% Similarity=0.008 Sum_probs=65.9
Q ss_pred ceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh---------ccEEEEcCC-CccccHHHHHHHH-
Q 027511 4 KVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS---------GHIFLNSSL-TEAFCIAILEAAS- 71 (222)
Q Consensus 4 ~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~---------adv~v~~s~-~E~~g~~ilEAma- 71 (222)
+.+++|+.+.+ ....+....++.+....|..... .++....+.. .|+++.-.. .+.-|..+++.+.
T Consensus 2 ~~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~~--~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~ 79 (140)
T 1k68_A 2 HKKIFLVEDNKADIRLIQEALANSTVPHEVVTVRD--GMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKS 79 (140)
T ss_dssp CCEEEEECCCHHHHHHHHHHHHTCSSCCEEEEECS--HHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEECC--HHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHc
Confidence 45677887654 34667777777665435655554 5677777764 577665433 4456777777765
Q ss_pred ----hCCcEEEe-CCCC---ccccccCCceEE-eCC-CHHHHHHHHHHHHhc
Q 027511 72 ----CGLLTVST-RVGG---VPEVLPDDMVVL-AEP-DPGDMVLAIRKAISL 113 (222)
Q Consensus 72 ----~G~PvVa~-~~gg---~~e~i~~~~~g~-~~~-~~~~la~~i~~ll~~ 113 (222)
..+|+|.- .... ..+.+..+..++ .-| +.+++..+|..+++.
T Consensus 80 ~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 131 (140)
T 1k68_A 80 DPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIEEF 131 (140)
T ss_dssp STTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred CcccccccEEEEecCCcHHHHHHHHHhchhheecCCCCHHHHHHHHHHHHHH
Confidence 45777743 3322 222334454443 334 889999999988765
No 185
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=37.93 E-value=71 Score=23.74 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=40.4
Q ss_pred CceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCc---cccHHHHHHHHhCCcEEE
Q 027511 3 VKVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE---AFCIAILEAASCGLLTVS 78 (222)
Q Consensus 3 p~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E---~~g~~ilEAma~G~PvVa 78 (222)
.++.+++.|-.+ .++.+.++++++|- .+...++ ..+.-+|.....+ .-..+.+.|++.|++||.
T Consensus 3 ~~~~~~~sg~~~~~~~~l~~~~~~~G~----~~~~~~~--------~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV~ 70 (214)
T 1t15_A 3 KRMSMVVSGLTPEEFMLVYKFARKHHI----TLTNLIT--------EETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVS 70 (214)
T ss_dssp -CCEEEEESCCHHHHHHHHHHHHHHTC----EECSSCC--------TTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhCC----EEeCccC--------CCCcEEEEeCCcccchhhhHHHHHHHhcCCEEeC
Confidence 466777777443 44678888888763 2334332 1233333333221 336788999999999997
Q ss_pred eCC
Q 027511 79 TRV 81 (222)
Q Consensus 79 ~~~ 81 (222)
.++
T Consensus 71 ~~W 73 (214)
T 1t15_A 71 YFW 73 (214)
T ss_dssp THH
T ss_pred HHH
Confidence 653
No 186
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=37.75 E-value=1.4e+02 Score=26.49 Aligned_cols=76 Identities=12% Similarity=0.222 Sum_probs=51.1
Q ss_pred CceEEEEEcCCccHHHHHHHHH----HcCCC-----CcEEEeCC----------CC------------hhHHHHHHHh--
Q 027511 3 VKVRFIVGGDGPKRVRLEEMRE----KHSLQ-----DRVEMLGA----------VP------------HAQVRSVLIS-- 49 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~----~~~l~-----~~V~~~g~----------v~------------~~~~~~ll~~-- 49 (222)
.+.++++.|.|..---+.+++. +.|++ .+|.+... ++ ...+.+.++.
T Consensus 281 ~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~~~~L~eav~~vk 360 (555)
T 1gq2_A 281 SDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCEMKNLEDIVKDIK 360 (555)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCCCCCHHHHHHHHC
T ss_pred hhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCCCCCHHHHHhhcC
Confidence 4788999998866533333322 24653 45543311 11 1258888886
Q ss_pred ccEEEEcCC-CccccHHHHHHHH--hCCcEEE
Q 027511 50 GHIFLNSSL-TEAFCIAILEAAS--CGLLTVS 78 (222)
Q Consensus 50 adv~v~~s~-~E~~g~~ilEAma--~G~PvVa 78 (222)
+|+||-.|. ...|.--++++|+ +-.|+|-
T Consensus 361 p~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 392 (555)
T 1gq2_A 361 PTVLIGVAAIGGAFTQQILQDMAAFNKRPIIF 392 (555)
T ss_dssp CSEEEECSCCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred CCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 999999996 6889999999998 3677773
No 187
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=37.55 E-value=89 Score=20.76 Aligned_cols=107 Identities=18% Similarity=0.206 Sum_probs=67.1
Q ss_pred ceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEcCC-CccccHHHHHHHHh-----CC
Q 027511 4 KVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSSL-TEAFCIAILEAASC-----GL 74 (222)
Q Consensus 4 ~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~s~-~E~~g~~ilEAma~-----G~ 74 (222)
..+++|+.+.+ .+..+....++.+. .|..... .++....+.. .|+++.-.. .+.-|..+++.+.. .+
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~--~v~~~~~--~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~ 81 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGF--DSDMVHS--AAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDL 81 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTC--EEEEECS--HHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTC
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCC--eEEEECC--HHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCC
Confidence 46788887654 34667777777665 3554443 5666666655 477665433 45567788887764 67
Q ss_pred cEEEeCCCCcc-----ccccCCceEEe-CC-CHHHHHHHHHHHHhcC
Q 027511 75 LTVSTRVGGVP-----EVLPDDMVVLA-EP-DPGDMVLAIRKAISLL 114 (222)
Q Consensus 75 PvVa~~~gg~~-----e~i~~~~~g~~-~~-~~~~la~~i~~ll~~~ 114 (222)
|+|.-...... +.+..+..++. -| +.+++..+|.++++..
T Consensus 82 ~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 82 AIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp EEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHHhc
Confidence 88854332211 33444554443 34 8999999999999763
No 188
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=37.51 E-value=91 Score=23.57 Aligned_cols=63 Identities=19% Similarity=0.174 Sum_probs=42.6
Q ss_pred HHHHHHHHHcCCCCcEEEeC--CCChhHHHHHHHhccEEEEcCCCcc-----------ccHHHHHHHHhCCcEEEeCCC
Q 027511 17 VRLEEMREKHSLQDRVEMLG--AVPHAQVRSVLISGHIFLNSSLTEA-----------FCIAILEAASCGLLTVSTRVG 82 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g--~v~~~~~~~ll~~adv~v~~s~~E~-----------~g~~ilEAma~G~PvVa~~~g 82 (222)
..+.+..+++|. .+..+. .-+.++..+.+.++|.++.|. .+. +--.+-|+...|+|++.+-.|
T Consensus 47 ~s~~~a~~~lG~--~v~~~~i~~~~~~~~~~~l~~ad~I~l~G-G~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAG 122 (206)
T 3l4e_A 47 EAGKKALESLGL--LVEELDIATESLGEITTKLRKNDFIYVTG-GNTFFLLQELKRTGADKLILEEIAAGKLYIGESAG 122 (206)
T ss_dssp HHHHHHHHHTTC--EEEECCTTTSCHHHHHHHHHHSSEEEECC-SCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHH
T ss_pred HHHHHHHHHcCC--eEEEEEecCCChHHHHHHHHhCCEEEECC-CCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHH
Confidence 456666777886 355542 123567778899999999887 332 223567777889999976543
No 189
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=37.35 E-value=66 Score=27.68 Aligned_cols=79 Identities=10% Similarity=0.022 Sum_probs=56.2
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC------------hhHHHHHHHhccEEEEcCCCc-cccHHHHHH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP------------HAQVRSVLISGHIFLNSSLTE-AFCIAILEA 69 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~------------~~~~~~ll~~adv~v~~s~~E-~~g~~ilEA 69 (222)
..-++.|+|-|+.-..+.+.++.+|. +|.....-+ ...+.+++..+|+++.++-+. .+.-..++.
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga--~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~atgt~~lI~~e~l~~ 296 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGS--IVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITCTGNKNVVTREHLDR 296 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCHHHHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEECCCCcccCCHHHHHh
Confidence 35578999999988888888888775 566655321 124677888999999875533 356678888
Q ss_pred HHhCCcEEEeCCCC
Q 027511 70 ASCGLLTVSTRVGG 83 (222)
Q Consensus 70 ma~G~PvVa~~~gg 83 (222)
|.-|.-+|....|.
T Consensus 297 MK~gailINvgrg~ 310 (435)
T 3gvp_A 297 MKNSCIVCNMGHSN 310 (435)
T ss_dssp SCTTEEEEECSSTT
T ss_pred cCCCcEEEEecCCC
Confidence 98887776655553
No 190
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=37.29 E-value=80 Score=23.84 Aligned_cols=66 Identities=14% Similarity=0.134 Sum_probs=39.1
Q ss_pred ceEEEEEcCC-ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCc---cccHHHHHHHHhCCcEEEe
Q 027511 4 KVRFIVGGDG-PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTE---AFCIAILEAASCGLLTVST 79 (222)
Q Consensus 4 ~~~lvi~G~g-~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E---~~g~~ilEAma~G~PvVa~ 79 (222)
++.+++.|-. ..+..++++++.+|- .+...++ ..+.-+|.....+ .-..+.+.|++.|+|||..
T Consensus 7 ~~~i~~sg~~~~~~~~l~~~~~~~G~----~~~~~~~--------~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~~ 74 (229)
T 1l0b_A 7 DISMVVSGLTPKEVMIVQKFAEKYRL----ALTDVIT--------EETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSY 74 (229)
T ss_dssp CCEEEEESCCHHHHHHHHHHHHHTTC----EECSSCC--------SSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEET
T ss_pred CeEEEEcCCCHHHHHHHHHHHHHcCC----EEeCCcC--------CCCCEEEEcCCccccccccHHHHHHHHCCCcEecH
Confidence 4556666643 234578888888763 2333332 1233334333222 3467899999999999976
Q ss_pred CC
Q 027511 80 RV 81 (222)
Q Consensus 80 ~~ 81 (222)
++
T Consensus 75 ~W 76 (229)
T 1l0b_A 75 SW 76 (229)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 191
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=36.89 E-value=98 Score=21.02 Aligned_cols=109 Identities=15% Similarity=-0.006 Sum_probs=61.7
Q ss_pred ceEEEEEcCCcc-HHHHHHHHHHc-CCCCcEEEeCCCChhHHHHHHHh---ccEEEEcCC-CccccHHHHHHHH---hCC
Q 027511 4 KVRFIVGGDGPK-RVRLEEMREKH-SLQDRVEMLGAVPHAQVRSVLIS---GHIFLNSSL-TEAFCIAILEAAS---CGL 74 (222)
Q Consensus 4 ~~~lvi~G~g~~-~~~l~~~~~~~-~l~~~V~~~g~v~~~~~~~ll~~---adv~v~~s~-~E~~g~~ilEAma---~G~ 74 (222)
.++++|+.+.+. ...+....++. +. ..|..... .++....+.. .|+++.-.. .+.-|..+++.+. .++
T Consensus 3 ~~~iLivdd~~~~~~~l~~~L~~~~g~-~~v~~~~~--~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ 79 (154)
T 2qsj_A 3 LTVVLIVDDHHLIRAGAKNLLEGAFSG-MRVEGAET--VSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSN 79 (154)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHCTT-EEEEEESS--HHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTS
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCc-eEEEEecC--HHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCC
Confidence 568888886543 45666666665 43 23444444 5677777765 577665433 3344666666664 367
Q ss_pred cEEEeCCCCc----cccccCCceEEe-CC-CHHHHHHHHHHHHhcCC
Q 027511 75 LTVSTRVGGV----PEVLPDDMVVLA-EP-DPGDMVLAIRKAISLLP 115 (222)
Q Consensus 75 PvVa~~~gg~----~e~i~~~~~g~~-~~-~~~~la~~i~~ll~~~~ 115 (222)
|+|.-..... .+.+..+..++. -| +.+++..+|..++....
T Consensus 80 ~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~l~~~~~~~~ 126 (154)
T 2qsj_A 80 AVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLILEGEI 126 (154)
T ss_dssp EEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHHHHHHHTTCC
T ss_pred eEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHHHHHHHHHcCCE
Confidence 8875332222 223344544443 33 88999999999998654
No 192
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=36.69 E-value=1e+02 Score=24.60 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=23.0
Q ss_pred HHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 47 LISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 47 l~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
-...|+++.++-...-.-.+.+|+..|++|++-
T Consensus 63 ~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~e 95 (319)
T 1tlt_A 63 AASCDAVFVHSSTASHFDVVSTLLNAGVHVCVD 95 (319)
T ss_dssp HTTCSEEEECSCTTHHHHHHHHHHHTTCEEEEE
T ss_pred hcCCCEEEEeCCchhHHHHHHHHHHcCCeEEEe
Confidence 345788776665554455666889999998863
No 193
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=36.68 E-value=1.1e+02 Score=22.25 Aligned_cols=37 Identities=14% Similarity=0.137 Sum_probs=25.1
Q ss_pred HHHHHhccEEEEcCC----CccccHHHHH---HHHhCCcEEEeC
Q 027511 44 RSVLISGHIFLNSSL----TEAFCIAILE---AASCGLLTVSTR 80 (222)
Q Consensus 44 ~~ll~~adv~v~~s~----~E~~g~~ilE---Ama~G~PvVa~~ 80 (222)
...+.+||++|.--. .+.=+.+.+| |.+.|+|||+-.
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 578899999875321 2333446666 678999999743
No 194
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=36.68 E-value=1.5e+02 Score=24.38 Aligned_cols=51 Identities=4% Similarity=-0.025 Sum_probs=35.1
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEE------------------eCCCChhHHHHHHHhccEEEE
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEM------------------LGAVPHAQVRSVLISGHIFLN 55 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~------------------~g~v~~~~~~~ll~~adv~v~ 55 (222)
|.-++.|+|.|..-..+.+.++++|+. |.. ..+.+.+.+.++...+|+...
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~--vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYK--IAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCE--EEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE--EEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 455789999998888888888888863 222 223334557788888888643
No 195
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=36.39 E-value=1.4e+02 Score=24.50 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=27.0
Q ss_pred hHHHHHHHh--ccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 41 AQVRSVLIS--GHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 41 ~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.++.+++.. .|+++.++-...-.-.+.+|+..|++|++
T Consensus 73 ~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~ 112 (383)
T 3oqb_A 73 TDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVYC 112 (383)
T ss_dssp SCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEE
T ss_pred CCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEEE
Confidence 567778876 57766555544445566799999999986
No 196
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=36.16 E-value=90 Score=25.50 Aligned_cols=80 Identities=11% Similarity=0.183 Sum_probs=54.8
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC-----------ChhHHHHHHHhccEEEE-cCC-Cc---cccHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV-----------PHAQVRSVLISGHIFLN-SSL-TE---AFCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v-----------~~~~~~~ll~~adv~v~-~s~-~E---~~g~~il 67 (222)
+-++-|+|-|..-..+.+.++.+|. +|.....- ...++.+++++||+++. .+. .+ -++-..+
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l 214 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASALGM--HVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELF 214 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCC--EEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHH
Confidence 4578999999888888888888875 35443211 12467899999999765 222 22 3456677
Q ss_pred HHHHhCCcEEEeCCCCcc
Q 027511 68 EAASCGLLTVSTRVGGVP 85 (222)
Q Consensus 68 EAma~G~PvVa~~~gg~~ 85 (222)
..|--|.-+|-+..|++.
T Consensus 215 ~~mk~gailIN~aRG~~v 232 (324)
T 3evt_A 215 QQTKQQPMLINIGRGPAV 232 (324)
T ss_dssp HTCCSCCEEEECSCGGGB
T ss_pred hcCCCCCEEEEcCCChhh
Confidence 778788888877666644
No 197
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=36.14 E-value=1.5e+02 Score=23.51 Aligned_cols=64 Identities=9% Similarity=0.019 Sum_probs=36.4
Q ss_pred HHHHHHHHHcCCCCcEEEeCC-CCh----hHHHHHHH---hccEEEEcCCCccccHHHHHHHHhCCcEEEeCCC
Q 027511 17 VRLEEMREKHSLQDRVEMLGA-VPH----AQVRSVLI---SGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVG 82 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~-v~~----~~~~~ll~---~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~g 82 (222)
..+++.++++|.. +.+... -+. +.+..++. ..|.+|..+......-.+-++...|+|||..+..
T Consensus 24 ~g~~~~a~~~g~~--~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~ 95 (350)
T 3h75_A 24 QFMQAAARDLGLD--LRILYAERDPQNTLQQARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSP 95 (350)
T ss_dssp HHHHHHHHHHTCE--EEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESC
T ss_pred HHHHHHHHHcCCe--EEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCC
Confidence 4555667777764 433322 122 23555666 6787776553333333344455789999987764
No 198
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=36.08 E-value=83 Score=25.67 Aligned_cols=39 Identities=10% Similarity=-0.076 Sum_probs=26.0
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++. ..|+++.++-...-.-.+.+|+..|++|++=
T Consensus 79 ~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~E 119 (350)
T 3rc1_A 79 EGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAE 119 (350)
T ss_dssp ESHHHHHTCTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCcEEEe
Confidence 34566775 3677766655544444566889999998763
No 199
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=36.06 E-value=83 Score=23.45 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=58.0
Q ss_pred HHHHHHHH--HcCCCCcEEEeCCCChhHHHHHHHhc--c----EEEEcCCCccccHHHHHHH-HhCCcEEE---eCCCCc
Q 027511 17 VRLEEMRE--KHSLQDRVEMLGAVPHAQVRSVLISG--H----IFLNSSLTEAFCIAILEAA-SCGLLTVS---TRVGGV 84 (222)
Q Consensus 17 ~~l~~~~~--~~~l~~~V~~~g~v~~~~~~~ll~~a--d----v~v~~s~~E~~g~~ilEAm-a~G~PvVa---~~~gg~ 84 (222)
..+++.++ ++++ .|.|.-+=...++-+.+..+ + +.++|.-+.+.++++..|+ +.++|+|= ||+- -
T Consensus 41 ~~l~~~a~~~~~g~--~l~~~QSN~EGeLId~Ih~a~~~~~dgIIINpgAyTHtSvAlrDAl~~v~~P~VEVHiSNi~-a 117 (176)
T 2c4w_A 41 EIMQTFVKQGNLDV--ELEFFQTNFEGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQ-A 117 (176)
T ss_dssp HHHHHHHHHTTCCE--EEEEEECSCHHHHHHHHHHHHSSSCCEEEEECGGGGGTCHHHHHHHHTSSSCEEEEESSCGG-G
T ss_pred HHHHHHhccccCCC--EEEEEeeCcHHHHHHHHHHhccCCeeEEEECcchhccchHHHHHHHHhCCCCEEEEEecCcc-c
Confidence 44455555 5554 47776666566777777654 2 5789999999999999997 46899993 3332 2
Q ss_pred cccccCC------ceEEeCC-CHHHHHHHHHHHH
Q 027511 85 PEVLPDD------MVVLAEP-DPGDMVLAIRKAI 111 (222)
Q Consensus 85 ~e~i~~~------~~g~~~~-~~~~la~~i~~ll 111 (222)
+|-..+. ..|.... -.....-+|..++
T Consensus 118 RE~FRh~S~is~~a~GvI~G~G~~gY~lAl~al~ 151 (176)
T 2c4w_A 118 REEFRKNSYTGAACGGVIMGFGPLGYNMALMAMV 151 (176)
T ss_dssp SCGGGTCCHHHHHSSEEEESSTTHHHHHHHHHHH
T ss_pred ccccccccccccceeEEEEecCHHHHHHHHHHHH
Confidence 3433332 4455555 5555555555544
No 200
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=35.92 E-value=22 Score=29.86 Aligned_cols=14 Identities=7% Similarity=0.062 Sum_probs=10.4
Q ss_pred HHHHHHhCCcEEEe
Q 027511 66 ILEAASCGLLTVST 79 (222)
Q Consensus 66 ilEAma~G~PvVa~ 79 (222)
...|+..|++|++=
T Consensus 87 a~~al~aGkhVl~E 100 (372)
T 4gmf_A 87 ARHFLARGVHVIQE 100 (372)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHHcCCcEEEe
Confidence 55778888888763
No 201
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=35.88 E-value=69 Score=23.53 Aligned_cols=65 Identities=14% Similarity=0.065 Sum_probs=41.2
Q ss_pred hHHHHHHHhccEEEEcCCCccccHH--HHHHHH-------hCCcEEEeCCCCccccccC-C-------ceEEeCCCHHHH
Q 027511 41 AQVRSVLISGHIFLNSSLTEAFCIA--ILEAAS-------CGLLTVSTRVGGVPEVLPD-D-------MVVLAEPDPGDM 103 (222)
Q Consensus 41 ~~~~~ll~~adv~v~~s~~E~~g~~--ilEAma-------~G~PvVa~~~gg~~e~i~~-~-------~~g~~~~~~~~l 103 (222)
+...-+...||.+|...- ++|+- ++|++. .++| |.-+ |....++.+ + ......+|++++
T Consensus 89 ~Rk~~~~~~sda~ivlpG--G~GTl~El~e~lt~~q~g~~~~kP-vll~-g~~~~l~~~~gfi~~~~~~~~~~~~~~~e~ 164 (171)
T 1weh_A 89 QRIGRLLDLGAGYLALPG--GVGTLAELVLAWNLLYLRRGVGRP-LAVD-PYWLGLLKAHGEIAPEDVGLLRVVADEEDL 164 (171)
T ss_dssp HHHHHHHHHEEEEEECSC--CHHHHHHHHHHHHHHHTCSSCSCC-EEEC-GGGGGTCCCBTTBCHHHHTTSEECCSHHHH
T ss_pred HHHHHHHHhCCEEEEeCC--CccHHHHHHHHHHHHHhCccCCCe-EEEC-cchhhhHhhcCCCChhhcCeEEEeCCHHHH
Confidence 444555667898875433 35654 788888 6899 7777 655555421 1 113566788888
Q ss_pred HHHHHH
Q 027511 104 VLAIRK 109 (222)
Q Consensus 104 a~~i~~ 109 (222)
.+.+.+
T Consensus 165 ~~~l~~ 170 (171)
T 1weh_A 165 RRFLRS 170 (171)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 887764
No 202
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=35.57 E-value=78 Score=26.62 Aligned_cols=81 Identities=19% Similarity=0.165 Sum_probs=55.0
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCC--------CChhHHHHHHHhccEEEE-cCCCc--------cccHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGA--------VPHAQVRSVLISGHIFLN-SSLTE--------AFCIAI 66 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~--------v~~~~~~~ll~~adv~v~-~s~~E--------~~g~~i 66 (222)
+.++-|+|-|..-..+.+.++.+|. +|..... ....++.+++..||+++. .+.++ -++-..
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~ 193 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLGW--KVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPR 193 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTC--EEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCCC--EEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHH
Confidence 4578899999888888888887775 3544331 122457889999999765 33322 245567
Q ss_pred HHHHHhCCcEEEeCCCCccc
Q 027511 67 LEAASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 67 lEAma~G~PvVa~~~gg~~e 86 (222)
+..|.-|.-+|-+..|++.+
T Consensus 194 l~~mk~gailIN~sRG~vvd 213 (380)
T 2o4c_A 194 LAALRPGTWLVNASRGAVVD 213 (380)
T ss_dssp HHTSCTTEEEEECSCGGGBC
T ss_pred HhhCCCCcEEEECCCCcccC
Confidence 88888888888666666543
No 203
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=35.19 E-value=1.9e+02 Score=23.88 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=53.0
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC-------------hhHHHHHHHhccEEEEc-CCC-c---cccHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP-------------HAQVRSVLISGHIFLNS-SLT-E---AFCIA 65 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~-------------~~~~~~ll~~adv~v~~-s~~-E---~~g~~ 65 (222)
+-++-|+|-|..-..+.+.+..+|.. +|.....-+ .+++.+++..+|+++.. +.+ + -++-.
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~G~~-~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 242 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPFNPK-ELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKE 242 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCCS-EEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCc-EEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHH
Confidence 45788999998888888887777642 155544221 12577889999997653 332 2 34455
Q ss_pred HHHHHHhCCcEEEeCCCCcc
Q 027511 66 ILEAASCGLLTVSTRVGGVP 85 (222)
Q Consensus 66 ilEAma~G~PvVa~~~gg~~ 85 (222)
.+..|.-|.-+|.+..|++.
T Consensus 243 ~l~~mk~ga~lIn~arG~~v 262 (364)
T 2j6i_A 243 LLSKFKKGAWLVNTARGAIC 262 (364)
T ss_dssp HHTTSCTTEEEEECSCGGGB
T ss_pred HHhhCCCCCEEEECCCCchh
Confidence 67777777777777666543
No 204
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=34.96 E-value=1.5e+02 Score=23.69 Aligned_cols=68 Identities=6% Similarity=-0.022 Sum_probs=37.4
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
|+++++ +-+ ...+..++.+++++.+. .+... .+.+ -...|+++.++-.....-.+.+|+..|++|++-
T Consensus 26 ~~~~l~-v~d-~~~~~~~~~a~~~g~~~--~~~~~--~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk~V~~E 93 (323)
T 1xea_A 26 PDIELV-LCT-RNPKVLGTLATRYRVSA--TCTDY--RDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGIPTFVD 93 (323)
T ss_dssp TTEEEE-EEC-SCHHHHHHHHHHTTCCC--CCSST--TGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTCCEEEE
T ss_pred CCceEE-EEe-CCHHHHHHHHHHcCCCc--cccCH--HHHh---hcCCCEEEEECCchhHHHHHHHHHHCCCeEEEe
Confidence 455655 332 23344555666665431 01111 1211 246788777666555555666889999999863
No 205
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=34.95 E-value=1.5e+02 Score=25.44 Aligned_cols=39 Identities=5% Similarity=-0.085 Sum_probs=26.3
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhC------CcEEEe
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCG------LLTVST 79 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G------~PvVa~ 79 (222)
.++.+++. ..|+++.++-...-.-.+.+|+..| ++|++=
T Consensus 98 ~d~~ell~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~E 144 (479)
T 2nvw_A 98 DSLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVE 144 (479)
T ss_dssp SCHHHHHHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEE
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEe
Confidence 44667776 4688766655444444566899999 888863
No 206
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=34.92 E-value=1.4e+02 Score=26.75 Aligned_cols=76 Identities=13% Similarity=0.242 Sum_probs=51.4
Q ss_pred CceEEEEEcCCccHHHHHHHHHH----cCCC-----CcEEEeCC----------CC------------hhHHHHHHHh--
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREK----HSLQ-----DRVEMLGA----------VP------------HAQVRSVLIS-- 49 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~----~~l~-----~~V~~~g~----------v~------------~~~~~~ll~~-- 49 (222)
.+.++++.|.|..---+.+++.. .|+. .+|.+... ++ ...+.+.++.
T Consensus 319 ~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~A~~~~~~~~L~eav~~vk 398 (605)
T 1o0s_A 319 SQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPETTSILEVIRAAR 398 (605)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCBSSCCCCCHHHHHHHHC
T ss_pred hhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHHHhhcCCCCCHHHHHhhcC
Confidence 47889999988665443333332 5653 34443211 11 1258888886
Q ss_pred ccEEEEcCC-CccccHHHHHHHH--hCCcEEE
Q 027511 50 GHIFLNSSL-TEAFCIAILEAAS--CGLLTVS 78 (222)
Q Consensus 50 adv~v~~s~-~E~~g~~ilEAma--~G~PvVa 78 (222)
+|+||-.|. ...|.--++++|+ +-.|+|-
T Consensus 399 pdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 399 PGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp CSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred CCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 999999996 6889999999998 4777773
No 207
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=34.17 E-value=1.4e+02 Score=25.15 Aligned_cols=39 Identities=3% Similarity=-0.034 Sum_probs=26.7
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhC------CcEEEe
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCG------LLTVST 79 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G------~PvVa~ 79 (222)
.++.+++. ..|+++.++-...-.-.+..|+..| ++|++-
T Consensus 79 ~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~E 125 (438)
T 3btv_A 79 PTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVE 125 (438)
T ss_dssp SSHHHHHHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEE
T ss_pred CCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEec
Confidence 45667776 4688776665444444566899999 888864
No 208
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=32.93 E-value=69 Score=21.72 Aligned_cols=80 Identities=18% Similarity=0.113 Sum_probs=52.0
Q ss_pred HHHHHHHHHcCCCCcEEEeCCCCh-hHH-HHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCccccccCCceE
Q 027511 17 VRLEEMREKHSLQDRVEMLGAVPH-AQV-RSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLPDDMVV 94 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~~g~v~~-~~~-~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~~~~~g 94 (222)
+.|++.++++|..-.|.-.|...- ..+ .+-+..||+++..+..+.-.. |- ..|+|++-+.... .+
T Consensus 23 eaLekaA~~~G~~ikVEtqgs~g~~n~Lt~~~I~~AD~VIia~d~~v~~~---~R-F~gk~v~~~~v~~---~i------ 89 (106)
T 2m1z_A 23 QALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNK---ER-FDGKVVLEVPVSA---PI------ 89 (106)
T ss_dssp HHHHHHHHHHTCEEEEEEEETTEESSCCCHHHHHHCSEEEEEESSCCSTH---HH-HTTSEEEEECTTH---HH------
T ss_pred HHHHHHHHHCCCEEEEEEecCccccCCCCHHHHhhCCEEEEeccccccch---hc-cCCCcEEEEcHHH---HH------
Confidence 678888999999878888887521 222 456679999998877544221 22 2399999776542 22
Q ss_pred EeCCCHHHHHHHHHHHHh
Q 027511 95 LAEPDPGDMVLAIRKAIS 112 (222)
Q Consensus 95 ~~~~~~~~la~~i~~ll~ 112 (222)
.|++.+.+....++.
T Consensus 90 ---~~~~~~l~~a~~~~~ 104 (106)
T 2m1z_A 90 ---KDAEKVINAALALID 104 (106)
T ss_dssp ---HCHHHHHHHHHHHHT
T ss_pred ---HCHHHHHHHHHHHHh
Confidence 256666666655553
No 209
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=31.70 E-value=1.1e+02 Score=26.67 Aligned_cols=80 Identities=10% Similarity=0.019 Sum_probs=55.8
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh------------hHHHHHHHhccEEEEcCCCcc-ccHHHHHH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH------------AQVRSVLISGHIFLNSSLTEA-FCIAILEA 69 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~------------~~~~~ll~~adv~v~~s~~E~-~g~~ilEA 69 (222)
..-++.|+|-|..-..+.+.+..+|. +|.....-+. .++.+++..+|+++....+.+ +.-..++.
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~G~--~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~ 333 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGLGA--RVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKLEHLLK 333 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHTC--EEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSSSSBCHHHHTT
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCcC--EEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECCChhhhcCHHHHhh
Confidence 34578999999888888887777764 5666554321 246778899999887754333 55567777
Q ss_pred HHhCCcEEEeCCCCc
Q 027511 70 ASCGLLTVSTRVGGV 84 (222)
Q Consensus 70 ma~G~PvVa~~~gg~ 84 (222)
|--|.-+|-...|+.
T Consensus 334 MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 334 MKNNAVVGNIGHFDD 348 (479)
T ss_dssp CCTTCEEEECSSTTT
T ss_pred cCCCcEEEEeCCCCc
Confidence 888887776666655
No 210
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=31.53 E-value=2.1e+02 Score=23.37 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=34.1
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeC------------------CCChhHHHHHHHhccEEEE
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLG------------------AVPHAQVRSVLISGHIFLN 55 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g------------------~v~~~~~~~ll~~adv~v~ 55 (222)
|.-++.|+|.|.....+.+.++++|.. |..+. ..+.+.+.++...+|+.+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~--viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYK--VVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE--EEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE--EEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 456899999998888888888888873 33322 2233456666677776543
No 211
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=31.43 E-value=76 Score=25.56 Aligned_cols=39 Identities=10% Similarity=0.035 Sum_probs=26.9
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
.++.+++. ..|+++.++-...-.-.+.+|+..|++|++=
T Consensus 56 ~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~E 96 (336)
T 2p2s_A 56 ASAEQLITDASIDLIACAVIPCDRAELALRTLDAGKDFFTA 96 (336)
T ss_dssp SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCHHHHhhCCCCCEEEEeCChhhHHHHHHHHHHCCCcEEEe
Confidence 56778887 4688666555443344556899999999873
No 212
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=30.91 E-value=1e+02 Score=19.35 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=59.7
Q ss_pred eEEEEEcCCcc-HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEc-CCCccccHHHHHHHH-----hCCc
Q 027511 5 VRFIVGGDGPK-RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNS-SLTEAFCIAILEAAS-----CGLL 75 (222)
Q Consensus 5 ~~lvi~G~g~~-~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~-s~~E~~g~~ilEAma-----~G~P 75 (222)
.+++++.+.+. ...+.+..+..+. +|..... .++....+.. .|+.+.- ...+.-|..+++.+. ..+|
T Consensus 2 ~~iliv~~~~~~~~~l~~~l~~~g~--~v~~~~~--~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ 77 (119)
T 2j48_A 2 GHILLLEEEDEAATVVCEMLTAAGF--KVIWLVD--GSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPP 77 (119)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTC--EEEEESC--HHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCC
T ss_pred CEEEEEeCCHHHHHHHHHHHHhCCc--EEEEecC--HHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCC
Confidence 36777776543 4566777776665 4555443 4666665554 4776543 334556777788775 4577
Q ss_pred EEE-eCCCCccccccCCceEEe-CC-CHHHHHHHHHHHHh
Q 027511 76 TVS-TRVGGVPEVLPDDMVVLA-EP-DPGDMVLAIRKAIS 112 (222)
Q Consensus 76 vVa-~~~gg~~e~i~~~~~g~~-~~-~~~~la~~i~~ll~ 112 (222)
+|. +..+...+....+..++. -| +.+++...+..++.
T Consensus 78 ii~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~ 117 (119)
T 2j48_A 78 LVLFLGEPPVDPLLTAQASAILSKPLDPQLLLTTLQGLCP 117 (119)
T ss_dssp CEEEESSCCSSHHHHHHCSEECSSCSTTHHHHHHHHTTCC
T ss_pred EEEEeCCCCchhhhhcCHHHhccCCCCHHHHHHHHHHHhc
Confidence 774 333222233334444443 33 77888888876553
No 213
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=30.85 E-value=1.1e+02 Score=24.87 Aligned_cols=38 Identities=5% Similarity=0.056 Sum_probs=25.7
Q ss_pred hHHHHHHH--hccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 41 AQVRSVLI--SGHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
.++.+++. ..|+++.++-...-.-.+..|+..|++|++
T Consensus 55 ~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~ 94 (358)
T 3gdo_A 55 HELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVM 94 (358)
T ss_dssp SSTHHHHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEE
Confidence 45566776 467766555544444456689999999986
No 214
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=30.73 E-value=67 Score=26.08 Aligned_cols=106 Identities=10% Similarity=0.016 Sum_probs=58.5
Q ss_pred eEEEEEcCCccHHHHHHHHHHc---CCCCcEE---EeCCCChhHHHHHHHhccEEEEc---CCCccccHHHHHHHHh---
Q 027511 5 VRFIVGGDGPKRVRLEEMREKH---SLQDRVE---MLGAVPHAQVRSVLISGHIFLNS---SLTEAFCIAILEAASC--- 72 (222)
Q Consensus 5 ~~lvi~G~g~~~~~l~~~~~~~---~l~~~V~---~~g~v~~~~~~~ll~~adv~v~~---s~~E~~g~~ilEAma~--- 72 (222)
.+++|++.|.......+.++.+ |+.-.|. .+-.++.+.+.+.+...+-+|.. +..-++|..+.+.++.
T Consensus 203 ~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~gG~g~~v~~~l~~~~~ 282 (324)
T 1umd_B 203 KDLTLICYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLL 282 (324)
T ss_dssp SSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECCEEETCCHHHHHHHHHHHSCEEEEEEEESTTCHHHHHHHHHHHHHG
T ss_pred CCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEeceecCCCHHHHHHHHhcCCeEEEEecCCcCCCHHHHHHHHHHHhCc
Confidence 3567788887776666555444 5443333 34456777788877776543322 2245677777776653
Q ss_pred ---CCcEEEeCCCCccccccCCceEEeCCCHHHHHHHHHHHHh
Q 027511 73 ---GLLTVSTRVGGVPEVLPDDMVVLAEPDPGDMVLAIRKAIS 112 (222)
Q Consensus 73 ---G~PvVa~~~gg~~e~i~~~~~g~~~~~~~~la~~i~~ll~ 112 (222)
..|+..- |......+.+..-..-.+++.+++++.++++
T Consensus 283 ~~l~~~v~~v--g~~d~~~~~~l~~~~g~~~~~I~~~i~~~l~ 323 (324)
T 1umd_B 283 DMLLAPPIRV--TGFDTPYPYAQDKLYLPTVTRILNAAKRALD 323 (324)
T ss_dssp GGCSSCCEEE--EECSSCCCSTTHHHHSCCHHHHHHHHHHHHH
T ss_pred cccCCCeEEE--eCCCCCCCHHHHHHhCcCHHHHHHHHHHHhh
Confidence 2455321 1111122222000123488999999988764
No 215
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=30.60 E-value=1.9e+02 Score=22.44 Aligned_cols=80 Identities=15% Similarity=0.066 Sum_probs=48.6
Q ss_pred CceEEEEEc-CCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 3 VKVRFIVGG-DGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 3 p~~~lvi~G-~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
...+..+.| .|.+-..+.+.++.-+ ..+.+.+....- .-+..+|++|-=|..+..--.+--+...|+|+|..-.
T Consensus 11 ~~~~~~v~Ga~GrMG~~i~~~~~~~~----~elv~~id~~~~-~~l~~~DVvIDFT~P~a~~~~~~~~~~~g~~~ViGTT 85 (228)
T 1vm6_A 11 HHMKYGIVGYSGRMGQEIQKVFSEKG----HELVLKVDVNGV-EELDSPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTT 85 (228)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT----CEEEEEEETTEE-EECSCCSEEEECSCGGGHHHHHHHHHHHTCEEEECCC
T ss_pred ccceeEEEEecCHHHHHHHHHHhCCC----CEEEEEEcCCCc-ccccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEeCC
Confidence 356677777 4777777777665433 233333311100 1113689999666666665566678899999998776
Q ss_pred CCcccc
Q 027511 82 GGVPEV 87 (222)
Q Consensus 82 gg~~e~ 87 (222)
|...+.
T Consensus 86 G~~~~~ 91 (228)
T 1vm6_A 86 ALKEEH 91 (228)
T ss_dssp SCCHHH
T ss_pred CCCHHH
Confidence 755543
No 216
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=30.11 E-value=75 Score=25.81 Aligned_cols=105 Identities=7% Similarity=0.018 Sum_probs=58.6
Q ss_pred eEEEEEcCCccHHHHHHHHHHc---CCCCcEE---EeCCCChhHHHHHHHhccEEEEc---CCCccccHHHHHHHHhC--
Q 027511 5 VRFIVGGDGPKRVRLEEMREKH---SLQDRVE---MLGAVPHAQVRSVLISGHIFLNS---SLTEAFCIAILEAASCG-- 73 (222)
Q Consensus 5 ~~lvi~G~g~~~~~l~~~~~~~---~l~~~V~---~~g~v~~~~~~~ll~~adv~v~~---s~~E~~g~~ilEAma~G-- 73 (222)
-+++|++.|.......+.++.+ |+.-.|. .+-.++.+.+.+.++..+-+|.. +..-++|..+.+.++-.
T Consensus 202 ~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vvvvEe~~~~Gg~g~~v~~~l~~~~~ 281 (324)
T 1w85_B 202 KDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAI 281 (324)
T ss_dssp SSEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSEEESCCHHHHHHHHHHHSCEEEEEEEETTSSSHHHHHHHHHHHHG
T ss_pred CCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEeeeecCCCHHHHHHHHhhCCcEEEEeCCCcCChHHHHHHHHHHhhCc
Confidence 3567888887776666555544 5443333 34455777788888776543322 23556777777765432
Q ss_pred ----CcEEEeCCCCccccccCCceE--EeCCCHHHHHHHHHHHHh
Q 027511 74 ----LLTVSTRVGGVPEVLPDDMVV--LAEPDPGDMVLAIRKAIS 112 (222)
Q Consensus 74 ----~PvVa~~~gg~~e~i~~~~~g--~~~~~~~~la~~i~~ll~ 112 (222)
.|+..- |.....++.+. . ..-.+++.+++++.++++
T Consensus 282 ~~l~~~v~~v--g~~d~~~~~~~-l~~~~gl~~~~I~~~i~~~l~ 323 (324)
T 1w85_B 282 LSLEAPVLRV--AAPDTVYPFAQ-AESVWLPNFKDVIETAKKVMN 323 (324)
T ss_dssp GGCSSCCEEE--EECSSSSCCGG-GHHHHSCCHHHHHHHHHHHHT
T ss_pred cccCCCeEEE--ecCCcCCCcHH-HHHHhCcCHHHHHHHHHHHhh
Confidence 455321 11112222222 1 123488999999988764
No 217
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=30.10 E-value=52 Score=28.33 Aligned_cols=78 Identities=14% Similarity=0.063 Sum_probs=53.0
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh------------hHHHHHHHhccEEEEcCCCcc-ccHHHHHH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH------------AQVRSVLISGHIFLNSSLTEA-FCIAILEA 69 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~------------~~~~~ll~~adv~v~~s~~E~-~g~~ilEA 69 (222)
.+-++.|+|-|..-..+.+.++.+|. +|.+...-+. .++.+++..+|+++.++.+.+ +.-..++.
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga--~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVilt~gt~~iI~~e~l~~ 287 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGA--RVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVTTTGNDDIITSEHFPR 287 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCTTTGGG
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEECCCCcCccCHHHHhh
Confidence 35678999999888888888888875 5776654221 246778889999987665432 34455667
Q ss_pred HHhCCcEEEeCCC
Q 027511 70 ASCGLLTVSTRVG 82 (222)
Q Consensus 70 ma~G~PvVa~~~g 82 (222)
|.-|.-+|....|
T Consensus 288 MK~gAIVINvgRg 300 (436)
T 3h9u_A 288 MRDDAIVCNIGHF 300 (436)
T ss_dssp CCTTEEEEECSSS
T ss_pred cCCCcEEEEeCCC
Confidence 7777655554433
No 218
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=29.95 E-value=88 Score=25.59 Aligned_cols=81 Identities=11% Similarity=0.198 Sum_probs=53.8
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC-----------ChhHHHHHHHhccEEEE-cCC-Ccc---ccHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV-----------PHAQVRSVLISGHIFLN-SSL-TEA---FCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v-----------~~~~~~~ll~~adv~v~-~s~-~E~---~g~~il 67 (222)
+-++-|+|-|..-..+.+.++..|. +|.....- ...++.++++.||+++. .+. .++ ++-..+
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l 217 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHFGM--KVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRF 217 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTT
T ss_pred cceEEEEEECHHHHHHHHHHHhCCC--EEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHH
Confidence 4578999999888888888888775 35543321 23578899999999764 222 222 334556
Q ss_pred HHHHhCCcEEEeCCCCccc
Q 027511 68 EAASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 68 EAma~G~PvVa~~~gg~~e 86 (222)
..|--|.-+|-+..|++.+
T Consensus 218 ~~mk~gailIN~aRG~~vd 236 (324)
T 3hg7_A 218 EHCKPGAILFNVGRGNAIN 236 (324)
T ss_dssp TCSCTTCEEEECSCGGGBC
T ss_pred hcCCCCcEEEECCCchhhC
Confidence 6677777777666666543
No 219
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=29.70 E-value=1.1e+02 Score=19.58 Aligned_cols=24 Identities=17% Similarity=0.184 Sum_probs=13.0
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcC
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHS 27 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~ 27 (222)
..++.|+|.|..-..+-+...+.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g 28 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS 28 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC
Confidence 346667776655554444444444
No 220
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=29.43 E-value=1.5e+02 Score=24.49 Aligned_cols=80 Identities=14% Similarity=0.065 Sum_probs=54.3
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC------------hhHHHHHHHhccEEEE-cCC-Cc---cccHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP------------HAQVRSVLISGHIFLN-SSL-TE---AFCIAI 66 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~------------~~~~~~ll~~adv~v~-~s~-~E---~~g~~i 66 (222)
+-++-|+|-|..-..+.+.++..|. +|.....-+ .+++.+++.++|+++. .+. .+ -++-..
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~ 237 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGM--NVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVAD 237 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHH
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCC--EEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHH
Confidence 4578999999888888888887775 455443211 1267889999999764 222 22 345577
Q ss_pred HHHHHhCCcEEEeCCCCcc
Q 027511 67 LEAASCGLLTVSTRVGGVP 85 (222)
Q Consensus 67 lEAma~G~PvVa~~~gg~~ 85 (222)
+..|--|.-+|-+..|++.
T Consensus 238 l~~mk~gailIN~aRg~~v 256 (352)
T 3gg9_A 238 LTRMKPTALFVNTSRAELV 256 (352)
T ss_dssp HTTSCTTCEEEECSCGGGB
T ss_pred HhhCCCCcEEEECCCchhh
Confidence 7778888888877666544
No 221
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=29.18 E-value=1.6e+02 Score=25.70 Aligned_cols=79 Identities=10% Similarity=-0.020 Sum_probs=55.8
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh------------hHHHHHHHhccEEEEcCCCc-cccHHHHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH------------AQVRSVLISGHIFLNSSLTE-AFCIAILEAA 70 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~------------~~~~~ll~~adv~v~~s~~E-~~g~~ilEAm 70 (222)
.-++.|+|-|..-..+.+.+..+|. +|.....-+. .++.+++..+|+++....+. -+.-..+..|
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~G~--~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~M 354 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGLGA--TVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINHDHMKAM 354 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECSSSSCSBCHHHHHHC
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC--EEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECCCcccccCHHHHhhC
Confidence 4578999999888888888877764 5666554321 23677889999998775433 3556778888
Q ss_pred HhCCcEEEeCCCCc
Q 027511 71 SCGLLTVSTRVGGV 84 (222)
Q Consensus 71 a~G~PvVa~~~gg~ 84 (222)
--|.-+|-...|+.
T Consensus 355 K~gAilINvgrg~v 368 (494)
T 3d64_A 355 RHNAIVCNIGHFDS 368 (494)
T ss_dssp CTTEEEEECSSSSC
T ss_pred CCCcEEEEcCCCcc
Confidence 88887776666655
No 222
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=28.79 E-value=2e+02 Score=25.01 Aligned_cols=79 Identities=11% Similarity=0.067 Sum_probs=52.1
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChh------------HHHHHHHhccEEEEcCCCcc-ccHHHHHH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHA------------QVRSVLISGHIFLNSSLTEA-FCIAILEA 69 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~------------~~~~ll~~adv~v~~s~~E~-~g~~ilEA 69 (222)
+.-++.|+|-|..-..+.+.++.+|. +|.....-+.. ++.+++..+|+++.+.-+.. +.-..++.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga--~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atgt~~~i~~~~l~~ 350 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGA--RVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKA 350 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSSSSCSBCHHHHHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCCCHHHHHHHHHHh
Confidence 35578999999888888888887774 56665542211 23456778999887655433 55567788
Q ss_pred HHhCCcEEEeCCCC
Q 027511 70 ASCGLLTVSTRVGG 83 (222)
Q Consensus 70 ma~G~PvVa~~~gg 83 (222)
|.-|.-++....++
T Consensus 351 mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 351 MKDHAILGNIGHFD 364 (494)
T ss_dssp SCTTCEEEECSSSG
T ss_pred cCCCcEEEEeCCCC
Confidence 87776666544443
No 223
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=28.36 E-value=1.8e+02 Score=23.72 Aligned_cols=81 Identities=9% Similarity=0.069 Sum_probs=52.3
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh-----------hHHHHHHHhccEEEEc-CCC-cc---ccHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH-----------AQVRSVLISGHIFLNS-SLT-EA---FCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~-----------~~~~~ll~~adv~v~~-s~~-E~---~g~~il 67 (222)
+-++-|+|-|..-..+.+.++..|. +|.....-+. .++.+++..+|+++.. +.+ ++ ++-..+
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l 242 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSFGM--KTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTF 242 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHH
T ss_pred cCEEEEEeECHHHHHHHHHHHHCCC--EEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHH
Confidence 4578899999888888888877764 4655443211 2466788899997652 332 22 344577
Q ss_pred HHHHhCCcEEEeCCCCccc
Q 027511 68 EAASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 68 EAma~G~PvVa~~~gg~~e 86 (222)
..|.-|.-+|-+..|++.+
T Consensus 243 ~~mk~gailIN~arg~vvd 261 (335)
T 2g76_A 243 AQCKKGVRVVNCARGGIVD 261 (335)
T ss_dssp TTSCTTEEEEECSCTTSBC
T ss_pred hhCCCCcEEEECCCccccC
Confidence 7777777777666665543
No 224
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=28.20 E-value=83 Score=22.68 Aligned_cols=51 Identities=18% Similarity=0.336 Sum_probs=34.6
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEc
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNS 56 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~ 56 (222)
.+.-+++.||++....++.+.+++|. +|...|.- ..--..+.+.||-|+..
T Consensus 109 ~d~~vLvSgD~DF~plv~~lr~~~G~--~V~v~g~~-~~~s~~L~~~ad~fi~l 159 (165)
T 2qip_A 109 VDRVILVSGDGDFSLLVERIQQRYNK--KVTVYGVP-RLTSQTLIDCADNFVAI 159 (165)
T ss_dssp CSEEEEECCCGGGHHHHHHHHHHHCC--EEEEEECG-GGSCHHHHHHSSEEEEC
T ss_pred CCEEEEEECChhHHHHHHHHHHHcCc--EEEEEeCC-CcChHHHHHhCCEEEec
Confidence 35567777999877777777665664 68777752 11225677889988754
No 225
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=27.97 E-value=2.4e+02 Score=22.84 Aligned_cols=79 Identities=10% Similarity=0.069 Sum_probs=50.4
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh-----------hHHHHHHHhccEEEEc-CCC-c---cccHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH-----------AQVRSVLISGHIFLNS-SLT-E---AFCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~-----------~~~~~ll~~adv~v~~-s~~-E---~~g~~il 67 (222)
+.++-|+|-|..-..+.+.+...|. +|.....-+. .++.+++..+|+++.. +.. + -+.-..+
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~ 223 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFGV--KLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERV 223 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTC--EEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCC--EEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHH
Confidence 4578899999888888877777764 4655543221 1356778899997653 222 2 2344567
Q ss_pred HHHHhCCcEEEeCCCCcc
Q 027511 68 EAASCGLLTVSTRVGGVP 85 (222)
Q Consensus 68 EAma~G~PvVa~~~gg~~ 85 (222)
..|.-| .+|.+..|++.
T Consensus 224 ~~mk~g-ilin~srg~~v 240 (333)
T 2d0i_A 224 KKLEGK-YLVNIGRGALV 240 (333)
T ss_dssp HHTBTC-EEEECSCGGGB
T ss_pred hhCCCC-EEEECCCCccc
Confidence 778778 66665555544
No 226
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=27.96 E-value=1.4e+02 Score=20.12 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=67.0
Q ss_pred ceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHH-----------hccEEEEc-CCCccccHHHHHHH
Q 027511 4 KVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLI-----------SGHIFLNS-SLTEAFCIAILEAA 70 (222)
Q Consensus 4 ~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~-----------~adv~v~~-s~~E~~g~~ilEAm 70 (222)
..+++|+.+.+ ....++...++.+....|..... .++....+. ..|+++.- ...+.-|..+++.+
T Consensus 4 ~~~ILivddd~~~~~~l~~~L~~~g~~~~v~~~~~--~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~l 81 (152)
T 3heb_A 4 SVTIVMIEDDLGHARLIEKNIRRAGVNNEIIAFTD--GTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLV 81 (152)
T ss_dssp -CEEEEECCCHHHHHHHHHHHHHTTCCCCEEEESS--HHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHhCCCcceEEEeCC--HHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHH
Confidence 46788887654 34677777888776545666554 567767664 35676653 33456678888877
Q ss_pred Hh-----CCcEEEeCCCCc----cccccCCceEE-eCC-CHHHHHHHHHHHHhc
Q 027511 71 SC-----GLLTVSTRVGGV----PEVLPDDMVVL-AEP-DPGDMVLAIRKAISL 113 (222)
Q Consensus 71 a~-----G~PvVa~~~gg~----~e~i~~~~~g~-~~~-~~~~la~~i~~ll~~ 113 (222)
.. ++|+|....... .+.+..+..++ .-| +++++.++|.++...
T Consensus 82 r~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 135 (152)
T 3heb_A 82 KENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLGLF 135 (152)
T ss_dssp HHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred HhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHHH
Confidence 65 567774332222 22344554443 334 889999999988764
No 227
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=27.90 E-value=2.6e+02 Score=23.23 Aligned_cols=83 Identities=6% Similarity=0.068 Sum_probs=47.1
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC----------------ChhHHHHHHHhccEEEEcCCC-cc-ccH
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV----------------PHAQVRSVLISGHIFLNSSLT-EA-FCI 64 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v----------------~~~~~~~ll~~adv~v~~s~~-E~-~g~ 64 (222)
++-++.|+|.|..-..+-+.+...|.. +|.....- +.+++.+++..+|+++.+.-. .+ .+-
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~-~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~~~~~~ 244 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVR-AVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIHV 244 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBCH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCCceecH
Confidence 455788888887666666655555542 34443321 224566777889998876542 22 223
Q ss_pred HHHHH-H---HhCCcEEEeCCCCccc
Q 027511 65 AILEA-A---SCGLLTVSTRVGGVPE 86 (222)
Q Consensus 65 ~ilEA-m---a~G~PvVa~~~gg~~e 86 (222)
..++. + .-|.+++.-+.+.+.+
T Consensus 245 ~~l~~~~lk~r~~~~~v~vdia~P~~ 270 (404)
T 1gpj_A 245 DDVREALRKRDRRSPILIIDIANPRD 270 (404)
T ss_dssp HHHHHHHHHCSSCCCEEEEECCSSCS
T ss_pred HHHHHHHHhccCCCCEEEEEccCCCC
Confidence 55665 3 2255666666655443
No 228
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=27.80 E-value=2e+02 Score=22.56 Aligned_cols=75 Identities=9% Similarity=0.056 Sum_probs=44.5
Q ss_pred CcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCCCCcccccc-------CCceE--EeCCCH
Q 027511 30 DRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRVGGVPEVLP-------DDMVV--LAEPDP 100 (222)
Q Consensus 30 ~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~-------~~~~g--~~~~~~ 100 (222)
+.|.+...++.+++..+=...=..+.+......+-+.+=|-+.|+|+|..- ++..+.+. ++..| +..|++
T Consensus 155 ~~ILVa~~l~Ps~~~~l~~~~~~givt~~Gg~tSH~AIlAR~lgIPavvg~-~~~~~~~~~G~~v~vDg~~G~v~~~p~~ 233 (258)
T 1zym_A 155 EVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGT-GSVTSQVKNDDYLILDAVNNQVYVNPTN 233 (258)
T ss_dssp CEEEECSCCCHHHHHHSCGGGEEEEECSCCCSSSHHHHHHHHHTCCEECCC-SCHHHHCCTTCEEEECCSSCCEEESCCH
T ss_pred CeEEEECCCCHHHHHhhchhhcEEEEEcCCCcccHHHHHHHHcCCCEEEec-hhHHHhCCCCCEEEEECCCCeEEECcCH
Confidence 345566677767666553222335666666666777888999999999743 23333333 33333 566676
Q ss_pred HHHHH
Q 027511 101 GDMVL 105 (222)
Q Consensus 101 ~~la~ 105 (222)
+.+.+
T Consensus 234 ~~~~~ 238 (258)
T 1zym_A 234 EVIDK 238 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 229
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=27.78 E-value=1e+02 Score=22.24 Aligned_cols=70 Identities=20% Similarity=0.184 Sum_probs=38.3
Q ss_pred EEEEEcCCccHHH---HHHHHHHcCCCCcEEEeCCCChhHHH---HHHHhccEEEEcCCCcccc--HHH-HHHHHhCCcE
Q 027511 6 RFIVGGDGPKRVR---LEEMREKHSLQDRVEMLGAVPHAQVR---SVLISGHIFLNSSLTEAFC--IAI-LEAASCGLLT 76 (222)
Q Consensus 6 ~lvi~G~g~~~~~---l~~~~~~~~l~~~V~~~g~v~~~~~~---~ll~~adv~v~~s~~E~~g--~~i-lEAma~G~Pv 76 (222)
++++.|.|....- +.......+. ++.+...- ..+.. ..+..-|+++.-|...... +.+ -.|-..|.++
T Consensus 41 ~I~i~G~G~S~~~a~~~~~~l~~~g~--~~~~~~~~-~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~v 117 (187)
T 3sho_A 41 HVIVVGMGFSAAVAVFLGHGLNSLGI--RTTVLTEG-GSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPT 117 (187)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHTTC--CEEEECCC-THHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCE
T ss_pred EEEEEecCchHHHHHHHHHHHHhcCC--CEEEecCC-chhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCE
Confidence 6888998876643 3333444454 46665521 12332 3334568888777643222 222 3344679999
Q ss_pred EE
Q 027511 77 VS 78 (222)
Q Consensus 77 Va 78 (222)
|+
T Consensus 118 i~ 119 (187)
T 3sho_A 118 MA 119 (187)
T ss_dssp EE
T ss_pred EE
Confidence 84
No 230
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=27.75 E-value=2.3e+02 Score=23.33 Aligned_cols=82 Identities=16% Similarity=0.150 Sum_probs=50.5
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC------------------------------------------h
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP------------------------------------------H 40 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~------------------------------------------~ 40 (222)
+..+++|+|.|..-....+.++.+|. +|.....-+ .
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga--~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA--VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 45678999998877777777777774 354433211 0
Q ss_pred hHHHHHHHhccEEEEcCCCc---c---ccHHHHHHHHhCCcEEEeC--CCCccc
Q 027511 41 AQVRSVLISGHIFLNSSLTE---A---FCIAILEAASCGLLTVSTR--VGGVPE 86 (222)
Q Consensus 41 ~~~~~ll~~adv~v~~s~~E---~---~g~~ilEAma~G~PvVa~~--~gg~~e 86 (222)
+.+.+++..+|+++.++... . +.-..++.|.-|..+|-.. .||..+
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~ 302 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP 302 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCee
Confidence 11566778899999887432 2 2345667777676666333 444433
No 231
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=27.72 E-value=11 Score=19.56 Aligned_cols=30 Identities=37% Similarity=0.543 Sum_probs=16.2
Q ss_pred eEEEEEcCCccH-HHHHHHHHHcCCCCcEEEeC
Q 027511 5 VRFIVGGDGPKR-VRLEEMREKHSLQDRVEMLG 36 (222)
Q Consensus 5 ~~lvi~G~g~~~-~~l~~~~~~~~l~~~V~~~g 36 (222)
++-+.+|+.|.. ..+++-+++.++ +|.|.|
T Consensus 5 vrtiwvggtpeelkklkeeakkani--rvtfwg 35 (36)
T 2ki0_A 5 VRTIWVGGTPEELKKLKEEAKKANI--RVTFWG 35 (36)
T ss_dssp CCCCCBCCCHHHHHHHHHHHHHHCC--CCCBCC
T ss_pred eEEEEecCCHHHHHHHHHHHHhccE--EEEeec
Confidence 444556654432 455555666554 577765
No 232
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=27.38 E-value=40 Score=26.99 Aligned_cols=99 Identities=13% Similarity=0.076 Sum_probs=59.5
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEe------CCCChhHHHHHHHhccEEEEcCC---CccccHHHHHHHHhC
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEML------GAVPHAQVRSVLISGHIFLNSSL---TEAFCIAILEAASCG 73 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~------g~v~~~~~~~ll~~adv~v~~s~---~E~~g~~ilEAma~G 73 (222)
++-++.++|--|.-.++.+ + + .++..+ |..+.+....++..||+.+.|.. ..++. .+++....+
T Consensus 140 ~g~kV~vIG~~P~i~~~l~---~-~--~~v~V~d~~p~~g~~p~~~~e~ll~~aD~viiTGsTlvN~Ti~-~lL~~~~~a 212 (270)
T 2h1q_A 140 KGKKVGVVGHFPHLESLLE---P-I--CDLSILEWSPEEGDYPLPASEFILPECDYVYITCASVVDKTLP-RLLELSRNA 212 (270)
T ss_dssp TTSEEEEESCCTTHHHHHT---T-T--SEEEEEESSCCTTCEEGGGHHHHGGGCSEEEEETHHHHHTCHH-HHHHHTTTS
T ss_pred CCCEEEEECCCHHHHHHHh---C-C--CCEEEEECCCCCCCCChHHHHHHhhcCCEEEEEeeeeecCCHH-HHHHhCccC
Confidence 4568899998664433222 2 1 122222 33445667778999999998876 34444 355555444
Q ss_pred CcEE--EeCCCCccccccCCc---eEEeCCCHHHHHHHHH
Q 027511 74 LLTV--STRVGGVPEVLPDDM---VVLAEPDPGDMVLAIR 108 (222)
Q Consensus 74 ~PvV--a~~~gg~~e~i~~~~---~g~~~~~~~~la~~i~ 108 (222)
.++| .+..+-.+++...+. .|+...|++.+.+.|.
T Consensus 213 ~~vvl~GPS~p~~P~lf~~Gv~~l~G~~V~D~~~~~~~i~ 252 (270)
T 2h1q_A 213 RRITLVGPGTPLAPVLFEHGLQELSGFMVKDNARAFRIVA 252 (270)
T ss_dssp SEEEEESTTCCCCGGGGGTTCSEEEEEEESCHHHHHHHHT
T ss_pred CeEEEEecChhhhHHHHhcCcCEEEEeEecCHHHHHHHHH
Confidence 4444 444566777776553 3566778888777665
No 233
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=26.58 E-value=1e+02 Score=20.61 Aligned_cols=50 Identities=10% Similarity=0.131 Sum_probs=31.3
Q ss_pred EEEEcCCccH-----HHHHHHHHHcCCC-CcEEEeCCCChhHHHHHHHhccEEEEcCCC
Q 027511 7 FIVGGDGPKR-----VRLEEMREKHSLQ-DRVEMLGAVPHAQVRSVLISGHIFLNSSLT 59 (222)
Q Consensus 7 lvi~G~g~~~-----~~l~~~~~~~~l~-~~V~~~g~v~~~~~~~ll~~adv~v~~s~~ 59 (222)
++++|.|-.. ..+++.+++.+++ ..|.-. +-.++...+..+|+++.+...
T Consensus 22 lvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~---~~~~~~~~~~~~DlIi~t~~l 77 (110)
T 3czc_A 22 LTACGNGMGSSMVIKMKVENALRQLGVSDIESASC---SVGEAKGLASNYDIVVASNHL 77 (110)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE---CHHHHHHHGGGCSEEEEETTT
T ss_pred EEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEe---eHHHHhhccCCCcEEEECCch
Confidence 3445565322 4666777887775 233333 346777777889998887653
No 234
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=26.54 E-value=58 Score=22.22 Aligned_cols=68 Identities=12% Similarity=-0.029 Sum_probs=43.5
Q ss_pred HHHHhccEEEEcCCCc-----cccHHHHHHHHhCCcEEEeCCCCccc---cccCCceEEeCCCHHHHHHHHHHHHh
Q 027511 45 SVLISGHIFLNSSLTE-----AFCIAILEAASCGLLTVSTRVGGVPE---VLPDDMVVLAEPDPGDMVLAIRKAIS 112 (222)
Q Consensus 45 ~ll~~adv~v~~s~~E-----~~g~~ilEAma~G~PvVa~~~gg~~e---~i~~~~~g~~~~~~~~la~~i~~ll~ 112 (222)
.-++.++++|..+-.. ..-.-+-.|-..|+|+|+-..-|..+ -+.+...-.+.=+.+.+.++|...++
T Consensus 34 ~~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~P~~l~~~a~~iV~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 34 ATPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENVPPELEAVSSEVVGWNPHCIRDALEDALD 109 (111)
T ss_dssp CCSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCCCTTHHHHCSEEECSCHHHHHHHHHHHHC
T ss_pred CccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcCCHHHHhhCceeccCCHHHHHHHHHhccC
Confidence 5667789877544322 23344566778999999888766532 22222223455588999999988764
No 235
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=26.51 E-value=1.5e+02 Score=19.81 Aligned_cols=109 Identities=9% Similarity=0.158 Sum_probs=66.2
Q ss_pred CceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEc-CCCccccHHHHHHHHh-----C
Q 027511 3 VKVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNS-SLTEAFCIAILEAASC-----G 73 (222)
Q Consensus 3 p~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~-s~~E~~g~~ilEAma~-----G 73 (222)
...+++|+.+.+ ....+....+..+. .|..... .++....+.. .|+++.- ...+.-|..+++.+.. .
T Consensus 7 ~~~~iLivd~~~~~~~~l~~~L~~~g~--~v~~~~~--~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ 82 (147)
T 2zay_A 7 KWWRIMLVDTQLPALAASISALSQEGF--DIIQCGN--AIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTAS 82 (147)
T ss_dssp -CEEEEEECTTGGGGHHHHHHHHHHTE--EEEEESS--HHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTT
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHcCC--eEEEeCC--HHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCC
Confidence 356788888654 45677777776654 3554443 4666666654 5776653 3345567888888764 5
Q ss_pred CcEEE-eCCCCc---cccccCCceEE-eCC-CHHHHHHHHHHHHhcCC
Q 027511 74 LLTVS-TRVGGV---PEVLPDDMVVL-AEP-DPGDMVLAIRKAISLLP 115 (222)
Q Consensus 74 ~PvVa-~~~gg~---~e~i~~~~~g~-~~~-~~~~la~~i~~ll~~~~ 115 (222)
+|+|. +..... .+.+..+..++ .-| +.+++..+|..++...+
T Consensus 83 ~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~~~~ 130 (147)
T 2zay_A 83 IPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRVLKLLY 130 (147)
T ss_dssp SCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 77774 333322 12233444443 334 88999999999987643
No 236
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=26.28 E-value=2.2e+02 Score=21.86 Aligned_cols=66 Identities=8% Similarity=0.004 Sum_probs=38.2
Q ss_pred HHHHHHHHcCCCCcEEE-eCCCChhHHHHHHHhccEEEEcCCCccccHHHHH-HHHhCCcEEEeCCCC
Q 027511 18 RLEEMREKHSLQDRVEM-LGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILE-AASCGLLTVSTRVGG 83 (222)
Q Consensus 18 ~l~~~~~~~~l~~~V~~-~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilE-Ama~G~PvVa~~~gg 83 (222)
.+.+...+..-.-+|.. ...++.+++.+++..+|++|.+......-..+.+ +...|+|+|.....|
T Consensus 89 ~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g 156 (249)
T 1jw9_B 89 SARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIR 156 (249)
T ss_dssp HHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEB
T ss_pred HHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeecc
Confidence 33343443322223443 4556666788899999999987753222222333 345799999765443
No 237
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=25.91 E-value=39 Score=27.08 Aligned_cols=101 Identities=14% Similarity=0.040 Sum_probs=60.0
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcC---CCCcEEEeCCCChhHHHHHHHhccEEEEcCC---CccccHHHHHHHHhCCcE-
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHS---LQDRVEMLGAVPHAQVRSVLISGHIFLNSSL---TEAFCIAILEAASCGLLT- 76 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~---l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~---~E~~g~~ilEAma~G~Pv- 76 (222)
+-++.++|.-|.-+.+.+...++- ... -.|..|.++-..++..||+.+.|.. ..++. .++|..--+..|
T Consensus 141 g~kV~vIG~fP~i~~~~~~~~~l~V~E~~p---~~g~~p~~~~~~~lp~~D~viiTgstlvN~Tl~-~lL~~~~~a~~vv 216 (270)
T 3l5o_A 141 GKKVGVVGHFPHLESLLEPICDLSILEWSP---EEGDYPLPASEFILPECDYVYITCASVVDKTLP-RLLELSRNARRIT 216 (270)
T ss_dssp TSEEEEESCCTTHHHHHTTTSEEEEEESSC---CTTCEEGGGHHHHGGGCSEEEEETHHHHHTCHH-HHHHHTTTSSEEE
T ss_pred CCEEEEECCchhHHHHHhcCCCEEEEECCC---CCCCCChhHHHHhhccCCEEEEEeehhhcCCHH-HHHhhCCCCCEEE
Confidence 347889997765544443322110 111 1234456677889999999988776 33333 455555445444
Q ss_pred -EEeCCCCccccccCCc---eEEeCCCHHHHHHHHH
Q 027511 77 -VSTRVGGVPEVLPDDM---VVLAEPDPGDMVLAIR 108 (222)
Q Consensus 77 -Va~~~gg~~e~i~~~~---~g~~~~~~~~la~~i~ 108 (222)
+.+..+-.+++...+. .|+...|++.+.+.+.
T Consensus 217 l~GPStp~~P~lf~~Gv~~laG~~V~d~~~~~~~i~ 252 (270)
T 3l5o_A 217 LVGPGTPLAPVLFEHGLQELSGFMVKDNARAFRIVA 252 (270)
T ss_dssp EESTTCCCCGGGGGTTCSEEEEEEESCHHHHHHHHT
T ss_pred EECCCchhhHHHHhcCcCEEEEEEEcCHHHHHHHHh
Confidence 3555666778776653 3566778877776664
No 238
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=25.64 E-value=2.2e+02 Score=23.50 Aligned_cols=74 Identities=11% Similarity=0.162 Sum_probs=46.9
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC--------------------ChhHHHHHHHhccEEEEcCCCcc-
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV--------------------PHAQVRSVLISGHIFLNSSLTEA- 61 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v--------------------~~~~~~~ll~~adv~v~~s~~E~- 61 (222)
+.-++.|+|.|..-....+.+..+|. +|.....- ..+++.+++..+|+++.+.....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga--~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA--TVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 34578888888777777777777765 35443321 23456677889999998543221
Q ss_pred -----ccHHHHHHHHhCCcEEE
Q 027511 62 -----FCIAILEAASCGLLTVS 78 (222)
Q Consensus 62 -----~g~~ilEAma~G~PvVa 78 (222)
+.-..++.|.-|.-+|-
T Consensus 245 ~t~~li~~~~l~~mk~g~~iV~ 266 (377)
T 2vhw_A 245 KAPKLVSNSLVAHMKPGAVLVD 266 (377)
T ss_dssp CCCCCBCHHHHTTSCTTCEEEE
T ss_pred CCcceecHHHHhcCCCCcEEEE
Confidence 24556677776666663
No 239
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=25.57 E-value=2.6e+02 Score=22.32 Aligned_cols=31 Identities=10% Similarity=-0.118 Sum_probs=21.3
Q ss_pred hccEEEEcCCCccccHHHHHHHHhCCcEEEe
Q 027511 49 SGHIFLNSSLTEAFCIAILEAASCGLLTVST 79 (222)
Q Consensus 49 ~adv~v~~s~~E~~g~~ilEAma~G~PvVa~ 79 (222)
..|+++.++-...-.-.+..|+..|++|++=
T Consensus 73 ~vD~V~I~tP~~~H~~~~~~al~aGkhVl~E 103 (318)
T 3oa2_A 73 ALDYVSICSPNYLHYPHIAAGLRLGCDVICE 103 (318)
T ss_dssp SCCEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCcEEEECCCcHHHHHHHHHHHHCCCeEEEE
Confidence 3577666555444445667899999999863
No 240
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=25.57 E-value=2.2e+02 Score=22.90 Aligned_cols=79 Identities=18% Similarity=0.230 Sum_probs=50.2
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCC-CCh------------hHHHHHHHhccEEEEc-CCC-c---cccHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGA-VPH------------AQVRSVLISGHIFLNS-SLT-E---AFCIA 65 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~-v~~------------~~~~~ll~~adv~v~~-s~~-E---~~g~~ 65 (222)
.-++-|+|-|..-..+.+.+...|. +|..... -+. +++.+++..+|+++.. +.+ + -++-.
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGFDM--DIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC--EEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHH
Confidence 4578899999888888887777664 4665554 221 1567888999987653 222 2 23344
Q ss_pred HHHHHHhCCcEEEeCCCCc
Q 027511 66 ILEAASCGLLTVSTRVGGV 84 (222)
Q Consensus 66 ilEAma~G~PvVa~~~gg~ 84 (222)
.+..|.-|.-+|.+..|++
T Consensus 224 ~l~~mk~gailIn~arg~~ 242 (320)
T 1gdh_A 224 TIKSLPQGAIVVNTARGDL 242 (320)
T ss_dssp HHTTSCTTEEEEECSCGGG
T ss_pred HHhhCCCCcEEEECCCCcc
Confidence 5666666766665555544
No 241
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=25.56 E-value=2.7e+02 Score=22.53 Aligned_cols=81 Identities=10% Similarity=0.086 Sum_probs=52.9
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCCh-----------hHHHHHHHhccEEEEc-CC-C---ccccHHHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPH-----------AQVRSVLISGHIFLNS-SL-T---EAFCIAIL 67 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~-----------~~~~~ll~~adv~v~~-s~-~---E~~g~~il 67 (222)
..++-|+|-|..-..+.+.+...|. +|.....-+. .++.+++..+|+++.. +. . .-+.-.++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~ 227 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNM--RILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERL 227 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCC--EEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHH
Confidence 4578899999888888887777764 4665543321 2456788999997653 22 2 12334567
Q ss_pred HHHHhCCcEEEeCCCCccc
Q 027511 68 EAASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 68 EAma~G~PvVa~~~gg~~e 86 (222)
+.|.-|..+|.+..|++.+
T Consensus 228 ~~mk~~ailIn~srg~~v~ 246 (334)
T 2dbq_A 228 KLMKKTAILINIARGKVVD 246 (334)
T ss_dssp HHSCTTCEEEECSCGGGBC
T ss_pred hcCCCCcEEEECCCCcccC
Confidence 7777787777666665443
No 242
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=25.54 E-value=1.5e+02 Score=21.97 Aligned_cols=65 Identities=8% Similarity=-0.048 Sum_probs=36.4
Q ss_pred eEEEEEcCC-ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 5 VRFIVGGDG-PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 5 ~~lvi~G~g-~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
+.+.+.|-. ..+..+.++++.+|- .+...++ ..+.=+|.......-..+.+.|++.|+++|..++
T Consensus 3 ~vi~~sg~~~~~~~~l~~~~~~~G~----~~~~~~~--------~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~~W 68 (210)
T 2nte_A 3 LVLIGSGLSSEQQKMLSELAVILKA----KKYTEFD--------STVTHVVVPGDAVQSTLKCMLGILNGCWILKFEW 68 (210)
T ss_dssp CEEEESSCCHHHHHHHHHHHHHTTC----EEESSCC--------TTCCEEEESSSSCCCSHHHHHHHHTTCEEEETHH
T ss_pred EEEEECCCCHHHHHHHHHHHHHcCC----EEeCCCC--------CCCeEEEEcCCCcchHHHHHHHHhcCCEEecHHH
Confidence 334444522 344678888888874 2333332 1232233332112335678899999999997654
No 243
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=25.39 E-value=2.7e+02 Score=22.74 Aligned_cols=71 Identities=13% Similarity=0.246 Sum_probs=44.0
Q ss_pred eEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCC--------------------ChhHHHHHHHhccEEEEcCCCcc---
Q 027511 5 VRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAV--------------------PHAQVRSVLISGHIFLNSSLTEA--- 61 (222)
Q Consensus 5 ~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v--------------------~~~~~~~ll~~adv~v~~s~~E~--- 61 (222)
-+++|.|.|..-....+.+..+|. +|.....- +.+++.+.+..+|+++.+.....
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga--~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~ 245 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 245 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 467888888777777777777765 45543321 22455566778999998775433
Q ss_pred ---ccHHHHHHHHhCCcEE
Q 027511 62 ---FCIAILEAASCGLLTV 77 (222)
Q Consensus 62 ---~g~~ilEAma~G~PvV 77 (222)
..-..++.|.-|.-++
T Consensus 246 ~~li~~~~~~~~~~g~~iv 264 (361)
T 1pjc_A 246 PILVPASLVEQMRTGSVIV 264 (361)
T ss_dssp CCCBCHHHHTTSCTTCEEE
T ss_pred CeecCHHHHhhCCCCCEEE
Confidence 1334566676665554
No 244
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=24.65 E-value=2.4e+02 Score=21.71 Aligned_cols=67 Identities=6% Similarity=0.013 Sum_probs=39.4
Q ss_pred HHHHHHHHHcCCCCcEEE-eCCCChhHHHHHHHhccEEEEcCCCccccHHHHH-HHHhCCcEEEeCCCC
Q 027511 17 VRLEEMREKHSLQDRVEM-LGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILE-AASCGLLTVSTRVGG 83 (222)
Q Consensus 17 ~~l~~~~~~~~l~~~V~~-~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilE-Ama~G~PvVa~~~gg 83 (222)
+.+.+.+.+..-.-+|.. ...++.+.+..++..+|++|.+...-..-..+-+ +...|+|.|.....|
T Consensus 85 ~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g 153 (251)
T 1zud_1 85 QVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVG 153 (251)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEB
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccc
Confidence 444444444433334444 3456677888999999999987653221222222 335799999765433
No 245
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=24.21 E-value=1.6e+02 Score=19.44 Aligned_cols=108 Identities=15% Similarity=0.084 Sum_probs=64.9
Q ss_pred ceEEEEEcCCcc-HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--------ccEEEEc-CCCccccHHHHHHHH--
Q 027511 4 KVRFIVGGDGPK-RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--------GHIFLNS-SLTEAFCIAILEAAS-- 71 (222)
Q Consensus 4 ~~~lvi~G~g~~-~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--------adv~v~~-s~~E~~g~~ilEAma-- 71 (222)
..+++|+.+.+. ...+....++.+....|..... .++....+.. .|+++.- ...+.-|..+++.+.
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~~~~v~~~~~--~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~~ 84 (143)
T 2qvg_A 7 KVDILYLEDDEVDIQSVERVFHKISSLIKIEIAKS--GNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRDD 84 (143)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHCTTCCEEEESS--HHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTTS
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHhCCCceEEEECC--HHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHcC
Confidence 456788876543 4566777777765435666555 4666677754 5776653 334455777777775
Q ss_pred ---hCCcEEEe-CCCC---ccccccCCceEE-eCC-CHHHHHHHHHHHHhc
Q 027511 72 ---CGLLTVST-RVGG---VPEVLPDDMVVL-AEP-DPGDMVLAIRKAISL 113 (222)
Q Consensus 72 ---~G~PvVa~-~~gg---~~e~i~~~~~g~-~~~-~~~~la~~i~~ll~~ 113 (222)
..+|+|.. .... ..+.+..+..++ .-| +++++.+++......
T Consensus 85 ~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~~~~~~~~ 135 (143)
T 2qvg_A 85 SSFTDIEVFVLTAAYTSKDKLAFESLNIRGHLIKPLDYGEAIKLFWILQSM 135 (143)
T ss_dssp GGGTTCEEEEEESCCCHHHHHHHTTTTCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred ccccCCcEEEEeCCCCHHHHHHHHhcCCCeEEECCCCHHHHHHHHHHHHHh
Confidence 46787743 3222 223344554443 334 889999887765543
No 246
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=24.07 E-value=2.1e+02 Score=21.80 Aligned_cols=68 Identities=12% Similarity=0.248 Sum_probs=41.5
Q ss_pred hhHHHHHHHhccEEEEcCCCccccH--HHHHHHH------hCCcEEEeCCCCc-ccc-------ccCC-------ceEEe
Q 027511 40 HAQVRSVLISGHIFLNSSLTEAFCI--AILEAAS------CGLLTVSTRVGGV-PEV-------LPDD-------MVVLA 96 (222)
Q Consensus 40 ~~~~~~ll~~adv~v~~s~~E~~g~--~ilEAma------~G~PvVa~~~gg~-~e~-------i~~~-------~~g~~ 96 (222)
++....++..||.+|... -++|+ =++|+++ .++||+.-+..|+ ..+ +.++ .....
T Consensus 96 ~~Rk~~~~~~sda~I~lp--GG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~ 173 (216)
T 1ydh_A 96 HERKAAMAQEAEAFIALP--GGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVS 173 (216)
T ss_dssp HHHHHHHHHHCSEEEECS--CSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEE
T ss_pred HHHHHHHHHhCCEEEEeC--CCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEE
Confidence 455666778899988643 23442 2455553 6899999887542 222 2222 12356
Q ss_pred CCCHHHHHHHHHH
Q 027511 97 EPDPGDMVLAIRK 109 (222)
Q Consensus 97 ~~~~~~la~~i~~ 109 (222)
.+|++++.+.|.+
T Consensus 174 ~d~~ee~~~~l~~ 186 (216)
T 1ydh_A 174 APTAKELMEKMEE 186 (216)
T ss_dssp ESSHHHHHHHHHH
T ss_pred eCCHHHHHHHHHH
Confidence 6788888888775
No 247
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=24.00 E-value=1.2e+02 Score=23.24 Aligned_cols=68 Identities=10% Similarity=0.208 Sum_probs=39.6
Q ss_pred hHHHHHHHhccEEEEcCCCccccH--HHHHHHHh------CCcEEEeCCCCccc-c-------ccCC-------ceEEeC
Q 027511 41 AQVRSVLISGHIFLNSSLTEAFCI--AILEAASC------GLLTVSTRVGGVPE-V-------LPDD-------MVVLAE 97 (222)
Q Consensus 41 ~~~~~ll~~adv~v~~s~~E~~g~--~ilEAma~------G~PvVa~~~gg~~e-~-------i~~~-------~~g~~~ 97 (222)
....-+...||.+|... -++|+ -++|+++. ++||+.-+..|.-+ + +.++ ......
T Consensus 101 ~Rk~~~~~~sda~Vvlp--GG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~ 178 (215)
T 2a33_A 101 QRKAEMAKHSDAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSA 178 (215)
T ss_dssp HHHHHHHHTCSEEEECS--CCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHHTTEEEE
T ss_pred HHHHHHHHhCCEEEEeC--CCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHCCeEEEe
Confidence 34445667789887643 33443 24666665 89999888754321 1 1222 113456
Q ss_pred CCHHHHHHHHHHH
Q 027511 98 PDPGDMVLAIRKA 110 (222)
Q Consensus 98 ~~~~~la~~i~~l 110 (222)
+|++++.+.|.+.
T Consensus 179 d~~ee~~~~l~~~ 191 (215)
T 2a33_A 179 PTAKELVKKLEEY 191 (215)
T ss_dssp SSHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHh
Confidence 7888888877654
No 248
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=23.97 E-value=1.3e+02 Score=18.61 Aligned_cols=34 Identities=12% Similarity=0.277 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhcC
Q 027511 97 EPDPGDMVLAIRKAISLLP--KIDPQVMHERMKKLY 130 (222)
Q Consensus 97 ~~~~~~la~~i~~ll~~~~--~~~~~~~~~~~~~~f 130 (222)
.|+.+++.++|..++...+ .......++.+.+.|
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL~tvT~K~VR~~Le~~~ 46 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANLEEVTMKQICKKVYENY 46 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHc
Confidence 4688999999999999866 555677777777777
No 249
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=23.84 E-value=3.4e+02 Score=23.20 Aligned_cols=42 Identities=10% Similarity=0.022 Sum_probs=27.6
Q ss_pred ChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 39 PHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 39 ~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
+.+++..++..+|++|++.-....+..+..++..|+.++...
T Consensus 78 d~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 78 DDSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp CHHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEEEECS
T ss_pred CHHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCCEEEEee
Confidence 345677888899999987654333333445667788777543
No 250
>2i9n_A MHB4A peptide; beta-hairpin, alpha-helix, de novo protein; NMR {Synthetic}
Probab=23.58 E-value=22 Score=17.98 Aligned_cols=16 Identities=38% Similarity=0.445 Sum_probs=11.4
Q ss_pred CCccccHHHHHHHHhC
Q 027511 58 LTEAFCIAILEAASCG 73 (222)
Q Consensus 58 ~~E~~g~~ilEAma~G 73 (222)
..|++.-.+.|||+-|
T Consensus 18 aaeayakriaeamakg 33 (33)
T 2i9n_A 18 AAEAYAKRIAEAMAKG 33 (33)
T ss_dssp STHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhCC
Confidence 3566777788888765
No 251
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=23.54 E-value=3e+02 Score=22.41 Aligned_cols=79 Identities=14% Similarity=0.065 Sum_probs=50.8
Q ss_pred ceEEEEEcCCccHHHHHHHHH-HcCCCCcEEEeCCCCh-------------hHHHHHHHhccEEEEcC-CC----ccccH
Q 027511 4 KVRFIVGGDGPKRVRLEEMRE-KHSLQDRVEMLGAVPH-------------AQVRSVLISGHIFLNSS-LT----EAFCI 64 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~-~~~l~~~V~~~g~v~~-------------~~~~~ll~~adv~v~~s-~~----E~~g~ 64 (222)
+.++-|+|-|..-..+.+.+. ..|. +|.....-+. .++.+++..+|+++..- .+ .-++-
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~G~--~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~ 240 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGLGM--KLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDE 240 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCH
T ss_pred CCEEEEEEECHHHHHHHHHHHHhcCC--EEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhH
Confidence 457889999988888888777 7764 4655543211 15667889999976532 22 22344
Q ss_pred HHHHHHHhCCcEEEeCCCCc
Q 027511 65 AILEAASCGLLTVSTRVGGV 84 (222)
Q Consensus 65 ~ilEAma~G~PvVa~~~gg~ 84 (222)
..+..|.-|.-+|.+..|++
T Consensus 241 ~~l~~mk~gailin~srg~~ 260 (348)
T 2w2k_A 241 AFFAAMKPGSRIVNTARGPV 260 (348)
T ss_dssp HHHHHSCTTEEEEECSCGGG
T ss_pred HHHhcCCCCCEEEECCCCch
Confidence 56777777776776555543
No 252
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=23.33 E-value=2.2e+02 Score=23.59 Aligned_cols=105 Identities=10% Similarity=0.009 Sum_probs=57.6
Q ss_pred eEEEEEcCCccHHHHHHHHHHcCCCCcEE---EeCCCChhHHHHHHHhccEEEEc---CCCccccHHHHHHHHh-C----
Q 027511 5 VRFIVGGDGPKRVRLEEMREKHSLQDRVE---MLGAVPHAQVRSVLISGHIFLNS---SLTEAFCIAILEAASC-G---- 73 (222)
Q Consensus 5 ~~lvi~G~g~~~~~l~~~~~~~~l~~~V~---~~g~v~~~~~~~ll~~adv~v~~---s~~E~~g~~ilEAma~-G---- 73 (222)
.+++|++.|.......+.++++.-.-.|. ++-.++.+.+.+.+...+-+|.. +..-++|..+.+.++- |
T Consensus 250 ~dv~Iia~G~~v~~a~~Aa~~L~G~v~Vi~~~~l~P~d~~~i~~~~~~~~~vvvvEe~~~~GG~g~~v~~~l~~~~~~~l 329 (369)
T 1ik6_A 250 DDVTLVTYGAVVHKALEAAERVKASVEVVDLQTLNPLDFDTVLKSVSKTGRLIIAHDSPKTGGLGAEVRALVAEKALDRL 329 (369)
T ss_dssp SSEEEEECTTHHHHHHHHHHTSSSCEEEEECCEEETTCHHHHHHHHHHHCCEEEEEEEESTTSHHHHHHHHHHHHSGGGC
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCeEEEeeeecCCCCHHHHHHHHhccCeEEEEecCCcCCcHHHHHHHHHHhhCcccc
Confidence 35678888888888888888774022222 34455677788777776543332 2245677777776652 2
Q ss_pred -CcEEEeCCCCccccccCCceEE--eCCCHHHHHHHHHHHHh
Q 027511 74 -LLTVSTRVGGVPEVLPDDMVVL--AEPDPGDMVLAIRKAIS 112 (222)
Q Consensus 74 -~PvVa~~~gg~~e~i~~~~~g~--~~~~~~~la~~i~~ll~ 112 (222)
.||.. .|.....++.+. .. .-.+++.+++++.+++.
T Consensus 330 ~~pv~~--vg~~d~~~~~~~-l~~~~gl~~~~I~~~i~~~l~ 368 (369)
T 1ik6_A 330 TAPVIR--LAGPDVPQSPIA-ADAAYAPTVERIIKAIEYVMR 368 (369)
T ss_dssp SSCCEE--EEECCCC-------------CHHHHHHHHHHHHT
T ss_pred CCCeEE--EcCCCcCCCCHH-HHHHhCcCHHHHHHHHHHHhh
Confidence 45532 121112222222 21 22388999999988764
No 253
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=23.23 E-value=2.8e+02 Score=21.99 Aligned_cols=30 Identities=17% Similarity=-0.025 Sum_probs=21.3
Q ss_pred hccEEEEcCCCccccHHHHHHHHhCCcEEE
Q 027511 49 SGHIFLNSSLTEAFCIAILEAASCGLLTVS 78 (222)
Q Consensus 49 ~adv~v~~s~~E~~g~~ilEAma~G~PvVa 78 (222)
..|+++.++-...-.-.+.+|+..|++|++
T Consensus 72 ~vD~V~I~tP~~~H~~~~~~al~aGkhVl~ 101 (312)
T 3o9z_A 72 GVDYLSIASPNHLHYPQIRMALRLGANALS 101 (312)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEECCCchhhHHHHHHHHHCCCeEEE
Confidence 357766655554445566799999999986
No 254
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=22.75 E-value=1.6e+02 Score=22.63 Aligned_cols=66 Identities=11% Similarity=-0.017 Sum_probs=39.9
Q ss_pred ceEEEEEcCC-ccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 4 KVRFIVGGDG-PKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 4 ~~~lvi~G~g-~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
..+|.+-|-. ..+..+.++++++|. .+.=-..++ ..+.-+|.+.. .-..+.+.|+++|++||..++
T Consensus 9 ~~~~~~Sg~~~~~~~~l~~~i~~LGg--~~~~~~~~~--------~~~THlV~~~~--~RT~K~l~aia~G~wIvs~~w 75 (235)
T 3al2_A 9 QYIFQLSSLNPQERIDYCHLIEKLGG--LVIEKQCFD--------PTCTHIVVGHP--LRNEKYLASVAAGKWVLHRSY 75 (235)
T ss_dssp CCEEEEESCCHHHHHHHHHHHHHTTC--EECCSSSCC--------TTCCEEEESSC--CCSHHHHHHHHTTCEEECTHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHHcCC--EEeccCCCC--------CCCcEEEECCC--CCCHHHHHHHHcCCcCccHHH
Confidence 4567777733 345677888888764 221000111 23444555442 237899999999999998764
No 255
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=22.75 E-value=56 Score=26.91 Aligned_cols=34 Identities=9% Similarity=0.087 Sum_probs=23.7
Q ss_pred hccEEEEcCCCcccc-HHHHHHHHhCCcEEEeCCC
Q 027511 49 SGHIFLNSSLTEAFC-IAILEAASCGLLTVSTRVG 82 (222)
Q Consensus 49 ~adv~v~~s~~E~~g-~~ilEAma~G~PvVa~~~g 82 (222)
..|+++-++-..... -.+.+|+..|+.||+.+-.
T Consensus 66 ~iDvVve~t~~~~~a~~~~~~AL~aGKhVVtaNkk 100 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLVLPALEAGIPLITANKA 100 (332)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHHHTTCCEEECCHH
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHcCCeEEECCch
Confidence 678887765543233 3455799999999997654
No 256
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=22.72 E-value=82 Score=19.79 Aligned_cols=25 Identities=28% Similarity=0.444 Sum_probs=21.1
Q ss_pred CceEEEEEc-CCccHHHHHHHHHHcC
Q 027511 3 VKVRFIVGG-DGPKRVRLEEMREKHS 27 (222)
Q Consensus 3 p~~~lvi~G-~g~~~~~l~~~~~~~~ 27 (222)
.++.|.+.| ..+.+.+++++++.+|
T Consensus 9 ~g~~~~i~g~~~~~~~~l~~~i~~~G 34 (92)
T 4id3_A 9 KNCVIYINGYTKPGRLQLHEMIVLHG 34 (92)
T ss_dssp TTCEEEECSCCSSCHHHHHHHHHHTT
T ss_pred CCEEEEEeCCCCcCHHHHHHHHHHCC
Confidence 467889999 6778899999999887
No 257
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=22.70 E-value=1.9e+02 Score=23.86 Aligned_cols=42 Identities=10% Similarity=-0.055 Sum_probs=29.2
Q ss_pred ChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeC
Q 027511 39 PHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTR 80 (222)
Q Consensus 39 ~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~ 80 (222)
+.+++.++++.+|+++++.-...-.-.+..++..|+.+|...
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTCCEEECC
T ss_pred CHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCCeEEEcc
Confidence 457788999999999987432211234566788999998544
No 258
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=22.65 E-value=2.2e+02 Score=20.53 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=38.6
Q ss_pred EEEEEcCCccHHHHHHHHHHcC-------CCCcEEEeC-----------CCChhH-----HHHHHHhccEEEEcCCCccc
Q 027511 6 RFIVGGDGPKRVRLEEMREKHS-------LQDRVEMLG-----------AVPHAQ-----VRSVLISGHIFLNSSLTEAF 62 (222)
Q Consensus 6 ~lvi~G~g~~~~~l~~~~~~~~-------l~~~V~~~g-----------~v~~~~-----~~~ll~~adv~v~~s~~E~~ 62 (222)
++++.|.|....-...+..++. ..-++..+. ...... +...+...|+++.-|.....
T Consensus 43 ~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~a~~~d~~~~~~~~~~~~~~~~~~DvvI~iS~SG~t 122 (196)
T 2yva_A 43 KILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNS 122 (196)
T ss_dssp CEEEEESTHHHHHHHHHHHHHHTCSSSCCCCCCEEESSCCHHHHHHHTTSTTGGGHHHHHHHHHCCTTCEEEEECSSSCC
T ss_pred EEEEEeCchhhHHHHHHHHHHhccccccCCCCceEeecCchHHHHHHhcCCCHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 5788898876644444443321 222355543 111111 13456677998877764322
Q ss_pred c---HHHHHHHHhCCcEEE
Q 027511 63 C---IAILEAASCGLLTVS 78 (222)
Q Consensus 63 g---~~ilEAma~G~PvVa 78 (222)
. -.+-.|-..|.++|+
T Consensus 123 ~~~i~~~~~ak~~g~~vI~ 141 (196)
T 2yva_A 123 RDIVKAVEAAVTRDMTIVA 141 (196)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 2 223344467999884
No 259
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=22.60 E-value=1.1e+02 Score=23.03 Aligned_cols=61 Identities=13% Similarity=0.094 Sum_probs=35.1
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHhccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
++++++-|-.+ ++++++++++|- .+...++ .+.-+|.+... -..+.+.|++.|+|||..++
T Consensus 12 ~~~v~~sG~~~--~~~~~~i~~lGg----~~~~~~~---------~~THlI~~~~~--rt~K~l~a~~~g~~IV~~~W 72 (209)
T 2etx_A 12 APKVLFTGVVD--ARGERAVLALGG----SLAGSAA---------EASHLVTDRIR--RTVKFLCALGRGIPILSLDW 72 (209)
T ss_dssp CCEEEECSSCC--HHHHHHHHHTTC----EECSSTT---------TCSEEECSSCC--CSHHHHHHHHHTCCEECTHH
T ss_pred CcEEEEeCCCc--HHHHHHHHHCCC----EEeCCCC---------CceEEEECCCC--CCHHHHHHHhcCCccccHHH
Confidence 45566656433 345667777653 2222221 24444544321 25789999999999998753
No 260
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=22.39 E-value=3.1e+02 Score=22.13 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=42.9
Q ss_pred hHHHHHHHhccEEEEcCC-CccccHHHHHHHHhCCcEEEeCCCCcccccc------CC---ceEEeCC-CHHHHHHHHHH
Q 027511 41 AQVRSVLISGHIFLNSSL-TEAFCIAILEAASCGLLTVSTRVGGVPEVLP------DD---MVVLAEP-DPGDMVLAIRK 109 (222)
Q Consensus 41 ~~~~~ll~~adv~v~~s~-~E~~g~~ilEAma~G~PvVa~~~gg~~e~i~------~~---~~g~~~~-~~~~la~~i~~ 109 (222)
..-..-+++||++|+-.. .|+|--.++++.. +.++|....| +. .+. ++ --.|..| +...+++.|.+
T Consensus 86 p~d~~~l~~ADlvv~nG~~lE~wl~k~~~~~~-~~~~v~~s~g-i~-~~~~~~~~~~~~~DPHvWldp~n~~~~a~~I~~ 162 (321)
T 1xvl_A 86 PSDIVKAQDADLILYNGMNLERWFEQFLGNVK-DVPSVVLTEG-IE-PIPIADGPYTDKPNPHAWMSPRNALVYVENIRQ 162 (321)
T ss_dssp HHHHHHHHTCSEEEECCTTSSTTHHHHHHTSS-SCCEEETTTT-CC-CCBCCSSSSTTSBCCCGGGSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEECCCChHHHHHHHHHhcC-CCcEEEccCC-cc-cccccccCCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 344566889999998665 7998888888776 6677754432 21 111 01 0013333 45677777777
Q ss_pred HHhc
Q 027511 110 AISL 113 (222)
Q Consensus 110 ll~~ 113 (222)
.+..
T Consensus 163 ~L~~ 166 (321)
T 1xvl_A 163 AFVE 166 (321)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 261
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=22.27 E-value=1.8e+02 Score=19.48 Aligned_cols=110 Identities=9% Similarity=0.052 Sum_probs=65.2
Q ss_pred ceEEEEEcCCcc-HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEcC-CCccccHHHHHHHHh---CCcE
Q 027511 4 KVRFIVGGDGPK-RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSS-LTEAFCIAILEAASC---GLLT 76 (222)
Q Consensus 4 ~~~lvi~G~g~~-~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~s-~~E~~g~~ilEAma~---G~Pv 76 (222)
.++++|+.+.+. +..+..+.++.+....|..... .++....+.. .|+++.-. ..+.-|..+++.+.. .+|+
T Consensus 20 m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~--~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~i 97 (150)
T 4e7p_A 20 HMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKN--GQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKV 97 (150)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESS--HHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEE
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECC--HHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeE
Confidence 467888886543 3556666665442123444443 5677777755 47766543 345667777777654 5777
Q ss_pred EEeC-CCC---ccccccCCceEE-eCC-CHHHHHHHHHHHHhcCC
Q 027511 77 VSTR-VGG---VPEVLPDDMVVL-AEP-DPGDMVLAIRKAISLLP 115 (222)
Q Consensus 77 Va~~-~gg---~~e~i~~~~~g~-~~~-~~~~la~~i~~ll~~~~ 115 (222)
|.-. ... ..+.+..+..++ .-| +.+++.++|..+++...
T Consensus 98 i~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~~~ 142 (150)
T 4e7p_A 98 VVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEGRK 142 (150)
T ss_dssp EEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHTTCC
T ss_pred EEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHcCCE
Confidence 7433 222 223444555444 334 88999999999987643
No 262
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=22.20 E-value=94 Score=22.71 Aligned_cols=35 Identities=11% Similarity=0.030 Sum_probs=23.0
Q ss_pred HHHHhccEEEEcCC-CccccHHHHH---HHHhCCcEEEe
Q 027511 45 SVLISGHIFLNSSL-TEAFCIAILE---AASCGLLTVST 79 (222)
Q Consensus 45 ~ll~~adv~v~~s~-~E~~g~~ilE---Ama~G~PvVa~ 79 (222)
..+..||++|.--. .+.=..+.+| |.+.|+||++-
T Consensus 65 ~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~ 103 (162)
T 3ehd_A 65 ENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVAL 103 (162)
T ss_dssp HHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 35788999775322 3333445555 67999999964
No 263
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=21.89 E-value=1.3e+02 Score=25.73 Aligned_cols=69 Identities=7% Similarity=0.154 Sum_probs=42.4
Q ss_pred CceEEEEEcCCccHHHHHHHHHHcCCC-CcEEEeC----C---CC------------------------hhHHHHHHHhc
Q 027511 3 VKVRFIVGGDGPKRVRLEEMREKHSLQ-DRVEMLG----A---VP------------------------HAQVRSVLISG 50 (222)
Q Consensus 3 p~~~lvi~G~g~~~~~l~~~~~~~~l~-~~V~~~g----~---v~------------------------~~~~~~ll~~a 50 (222)
.+.+++|.|.|..-..+-....+.|.. .+|.+.. . +. ..++.+.+..+
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~a 264 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDA 264 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhccC
Confidence 356789999887766666666667762 3455443 1 10 11245667889
Q ss_pred cEEEEcCCC--ccccHHHHHHHH
Q 027511 51 HIFLNSSLT--EAFCIAILEAAS 71 (222)
Q Consensus 51 dv~v~~s~~--E~~g~~ilEAma 71 (222)
|++|+++.. ..++-..++.|+
T Consensus 265 DVlInaT~~~~G~~~~e~v~~m~ 287 (439)
T 2dvm_A 265 DVLISFTRPGPGVIKPQWIEKMN 287 (439)
T ss_dssp SEEEECSCCCSSSSCHHHHTTSC
T ss_pred CEEEEcCCCccCCCChHHHHhcC
Confidence 999998876 444433445454
No 264
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=21.58 E-value=1.1e+02 Score=26.57 Aligned_cols=145 Identities=12% Similarity=0.079 Sum_probs=78.4
Q ss_pred hhHHHHHHHhccEEEEcCCCccccH--HHHHHHH---------hCCcEEEeC---CCCccc-cc-------cCC---ceE
Q 027511 40 HAQVRSVLISGHIFLNSSLTEAFCI--AILEAAS---------CGLLTVSTR---VGGVPE-VL-------PDD---MVV 94 (222)
Q Consensus 40 ~~~~~~ll~~adv~v~~s~~E~~g~--~ilEAma---------~G~PvVa~~---~gg~~e-~i-------~~~---~~g 94 (222)
++.....+..||.||.-+- ++|+ =++|++. .++|||..+ ++|.-+ ++ .+. ...
T Consensus 236 ~eRK~~mv~~SDAfIaLPG--G~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~~l~~~l~~~~~~~~i 313 (460)
T 3bq9_A 236 EKRLEAFVRCAHGIVIFPG--GAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALDEFIGATIGDEARQLYK 313 (460)
T ss_dssp HHHHHHHHHHCSEEEECSC--SHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHTCTTGGGGCE
T ss_pred HHHHHHHHHhCCEEEEcCC--CcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHHHHHHHHhcchhhcCcE
Confidence 3456667788999886443 4442 3567776 489999875 233222 11 111 223
Q ss_pred EeCCCHHHHHHHHHHHHhcCC--------CC-------CHH------------HHHHHHHhcCCHHHHHHHHHHHHHHHh
Q 027511 95 LAEPDPGDMVLAIRKAISLLP--------KI-------DPQ------------VMHERMKKLYNWHDVAKRTEIVYDRAL 147 (222)
Q Consensus 95 ~~~~~~~~la~~i~~ll~~~~--------~~-------~~~------------~~~~~~~~~fs~~~~~~~~~~~~~~~~ 147 (222)
+..+|++++.+.|.+.+...+ +. ... .+.-+....-+.+.++..+...|..++
T Consensus 314 iv~ddpeEal~~l~~~~~~v~~~y~~~~~ry~~nW~l~i~~~~q~pf~p~h~~m~~l~l~~~~~~~~la~~Lr~~Fs~iv 393 (460)
T 3bq9_A 314 IIIDDPAAVAQHMHAGMAAVKQYRRDSGDAYYFNWTLKINEEFQRPFSPTHENVAALNLHPDQPKERLAADLRRAFSAIV 393 (460)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSCCCCGGGTSCCCCCHHHHHTCCBCTTSCHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHHHHHHHhcccCceeeeccccccChhhcCCCCCcccchhheeCCCCCCHHHHHHHHHHhhhHhh
Confidence 467899999988877665311 00 000 011122234566778888888888887
Q ss_pred cCCCccHHHHHHhHhhcCchH-HHHHHHHHHHHHHHHHHHHH
Q 027511 148 ECPNQNLVERLSRYLSCGAWA-GKLFCLVMIIDYLLWRFLEL 188 (222)
Q Consensus 148 ~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~ 188 (222)
...-. .+-+......|++. .-.-.++..++.++..+...
T Consensus 394 ~g~vk--~~~~~~i~~~g~~~~~~d~~~~~~~d~ll~~fv~q 433 (460)
T 3bq9_A 394 AGNVK--DEGIRQIRKNGVFTIHGEQSLMKRLDELLRAFVEQ 433 (460)
T ss_dssp HHHHC--HHHHHHHHHHCSEEEEBCHHHHHHHHHHHHHHHHT
T ss_pred CCCcc--ccccceeeecCCCchhCCHHHHHHHHHHHHHHHHh
Confidence 43211 11222233334431 11245666677777766653
No 265
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=21.35 E-value=1.8e+02 Score=19.05 Aligned_cols=104 Identities=4% Similarity=0.018 Sum_probs=61.1
Q ss_pred CceEEEEEcCCcc-HHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh--ccEEEEcCCCccccHHHHHHHHh---CCcE
Q 027511 3 VKVRFIVGGDGPK-RVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS--GHIFLNSSLTEAFCIAILEAASC---GLLT 76 (222)
Q Consensus 3 p~~~lvi~G~g~~-~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~--adv~v~~s~~E~~g~~ilEAma~---G~Pv 76 (222)
+..+++|+.+.+. ...+....+..+. .|..... .++....+.. .|+++ ..+.-|..+++.+.. .+|+
T Consensus 17 ~~~~ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~--~~~al~~l~~~~~dlvi---~~~~~g~~~~~~l~~~~~~~~i 89 (137)
T 2pln_A 17 GSMRVLLIEKNSVLGGEIEKGLNVKGF--MADVTES--LEDGEYLMDIRNYDLVM---VSDKNALSFVSRIKEKHSSIVV 89 (137)
T ss_dssp TCSEEEEECSCHHHHHHHHHHHHHTTC--EEEEESC--HHHHHHHHHHSCCSEEE---ECSTTHHHHHHHHHHHSTTSEE
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCc--EEEEeCC--HHHHHHHHHcCCCCEEE---EcCccHHHHHHHHHhcCCCccE
Confidence 4567888876543 4666777777654 4554444 4666666655 57777 223345666666543 7788
Q ss_pred EEe-CCCC---ccccccCCceEE--eCC-CHHHHHHHHHHHHhc
Q 027511 77 VST-RVGG---VPEVLPDDMVVL--AEP-DPGDMVLAIRKAISL 113 (222)
Q Consensus 77 Va~-~~gg---~~e~i~~~~~g~--~~~-~~~~la~~i~~ll~~ 113 (222)
|.- .... ..+.+..+..++ .+- +.+++..+|..++..
T Consensus 90 i~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 90 LVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRF 133 (137)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHHHHHHHTC-
T ss_pred EEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHHHHHHHHHHhh
Confidence 743 3322 222334444433 333 789999999888754
No 266
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=21.29 E-value=58 Score=25.08 Aligned_cols=68 Identities=10% Similarity=0.027 Sum_probs=39.4
Q ss_pred hHHHHHHHhccEEEEcCCCcccc--HHHHHHHH-------hCCcEEEeCCCCccc-------cccCC-------ceEEeC
Q 027511 41 AQVRSVLISGHIFLNSSLTEAFC--IAILEAAS-------CGLLTVSTRVGGVPE-------VLPDD-------MVVLAE 97 (222)
Q Consensus 41 ~~~~~ll~~adv~v~~s~~E~~g--~~ilEAma-------~G~PvVa~~~gg~~e-------~i~~~-------~~g~~~ 97 (222)
+...-+...||.+|... .++| --++|++. .++||+.-+.+.... ++.++ ......
T Consensus 123 ~Rk~~m~~~sda~Ivlp--GG~GTL~El~e~lt~~qlg~~~~kPvvll~~~~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~ 200 (217)
T 1wek_A 123 VRKVLFVRYAVGFVFLP--GGFGTLDELSEVLVLLQTEKVHRFPVFLLDRGYWEGLVRWLAFLRDQKAVGPEDLQLFRLT 200 (217)
T ss_dssp HHHHHHHHTEEEEEECS--CCHHHHHHHHHHHHHHHTTSSCCCCEEEECHHHHHHHHHHHHHHHHTTSSCTTGGGGSEEE
T ss_pred HHHHHHHHhCCEEEEeC--CCCcHHHHHHHHHHHHhhCCCCCCCEEEeCcccchhHHHHHHHHHHCCCCCHHHcCeEEEe
Confidence 44455667789987644 2344 34567776 479999887642211 11222 123556
Q ss_pred CCHHHHHHHHHHH
Q 027511 98 PDPGDMVLAIRKA 110 (222)
Q Consensus 98 ~~~~~la~~i~~l 110 (222)
+|++++.+.+.+.
T Consensus 201 ~~~~e~~~~l~~~ 213 (217)
T 1wek_A 201 DEPEEVVQALKAE 213 (217)
T ss_dssp SCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHh
Confidence 6888888877643
No 267
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=21.26 E-value=1.5e+02 Score=20.45 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=16.6
Q ss_pred ccEEEEcCCCccccHHHHHHHHhCCcEEEeCC
Q 027511 50 GHIFLNSSLTEAFCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 50 adv~v~~s~~E~~g~~ilEAma~G~PvVa~~~ 81 (222)
.-++|.+...+.-...+--|-..|+||+.++.
T Consensus 75 ~~~iIlt~g~~~~~~i~~~A~~~~ipvl~t~~ 106 (139)
T 2ioj_A 75 VRCLILTGNLEPVQLVLTKAEERGVPVILTGH 106 (139)
T ss_dssp EEEEEEETTCCCCHHHHHHHHHHTCCEEECSS
T ss_pred CcEEEEcCCCCCCHHHHHHHHHCCCeEEEECC
Confidence 33455555555444444333455666666654
No 268
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=20.98 E-value=1.9e+02 Score=19.12 Aligned_cols=106 Identities=12% Similarity=0.059 Sum_probs=64.3
Q ss_pred ceEEEEEcCCc-cHHHHHHHHHHcCCCCcEEEeCCCChhHHHHHHHh---ccEEEEcCCC-c-cccHHHHHHHH--hCCc
Q 027511 4 KVRFIVGGDGP-KRVRLEEMREKHSLQDRVEMLGAVPHAQVRSVLIS---GHIFLNSSLT-E-AFCIAILEAAS--CGLL 75 (222)
Q Consensus 4 ~~~lvi~G~g~-~~~~l~~~~~~~~l~~~V~~~g~v~~~~~~~ll~~---adv~v~~s~~-E-~~g~~ilEAma--~G~P 75 (222)
..+++|+.+.+ .+..+....++.+. .|.... +.++....+.. .|+++.-... + .-|..+++.+. -.+|
T Consensus 5 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~~~~--~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ 80 (140)
T 3h5i_A 5 DKKILIVEDSKFQAKTIANILNKYGY--TVEIAL--TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELP 80 (140)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTC--EEEEES--SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCC
T ss_pred CcEEEEEeCCHHHHHHHHHHHHHcCC--EEEEec--ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCC
Confidence 46788887654 34667777777664 344433 35666666644 4776654433 3 56777776665 3678
Q ss_pred EEE-eCCCC---ccccccCCceEEe-CC-CHHHHHHHHHHHHhc
Q 027511 76 TVS-TRVGG---VPEVLPDDMVVLA-EP-DPGDMVLAIRKAISL 113 (222)
Q Consensus 76 vVa-~~~gg---~~e~i~~~~~g~~-~~-~~~~la~~i~~ll~~ 113 (222)
+|. +.... ..+.+..|..++. -| +++++..+|..+++.
T Consensus 81 ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~ 124 (140)
T 3h5i_A 81 VVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALRL 124 (140)
T ss_dssp EEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHHH
Confidence 874 33222 2334445555543 34 889999999998875
No 269
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=20.83 E-value=3.4e+02 Score=22.00 Aligned_cols=44 Identities=23% Similarity=0.188 Sum_probs=29.8
Q ss_pred HHHHHHHh--ccEEEEcCCCcc----ccHHHHHHHHhCCcEEEeCCCCcc
Q 027511 42 QVRSVLIS--GHIFLNSSLTEA----FCIAILEAASCGLLTVSTRVGGVP 85 (222)
Q Consensus 42 ~~~~ll~~--adv~v~~s~~E~----~g~~ilEAma~G~PvVa~~~gg~~ 85 (222)
++.+++.. .|+++-.+-++. .--.+.+|+..|+.||+.|-+.+.
T Consensus 71 d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla 120 (327)
T 3do5_A 71 KAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLV 120 (327)
T ss_dssp CHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHH
T ss_pred CHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhH
Confidence 67777766 677776553321 123468999999999999775443
No 270
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=20.75 E-value=1.8e+02 Score=23.40 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=27.1
Q ss_pred hHHHHHHHh-----ccEEEEcCCCccccHHHHHHHHh--CCcEEEeC
Q 027511 41 AQVRSVLIS-----GHIFLNSSLTEAFCIAILEAASC--GLLTVSTR 80 (222)
Q Consensus 41 ~~~~~ll~~-----adv~v~~s~~E~~g~~ilEAma~--G~PvVa~~ 80 (222)
+++.+++.. .|+.+.++-.+.-.-...+|+.. |+.|+.-.
T Consensus 58 ~~~e~ll~~~~~~~iDvV~~atp~~~h~~~a~~al~a~~Gk~Vi~ek 104 (312)
T 1nvm_B 58 AGVEGLIKLPEFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLT 104 (312)
T ss_dssp SHHHHHHHSGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCHHHHHhccCCCCCcEEEECCChHHHHHHHHHHHHhCCCCEEEEcC
Confidence 345566543 67777665555555566788899 99999744
No 271
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=20.72 E-value=1.2e+02 Score=26.17 Aligned_cols=48 Identities=15% Similarity=0.069 Sum_probs=32.9
Q ss_pred EEEEcCC----ccHHHHHHHHHHcCCCC-----------------cEEEeCCCChhHHHHHHHhccEEEE
Q 027511 7 FIVGGDG----PKRVRLEEMREKHSLQD-----------------RVEMLGAVPHAQVRSVLISGHIFLN 55 (222)
Q Consensus 7 lvi~G~g----~~~~~l~~~~~~~~l~~-----------------~V~~~g~v~~~~~~~ll~~adv~v~ 55 (222)
++++|.| ...+++.+++++++.+- .+-.+| .........+..+|++|.
T Consensus 204 vil~G~g~~~~~a~~~l~~lae~~~~Pv~~~~~~g~g~~~~~~p~~~G~~g-~~~~~~~~~l~~aDlvl~ 272 (528)
T 1q6z_A 204 AIVLGPDVDAANANADCVMLAERLKAPVWVAPSAPRCPFPTRHPCFRGLMP-AGIAAISQLLEGHDVVLV 272 (528)
T ss_dssp EEEECHHHHHTTCHHHHHHHHHHHTCCEEECSSCSBCCSCTTSTTEEEECC-SCHHHHHHHHTTCSEEEE
T ss_pred EEEECCccchhhHHHHHHHHHHHHCCCEEEeccCccccCCCCCccccCcCC-CCcHHHHHHHhcCCEEEE
Confidence 7888866 34578999999987751 122333 335667788899999775
No 272
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=20.33 E-value=4.6e+02 Score=23.31 Aligned_cols=38 Identities=5% Similarity=0.031 Sum_probs=31.3
Q ss_pred hHHHHHHH--hccEEEEcCC-CccccHHHHHHHHh--CCcEEE
Q 027511 41 AQVRSVLI--SGHIFLNSSL-TEAFCIAILEAASC--GLLTVS 78 (222)
Q Consensus 41 ~~~~~ll~--~adv~v~~s~-~E~~g~~ilEAma~--G~PvVa 78 (222)
..+.+.++ .+|+||-.|. ...|.--++++|+. -.|+|-
T Consensus 355 ~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 397 (564)
T 1pj3_A 355 DTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIF 397 (564)
T ss_dssp SSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 35888998 5999999996 68899999999994 667763
No 273
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=20.32 E-value=2.2e+02 Score=23.92 Aligned_cols=81 Identities=10% Similarity=0.020 Sum_probs=53.5
Q ss_pred ceEEEEEcCCccHHHHHHHHHHcCCCCcEEEeCCCC--h-----------hHHHHHHHhccEEEE-cCCC----ccccHH
Q 027511 4 KVRFIVGGDGPKRVRLEEMREKHSLQDRVEMLGAVP--H-----------AQVRSVLISGHIFLN-SSLT----EAFCIA 65 (222)
Q Consensus 4 ~~~lvi~G~g~~~~~l~~~~~~~~l~~~V~~~g~v~--~-----------~~~~~ll~~adv~v~-~s~~----E~~g~~ 65 (222)
+-++-|+|-|..-..+.+.+...|. +|.....-+ . .++.++++.+|+++. .+.+ .-++-.
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~G~--~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~ 268 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPFDV--HLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDE 268 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTC--EEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHH
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCC--EEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHH
Confidence 4578899999888888887777764 465544321 1 246788999999764 3322 224456
Q ss_pred HHHHHHhCCcEEEeCCCCccc
Q 027511 66 ILEAASCGLLTVSTRVGGVPE 86 (222)
Q Consensus 66 ilEAma~G~PvVa~~~gg~~e 86 (222)
.+..|.-|.-+|.+..|++.+
T Consensus 269 ~l~~mk~gailIN~aRG~~vd 289 (393)
T 2nac_A 269 TLKLFKRGAYIVNTARGKLCD 289 (393)
T ss_dssp HHTTSCTTEEEEECSCGGGBC
T ss_pred HHhhCCCCCEEEECCCchHhh
Confidence 677777777788776676544
No 274
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=20.15 E-value=2.1e+02 Score=19.40 Aligned_cols=23 Identities=17% Similarity=0.094 Sum_probs=14.9
Q ss_pred EEEEEcCCccHHHHHHHHHHcCC
Q 027511 6 RFIVGGDGPKRVRLEEMREKHSL 28 (222)
Q Consensus 6 ~lvi~G~g~~~~~l~~~~~~~~l 28 (222)
+++|+|.|..-..+-+...+.+.
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~ 31 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDI 31 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC
T ss_pred CEEEECcCHHHHHHHHHHHHCCC
Confidence 57888888766555555555443
No 275
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=20.14 E-value=2.7e+02 Score=21.64 Aligned_cols=20 Identities=15% Similarity=-0.001 Sum_probs=16.6
Q ss_pred ccHHHHHHHHhCCcEEEeCC
Q 027511 62 FCIAILEAASCGLLTVSTRV 81 (222)
Q Consensus 62 ~g~~ilEAma~G~PvVa~~~ 81 (222)
-..+.+.|++.|.|||..++
T Consensus 98 rt~K~l~ala~g~~iVs~~W 117 (259)
T 1kzy_C 98 RTRKYFLCLASGIPCVSHVW 117 (259)
T ss_dssp CSHHHHHHHHHTCCEEETHH
T ss_pred CcHHHHHHHhcCCCCccHHH
Confidence 45789999999999998753
Done!