BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027513
(222 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 293 bits (751), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 171/219 (78%), Gaps = 5/219 (2%)
Query: 1 MTADGGNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTG 60
MT G NQLIS+ P+ELKF+FELEKQ +CDLKV N TE++VAFKVKTTSPKKYFVRPNTG
Sbjct: 1 MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60
Query: 61 VVQPWDSCIIR----AQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIE 116
V+QPWDSCIIR AQRE PPDMQCKDKFLLQSTIVP +TDVD+LP DTF KDSGKT+
Sbjct: 61 VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120
Query: 117 ECKLRVVYVSPSSAQGNLEDEGLVSATRSPDANSALQRLKDERDAAVRQTQLLQQDLDML 176
ECKL+V Y++PS+ Q + E +S + S +QRLK+ERDAAV+QTQ LQ +L+ +
Sbjct: 121 ECKLKVSYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETV 180
Query: 177 -KRRGQRKGVRGFSLMFAAFVGLIGIMVGLILNLLLSSP 214
+RR QR G SL AA VGLIG+++G IL L L+SP
Sbjct: 181 RRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLTLASP 219
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 144/232 (62%), Gaps = 32/232 (13%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINNTEHH-VAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+++HP ELKF FEL+KQ C +++ N T VAFKVKTT+P+KY VRPNTGVV P DS
Sbjct: 6 LVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDS 65
Query: 68 C----IIRAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVV 123
C ++AQ+E+P DMQCKDKFL+Q+ +V T ++ + FNK++G+ IE+ KLRVV
Sbjct: 66 CNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVV 125
Query: 124 YV-----SP---SSAQGN-----LEDEGLVSAT--------------RSPDANSALQRLK 156
Y+ SP S +GN L D SA+ +S +A S + +L
Sbjct: 126 YIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLT 185
Query: 157 DERDAAVRQTQLLQQDLDMLKRRGQRKGVRGFSLMFAAFVGLIGIMVGLILN 208
+E+ +A +Q+Q L+ +L+ML++ +K G SL+ VGL+G ++G +LN
Sbjct: 186 EEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLLN 237
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 150 bits (380), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 128/220 (58%), Gaps = 33/220 (15%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
N+L+++ P +L+F FEL+KQ C L + N T+++VAFKVKTT+PKKY VRPNTGVV P
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 66 DSC----IIRAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLR 121
S ++AQ+E+P D+QCKDKFLLQ + D+ + F+K++G +EE KLR
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 122 VVYVSP--------------SSAQGNLEDEG----LVSATR-----------SPDANSAL 152
VVYV+P SS + ++ D G +A R S +A + +
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALV 181
Query: 153 QRLKDERDAAVRQTQLLQQDLDMLKRRGQRKGVRGFSLMF 192
+L +E+++AV+ LQQ+LD L+R +R G M+
Sbjct: 182 TKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMY 221
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 33/219 (15%)
Query: 7 NQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
++L++V P +L+F FEL+KQ C L + N T+++VAFKVKTT+PKKY VRPNTGVV P
Sbjct: 20 SELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRS 79
Query: 67 SC----IIRAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 122
+C ++AQ+E+P DMQCKDKFLLQ I ++ P+ F+K++G +EE KLRV
Sbjct: 80 TCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRV 139
Query: 123 VYVSP--------------SSAQGNLEDEGLVSA---------------TRSPDANSALQ 153
YV+P SS + ++ D G S + +A + +
Sbjct: 140 TYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARALIT 199
Query: 154 RLKDERDAAVRQTQLLQQDLDMLKRRGQRKGVRGFSLMF 192
+L +E+ +A++ LQ++LD L+R ++ G M+
Sbjct: 200 KLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMY 238
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 130 bits (328), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 85/126 (67%), Gaps = 4/126 (3%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSC 68
L+ + P L+F +L+KQ C +++ N T H+VAFKVKTTSPKKY VRPN GVV P +C
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 69 ----IIRAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVY 124
I++A +E PPDM CKDKFL+QST V + T +D+ F+K GK IEE KLRV
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 125 VSPSSA 130
V PS +
Sbjct: 125 VPPSDS 130
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 95/154 (61%), Gaps = 8/154 (5%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
++L+ + P +++F EL K+ C L + N TE++VAFK KTT+ KKY+VRPN GVV P
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232
Query: 66 DSC----IIRAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLR 121
SC I++A +E+P DMQC+DK L Q +V T D+ + F+K++G EE +L+
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292
Query: 122 VVYVS----PSSAQGNLEDEGLVSATRSPDANSA 151
V+YV+ PS Q E+ A+ S + N++
Sbjct: 293 VMYVTPPQPPSPVQEGTEEGSSPRASVSDNGNAS 326
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 92/153 (60%), Gaps = 8/153 (5%)
Query: 7 NQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
++L++ +++F EL KQG C L + N T+++VAFK +TT PK Y V+P+ GVV P
Sbjct: 4 DELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPRS 63
Query: 67 SC----IIRAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 122
SC +++A +E+P D QCKDK L Q +V T ++ + F+K++G +EE ++
Sbjct: 64 SCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIFKI 123
Query: 123 VYVSP----SSAQGNLEDEGLVSATRSPDANSA 151
+YV+P S Q LED SA+ S N++
Sbjct: 124 IYVAPPQPQSPVQEGLEDGSSPSASVSDKGNAS 156
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 81/130 (62%), Gaps = 4/130 (3%)
Query: 5 GGNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQP 64
N+L+ + P L+F FEL+KQ C L + N T+++VAFKVKTT+ Y VRPN G++ P
Sbjct: 2 SNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILP 61
Query: 65 WDSC----IIRAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKL 120
+C ++AQ+E P DMQ +KF++QS + ++ + F+K+SG +EE KL
Sbjct: 62 KSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETKL 121
Query: 121 RVVYVSPSSA 130
RV YV ++
Sbjct: 122 RVTYVCSTTT 131
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 29 CDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRA-----QRESPPDMQCK 83
CDL++ N + + FKVKTT+PK+Y VRPN G ++ + + E P +C+
Sbjct: 21 CDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLDHEPAPGTKCR 80
Query: 84 DKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYV-SPSSAQGN 133
DKFL+QST + D+ D + + S I E K+R VY PS+A +
Sbjct: 81 DKFLVQSTELKPELQGMDI-ADIWTQVSKANISERKIRCVYSEGPSTANAH 130
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 17/120 (14%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDS----CIIRAQRESP-PDMQCKDK 85
+ V N V FKVKTT+PK Y VRPN+G ++P + +++A +E P PD +C+DK
Sbjct: 23 ISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDK 82
Query: 86 FLLQSTIVPSNTDVDDLPPDTFN------KDSGKTIEECKLRVVYVS---PSSAQGNLED 136
FL+QS + D D + ++ + G++I + K+R VY + P SA +E+
Sbjct: 83 FLIQSMAI---GDADTSNVENYHEFWTEMEKQGRSIFDRKIRCVYSTKQPPQSADKQVEN 139
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRAQRE---SPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVV 123
S + + P+ + K KF++QS P TD D+ + + + + + KLR V
Sbjct: 66 SINVSVMLQPFDYDPNEKSKHKFMVQSMFAP--TDTSDMEA-VWKEAKPEDLMDSKLRCV 122
Query: 124 YVSPSSAQG--NLEDEGLV----SATRSPDANSALQRLKDERDA--AVRQTQLLQQDLDM 175
+ P+ ++E ++ S T +P + AL D+ + + + + LQ ++
Sbjct: 123 FELPAENDKPHDVEINKIIPTTASKTETPTVSKALSSSLDDTEVKKVMEECKRLQSEVQR 182
Query: 176 LKRRGQR 182
L+ ++
Sbjct: 183 LREENKQ 189
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 23/145 (15%)
Query: 16 ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRAQRE 75
EL+F DLK+ N T+ + FKVKTT+PK+Y VRPN+G+++P S + +
Sbjct: 15 ELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAVAVMLQ 74
Query: 76 S---PPDMQCKDKFLLQSTIVPSNTDVD------DLPPDTFNKDSGKTIEECKLRVVYVS 126
P+ + K KF++QS P + D PP+ ++ + KLR V+
Sbjct: 75 PFNYDPNEKNKHKFMVQSMYAPDHVVESQELLWKDAPPE--------SLMDTKLRCVFEM 126
Query: 127 P-SSAQGNLEDEGLVSATRSPDANS 150
P S Q D A+R+ DA +
Sbjct: 127 PDGSHQAPASD-----ASRATDAGA 146
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 97/187 (51%), Gaps = 15/187 (8%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 S---CIIRAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVV 123
S ++ + P+ + K KF++QS P++T D+ + + + + + KLR V
Sbjct: 66 SINVSVMLQPFDYDPNEKSKHKFMVQSMFAPADT--SDMEA-AWKEAKPEDLMDSKLRCV 122
Query: 124 YVSPSSAQG--NLEDEGLVSATRS----PDANSALQRLKDERDA--AVRQTQLLQQDLDM 175
+ P+ ++E ++S T S P + AL D+ + + + + LQ ++
Sbjct: 123 FELPAENDKPHDVEINKIISTTASKTETPVVSKALSSALDDTEVKKVMEECKRLQSEVQR 182
Query: 176 LKRRGQR 182
L+ ++
Sbjct: 183 LREENKQ 189
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 43/239 (17%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRAQRE---SPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVV 123
S + + P+ + K KF++QS P TD D+ + + + + + KLR V
Sbjct: 66 SINVSVMLQPFDYDPNEKSKHKFMVQSMFAP--TDTSDMEA-VWKEAKPEDLMDSKLRCV 122
Query: 124 YVSPSSAQG--NLEDEGLVSATRSPDAN---------------------------SALQR 154
+ P+ ++E ++S T S +QR
Sbjct: 123 FELPAENDKPHDVEINKIISTTASKTETPIVSKSLSSSLDDTEVKKVMEECKRLQGEVQR 182
Query: 155 LKDE-----RDAAVRQTQLLQQD--LDMLKRRGQRKGVRGFSLMFAAFVGLIGIMVGLI 206
L++E + +R + +Q + + L G+ +G+ L ++G+++G I
Sbjct: 183 LREENKQFKEEDGLRMRKTVQSNSPISALAPTGKEEGLSTRLLALVVLFFIVGVIIGKI 241
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 45/240 (18%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT P++Y VRPN+GV+
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGA 65
Query: 67 S---CIIRAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLRV 122
S ++ + P+ + K KF++QS P +T D++ + + + + + + KLR
Sbjct: 66 SLNVSVMLQPFDYDPNEKSKHKFMVQSMFAPPDTSDMEAV----WKEAKPEDLMDSKLRC 121
Query: 123 VYVSPS--SAQGNLEDEGLV----SATRSPDANSAL------------------------ 152
V+ P+ + ++E ++ S T +P A +L
Sbjct: 122 VFELPAENAKPHDVEINKIIPTSASKTEAPAAAKSLTSPLDDTEVKKVMEECRRLQGEVQ 181
Query: 153 ------QRLKDERDAAVRQTQLLQQDLDMLKRRGQRKGVRGFSLMFAAFVGLIGIMVGLI 206
++LK+E VR+ + L G+ +G+ L ++G+++G I
Sbjct: 182 RLREESRQLKEEDGLRVRKAMPSNSPVAALAATGKEEGLSARLLALVVLFFIVGVIIGKI 241
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+GV+
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGA 65
Query: 67 S---CIIRAQRESPPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLRV 122
S ++ + P+ + K KF++QS P +T D++ + + + + + + KLR
Sbjct: 66 SLNVSVMLQPFDYDPNEKSKHKFMVQSMFAPPDTSDMEAV----WKEAKPEDLMDSKLRC 121
Query: 123 VYVSPS 128
V+ P+
Sbjct: 122 VFELPA 127
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRAQ 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + +
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 74 RES---PPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 128
+ P+ + K KF++Q+ P NT D++ + + + + + KLR V+ P+
Sbjct: 80 LQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRAQ 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + +
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 74 RES---PPDMQCKDKFLLQSTIVPSNT-DVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 128
+ P+ + K KF++Q+ P NT D++ + + + + + KLR V+ P+
Sbjct: 80 LQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Query: 15 EELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRA-- 72
E+L F +E KQ +K+ N ++ HVAFK +TT+PK F+RP ++ P ++ I
Sbjct: 114 EKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFK 173
Query: 73 ------QRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYVS 126
E P D + + KF + S V D P+ F++ +E LRV+++
Sbjct: 174 FVEPPENNEKPMDQRSRVKFKIMSLKVKGPMDYV---PELFDEQKDDVSKEQILRVIFLD 230
Query: 127 PSSAQGNLE 135
P + LE
Sbjct: 231 PERSNPALE 239
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRAQ 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+GV+ P +
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVM 79
Query: 74 RES---PPDMQCKDKFLLQSTIVPSN-TDVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 128
+ P+ + K KF++Q+ P N +D++ + + + + + KLR V+ P+
Sbjct: 80 LQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS2 PE=1 SV=3
Length = 244
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 10 ISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCI 69
+ + P+ L + L +Q + NN++ +AFKVKTT+PK Y VRPN VV P ++
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 70 IRA-----QRESPPDMQCKDKFLLQSTIVPSNTDVD 100
++ E D +C+DKFL+ +PS D++
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLV--ITLPSPYDLN 97
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRAQ 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P +
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM 79
Query: 74 RES---PPDMQCKDKFLLQSTIVPSN-TDVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 128
+ P+ + K KF++Q+ P N +D++ + + + + + KLR V+ P+
Sbjct: 80 LQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRAQ 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + +
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVM 79
Query: 74 RE---SPPDMQCKDKFLLQSTIVPSN-TDVDDLPPDTFNKDSGKTIEECKLRVVYVSPS 128
+ P+ + K KF++Q+ P N +D++ + + + + + KLR V+ P+
Sbjct: 80 LQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAV----WKEAKPDELMDSKLRCVFEMPN 134
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 16 ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRA--- 72
+L F +E KQ +K+ N ++ HVAFK +TT PK F+RP ++ P + I
Sbjct: 107 KLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKF 166
Query: 73 -----QRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYVSP 127
E P + + KF + S + TD P+ F + EE +RVV++ P
Sbjct: 167 VEPPENNEKPMEQKSGVKFKIMSLKMKVPTDYM---PELFEEQKDHVSEEQVMRVVFLDP 223
Query: 128 SSAQGNLE 135
+ +E
Sbjct: 224 ENPNSMME 231
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 17 LKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRA---- 72
L F +E KQ +K+ N ++ H AFK +TT+PK ++RP GV+ P +S
Sbjct: 85 LYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFV 144
Query: 73 -----QRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVYV-- 125
+ P + + K KF + S V + P+ F++ + E LRV+++
Sbjct: 145 EHPENNEKQPLNQKSKVKFKIMSLKVKPGVEYV---PELFDEQKDQVAVEQVLRVIFIDA 201
Query: 126 -SPSSAQGNL-----EDEGLVSATRSP 146
PS+A L E E V A + P
Sbjct: 202 DRPSAALEKLKRQLDEAEAAVEARKKP 228
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SCS22 PE=1 SV=2
Length = 175
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRAQ 73
PE+L F L KQ +K+ N+ E V FKV+T++P KY VRPN ++ +S ++
Sbjct: 5 PEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVNVQIV 64
Query: 74 RESPPDM-------QCKDKFLLQSTIVPS 95
P Q +DKFL+ + +P+
Sbjct: 65 FLGLPKSTADDEMDQKRDKFLIVTLPIPA 93
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 38.5 bits (88), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINN-TEHHVAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+ + P E + +E L V+ N T++ VAFKV+TT+P+KY V+P+ P S
Sbjct: 327 LLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 386
Query: 68 CIIRAQRESPPDMQCKDKFLLQS 90
I + +D+FL+ +
Sbjct: 387 IDIIVSPHGGLTVSAQDRFLIMA 409
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 37.4 bits (85), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINN-TEHHVAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+ + P E + E L V+ N T++ VAFKV+TT+P+KY V+P+ P S
Sbjct: 327 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 386
Query: 68 CIIRAQRESPPDMQCKDKFLLQS 90
I + +D+FL+ +
Sbjct: 387 VDIVVSPHGGLTVSAQDRFLIMA 409
>sp|Q9XXL3|SSP31_CAEEL Sperm-specific class P protein 31 OS=Caenorhabditis elegans
GN=ssp-31 PE=1 SV=1
Length = 107
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 33 VINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRAQRESPPDMQCKDKFLLQSTI 92
+++ +E +AFKVK+++ + Y VRP G V + R + P + DK ++Q
Sbjct: 22 IVSESESRLAFKVKSSNNESYRVRPVYGFVDAKGKAKLEVNRLAGPAKE--DKLVIQYAE 79
Query: 93 VPSN 96
VP++
Sbjct: 80 VPAD 83
>sp|Q9UJG1|MSPD1_HUMAN Motile sperm domain-containing protein 1 OS=Homo sapiens
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSC---IIRAQRESPPDMQCKDKFLLQ 89
C +IR + DKF LQ
Sbjct: 72 QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q8VEL0|MSPD1_MOUSE Motile sperm domain-containing protein 1 OS=Mus musculus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSC---IIRAQRESPPDMQCKDKFLLQ 89
C +IR + DKF LQ
Sbjct: 72 QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q5RCC7|MSPD1_PONAB Motile sperm domain-containing protein 1 OS=Pongo abelii
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVNAAGAVKP- 71
Query: 66 DSC---IIRAQRESPPDMQCKDKFLLQ 89
C +IR + DKF LQ
Sbjct: 72 QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q2T9W7|MSPD1_BOVIN Motile sperm domain-containing protein 1 OS=Bos taurus GN=MOSPD1
PE=2 SV=1
Length = 213
Score = 33.9 bits (76), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSC---IIRAQRESPPDMQCKDKFLLQ 89
C +IR + DKF LQ
Sbjct: 72 QCCMDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q5RJS6|MSPD1_RAT Motile sperm domain-containing protein 1 OS=Rattus norvegicus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 33.9 bits (76), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVIDAAGAVKP- 71
Query: 66 DSC---IIRAQRESPPDMQCKDKFLLQ 89
C +IR + DKF LQ
Sbjct: 72 QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q96LR7|CB050_HUMAN Uncharacterized protein C2orf50 OS=Homo sapiens GN=C2orf50 PE=2
SV=1
Length = 162
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 125 VSPSSAQGNLEDEGLVSATRSPDANSALQRLKDERDAAVRQTQLLQQDLDMLKRRGQRKG 184
VSP++ G + GL ++P A A + + V+Q QL ++ L+ +RRGQ++
Sbjct: 28 VSPAARGGPMASRGLAGGCQAPQALKAQRVAQGAACDGVQQDQLWRELLEA-ERRGQQRW 86
Query: 185 VRGFSLM 191
++ +S +
Sbjct: 87 IQNWSFL 93
>sp|C0SDW6|AMPP2_PARBP Probable Xaa-Pro aminopeptidase PABG_05921 OS=Paracoccidioides
brasiliensis (strain Pb03) GN=PABG_05921 PE=3 SV=1
Length = 506
Score = 31.6 bits (70), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Query: 22 ELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW--DSCIIRAQRESPPD 79
E++K G L + HH+ +V SP F + N G W S + S P
Sbjct: 364 EIKKSGASSLFFPHGLGHHIGLEVHDVSPDSIFAQDNDGTTDSWLFSSTYLSPCTASSPT 423
Query: 80 MQCKDKFLLQSTIVPSNTDVDDLPP 104
++ ++ I S +D+ P
Sbjct: 424 LKSGMVVTVEPGIYFSQIALDNAKP 448
>sp|C1GHS9|AMPP2_PARBD Probable Xaa-Pro aminopeptidase PADG_06815 OS=Paracoccidioides
brasiliensis (strain Pb18) GN=PADG_06815 PE=3 SV=1
Length = 415
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 22 ELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
E++K G L + HH+ +V SP F + N G W
Sbjct: 273 EIKKSGASSLFFPHGLGHHIGLEVHDVSPDSIFAQDNDGTTDSW 316
>sp|Q21244|MSP63_CAEEL Major sperm protein 63 OS=Caenorhabditis elegans GN=msp-63 PE=2
SV=3
Length = 127
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCII 70
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLL 71
>sp|Q9TVW5|MSP77_CAEEL Major sperm protein 77/79 OS=Caenorhabditis elegans GN=msp-77
PE=2 SV=3
Length = 127
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCII 70
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLL 71
>sp|Q19832|MSP3_CAEEL Major sperm protein 3 OS=Caenorhabditis elegans GN=msp-3 PE=2
SV=3
Length = 127
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCII 70
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLL 71
>sp|Q94053|MSP78_CAEEL Major sperm protein 78 OS=Caenorhabditis elegans GN=msp-78 PE=2
SV=3
Length = 127
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCII 70
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLL 71
>sp|P53017|MSP19_CAEEL Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
OS=Caenorhabditis elegans GN=msp-19 PE=1 SV=2
Length = 127
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCII 70
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLL 71
>sp|Q23519|MS152_CAEEL Major sperm protein 152 OS=Caenorhabditis elegans GN=msp-152 PE=2
SV=3
Length = 127
Score = 30.8 bits (68), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCII 70
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLL 71
>sp|P05634|MSP10_CAEEL Major sperm protein 10/36/56/76 OS=Caenorhabditis elegans
GN=msp-10 PE=2 SV=4
Length = 127
Score = 30.8 bits (68), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCII 70
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLL 71
>sp|P53018|MSP32_CAEEL Major sperm protein 32 OS=Caenorhabditis elegans GN=msp-32 PE=2
SV=1
Length = 190
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCII 70
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++
Sbjct: 95 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLL 134
>sp|Q17856|MSP55_CAEEL Major sperm protein 55/57 OS=Caenorhabditis elegans GN=msp-55
PE=2 SV=3
Length = 127
Score = 30.4 bits (67), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCII 70
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++
Sbjct: 32 IKVINSSARRIVYGIKTTNMKRLGVDPPCGVLDPKEAVLL 71
>sp|P53020|MSP38_CAEEL Major sperm protein 38 OS=Caenorhabditis elegans GN=msp-38 PE=2
SV=2
Length = 127
Score = 30.4 bits (67), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCII 70
+KVIN++ + + +KTT+ K+ V P GV P ++ ++
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVFDPKEAVLL 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,246,232
Number of Sequences: 539616
Number of extensions: 3557203
Number of successful extensions: 8803
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 8726
Number of HSP's gapped (non-prelim): 70
length of query: 222
length of database: 191,569,459
effective HSP length: 113
effective length of query: 109
effective length of database: 130,592,851
effective search space: 14234620759
effective search space used: 14234620759
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)