Query 027514
Match_columns 222
No_of_seqs 132 out of 1241
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 11:03:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027514.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027514hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0331 FabD (acyl-carrier-pro 100.0 4.5E-47 9.7E-52 311.7 18.2 206 6-220 2-208 (310)
2 PLN02752 [acyl-carrier protein 100.0 1.7E-45 3.7E-50 310.5 23.0 215 3-220 35-251 (343)
3 TIGR00128 fabD malonyl CoA-acy 100.0 2.3E-44 5E-49 297.3 22.5 203 7-220 2-205 (290)
4 PF00698 Acyl_transf_1: Acyl t 100.0 3.7E-44 8E-49 299.7 18.5 192 9-220 1-198 (318)
5 TIGR03131 malonate_mdcH malona 100.0 3.7E-42 7.9E-47 285.0 21.2 194 8-220 1-194 (295)
6 smart00827 PKS_AT Acyl transfe 100.0 1.7E-41 3.7E-46 281.3 21.1 192 12-220 1-199 (298)
7 TIGR02813 omega_3_PfaA polyket 100.0 3.2E-37 7E-42 305.0 21.9 201 5-220 578-797 (2582)
8 KOG2926 Malonyl-CoA:ACP transa 100.0 1.3E-37 2.9E-42 250.2 13.1 215 4-221 60-276 (386)
9 TIGR02816 pfaB_fam PfaB family 100.0 5.4E-36 1.2E-40 261.6 16.0 194 5-219 180-403 (538)
10 KOG1202 Animal-type fatty acid 100.0 5.8E-33 1.3E-37 250.2 11.0 198 5-220 498-698 (2376)
11 COG3321 Polyketide synthase mo 100.0 1.2E-28 2.7E-33 231.4 13.8 197 7-220 526-728 (1061)
12 cd07198 Patatin Patatin-like p 95.0 0.17 3.6E-06 38.4 7.9 48 70-123 10-57 (172)
13 cd07205 Pat_PNPLA6_PNPLA7_NTE1 95.0 1.1 2.5E-05 33.8 13.5 114 71-193 13-130 (175)
14 cd07223 Pat_PNPLA5-mammals Pat 94.1 2.5 5.3E-05 36.5 13.3 122 67-194 18-147 (405)
15 cd07207 Pat_ExoU_VipD_like Exo 93.7 0.27 5.8E-06 37.9 6.6 48 70-123 11-58 (194)
16 cd07219 Pat_PNPLA1 Patatin-lik 93.7 1.9 4.2E-05 37.0 11.9 54 68-123 22-75 (382)
17 cd07221 Pat_PNPLA3 Patatin-lik 93.4 3.6 7.8E-05 33.4 13.0 53 70-124 12-64 (252)
18 cd07220 Pat_PNPLA2 Patatin-lik 93.3 1.8 3.8E-05 35.1 10.8 55 68-124 14-68 (249)
19 cd07210 Pat_hypo_W_succinogene 93.0 0.4 8.8E-06 38.0 6.7 117 70-196 12-133 (221)
20 cd07209 Pat_hypo_Ecoli_Z1214_l 93.0 0.34 7.3E-06 38.3 6.2 39 70-114 10-48 (215)
21 COG1752 RssA Predicted esteras 92.9 0.38 8.2E-06 40.1 6.6 48 70-123 23-70 (306)
22 cd07227 Pat_Fungal_NTE1 Fungal 92.6 0.46 1E-05 39.0 6.6 45 70-120 22-66 (269)
23 cd07218 Pat_iPLA2 Calcium-inde 92.6 4.6 0.0001 32.6 14.4 51 69-123 11-61 (245)
24 cd07204 Pat_PNPLA_like Patatin 92.4 4.9 0.00011 32.4 13.5 53 70-124 11-63 (243)
25 cd07228 Pat_NTE_like_bacteria 92.4 0.49 1.1E-05 36.0 6.2 45 70-120 12-56 (175)
26 cd07222 Pat_PNPLA4 Patatin-lik 92.4 5 0.00011 32.4 13.2 40 70-111 11-50 (246)
27 cd07225 Pat_PNPLA6_PNPLA7 Pata 92.0 0.61 1.3E-05 39.0 6.8 47 70-122 27-73 (306)
28 cd07224 Pat_like Patatin-like 91.6 1.4 3E-05 35.3 8.2 54 68-125 9-62 (233)
29 cd07229 Pat_TGL3_like Triacylg 91.3 0.75 1.6E-05 39.7 6.7 49 68-123 93-141 (391)
30 PRK10279 hypothetical protein; 90.1 0.56 1.2E-05 39.1 4.8 37 70-112 17-54 (300)
31 cd07212 Pat_PNPLA9 Patatin-lik 88.5 2 4.4E-05 36.0 7.0 77 72-159 13-89 (312)
32 cd07231 Pat_SDP1-like Sugar-De 88.3 2.1 4.6E-05 35.9 6.8 48 68-122 78-125 (323)
33 cd07206 Pat_TGL3-4-5_SDP1 Tria 88.1 2 4.4E-05 35.7 6.6 37 69-111 80-116 (298)
34 PF09752 DUF2048: Uncharacteri 87.6 2.2 4.8E-05 36.1 6.7 100 5-113 91-196 (348)
35 cd07230 Pat_TGL4-5_like Triacy 87.0 2 4.4E-05 37.6 6.4 46 70-122 85-130 (421)
36 cd07213 Pat17_PNPLA8_PNPLA9_li 86.2 2.6 5.6E-05 34.8 6.4 53 71-125 15-67 (288)
37 cd07232 Pat_PLPL Patain-like p 85.9 2.5 5.5E-05 36.8 6.3 47 70-123 79-125 (407)
38 cd07208 Pat_hypo_Ecoli_yjju_li 85.3 1.6 3.6E-05 35.4 4.7 38 71-114 11-50 (266)
39 cd07211 Pat_PNPLA8 Patatin-lik 83.7 5.6 0.00012 33.1 7.3 55 71-126 21-76 (308)
40 PRK11126 2-succinyl-6-hydroxy- 81.9 2.1 4.5E-05 33.7 3.9 31 77-113 57-87 (242)
41 COG3208 GrsT Predicted thioest 81.6 3.4 7.3E-05 33.2 4.9 21 90-110 72-92 (244)
42 cd07199 Pat17_PNPLA8_PNPLA9_li 79.1 9.9 0.00021 30.7 7.1 56 71-127 12-70 (258)
43 TIGR02427 protocat_pcaD 3-oxoa 78.3 9.4 0.0002 29.3 6.6 21 92-112 79-99 (251)
44 TIGR03695 menH_SHCHC 2-succiny 77.9 14 0.0003 28.2 7.4 21 92-112 70-90 (251)
45 TIGR03056 bchO_mg_che_rel puta 74.8 3.6 7.9E-05 32.8 3.4 29 78-112 87-115 (278)
46 TIGR02240 PHA_depoly_arom poly 74.6 4.5 9.7E-05 32.7 3.9 29 78-112 83-111 (276)
47 PLN02824 hydrolase, alpha/beta 74.4 4.5 9.8E-05 33.0 3.9 31 75-111 91-121 (294)
48 PRK13604 luxD acyl transferase 73.0 5.4 0.00012 33.4 4.0 32 75-112 97-128 (307)
49 PF12697 Abhydrolase_6: Alpha/ 72.7 6.1 0.00013 29.7 4.1 29 77-111 57-85 (228)
50 cd07217 Pat17_PNPLA8_PNPLA9_li 72.5 16 0.00034 31.2 6.8 82 92-174 41-130 (344)
51 PRK11071 esterase YqiA; Provis 70.6 6.8 0.00015 30.1 3.9 30 79-114 54-83 (190)
52 PRK03592 haloalkane dehalogena 70.5 6.4 0.00014 32.1 3.9 29 77-111 84-112 (295)
53 PRK00870 haloalkane dehalogena 70.0 6.4 0.00014 32.3 3.9 28 77-110 106-133 (302)
54 PF03958 Secretin_N: Bacterial 69.0 25 0.00054 22.6 5.9 34 166-199 44-77 (82)
55 TIGR03101 hydr2_PEP hydrolase, 68.6 8.6 0.00019 31.5 4.2 29 77-111 90-118 (266)
56 cd01819 Patatin_and_cPLA2 Pata 66.6 15 0.00032 27.2 4.9 36 71-110 11-46 (155)
57 PLN02965 Probable pheophorbida 66.3 7.1 0.00015 31.1 3.3 19 92-110 72-90 (255)
58 PRK08775 homoserine O-acetyltr 65.9 8.7 0.00019 32.3 3.9 29 77-111 128-157 (343)
59 TIGR01250 pro_imino_pep_2 prol 64.7 9.2 0.0002 30.2 3.7 21 92-112 96-116 (288)
60 PLN02679 hydrolase, alpha/beta 64.4 9.5 0.00021 32.4 3.9 26 77-108 146-171 (360)
61 PF06821 Ser_hydrolase: Serine 64.3 6.8 0.00015 29.7 2.7 20 91-110 54-73 (171)
62 PF00561 Abhydrolase_1: alpha/ 62.9 13 0.00029 28.3 4.2 22 86-111 42-63 (230)
63 TIGR03343 biphenyl_bphD 2-hydr 62.8 9.3 0.0002 30.7 3.4 28 78-111 93-120 (282)
64 TIGR01392 homoserO_Ac_trn homo 62.8 11 0.00023 31.9 3.9 29 77-111 117-146 (351)
65 PRK10349 carboxylesterase BioH 62.2 12 0.00026 29.7 3.9 20 92-111 74-93 (256)
66 PF01764 Lipase_3: Lipase (cla 61.8 7.3 0.00016 27.8 2.4 17 94-110 66-82 (140)
67 PLN02578 hydrolase 61.6 11 0.00024 31.8 3.9 28 78-111 144-171 (354)
68 cd07216 Pat17_PNPLA8_PNPLA9_li 60.5 35 0.00075 28.4 6.5 35 93-127 43-78 (309)
69 PRK10673 acyl-CoA esterase; Pr 59.8 14 0.0003 29.1 3.9 21 92-112 81-101 (255)
70 PF00756 Esterase: Putative es 59.8 11 0.00023 30.0 3.2 35 71-110 97-133 (251)
71 TIGR03611 RutD pyrimidine util 59.5 13 0.00029 28.8 3.8 20 92-111 80-99 (257)
72 COG2945 Predicted hydrolase of 58.5 12 0.00025 29.3 3.0 36 74-113 89-124 (210)
73 TIGR03100 hydr1_PEP hydrolase, 58.5 17 0.00036 29.6 4.2 32 75-110 87-118 (274)
74 cd07215 Pat17_PNPLA8_PNPLA9_li 57.1 49 0.0011 27.8 6.9 86 90-175 38-136 (329)
75 PRK07581 hypothetical protein; 56.6 16 0.00034 30.6 3.9 22 86-111 121-143 (339)
76 PLN02211 methyl indole-3-aceta 56.4 15 0.00032 29.9 3.6 20 92-111 87-106 (273)
77 PLN02894 hydrolase, alpha/beta 56.3 17 0.00036 31.6 4.1 20 92-111 176-195 (402)
78 PRK00175 metX homoserine O-ace 55.8 17 0.00036 31.2 4.0 30 77-112 137-167 (379)
79 cd07214 Pat17_isozyme_like Pat 55.1 56 0.0012 27.8 7.0 86 90-175 41-142 (349)
80 KOG4409 Predicted hydrolase/ac 55.1 15 0.00033 31.3 3.4 29 78-111 151-179 (365)
81 COG4188 Predicted dienelactone 53.2 13 0.00027 31.9 2.6 33 92-124 159-191 (365)
82 PF01734 Patatin: Patatin-like 52.8 13 0.00028 27.6 2.5 25 92-116 27-51 (204)
83 PF00975 Thioesterase: Thioest 52.4 16 0.00035 28.3 3.1 20 92-111 66-85 (229)
84 PRK06765 homoserine O-acetyltr 52.3 21 0.00047 30.9 4.0 30 76-110 150-179 (389)
85 PRK14875 acetoin dehydrogenase 51.8 20 0.00043 30.1 3.7 28 78-111 189-216 (371)
86 TIGR01738 bioH putative pimelo 51.6 24 0.00051 26.9 3.9 20 92-111 65-84 (245)
87 COG0596 MhpC Predicted hydrola 50.9 20 0.00042 27.2 3.4 20 92-111 88-107 (282)
88 PF00326 Peptidase_S9: Prolyl 50.8 20 0.00044 27.6 3.4 31 76-111 51-83 (213)
89 cd00519 Lipase_3 Lipase (class 50.8 13 0.00028 29.3 2.3 18 93-110 129-146 (229)
90 PF05798 Phage_FRD3: Bacteriop 49.6 60 0.0013 20.5 4.5 43 146-194 9-55 (75)
91 COG1054 Predicted sulfurtransf 49.3 84 0.0018 26.2 6.7 51 147-199 18-68 (308)
92 cd02394 vigilin_like_KH K homo 49.3 36 0.00078 20.5 3.8 47 143-195 14-61 (62)
93 PF05677 DUF818: Chlamydia CHL 49.3 1.2E+02 0.0025 26.1 7.7 95 5-109 136-232 (365)
94 PRK05320 rhodanese superfamily 49.0 76 0.0016 25.8 6.5 50 147-198 16-65 (257)
95 cd00741 Lipase Lipase. Lipase 49.0 16 0.00034 26.7 2.4 17 94-110 30-46 (153)
96 PHA02857 monoglyceride lipase; 48.9 28 0.00061 27.9 4.1 20 92-111 97-116 (276)
97 PRK01415 hypothetical protein; 48.8 85 0.0018 25.4 6.7 49 148-198 19-67 (247)
98 PRK10985 putative hydrolase; P 48.6 25 0.00053 29.4 3.8 16 92-107 131-146 (324)
99 KOG2872 Uroporphyrinogen decar 48.4 1.6E+02 0.0035 24.6 8.6 178 9-199 159-357 (359)
100 PF07819 PGAP1: PGAP1-like pro 48.2 15 0.00033 29.1 2.4 19 92-110 85-103 (225)
101 PF06028 DUF915: Alpha/beta hy 48.1 27 0.00059 28.4 3.8 28 78-110 94-121 (255)
102 PRK06489 hypothetical protein; 47.8 26 0.00056 29.7 3.9 20 92-111 153-173 (360)
103 PLN02733 phosphatidylcholine-s 47.1 26 0.00057 30.9 3.8 20 92-111 162-181 (440)
104 KOG2968 Predicted esterase of 46.8 58 0.0013 31.5 6.0 43 70-118 851-893 (1158)
105 PRK10566 esterase; Provisional 46.6 27 0.00058 27.5 3.6 19 93-111 108-126 (249)
106 PLN02872 triacylglycerol lipas 45.6 47 0.001 28.9 5.1 20 92-111 160-179 (395)
107 PF06057 VirJ: Bacterial virul 45.6 1.2E+02 0.0026 23.6 6.8 88 7-117 3-93 (192)
108 KOG2564 Predicted acetyltransf 45.0 18 0.00039 30.0 2.2 21 92-112 146-166 (343)
109 PRK10749 lysophospholipase L2; 44.2 36 0.00077 28.4 4.1 18 92-109 131-148 (330)
110 TIGR01249 pro_imino_pep_1 prol 43.5 35 0.00076 28.1 3.9 20 92-111 95-114 (306)
111 PF11288 DUF3089: Protein of u 43.2 44 0.00096 26.3 4.2 14 92-105 95-108 (207)
112 PF12695 Abhydrolase_5: Alpha/ 43.2 24 0.00052 24.9 2.6 20 92-111 61-80 (145)
113 PRK03204 haloalkane dehalogena 42.5 33 0.00072 27.9 3.6 27 78-110 93-119 (286)
114 TIGR01836 PHA_synth_III_C poly 42.2 36 0.00078 28.7 3.9 19 92-110 136-154 (350)
115 PF11187 DUF2974: Protein of u 42.1 20 0.00044 28.5 2.1 23 93-115 85-107 (224)
116 PF03959 FSH1: Serine hydrolas 41.6 38 0.00082 26.4 3.6 27 77-110 94-120 (212)
117 PRK11460 putative hydrolase; P 41.1 48 0.001 26.2 4.2 17 94-110 105-121 (232)
118 KOG1454 Predicted hydrolase/ac 40.9 35 0.00076 28.8 3.5 21 92-112 128-148 (326)
119 PF05728 UPF0227: Uncharacteri 40.4 45 0.00097 25.7 3.8 22 93-114 60-81 (187)
120 TIGR01840 esterase_phb esteras 40.1 44 0.00095 25.8 3.8 18 93-110 96-113 (212)
121 cd00707 Pancreat_lipase_like P 39.3 23 0.0005 29.0 2.2 22 92-113 112-133 (275)
122 PLN03087 BODYGUARD 1 domain co 39.2 37 0.00081 30.4 3.6 27 79-111 267-293 (481)
123 PF10230 DUF2305: Uncharacteri 39.1 24 0.00051 28.8 2.2 23 92-114 84-106 (266)
124 PF13117 Cag12: Cag pathogenic 38.5 1E+02 0.0022 21.8 5.0 37 168-204 73-109 (113)
125 PF10369 ALS_ss_C: Small subun 38.5 1E+02 0.0022 19.8 4.7 46 147-201 15-62 (75)
126 PLN02298 hydrolase, alpha/beta 37.9 26 0.00055 29.1 2.3 19 92-110 134-152 (330)
127 PF05277 DUF726: Protein of un 37.9 42 0.00091 28.6 3.5 34 74-111 206-239 (345)
128 KOG1553 Predicted alpha/beta h 37.3 47 0.001 28.5 3.6 45 70-124 297-353 (517)
129 PF12000 Glyco_trans_4_3: Gkyc 37.2 32 0.0007 26.2 2.5 18 78-101 58-75 (171)
130 PLN02385 hydrolase; alpha/beta 36.6 27 0.00058 29.4 2.2 19 92-110 162-180 (349)
131 PRK05855 short chain dehydroge 35.7 65 0.0014 28.9 4.7 21 92-112 94-114 (582)
132 COG2267 PldB Lysophospholipase 35.4 32 0.00069 28.6 2.4 18 92-109 107-124 (298)
133 TIGR03607 patatin-related prot 35.1 86 0.0019 29.8 5.3 20 92-111 66-85 (739)
134 PF09383 NIL: NIL domain; Int 35.0 69 0.0015 20.3 3.6 24 180-204 51-74 (76)
135 TIGR01607 PST-A Plasmodium sub 34.9 24 0.00051 29.7 1.6 16 92-107 142-157 (332)
136 TIGR03230 lipo_lipase lipoprot 34.6 59 0.0013 28.8 4.0 20 92-111 119-138 (442)
137 PRK04940 hypothetical protein; 34.3 40 0.00087 25.9 2.6 21 92-112 60-80 (180)
138 PF02519 Auxin_inducible: Auxi 32.7 61 0.0013 22.2 3.1 40 7-46 39-78 (100)
139 COG0400 Predicted esterase [Ge 32.0 72 0.0015 25.1 3.8 23 86-110 95-117 (207)
140 KOG2214 Predicted esterase of 31.7 53 0.0011 29.5 3.2 41 70-117 186-226 (543)
141 PLN02652 hydrolase; alpha/beta 30.3 80 0.0017 27.4 4.2 20 92-111 208-227 (395)
142 PRK14431 acylphosphatase; Prov 29.9 1.5E+02 0.0033 19.7 4.6 26 174-199 36-63 (89)
143 PLN03090 auxin-responsive fami 29.8 71 0.0015 22.2 3.0 21 26-46 62-82 (104)
144 PRK14450 acylphosphatase; Prov 29.7 1.4E+02 0.0031 19.9 4.5 20 179-198 45-64 (91)
145 PLN00021 chlorophyllase 28.7 38 0.00082 28.4 1.8 20 94-113 128-147 (313)
146 PLN03220 uncharacterized prote 28.6 65 0.0014 22.4 2.6 21 26-46 61-81 (105)
147 PF03403 PAF-AH_p_II: Platelet 28.2 48 0.001 28.6 2.4 15 94-108 230-244 (379)
148 PLN02454 triacylglycerol lipas 28.2 48 0.001 29.0 2.4 17 94-110 230-246 (414)
149 KOG2551 Phospholipase/carboxyh 28.2 67 0.0015 25.6 3.0 28 77-111 96-123 (230)
150 KOG3724 Negative regulator of 27.9 46 0.001 31.7 2.3 18 94-111 184-201 (973)
151 PLN00215 predicted protein; Pr 27.7 16 0.00035 23.9 -0.4 15 6-20 52-66 (110)
152 COG3607 Predicted lactoylgluta 27.6 1E+02 0.0022 22.2 3.5 36 169-204 63-101 (133)
153 PLN02442 S-formylglutathione h 27.4 81 0.0018 25.8 3.5 20 92-111 143-162 (283)
154 PLN03219 uncharacterized prote 26.9 71 0.0015 22.3 2.6 21 26-46 63-83 (108)
155 PLN02511 hydrolase 26.9 94 0.002 26.8 4.0 18 92-109 173-190 (388)
156 KOG1411 Aspartate aminotransfe 26.7 89 0.0019 26.9 3.6 39 139-177 373-411 (427)
157 PF04940 BLUF: Sensors of blue 25.1 1.1E+02 0.0024 20.5 3.3 55 144-199 12-68 (93)
158 COG1448 TyrB Aspartate/tyrosin 25.0 72 0.0016 27.6 2.8 48 137-195 344-392 (396)
159 COG2819 Predicted hydrolase of 24.8 53 0.0011 26.9 1.9 17 92-108 137-153 (264)
160 COG4757 Predicted alpha/beta h 24.7 62 0.0013 26.2 2.2 18 183-200 230-247 (281)
161 PRK10439 enterobactin/ferric e 24.7 59 0.0013 28.4 2.3 16 95-110 291-306 (411)
162 TIGR02821 fghA_ester_D S-formy 24.5 64 0.0014 26.2 2.4 20 92-111 138-157 (275)
163 KOG1552 Predicted alpha/beta h 24.2 75 0.0016 25.9 2.6 30 73-107 115-145 (258)
164 PRK14445 acylphosphatase; Prov 24.1 1.2E+02 0.0027 20.2 3.4 19 179-197 46-64 (91)
165 PRK05077 frsA fermentation/res 24.1 1.1E+02 0.0023 26.7 3.9 33 75-110 251-283 (414)
166 PLN02571 triacylglycerol lipas 24.0 61 0.0013 28.4 2.2 16 94-109 228-243 (413)
167 PRK14435 acylphosphatase; Prov 24.0 2E+02 0.0044 19.1 4.4 25 173-197 35-62 (90)
168 PRK14428 acylphosphatase; Prov 23.6 1.8E+02 0.0039 19.8 4.1 24 174-197 42-68 (97)
169 PRK14433 acylphosphatase; Prov 23.5 1.5E+02 0.0033 19.6 3.7 20 179-198 43-62 (87)
170 KOG3847 Phospholipase A2 (plat 23.0 31 0.00067 29.2 0.3 19 94-112 243-261 (399)
171 PRK15339 type III secretion sy 22.7 2.8E+02 0.0062 25.4 6.3 56 138-196 108-163 (559)
172 cd06214 PA_degradation_oxidore 22.7 1.2E+02 0.0026 23.8 3.6 25 176-200 206-230 (241)
173 PF07082 DUF1350: Protein of u 22.6 1.1E+02 0.0024 24.9 3.3 39 64-104 64-102 (250)
174 PRK14444 acylphosphatase; Prov 22.4 2.4E+02 0.0051 18.9 4.5 21 178-198 45-65 (92)
175 PRK14430 acylphosphatase; Prov 22.4 1.7E+02 0.0036 19.7 3.7 21 178-198 45-65 (92)
176 COG3545 Predicted esterase of 22.3 72 0.0016 24.5 2.1 19 92-110 59-77 (181)
177 PLN02847 triacylglycerol lipas 22.1 67 0.0014 29.6 2.2 16 95-110 254-269 (633)
178 cd03144 GATase1_ScBLP_like Typ 22.0 57 0.0012 23.0 1.4 39 8-47 46-85 (114)
179 PF02230 Abhydrolase_2: Phosph 21.9 1.6E+02 0.0034 22.8 4.1 17 94-110 107-123 (216)
180 PRK14438 acylphosphatase; Prov 21.9 1.5E+02 0.0032 19.8 3.4 24 174-197 37-63 (91)
181 TIGR02517 type_II_gspD general 21.8 4.1E+02 0.0088 24.4 7.3 56 140-200 101-156 (594)
182 PF08026 Antimicrobial_5: Bee 21.7 31 0.00066 18.7 -0.0 13 10-22 16-28 (39)
183 PRK14446 acylphosphatase; Prov 21.5 2.2E+02 0.0048 18.9 4.2 25 173-197 35-62 (88)
184 PF05057 DUF676: Putative seri 21.5 4E+02 0.0086 20.7 8.4 24 92-115 78-101 (217)
185 PRK14421 acylphosphatase; Prov 21.4 2.1E+02 0.0046 19.5 4.1 19 179-197 46-64 (99)
186 PRK10560 hofQ outer membrane p 21.4 2.9E+02 0.0063 23.9 6.0 51 145-200 100-150 (386)
187 PRK14423 acylphosphatase; Prov 21.4 2.3E+02 0.0051 18.9 4.3 21 178-198 46-66 (92)
188 COG0429 Predicted hydrolase of 21.3 4.3E+02 0.0093 22.6 6.6 88 5-108 74-165 (345)
189 PRK14447 acylphosphatase; Prov 21.3 1.6E+02 0.0035 19.8 3.5 19 179-197 47-65 (95)
190 COG0627 Predicted esterase [Ge 21.2 46 0.00099 28.0 0.9 18 93-110 153-170 (316)
191 PLN02980 2-oxoglutarate decarb 21.2 1.2E+02 0.0025 31.9 3.9 28 78-111 1437-1464(1655)
192 cd06217 FNR_iron_sulfur_bindin 21.1 1.3E+02 0.0029 23.4 3.6 25 176-200 201-225 (235)
193 PLN03084 alpha/beta hydrolase 21.0 1.4E+02 0.0031 25.8 3.9 27 78-110 189-215 (383)
194 smart00824 PKS_TE Thioesterase 20.9 1.6E+02 0.0035 21.8 3.9 20 92-111 64-83 (212)
195 COG4370 Uncharacterized protei 20.8 90 0.0019 26.4 2.5 14 6-19 330-343 (412)
196 PF00151 Lipase: Lipase; Inte 20.5 1.1E+02 0.0023 26.0 3.0 21 95-115 153-173 (331)
197 PF07302 AroM: AroM protein; 20.4 3.7E+02 0.008 21.4 5.8 64 143-214 35-100 (221)
198 TIGR02516 type_III_yscC type I 20.4 3.3E+02 0.007 24.2 6.2 56 141-199 80-135 (462)
199 PF04405 ScdA_N: Domain of Unk 20.3 2.2E+02 0.0047 17.2 3.7 15 71-87 10-24 (56)
200 KOG1250 Threonine/serine dehyd 20.2 2.3E+02 0.0049 25.0 4.8 107 94-209 115-224 (457)
201 PRK14436 acylphosphatase; Prov 20.2 1.8E+02 0.0039 19.4 3.6 20 178-197 45-64 (91)
202 PLN02408 phospholipase A1 20.1 82 0.0018 27.2 2.2 17 94-110 202-218 (365)
203 PF03583 LIP: Secretory lipase 20.0 79 0.0017 26.1 2.1 19 92-110 71-89 (290)
No 1
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=100.00 E-value=4.5e-47 Score=311.73 Aligned_cols=206 Identities=39% Similarity=0.603 Sum_probs=193.5
Q ss_pred CcEEEEEcCcccchHHhhHh-hhccHHHHHHHHHHHHHcCCChHHHhhcCCCccccCccchhhHHHHHHHHHHHHHHHhc
Q 027514 6 SLLLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARD 84 (222)
Q Consensus 6 ~~~~~~F~GqG~~~~~~~~~-~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~a~~~~l~~~~ 84 (222)
.+++|+|||||+||.+|+++ |.+++.+++.++++++.+++++.+++.++++..+..+.++||++++++++.++.|++.+
T Consensus 2 ~~~A~~FpGQGsQ~~gMg~~l~~~~~~a~~~~~~a~~~l~~~l~~i~~~~p~~~L~~T~~tQPal~~~s~a~~~~l~~~~ 81 (310)
T COG0331 2 SKTAFVFPGQGSQSLGMGKDLYENSPEAKETFDEADEALGFDLWALVFEGPEEELNLTQNTQPALLLVSLAAYRVLAEQG 81 (310)
T ss_pred CcceEEeCCchHHHHHhHHHHHhccHHHHHHHHHHHHHhcccHHHHhcCCCHHHhcccchhhHHHHHHHHHHHHHHHHhc
Confidence 35899999999999999999 78899999999999999999999999988888899999999999999999999999984
Q ss_pred CCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCHHHHHHHHHHhcccCCC
Q 027514 85 GGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDE 164 (222)
Q Consensus 85 ~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~ 164 (222)
+++ +|++++|||+|||+|++++|+++++++++++..|+.+|+++.+.+.+.|.++.|++.++++++|++.+.
T Consensus 82 ~~~----~p~~~aGHSlGEysAl~~ag~~~~ed~~~Lv~~RG~~M~~a~p~~~g~Maav~gl~~e~v~~~~~~~~~---- 153 (310)
T COG0331 82 LGV----KPDFVAGHSLGEYSALAAAGVLSFEDALKLVRKRGKLMQEAVPRGEGGMAAVLGLDDEQVEKACEEAAQ---- 153 (310)
T ss_pred CCC----CCceeecccHhHHHHHHHcccccHHHHHHHHHHHHHHHHHHccCCCccHHHHcCCCHHHHHHHHHHhcc----
Confidence 346 999999999999999999999999999999999999999998778899999999999999999999764
Q ss_pred CCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCCCCCCCCCC
Q 027514 165 DNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS 220 (222)
Q Consensus 165 ~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p~Hs~~~~~ 220 (222)
...++|+++|+|+|+||||++++|+++.+.+++.+.++..+|+++ .|||||+|..
T Consensus 154 ~~~v~iaN~N~~~QiVIsG~~~ale~a~~~~~~~g~kr~i~l~vs-~pfHs~lm~p 208 (310)
T COG0331 154 GTVVEIANYNSPGQIVISGTKEALEKAAEILKEAGAKRAIPLPVS-GPFHSPLMKP 208 (310)
T ss_pred CCeEEEeeeCCCCcEEEECCHHHHHHHHHHHHHhhhhhhcccCCC-chhhhhhhHH
Confidence 236999999999999999999999999999999998888999999 9999999864
No 2
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=100.00 E-value=1.7e-45 Score=310.52 Aligned_cols=215 Identities=70% Similarity=0.990 Sum_probs=193.0
Q ss_pred CCCCcEEEEEcCcccchHHhhHhhhccHHHHHHHHHHHHHcCCChHHHhhcCCCccccCccchhhHHHHHHHHHHHHHHH
Q 027514 3 MARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRA 82 (222)
Q Consensus 3 m~~~~~~~~F~GqG~~~~~~~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~a~~~~l~~ 82 (222)
+.+++++|+|||||+||.+|+++|.++|.|++.+++|++++|+++.+++...+...+.++.++||+||++|++++++|++
T Consensus 35 ~~~~~~a~lFpGQGsq~~gm~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~l~~~~~~qp~i~~~~~a~~~~l~~ 114 (343)
T PLN02752 35 DYKPTTAFLFPGQGAQAVGMGKEAAEVPAAKALFDKASEILGYDLLDVCVNGPKEKLDSTVVSQPAIYVASLAAVEKLRA 114 (343)
T ss_pred CCCCCEEEEECCCCcchhhHHHHHHhCHHHHHHHHHHHHHhCCCHHHHHhcCCHHHHhcchhhhHHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999999999999988776666888999999999999999999999
Q ss_pred hcCCCC--cccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCHHHHHHHHHHhcc
Q 027514 83 RDGGQQ--IIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQ 160 (222)
Q Consensus 83 ~~~gi~--~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~ 160 (222)
+ |+. .+.+|++++|||+|||+|++++|+++++++++++..|+++|+......+++|++|++++.+++++++++++.
T Consensus 115 ~--g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ls~e~al~lv~~R~~~m~~~~~~~~g~m~av~g~~~~~~~~~l~~~~~ 192 (343)
T PLN02752 115 R--DGGQAVIDSVDVCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAADAGPSGMVSVIGLDSDKVQELCAAANE 192 (343)
T ss_pred c--CCCcccccCCCeeeeccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhccCCCccEEEEeCCCHHHHHHHHHHhhh
Confidence 8 641 123568899999999999999999999999999999999998875556799999999999999999998875
Q ss_pred cCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCCCCCCCCCC
Q 027514 161 EVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS 220 (222)
Q Consensus 161 ~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p~Hs~~~~~ 220 (222)
......+++|+++|+|+++||||+++.++++.+.+++.+..+.++|+++ .|||||+|.+
T Consensus 193 ~~~~~~~v~IA~~Nsp~~~vIsG~~~~l~~l~~~l~~~~~~~~~~L~v~-~pfHsp~m~~ 251 (343)
T PLN02752 193 EVGEDDVVQIANYLCPGNYAVSGGKKGIDAVEAKAKSFKARMTVRLAVA-GAFHTSFMEP 251 (343)
T ss_pred ccCCCCeEEEEEEcCCCCEEEECcHHHHHHHHHHHHhcCCceEEECCCC-CCcchHHHHH
Confidence 4444567999999999999999999999999999998776688899999 9999999863
No 3
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=100.00 E-value=2.3e-44 Score=297.32 Aligned_cols=203 Identities=40% Similarity=0.640 Sum_probs=185.0
Q ss_pred cEEEEEcCcccchHHhhHh-hhccHHHHHHHHHHHHHcCCChHHHhhcCCCccccCccchhhHHHHHHHHHHHHHHHhcC
Q 027514 7 LLLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDG 85 (222)
Q Consensus 7 ~~~~~F~GqG~~~~~~~~~-~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~a~~~~l~~~~~ 85 (222)
+++|+|||||+||.+|+++ |..+|.||+.+++|++++|+++.+++.+.+...+.++.+.|+++|++|++++++|++++
T Consensus 2 ~~~~~f~Gqg~~~~~m~~~l~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~~~~~al~~~l~~~g- 80 (290)
T TIGR00128 2 KIAYVFPGQGSQTVGMGKDLYEQYPIAKELFDQASEALGYDLKKLCQEGPAEELNKTQYTQPALYVVSAILYLKLKEQG- 80 (290)
T ss_pred CEEEEECCCCcchhhhHHHHHHcCHHHHHHHHHHHHHhCcCHHHHHhCCCHHHhccccchhHHHHHHHHHHHHHHHHcC-
Confidence 3899999999999999999 68999999999999999999999998866555677889999999999999999999993
Q ss_pred CCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCHHHHHHHHHHhcccCCCC
Q 027514 86 GQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDED 165 (222)
Q Consensus 86 gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~~ 165 (222)
|+ +|++++|||+||++|++++|+++++|+++++..|+++|++......+.|+++++.+.+++++.+++++ .
T Consensus 81 ~i----~p~~v~GhS~GE~aAa~~aG~ls~eda~~lv~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~-----~ 151 (290)
T TIGR00128 81 GL----KPDFAAGHSLGEYSALVAAGALDFETALKLVKKRGELMQEAVPEGGGAMAAVIGLDEEQLAQACEEAT-----E 151 (290)
T ss_pred CC----CCCEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEeCCCHHHHHHHHHhcC-----C
Confidence 39 99999999999999999999999999999999999999987545578899888999999999998763 1
Q ss_pred CcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCCCCCCCCCC
Q 027514 166 NKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS 220 (222)
Q Consensus 166 ~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p~Hs~~~~~ 220 (222)
..++|+++|+|++++|+|+++.++++.+.+++.+.++.+.||+. .|||||+|.+
T Consensus 152 ~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~-~~fHs~~l~~ 205 (290)
T TIGR00128 152 NDVDLANFNSPGQVVISGTKDGVEAAAALFKEMGAKRAVPLEVS-GAFHSRFMKP 205 (290)
T ss_pred CcEEEEEECCCCCEEEECCHHHHHHHHHHHHHcCCCeEEEcCCC-CCcccHHHHH
Confidence 45899999999999999999999999999999887678899999 9999998753
No 4
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=100.00 E-value=3.7e-44 Score=299.75 Aligned_cols=192 Identities=35% Similarity=0.508 Sum_probs=167.8
Q ss_pred EEEEcCcccchHHhhHh-hhccHHHHHHHHHHHHHc----CCChHHHhhcCCC-ccccCccchhhHHHHHHHHHHHHHHH
Q 027514 9 LFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPK-EKLDSTIISQPAIYVTSLAAVELLRA 82 (222)
Q Consensus 9 ~~~F~GqG~~~~~~~~~-~~~~p~~~~~~~~~~~~l----g~~l~~~~~~~~~-~~~~~~~~~~~~i~~~~~a~~~~l~~ 82 (222)
+|+|||||+||.+|+++ |..+|.|++.+++|++++ |+++.+++.+++. ..+.++.+.||+||++|++++++|++
T Consensus 1 vFlFpGQGsq~~gMg~~L~~~~p~f~~~~~~~~~~l~~~~g~~l~~~l~~~~~~~~l~~~~~~qpai~~~~~al~~~l~~ 80 (318)
T PF00698_consen 1 VFLFPGQGSQYPGMGRDLYENNPVFRETIDRCDEILKELLGFSLLELLFEGPESEDLNDTEYAQPAIFAIQVALARLLRS 80 (318)
T ss_dssp EEEE--TTS--TTTTHHHHHH-HHHHHHHHHHHHHHTSHHTS-HHHHHHHTTHCHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEECCcchhhHhHHHHHHHcChhhHHHHHhhhhhhhcccccchhhhhhcccccccccchheecchhhhhhhhhhhhhcc
Confidence 69999999999999999 688899999999999874 8999999887764 67889999999999999999999999
Q ss_pred hcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCHHHHHHHHHHhcccC
Q 027514 83 RDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEV 162 (222)
Q Consensus 83 ~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~ 162 (222)
+ |+ +|++++|||+||++|++++|++++++++++++.|+++|++.. .+|.|++|.+ +..+..+..
T Consensus 81 ~--Gi----~P~~v~GhSlGE~aA~~aaG~ls~e~a~~lv~~R~~~m~~~~--~~g~m~av~~---~~~~~~~~~----- 144 (318)
T PF00698_consen 81 W--GI----KPDAVIGHSLGEYAALVAAGALSLEDALRLVYERARLMDEAA--PPGAMLAVRG---EEEEEKLAL----- 144 (318)
T ss_dssp T--TH----CESEEEESTTHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHS--TSEEEEEEES---HHHHHHHHT-----
T ss_pred c--cc----ccceeeccchhhHHHHHHCCccchhhhhhhHHHHHHHHHHhh--hcccccchhh---hHHhhhccc-----
Confidence 9 88 999999999999999999999999999999999999999874 7789999954 333333331
Q ss_pred CCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCCCCCCCCCC
Q 027514 163 DEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS 220 (222)
Q Consensus 163 ~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p~Hs~~~~~ 220 (222)
..+++|+++|+|+++||||++++++++.+.+++.++ +++.|++. .|||||+|.+
T Consensus 145 --~~~v~ia~~Ns~~q~visG~~~~l~~~~~~l~~~~~-~~~~l~v~-~afHs~~m~~ 198 (318)
T PF00698_consen 145 --PPDVEIANINSPRQVVISGEREALEALVERLKAEGI-KAKRLPVS-YAFHSPLMEP 198 (318)
T ss_dssp --TTTEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTS-EEEEESSS-SETTSGGGHH
T ss_pred --cccceeeeeccccccccCCCHHHHHHHHHHhhccce-eEEEeeee-ccccCchhhh
Confidence 567999999999999999999999999999999997 89999999 9999999863
No 5
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=100.00 E-value=3.7e-42 Score=284.98 Aligned_cols=194 Identities=30% Similarity=0.384 Sum_probs=176.6
Q ss_pred EEEEEcCcccchHHhhHhhhccHHHHHHHHHHHHHcCCChHHHhhcCCCccccCccchhhHHHHHHHHHHHHHHHhcCCC
Q 027514 8 LLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQ 87 (222)
Q Consensus 8 ~~~~F~GqG~~~~~~~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~a~~~~l~~~~~gi 87 (222)
++|+|||||+||.+|++++.++|.|++.++++++.+++++.++ . +...+.++.++||+++++|++++++|+++ |+
T Consensus 1 ~~~~F~GqG~q~~~m~~~l~~~p~~~~~~~~~~~~l~~~~~~~-~--~~~~l~~~~~~qp~i~~~q~al~~~l~~~--g~ 75 (295)
T TIGR03131 1 IALLFPGQGSQRAGMLAELPDHPAVAAVLAEASDVLGIDPREL-D--DAEALASTRSAQLCILAAGVAAWRALLAL--LP 75 (295)
T ss_pred CEEEECCcchhhhhHHHHHHhCHHHHHHHHHHHHHhCcCHHHc-C--CHhhhccchhhhHHHHHHHHHHHHHHHhc--CC
Confidence 5799999999999999998788999999999999999999884 2 23446788999999999999999999999 88
Q ss_pred CcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCHHHHHHHHHHhcccCCCCCc
Q 027514 88 QIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNK 167 (222)
Q Consensus 88 ~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~~~~ 167 (222)
+|++++|||+||++|++++|+++++|+++++..|+++|+.... ..+.|+++.+++.++++++++++ .
T Consensus 76 ----~P~~v~GhS~GE~aAa~~aG~~s~e~a~~lv~~r~~~~~~~~~-~~~~m~av~~~~~~~~~~~l~~~--------~ 142 (295)
T TIGR03131 76 ----RPSAVAGYSVGEYAAAVVAGVLTFDDALRLVALRAALMDQAVP-GGYGMLAVLGLDLAAVEALIAKH--------G 142 (295)
T ss_pred ----CCcEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcC-CCCCEEEEeCCCHHHHHHHHHHc--------C
Confidence 9999999999999999999999999999999999999987642 35579888899999999999863 3
Q ss_pred EEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCCCCCCCCCC
Q 027514 168 VQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS 220 (222)
Q Consensus 168 ~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p~Hs~~~~~ 220 (222)
++|+++|+|+++||||+++.++++.+.+++.|..++++|++. .|||||+|.+
T Consensus 143 v~ia~~Nsp~~~visG~~~~l~~l~~~l~~~g~~~~~~l~v~-~afHs~~~~~ 194 (295)
T TIGR03131 143 VYLAIINAPDQVVIAGSRAALRAVAELARAAGASRAKRLAVR-VPSHTPLLAK 194 (295)
T ss_pred EEEEEEcCCCCEEEECCHHHHHHHHHHHHhcCCceEEECCCC-CCcccHHHHH
Confidence 999999999999999999999999999999988788999999 9999998753
No 6
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=100.00 E-value=1.7e-41 Score=281.31 Aligned_cols=192 Identities=27% Similarity=0.398 Sum_probs=176.7
Q ss_pred EcCcccchHHhhHh-hhccHHHHHHHHHHHHHc----CCChHHHhhcCCC--ccccCccchhhHHHHHHHHHHHHHHHhc
Q 027514 12 VLSQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPK--EKLDSTIISQPAIYVTSLAAVELLRARD 84 (222)
Q Consensus 12 F~GqG~~~~~~~~~-~~~~p~~~~~~~~~~~~l----g~~l~~~~~~~~~--~~~~~~~~~~~~i~~~~~a~~~~l~~~~ 84 (222)
|||||+||++|+++ |..+|.|++.++++++++ |+++.+++...+. ..+.++.++||++|++|++++++|+++
T Consensus 1 F~GQG~q~~~m~~~l~~~~~~~~~~~~~~~~~l~~~~g~~~~~~l~~~~~~~~~l~~~~~~q~~i~~~~~a~~~~l~~~- 79 (298)
T smart00827 1 FTGQGSQWPGMGRELYETEPVFRAALDECDAALQPLLGWSLLDVLFGEDGAASLLRRTEVAQPALFAVQVALARLWRSW- 79 (298)
T ss_pred CCCCchhHHHHHHHHHHcCHHHHHHHHHHHHHHHHhcCCCHHHHHcCCCCchhhhcccchhHHHHHHHHHHHHHHHHHc-
Confidence 89999999999999 578999999999999986 9999999876543 346788999999999999999999998
Q ss_pred CCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCHHHHHHHHHHhcccCCC
Q 027514 85 GGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDE 164 (222)
Q Consensus 85 ~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~ 164 (222)
|+ +|++++|||+||++|++++|+++++++++++..|+.+|++.. ..|.|++| +.+.+++++.++++
T Consensus 80 -Gi----~p~~~~GhSlGE~aA~~~ag~~~~~~~l~l~~~r~~~~~~~~--~~g~m~av-~~~~~~~~~~l~~~------ 145 (298)
T smart00827 80 -GV----RPDAVVGHSLGEIAAAYVAGVLSLEDAARLVAARGRLMQALP--GGGAMLAV-GLSEEEVEELLAGY------ 145 (298)
T ss_pred -CC----cccEEEecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcC--CCCeEEEE-eCCHHHHHHHHHhc------
Confidence 99 999999999999999999999999999999999999999874 46889999 99999999999876
Q ss_pred CCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCCCCCCCCCC
Q 027514 165 DNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS 220 (222)
Q Consensus 165 ~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p~Hs~~~~~ 220 (222)
..+++|+++|+|++++|+|+++.++++.+.++..++ ++++|++. .|||||+|.+
T Consensus 146 ~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~-~~~~L~v~-~~fHs~~~~~ 199 (298)
T smart00827 146 GGRVSVAAVNGPSSVVLSGDEDAVDELAAALEARGI-RARRLKVD-HAFHSPHMDP 199 (298)
T ss_pred CCcEEEEEEcCCCCEEEECCHHHHHHHHHHHHHCCc-eEEECCCC-CCCchHHHHH
Confidence 346999999999999999999999999999999998 88999999 9999998753
No 7
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=100.00 E-value=3.2e-37 Score=304.95 Aligned_cols=201 Identities=24% Similarity=0.248 Sum_probs=173.7
Q ss_pred CCcEEEEEcCcccchHHhhHh-hhccHHHHHHHHHHHHHcC----CChHHHhhcC----------CCccccCccchhhHH
Q 027514 5 RSLLLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDILG----FDLLEICTNG----------PKEKLDSTIISQPAI 69 (222)
Q Consensus 5 ~~~~~~~F~GqG~~~~~~~~~-~~~~p~~~~~~~~~~~~lg----~~l~~~~~~~----------~~~~~~~~~~~~~~i 69 (222)
.++++|+|||||+||.+|+++ |..+|.||+.+++|+++++ .++.++++.. ....+.++.++||+|
T Consensus 578 ~~kvaflFpGQGSQy~gMgreL~~~~P~fr~~ld~~d~~l~~~~~~~L~~~l~p~~~~~~~~~~~~~~~L~~t~~aQPaI 657 (2582)
T TIGR02813 578 SGKVAALFAGQGSQYLNMGRELACNFPEVRQAAADMDSVFTQAGKGALSPVLYPIPVFNDESRKAQEEALTNTQHAQSAI 657 (2582)
T ss_pred CCceEEEeCCCCchhHHHHHHHHhcCHHHHHHHHHHHHHhhhhcCCcHHHHhccccccccccccchhhhhccchhHHHHH
Confidence 468999999999999999999 6899999999999999874 4566665421 123477899999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhc-cCCCceEEEcCC--
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAAD-AAKGAMVSIIGL-- 146 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~-~~~g~m~av~~~-- 146 (222)
+++|++++++|+++ |+ +|++++|||+|||+|+|++|+|+++|++++++.|+++|..... ...|+|+++...
T Consensus 658 ~a~q~Al~~lL~~~--Gi----~Pd~v~GHSlGE~aAa~aAGvls~edal~Lv~~Rg~lm~~~~~~~~~G~M~AV~l~~~ 731 (2582)
T TIGR02813 658 GTLSMGQYKLFTQA--GF----KADMTAGHSFGELSALCAAGVISDDDYMMLAFSRGQAMAAPTGEADIGFMYAVILAVV 731 (2582)
T ss_pred HHHHHHHHHHHHHc--CC----ccceeecCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccCCCCceeEEEEcccc
Confidence 99999999999998 99 9999999999999999999999999999999999999987643 235899998421
Q ss_pred -CHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCCCCCCCCCC
Q 027514 147 -DSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS 220 (222)
Q Consensus 147 -~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p~Hs~~~~~ 220 (222)
+.+.+++.+.. ..+++|+++|+|+++||||+.+.++++.+.+++.|+ ++++|++. .|||||+|..
T Consensus 732 ~~~~~v~~~l~~-------~~~V~IA~~NsP~qvVISG~~~ai~~l~~~L~~~Gi-~a~~L~Vs-~AFHSplm~~ 797 (2582)
T TIGR02813 732 GSPTVIANCIKD-------FEGVSIANYNSPTQLVIAGVSTQIQIAAKALKEKGF-KAIPLPVS-GAFHTPLVAH 797 (2582)
T ss_pred ccHHHHHHHhcc-------CCCEEEEEEecCCCEEEECCHHHHHHHHHHHHhCCC-eEEECCCC-CCcCcHHHHH
Confidence 34566666643 346999999999999999999999999999999999 99999999 9999998853
No 8
>KOG2926 consensus Malonyl-CoA:ACP transacylase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-37 Score=250.20 Aligned_cols=215 Identities=47% Similarity=0.675 Sum_probs=195.0
Q ss_pred CCCcEEEEEcCcccchHHhhHhhhccHHHHHHHHHHHHHcCCChHHHhhcCCCccccCccchhhHHHHHHHHHHHHHHHh
Q 027514 4 ARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRAR 83 (222)
Q Consensus 4 ~~~~~~~~F~GqG~~~~~~~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~a~~~~l~~~ 83 (222)
.+.--+++|||||.||.+|++.+.++|..++.+++|++++|+++++.+.+++++.++++.+.||+|++.++|..+.++..
T Consensus 60 ~~e~s~iLFPGQG~q~vgm~q~~l~~p~a~~~~~~A~~vl~YdLlki~~~gP~e~ldrT~~~QpAI~~~SlAa~E~l~~~ 139 (386)
T KOG2926|consen 60 PKETSVILFPGQGAQSVGMGQYLLQNPAARRLFAEASNVLGYDLLKICVNGPKEKLDRTVIAQPAIDVSSLAALEQLRLL 139 (386)
T ss_pred cccceEEEeCCCChhhhhhhHHHHhCcchhHHHHHHHHHhhHHHHHHHhcCccchhhcccccccceecccHHHHHhcccc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCHHHHHHHHHHhcccCC
Q 027514 84 DGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVD 163 (222)
Q Consensus 84 ~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~ 163 (222)
.+++ ++.-++..|||+|||+|++++|+++++++++++..|+..|+++..--.+.|..+.+.+..++...+...+....
T Consensus 140 ~p~~--ie~~~~~aGfSlGEy~alvfa~aLsFs~alKlVk~Ra~AMs~a~~~~~~~m~~~~~~p~sk~~~~~~~a~~~~~ 217 (386)
T KOG2926|consen 140 GPSI--IENLVVTAGFSLGEYAALVFAGALSFSSALKLVKARAEAMSEASELVASGMVMILGLPTSKVQKACASANQLSA 217 (386)
T ss_pred Ccch--hheeeeeccccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccceeecCcHhHHHHHHhhhHHHhh
Confidence 5454 44567889999999999999999999999999999999999987667788999989999999999988764322
Q ss_pred --CCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCCCCCCCCCCC
Q 027514 164 --EDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTSS 221 (222)
Q Consensus 164 --~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p~Hs~~~~~~ 221 (222)
+...++||++|+|+++||+|..++|+-+.+..++.++++.++|+++ +||||++|.+.
T Consensus 218 ~qe~~~~~VANyl~~~~~VvsG~~~~Le~lee~~~sf~~~r~~~LaVs-gAFHTr~MepA 276 (386)
T KOG2926|consen 218 SQEYPVCEVANYLSPGQRVVSGLVKALESLEENAKSFKIRRMKRLAVS-GAFHTRLMEPA 276 (386)
T ss_pred hccCCeeeeeccCCCCcEEeeCcHHHHHHHHHHHHhhhhhhheeeeec-cccchhhhhhh
Confidence 3467899999999999999999999999999999999999999999 99999998753
No 9
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=100.00 E-value=5.4e-36 Score=261.61 Aligned_cols=194 Identities=15% Similarity=0.066 Sum_probs=159.5
Q ss_pred CCcEEEEEcCcccchHHhhHh-hhccHHHHHHHHHHHHHcCCChHHHhhcCC-----CccccCccchhhHHHH--HHHHH
Q 027514 5 RSLLLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGP-----KEKLDSTIISQPAIYV--TSLAA 76 (222)
Q Consensus 5 ~~~~~~~F~GqG~~~~~~~~~-~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~-----~~~~~~~~~~~~~i~~--~~~a~ 76 (222)
+++++|+|||||+||++|+++ |..+|.|++.++++. ++.+.+..+. .....+..+.|+++|+ +++++
T Consensus 180 ~~~vaFvFpGqGsqy~gMGr~L~~~~P~fr~~ld~~~-----~L~~~L~~~~~~~~~~~~~~~~~l~q~alfav~~~~aL 254 (538)
T TIGR02816 180 KAGLAFVYPGVGTVYADMFNDFHQYFPALFAKLEREG-----DLKAMLQAEDIYGEDPKHAAEMSLGDLAIAGVGSSYLL 254 (538)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhhCHHHHHHHHhcC-----CHHHHhccccccccchhhhhhhhhHhHHHHHHHHHHHH
Confidence 568999999999999999999 799999999999874 5666554221 2223455678899985 59999
Q ss_pred HHHHH-HhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhc----------------cCCCc
Q 027514 77 VELLR-ARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAAD----------------AAKGA 139 (222)
Q Consensus 77 ~~~l~-~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~----------------~~~g~ 139 (222)
+++|+ ++ || +|++++|||+||++|++++|+|+++|++..+..|+.+++...+ ...++
T Consensus 255 a~ll~~~~--GI----~Pdav~GHSlGE~aAa~aAGvls~~dal~~v~~rs~L~~~~~rG~mmavr~a~~~~~~~~~~~~ 328 (538)
T TIGR02816 255 TQLLCDEF--AI----KPDFALGYSKGEASMWASLGVWKNPHALIEKTQTDPIFTSAISGKLTAVREAWQLDDTAAEIQW 328 (538)
T ss_pred HHHHHHhc--CC----CCCEEeecCHHHHHHHHHhCCCCcHHHHHHHHHhhHHhccccChhhhhhhhhhccccccccccc
Confidence 99995 66 99 9999999999999999999999999999999998888854210 01334
Q ss_pred eEEEcCCCHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCC-----CC
Q 027514 140 MVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIP-----IQ 214 (222)
Q Consensus 140 m~av~~~~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p-----~H 214 (222)
|.++++.+.++++++|+. ..+++|+++|+ +++||||++++++++.+.+++.|+ ++++|++. ++ ||
T Consensus 329 ~~avV~a~~~~V~~~L~~-------~~~V~IAaiN~-~q~VISG~~~Ai~~l~~~L~~~Gi-~~r~L~a~-HA~pam~~H 398 (538)
T TIGR02816 329 NSFVVRCEAAPIEALLKD-------FPHAYLAIIQG-DTCVIAGCEAQCKALLAALGKRGI-AANRVTAM-HTQPALQEH 398 (538)
T ss_pred cceeecCCHHHHHHHhcc-------CCCeEEEEeCC-CCeEeeCCHHHHHHHHHHHHhCCe-eeeecccc-ccCcccccc
Confidence 445558999999999975 33599999998 799999999999999999999999 88999887 55 78
Q ss_pred CCCCC
Q 027514 215 CHPCT 219 (222)
Q Consensus 215 s~~~~ 219 (222)
|++++
T Consensus 399 S~~me 403 (538)
T TIGR02816 399 QNVMD 403 (538)
T ss_pred cHHHH
Confidence 87654
No 10
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=100.00 E-value=5.8e-33 Score=250.15 Aligned_cols=198 Identities=20% Similarity=0.263 Sum_probs=185.3
Q ss_pred CCcEEEEEcCcccchHHhhHhhhccHHHHHHHHHHHHHc---CCChHHHhhcCCCccccCccchhhHHHHHHHHHHHHHH
Q 027514 5 RSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDIL---GFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLR 81 (222)
Q Consensus 5 ~~~~~~~F~GqG~~~~~~~~~~~~~p~~~~~~~~~~~~l---g~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~a~~~~l~ 81 (222)
.+++.|+++|.|+||.+|+.++.+.+.|+..+.++++.+ |.|+.+.+.+.++..+++..++.++|.++|+|+.++|.
T Consensus 498 eRPiwfiysGMGsQW~~Ma~~LMkl~~F~dsi~~~ae~l~~~gldv~~vL~~s~~~tfdn~l~sfvsitAiQiaLtDlLs 577 (2376)
T KOG1202|consen 498 ERPIWFIYSGMGSQWAGMAKDLMKLERFRDSIQRSAEVLKPFGLDVIDVLTRSDESTFDNILNSFVSITAIQIALTDLLS 577 (2376)
T ss_pred CcceEEEEeCCcchhhHHHHHHhhhHHHHHHHHHHHhhhcccCcchhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999986 89999999888777788899999999999999999999
Q ss_pred HhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCHHHHHHHHHHhccc
Q 027514 82 ARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQE 161 (222)
Q Consensus 82 ~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~ 161 (222)
.. || +||.++|||+||+.|.|+.|+++.|+++..+++|++.+.+. ..++|.|.+| |++.|++.+-+
T Consensus 578 ~l--gi----~PDGIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~-~l~kGaMAAV-GLsWEq~~~~~------ 643 (2376)
T KOG1202|consen 578 CL--GI----RPDGIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDT-HLPKGAMAAV-GLSWEQCKSRC------ 643 (2376)
T ss_pred hc--CC----CCCcccccccchhcccccccccCHHHHHHHHHHcCceeccc-cCCCcchhhh-cCCHHHHhccC------
Confidence 98 99 99999999999999999999999999999999999987766 4688999999 99999988876
Q ss_pred CCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCCCCCCCCCC
Q 027514 162 VDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS 220 (222)
Q Consensus 162 ~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p~Hs~~~~~ 220 (222)
+..++-+|.||.+.++||||++.+.+++++|++.|+ .++.++..++|||||+|..
T Consensus 644 ---P~~~~paCHNs~D~~TiSGp~a~v~~~v~qL~~~gv-Fak~V~t~G~aFHS~~m~a 698 (2376)
T KOG1202|consen 644 ---PPDVVPACHNSKDNVTISGPQASVFAFVEQLRAEGV-FAKEVRTGGYAFHSPYMEA 698 (2376)
T ss_pred ---CCcccccccCCCCceEecCChHHHHHHHHHhhhcCe-eeeEecCCCccccCHHHHh
Confidence 667999999999999999999999999999999999 9999999999999998853
No 11
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.96 E-value=1.2e-28 Score=231.40 Aligned_cols=197 Identities=29% Similarity=0.381 Sum_probs=174.4
Q ss_pred cEEEEEcCcccchHHhhHh-hhccHHHHHHHHHHHHH----cCCChHHHhhcCCCccccCccchhhHHHHHHHHHHHHHH
Q 027514 7 LLLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDI----LGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLR 81 (222)
Q Consensus 7 ~~~~~F~GqG~~~~~~~~~-~~~~p~~~~~~~~~~~~----lg~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~a~~~~l~ 81 (222)
+++|+|+|||+||.+|+++ |..+|.|+++++.|+.. +++++.+.+..+....+......|+.+|++|++++++|+
T Consensus 526 ~~vfvf~gqgsq~~~mg~el~~~~p~f~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~~Qp~lfai~~ala~l~~ 605 (1061)
T COG3321 526 KTVFVFPGQGSQWAGMGRELYALEPVFASAFDALEALLHRLLGFSLPEVIFAPDYPFLESIDFAQPALFAVSVALAALWR 605 (1061)
T ss_pred ceEEEeCchHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHcCCcccceecCCCCccccCcchhhhHHHHHHHHHHHHHH
Confidence 5999999999999999999 79999999999999875 377777777655433366677899999999999999999
Q ss_pred HhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCH-HHHHHHHHHhcc
Q 027514 82 ARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDS-DKVQQLCDAANQ 160 (222)
Q Consensus 82 ~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~-~~~~~~l~~~~~ 160 (222)
++ |+ .|+.++|||+||++|++++|+++++++++++..|+++|.... ..|.|++| .++. +.+.+.+...
T Consensus 606 s~--gv----~p~~viGhS~gE~aaA~~aGv~s~~d~~~~v~~Rg~lm~~~~--~~G~m~~v-~~~~~~~~~~~~~~~-- 674 (1061)
T COG3321 606 SW--GV----IPGAVIGHSLGELAAAVAAGVLSLEDALRVVATRGRLMQQLA--GEGAMLAV-ELSLLAEVQELLALG-- 674 (1061)
T ss_pred hc--CC----cCccccCcCHHHHHHHHHhccCChhhhhHhhhhcchhhccCC--CCcchhhh-hcCccchhhHHhhcc--
Confidence 98 99 999999999999999999999999999999999999999953 34899999 5666 7777777643
Q ss_pred cCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEccccCCCCCCCCCCC
Q 027514 161 EVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS 220 (222)
Q Consensus 161 ~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~~~p~Hs~~~~~ 220 (222)
..++.|+.+|+|+++||+|+++.+.++...+...+. ....+++. ++|||+.|++
T Consensus 675 ----~~~v~ia~~n~P~~~vi~g~~~~i~~l~~~~~~~~~-~~~~~~v~-~a~hs~~m~~ 728 (1061)
T COG3321 675 ----RPQVPLAAVNSPQQVVIAGDPEAIAALIARLQAQGV-RARRLAVS-HAFHSPLMDP 728 (1061)
T ss_pred ----ccceeEEEecCCceEEecCCHHHHHHHHHHHhccCc-ccceeeee-eccccHHHHH
Confidence 246999999999999999999999999999999988 88999999 9999998864
No 12
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=95.03 E-value=0.17 Score=38.40 Aligned_cols=48 Identities=27% Similarity=0.398 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~ 123 (222)
.+.++++.+.|.+. |+ .+|.+.|-|.|.+.|+..+...+.++...+..
T Consensus 10 G~~~~Gvl~aL~e~--gi----~~d~v~GtSaGAi~aa~~a~g~~~~~~~~~~~ 57 (172)
T cd07198 10 GIYHVGVAKALRER--GP----LIDIIAGTSAGAIVAALLASGRDLEEALLLLL 57 (172)
T ss_pred HHHHHHHHHHHHHc--CC----CCCEEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 46789999999998 88 89999999999999999988889888777663
No 13
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=95.00 E-value=1.1 Score=33.82 Aligned_cols=114 Identities=22% Similarity=0.235 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCHHH
Q 027514 71 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDK 150 (222)
Q Consensus 71 ~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~~~ 150 (222)
+.++++.+.|.+. |+ .+|.+.|-|.|.+.|+..+...+.++..+........+..... .....-.+ .+.+.
T Consensus 13 ~~~~Gvl~~L~~~--~~----~~d~i~GtSaGal~a~~~a~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~ 83 (175)
T cd07205 13 LAHIGVLKALEEA--GI----PIDIVSGTSAGAIVGALYAAGYSPEEIEERAKLRSTDLKALSD-LTIPTAGL--LRGDK 83 (175)
T ss_pred HHHHHHHHHHHHc--CC----CeeEEEEECHHHHHHHHHHcCCCHHHHHHHHHhhccchhhhhc-cccccccc--cChHH
Confidence 4688999999888 88 8999999999999998888778888877665422211111100 00000011 34566
Q ss_pred HHHHHHHhcccC---CCCCcEEEEEeeCC-CCEEEEcCHHHHHHHHH
Q 027514 151 VQQLCDAANQEV---DEDNKVQIANYLCP-GNYAVSGGVKGIEAVEA 193 (222)
Q Consensus 151 ~~~~l~~~~~~~---~~~~~~~ia~~ns~-~~~visG~~~~l~~l~~ 193 (222)
+++.+++.-... ....++.|...|-. .+.++--..+-.+++..
T Consensus 84 l~~~l~~~~~~~~~~~~~~~l~i~a~~l~~g~~~~f~~~~l~~av~A 130 (175)
T cd07205 84 FLELLDEYFGDRDIEDLWIPFFIVATDLTSGKLVVFRSGSLVRAVRA 130 (175)
T ss_pred HHHHHHHHcCCCcHHHCCCCEEEEEEECCCCCEEEEcCCCHHHHHHH
Confidence 666665443211 11345777777644 33444333333334433
No 14
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=94.08 E-value=2.5 Score=36.49 Aligned_cols=122 Identities=14% Similarity=0.107 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCC
Q 027514 67 PAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGL 146 (222)
Q Consensus 67 ~~i~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~ 146 (222)
-.+....++++..|.+. +..++..++.+.|-|.|.++|++.+...+.+++...+..-..-.... .-|.+.--.+
T Consensus 18 GflG~yHvGV~~~L~e~--~p~ll~~~~~iaGaSAGAL~aa~~a~g~~~~~~~~~i~~ia~~~r~~---~lG~~~p~f~- 91 (405)
T cd07223 18 GYLGLYHVGVTECLRQR--APRLLQGARRIYGSSSGALNAVSIVCGKSADFCCSNLLGMVKHLERL---SLGIFHPAYA- 91 (405)
T ss_pred HHHHHHHHHHHHHHHHh--CchhhccCCeeeeeCHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh---ccCCCCcccc-
Confidence 35567889999999988 43335567889999999999999999999997766665533322221 1121111101
Q ss_pred CHHHHHHHHHHhcccC---CCCCcEEEEEeeCC--CCEEEE---cCHHHHHHHHHH
Q 027514 147 DSDKVQQLCDAANQEV---DEDNKVQIANYLCP--GNYAVS---GGVKGIEAVEAK 194 (222)
Q Consensus 147 ~~~~~~~~l~~~~~~~---~~~~~~~ia~~ns~--~~~vis---G~~~~l~~l~~~ 194 (222)
-.+.+++.++++-.+. -..++++|+..+-+ +.++|| -..+-++++...
T Consensus 92 l~~~lr~~L~~~LP~daHe~~sgrL~ISlT~l~~gknvlvS~F~SredLIqALlAS 147 (405)
T cd07223 92 PIEHIRQQLQESLPPNIHILASQRLGISMTRWPDGRNFIVTDFATRDELIQALICT 147 (405)
T ss_pred HHHHHHHHHHHhCCchhhHHhCCceEEEEEEccCCceEEecCCCCHHHHHHHHHHh
Confidence 1234555555442111 12567888776543 334443 333445555443
No 15
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=93.71 E-value=0.27 Score=37.85 Aligned_cols=48 Identities=25% Similarity=0.249 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~ 123 (222)
-++++++.+.|++. |+ .||.+.|-|.|.+.|+..+-..+.++..++..
T Consensus 11 G~~~~Gvl~~L~e~--~~----~~d~i~GtSaGai~aa~~a~g~~~~~~~~~~~ 58 (194)
T cd07207 11 GIAYIGALKALEEA--GI----LKKRVAGTSAGAITAALLALGYSAADIKDILK 58 (194)
T ss_pred HHHHHHHHHHHHHc--CC----CcceEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 35678889999988 88 89999999999988887777778777666554
No 16
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=93.66 E-value=1.9 Score=37.05 Aligned_cols=54 Identities=17% Similarity=0.281 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHH
Q 027514 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (222)
Q Consensus 68 ~i~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~ 123 (222)
...+.++++++.|.+. ++.++...+.++|-|.|.+.|+..+-..+.++..++..
T Consensus 22 frGiYHvGVl~aL~E~--gp~ll~~~d~IaGtSAGALvAAl~asG~s~de~~r~~~ 75 (382)
T cd07219 22 FLSFYQAGVVDALRDL--APRMLETAHRVAGTSAGSVIAALVVCGISMDEYLRVLN 75 (382)
T ss_pred HHHHHHHHHHHHHHhc--CCcccccCCeEEEEcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 4456799999999987 64334457899999999999888877788888877764
No 17
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=93.41 E-value=3.6 Score=33.40 Aligned_cols=53 Identities=13% Similarity=0.253 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 124 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~ 124 (222)
.+.++++.+.|.+. ++.++..++.+.|-|.|.+.|+..+-..+.++..+....
T Consensus 12 G~yh~GVl~aL~e~--~~~l~~~~~~i~GtSAGAl~aa~~asg~~~~~~~~~~~~ 64 (252)
T cd07221 12 GFYHVGVTRCLSER--APHLLRDARMFFGASAGALHCVTFLSGLPLDQILQILMD 64 (252)
T ss_pred HHHHHHHHHHHHHh--CcchhccCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 45789999999988 663333489999999999998877767777777766543
No 18
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=93.32 E-value=1.8 Score=35.12 Aligned_cols=55 Identities=16% Similarity=0.108 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHH
Q 027514 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 124 (222)
Q Consensus 68 ~i~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~ 124 (222)
...+..+++.+.|.+. |+.++..++.+.|-|.|.+.|++.+-..+.++..+....
T Consensus 14 ~rG~yh~GVl~~L~e~--g~~l~~~~~~i~G~SAGAl~aa~~a~g~~~~~~~~~~~~ 68 (249)
T cd07220 14 FLGVYHVGVASCLLEH--APFLVANARKIYGASAGALTATALVTGVCLGECGASVIR 68 (249)
T ss_pred HHHHHHHHHHHHHHhc--CCcccccCCeEEEEcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3456789999999988 763344489999999999998877766777765555443
No 19
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=93.02 E-value=0.4 Score=38.05 Aligned_cols=117 Identities=15% Similarity=0.032 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhh-ccCCCceEEEcCCCH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAA-DAAKGAMVSIIGLDS 148 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~-~~~~g~m~av~~~~~ 148 (222)
.+.++++.+.|.+. |+ +|+.+.|-|.|.+.|+..+-..+.++..+....... .... ......-..+ .+.
T Consensus 12 G~~~~GvL~aL~e~--gi----~~~~i~GtSaGAi~aa~~a~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~--~~~ 81 (221)
T cd07210 12 FYAHLGFLAALLEM--GL----EPSAISGTSAGALVGGLFASGISPDEMAELLLSLER--KDFWMFWDPPLRGGL--LSG 81 (221)
T ss_pred HHHHHHHHHHHHHc--CC----CceEEEEeCHHHHHHHHHHcCCCHHHHHHHHHhcCH--HHHhhhccccCCccc--cCh
Confidence 46789999999988 88 899999999999998888877888776665432111 1100 0000000111 355
Q ss_pred HHHHHHHHHhcccCC---CCCcEEEEEeeC-CCCEEEEcCHHHHHHHHHHHH
Q 027514 149 DKVQQLCDAANQEVD---EDNKVQIANYLC-PGNYAVSGGVKGIEAVEAKAK 196 (222)
Q Consensus 149 ~~~~~~l~~~~~~~~---~~~~~~ia~~ns-~~~~visG~~~~l~~l~~~l~ 196 (222)
+.+++.+++.-.... ...++.|...|- ..+.++-...+-.+++.+.+.
T Consensus 82 ~~l~~~l~~~l~~~~~~~~~~~l~i~atdl~tg~~~~f~~~~l~~av~AS~a 133 (221)
T cd07210 82 DRFAALLREHLPPDRFEELRIPLAVSVVDLTSRETLLLSEGDLAEAVAASCA 133 (221)
T ss_pred HHHHHHHHHHcCCCCHHHCCCCeEEEEEECCCCCEEEECCCCHHHHHHHHcc
Confidence 677777776432111 134577777663 334444444444444444433
No 20
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=92.99 E-value=0.34 Score=38.26 Aligned_cols=39 Identities=21% Similarity=0.258 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCC
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFS 114 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~ 114 (222)
.+.++++++.|.+. |+ .+|.+.|.|.|.+.|+..+...+
T Consensus 10 G~~~~Gvl~aL~e~--g~----~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 10 GAYQAGVLKALAEA--GI----EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHHHHHHc--CC----CCCEEEEECHHHHHHHHHHcCCc
Confidence 46789999999998 88 89999999999998887777776
No 21
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=92.86 E-value=0.38 Score=40.15 Aligned_cols=48 Identities=19% Similarity=0.259 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~ 123 (222)
-+.++++.+.|.+. |+ .|+++.|-|.|.+.++..|...+.++....+.
T Consensus 23 G~~hiGVl~aL~e~--gi----~~~~iaGtS~GAiva~l~A~g~~~~~~~~~~~ 70 (306)
T COG1752 23 GAAHIGVLKALEEA--GI----PIDVIAGTSAGAIVAALYAAGMDEDELELAAQ 70 (306)
T ss_pred HHHHHHHHHHHHHc--CC----CccEEEecCHHHHHHHHHHcCCChhHHHHHHH
Confidence 46788999999998 88 99999999999998887777766655444433
No 22
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=92.62 E-value=0.46 Score=38.96 Aligned_cols=45 Identities=16% Similarity=0.276 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLK 120 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~ 120 (222)
-++++++.+.|.+. || .+|++.|-|.|.+.++..+...+.++...
T Consensus 22 G~ahiGVL~aLeE~--gi----~~d~v~GtSaGAiiga~ya~g~~~~~~~~ 66 (269)
T cd07227 22 GISHIGILQALEEA--GI----PIDAIGGTSIGSFVGGLYAREADLVPIFG 66 (269)
T ss_pred HHHHHHHHHHHHHc--CC----CccEEEEECHHHHHHHHHHcCCchHHHHH
Confidence 35788899999988 99 89999999999887766665566665443
No 23
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=92.62 E-value=4.6 Score=32.59 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHH
Q 027514 69 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (222)
Q Consensus 69 i~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~ 123 (222)
..+.++++.+.|++. |+. ..++.+.|-|.|.+.|++.+-.++.++..+...
T Consensus 11 rG~yh~GVl~aL~e~--g~~--~~~d~i~GtSAGAl~aa~~a~g~~~~~~~~~~~ 61 (245)
T cd07218 11 LGIYHVGVAVCLKKY--APH--LLLNKISGASAGALAACCLLCDLPLGEMTSDFL 61 (245)
T ss_pred HHHHHHHHHHHHHHh--Ccc--cCCCeEEEEcHHHHHHHHHHhCCcHHHHHHHHH
Confidence 456789999999998 630 057889999999999998887788777665544
No 24
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=92.43 E-value=4.9 Score=32.37 Aligned_cols=53 Identities=15% Similarity=0.228 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 124 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~ 124 (222)
.+.++++.+.|.+. |+.+...++.+.|-|.|.+.|++.+-..+.++..+....
T Consensus 11 G~yh~GVl~~L~e~--g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~~~~~~~~ 63 (243)
T cd07204 11 GIYHVGVASALREH--APRLLQNARRIAGASAGAIVAAVVLCGVSMEEACSFILK 63 (243)
T ss_pred HHHHHHHHHHHHHc--CcccccCCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 45789999999998 762222246999999999998888777888876655443
No 25
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=92.41 E-value=0.49 Score=35.96 Aligned_cols=45 Identities=16% Similarity=0.177 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLK 120 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~ 120 (222)
-+.++++.+.|++. |+ .||.+.|-|.|.+.|+..+...+.++...
T Consensus 12 G~~~~Gvl~~L~e~--g~----~~d~i~GtSaGAi~aa~~a~g~~~~~~~~ 56 (175)
T cd07228 12 GWAHIGVLRALEEE--GI----EIDIIAGSSIGALVGALYAAGHLDALEEW 56 (175)
T ss_pred HHHHHHHHHHHHHC--CC----CeeEEEEeCHHHHHHHHHHcCCCHHHHHH
Confidence 35688899999988 88 89999999999998877766666655433
No 26
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=92.35 E-value=5 Score=32.36 Aligned_cols=40 Identities=23% Similarity=0.299 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
.+.+++..+.|.+. |+.+..+++.+.|-|.|.+.|++.+.
T Consensus 11 G~yhiGVl~~L~e~--g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 11 GIYHLGAAKALLRH--GKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHHHHHHc--CchhhccCCEEEEECHHHHHHHHHhc
Confidence 45789999999998 77333347999999999999988874
No 27
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=92.01 E-value=0.61 Score=38.98 Aligned_cols=47 Identities=17% Similarity=0.272 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 122 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~ 122 (222)
-++++++.+.|.+. |+ .||.++|-|.|.+.++..+...+.++..+..
T Consensus 27 G~ahiGvL~aLee~--gi----~~d~v~GtSaGAi~ga~ya~g~~~~~~~~~~ 73 (306)
T cd07225 27 GCAHIGVIKALEEA--GI----PVDMVGGTSIGAFIGALYAEERNISRMKQRA 73 (306)
T ss_pred HHHHHHHHHHHHHc--CC----CCCEEEEECHHHHHHHHHHcCCCHHHHHHHH
Confidence 46788999999998 99 8999999999987766555556665554444
No 28
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=91.63 E-value=1.4 Score=35.27 Aligned_cols=54 Identities=24% Similarity=0.290 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHH
Q 027514 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLR 125 (222)
Q Consensus 68 ~i~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r 125 (222)
...+..+++.+.|.+. |+ .++.+.+.|-|.|.+.|+..+-..+.++..++....
T Consensus 9 ~lg~yh~GVl~~L~e~--gi--~~~~~~i~G~SAGAl~aa~~asg~~~~~~~~~~~~~ 62 (233)
T cd07224 9 LLFPYHLGVLSLLIEA--GV--INETTPLAGASAGSLAAACSASGLSPEEALEATEEL 62 (233)
T ss_pred HHHHHHHHHHHHHHHc--CC--CCCCCEEEEEcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4567889999999998 88 112568999999999988887778888777765543
No 29
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=91.33 E-value=0.75 Score=39.72 Aligned_cols=49 Identities=20% Similarity=0.221 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHH
Q 027514 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (222)
Q Consensus 68 ~i~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~ 123 (222)
..-.+.+++.+.|.+. |+ .|+.+.|-|.|.+.|+..+. .+.+|..++..
T Consensus 93 ~~G~~h~Gv~kaL~e~--gl----~p~~i~GtS~Gaivaa~~a~-~~~~e~~~~l~ 141 (391)
T cd07229 93 IFGLCHLGVVKALWLR--GL----LPRIITGTATGALIAALVGV-HTDEELLRFLD 141 (391)
T ss_pred HHHHHHHHHHHHHHHc--CC----CCceEEEecHHHHHHHHHHc-CCHHHHHHHHh
Confidence 3457789999999998 99 99999999999999888887 57788777765
No 30
>PRK10279 hypothetical protein; Provisional
Probab=90.13 E-value=0.56 Score=39.12 Aligned_cols=37 Identities=16% Similarity=0.301 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHH-HHHhcc
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTA-LAFAGA 112 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A-~~~aG~ 112 (222)
-++++++.+.|.+. |+ .||.+.|-|.|.+.+ +|++|.
T Consensus 17 G~ahiGVL~aL~E~--gi----~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 17 GWSHIGVINALKKV--GI----EIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHHHHHHc--CC----CcCEEEEEcHHHHHHHHHHcCC
Confidence 35688999999998 99 999999999998776 566665
No 31
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=88.53 E-value=2 Score=36.01 Aligned_cols=77 Identities=17% Similarity=0.161 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCceEEEcCCCHHHH
Q 027514 72 TSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKV 151 (222)
Q Consensus 72 ~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~~~~~~~~~~~g~m~av~~~~~~~~ 151 (222)
+.+.+.+.+++.. |..+.+.+|.+.|-|.|-+.|+..+-.++.+|..++....+. ...... ...+.+.+
T Consensus 13 ~~i~vL~~le~~~-g~~i~~~fD~i~GTStGgiIA~~la~g~s~~e~~~~y~~~~~---~iF~~~-------~~y~~~~l 81 (312)
T cd07212 13 VLIQMLIAIEKAL-GRPIRELFDWIAGTSTGGILALALLHGKSLREARRLYLRMKD---RVFDGS-------RPYNSEPL 81 (312)
T ss_pred HHHHHHHHHHHHh-CCCchhhccEEEeeChHHHHHHHHHcCCCHHHHHHHHHHhhh---hhCCCC-------CCCCChHH
Confidence 4556667777643 553334479999999999888888778999998887544332 111111 12355667
Q ss_pred HHHHHHhc
Q 027514 152 QQLCDAAN 159 (222)
Q Consensus 152 ~~~l~~~~ 159 (222)
++++++.-
T Consensus 82 e~~L~~~~ 89 (312)
T cd07212 82 EEFLKREF 89 (312)
T ss_pred HHHHHHHH
Confidence 77776654
No 32
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=88.29 E-value=2.1 Score=35.89 Aligned_cols=48 Identities=19% Similarity=0.103 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHH
Q 027514 68 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 122 (222)
Q Consensus 68 ~i~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~ 122 (222)
...++.+++.+.|.+. |+ .|+.+.|-|.|.+.|+..+. .+.+|..++.
T Consensus 78 ~~g~~h~GVlkaL~e~--gl----~p~~i~GsSaGAivaa~~~~-~t~~El~~~~ 125 (323)
T cd07231 78 ALGTFHVGVVRTLVEH--QL----LPRVIAGSSVGSIVCAIIAT-RTDEELQSFF 125 (323)
T ss_pred HHHHHHHHHHHHHHHc--CC----CCCEEEEECHHHHHHHHHHc-CCHHHHHHHH
Confidence 3347789999999998 88 89999999999988887765 5667766665
No 33
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=88.07 E-value=2 Score=35.70 Aligned_cols=37 Identities=22% Similarity=0.183 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 69 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 69 i~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
..+.++++++.|.+. |+ .|+.+.|-|.|.+.|+..+.
T Consensus 80 ~g~~h~Gvl~aL~e~--~l----~~~~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 80 LGLFHLGVVKALWEQ--DL----LPRVISGSSAGAIVAALLGT 116 (298)
T ss_pred HHHHHHHHHHHHHHc--CC----CCCEEEEEcHHHHHHHHHHc
Confidence 356789999999888 88 89999999999988776653
No 34
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=87.64 E-value=2.2 Score=36.15 Aligned_cols=100 Identities=16% Similarity=0.081 Sum_probs=52.4
Q ss_pred CCcEEEEEcCcccchHHhhHhhhccHHHHHHHHHHHHHcCCChHHHhhcCCCcc-ccCccchhh-----HHHHHHHHHHH
Q 027514 5 RSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEK-LDSTIISQP-----AIYVTSLAAVE 78 (222)
Q Consensus 5 ~~~~~~~F~GqG~~~~~~~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~-~~~~~~~~~-----~i~~~~~a~~~ 78 (222)
++++++.++|-|.++....+.+...|.+++-+. +=++.-..... +++..+. ..-..++.. ++..=..++..
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~--s~~le~Pyyg~-RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~ 167 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIA--SLILENPYYGQ-RKPKDQRRSSLRNVSDLFVMGRATILESRALLH 167 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcc--eEEEecccccc-cChhHhhcccccchhHHHHHHhHHHHHHHHHHH
Confidence 467889999999987666555544455444211 11111111100 1111110 000111111 11222455666
Q ss_pred HHHHhcCCCCcccCccEEeeccHHHHHHHHHhccC
Q 027514 79 LLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAF 113 (222)
Q Consensus 79 ~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~ 113 (222)
.++++ |. .|-.+.|.|+|-.-|+.++..+
T Consensus 168 Wl~~~--G~----~~~g~~G~SmGG~~A~laa~~~ 196 (348)
T PF09752_consen 168 WLERE--GY----GPLGLTGISMGGHMAALAASNW 196 (348)
T ss_pred HHHhc--CC----CceEEEEechhHhhHHhhhhcC
Confidence 77777 87 8899999999987777655544
No 35
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=87.02 E-value=2 Score=37.57 Aligned_cols=46 Identities=15% Similarity=0.108 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 122 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~ 122 (222)
-++.+++.+.|.+. |+ .|+.+.|-|.|.+.|+..+. -+.++..++.
T Consensus 85 G~~hiGVLkaL~E~--gl----~p~vIsGTSaGAivAal~as-~~~eel~~~l 130 (421)
T cd07230 85 GMFHIGVLKALFEA--NL----LPRIISGSSAGSIVAAILCT-HTDEEIPELL 130 (421)
T ss_pred HHHHHHHHHHHHHc--CC----CCCEEEEECHHHHHHHHHHc-CCHHHHHHHH
Confidence 45788999999888 88 89999999999988876655 5666655543
No 36
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=86.25 E-value=2.6 Score=34.82 Aligned_cols=53 Identities=26% Similarity=0.317 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHHHH
Q 027514 71 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLR 125 (222)
Q Consensus 71 ~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r 125 (222)
+++.++.+.|.+. +..+.+.+|.++|-|.|-+.|+..+-..+.++..++....
T Consensus 15 i~~~~vL~~Le~~--~~~~~~~fD~i~GTSaGaiia~~la~g~~~~e~~~~~~~~ 67 (288)
T cd07213 15 IVQLVLLKRLAEE--FPSFLDQIDLFAGTSAGSLIALGLALGYSPRQVLKLYEEV 67 (288)
T ss_pred HHHHHHHHHHHHh--CcccccceeEEEEeCHHHHHHHHHHcCcCHHHHHHHHHHh
Confidence 5567777777777 4322446899999999999988888777888887776543
No 37
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=85.92 E-value=2.5 Score=36.84 Aligned_cols=47 Identities=19% Similarity=0.085 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 123 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~ 123 (222)
-++.+++.+.|.+. |+ .|+.+.|-|.|.+.|+..+. -+.++..++..
T Consensus 79 G~~h~GVlkaL~e~--gl----lp~iI~GtSAGAivaalla~-~t~~el~~~~~ 125 (407)
T cd07232 79 AYYHFGVVKALLDA--DL----LPNVISGTSGGSLVAALLCT-RTDEELKQLLV 125 (407)
T ss_pred HHHHHHHHHHHHhC--CC----CCCEEEEECHHHHHHHHHHc-CCHHHHHHHHh
Confidence 35688999999998 88 89999999999988877765 56666655543
No 38
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=85.29 E-value=1.6 Score=35.42 Aligned_cols=38 Identities=18% Similarity=0.327 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhcCCCCcccC-ccEEeeccHHHHHHHH-HhccCC
Q 027514 71 VTSLAAVELLRARDGGQQIIDS-VDVTCGLSLGEYTALA-FAGAFS 114 (222)
Q Consensus 71 ~~~~a~~~~l~~~~~gi~~~~~-p~~~~G~S~Ge~~A~~-~aG~~~ 114 (222)
+.+.++.+.|.+. |+ . +|.+.|-|.|.+.|+. ++|...
T Consensus 11 ~~~~Gvl~al~e~--~~----~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 11 AYTAGVLDAFLEA--GI----RPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHHHHHHc--CC----CCCCEEEEECHHHHhHHHHHhCCcc
Confidence 5788999999988 88 7 9999999999887665 566543
No 39
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=83.68 E-value=5.6 Score=33.13 Aligned_cols=55 Identities=24% Similarity=0.407 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHh-ccCCHHHHHHHHHHHH
Q 027514 71 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA-GAFSFEDGLKLVKLRG 126 (222)
Q Consensus 71 ~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a-G~~~~~~a~~~~~~r~ 126 (222)
++++.+.+.|.+.. +..+.+..|.+.|-|.|-+.|+..+ +.++.++..++....+
T Consensus 21 ~~~~~vL~~Le~~~-~~~i~~~fDli~GTStGgiiA~~la~~~~~~~e~~~~y~~~~ 76 (308)
T cd07211 21 VVALEILRKIEKLT-GKPIHELFDYICGVSTGAILAFLLGLKKMSLDECEELYRKLG 76 (308)
T ss_pred HHHHHHHHHHHHHh-CCCchhhcCEEEecChhHHHHHHHhcccccHHHHHHHHHHHH
Confidence 45677777776653 4322234699999999998888776 4689999888766544
No 40
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=81.89 E-value=2.1 Score=33.66 Aligned_cols=31 Identities=23% Similarity=0.125 Sum_probs=24.3
Q ss_pred HHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccC
Q 027514 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAF 113 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~ 113 (222)
.+++.+. ++ ++-.++|||+|-..|+.++...
T Consensus 57 ~~~l~~~--~~----~~~~lvG~S~Gg~va~~~a~~~ 87 (242)
T PRK11126 57 SQTLQSY--NI----LPYWLVGYSLGGRIAMYYACQG 87 (242)
T ss_pred HHHHHHc--CC----CCeEEEEECHHHHHHHHHHHhC
Confidence 3455555 77 8889999999999988877665
No 41
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.57 E-value=3.4 Score=33.24 Aligned_cols=21 Identities=29% Similarity=0.351 Sum_probs=15.6
Q ss_pred ccCccEEeeccHHHHHHHHHh
Q 027514 90 IDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 90 ~~~p~~~~G~S~Ge~~A~~~a 110 (222)
.++|-+++|||+|-+-|.-+|
T Consensus 72 ~d~P~alfGHSmGa~lAfEvA 92 (244)
T COG3208 72 LDAPFALFGHSMGAMLAFEVA 92 (244)
T ss_pred CCCCeeecccchhHHHHHHHH
Confidence 447889999999976665433
No 42
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=79.05 E-value=9.9 Score=30.70 Aligned_cols=56 Identities=29% Similarity=0.346 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhcCCCC--cccCccEEeeccHHHHHHHHHhcc-CCHHHHHHHHHHHHH
Q 027514 71 VTSLAAVELLRARDGGQQ--IIDSVDVTCGLSLGEYTALAFAGA-FSFEDGLKLVKLRGA 127 (222)
Q Consensus 71 ~~~~a~~~~l~~~~~gi~--~~~~p~~~~G~S~Ge~~A~~~aG~-~~~~~a~~~~~~r~~ 127 (222)
++++.+.+.+.+.. +.. +.+..|.++|-|.|-+.|+..+.. ++.++..++....+.
T Consensus 12 ~~~~~~L~~le~~~-~~~~~~~~~fd~i~GtS~G~iia~~l~~~~~~~~~~~~~~~~~~~ 70 (258)
T cd07199 12 IIPAEILAELEKRL-GKPSRIADLFDLIAGTSTGGIIALGLALGRYSAEELVELYEELGR 70 (258)
T ss_pred HHHHHHHHHHHHHh-CCCCchhhccceeeeccHHHHHHHHHhcCCCCHHHHHHHHHHHhH
Confidence 44556666666553 321 233479999999999888877666 999999988765543
No 43
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=78.31 E-value=9.4 Score=29.30 Aligned_cols=21 Identities=43% Similarity=0.607 Sum_probs=16.8
Q ss_pred CccEEeeccHHHHHHHHHhcc
Q 027514 92 SVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
++-.++|||+|-+.++.++..
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred CceEEEEeCchHHHHHHHHHH
Confidence 566899999999888766654
No 44
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=77.87 E-value=14 Score=28.24 Aligned_cols=21 Identities=29% Similarity=0.237 Sum_probs=16.6
Q ss_pred CccEEeeccHHHHHHHHHhcc
Q 027514 92 SVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
++-.++|||+|-..|+.++..
T Consensus 70 ~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 70 EPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CeEEEEEeccHHHHHHHHHHh
Confidence 677899999998887766543
No 45
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=74.80 E-value=3.6 Score=32.76 Aligned_cols=29 Identities=38% Similarity=0.294 Sum_probs=21.5
Q ss_pred HHHHHhcCCCCcccCccEEeeccHHHHHHHHHhcc
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
.++.+. ++ ++..++|||+|-..++.++..
T Consensus 87 ~~i~~~--~~----~~~~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 87 ALCAAE--GL----SPDGVIGHSAGAAIALRLALD 115 (278)
T ss_pred HHHHHc--CC----CCceEEEECccHHHHHHHHHh
Confidence 345555 66 788999999999888766543
No 46
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=74.59 E-value=4.5 Score=32.69 Aligned_cols=29 Identities=24% Similarity=0.171 Sum_probs=21.9
Q ss_pred HHHHHhcCCCCcccCccEEeeccHHHHHHHHHhcc
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
.++... ++ ++-.++|||+|-+.|+.++..
T Consensus 83 ~~i~~l--~~----~~~~LvG~S~GG~va~~~a~~ 111 (276)
T TIGR02240 83 RMLDYL--DY----GQVNAIGVSWGGALAQQFAHD 111 (276)
T ss_pred HHHHHh--Cc----CceEEEEECHHHHHHHHHHHH
Confidence 345555 66 778899999999988877743
No 47
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=74.42 E-value=4.5 Score=32.99 Aligned_cols=31 Identities=13% Similarity=-0.051 Sum_probs=22.3
Q ss_pred HHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 75 AAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 75 a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
.+..++.+. ++ ++..++|||+|-..|+..+-
T Consensus 91 ~l~~~l~~l--~~----~~~~lvGhS~Gg~va~~~a~ 121 (294)
T PLN02824 91 QLNDFCSDV--VG----DPAFVICNSVGGVVGLQAAV 121 (294)
T ss_pred HHHHHHHHh--cC----CCeEEEEeCHHHHHHHHHHH
Confidence 334455566 66 78899999999888875554
No 48
>PRK13604 luxD acyl transferase; Provisional
Probab=72.96 E-value=5.4 Score=33.40 Aligned_cols=32 Identities=22% Similarity=0.158 Sum_probs=22.7
Q ss_pred HHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhcc
Q 027514 75 AAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 75 a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
+..+.+++. +. .+-.++|||+|-.+|..+|..
T Consensus 97 aaid~lk~~--~~----~~I~LiG~SmGgava~~~A~~ 128 (307)
T PRK13604 97 TVVDWLNTR--GI----NNLGLIAASLSARIAYEVINE 128 (307)
T ss_pred HHHHHHHhc--CC----CceEEEEECHHHHHHHHHhcC
Confidence 334555655 44 667899999999998776653
No 49
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=72.66 E-value=6.1 Score=29.74 Aligned_cols=29 Identities=38% Similarity=0.449 Sum_probs=22.0
Q ss_pred HHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
.+++++. +. ++-.++|||+|-..++.++.
T Consensus 57 ~~~l~~~--~~----~~~~lvG~S~Gg~~a~~~a~ 85 (228)
T PF12697_consen 57 AELLDAL--GI----KKVILVGHSMGGMIALRLAA 85 (228)
T ss_dssp HHHHHHT--TT----SSEEEEEETHHHHHHHHHHH
T ss_pred hhccccc--cc----cccccccccccccccccccc
Confidence 3456666 66 78899999999988876654
No 50
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=72.47 E-value=16 Score=31.17 Aligned_cols=82 Identities=20% Similarity=0.167 Sum_probs=48.7
Q ss_pred CccEEeeccHHHHHHHHHhccCCHHHHHHHHHHHHH-HHHHhhccCCCceEE-E-cCCCHHHHHHHHHHhcccCCC----
Q 027514 92 SVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGA-AMQEAADAAKGAMVS-I-IGLDSDKVQQLCDAANQEVDE---- 164 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~r~~-~~~~~~~~~~g~m~a-v-~~~~~~~~~~~l~~~~~~~~~---- 164 (222)
..|.+.|-|.|-+.|+..+-.++.++..++....+. ++..... ..+.... + ...+.+.+++++++.-.+..-
T Consensus 41 ~FDlIaGTStGgIIAa~la~g~s~~ei~~~y~~~~~~iF~~~~~-~~~l~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~ 119 (344)
T cd07217 41 YFDFVGGTSTGSIIAACIALGMSVTDLLSFYTLNGVNMFDKAWL-AQRLFLNKLYNQYDPTNLGKKLNTVFPETTLGDDT 119 (344)
T ss_pred cccEEEEecHHHHHHHHHHcCCCHHHHHHHHHhhhhhhcCchhh-hhhccccccccccCcHHHHHHHHHHcCceeecccc
Confidence 468999999999999988888999999888765543 2221100 0000000 0 014667788888776432211
Q ss_pred -CCcEEEEEee
Q 027514 165 -DNKVQIANYL 174 (222)
Q Consensus 165 -~~~~~ia~~n 174 (222)
...+.|..+|
T Consensus 120 ~~~~l~i~a~d 130 (344)
T cd07217 120 LRTLLMIVTRN 130 (344)
T ss_pred cCceEEEEEEe
Confidence 1235566665
No 51
>PRK11071 esterase YqiA; Provisional
Probab=70.57 E-value=6.8 Score=30.09 Aligned_cols=30 Identities=30% Similarity=0.313 Sum_probs=22.8
Q ss_pred HHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCC
Q 027514 79 LLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFS 114 (222)
Q Consensus 79 ~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~ 114 (222)
++.+. ++ ++-.++|||+|-+.|+..+....
T Consensus 54 l~~~~--~~----~~~~lvG~S~Gg~~a~~~a~~~~ 83 (190)
T PRK11071 54 LVLEH--GG----DPLGLVGSSLGGYYATWLSQCFM 83 (190)
T ss_pred HHHHc--CC----CCeEEEEECHHHHHHHHHHHHcC
Confidence 44444 66 77899999999999998876543
No 52
>PRK03592 haloalkane dehalogenase; Provisional
Probab=70.46 E-value=6.4 Score=32.09 Aligned_cols=29 Identities=21% Similarity=0.193 Sum_probs=22.6
Q ss_pred HHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
..++.+. ++ ++..++|||+|-..|+..+.
T Consensus 84 ~~ll~~l--~~----~~~~lvGhS~Gg~ia~~~a~ 112 (295)
T PRK03592 84 DAWFDAL--GL----DDVVLVGHDWGSALGFDWAA 112 (295)
T ss_pred HHHHHHh--CC----CCeEEEEECHHHHHHHHHHH
Confidence 4456666 77 88899999999988886665
No 53
>PRK00870 haloalkane dehalogenase; Provisional
Probab=70.01 E-value=6.4 Score=32.28 Aligned_cols=28 Identities=11% Similarity=0.004 Sum_probs=20.7
Q ss_pred HHHHHHhcCCCCcccCccEEeeccHHHHHHHHHh
Q 027514 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (222)
..++.+. ++ ++-.++|||+|-+.|...+
T Consensus 106 ~~~l~~l--~~----~~v~lvGhS~Gg~ia~~~a 133 (302)
T PRK00870 106 RSWFEQL--DL----TDVTLVCQDWGGLIGLRLA 133 (302)
T ss_pred HHHHHHc--CC----CCEEEEEEChHHHHHHHHH
Confidence 3455665 66 7778999999987777555
No 54
>PF03958 Secretin_N: Bacterial type II/III secretion system short domain; InterPro: IPR005644 This is a group of NolW-like proteins, which are closely related to bacterial type II and III secretion system protein (IPR004846 from INTERPRO).; PDB: 3EZJ_C 2Y3M_A 3OSS_D.
Probab=68.96 E-value=25 Score=22.55 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=28.7
Q ss_pred CcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcC
Q 027514 166 NKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFK 199 (222)
Q Consensus 166 ~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~ 199 (222)
..+.|......+..+|.|+++.++.+.+.+++.+
T Consensus 44 ~~~~i~~d~~tNsliv~g~~~~~~~i~~li~~LD 77 (82)
T PF03958_consen 44 SSGRIVADERTNSLIVRGTPEDLEQIRELIKQLD 77 (82)
T ss_dssp TTTEEEEECTTTEEEEEEEHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCEEEEEeCHHHHHHHHHHHHHHC
Confidence 4578888888899999999999999988887654
No 55
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=68.58 E-value=8.6 Score=31.46 Aligned_cols=29 Identities=31% Similarity=0.337 Sum_probs=22.3
Q ss_pred HHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
.+.+++. ++ .+-.++|||+|-..|+.++.
T Consensus 90 i~~L~~~--~~----~~v~LvG~SmGG~vAl~~A~ 118 (266)
T TIGR03101 90 YRWLIEQ--GH----PPVTLWGLRLGALLALDAAN 118 (266)
T ss_pred HHHHHhc--CC----CCEEEEEECHHHHHHHHHHH
Confidence 4566665 66 78899999999988886653
No 56
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=66.63 E-value=15 Score=27.22 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHh
Q 027514 71 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 71 ~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (222)
+.++++.+.|.+. ++ .+.++.+.|.|.|.+.++..+
T Consensus 11 ~~~~gvl~~l~~~--~~--~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 11 MYHAGVLSALAER--GL--LDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHHHHh--CC--ccCCCEEEEEcHHHHHHHHHh
Confidence 4788888988887 55 247899999999999988887
No 57
>PLN02965 Probable pheophorbidase
Probab=66.28 E-value=7.1 Score=31.11 Aligned_cols=19 Identities=16% Similarity=0.095 Sum_probs=15.1
Q ss_pred CccEEeeccHHHHHHHHHh
Q 027514 92 SVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (222)
++-.++|||+|-..++.++
T Consensus 72 ~~~~lvGhSmGG~ia~~~a 90 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEAL 90 (255)
T ss_pred CCEEEEecCcchHHHHHHH
Confidence 3789999999988766554
No 58
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=65.88 E-value=8.7 Score=32.33 Aligned_cols=29 Identities=34% Similarity=0.374 Sum_probs=20.8
Q ss_pred HHHHHHhcCCCCcccCcc-EEeeccHHHHHHHHHhc
Q 027514 77 VELLRARDGGQQIIDSVD-VTCGLSLGEYTALAFAG 111 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~-~~~G~S~Ge~~A~~~aG 111 (222)
..++.+. |+ +.. .++|||+|-+.|+..+.
T Consensus 128 ~~ll~~l--~l----~~~~~lvG~SmGG~vA~~~A~ 157 (343)
T PRK08775 128 ALLLDAL--GI----ARLHAFVGYSYGALVGLQFAS 157 (343)
T ss_pred HHHHHHc--CC----CcceEEEEECHHHHHHHHHHH
Confidence 3555665 66 554 69999999888876654
No 59
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=64.68 E-value=9.2 Score=30.22 Aligned_cols=21 Identities=24% Similarity=0.072 Sum_probs=17.4
Q ss_pred CccEEeeccHHHHHHHHHhcc
Q 027514 92 SVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
++-.++|||+|-+.|+.++..
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALK 116 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHh
Confidence 667999999999988877643
No 60
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=64.40 E-value=9.5 Score=32.42 Aligned_cols=26 Identities=23% Similarity=0.310 Sum_probs=19.2
Q ss_pred HHHHHHhcCCCCcccCccEEeeccHHHHHHHH
Q 027514 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALA 108 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~ 108 (222)
.+++.+. ++ ++-.++|||+|-+.|+.
T Consensus 146 ~~~l~~l--~~----~~~~lvGhS~Gg~ia~~ 171 (360)
T PLN02679 146 LDFLEEV--VQ----KPTVLIGNSVGSLACVI 171 (360)
T ss_pred HHHHHHh--cC----CCeEEEEECHHHHHHHH
Confidence 3455665 66 78899999999877653
No 61
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=64.25 E-value=6.8 Score=29.72 Aligned_cols=20 Identities=35% Similarity=0.401 Sum_probs=15.5
Q ss_pred cCccEEeeccHHHHHHHHHh
Q 027514 91 DSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 91 ~~p~~~~G~S~Ge~~A~~~a 110 (222)
+++.+++|||+|-++++-.+
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l 73 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWL 73 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHH
T ss_pred CCCeEEEEeCHHHHHHHHHH
Confidence 36779999999987776543
No 62
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=62.95 E-value=13 Score=28.32 Aligned_cols=22 Identities=32% Similarity=0.368 Sum_probs=16.9
Q ss_pred CCCcccCccEEeeccHHHHHHHHHhc
Q 027514 86 GQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 86 gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
|+ +.-.++|||+|-..++..+.
T Consensus 42 ~~----~~~~~vG~S~Gg~~~~~~a~ 63 (230)
T PF00561_consen 42 GI----KKINLVGHSMGGMLALEYAA 63 (230)
T ss_dssp TT----SSEEEEEETHHHHHHHHHHH
T ss_pred CC----CCeEEEEECCChHHHHHHHH
Confidence 77 66789999999877765543
No 63
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=62.77 E-value=9.3 Score=30.65 Aligned_cols=28 Identities=36% Similarity=0.297 Sum_probs=20.9
Q ss_pred HHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
.++... ++ ++-.++|||+|-+.++..+.
T Consensus 93 ~~l~~l--~~----~~~~lvG~S~Gg~ia~~~a~ 120 (282)
T TIGR03343 93 GLMDAL--DI----EKAHLVGNSMGGATALNFAL 120 (282)
T ss_pred HHHHHc--CC----CCeeEEEECchHHHHHHHHH
Confidence 455555 66 77799999999888776554
No 64
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=62.76 E-value=11 Score=31.87 Aligned_cols=29 Identities=31% Similarity=0.279 Sum_probs=21.1
Q ss_pred HHHHHHhcCCCCcccCc-cEEeeccHHHHHHHHHhc
Q 027514 77 VELLRARDGGQQIIDSV-DVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p-~~~~G~S~Ge~~A~~~aG 111 (222)
..++.+. |+ ++ -.++|||+|-+.|+..+.
T Consensus 117 ~~~~~~l--~~----~~~~~l~G~S~Gg~ia~~~a~ 146 (351)
T TIGR01392 117 KLLLDHL--GI----EQIAAVVGGSMGGMQALEWAI 146 (351)
T ss_pred HHHHHHc--CC----CCceEEEEECHHHHHHHHHHH
Confidence 3455666 77 65 789999999888776543
No 65
>PRK10349 carboxylesterase BioH; Provisional
Probab=62.19 E-value=12 Score=29.70 Aligned_cols=20 Identities=30% Similarity=0.229 Sum_probs=16.2
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
++-.++|||+|-+.|+..+.
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~ 93 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIAL 93 (256)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 66688999999998886653
No 66
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=61.82 E-value=7.3 Score=27.81 Aligned_cols=17 Identities=41% Similarity=0.216 Sum_probs=12.7
Q ss_pred cEEeeccHHHHHHHHHh
Q 027514 94 DVTCGLSLGEYTALAFA 110 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~~a 110 (222)
-.+.|||+|--.|..++
T Consensus 66 i~itGHSLGGalA~l~a 82 (140)
T PF01764_consen 66 IVITGHSLGGALASLAA 82 (140)
T ss_dssp EEEEEETHHHHHHHHHH
T ss_pred chhhccchHHHHHHHHH
Confidence 47899999976665554
No 67
>PLN02578 hydrolase
Probab=61.57 E-value=11 Score=31.84 Aligned_cols=28 Identities=32% Similarity=0.396 Sum_probs=20.6
Q ss_pred HHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
+.+++. +. +|..++|||+|-+.|+.++.
T Consensus 144 ~~i~~~--~~----~~~~lvG~S~Gg~ia~~~A~ 171 (354)
T PLN02578 144 DFVKEV--VK----EPAVLVGNSLGGFTALSTAV 171 (354)
T ss_pred HHHHHh--cc----CCeEEEEECHHHHHHHHHHH
Confidence 445555 44 78899999999988776553
No 68
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=60.54 E-value=35 Score=28.43 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=29.1
Q ss_pred ccEEeeccHHHHHHHHHhc-cCCHHHHHHHHHHHHH
Q 027514 93 VDVTCGLSLGEYTALAFAG-AFSFEDGLKLVKLRGA 127 (222)
Q Consensus 93 p~~~~G~S~Ge~~A~~~aG-~~~~~~a~~~~~~r~~ 127 (222)
.|.++|-|.|-+.|+..+. .++.+|++++-...+.
T Consensus 43 fDli~GTStGgiiA~~l~~~~~t~~e~~~~y~~~~~ 78 (309)
T cd07216 43 FDLIGGTSTGGLIAIMLGRLRMTVDECIDAYTRLAK 78 (309)
T ss_pred cCeeeeccHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 5899999999999988874 6899999887766554
No 69
>PRK10673 acyl-CoA esterase; Provisional
Probab=59.84 E-value=14 Score=29.08 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=16.8
Q ss_pred CccEEeeccHHHHHHHHHhcc
Q 027514 92 SVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
++-.++|||+|-..|+.++..
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTAL 101 (255)
T ss_pred CceEEEEECHHHHHHHHHHHh
Confidence 666899999999888866643
No 70
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=59.79 E-value=11 Score=29.95 Aligned_cols=35 Identities=26% Similarity=0.337 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhcCCCCcccCcc--EEeeccHHHHHHHHHh
Q 027514 71 VTSLAAVELLRARDGGQQIIDSVD--VTCGLSLGEYTALAFA 110 (222)
Q Consensus 71 ~~~~a~~~~l~~~~~gi~~~~~p~--~~~G~S~Ge~~A~~~a 110 (222)
.+.--+...+++.+ .+ .++ +++|+|+|-+.|+.++
T Consensus 97 ~l~~el~p~i~~~~-~~----~~~~~~i~G~S~GG~~Al~~~ 133 (251)
T PF00756_consen 97 FLTEELIPYIEANY-RT----DPDRRAIAGHSMGGYGALYLA 133 (251)
T ss_dssp HHHTHHHHHHHHHS-SE----EECCEEEEEETHHHHHHHHHH
T ss_pred ehhccchhHHHHhc-cc----ccceeEEeccCCCcHHHHHHH
Confidence 33334445566665 55 556 9999999999998865
No 71
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=59.54 E-value=13 Score=28.75 Aligned_cols=20 Identities=25% Similarity=0.149 Sum_probs=16.4
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
.+-.++|||+|-..|..++.
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred CcEEEEEechhHHHHHHHHH
Confidence 66789999999988886654
No 72
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=58.54 E-value=12 Score=29.26 Aligned_cols=36 Identities=31% Similarity=0.384 Sum_probs=24.5
Q ss_pred HHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccC
Q 027514 74 LAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAF 113 (222)
Q Consensus 74 ~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~ 113 (222)
.+..++++++.++. .-.++.|+|+|.+.|+-++...
T Consensus 89 ~aaldW~~~~hp~s----~~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 89 AAALDWLQARHPDS----ASCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred HHHHHHHHhhCCCc----hhhhhcccchHHHHHHHHHHhc
Confidence 34557778775443 2237899999999988877543
No 73
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=58.49 E-value=17 Score=29.59 Aligned_cols=32 Identities=28% Similarity=0.274 Sum_probs=20.4
Q ss_pred HHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHh
Q 027514 75 AAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 75 a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (222)
+.++.+++..+|+ +.-.++|||+|-+.++..+
T Consensus 87 ~~~~~l~~~~~g~----~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 87 AAIDAFREAAPHL----RRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHhhCCCC----CcEEEEEECHHHHHHHHHh
Confidence 3344455443244 4457899999998877654
No 74
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=57.14 E-value=49 Score=27.85 Aligned_cols=86 Identities=14% Similarity=0.127 Sum_probs=46.6
Q ss_pred ccCccEEeeccHHHHHHHHHhc-------cCCHHHHHHHHHHHHHHH-HHhhccCCCceEEEc--CCCHHHHHHHHHHhc
Q 027514 90 IDSVDVTCGLSLGEYTALAFAG-------AFSFEDGLKLVKLRGAAM-QEAADAAKGAMVSII--GLDSDKVQQLCDAAN 159 (222)
Q Consensus 90 ~~~p~~~~G~S~Ge~~A~~~aG-------~~~~~~a~~~~~~r~~~~-~~~~~~~~g~m~av~--~~~~~~~~~~l~~~~ 159 (222)
.+..|.++|-|.|-+.|+..+. .++.++++++-..++..+ .............+. ..+.+.+++++++.-
T Consensus 38 ~~~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~~~~IF~~~~~~~~~~~~~~~~~~y~~~~L~~~L~~~f 117 (329)
T cd07215 38 ADYFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLERGNYIFKKKIWNKIKSRGGFLNEKYSHKPLEEVLLEYF 117 (329)
T ss_pred hhccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHhhHhhcccchhhhhhhhccccccccCcHHHHHHHHHHh
Confidence 3356899999999988776542 478888888766554422 110000000011111 235677788777764
Q ss_pred ccCC---CCCcEEEEEeeC
Q 027514 160 QEVD---EDNKVQIANYLC 175 (222)
Q Consensus 160 ~~~~---~~~~~~ia~~ns 175 (222)
.+.. ....+.|.++|-
T Consensus 118 g~~~l~d~~~~~~i~a~d~ 136 (329)
T cd07215 118 GDTKLSELLKPCLITSYDI 136 (329)
T ss_pred CCCchhhhcCCceEEeeec
Confidence 3221 122456666653
No 75
>PRK07581 hypothetical protein; Validated
Probab=56.65 E-value=16 Score=30.56 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=17.3
Q ss_pred CCCcccCc-cEEeeccHHHHHHHHHhc
Q 027514 86 GQQIIDSV-DVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 86 gi~~~~~p-~~~~G~S~Ge~~A~~~aG 111 (222)
|+ ++ ..++|||+|-+.|+..+-
T Consensus 121 gi----~~~~~lvG~S~GG~va~~~a~ 143 (339)
T PRK07581 121 GI----ERLALVVGWSMGAQQTYHWAV 143 (339)
T ss_pred CC----CceEEEEEeCHHHHHHHHHHH
Confidence 87 66 478999999888875554
No 76
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=56.36 E-value=15 Score=29.91 Aligned_cols=20 Identities=15% Similarity=0.077 Sum_probs=16.3
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
++-.++|||+|-+.+..++.
T Consensus 87 ~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 87 EKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred CCEEEEEECchHHHHHHHHH
Confidence 67789999999988776654
No 77
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=56.32 E-value=17 Score=31.57 Aligned_cols=20 Identities=35% Similarity=0.371 Sum_probs=16.6
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
++-.++|||+|-+.|+.++.
T Consensus 176 ~~~~lvGhS~GG~la~~~a~ 195 (402)
T PLN02894 176 SNFILLGHSFGGYVAAKYAL 195 (402)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 77889999999988886554
No 78
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=55.82 E-value=17 Score=31.18 Aligned_cols=30 Identities=33% Similarity=0.366 Sum_probs=21.4
Q ss_pred HHHHHHhcCCCCcccCc-cEEeeccHHHHHHHHHhcc
Q 027514 77 VELLRARDGGQQIIDSV-DVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p-~~~~G~S~Ge~~A~~~aG~ 112 (222)
..++.+. |+ ++ ..++|||+|-..|+.++..
T Consensus 137 ~~~l~~l--~~----~~~~~lvG~S~Gg~ia~~~a~~ 167 (379)
T PRK00175 137 ARLLDAL--GI----TRLAAVVGGSMGGMQALEWAID 167 (379)
T ss_pred HHHHHHh--CC----CCceEEEEECHHHHHHHHHHHh
Confidence 4455665 77 66 4899999998887765543
No 79
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=55.13 E-value=56 Score=27.84 Aligned_cols=86 Identities=16% Similarity=0.201 Sum_probs=46.4
Q ss_pred ccCccEEeeccHHHHHHHHHhc-------cCCHHHHHHHHHHHHHHH-HHhhccCCC---ceEEE--cCCCHHHHHHHHH
Q 027514 90 IDSVDVTCGLSLGEYTALAFAG-------AFSFEDGLKLVKLRGAAM-QEAADAAKG---AMVSI--IGLDSDKVQQLCD 156 (222)
Q Consensus 90 ~~~p~~~~G~S~Ge~~A~~~aG-------~~~~~~a~~~~~~r~~~~-~~~~~~~~g---~m~av--~~~~~~~~~~~l~ 156 (222)
.+..|.++|-|.|-+.|+..+- .++.++.+++-..++.-+ ........+ .+..+ -..+.+.++++++
T Consensus 41 ~~~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y~~~~~~iF~~~~~~~~~~~~~~~~~~~~~y~~~~L~~~L~ 120 (349)
T cd07214 41 ADYFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFYLENGPKIFPQSTGQFEDDRKKLRSLLGPKYDGVYLHDLLN 120 (349)
T ss_pred hHhCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhHHhcCCCcccchhHHHHHHHhccCccCcHHHHHHHH
Confidence 3357999999999877776654 267888888765554322 110000000 00000 0235677777777
Q ss_pred HhcccCC---CCCcEEEEEeeC
Q 027514 157 AANQEVD---EDNKVQIANYLC 175 (222)
Q Consensus 157 ~~~~~~~---~~~~~~ia~~ns 175 (222)
+.-.+.. ...++.|.+++-
T Consensus 121 ~~~gd~~l~d~~~~v~I~a~dl 142 (349)
T cd07214 121 ELLGDTRLSDTLTNVVIPTFDI 142 (349)
T ss_pred HHhccccHhhhCCceEEEeEEC
Confidence 6643221 124567777763
No 80
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=55.06 E-value=15 Score=31.27 Aligned_cols=29 Identities=31% Similarity=0.377 Sum_probs=20.4
Q ss_pred HHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
+.||..- |+ .--.++|||+|-|-|+.-|-
T Consensus 151 E~WR~~~-~L----~KmilvGHSfGGYLaa~YAl 179 (365)
T KOG4409|consen 151 EQWRKKM-GL----EKMILVGHSFGGYLAAKYAL 179 (365)
T ss_pred HHHHHHc-CC----cceeEeeccchHHHHHHHHH
Confidence 4565543 77 55689999999987775543
No 81
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=53.19 E-value=13 Score=31.93 Aligned_cols=33 Identities=30% Similarity=0.199 Sum_probs=27.0
Q ss_pred CccEEeeccHHHHHHHHHhccCCHHHHHHHHHH
Q 027514 92 SVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 124 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~~~~~~a~~~~~~ 124 (222)
.+..++|||+|-++++..+|+-..-+.+...+.
T Consensus 159 ~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~ 191 (365)
T COG4188 159 QRVGVLGHSFGGYTAMELAGAELDAEALLQHCE 191 (365)
T ss_pred cceEEEecccccHHHHHhccccccHHHHHHHhh
Confidence 556899999999999999998776666666555
No 82
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=52.84 E-value=13 Score=27.63 Aligned_cols=25 Identities=28% Similarity=0.347 Sum_probs=17.6
Q ss_pred CccEEeeccHHHHHHHHHhccCCHH
Q 027514 92 SVDVTCGLSLGEYTALAFAGAFSFE 116 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~~~~~ 116 (222)
.+|.+.|-|.|-+.|++.+-..+.+
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~~~~ 51 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGYDPD 51 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-TCC
T ss_pred CccEEEEcChhhhhHHHHHhCCCHH
Confidence 8999999999999986544434433
No 83
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=52.40 E-value=16 Score=28.31 Aligned_cols=20 Identities=30% Similarity=0.330 Sum_probs=16.2
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
.|-.++|||+|-+.|..+|.
T Consensus 66 gp~~L~G~S~Gg~lA~E~A~ 85 (229)
T PF00975_consen 66 GPYVLAGWSFGGILAFEMAR 85 (229)
T ss_dssp SSEEEEEETHHHHHHHHHHH
T ss_pred CCeeehccCccHHHHHHHHH
Confidence 37799999999888776664
No 84
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=52.25 E-value=21 Score=30.87 Aligned_cols=30 Identities=27% Similarity=0.418 Sum_probs=19.9
Q ss_pred HHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHh
Q 027514 76 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 76 ~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (222)
+..++.+. |+. +..+++|||+|-..|+..+
T Consensus 150 ~~~ll~~l--gi~---~~~~vvG~SmGG~ial~~a 179 (389)
T PRK06765 150 QKELIKSL--GIA---RLHAVMGPSMGGMQAQEWA 179 (389)
T ss_pred HHHHHHHc--CCC---CceEEEEECHHHHHHHHHH
Confidence 34556666 872 3446999999987776443
No 85
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=51.78 E-value=20 Score=30.13 Aligned_cols=28 Identities=32% Similarity=0.349 Sum_probs=20.5
Q ss_pred HHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
.++.+. +. .+-.++|||+|-+.|+.++.
T Consensus 189 ~~~~~~--~~----~~~~lvG~S~Gg~~a~~~a~ 216 (371)
T PRK14875 189 AFLDAL--GI----ERAHLVGHSMGGAVALRLAA 216 (371)
T ss_pred HHHHhc--CC----ccEEEEeechHHHHHHHHHH
Confidence 344555 55 66799999999988886654
No 86
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=51.55 E-value=24 Score=26.94 Aligned_cols=20 Identities=35% Similarity=0.400 Sum_probs=16.0
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
.+-.++|||+|-..|+.++.
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~ 84 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAA 84 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHH
Confidence 57789999999988776553
No 87
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=50.95 E-value=20 Score=27.22 Aligned_cols=20 Identities=40% Similarity=0.331 Sum_probs=15.1
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
.+-.++|||+|...++.++-
T Consensus 88 ~~~~l~G~S~Gg~~~~~~~~ 107 (282)
T COG0596 88 EKVVLVGHSMGGAVALALAL 107 (282)
T ss_pred CceEEEEecccHHHHHHHHH
Confidence 55789999999766665443
No 88
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=50.84 E-value=20 Score=27.61 Aligned_cols=31 Identities=35% Similarity=0.271 Sum_probs=22.0
Q ss_pred HHHHHHHhcCCCCcccCcc--EEeeccHHHHHHHHHhc
Q 027514 76 AVELLRARDGGQQIIDSVD--VTCGLSLGEYTALAFAG 111 (222)
Q Consensus 76 ~~~~l~~~~~gi~~~~~p~--~~~G~S~Ge~~A~~~aG 111 (222)
..+.+++.. .+ .|+ .++|+|.|-+.++.++.
T Consensus 51 ~i~~l~~~~-~i----D~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 51 AIEYLIKQY-YI----DPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp HHHHHHHTT-SE----EEEEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHhccc-cc----cceeEEEEcccccccccchhhc
Confidence 345555553 44 555 78999999999888776
No 89
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=50.78 E-value=13 Score=29.30 Aligned_cols=18 Identities=33% Similarity=0.257 Sum_probs=13.7
Q ss_pred ccEEeeccHHHHHHHHHh
Q 027514 93 VDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 93 p~~~~G~S~Ge~~A~~~a 110 (222)
+-.+.|||+|--.|..++
T Consensus 129 ~i~vtGHSLGGaiA~l~a 146 (229)
T cd00519 129 KIIVTGHSLGGALASLLA 146 (229)
T ss_pred eEEEEccCHHHHHHHHHH
Confidence 347999999987666655
No 90
>PF05798 Phage_FRD3: Bacteriophage FRD3 protein; InterPro: IPR008765 This is a group of proteins of unknown function from bacteriophage T2 and related phage.
Probab=49.58 E-value=60 Score=20.45 Aligned_cols=43 Identities=9% Similarity=0.137 Sum_probs=28.6
Q ss_pred CCHHHHHHHHHHhcccCCCCCcEEEEEe-eCC---CCEEEEcCHHHHHHHHHH
Q 027514 146 LDSDKVQQLCDAANQEVDEDNKVQIANY-LCP---GNYAVSGGVKGIEAVEAK 194 (222)
Q Consensus 146 ~~~~~~~~~l~~~~~~~~~~~~~~ia~~-ns~---~~~visG~~~~l~~l~~~ 194 (222)
++.+.+.+++... ...+.|..+ |++ -+++|.||-+.|.++...
T Consensus 9 VDfEY~eEvIRNR------yPelsi~si~d~~f~~~~i~i~GPle~l~~FM~n 55 (75)
T PF05798_consen 9 VDFEYTEEVIRNR------YPELSITSIQDSKFCSIQIVIEGPLEDLTRFMAN 55 (75)
T ss_pred eehHhHHHHHHcc------CCceEEEEeecCCcceEEEEEeccHHHHHHHHHH
Confidence 4667777777643 445665554 444 346899999999988643
No 91
>COG1054 Predicted sulfurtransferase [General function prediction only]
Probab=49.34 E-value=84 Score=26.25 Aligned_cols=51 Identities=22% Similarity=0.169 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcC
Q 027514 147 DSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFK 199 (222)
Q Consensus 147 ~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~ 199 (222)
+.+.+.+.+.++.....-.+++.||.. .-+-+|||+.+.++++.+++.+..
T Consensus 18 dp~~~~~~l~~~~~~~~vkGrillA~E--GINgtvsG~~e~~~~~~~~l~a~~ 68 (308)
T COG1054 18 DPEALRDPLLALCKALGVKGRILLAHE--GINGTVSGSAEAIEAYMAWLRADP 68 (308)
T ss_pred CHHHHHHHHHHHHHHcCceeEEEEccC--CcceeEecCHHHHHHHHHHHHhCc
Confidence 445555555555444444678888873 333479999999999999999764
No 92
>cd02394 vigilin_like_KH K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has been shown to bind RNA and to associate with both soluble and membrane-bound polyribosomes as a mRNP component. Bicaudal-C is a RNA-binding molecule believed to function in embryonic development at the post-transcriptional level. In general, KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA.
Probab=49.28 E-value=36 Score=20.55 Aligned_cols=47 Identities=13% Similarity=0.332 Sum_probs=28.7
Q ss_pred EcCCCHHHHHHHHHHhcccCCCCCcEEEEEe-eCCCCEEEEcCHHHHHHHHHHH
Q 027514 143 IIGLDSDKVQQLCDAANQEVDEDNKVQIANY-LCPGNYAVSGGVKGIEAVEAKA 195 (222)
Q Consensus 143 v~~~~~~~~~~~l~~~~~~~~~~~~~~ia~~-ns~~~~visG~~~~l~~l~~~l 195 (222)
++|-.-..++++.++.+. .+.+... +..+.++|.|+++.+....+.+
T Consensus 14 iIG~~G~~i~~i~~~~g~------~I~i~~~~~~~~~v~I~G~~~~v~~A~~~i 61 (62)
T cd02394 14 IIGKKGSNIRKIMEETGV------KIRFPDPGSKSDTITITGPKENVEKAKEEI 61 (62)
T ss_pred ccCCCCCcHHHHHHHhCC------EEEcCCCCCCCCEEEEEcCHHHHHHHHHHh
Confidence 345555566666665532 2333332 2367789999999888776553
No 93
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=49.28 E-value=1.2e+02 Score=26.08 Aligned_cols=95 Identities=16% Similarity=0.088 Sum_probs=46.7
Q ss_pred CCcEEEEEcCcccchHHhhHhhhccHHHHHHHHHHHHHcCCChHHHhhcCCCccccCccchhhHHHHHHHHHHHHHHHhc
Q 027514 5 RSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARD 84 (222)
Q Consensus 5 ~~~~~~~F~GqG~~~~~~~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~a~~~~l~~~~ 84 (222)
..|-++++-|-|..|.....-+..+..+. +..+.++.++.-+-+++-.. .......-.+...--|+.+.|++..
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~----~~ak~~~aNvl~fNYpGVg~--S~G~~s~~dLv~~~~a~v~yL~d~~ 209 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQ----RFAKELGANVLVFNYPGVGS--STGPPSRKDLVKDYQACVRYLRDEE 209 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHH----HHHHHcCCcEEEECCCcccc--CCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 35667777787776655222111111222 22333443433222222100 1111122445555667778887533
Q ss_pred CCCCcccCcc--EEeeccHHHHHHHHH
Q 027514 85 GGQQIIDSVD--VTCGLSLGEYTALAF 109 (222)
Q Consensus 85 ~gi~~~~~p~--~~~G~S~Ge~~A~~~ 109 (222)
.|+ .|. .+-|||+|--.++.+
T Consensus 210 ~G~----ka~~Ii~yG~SLGG~Vqa~A 232 (365)
T PF05677_consen 210 QGP----KAKNIILYGHSLGGGVQAEA 232 (365)
T ss_pred cCC----ChheEEEeeccccHHHHHHH
Confidence 266 665 678999997765543
No 94
>PRK05320 rhodanese superfamily protein; Provisional
Probab=49.02 E-value=76 Score=25.82 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhc
Q 027514 147 DSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSF 198 (222)
Q Consensus 147 ~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~ 198 (222)
+.+.+.+.+.++.....-.+++.||.. .-+.+|||+.+.++.+...++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~G~i~ia~e--GiN~t~~g~~~~id~~~~~l~~~ 65 (257)
T PRK05320 16 DPETLRPLVLARCEALGLKGTILLAPE--GINLFLAGTREAIDAFYAWLRAD 65 (257)
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEEcCC--CceEEEEeeHHHHHHHHHHHhhC
Confidence 345555555555444445678888874 22457999999999999998863
No 95
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=49.00 E-value=16 Score=26.74 Aligned_cols=17 Identities=29% Similarity=0.040 Sum_probs=13.1
Q ss_pred cEEeeccHHHHHHHHHh
Q 027514 94 DVTCGLSLGEYTALAFA 110 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~~a 110 (222)
-.++|||+|--.|..++
T Consensus 30 i~v~GHSlGg~lA~l~a 46 (153)
T cd00741 30 IHVTGHSLGGALAGLAG 46 (153)
T ss_pred EEEEEcCHHHHHHHHHH
Confidence 37899999976666655
No 96
>PHA02857 monoglyceride lipase; Provisional
Probab=48.94 E-value=28 Score=27.85 Aligned_cols=20 Identities=20% Similarity=0.072 Sum_probs=16.5
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
.|-.++|||+|-..|+..+.
T Consensus 97 ~~~~lvG~S~GG~ia~~~a~ 116 (276)
T PHA02857 97 VPVFLLGHSMGATISILAAY 116 (276)
T ss_pred CCEEEEEcCchHHHHHHHHH
Confidence 56789999999988887663
No 97
>PRK01415 hypothetical protein; Validated
Probab=48.81 E-value=85 Score=25.45 Aligned_cols=49 Identities=12% Similarity=0.017 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhc
Q 027514 148 SDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSF 198 (222)
Q Consensus 148 ~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~ 198 (222)
.+.+.+.+.+......-.+++.||.. .-+.+|||+.+.++++.+.+++.
T Consensus 19 ~~~~~~~l~~~~~~~~~~G~i~la~E--GIN~tisg~~~~~~~~~~~l~~~ 67 (247)
T PRK01415 19 PANLIPKLLLIGKRKYVRGTILLANE--GFNGSFSGSYENVNLVLEELIKL 67 (247)
T ss_pred HHHHHHHHHHHHHHcCCeeEEEEccC--ccceEeeCCHHHHHHHHHHHHhC
Confidence 34444444444443444678888874 22458999999999999999873
No 98
>PRK10985 putative hydrolase; Provisional
Probab=48.61 E-value=25 Score=29.36 Aligned_cols=16 Identities=25% Similarity=0.254 Sum_probs=12.8
Q ss_pred CccEEeeccHHHHHHH
Q 027514 92 SVDVTCGLSLGEYTAL 107 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~ 107 (222)
.|-.++|||+|-..++
T Consensus 131 ~~~~~vG~S~GG~i~~ 146 (324)
T PRK10985 131 VPTAAVGYSLGGNMLA 146 (324)
T ss_pred CCEEEEEecchHHHHH
Confidence 6789999999986433
No 99
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=48.42 E-value=1.6e+02 Score=24.61 Aligned_cols=178 Identities=15% Similarity=0.104 Sum_probs=87.4
Q ss_pred EEEEcCcccchHHhhHh-hhccHHH-HHHHHHHHHHc----------CCChHHHhhcCCCccccC---ccchhhHHHHHH
Q 027514 9 LFYVLSQGAQAVGMGKE-AQSVPAA-AELYKKANDIL----------GFDLLEICTNGPKEKLDS---TIISQPAIYVTS 73 (222)
Q Consensus 9 ~~~F~GqG~~~~~~~~~-~~~~p~~-~~~~~~~~~~l----------g~~l~~~~~~~~~~~~~~---~~~~~~~i~~~~ 73 (222)
.++.-|-|+......+. +.++|.+ +..+....+++ |-.....+. .-..++.. ...+.|.+--+-
T Consensus 159 ~YmiEGGgSkt~~~aK~w~~~~Pe~sh~lL~~lTda~v~Yl~~Qv~aGAq~lQiFe-SwageLspe~f~e~s~PYl~~I~ 237 (359)
T KOG2872|consen 159 TYMIEGGGSKTFTQAKRWLFQYPEVSHALLQILTDAIVEYLVYQVVAGAQALQIFE-SWAGELSPEDFEEFSLPYLRQIA 237 (359)
T ss_pred eeeecCCCchhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-HhcccCCHHHHHHhhhHHHHHHH
Confidence 46667778877776666 5667765 45555544432 222222221 11111221 233444444444
Q ss_pred HHHHHHHHHhcCCCCcccCcc-EEeeccHHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHH---hhccCCCceEEEcCCC
Q 027514 74 LAAVELLRARDGGQQIIDSVD-VTCGLSLGEYTALAFAG--AFSFEDGLKLVKLRGAAMQE---AADAAKGAMVSIIGLD 147 (222)
Q Consensus 74 ~a~~~~l~~~~~gi~~~~~p~-~~~G~S~Ge~~A~~~aG--~~~~~~a~~~~~~r~~~~~~---~~~~~~g~m~av~~~~ 147 (222)
-++-..+.+. ++.. -|- .++--|-|.+--++.+| +++++..+...-.|.+.=.+ -++-.++.|+.-...-
T Consensus 238 ~~Vk~rl~~~--~~~~--vPmi~fakG~g~~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~i 313 (359)
T KOG2872|consen 238 EAVKKRLPEL--GLAP--VPMILFAKGSGGALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEI 313 (359)
T ss_pred HHHHHhhhhh--cCCC--CceEEEEcCcchHHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHH
Confidence 4455566665 5421 232 33444555566666666 33444433333332221111 1112344444432222
Q ss_pred HHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcC
Q 027514 148 SDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFK 199 (222)
Q Consensus 148 ~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~ 199 (222)
.+.+++.++.+ +..=||++. ..-+...-+++.+..|.+.+.+.+
T Consensus 314 t~~v~~mv~~f------G~~ryI~NL--GHGi~p~tp~e~v~~f~E~~h~~~ 357 (359)
T KOG2872|consen 314 TQLVKQMVKDF------GKSRYIANL--GHGITPGTPPEHVAHFVEAVHKIG 357 (359)
T ss_pred HHHHHHHHHHh------CccceEEec--CCCCCCCCCHHHHHHHHHHHHHhc
Confidence 34555566655 344567764 444556667889999988877654
No 100
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=48.16 E-value=15 Score=29.09 Aligned_cols=19 Identities=21% Similarity=0.195 Sum_probs=15.6
Q ss_pred CccEEeeccHHHHHHHHHh
Q 027514 92 SVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (222)
++-.++|||+|-+.|-.+.
T Consensus 85 ~~vilVgHSmGGlvar~~l 103 (225)
T PF07819_consen 85 RSVILVGHSMGGLVARSAL 103 (225)
T ss_pred CceEEEEEchhhHHHHHHH
Confidence 6678999999988877655
No 101
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=48.06 E-value=27 Score=28.40 Aligned_cols=28 Identities=14% Similarity=0.093 Sum_probs=18.8
Q ss_pred HHHHHhcCCCCcccCccEEeeccHHHHHHHHHh
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (222)
..|++.+ ++ +---++|||+|-+++.+..
T Consensus 94 ~~L~~~Y-~~----~~~N~VGHSmGg~~~~~yl 121 (255)
T PF06028_consen 94 KYLKKKY-HF----KKFNLVGHSMGGLSWTYYL 121 (255)
T ss_dssp HHHHHCC-------SEEEEEEETHHHHHHHHHH
T ss_pred HHHHHhc-CC----CEEeEEEECccHHHHHHHH
Confidence 3456655 77 5557899999988877653
No 102
>PRK06489 hypothetical protein; Provisional
Probab=47.81 E-value=26 Score=29.68 Aligned_cols=20 Identities=20% Similarity=0.230 Sum_probs=15.0
Q ss_pred Ccc-EEeeccHHHHHHHHHhc
Q 027514 92 SVD-VTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~-~~~G~S~Ge~~A~~~aG 111 (222)
++. .++|||+|-+.|+..+.
T Consensus 153 ~~~~~lvG~SmGG~vAl~~A~ 173 (360)
T PRK06489 153 KHLRLILGTSMGGMHAWMWGE 173 (360)
T ss_pred CceeEEEEECHHHHHHHHHHH
Confidence 554 58999999888776553
No 103
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=47.13 E-value=26 Score=30.92 Aligned_cols=20 Identities=15% Similarity=0.082 Sum_probs=17.0
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
+|..++|||+|-+.+.+...
T Consensus 162 ~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 162 KKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred CCEEEEEECHhHHHHHHHHH
Confidence 78899999999988886654
No 104
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=46.77 E-value=58 Score=31.51 Aligned_cols=43 Identities=19% Similarity=0.299 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDG 118 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~a 118 (222)
-+.++++...|++. || ..|++.|-|+|.+..+..|-.-+.-..
T Consensus 851 G~ahiGvl~ALeE~--GI----PvD~VGGTSIGafiGaLYA~e~d~~~v 893 (1158)
T KOG2968|consen 851 GAAHIGVLQALEEA--GI----PVDMVGGTSIGAFIGALYAEERDLVPV 893 (1158)
T ss_pred hhhHHHHHHHHHHc--CC----CeeeeccccHHHhhhhhhhccCcchHH
Confidence 47789999999999 99 789999999999876655555554433
No 105
>PRK10566 esterase; Provisional
Probab=46.60 E-value=27 Score=27.50 Aligned_cols=19 Identities=32% Similarity=0.323 Sum_probs=15.3
Q ss_pred ccEEeeccHHHHHHHHHhc
Q 027514 93 VDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 93 p~~~~G~S~Ge~~A~~~aG 111 (222)
.-+++|||+|-+.++.++-
T Consensus 108 ~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 108 RLAVGGASMGGMTALGIMA 126 (249)
T ss_pred ceeEEeecccHHHHHHHHH
Confidence 3589999999988887653
No 106
>PLN02872 triacylglycerol lipase
Probab=45.56 E-value=47 Score=28.88 Aligned_cols=20 Identities=30% Similarity=0.162 Sum_probs=16.2
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
++-.++|||+|-..++.+..
T Consensus 160 ~~v~~VGhS~Gg~~~~~~~~ 179 (395)
T PLN02872 160 SKIFIVGHSQGTIMSLAALT 179 (395)
T ss_pred CceEEEEECHHHHHHHHHhh
Confidence 56789999999988886553
No 107
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=45.56 E-value=1.2e+02 Score=23.55 Aligned_cols=88 Identities=19% Similarity=0.177 Sum_probs=45.4
Q ss_pred cEEEEEcCcccchHHhhHhhhccHHHHHHHHHH-HHHcCCChHHHhhcCCCccccCccchhhHHHHHHHH--HHHHHHHh
Q 027514 7 LLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKA-NDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLA--AVELLRAR 83 (222)
Q Consensus 7 ~~~~~F~GqG~~~~~~~~~~~~~p~~~~~~~~~-~~~lg~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~a--~~~~l~~~ 83 (222)
.++++|+|.|-.. ++.+. +.+.+.+. -.++|+|-...+..... |.-++..++ +-...++|
T Consensus 3 t~~v~~SGDgGw~-~~d~~------~a~~l~~~G~~VvGvdsl~Yfw~~rt----------P~~~a~Dl~~~i~~y~~~w 65 (192)
T PF06057_consen 3 TLAVFFSGDGGWR-DLDKQ------IAEALAKQGVPVVGVDSLRYFWSERT----------PEQTAADLARIIRHYRARW 65 (192)
T ss_pred EEEEEEeCCCCch-hhhHH------HHHHHHHCCCeEEEechHHHHhhhCC----------HHHHHHHHHHHHHHHHHHh
Confidence 4789999987642 33322 22222211 12356776665543211 111222222 22344566
Q ss_pred cCCCCcccCccEEeeccHHHHHHHHHhccCCHHH
Q 027514 84 DGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFED 117 (222)
Q Consensus 84 ~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~ 117 (222)
+. +.-.++|+|+|.=..-++...+....
T Consensus 66 --~~----~~vvLiGYSFGADvlP~~~nrLp~~~ 93 (192)
T PF06057_consen 66 --GR----KRVVLIGYSFGADVLPFIYNRLPAAL 93 (192)
T ss_pred --CC----ceEEEEeecCCchhHHHHHhhCCHHH
Confidence 55 66689999999755555555555443
No 108
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=45.01 E-value=18 Score=30.05 Aligned_cols=21 Identities=24% Similarity=0.237 Sum_probs=16.0
Q ss_pred CccEEeeccHHHHHHHHHhcc
Q 027514 92 SVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
.|-+++|||+|--.|++++-.
T Consensus 146 ~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 146 PQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred CceEEEeccccchhhhhhhhh
Confidence 566899999997777766543
No 109
>PRK10749 lysophospholipase L2; Provisional
Probab=44.24 E-value=36 Score=28.44 Aligned_cols=18 Identities=17% Similarity=0.108 Sum_probs=14.6
Q ss_pred CccEEeeccHHHHHHHHH
Q 027514 92 SVDVTCGLSLGEYTALAF 109 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ 109 (222)
.|-.++|||+|-..|+..
T Consensus 131 ~~~~l~GhSmGG~ia~~~ 148 (330)
T PRK10749 131 RKRYALAHSMGGAILTLF 148 (330)
T ss_pred CCeEEEEEcHHHHHHHHH
Confidence 677999999998877643
No 110
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=43.51 E-value=35 Score=28.06 Aligned_cols=20 Identities=35% Similarity=0.273 Sum_probs=16.0
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
++-.++|||+|-..++..+.
T Consensus 95 ~~~~lvG~S~GG~ia~~~a~ 114 (306)
T TIGR01249 95 KNWLVFGGSWGSTLALAYAQ 114 (306)
T ss_pred CCEEEEEECHHHHHHHHHHH
Confidence 66789999999888776654
No 111
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=43.24 E-value=44 Score=26.29 Aligned_cols=14 Identities=21% Similarity=0.178 Sum_probs=11.9
Q ss_pred CccEEeeccHHHHH
Q 027514 92 SVDVTCGLSLGEYT 105 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~ 105 (222)
+|=+++|||+|..-
T Consensus 95 RPfILaGHSQGs~~ 108 (207)
T PF11288_consen 95 RPFILAGHSQGSMH 108 (207)
T ss_pred CCEEEEEeChHHHH
Confidence 78899999999543
No 112
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=43.19 E-value=24 Score=24.86 Aligned_cols=20 Identities=25% Similarity=0.234 Sum_probs=16.8
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
.+-+++|||+|-..++.++.
T Consensus 61 ~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 61 DRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp CEEEEEEETHHHHHHHHHHH
T ss_pred CcEEEEEEccCcHHHHHHhh
Confidence 66799999999888887665
No 113
>PRK03204 haloalkane dehalogenase; Provisional
Probab=42.53 E-value=33 Score=27.94 Aligned_cols=27 Identities=22% Similarity=0.284 Sum_probs=18.9
Q ss_pred HHHHHhcCCCCcccCccEEeeccHHHHHHHHHh
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (222)
.++.+. ++ ++-.++|||+|-..|...+
T Consensus 93 ~~~~~~--~~----~~~~lvG~S~Gg~va~~~a 119 (286)
T PRK03204 93 EFVDHL--GL----DRYLSMGQDWGGPISMAVA 119 (286)
T ss_pred HHHHHh--CC----CCEEEEEECccHHHHHHHH
Confidence 344445 66 7789999999987665443
No 114
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=42.18 E-value=36 Score=28.68 Aligned_cols=19 Identities=21% Similarity=0.249 Sum_probs=15.2
Q ss_pred CccEEeeccHHHHHHHHHh
Q 027514 92 SVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (222)
++-.++|||+|-..++..+
T Consensus 136 ~~i~lvGhS~GG~i~~~~~ 154 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYA 154 (350)
T ss_pred CcccEEEECHHHHHHHHHH
Confidence 6778999999987776543
No 115
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=42.06 E-value=20 Score=28.50 Aligned_cols=23 Identities=22% Similarity=-0.071 Sum_probs=18.1
Q ss_pred ccEEeeccHHHHHHHHHhccCCH
Q 027514 93 VDVTCGLSLGEYTALAFAGAFSF 115 (222)
Q Consensus 93 p~~~~G~S~Ge~~A~~~aG~~~~ 115 (222)
+-.+.|||+|-.-|.+++-.++.
T Consensus 85 ~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 85 KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred CEEEEEechhhHHHHHHHHHccH
Confidence 45789999999888888766443
No 116
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=41.60 E-value=38 Score=26.41 Aligned_cols=27 Identities=22% Similarity=0.302 Sum_probs=17.6
Q ss_pred HHHHHHhcCCCCcccCccEEeeccHHHHHHHHHh
Q 027514 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (222)
.+.+++. | .-|.++|.|+|...|+..+
T Consensus 94 ~~~i~~~--G-----PfdGvlGFSQGA~lAa~ll 120 (212)
T PF03959_consen 94 RDYIEEN--G-----PFDGVLGFSQGAALAALLL 120 (212)
T ss_dssp HHHHHHH----------SEEEEETHHHHHHHHHH
T ss_pred HHHHHhc--C-----CeEEEEeecHHHHHHHHHH
Confidence 4466666 3 3489999999977665543
No 117
>PRK11460 putative hydrolase; Provisional
Probab=41.10 E-value=48 Score=26.19 Aligned_cols=17 Identities=29% Similarity=0.323 Sum_probs=13.7
Q ss_pred cEEeeccHHHHHHHHHh
Q 027514 94 DVTCGLSLGEYTALAFA 110 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~~a 110 (222)
-+++|+|+|-..|+..+
T Consensus 105 i~l~GfS~Gg~~al~~a 121 (232)
T PRK11460 105 TALIGFSQGAIMALEAV 121 (232)
T ss_pred EEEEEECHHHHHHHHHH
Confidence 48999999988877544
No 118
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=40.94 E-value=35 Score=28.78 Aligned_cols=21 Identities=33% Similarity=0.218 Sum_probs=17.1
Q ss_pred CccEEeeccHHHHHHHHHhcc
Q 027514 92 SVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
+|-.++|||+|-+.|..+|-.
T Consensus 128 ~~~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 128 EPVSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred cceEEEEeCcHHHHHHHHHHh
Confidence 778899999999888766543
No 119
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=40.35 E-value=45 Score=25.71 Aligned_cols=22 Identities=32% Similarity=0.350 Sum_probs=17.5
Q ss_pred ccEEeeccHHHHHHHHHhccCC
Q 027514 93 VDVTCGLSLGEYTALAFAGAFS 114 (222)
Q Consensus 93 p~~~~G~S~Ge~~A~~~aG~~~ 114 (222)
...++|.|+|-+-|.+.+-...
T Consensus 60 ~~~liGSSlGG~~A~~La~~~~ 81 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLAERYG 81 (187)
T ss_pred CeEEEEEChHHHHHHHHHHHhC
Confidence 3589999999999998864443
No 120
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=40.13 E-value=44 Score=25.82 Aligned_cols=18 Identities=22% Similarity=0.156 Sum_probs=14.4
Q ss_pred ccEEeeccHHHHHHHHHh
Q 027514 93 VDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 93 p~~~~G~S~Ge~~A~~~a 110 (222)
.-+++|||+|-+.++..+
T Consensus 96 ~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 96 RVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred heEEEEECHHHHHHHHHH
Confidence 358999999988777655
No 121
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=39.33 E-value=23 Score=28.97 Aligned_cols=22 Identities=23% Similarity=0.005 Sum_probs=17.5
Q ss_pred CccEEeeccHHHHHHHHHhccC
Q 027514 92 SVDVTCGLSLGEYTALAFAGAF 113 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~~ 113 (222)
+.-.++|||+|-..|..++..+
T Consensus 112 ~~i~lIGhSlGa~vAg~~a~~~ 133 (275)
T cd00707 112 ENVHLIGHSLGAHVAGFAGKRL 133 (275)
T ss_pred HHEEEEEecHHHHHHHHHHHHh
Confidence 4458999999999988887543
No 122
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=39.21 E-value=37 Score=30.37 Aligned_cols=27 Identities=30% Similarity=0.119 Sum_probs=20.7
Q ss_pred HHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 79 LLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 79 ~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
++... |+ .+-.++|||+|-+.|+.++.
T Consensus 267 ll~~l--g~----~k~~LVGhSmGG~iAl~~A~ 293 (481)
T PLN03087 267 VLERY--KV----KSFHIVAHSLGCILALALAV 293 (481)
T ss_pred HHHHc--CC----CCEEEEEECHHHHHHHHHHH
Confidence 34444 77 78889999999988887664
No 123
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=39.05 E-value=24 Score=28.78 Aligned_cols=23 Identities=26% Similarity=0.342 Sum_probs=17.5
Q ss_pred CccEEeeccHHHHHHHHHhccCC
Q 027514 92 SVDVTCGLSLGEYTALAFAGAFS 114 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~~~ 114 (222)
.+-.++|||+|.|-++=......
T Consensus 84 ~~liLiGHSIGayi~levl~r~~ 106 (266)
T PF10230_consen 84 VKLILIGHSIGAYIALEVLKRLP 106 (266)
T ss_pred CcEEEEeCcHHHHHHHHHHHhcc
Confidence 34589999999999986655444
No 124
>PF13117 Cag12: Cag pathogenicity island protein Cag12
Probab=38.51 E-value=1e+02 Score=21.76 Aligned_cols=37 Identities=11% Similarity=-0.091 Sum_probs=30.7
Q ss_pred EEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceE
Q 027514 168 VQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTV 204 (222)
Q Consensus 168 ~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~ 204 (222)
.+-+...+++.+|++|+.....+...+|+++|++..+
T Consensus 73 ~~yalAH~~~iIv~~~~~~~~~~~K~wL~~nGa~avI 109 (113)
T PF13117_consen 73 VFYALAHSAKIIVLTGDGNLFFQYKNWLRKNGATAVI 109 (113)
T ss_pred EeeeeeccccEEEEcCCHHHHHHHHHHHHHcCCceeE
Confidence 4555556789999999999999999999999994443
No 125
>PF10369 ALS_ss_C: Small subunit of acetolactate synthase; InterPro: IPR019455 This entry represents the C-terminal domain of the small subunit of acetolactate synthase (the N-terminal domain being an ACT domain). Acetolactate synthase is a tetrameric enzyme, composed of two large and two small subunits, which catalyses the first step in branched-chain amino acid biosynthesis. This reaction is sensitive to certain herbicides []. ; PDB: 2F1F_B 2FGC_A 2PC6_A.
Probab=38.49 E-value=1e+02 Score=19.76 Aligned_cols=46 Identities=20% Similarity=0.301 Sum_probs=31.2
Q ss_pred CHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCE--EEEcCHHHHHHHHHHHHhcCCC
Q 027514 147 DSDKVQQLCDAANQEVDEDNKVQIANYLCPGNY--AVSGGVKGIEAVEAKAKSFKAR 201 (222)
Q Consensus 147 ~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~--visG~~~~l~~l~~~l~~~~~~ 201 (222)
...++.++++.++ ..|.-++ ++.+ -++|+++.++.|.+.++..|+.
T Consensus 15 ~r~ei~~l~~~f~--------a~ivd~~-~~~~iie~tG~~~kid~fi~~l~~~gi~ 62 (75)
T PF10369_consen 15 NRSEILQLAEIFR--------ARIVDVS-PDSIIIELTGTPEKIDAFIKLLKPFGIL 62 (75)
T ss_dssp HHHHHHHHHHHTT---------EEEEEE-TTEEEEEEEE-HHHHHHHHHHSTGGGEE
T ss_pred CHHHHHHHHHHhC--------CEEEEEC-CCEEEEEEcCCHHHHHHHHHHhhhcCCE
Confidence 3456777777663 4444544 4454 4579999999999999988763
No 126
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=37.92 E-value=26 Score=29.13 Aligned_cols=19 Identities=21% Similarity=0.167 Sum_probs=15.2
Q ss_pred CccEEeeccHHHHHHHHHh
Q 027514 92 SVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (222)
.|-+++|||+|-..|+.++
T Consensus 134 ~~i~l~GhSmGG~ia~~~a 152 (330)
T PLN02298 134 LPRFLYGESMGGAICLLIH 152 (330)
T ss_pred CCEEEEEecchhHHHHHHH
Confidence 3569999999998877554
No 127
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=37.89 E-value=42 Score=28.64 Aligned_cols=34 Identities=21% Similarity=0.155 Sum_probs=22.8
Q ss_pred HHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 74 LAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 74 ~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
..+++.|.+..-|- +|--++|||+|.-...+|--
T Consensus 206 ~~LA~~L~~~~~G~----RpVtLvG~SLGarvI~~cL~ 239 (345)
T PF05277_consen 206 KVLADALLSRNQGE----RPVTLVGHSLGARVIYYCLL 239 (345)
T ss_pred HHHHHHHHHhcCCC----CceEEEeecccHHHHHHHHH
Confidence 44556555442266 89999999999766655543
No 128
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=37.32 E-value=47 Score=28.51 Aligned_cols=45 Identities=27% Similarity=0.396 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCcc--EEeeccHHHHHHHHHhccC----------CHHHHHHHHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVD--VTCGLSLGEYTALAFAGAF----------SFEDGLKLVKL 124 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~--~~~G~S~Ge~~A~~~aG~~----------~~~~a~~~~~~ 124 (222)
.++|+|+-.+ |. +++ ++.|.|.|-++++++|-.. +++|.+.++..
T Consensus 297 aVvQfAI~~L------gf----~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~ 353 (517)
T KOG1553|consen 297 AVVQFAIQVL------GF----RQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALF 353 (517)
T ss_pred HHHHHHHHHc------CC----CccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhh
Confidence 4567777543 54 342 6799999999999998765 57787777653
No 129
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=37.22 E-value=32 Score=26.15 Aligned_cols=18 Identities=33% Similarity=0.254 Sum_probs=14.5
Q ss_pred HHHHHhcCCCCcccCccEEeeccH
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSL 101 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~ 101 (222)
..|++. |. .||.++|||-
T Consensus 58 ~~L~~~--Gf----~PDvI~~H~G 75 (171)
T PF12000_consen 58 RQLRAQ--GF----VPDVIIAHPG 75 (171)
T ss_pred HHHHHc--CC----CCCEEEEcCC
Confidence 456666 88 9999999984
No 130
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=36.57 E-value=27 Score=29.42 Aligned_cols=19 Identities=26% Similarity=0.239 Sum_probs=15.1
Q ss_pred CccEEeeccHHHHHHHHHh
Q 027514 92 SVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (222)
.|-.++|||+|-..|+.++
T Consensus 162 ~~~~LvGhSmGG~val~~a 180 (349)
T PLN02385 162 LPSFLFGQSMGGAVALKVH 180 (349)
T ss_pred CCEEEEEeccchHHHHHHH
Confidence 3679999999988877554
No 131
>PRK05855 short chain dehydrogenase; Validated
Probab=35.72 E-value=65 Score=28.86 Aligned_cols=21 Identities=5% Similarity=-0.145 Sum_probs=16.2
Q ss_pred CccEEeeccHHHHHHHHHhcc
Q 027514 92 SVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
.|-.++|||+|-+.++.++..
T Consensus 94 ~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 94 RPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CcEEEEecChHHHHHHHHHhC
Confidence 567899999999877655544
No 132
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=35.42 E-value=32 Score=28.57 Aligned_cols=18 Identities=28% Similarity=0.292 Sum_probs=14.4
Q ss_pred CccEEeeccHHHHHHHHH
Q 027514 92 SVDVTCGLSLGEYTALAF 109 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ 109 (222)
.|-+++|||+|-..|+.+
T Consensus 107 ~p~~l~gHSmGg~Ia~~~ 124 (298)
T COG2267 107 LPVFLLGHSMGGLIALLY 124 (298)
T ss_pred CCeEEEEeCcHHHHHHHH
Confidence 678999999998666644
No 133
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=35.09 E-value=86 Score=29.77 Aligned_cols=20 Identities=35% Similarity=0.404 Sum_probs=17.8
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
.++.+.|.|.|.+.++..|.
T Consensus 66 ~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 66 RVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCceEEeeCHHHHHHHHHHc
Confidence 88999999999998877775
No 134
>PF09383 NIL: NIL domain; InterPro: IPR018449 This domain is found at the C terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a conserved sequence in some members of the family. ; PDB: 2QRR_A 3CED_A 2QSW_A 3TUZ_D 3TUJ_D 3DHX_B 3TUI_H 3DHW_D.
Probab=35.03 E-value=69 Score=20.28 Aligned_cols=24 Identities=17% Similarity=0.079 Sum_probs=19.2
Q ss_pred EEEcCHHHHHHHHHHHHhcCCCceE
Q 027514 180 AVSGGVKGIEAVEAKAKSFKARMTV 204 (222)
Q Consensus 180 visG~~~~l~~l~~~l~~~~~~~~~ 204 (222)
-+.|+.+.+++..+++++.++ .+.
T Consensus 51 ~l~g~~~~~~~a~~~L~~~~v-~vE 74 (76)
T PF09383_consen 51 ELPGDDEEIEKAIAYLREQGV-EVE 74 (76)
T ss_dssp EEES-HHHHHHHHHHHHHTTE-EEE
T ss_pred EEECCHHHHHHHHHHHHHCCC-eEE
Confidence 567999999999999999987 443
No 135
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=34.89 E-value=24 Score=29.69 Aligned_cols=16 Identities=38% Similarity=0.337 Sum_probs=13.0
Q ss_pred CccEEeeccHHHHHHH
Q 027514 92 SVDVTCGLSLGEYTAL 107 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~ 107 (222)
.|-+++|||+|-..++
T Consensus 142 ~p~~l~GhSmGg~i~~ 157 (332)
T TIGR01607 142 LPMYIIGLSMGGNIAL 157 (332)
T ss_pred CceeEeeccCccHHHH
Confidence 5779999999985554
No 136
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=34.57 E-value=59 Score=28.79 Aligned_cols=20 Identities=25% Similarity=0.062 Sum_probs=16.4
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
+.-.++|||+|.-.|..++.
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~ 138 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGS 138 (442)
T ss_pred CcEEEEEECHHHHHHHHHHH
Confidence 56689999999988887653
No 137
>PRK04940 hypothetical protein; Provisional
Probab=34.34 E-value=40 Score=25.89 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=17.3
Q ss_pred CccEEeeccHHHHHHHHHhcc
Q 027514 92 SVDVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~ 112 (222)
+|..++|.|+|-+=|.+.+-.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~ 80 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFL 80 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHH
Confidence 578999999999888876643
No 138
>PF02519 Auxin_inducible: Auxin responsive protein; InterPro: IPR003676 This family consists of the protein products of a gene cluster that encodes a group of auxin-regulated RNAs (small auxin up RNAs, SAURs) []. Proteins from this ARG7 auxin responsive genes family have no identified functional role [].
Probab=32.72 E-value=61 Score=22.25 Aligned_cols=40 Identities=18% Similarity=0.192 Sum_probs=26.2
Q ss_pred cEEEEEcCcccchHHhhHhhhccHHHHHHHHHHHHHcCCC
Q 027514 7 LLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFD 46 (222)
Q Consensus 7 ~~~~~F~GqG~~~~~~~~~~~~~p~~~~~~~~~~~~lg~~ 46 (222)
..+.|+-|....-.-.-..|.++|.|++.++.+.+-+|++
T Consensus 39 G~~~VyVG~~~~Rfvvp~~~L~hp~f~~LL~~aeeEfG~~ 78 (100)
T PF02519_consen 39 GHFAVYVGEERRRFVVPVSYLNHPLFQELLEQAEEEFGFD 78 (100)
T ss_pred CeEEEEeCccceEEEechHHcCchhHHHHHHHHhhhcCcC
Confidence 3455666662222212223678999999999999887765
No 139
>COG0400 Predicted esterase [General function prediction only]
Probab=31.96 E-value=72 Score=25.07 Aligned_cols=23 Identities=30% Similarity=0.393 Sum_probs=16.1
Q ss_pred CCCcccCccEEeeccHHHHHHHHHh
Q 027514 86 GQQIIDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 86 gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (222)
|+. .+.-+++|+|.|..-++...
T Consensus 95 gi~--~~~ii~~GfSqGA~ial~~~ 117 (207)
T COG0400 95 GID--SSRIILIGFSQGANIALSLG 117 (207)
T ss_pred CCC--hhheEEEecChHHHHHHHHH
Confidence 661 13458899999987777643
No 140
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=31.71 E-value=53 Score=29.50 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhccCCHHH
Q 027514 70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFED 117 (222)
Q Consensus 70 ~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG~~~~~~ 117 (222)
-++-+++.+-|-+. +. -|.++.|-|.|.+.|+.++ +.+-||
T Consensus 186 GlfH~GVlrtL~e~--dL----lP~IIsGsS~GaivAsl~~-v~~~eE 226 (543)
T KOG2214|consen 186 GLFHIGVLRTLLEQ--DL----LPNIISGSSAGAIVASLVG-VRSNEE 226 (543)
T ss_pred hhhHHHHHHHHHHc--cc----cchhhcCCchhHHHHHHHh-hcchHH
Confidence 35678888877776 66 7999999999999887654 445444
No 141
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=30.31 E-value=80 Score=27.38 Aligned_cols=20 Identities=25% Similarity=0.092 Sum_probs=16.1
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
.|-.++|||+|-+.++.++.
T Consensus 208 ~~i~lvGhSmGG~ial~~a~ 227 (395)
T PLN02652 208 VPCFLFGHSTGGAVVLKAAS 227 (395)
T ss_pred CCEEEEEECHHHHHHHHHHh
Confidence 46799999999988876653
No 142
>PRK14431 acylphosphatase; Provisional
Probab=29.89 E-value=1.5e+02 Score=19.74 Aligned_cols=26 Identities=8% Similarity=-0.125 Sum_probs=20.9
Q ss_pred eCCCCE--EEEcCHHHHHHHHHHHHhcC
Q 027514 174 LCPGNY--AVSGGVKGIEAVEAKAKSFK 199 (222)
Q Consensus 174 ns~~~~--visG~~~~l~~l~~~l~~~~ 199 (222)
|.++.+ .+.|+++.|+++...|++..
T Consensus 36 N~~dgVei~~qG~~~~l~~f~~~l~~g~ 63 (89)
T PRK14431 36 NVDDYVEIYAQGDDADLERFIQGVIEGA 63 (89)
T ss_pred ECCCcEEEEEEcCHHHHHHHHHHHhcCC
Confidence 555544 67899999999999999865
No 143
>PLN03090 auxin-responsive family protein; Provisional
Probab=29.80 E-value=71 Score=22.18 Aligned_cols=21 Identities=29% Similarity=0.501 Sum_probs=18.7
Q ss_pred hhccHHHHHHHHHHHHHcCCC
Q 027514 26 AQSVPAAAELYKKANDILGFD 46 (222)
Q Consensus 26 ~~~~p~~~~~~~~~~~~lg~~ 46 (222)
|.++|.|++.++.+.+-+|++
T Consensus 62 ~L~hP~F~~LL~~aeeEfGf~ 82 (104)
T PLN03090 62 FLTHPEFQSLLQQAEEEFGFD 82 (104)
T ss_pred HcCCHHHHHHHHHHHHHhCCC
Confidence 678999999999999888875
No 144
>PRK14450 acylphosphatase; Provisional
Probab=29.65 E-value=1.4e+02 Score=19.87 Aligned_cols=20 Identities=10% Similarity=-0.021 Sum_probs=17.3
Q ss_pred EEEEcCHHHHHHHHHHHHhc
Q 027514 179 YAVSGGVKGIEAVEAKAKSF 198 (222)
Q Consensus 179 ~visG~~~~l~~l~~~l~~~ 198 (222)
+.+.|++++++.|.+.|++.
T Consensus 45 i~~~G~~~~v~~f~~~l~~g 64 (91)
T PRK14450 45 VVAEGDKDSLLEFLDLLRSG 64 (91)
T ss_pred EEEEeCHHHHHHHHHHHhhC
Confidence 36899999999999999853
No 145
>PLN00021 chlorophyllase
Probab=28.71 E-value=38 Score=28.39 Aligned_cols=20 Identities=35% Similarity=0.172 Sum_probs=16.5
Q ss_pred cEEeeccHHHHHHHHHhccC
Q 027514 94 DVTCGLSLGEYTALAFAGAF 113 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~~aG~~ 113 (222)
-.++|||+|-..|+.++...
T Consensus 128 v~l~GHS~GG~iA~~lA~~~ 147 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGK 147 (313)
T ss_pred eEEEEECcchHHHHHHHhhc
Confidence 48999999999988877543
No 146
>PLN03220 uncharacterized protein; Provisional
Probab=28.56 E-value=65 Score=22.36 Aligned_cols=21 Identities=24% Similarity=0.485 Sum_probs=18.9
Q ss_pred hhccHHHHHHHHHHHHHcCCC
Q 027514 26 AQSVPAAAELYKKANDILGFD 46 (222)
Q Consensus 26 ~~~~p~~~~~~~~~~~~lg~~ 46 (222)
|.++|.|++.++++.+-+|++
T Consensus 61 yL~hP~F~~LL~~AeEEfGf~ 81 (105)
T PLN03220 61 FLNHPSFKEFLSRAEEEFGFN 81 (105)
T ss_pred HcCChHHHHHHHHHHHHhCCC
Confidence 678999999999999988875
No 147
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=28.23 E-value=48 Score=28.64 Aligned_cols=15 Identities=40% Similarity=0.297 Sum_probs=12.4
Q ss_pred cEEeeccHHHHHHHH
Q 027514 94 DVTCGLSLGEYTALA 108 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~ 108 (222)
-.++|||+|--+++.
T Consensus 230 i~~~GHSFGGATa~~ 244 (379)
T PF03403_consen 230 IGLAGHSFGGATALQ 244 (379)
T ss_dssp EEEEEETHHHHHHHH
T ss_pred eeeeecCchHHHHHH
Confidence 378999999888773
No 148
>PLN02454 triacylglycerol lipase
Probab=28.23 E-value=48 Score=29.02 Aligned_cols=17 Identities=41% Similarity=0.239 Sum_probs=12.4
Q ss_pred cEEeeccHHHHHHHHHh
Q 027514 94 DVTCGLSLGEYTALAFA 110 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~~a 110 (222)
-.+.|||+|---|..+|
T Consensus 230 I~vTGHSLGGALAtLaA 246 (414)
T PLN02454 230 IVLTGHSLGASLATLAA 246 (414)
T ss_pred EEEEecCHHHHHHHHHH
Confidence 36899999976655544
No 149
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=28.15 E-value=67 Score=25.63 Aligned_cols=28 Identities=29% Similarity=0.425 Sum_probs=20.9
Q ss_pred HHHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 77 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 77 ~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
.+.+++. | .-|.++|.|+|..-+++.+|
T Consensus 96 ~~~i~en--G-----PFDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 96 EDYIKEN--G-----PFDGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHh--C-----CCccccccchhHHHHHHhhc
Confidence 3456666 5 45899999999877777666
No 150
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.95 E-value=46 Score=31.71 Aligned_cols=18 Identities=28% Similarity=0.220 Sum_probs=15.1
Q ss_pred cEEeeccHHHHHHHHHhc
Q 027514 94 DVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~~aG 111 (222)
.+++|||+|-+.|-+..-
T Consensus 184 VILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 184 VILVGHSMGGIVARATLT 201 (973)
T ss_pred EEEEeccchhHHHHHHHh
Confidence 588999999999887653
No 151
>PLN00215 predicted protein; Provisional
Probab=27.73 E-value=16 Score=23.91 Aligned_cols=15 Identities=27% Similarity=0.120 Sum_probs=11.5
Q ss_pred CcEEEEEcCcccchH
Q 027514 6 SLLLFYVLSQGAQAV 20 (222)
Q Consensus 6 ~~~~~~F~GqG~~~~ 20 (222)
...+-+.||||.||.
T Consensus 52 rsaakmipgqggqwv 66 (110)
T PLN00215 52 RSAAKMIPGQGGQWV 66 (110)
T ss_pred hhhhhccCCCCCeEE
Confidence 345568999999985
No 152
>COG3607 Predicted lactoylglutathione lyase [General function prediction only]
Probab=27.60 E-value=1e+02 Score=22.21 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=28.0
Q ss_pred EEEEeeCCCCEEEE---cCHHHHHHHHHHHHhcCCCceE
Q 027514 169 QIANYLCPGNYAVS---GGVKGIEAVEAKAKSFKARMTV 204 (222)
Q Consensus 169 ~ia~~ns~~~~vis---G~~~~l~~l~~~l~~~~~~~~~ 204 (222)
.|+-.+.++++.|| |.+++++++++...+.|.+...
T Consensus 63 ~i~dt~~s~evli~ls~~s~eevd~~v~ka~eaGGk~~~ 101 (133)
T COG3607 63 QIADTTKSREVLISLSAGSREEVDELVDKALEAGGKPAN 101 (133)
T ss_pred ccccccCCceEEEEeccCcHHHHHHHHHHHHHcCCCCCC
Confidence 45566677777776 8899999999999999884433
No 153
>PLN02442 S-formylglutathione hydrolase
Probab=27.42 E-value=81 Score=25.77 Aligned_cols=20 Identities=30% Similarity=0.187 Sum_probs=15.4
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
+.-+++|||+|-+.|+.++-
T Consensus 143 ~~~~i~G~S~GG~~a~~~a~ 162 (283)
T PLN02442 143 SRASIFGHSMGGHGALTIYL 162 (283)
T ss_pred CceEEEEEChhHHHHHHHHH
Confidence 44589999999888776553
No 154
>PLN03219 uncharacterized protein; Provisional
Probab=26.95 E-value=71 Score=22.31 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=18.9
Q ss_pred hhccHHHHHHHHHHHHHcCCC
Q 027514 26 AQSVPAAAELYKKANDILGFD 46 (222)
Q Consensus 26 ~~~~p~~~~~~~~~~~~lg~~ 46 (222)
|..+|.|++.++++.+-+|++
T Consensus 63 yL~hP~F~~LL~~AeEEfGf~ 83 (108)
T PLN03219 63 YLNHPLFREFLNRAEEECGFH 83 (108)
T ss_pred HcCChHHHHHHHHHHHHhCCC
Confidence 678999999999999988875
No 155
>PLN02511 hydrolase
Probab=26.93 E-value=94 Score=26.77 Aligned_cols=18 Identities=22% Similarity=0.316 Sum_probs=14.0
Q ss_pred CccEEeeccHHHHHHHHH
Q 027514 92 SVDVTCGLSLGEYTALAF 109 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~ 109 (222)
.|-.++|||+|-..++..
T Consensus 173 ~~~~lvG~SlGg~i~~~y 190 (388)
T PLN02511 173 ANLYAAGWSLGANILVNY 190 (388)
T ss_pred CCEEEEEechhHHHHHHH
Confidence 467899999998666644
No 156
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=26.73 E-value=89 Score=26.86 Aligned_cols=39 Identities=18% Similarity=0.352 Sum_probs=32.3
Q ss_pred ceEEEcCCCHHHHHHHHHHhcccCCCCCcEEEEEeeCCC
Q 027514 139 AMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPG 177 (222)
Q Consensus 139 ~m~av~~~~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~ 177 (222)
.|....|++.++++.+.+++.-.++..+|+.+|..|+.+
T Consensus 373 GMF~fTgl~peQv~~l~ke~~iYmT~dGRiS~aG~ss~n 411 (427)
T KOG1411|consen 373 GMFCFTGLNPEQVDWLTKEYHIYLTKDGRISMAGLSSSN 411 (427)
T ss_pred heeeecCCCHHHHHHHHhhheeeeccCceEeeccccccC
Confidence 589999999999999999887555557788888887765
No 157
>PF04940 BLUF: Sensors of blue-light using FAD; InterPro: IPR007024 An FAD-binding domain, BLUF, exemplified by the N terminus of the AppA protein, (Q53119 from SWISSPROT), from Rhodobacter sphaeroides, is present in various proteins, primarily from Bacteria. The BLUF domain is involved in sensing blue-light (and possibly redox) using FAD and is similar to the flavin-binding PAS domains and cryptochromes. The predicted secondary structure reveals that the BLUF domain is a novel FAD-binding fold [].; PDB: 2IYG_A 2IYI_B 1X0P_A 2HFN_G 3MZI_A 2HFO_E 3GFZ_A 3GG1_B 2KB2_A 3GFY_A ....
Probab=25.13 E-value=1.1e+02 Score=20.51 Aligned_cols=55 Identities=9% Similarity=0.148 Sum_probs=34.4
Q ss_pred cCCCHHHHHHHHHHhcccCCCCCcE-EEEEeeCCCCE-EEEcCHHHHHHHHHHHHhcC
Q 027514 144 IGLDSDKVQQLCDAANQEVDEDNKV-QIANYLCPGNY-AVSGGVKGIEAVEAKAKSFK 199 (222)
Q Consensus 144 ~~~~~~~~~~~l~~~~~~~~~~~~~-~ia~~ns~~~~-visG~~~~l~~l~~~l~~~~ 199 (222)
.+++.+++.+++........ ...+ -+=.++...-+ ++=|+++.|+.+.+.+.+..
T Consensus 12 ~~~~~~~~~~Il~~s~~~N~-~~~iTG~Ll~~~~~F~Q~LEG~~~~v~~l~~rI~~D~ 68 (93)
T PF04940_consen 12 EDLSPEDLADILRSSRRNNR-RHGITGFLLYDGGHFFQVLEGPEEAVDALFERIKQDP 68 (93)
T ss_dssp TTS-HHHHHHHHHHHHHHHH-HHTEEEEEEEETTEEEEEEEEEHHHHHHHHHHHHT-T
T ss_pred CCCCHHHHHHHHHHHHHhhh-hcCCEEEEEEeCCEEEEEEECCHHHHHHHHHHHhcCC
Confidence 36778888888877653211 1122 23334444433 89999999999999988654
No 158
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=25.01 E-value=72 Score=27.64 Aligned_cols=48 Identities=23% Similarity=0.378 Sum_probs=30.5
Q ss_pred CCceEEEcCCCHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcC-HHHHHHHHHHH
Q 027514 137 KGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGG-VKGIEAVEAKA 195 (222)
Q Consensus 137 ~g~m~av~~~~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~-~~~l~~l~~~l 195 (222)
...|....|++.+++..+-+++. +|+.. .+.+-|+|- .+.++.+.+.+
T Consensus 344 Q~GMFsy~Gls~~QV~rLree~~--------IY~v~---sGRi~vaGl~~~ni~~va~ai 392 (396)
T COG1448 344 QRGMFSYTGLSPEQVDRLREEFG--------IYLVA---SGRINVAGLNTSNIDYVAKAI 392 (396)
T ss_pred cCceeecCCCCHHHHHHHHHhcc--------EEEec---CCeeeeccCChhhHHHHHHHH
Confidence 35699999999999999988764 44333 223444444 34555555443
No 159
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=24.80 E-value=53 Score=26.90 Aligned_cols=17 Identities=29% Similarity=0.255 Sum_probs=12.7
Q ss_pred CccEEeeccHHHHHHHH
Q 027514 92 SVDVTCGLSLGEYTALA 108 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~ 108 (222)
++..++|||+|-+-.+.
T Consensus 137 ~~~~i~GhSlGGLfvl~ 153 (264)
T COG2819 137 ERTAIIGHSLGGLFVLF 153 (264)
T ss_pred ccceeeeecchhHHHHH
Confidence 45799999999655444
No 160
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=24.73 E-value=62 Score=26.23 Aligned_cols=18 Identities=6% Similarity=-0.090 Sum_probs=14.4
Q ss_pred cCHHHHHHHHHHHHhcCC
Q 027514 183 GGVKGIEAVEAKAKSFKA 200 (222)
Q Consensus 183 G~~~~l~~l~~~l~~~~~ 200 (222)
+++.+.++|........+
T Consensus 230 ~P~As~d~f~~~y~nApl 247 (281)
T COG4757 230 APPASRDAFASFYRNAPL 247 (281)
T ss_pred CCHHHHHHHHHhhhcCcc
Confidence 788889999888776655
No 161
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=24.66 E-value=59 Score=28.44 Aligned_cols=16 Identities=38% Similarity=0.457 Sum_probs=14.8
Q ss_pred EEeeccHHHHHHHHHh
Q 027514 95 VTCGLSLGEYTALAFA 110 (222)
Q Consensus 95 ~~~G~S~Ge~~A~~~a 110 (222)
+++|+|+|-+.|++++
T Consensus 291 ~IaG~S~GGl~AL~~a 306 (411)
T PRK10439 291 VVAGQSFGGLAALYAG 306 (411)
T ss_pred EEEEEChHHHHHHHHH
Confidence 7999999999999876
No 162
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=24.50 E-value=64 Score=26.15 Aligned_cols=20 Identities=30% Similarity=0.209 Sum_probs=16.3
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
+.-+++|||+|-+.|+.++.
T Consensus 138 ~~~~~~G~S~GG~~a~~~a~ 157 (275)
T TIGR02821 138 ERQGITGHSMGGHGALVIAL 157 (275)
T ss_pred CceEEEEEChhHHHHHHHHH
Confidence 45689999999988887764
No 163
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=24.17 E-value=75 Score=25.90 Aligned_cols=30 Identities=30% Similarity=0.343 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhcCC-CCcccCccEEeeccHHHHHHH
Q 027514 73 SLAAVELLRARDGG-QQIIDSVDVTCGLSLGEYTAL 107 (222)
Q Consensus 73 ~~a~~~~l~~~~~g-i~~~~~p~~~~G~S~Ge~~A~ 107 (222)
--|.++.|++.+ | . ++-.+.|+|+|.-+..
T Consensus 115 i~avye~Lr~~~-g~~----~~Iil~G~SiGt~~tv 145 (258)
T KOG1552|consen 115 IKAVYEWLRNRY-GSP----ERIILYGQSIGTVPTV 145 (258)
T ss_pred HHHHHHHHHhhc-CCC----ceEEEEEecCCchhhh
Confidence 456788888886 4 4 7779999999976633
No 164
>PRK14445 acylphosphatase; Provisional
Probab=24.13 E-value=1.2e+02 Score=20.16 Aligned_cols=19 Identities=16% Similarity=0.200 Sum_probs=17.1
Q ss_pred EEEEcCHHHHHHHHHHHHh
Q 027514 179 YAVSGGVKGIEAVEAKAKS 197 (222)
Q Consensus 179 ~visG~~~~l~~l~~~l~~ 197 (222)
+.+.|+.+.|++|.+.|++
T Consensus 46 i~~qG~~~~l~~f~~~l~~ 64 (91)
T PRK14445 46 IEAQGSSGMIDELIKQAER 64 (91)
T ss_pred EEEEECHHHHHHHHHHHHh
Confidence 5778999999999999984
No 165
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=24.05 E-value=1.1e+02 Score=26.75 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=20.7
Q ss_pred HHHHHHHHhcCCCCcccCccEEeeccHHHHHHHHHh
Q 027514 75 AAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 75 a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (222)
++.+.+.+.. .+. ...-+++|||+|-+.|+.++
T Consensus 251 avld~l~~~~-~vd--~~ri~l~G~S~GG~~Al~~A 283 (414)
T PRK05077 251 AVLNALPNVP-WVD--HTRVAAFGFRFGANVAVRLA 283 (414)
T ss_pred HHHHHHHhCc-ccC--cccEEEEEEChHHHHHHHHH
Confidence 4556665542 220 03458999999988877654
No 166
>PLN02571 triacylglycerol lipase
Probab=24.03 E-value=61 Score=28.43 Aligned_cols=16 Identities=38% Similarity=0.374 Sum_probs=11.4
Q ss_pred cEEeeccHHHHHHHHH
Q 027514 94 DVTCGLSLGEYTALAF 109 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~~ 109 (222)
-.+.|||+|---|..+
T Consensus 228 I~VTGHSLGGALAtLa 243 (413)
T PLN02571 228 ITICGHSLGAALATLN 243 (413)
T ss_pred EEEeccchHHHHHHHH
Confidence 4789999996544443
No 167
>PRK14435 acylphosphatase; Provisional
Probab=24.00 E-value=2e+02 Score=19.10 Aligned_cols=25 Identities=4% Similarity=0.019 Sum_probs=19.6
Q ss_pred eeCCCC---EEEEcCHHHHHHHHHHHHh
Q 027514 173 YLCPGN---YAVSGGVKGIEAVEAKAKS 197 (222)
Q Consensus 173 ~ns~~~---~visG~~~~l~~l~~~l~~ 197 (222)
.|.++. +.+.|+.+.+++|.+.|.+
T Consensus 35 ~N~~dG~Vei~~~G~~~~i~~f~~~l~~ 62 (90)
T PRK14435 35 MNMDDGSVFIHAEGDENALRRFLNEVAK 62 (90)
T ss_pred EECCCCCEEEEEEECHHHHHHHHHHHhh
Confidence 354443 4778999999999999984
No 168
>PRK14428 acylphosphatase; Provisional
Probab=23.56 E-value=1.8e+02 Score=19.80 Aligned_cols=24 Identities=13% Similarity=0.288 Sum_probs=19.4
Q ss_pred eCCCC---EEEEcCHHHHHHHHHHHHh
Q 027514 174 LCPGN---YAVSGGVKGIEAVEAKAKS 197 (222)
Q Consensus 174 ns~~~---~visG~~~~l~~l~~~l~~ 197 (222)
|.++- +.+.|+++.+++|.+.|++
T Consensus 42 N~~dGsVei~~qG~~~~i~~fi~~l~~ 68 (97)
T PRK14428 42 NCRDGSVELEAQGSSDAVQALVEQLAI 68 (97)
T ss_pred ECCCCEEEEEEEcCHHHHHHHHHHHhh
Confidence 55544 4778999999999999984
No 169
>PRK14433 acylphosphatase; Provisional
Probab=23.46 E-value=1.5e+02 Score=19.59 Aligned_cols=20 Identities=10% Similarity=0.018 Sum_probs=17.5
Q ss_pred EEEEcCHHHHHHHHHHHHhc
Q 027514 179 YAVSGGVKGIEAVEAKAKSF 198 (222)
Q Consensus 179 ~visG~~~~l~~l~~~l~~~ 198 (222)
+.+.|+.+.+++|.+.+++.
T Consensus 43 i~~~G~~~~i~~f~~~l~~g 62 (87)
T PRK14433 43 VVAEGPKEALERLLHWLRRG 62 (87)
T ss_pred EEEEECHHHHHHHHHHHhhC
Confidence 57889999999999999843
No 170
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=23.02 E-value=31 Score=29.16 Aligned_cols=19 Identities=26% Similarity=0.349 Sum_probs=15.2
Q ss_pred cEEeeccHHHHHHHHHhcc
Q 027514 94 DVTCGLSLGEYTALAFAGA 112 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~~aG~ 112 (222)
.+++|||+|--++...++.
T Consensus 243 ~aViGHSFGgAT~i~~ss~ 261 (399)
T KOG3847|consen 243 AAVIGHSFGGATSIASSSS 261 (399)
T ss_pred hhheeccccchhhhhhhcc
Confidence 4789999998888777663
No 171
>PRK15339 type III secretion system outer membrane pore InvG; Provisional
Probab=22.70 E-value=2.8e+02 Score=25.44 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=41.2
Q ss_pred CceEEEcCCCHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHH
Q 027514 138 GAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAK 196 (222)
Q Consensus 138 g~m~av~~~~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~ 196 (222)
..++.+...+.+++..+|....-. ..+..+......+.+.|+||+.-++.+.+..+
T Consensus 108 s~~i~l~~~s~~~l~~~L~~~gl~---D~r~~~r~~~~~~~v~VsGPp~yvelV~~~a~ 163 (559)
T PRK15339 108 NAVVSLRNVSLNEFNNFLKRSGLY---NKRYPLRGDNRKGTFYVSGPPVYVDLVVNAAT 163 (559)
T ss_pred EEEEecCCCCHHHHHHHHHHcCCc---CCCCceeECCCCCEEEEECCHHHHHHHHHHHH
Confidence 345666678889999999886532 34677777666788899999987777665555
No 172
>cd06214 PA_degradation_oxidoreductase_like NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase. PA oxidoreductases of E. coli hydroxylate PA-CoA in the second step of PA degradation. Members of this group typically fuse a ferredoxin reductase-like domain with an iron-sulfur binding cluster domain. Ferredoxins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal portion may contain a flavin prosthetic group, as in flavoenzymes, or use flavin as a substrate. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and
Probab=22.66 E-value=1.2e+02 Score=23.80 Aligned_cols=25 Identities=20% Similarity=0.110 Sum_probs=22.4
Q ss_pred CCCEEEEcCHHHHHHHHHHHHhcCC
Q 027514 176 PGNYAVSGGVKGIEAVEAKAKSFKA 200 (222)
Q Consensus 176 ~~~~visG~~~~l~~l~~~l~~~~~ 200 (222)
...+.+||++.-++.+.+.+++.|+
T Consensus 206 ~~~v~icGp~~mv~~v~~~l~~~G~ 230 (241)
T cd06214 206 FDEAFLCGPEPMMDAVEAALLELGV 230 (241)
T ss_pred CcEEEEECCHHHHHHHHHHHHHcCC
Confidence 4578999999999999999998887
No 173
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=22.61 E-value=1.1e+02 Score=24.89 Aligned_cols=39 Identities=21% Similarity=0.062 Sum_probs=20.5
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCCCcccCccEEeeccHHHH
Q 027514 64 ISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEY 104 (222)
Q Consensus 64 ~~~~~i~~~~~a~~~~l~~~~~gi~~~~~p~~~~G~S~Ge~ 104 (222)
.+.-....+.-++ +.+.+.. +.....-|.+-+|||+|-.
T Consensus 64 ~A~~~~~~f~~~~-~~L~~~~-~~~~~~lP~~~vGHSlGck 102 (250)
T PF07082_consen 64 IAREVWERFERCL-RALQKRG-GLDPAYLPVYGVGHSLGCK 102 (250)
T ss_pred HHHHHHHHHHHHH-HHHHHhc-CCCcccCCeeeeecccchH
Confidence 3333444445444 3444432 4321224678899999953
No 174
>PRK14444 acylphosphatase; Provisional
Probab=22.44 E-value=2.4e+02 Score=18.88 Aligned_cols=21 Identities=10% Similarity=0.007 Sum_probs=17.9
Q ss_pred CEEEEcCHHHHHHHHHHHHhc
Q 027514 178 NYAVSGGVKGIEAVEAKAKSF 198 (222)
Q Consensus 178 ~~visG~~~~l~~l~~~l~~~ 198 (222)
.+.+.|+.+.++.|.+.+++.
T Consensus 45 ei~~qG~~~~i~~f~~~l~~g 65 (92)
T PRK14444 45 EAVFEGSRPAVQKMISWCYSG 65 (92)
T ss_pred EEEEEcCHHHHHHHHHHHHhC
Confidence 457889999999999999843
No 175
>PRK14430 acylphosphatase; Provisional
Probab=22.37 E-value=1.7e+02 Score=19.68 Aligned_cols=21 Identities=29% Similarity=0.292 Sum_probs=17.7
Q ss_pred CEEEEcCHHHHHHHHHHHHhc
Q 027514 178 NYAVSGGVKGIEAVEAKAKSF 198 (222)
Q Consensus 178 ~~visG~~~~l~~l~~~l~~~ 198 (222)
.+.+.|+.+.++.|...|+..
T Consensus 45 ei~~qG~~~~i~~f~~~l~~g 65 (92)
T PRK14430 45 EVMASGTVRQLEALRAWMEAG 65 (92)
T ss_pred EEEEEcCHHHHHHHHHHHHhC
Confidence 357889999999999999653
No 176
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=22.26 E-value=72 Score=24.49 Aligned_cols=19 Identities=32% Similarity=0.188 Sum_probs=15.0
Q ss_pred CccEEeeccHHHHHHHHHh
Q 027514 92 SVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (222)
.|.++++||+|-.+++-.+
T Consensus 59 ~~~vlVAHSLGc~~v~h~~ 77 (181)
T COG3545 59 GPVVLVAHSLGCATVAHWA 77 (181)
T ss_pred CCeEEEEecccHHHHHHHH
Confidence 7789999999977766543
No 177
>PLN02847 triacylglycerol lipase
Probab=22.12 E-value=67 Score=29.64 Aligned_cols=16 Identities=38% Similarity=0.324 Sum_probs=12.7
Q ss_pred EEeeccHHHHHHHHHh
Q 027514 95 VTCGLSLGEYTALAFA 110 (222)
Q Consensus 95 ~~~G~S~Ge~~A~~~a 110 (222)
.++|||+|-=.|+.++
T Consensus 254 VITGHSLGGGVAALLA 269 (633)
T PLN02847 254 KIVGHSLGGGTAALLT 269 (633)
T ss_pred EEeccChHHHHHHHHH
Confidence 6899999977766654
No 178
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Biotin-apoprotein ligase modifies proteins by covalently attaching biotin. ScBLP is known to biotinylate acety-CoA carboxylase and pyruvate carboxylase. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, the Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in a typical GATase1 domain is conserved.
Probab=21.99 E-value=57 Score=23.02 Aligned_cols=39 Identities=15% Similarity=0.132 Sum_probs=23.9
Q ss_pred EEEEEcCcccchHHhhHh-hhccHHHHHHHHHHHHHcCCCh
Q 027514 8 LLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDL 47 (222)
Q Consensus 8 ~~~~F~GqG~~~~~~~~~-~~~~p~~~~~~~~~~~~lg~~l 47 (222)
-.++||| |+....|... -.....+++++++--.+||+-+
T Consensus 46 d~lVlPG-Ga~~~~~~~L~~~g~~~i~~~v~~g~p~LGICl 85 (114)
T cd03144 46 ALLVVPG-GADLPYCRALNGKGNRRIRNFVRNGGNYLGICA 85 (114)
T ss_pred CEEEECC-CChHHHHHHHHhhCcHHHHHHHHCCCcEEEEec
Confidence 4789999 9988877654 2225556666543334455443
No 179
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=21.88 E-value=1.6e+02 Score=22.77 Aligned_cols=17 Identities=35% Similarity=0.288 Sum_probs=14.2
Q ss_pred cEEeeccHHHHHHHHHh
Q 027514 94 DVTCGLSLGEYTALAFA 110 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~~a 110 (222)
-++.|.|+|-..|+..+
T Consensus 107 i~l~GFSQGa~~al~~~ 123 (216)
T PF02230_consen 107 IFLGGFSQGAAMALYLA 123 (216)
T ss_dssp EEEEEETHHHHHHHHHH
T ss_pred eehhhhhhHHHHHHHHH
Confidence 48999999988887765
No 180
>PRK14438 acylphosphatase; Provisional
Probab=21.87 E-value=1.5e+02 Score=19.81 Aligned_cols=24 Identities=13% Similarity=0.093 Sum_probs=19.2
Q ss_pred eCCCC---EEEEcCHHHHHHHHHHHHh
Q 027514 174 LCPGN---YAVSGGVKGIEAVEAKAKS 197 (222)
Q Consensus 174 ns~~~---~visG~~~~l~~l~~~l~~ 197 (222)
|.++- +++.|+++.|+++.+.|++
T Consensus 37 N~~dG~Vei~~qG~~~~i~~f~~~l~~ 63 (91)
T PRK14438 37 NLPNGSVQGCFEGEETDVAALIDWCHH 63 (91)
T ss_pred ECCCCEEEEEEEECHHHHHHHHHHHhh
Confidence 54544 4678999999999999984
No 181
>TIGR02517 type_II_gspD general secretion pathway protein D. In Gram-negative bacteria, proteins that have first crossed the inner member by Sec-dependent protein transport can be exported across the outer membrane by type II secretion, also called the main terminal branch of the general secretion pathway. Members of this family are general secretion pathway protein D. In Yersinia enterocolitica, a second member of this family is part of a novel second type II secretion system specifically associated with virulence (See PubMed:12654803). This family is closely homologous to the type IV pilus outer membrane secretin PilQ (TIGR02515) and to the type III secretion system pore YscC/HrcC (TIGR02516).
Probab=21.82 E-value=4.1e+02 Score=24.40 Aligned_cols=56 Identities=9% Similarity=0.134 Sum_probs=42.3
Q ss_pred eEEEcCCCHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCC
Q 027514 140 MVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKA 200 (222)
Q Consensus 140 m~av~~~~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~ 200 (222)
++-+...+.+++.+.|+.+- ..+..+......+..+|.|+++.++++.+.++..+.
T Consensus 101 vi~L~~~~a~~v~~~L~~ll-----s~~~~v~~d~~~N~liv~~~~~~l~~i~~li~~lD~ 156 (594)
T TIGR02517 101 VFPLRNISASELVPVLRPLV-----SPNGDVAAYPPTNTIVVTDYASNINRVARIIQQLDV 156 (594)
T ss_pred EEEeccCCHHHHHHHHHHhc-----CCCceEEEcCCCCEEEEEcCHHHHHHHHHHHHHhcc
Confidence 44455678899999988763 223456777777889999999999888888777654
No 182
>PF08026 Antimicrobial_5: Bee antimicrobial peptide; InterPro: IPR012524 This entry represents antimicrobial peptides produced by bees. These peptides have strong antimicrobial and some anti-fungal activity and has homology to abaecin which is the largest proline-rich antimicrobial peptide isolated from European bumblebee Bombus pascuorum [].; GO: 0042381 hemolymph coagulation, 0005576 extracellular region
Probab=21.68 E-value=31 Score=18.73 Aligned_cols=13 Identities=15% Similarity=-0.028 Sum_probs=9.2
Q ss_pred EEEcCcccchHHh
Q 027514 10 FYVLSQGAQAVGM 22 (222)
Q Consensus 10 ~~F~GqG~~~~~~ 22 (222)
=.|||||...++.
T Consensus 16 PTFPGqGP~NPKi 28 (39)
T PF08026_consen 16 PTFPGQGPFNPKI 28 (39)
T ss_pred CcCCCCCCCCccc
Confidence 3699999865543
No 183
>PRK14446 acylphosphatase; Provisional
Probab=21.51 E-value=2.2e+02 Score=18.90 Aligned_cols=25 Identities=20% Similarity=0.130 Sum_probs=19.9
Q ss_pred eeCCCC---EEEEcCHHHHHHHHHHHHh
Q 027514 173 YLCPGN---YAVSGGVKGIEAVEAKAKS 197 (222)
Q Consensus 173 ~ns~~~---~visG~~~~l~~l~~~l~~ 197 (222)
.|.++- +.+.|+.+.++.+.+.|++
T Consensus 35 ~N~~dGsVei~~qG~~~~l~~f~~~l~~ 62 (88)
T PRK14446 35 RNQADGSVEVVAAGSAAALEALEAWLWQ 62 (88)
T ss_pred EECCCCCEEEEEEeCHHHHHHHHHHHhh
Confidence 355555 4678999999999999994
No 184
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=21.48 E-value=4e+02 Score=20.74 Aligned_cols=24 Identities=25% Similarity=0.048 Sum_probs=17.4
Q ss_pred CccEEeeccHHHHHHHHHhccCCH
Q 027514 92 SVDVTCGLSLGEYTALAFAGAFSF 115 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG~~~~ 115 (222)
.|-.++|||+|-+.+-++-+.+..
T Consensus 78 ~~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred ccceEEEecccHHHHHHHHHHhhh
Confidence 355799999998877776654443
No 185
>PRK14421 acylphosphatase; Provisional
Probab=21.42 E-value=2.1e+02 Score=19.51 Aligned_cols=19 Identities=11% Similarity=0.247 Sum_probs=17.0
Q ss_pred EEEEcCHHHHHHHHHHHHh
Q 027514 179 YAVSGGVKGIEAVEAKAKS 197 (222)
Q Consensus 179 ~visG~~~~l~~l~~~l~~ 197 (222)
+.+.|+.+.+++|.+.+++
T Consensus 46 i~~~G~~~~i~~f~~~l~~ 64 (99)
T PRK14421 46 ALFAGPADAVAEMIARCRR 64 (99)
T ss_pred EEEeCCHHHHHHHHHHHHh
Confidence 4778999999999999984
No 186
>PRK10560 hofQ outer membrane porin HofQ; Provisional
Probab=21.38 E-value=2.9e+02 Score=23.85 Aligned_cols=51 Identities=8% Similarity=0.019 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcCC
Q 027514 145 GLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKA 200 (222)
Q Consensus 145 ~~~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~ 200 (222)
-.+.+++.+.++..- ..+..+......+..+|.|.++.++++.+.+++.+.
T Consensus 100 ya~A~el~~~l~~ll-----~~~g~v~~d~~tNsLiv~~~~~~~~~i~~li~~lD~ 150 (386)
T PRK10560 100 YADAGELAKAGEKLL-----SAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDL 150 (386)
T ss_pred CCCHHHHHhhhcccc-----cCCcEEEEEcCCCEEEEEcCHHHHHHHHHHHHHhCC
Confidence 456677776665432 223557777788889999999999999999998765
No 187
>PRK14423 acylphosphatase; Provisional
Probab=21.37 E-value=2.3e+02 Score=18.87 Aligned_cols=21 Identities=14% Similarity=0.074 Sum_probs=17.7
Q ss_pred CEEEEcCHHHHHHHHHHHHhc
Q 027514 178 NYAVSGGVKGIEAVEAKAKSF 198 (222)
Q Consensus 178 ~~visG~~~~l~~l~~~l~~~ 198 (222)
.+.+.|+.+.++.+.+.|++.
T Consensus 46 ei~~~G~~~~i~~f~~~l~~g 66 (92)
T PRK14423 46 EAVFEGPRDAVEAMVEWCHEG 66 (92)
T ss_pred EEEEEECHHHHHHHHHHHHhC
Confidence 357789999999999999953
No 188
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=21.29 E-value=4.3e+02 Score=22.63 Aligned_cols=88 Identities=19% Similarity=0.187 Sum_probs=41.4
Q ss_pred CCcEEEEEcCc-ccchHHhhHhhhccHHHHHHHHHHHHHcCCChHHHhhcCC-CccccCccchhhHHHHHHHH-HHHHHH
Q 027514 5 RSLLLFYVLSQ-GAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGP-KEKLDSTIISQPAIYVTSLA-AVELLR 81 (222)
Q Consensus 5 ~~~~~~~F~Gq-G~~~~~~~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~-~~~~~~~~~~~~~i~~~~~a-~~~~l~ 81 (222)
+.+++++|.|- |+. +.|.+|...+.+.+ -||...=+-.++. .+....+..-....+ ..++ +.+.++
T Consensus 74 ~~P~vVl~HGL~G~s---------~s~y~r~L~~~~~~-rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t-~D~~~~l~~l~ 142 (345)
T COG0429 74 KKPLVVLFHGLEGSS---------NSPYARGLMRALSR-RGWLVVVFHFRGCSGEANTSPRLYHSGET-EDIRFFLDWLK 142 (345)
T ss_pred CCceEEEEeccCCCC---------cCHHHHHHHHHHHh-cCCeEEEEecccccCCcccCcceecccch-hHHHHHHHHHH
Confidence 44578888885 443 24555666555543 2333221111121 111112222222222 2222 234555
Q ss_pred HhcCCCCcccCccEEeeccHHH-HHHHH
Q 027514 82 ARDGGQQIIDSVDVTCGLSLGE-YTALA 108 (222)
Q Consensus 82 ~~~~gi~~~~~p~~~~G~S~Ge-~~A~~ 108 (222)
+.+ .- .|-.++|+|+|- +-|.+
T Consensus 143 ~~~-~~----r~~~avG~SLGgnmLa~y 165 (345)
T COG0429 143 ARF-PP----RPLYAVGFSLGGNMLANY 165 (345)
T ss_pred HhC-CC----CceEEEEecccHHHHHHH
Confidence 554 33 788999999997 44433
No 189
>PRK14447 acylphosphatase; Provisional
Probab=21.29 E-value=1.6e+02 Score=19.81 Aligned_cols=19 Identities=16% Similarity=0.092 Sum_probs=16.6
Q ss_pred EEEEcCHHHHHHHHHHHHh
Q 027514 179 YAVSGGVKGIEAVEAKAKS 197 (222)
Q Consensus 179 ~visG~~~~l~~l~~~l~~ 197 (222)
+++.|+++.|++|...|++
T Consensus 47 i~~qG~~~~l~~f~~~l~~ 65 (95)
T PRK14447 47 AVLEGPRDAVLKVIEWARV 65 (95)
T ss_pred EEEEeCHHHHHHHHHHHhh
Confidence 3568999999999999985
No 190
>COG0627 Predicted esterase [General function prediction only]
Probab=21.22 E-value=46 Score=28.04 Aligned_cols=18 Identities=39% Similarity=0.538 Sum_probs=15.2
Q ss_pred ccEEeeccHHHHHHHHHh
Q 027514 93 VDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 93 p~~~~G~S~Ge~~A~~~a 110 (222)
-.+++|||+|-+.|+..|
T Consensus 153 ~~aI~G~SMGG~GAl~lA 170 (316)
T COG0627 153 GRAIAGHSMGGYGALKLA 170 (316)
T ss_pred CceeEEEeccchhhhhhh
Confidence 458999999999998755
No 191
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=21.17 E-value=1.2e+02 Score=31.91 Aligned_cols=28 Identities=25% Similarity=0.216 Sum_probs=20.4
Q ss_pred HHHHHhcCCCCcccCccEEeeccHHHHHHHHHhc
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~aG 111 (222)
.++.+. ++ ++-.++|||+|-..|+..+.
T Consensus 1437 ~ll~~l--~~----~~v~LvGhSmGG~iAl~~A~ 1464 (1655)
T PLN02980 1437 KLIEHI--TP----GKVTLVGYSMGARIALYMAL 1464 (1655)
T ss_pred HHHHHh--CC----CCEEEEEECHHHHHHHHHHH
Confidence 344555 66 77789999999988876553
No 192
>cd06217 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap between the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form
Probab=21.07 E-value=1.3e+02 Score=23.37 Aligned_cols=25 Identities=16% Similarity=-0.000 Sum_probs=22.6
Q ss_pred CCCEEEEcCHHHHHHHHHHHHhcCC
Q 027514 176 PGNYAVSGGVKGIEAVEAKAKSFKA 200 (222)
Q Consensus 176 ~~~~visG~~~~l~~l~~~l~~~~~ 200 (222)
...+.|||++.-++.+.+.+++.|+
T Consensus 201 ~~~v~icGp~~m~~~v~~~l~~~Gv 225 (235)
T cd06217 201 GRRVYVCGPPAFVEAATRLLLELGV 225 (235)
T ss_pred CCEEEEECCHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999887
No 193
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=21.05 E-value=1.4e+02 Score=25.79 Aligned_cols=27 Identities=7% Similarity=-0.075 Sum_probs=19.0
Q ss_pred HHHHHhcCCCCcccCccEEeeccHHHHHHHHHh
Q 027514 78 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 78 ~~l~~~~~gi~~~~~p~~~~G~S~Ge~~A~~~a 110 (222)
.++.+. ++ ++..++|||+|-..|+..+
T Consensus 189 ~~i~~l--~~----~~~~LvG~s~GG~ia~~~a 215 (383)
T PLN03084 189 SLIDEL--KS----DKVSLVVQGYFSPPVVKYA 215 (383)
T ss_pred HHHHHh--CC----CCceEEEECHHHHHHHHHH
Confidence 445555 66 7778999999976665444
No 194
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=20.94 E-value=1.6e+02 Score=21.75 Aligned_cols=20 Identities=35% Similarity=0.182 Sum_probs=15.3
Q ss_pred CccEEeeccHHHHHHHHHhc
Q 027514 92 SVDVTCGLSLGEYTALAFAG 111 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~aG 111 (222)
.|-.++|||+|-..|...+.
T Consensus 64 ~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 64 RPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 67799999999877754443
No 195
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.79 E-value=90 Score=26.42 Aligned_cols=14 Identities=21% Similarity=0.076 Sum_probs=12.0
Q ss_pred CcEEEEEcCcccch
Q 027514 6 SLLLFYVLSQGAQA 19 (222)
Q Consensus 6 ~~~~~~F~GqG~~~ 19 (222)
+|-++-|||||.||
T Consensus 330 GkPvi~fPg~GPQy 343 (412)
T COG4370 330 GKPVIGFPGQGPQY 343 (412)
T ss_pred CCceeecCCCCCCc
Confidence 45688999999998
No 196
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=20.46 E-value=1.1e+02 Score=25.98 Aligned_cols=21 Identities=24% Similarity=-0.023 Sum_probs=16.1
Q ss_pred EEeeccHHHHHHHHHhccCCH
Q 027514 95 VTCGLSLGEYTALAFAGAFSF 115 (222)
Q Consensus 95 ~~~G~S~Ge~~A~~~aG~~~~ 115 (222)
.++|||+|.=.|.+++..+..
T Consensus 153 hlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 153 HLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp EEEEETCHHHHHHHHHHHTTT
T ss_pred EEEeeccchhhhhhhhhhccC
Confidence 789999998777777654443
No 197
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=20.41 E-value=3.7e+02 Score=21.44 Aligned_cols=64 Identities=11% Similarity=0.059 Sum_probs=44.1
Q ss_pred EcCCCHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcC--HHHHHHHHHHHHhcCCCceEEccccCCCCC
Q 027514 143 IIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGG--VKGIEAVEAKAKSFKARMTVISSFICIPIQ 214 (222)
Q Consensus 143 v~~~~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~--~~~l~~l~~~l~~~~~~~~~~L~~~~~p~H 214 (222)
+-|++.++++++-.. ++..+-++--|...++++|=. ...+.+..+.+++.|+ ....|=+. ..|+
T Consensus 35 LDgls~~eI~~~aP~------~ge~vLvTrL~DG~~V~ls~~~v~~~lq~~i~~le~~G~-d~illlCT-G~F~ 100 (221)
T PF07302_consen 35 LDGLSREEIAALAPE------PGEYVLVTRLRDGTQVVLSKKKVEPRLQACIAQLEAQGY-DVILLLCT-GEFP 100 (221)
T ss_pred CCCCCHHHHHHhCCC------CCCceeEEEeCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-CEEEEecc-CCCC
Confidence 347888888443221 144577777787888888866 3578888889999998 55666565 6666
No 198
>TIGR02516 type_III_yscC type III secretion outer membrane pore, YscC/HrcC family. A number of proteins homologous to the type IV pilus secretin PilQ (TIGR02515) are involved in type IV pilus formation, competence for transformation, type III secretion, and type II secretion (also called the main terminal branch of the general secretion pathway). The clade described by this model contains the outer membrane pore proteins of bacterial type III secretion systems, typified by YscC for animal pathogens and HrcC for plant pathogens.
Probab=20.37 E-value=3.3e+02 Score=24.19 Aligned_cols=56 Identities=18% Similarity=0.149 Sum_probs=40.7
Q ss_pred EEEcCCCHHHHHHHHHHhcccCCCCCcEEEEEeeCCCCEEEEcCHHHHHHHHHHHHhcC
Q 027514 141 VSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFK 199 (222)
Q Consensus 141 ~av~~~~~~~~~~~l~~~~~~~~~~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~ 199 (222)
+-+-..+.+++.++|...... ..+..|..+-..+.++|+|++..++.+.+.++..+
T Consensus 80 i~l~~~~a~~l~~~Lr~~~~~---~~~~~i~~~~~sn~l~vsg~~~~v~~v~~~i~~lD 135 (462)
T TIGR02516 80 ISPRPLAANELKKALRRSGLY---DPRFPWRGDPEEGTVYVSGPPAYIDLVRNAATALE 135 (462)
T ss_pred EecCCCCHHHHHHHHHHcCCC---CCCCceeEcCCCCEEEEECCHHHHHHHHHHHHHHh
Confidence 334456888999988874311 34577888888888999999998888777776443
No 199
>PF04405 ScdA_N: Domain of Unknown function (DUF542) ; InterPro: IPR007500 This is a domain of unknown function found at the N terminus of genes involved in cell wall development and nitrous oxide protection. ScdA is required for normal cell growth and development; mutants have an increased level of peptidoglycan cross-linking and aberrant cellular morphology suggesting a role for ScdA in cell wall metabolism []. NorA1, NorA2, and YtfE are involved in the nitrous oxide response. NorA1 and NorA2, which are similar to YtfE, are co-transcribed with the membrane-bound nitrous oxide (NO) reductases. The genes appear to be involved in NO protection but their function is unknown [, ].
Probab=20.27 E-value=2.2e+02 Score=17.22 Aligned_cols=15 Identities=20% Similarity=0.257 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHhcCCC
Q 027514 71 VTSLAAVELLRARDGGQ 87 (222)
Q Consensus 71 ~~~~a~~~~l~~~~~gi 87 (222)
+--....+++++. ||
T Consensus 10 ~~~p~~a~vf~~~--gI 24 (56)
T PF04405_consen 10 AEDPRAARVFRKY--GI 24 (56)
T ss_pred HHChHHHHHHHHc--CC
Confidence 3334556677776 66
No 200
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=20.23 E-value=2.3e+02 Score=24.96 Aligned_cols=107 Identities=15% Similarity=0.081 Sum_probs=67.0
Q ss_pred cEEeeccHH--HHHHHHHhccCCHHHHHHHHHHHH-HHHHHhhccCCCceEEEcCCCHHHHHHHHHHhcccCCCCCcEEE
Q 027514 94 DVTCGLSLG--EYTALAFAGAFSFEDGLKLVKLRG-AAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQI 170 (222)
Q Consensus 94 ~~~~G~S~G--e~~A~~~aG~~~~~~a~~~~~~r~-~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~~~~~~i 170 (222)
..++--|.| ..+++|++.-+...-.+-+-..-. ...++. ++.|+.+.+.|.+.++.+..+...-.+ .+..||
T Consensus 115 ~gViasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~--~nlGA~Vil~G~~~deAk~~a~~lAke---~gl~yI 189 (457)
T KOG1250|consen 115 AGVIASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRC--RNLGATVILSGEDWDEAKAFAKRLAKE---NGLTYI 189 (457)
T ss_pred CceEEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHH--hccCCEEEEecccHHHHHHHHHHHHHh---cCceec
Confidence 355677777 466777776665443221111101 112222 367888888899999888877665432 445666
Q ss_pred EEeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceEEcccc
Q 027514 171 ANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFI 209 (222)
Q Consensus 171 a~~ns~~~~visG~~~~l~~l~~~l~~~~~~~~~~L~~~ 209 (222)
--++.|. ++.|..+...++.++++... .+..+||.
T Consensus 190 ~pfDhP~--I~aGqgTig~EIl~ql~~~~--~AI~vpVG 224 (457)
T KOG1250|consen 190 PPFDHPD--IWAGQGTIGLEILEQLKEPD--GAIVVPVG 224 (457)
T ss_pred CCCCCch--hhcCcchHHHHHHHhhcCCC--CeEEEecC
Confidence 6665454 88999998889988888762 34566664
No 201
>PRK14436 acylphosphatase; Provisional
Probab=20.16 E-value=1.8e+02 Score=19.41 Aligned_cols=20 Identities=20% Similarity=0.239 Sum_probs=17.5
Q ss_pred CEEEEcCHHHHHHHHHHHHh
Q 027514 178 NYAVSGGVKGIEAVEAKAKS 197 (222)
Q Consensus 178 ~~visG~~~~l~~l~~~l~~ 197 (222)
.+.+.|+.+.|+++.+.|++
T Consensus 45 ei~~qG~~~~i~~f~~~l~~ 64 (91)
T PRK14436 45 EAVLEGDEERVEALIGWAHQ 64 (91)
T ss_pred EEEEEcCHHHHHHHHHHHhh
Confidence 35788999999999999985
No 202
>PLN02408 phospholipase A1
Probab=20.06 E-value=82 Score=27.17 Aligned_cols=17 Identities=35% Similarity=0.178 Sum_probs=11.8
Q ss_pred cEEeeccHHHHHHHHHh
Q 027514 94 DVTCGLSLGEYTALAFA 110 (222)
Q Consensus 94 ~~~~G~S~Ge~~A~~~a 110 (222)
-.+.|||+|---|..+|
T Consensus 202 I~vTGHSLGGALAtLaA 218 (365)
T PLN02408 202 LTITGHSLGAALATLTA 218 (365)
T ss_pred EEEeccchHHHHHHHHH
Confidence 37899999965554443
No 203
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=20.01 E-value=79 Score=26.11 Aligned_cols=19 Identities=37% Similarity=0.176 Sum_probs=15.1
Q ss_pred CccEEeeccHHHHHHHHHh
Q 027514 92 SVDVTCGLSLGEYTALAFA 110 (222)
Q Consensus 92 ~p~~~~G~S~Ge~~A~~~a 110 (222)
.+-++.|||.|-.+++.++
T Consensus 71 ~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 71 SRVALWGYSQGGQAALWAA 89 (290)
T ss_pred CCEEEEeeCccHHHHHHHH
Confidence 4568899999988877655
Done!