BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027515
(222 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345121426|gb|AEN74948.1| poly(A)-binding protein 1 [Citrus sinensis]
Length = 234
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/222 (98%), Positives = 219/222 (98%), Gaps = 2/222 (0%)
Query: 1 MEQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDL 60
MEQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHD DH EHEHDADNENEEDPNANSKDL
Sbjct: 1 MEQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDQDH--EHEHDADNENEEDPNANSKDL 58
Query: 61 EDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYA 120
EDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYA
Sbjct: 59 EDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYA 118
Query: 121 CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK
Sbjct: 119 CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 178
Query: 181 VSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 222
VSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG
Sbjct: 179 VSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 220
>gi|449458309|ref|XP_004146890.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 237
Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 173/219 (78%), Positives = 189/219 (86%), Gaps = 2/219 (0%)
Query: 4 HDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDM 63
+DE EH+VYGG+IPD+ + D D+D D + D + + E NANSKDLEDM
Sbjct: 7 YDEHEHEVYGGDIPDDAELDADLDMSSGRADEEATGRA--DEEGYDAEPSNANSKDLEDM 64
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
K+RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS+YVGNVDYACTP
Sbjct: 65 KRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTP 124
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVE+DAVQNALLLNE+ELHGRQLKVSA
Sbjct: 125 EEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSA 184
Query: 184 KRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 222
KRTN+PGMKQ+RGRRPN FGFRGRRPFIP P+ YGYG
Sbjct: 185 KRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYG 223
>gi|449519186|ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 229
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/219 (79%), Positives = 189/219 (86%), Gaps = 10/219 (4%)
Query: 4 HDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDM 63
+DE EH+VYGG+IPD+ + D D+D D E +DA E NANSKDLEDM
Sbjct: 7 YDEHEHEVYGGDIPDDAELDADLDMSSGRAD-----EEGYDA-----EPSNANSKDLEDM 56
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
K+RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS+YVGNVDYACTP
Sbjct: 57 KRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTP 116
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVE+DAVQNALLLNE+ELHGRQLKVSA
Sbjct: 117 EEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSA 176
Query: 184 KRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 222
KRTN+PGMKQ+RGRRPN FGFRGRRPFIP P+ YGYG
Sbjct: 177 KRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYG 215
>gi|225454892|ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
Length = 226
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/213 (79%), Positives = 182/213 (85%), Gaps = 15/213 (7%)
Query: 11 VYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEI 70
VYGGEIPDE + D D + + D + E+D + NSK++EDM+KRLKEI
Sbjct: 14 VYGGEIPDEGEMDADAE--------------DVDMVSRPEDDSDPNSKNIEDMRKRLKEI 59
Query: 71 EEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHF 130
EEEAGALREMQAKVEKEMGAVQDSSS SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHF
Sbjct: 60 EEEAGALREMQAKVEKEMGAVQDSSSASATQAEKEEVDSRSIYVGNVDYACTPEEVQQHF 119
Query: 131 QSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPG 190
QSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE+ELHGRQLKVSAKRTNIPG
Sbjct: 120 QSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNIPG 179
Query: 191 MKQFRGRRPNTFGFRGRRPFIPGVPFV-PYGYG 222
MKQ+RGRRPN FGFRGRRPF+PG F PYGYG
Sbjct: 180 MKQYRGRRPNPFGFRGRRPFMPGPSFYPPYGYG 212
>gi|224114678|ref|XP_002339510.1| predicted protein [Populus trichocarpa]
gi|222832586|gb|EEE71063.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/215 (77%), Positives = 180/215 (83%), Gaps = 21/215 (9%)
Query: 11 VYGGEIPD--EMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLK 68
VYGGEIPD EMDAD+D+ E ++ +DP NSKDLEDMKKRLK
Sbjct: 16 VYGGEIPDEGEMDADVDMSSRAEEDEY---------------QDP--NSKDLEDMKKRLK 58
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
EIEEEAGALREMQAKVEKEMGAVQDS SATQAEKEEVDSRSIYVGNVDY+CTPEEVQQ
Sbjct: 59 EIEEEAGALREMQAKVEKEMGAVQDSPGASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQ 118
Query: 129 HFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNI 188
HFQSCGTVNRVTILTDKFGQPKGFAYVEFVE+DA+QNALLLNE+ELHGRQLKVSAKRTN+
Sbjct: 119 HFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAIQNALLLNESELHGRQLKVSAKRTNV 178
Query: 189 PGMKQFRGRRPNTFGFRGRRPFIPGVPFVP-YGYG 222
PGMKQFRGRRP+ +G R RRPF+P PF P YGYG
Sbjct: 179 PGMKQFRGRRPSPYGLRSRRPFMPA-PFYPAYGYG 212
>gi|255539953|ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550156|gb|EEF51643.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 231
Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/215 (79%), Positives = 182/215 (84%), Gaps = 12/215 (5%)
Query: 11 VYGGEIPDE--MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLK 68
VYG EIPDE MDADID+ E + + + E++ N NSKDLEDMKKRLK
Sbjct: 13 VYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYDEQ---------NPNSKDLEDMKKRLK 63
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
EIEEEAGALREMQAKVEKEMGAVQDSSS SATQAEKEEVDSRS+YVGNVDYACTPEEVQQ
Sbjct: 64 EIEEEAGALREMQAKVEKEMGAVQDSSSGSATQAEKEEVDSRSVYVGNVDYACTPEEVQQ 123
Query: 129 HFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNI 188
HFQSCGTVNRVTILTDKFGQPKGFAYVEFVE+DAVQNALLLNE+ELHGRQLKVSAKRTNI
Sbjct: 124 HFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNI 183
Query: 189 PGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
PGMKQ+RGRRPN + GFR RRPF+P PYGYG
Sbjct: 184 PGMKQYRGRRPNPYSGFRSRRPFMPAPFSPPYGYG 218
>gi|351723063|ref|NP_001235474.1| uncharacterized protein LOC100527139 [Glycine max]
gi|255631638|gb|ACU16186.1| unknown [Glycine max]
Length = 214
Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 180/219 (82%), Gaps = 21/219 (9%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEE-DPNANSKDLEDM 63
+++EH+VYG +IPDE +ID+D DA+ ++E+ PN +K+LEDM
Sbjct: 2 EQEEHEVYGADIPDE---EIDMD---------------ADAEQQDEQLAPNHTNKELEDM 43
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
KKRLKEIEEEA ALREMQAKVEKEMGAVQDSS TSATQAEKEEVD+R IYVGNVDYACTP
Sbjct: 44 KKRLKEIEEEASALREMQAKVEKEMGAVQDSSGTSATQAEKEEVDARPIYVGNVDYACTP 103
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF EIDAVQNALLLNE+ELHGRQLKVSA
Sbjct: 104 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFAEIDAVQNALLLNESELHGRQLKVSA 163
Query: 184 KRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 222
KRTN+PGMKQ+ GRRP GFR RRPF+ F PYGYG
Sbjct: 164 KRTNVPGMKQYFGRRPA--GFRSRRPFMSAPFFPPYGYG 200
>gi|224134274|ref|XP_002321779.1| predicted protein [Populus trichocarpa]
gi|222868775|gb|EEF05906.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/215 (74%), Positives = 178/215 (82%), Gaps = 24/215 (11%)
Query: 11 VYGGEIPD--EMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLK 68
VYGGEIPD EMDAD D+ E ++ +DP NSKDLEDMK+RLK
Sbjct: 16 VYGGEIPDEGEMDADADMSSRAEEDEY---------------QDP--NSKDLEDMKRRLK 58
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
EIEEEAGALREMQAKVEKEMGAVQ + SATQAEKEEVDSRSIYVGNVDY+CTPEEVQQ
Sbjct: 59 EIEEEAGALREMQAKVEKEMGAVQGA---SATQAEKEEVDSRSIYVGNVDYSCTPEEVQQ 115
Query: 129 HFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNI 188
HFQSCGTVNRVTILTDKFGQPKGFAYVEF+E+DAVQNA+LLNE+ELHGRQLKVSAKRTN+
Sbjct: 116 HFQSCGTVNRVTILTDKFGQPKGFAYVEFIEVDAVQNAVLLNESELHGRQLKVSAKRTNV 175
Query: 189 PGMKQFRGRRPNTFGFRGRRPFIPGVPFVP-YGYG 222
PGMKQ+RGRRP+ +GFR +R F+P PF P YGYG
Sbjct: 176 PGMKQYRGRRPSPYGFRSQRAFMPA-PFYPAYGYG 209
>gi|147827572|emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera]
Length = 175
Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 151/161 (93%), Positives = 155/161 (96%), Gaps = 1/161 (0%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
M+KRLKEIEEEAGALREMQAKVEKEMGAVQDSSS SATQAEKEEVDSRSIYVGNVDYACT
Sbjct: 1 MRKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSASATQAEKEEVDSRSIYVGNVDYACT 60
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE+ELHGRQLKVS
Sbjct: 61 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVS 120
Query: 183 AKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFV-PYGYG 222
AKRTNIPGMKQ+RGRRPN FGFRGRRPF+PG F PYGYG
Sbjct: 121 AKRTNIPGMKQYRGRRPNPFGFRGRRPFMPGPSFYPPYGYG 161
>gi|255539947|ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550153|gb|EEF51640.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 234
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/229 (73%), Positives = 181/229 (79%), Gaps = 24/229 (10%)
Query: 11 VYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEI 70
VYG EIPDE + D D+D + + + E E+D + N NSKDLEDMKKRLKEI
Sbjct: 13 VYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYD-------EQNPNSKDLEDMKKRLKEI 65
Query: 71 EEEAGALREMQAKVEKEMGAVQD----------------SSSTSATQAEKEEVDSRSIYV 114
EEEAGALREMQAKVEKEMGAVQ SSS SATQAEKEEVDSRSIYV
Sbjct: 66 EEEAGALREMQAKVEKEMGAVQGISHSLPLSIYIVLWSYSSSGSATQAEKEEVDSRSIYV 125
Query: 115 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETEL 174
GNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE+DAVQNALLLNE+EL
Sbjct: 126 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESEL 185
Query: 175 HGRQLKVSAKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
HGRQLKVSAKRTNIPGMKQ+RGRRPN + GFR RRPF+P F PYGYG
Sbjct: 186 HGRQLKVSAKRTNIPGMKQYRGRRPNPYSGFRSRRPFMPAPFFPPYGYG 234
>gi|351725805|ref|NP_001237617.1| uncharacterized protein LOC100527545 [Glycine max]
gi|255632582|gb|ACU16641.1| unknown [Glycine max]
Length = 214
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 182/219 (83%), Gaps = 21/219 (9%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEE-DPNANSKDLEDM 63
+++EH+VYG +IPDE +ID+D DA+ ++E+ PN +K+LEDM
Sbjct: 2 EQEEHEVYGADIPDE---EIDMD---------------ADAEQQDEQLAPNHTNKELEDM 43
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
KKRLKEIEEEA ALREMQAKVEKEMGAV+DSS TSATQ E+EEVD+RSIYVGNVDYACTP
Sbjct: 44 KKRLKEIEEEASALREMQAKVEKEMGAVRDSSGTSATQVEREEVDARSIYVGNVDYACTP 103
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE+ELHGRQLKVSA
Sbjct: 104 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSA 163
Query: 184 KRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 222
KRTN+PGMKQ+ GRRP GFR RRPF+P F PYGYG
Sbjct: 164 KRTNVPGMKQYFGRRPA--GFRSRRPFMPAPFFPPYGYG 200
>gi|388515309|gb|AFK45716.1| unknown [Lotus japonicus]
Length = 218
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/222 (73%), Positives = 179/222 (80%), Gaps = 23/222 (10%)
Query: 5 DEQEHDVYGGEIPDE---MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLE 61
D++EH+VYG +IPDE MDAD D D + +HD +H PN KDLE
Sbjct: 2 DQEEHEVYGADIPDEEVEMDADADADAEQQDHDFASNH-------------PN---KDLE 45
Query: 62 DMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYAC 121
DMKKRLKEIEEEA ALREMQAKVEK+MGAVQD+ S SATQAEKEEVD RSIYVGNVDYAC
Sbjct: 46 DMKKRLKEIEEEASALREMQAKVEKDMGAVQDAGS-SATQAEKEEVDGRSIYVGNVDYAC 104
Query: 122 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQNA++LNE+ELHGRQLKV
Sbjct: 105 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVMLNESELHGRQLKV 164
Query: 182 SAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFV-PYGYG 222
SAKRTN+PGMKQ+ GRRP GFR RRPF+P PF PY YG
Sbjct: 165 SAKRTNVPGMKQYFGRRPA--GFRSRRPFMPYAPFYPPYAYG 204
>gi|388498186|gb|AFK37159.1| unknown [Lotus japonicus]
Length = 217
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/222 (73%), Positives = 178/222 (80%), Gaps = 23/222 (10%)
Query: 5 DEQEHDVYGGEIPDE---MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLE 61
D++EH+VYG +IPDE MDAD D D + +HD +H PN KDLE
Sbjct: 2 DQEEHEVYGADIPDEEVEMDADADADAEQQDHDFASNH-------------PN---KDLE 45
Query: 62 DMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYAC 121
DMKKRLKEIEEEA ALREMQAKVEK+MGAVQD+ S SATQAEKEEVD RSIYVGNVDYAC
Sbjct: 46 DMKKRLKEIEEEASALREMQAKVEKDMGAVQDAGS-SATQAEKEEVDGRSIYVGNVDYAC 104
Query: 122 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQNA++LNE ELHGRQLKV
Sbjct: 105 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVMLNELELHGRQLKV 164
Query: 182 SAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFV-PYGYG 222
SAKRTN+PGMKQ+ GRRP GFR RRPF+P PF PY YG
Sbjct: 165 SAKRTNVPGMKQYFGRRPA--GFRSRRPFMPYAPFYPPYAYG 204
>gi|255633822|gb|ACU17272.1| unknown [Glycine max]
Length = 183
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/202 (76%), Positives = 171/202 (84%), Gaps = 21/202 (10%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEE-DPNANSKDLEDM 63
+++EH+VYG +IPDE +ID+D DA+ ++E+ PN +K+LEDM
Sbjct: 2 EQEEHEVYGADIPDE---EIDMD---------------ADAEQQDEQLAPNHTNKELEDM 43
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
KKRLKEIEEEA ALREMQAKVEKEMGAVQDSS TSATQAEKEEVD+RSIYVGNVDYACTP
Sbjct: 44 KKRLKEIEEEASALREMQAKVEKEMGAVQDSSGTSATQAEKEEVDARSIYVGNVDYACTP 103
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE+ELHGRQLKVSA
Sbjct: 104 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSA 163
Query: 184 KRTNIPGMKQFRGRRPNTFGFR 205
KRTN+PGMKQ+ GRRP GFR
Sbjct: 164 KRTNVPGMKQYFGRRPA--GFR 183
>gi|388491050|gb|AFK33591.1| unknown [Medicago truncatula]
Length = 179
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/170 (84%), Positives = 154/170 (90%), Gaps = 3/170 (1%)
Query: 53 PNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSI 112
PN +K+LEDMKKRLKEIEEEA ALREMQAKVEKEMGAVQD + +S +QAEKEEVD+RSI
Sbjct: 13 PNHTTKELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSI 72
Query: 113 YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNET 172
YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE DAVQNAL+LNET
Sbjct: 73 YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALILNET 132
Query: 173 ELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 222
ELHGRQLKVSAKRTN+PG+KQ+ GRRP GFRGRRPF+P F PY YG
Sbjct: 133 ELHGRQLKVSAKRTNVPGLKQY-GRRPA--GFRGRRPFMPAPSFPPYAYG 179
>gi|217074200|gb|ACJ85460.1| unknown [Medicago truncatula]
gi|388522377|gb|AFK49250.1| unknown [Medicago truncatula]
Length = 217
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 158/221 (71%), Positives = 178/221 (80%), Gaps = 22/221 (9%)
Query: 5 DEQEHDVYGGEIPDE---MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLE 61
+++EH+VYG +IPDE MDADID + E + + +H +K+LE
Sbjct: 2 EQEEHEVYGADIPDEEVDMDADIDAEHQEGDEELASNH----------------TTKELE 45
Query: 62 DMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYAC 121
DMKKRLKEIEEEA ALREMQAKVEKEMGAVQD + +S +QAEKEEVD+RSIYVGNVDYAC
Sbjct: 46 DMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVDYAC 105
Query: 122 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE DAVQNAL+LNETELHGRQLKV
Sbjct: 106 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALILNETELHGRQLKV 165
Query: 182 SAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 222
SAKRTN+PG+KQ+ GRRP GFRGRRPF+P F PY YG
Sbjct: 166 SAKRTNVPGLKQY-GRRPA--GFRGRRPFMPAPFFPPYAYG 203
>gi|255581746|ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein, putative [Ricinus communis]
Length = 218
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 172/219 (78%), Gaps = 18/219 (8%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+E+EH+VYGGEIPD M+ DID H+ D + + K+L++MK
Sbjct: 2 EEEEHEVYGGEIPD-MEGDID----------------PHNVDMDMSAADDDAVKELDEMK 44
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
KRLKE+EEEA ALREMQAKVEKEMGAVQD +S +A QA KEE DSRS++VGNVDYACTPE
Sbjct: 45 KRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAANQANKEETDSRSVFVGNVDYACTPE 104
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E++A+Q ALLLNE+ELHGRQLKV K
Sbjct: 105 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVLPK 164
Query: 185 RTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
RTN+PGMKQ+R RR N + G+R RRP++P + PYGYG
Sbjct: 165 RTNVPGMKQYRPRRFNPYMGYRFRRPYVPPYFYSPYGYG 203
>gi|357440891|ref|XP_003590723.1| Polyadenylate-binding protein [Medicago truncatula]
gi|217072228|gb|ACJ84474.1| unknown [Medicago truncatula]
gi|355479771|gb|AES60974.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 187
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/205 (72%), Positives = 167/205 (81%), Gaps = 22/205 (10%)
Query: 5 DEQEHDVYGGEIPDE---MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLE 61
+++EH+VYG +IPDE MDADID + E + + +H +K+LE
Sbjct: 2 EQEEHEVYGADIPDEEVDMDADIDAEHQEGDEELASNH----------------TTKELE 45
Query: 62 DMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYAC 121
DMKKRLKEIEEEA ALREMQAKVEKEMGAVQD + +S +QAEKEEVD+RSIYVGNVDYAC
Sbjct: 46 DMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVDYAC 105
Query: 122 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE DAVQNAL+LNETELHGRQLKV
Sbjct: 106 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALILNETELHGRQLKV 165
Query: 182 SAKRTNIPGMKQFRGRRPNTFGFRG 206
SAKRTN+PG+KQ+ GRRP GFRG
Sbjct: 166 SAKRTNVPGLKQY-GRRPA--GFRG 187
>gi|21536704|gb|AAM61036.1| contains similarity to poly(A)-binding protein II [Arabidopsis
thaliana]
Length = 227
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/224 (68%), Positives = 181/224 (80%), Gaps = 13/224 (5%)
Query: 1 MEQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDL 60
M HDEQEH+VYGG+IP+E + ++D +E+E + + + + P ++S+DL
Sbjct: 1 MPVHDEQEHEVYGGDIPEEEEGEMDTEEYEEHGGEEGAAAGDEELE------PGSSSRDL 54
Query: 61 EDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYA 120
EDMKKR+KEIEEEAGALREMQAK EK+MGA QD S + AEKEEVDSRSIYVGNVDYA
Sbjct: 55 EDMKKRIKEIEEEAGALREMQAKAEKDMGASQDPSG-GVSAAEKEEVDSRSIYVGNVDYA 113
Query: 121 CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQN+L+LNE+ELHGRQ+K
Sbjct: 114 CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIK 173
Query: 181 VSAKRTNIPGMKQFRGR-RPNTFGFRGRRPFIPGVPFV-PYGYG 222
VSAKRTN+PGM+QFRGR RP FR R F+PGVPF PY YG
Sbjct: 174 VSAKRTNVPGMRQFRGRGRP----FRPMRGFMPGVPFYPPYAYG 213
>gi|224081120|ref|XP_002306300.1| predicted protein [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 172/219 (78%), Gaps = 18/219 (8%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+E+EH+VYGGEIPD ++ D+D H+AD + + K+L++MK
Sbjct: 2 EEEEHEVYGGEIPD-VEGDMD----------------PHNADVDMSAADDDAVKELDEMK 44
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
KRLKE+EEEA ALREMQAKVEKEMGAVQD ++ +A QA +EE DSRS++VGNVDYACTPE
Sbjct: 45 KRLKEMEEEAAALREMQAKVEKEMGAVQDPATAAANQANREEADSRSVFVGNVDYACTPE 104
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E++AVQ AL LNE+ELHGRQLKVS K
Sbjct: 105 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVSPK 164
Query: 185 RTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
RTN+PGMKQ+R RR N + G+R RRP+ P + PYGYG
Sbjct: 165 RTNVPGMKQYRPRRINPYMGYRFRRPYAPPYFYSPYGYG 203
>gi|387169522|gb|AFJ66183.1| hypothetical protein 11M19.19 [Arabidopsis halleri]
Length = 228
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/172 (80%), Positives = 153/172 (88%), Gaps = 6/172 (3%)
Query: 52 DPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS 111
+P ++SKDLEDMKKR+KEIEEEAGALREMQAK EK+MGA QD S + AEKEEVDSRS
Sbjct: 48 EPGSSSKDLEDMKKRIKEIEEEAGALREMQAKAEKDMGAGQDPSG-GVSAAEKEEVDSRS 106
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQN+L+LNE
Sbjct: 107 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNE 166
Query: 172 TELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFV-PYGYG 222
+ELHGRQ+KVSAKRTN+PGM+QFRGRRP FR R F+PGVPF PY YG
Sbjct: 167 SELHGRQIKVSAKRTNVPGMRQFRGRRP----FRPMRGFMPGVPFYPPYAYG 214
>gi|297792425|ref|XP_002864097.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
gi|297309932|gb|EFH40356.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
Length = 228
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/172 (80%), Positives = 153/172 (88%), Gaps = 6/172 (3%)
Query: 52 DPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS 111
+P ++SKDLEDMKKR+KEIEEEAGALREMQAK EK+MGA QD S + AEKEEVDSRS
Sbjct: 48 EPGSSSKDLEDMKKRIKEIEEEAGALREMQAKAEKDMGAGQDPSG-GVSAAEKEEVDSRS 106
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQN+L+LNE
Sbjct: 107 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNE 166
Query: 172 TELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFV-PYGYG 222
+ELHGRQ+KVSAKRTN+PGM+QFRGRRP FR R F+PGVPF PY YG
Sbjct: 167 SELHGRQIKVSAKRTNVPGMRQFRGRRP----FRPMRGFMPGVPFYPPYAYG 214
>gi|8843848|dbj|BAA97374.1| unnamed protein product [Arabidopsis thaliana]
Length = 267
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/224 (66%), Positives = 173/224 (77%), Gaps = 13/224 (5%)
Query: 1 MEQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDL 60
M HDEQEH+VY + + + +++ E A + E +P ++S+DL
Sbjct: 1 MPVHDEQEHEVY------GGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDL 54
Query: 61 EDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYA 120
EDMKKR+KEIEEEAGALREMQAK EK+MGA QD S + AEKEEVDSRSIYVGNVDYA
Sbjct: 55 EDMKKRIKEIEEEAGALREMQAKAEKDMGASQDPSG-GVSAAEKEEVDSRSIYVGNVDYA 113
Query: 121 CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQN+L+LNE+ELHGRQ+K
Sbjct: 114 CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIK 173
Query: 181 VSAKRTNIPGMKQFRGR-RPNTFGFRGRRPFIPGVPFV-PYGYG 222
VSAKRTN+PGM+QFRGR RP FR R F+PGVPF PY YG
Sbjct: 174 VSAKRTNVPGMRQFRGRGRP----FRPMRGFMPGVPFYPPYAYG 213
>gi|224093736|ref|XP_002309968.1| predicted protein [Populus trichocarpa]
gi|222852871|gb|EEE90418.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 167/219 (76%), Gaps = 18/219 (8%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+E+EH+VYGGEIPD ++ D+D H D D ED K+L++MK
Sbjct: 2 EEEEHEVYGGEIPD-VEGDMD--------------PHNADVDMSAAEDDAV--KELDEMK 44
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
KRLKE+EEEA ALREMQAKVEKEMGAV D +S +A QA KEE DSRS++VGNVDYACTPE
Sbjct: 45 KRLKEMEEEAAALREMQAKVEKEMGAVPDPASAAANQANKEEADSRSVFVGNVDYACTPE 104
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQ AL LNE+ELHGRQLKVS K
Sbjct: 105 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEALALNESELHGRQLKVSPK 164
Query: 185 RTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
RTN+PGMKQ+ R N + G R RRP+ P + PYGYG
Sbjct: 165 RTNVPGMKQYHPRSFNPYMGNRFRRPYAPPYFYSPYGYG 203
>gi|449458283|ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 167/219 (76%), Gaps = 24/219 (10%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+E+EH+VYGGEIP E + + DVD + D K+L++MK
Sbjct: 2 EEEEHEVYGGEIPVEGEMEGDVDMSAGDDD---------------------AVKELDEMK 40
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
KRLKE+EEEA ALREMQAKVEKEMGAVQD + TSA+QA KEE DSRS++VGNVDYACTPE
Sbjct: 41 KRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE 100
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL+LNE+ELHGRQLKV K
Sbjct: 101 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPK 160
Query: 185 RTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
RTN+PGMKQ+R RR N + GF RRP+ P + PYGYG
Sbjct: 161 RTNVPGMKQYRARRYNPYVGF--RRPYAPPYFYSPYGYG 197
>gi|388515797|gb|AFK45960.1| unknown [Lotus japonicus]
Length = 171
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/161 (85%), Positives = 146/161 (90%), Gaps = 4/161 (2%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MKKRLKEIEEEA ALREMQAKVEK+MGAVQD+ S SATQAEKEEVD RSIYVGNVDYACT
Sbjct: 1 MKKRLKEIEEEASALREMQAKVEKDMGAVQDAGS-SATQAEKEEVDGRSIYVGNVDYACT 59
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQNA++LNE+ELHGRQLKVS
Sbjct: 60 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVMLNESELHGRQLKVS 119
Query: 183 AKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFV-PYGYG 222
AKRTN+PGMKQ+ GRRP GFR RRPF+P PF PY YG
Sbjct: 120 AKRTNVPGMKQYFGRRPA--GFRSRRPFMPYAPFYPPYAYG 158
>gi|18423239|ref|NP_568751.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|15809838|gb|AAL06847.1| AT5g51120/MWD22_6 [Arabidopsis thaliana]
gi|15982733|gb|AAL09819.1| unknown protein [Arabidopsis thaliana]
gi|19310785|gb|AAL85123.1| unknown protein [Arabidopsis thaliana]
gi|21358850|gb|AAM47151.1| unknown protein [Arabidopsis thaliana]
gi|332008655|gb|AED96038.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 227
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/224 (66%), Positives = 173/224 (77%), Gaps = 13/224 (5%)
Query: 1 MEQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDL 60
M HDEQEH+VY + + + +++ E A + E +P ++S+DL
Sbjct: 1 MPVHDEQEHEVY------GGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDL 54
Query: 61 EDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYA 120
EDMKKR+KEIEEEAGALREMQAK EK+MGA QD S + AEKEEVDSRSIYVGNVDYA
Sbjct: 55 EDMKKRIKEIEEEAGALREMQAKAEKDMGASQDPSG-GVSAAEKEEVDSRSIYVGNVDYA 113
Query: 121 CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQN+L+LNE+ELHGRQ+K
Sbjct: 114 CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIK 173
Query: 181 VSAKRTNIPGMKQFRGR-RPNTFGFRGRRPFIPGVPFV-PYGYG 222
VSAKRTN+PGM+QFRGR RP FR R F+PGVPF PY YG
Sbjct: 174 VSAKRTNVPGMRQFRGRGRP----FRPMRGFMPGVPFYPPYAYG 213
>gi|297797553|ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312496|gb|EFH42920.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 220
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/221 (64%), Positives = 172/221 (77%), Gaps = 20/221 (9%)
Query: 5 DEQEHDVYGGEIPD--EMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLED 62
+E+EH+VYGGEIPD EMD D++ + D + + K+L++
Sbjct: 2 EEEEHEVYGGEIPDVGEMDGDMEA----------------LNPDLDMAAADDDAVKELDE 45
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MKKRLKE+E+EA ALREMQAKVEKEMGA QD +S +A QA KEEVD+RS++VGNVDYACT
Sbjct: 46 MKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVDYACT 104
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEFVE++AVQ AL LNE+ELHGRQLKV
Sbjct: 105 PEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVL 164
Query: 183 AKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
KRTN+PG+KQFRGRR N + G+R RRPF+P + PYGYG
Sbjct: 165 QKRTNVPGLKQFRGRRFNPYMGYRFRRPFMPPYMYSPYGYG 205
>gi|449513137|ref|XP_004164242.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 166/219 (75%), Gaps = 24/219 (10%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+E+EH+VYGGEIP E + + DVD + D K+L++MK
Sbjct: 2 EEEEHEVYGGEIPVEGEMEGDVDMSAGDDD---------------------AVKELDEMK 40
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
KRLKE+EEEA ALREMQAKV KEMGAVQD + TSA+QA KEE DSRS++VGNVDYACTPE
Sbjct: 41 KRLKEMEEEAAALREMQAKVGKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE 100
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL+LNE+ELHGRQLKV K
Sbjct: 101 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPK 160
Query: 185 RTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
RTN+PGMKQ+R RR N + GF RRP+ P + PYGYG
Sbjct: 161 RTNVPGMKQYRARRYNPYVGF--RRPYAPPYFYSPYGYG 197
>gi|302755738|ref|XP_002961293.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
gi|300172232|gb|EFJ38832.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
Length = 221
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 172/218 (78%), Gaps = 20/218 (9%)
Query: 6 EQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKK 65
++EH+VYG EIPDE V+E HE A+ +D +A K+LEDMKK
Sbjct: 8 DEEHEVYGAEIPDE------VEEEAHEK-----------AEGPARDDGSAKFKELEDMKK 50
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RLKE+E+EA ALR+MQAKVEKEMGA QD+++ A+QA KEE D+RS+YVGNVDY+CTPEE
Sbjct: 51 RLKEMEDEAAALRDMQAKVEKEMGAGQDANA--ASQAGKEEADARSVYVGNVDYSCTPEE 108
Query: 126 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
VQQHFQSCGTVNRVTILTDKFGQPKG+AYVEF+E +AVQNA+LLNE+ELHGR LKVSAKR
Sbjct: 109 VQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEGEAVQNAILLNESELHGRPLKVSAKR 168
Query: 186 TNIPGMKQFRGRRPN-TFGFRGRRPFIPGVPFVPYGYG 222
TN+PGMKQ+RGRR + ++ + RR ++P + PYG+G
Sbjct: 169 TNVPGMKQYRGRRFDPSYAYMTRRAYMPPYAYAPYGFG 206
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 170/221 (76%), Gaps = 25/221 (11%)
Query: 5 DEQEHDVYGGEIPDE--MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLED 62
+E+EH+VYGGEIPDE M+ DID+ + +A K+L++
Sbjct: 2 EEEEHEVYGGEIPDEGEMEGDIDMSAADD----------------------DAAVKELDE 39
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MK+RLKE+EEEA ALREMQAKV+KE+G+VQD ++++A+QA KEE DSRS++VGNVDYACT
Sbjct: 40 MKRRLKEMEEEAAALREMQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACT 99
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQ ALLLNE+ELHGRQLKV
Sbjct: 100 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVL 159
Query: 183 AKRTNIPGMKQFRGRRPNTFGFRG-RRPFIPGVPFVPYGYG 222
KRTN+PGMKQ+R RR N + G RRP+ P + PYGYG
Sbjct: 160 PKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGYG 200
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 170/221 (76%), Gaps = 25/221 (11%)
Query: 5 DEQEHDVYGGEIPDE--MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLED 62
+E+EH+VYGGEIPDE M+ DID+ + +A K+L++
Sbjct: 2 EEEEHEVYGGEIPDEGEMEGDIDMSAADD----------------------DAAVKELDE 39
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MK+RLKE+EEEA ALREMQAKV+KE+G+VQD ++++A+QA KEE DSRS++VGNVDYACT
Sbjct: 40 MKRRLKEMEEEAAALREMQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACT 99
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQ ALLLNE+ELHGRQLKV
Sbjct: 100 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVL 159
Query: 183 AKRTNIPGMKQFRGRRPNTFGFRG-RRPFIPGVPFVPYGYG 222
KRTN+PGMKQ+R RR N + G RRP+ P + PYGYG
Sbjct: 160 PKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGYG 200
>gi|302803015|ref|XP_002983261.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
gi|300148946|gb|EFJ15603.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
Length = 219
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 172/218 (78%), Gaps = 22/218 (10%)
Query: 6 EQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKK 65
++EH+VYG EIPDE VDE HE A+ +D +A K+LEDMKK
Sbjct: 8 DEEHEVYGAEIPDE------VDEEAHEK-----------AEGPARDDGSA--KELEDMKK 48
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RLKE+E+EA ALR+MQAKVEKEMGA QD++ +A+QA KEE D+RS+YVGNVDY+CTPEE
Sbjct: 49 RLKEMEDEAAALRDMQAKVEKEMGASQDAN--AASQAGKEEADARSVYVGNVDYSCTPEE 106
Query: 126 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
VQQHFQSCGTVNRVTILTDKFGQPKG+AYVEF+E +AVQNA+LLNE+ELHGR LKVSAKR
Sbjct: 107 VQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEGEAVQNAILLNESELHGRPLKVSAKR 166
Query: 186 TNIPGMKQFRGRRPN-TFGFRGRRPFIPGVPFVPYGYG 222
TN+PGMKQ+RGRR + ++ + RR ++P + PYG+G
Sbjct: 167 TNVPGMKQYRGRRFDPSYAYMTRRAYMPPYAYAPYGFG 204
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
gi|388501418|gb|AFK38775.1| unknown [Medicago truncatula]
Length = 216
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/221 (63%), Positives = 168/221 (76%), Gaps = 24/221 (10%)
Query: 5 DEQEHDVYGGEIPD--EMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLED 62
DE+EH+VYGGEIPD EM+ D+D+ AD+E K+L++
Sbjct: 2 DEEEHEVYGGEIPDVAEMEGDVDMSA----------------ADDE-----AGGMKELDE 40
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
M++RLKE+EEEA ALREM AKVEKE+G+VQD +S +A+Q KEE D+RS++VGNVDYACT
Sbjct: 41 MRRRLKEMEEEAAALREMHAKVEKEIGSVQDPASVAASQENKEEADARSVFVGNVDYACT 100
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQ ALLL+E+ELHGRQLKV
Sbjct: 101 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVETEAVQEALLLSESELHGRQLKVL 160
Query: 183 AKRTNIPGMKQFRGRRPNTFGFRG-RRPFIPGVPFVPYGYG 222
KRTN+PGMKQ+R RR N + G RRP+ P + PYGYG
Sbjct: 161 PKRTNVPGMKQYRPRRFNPYMAYGFRRPYAPPYMYSPYGYG 201
>gi|346464877|gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 170/219 (77%), Gaps = 21/219 (9%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+++EH+VYGGEIPDE DA ++ D D +D ++L++MK
Sbjct: 2 EDEEHEVYGGEIPDE-DAYMNTD-----------------VDMIRTDDDAVKLQELDEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
KRLKE+EEEA ALREMQAKVEKEMGA QD +S +A Q K+EVDSRS++VGNVDY+CTPE
Sbjct: 44 KRLKEMEEEAAALREMQAKVEKEMGAGQDPASAAANQESKQEVDSRSVFVGNVDYSCTPE 103
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQSCGTVNRVTILTDKFGQPKG+AYVEF+E++AVQ AL LNE+ELHGRQLKVSAK
Sbjct: 104 EVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEVEAVQEALQLNESELHGRQLKVSAK 163
Query: 185 RTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
RTN+PGMKQ+R RR N + G R RRP++P + P+GYG
Sbjct: 164 RTNVPGMKQYRMRRFNPYIGTRYRRPYMPY--YSPFGYG 200
>gi|15238390|ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|10178188|dbj|BAB11662.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|23197620|gb|AAN15337.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|332010647|gb|AED98030.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/221 (64%), Positives = 171/221 (77%), Gaps = 20/221 (9%)
Query: 5 DEQEHDVYGGEIPD--EMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLED 62
+E+EH+VYGGEIPD EMD D++ + D + + K+L++
Sbjct: 2 EEEEHEVYGGEIPDVGEMDGDMEA----------------LNPDLDMAAADDDAVKELDE 45
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MKKRLKE+E+EA ALREMQAKVEKEMGA QD +S +A QA KEEVD+RS++VGNVDYACT
Sbjct: 46 MKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVDYACT 104
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEFVE++AVQ AL LNE+ELHGRQLKV
Sbjct: 105 PEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVL 164
Query: 183 AKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
KRTN+PG+KQFRGRR N + G+R RRPF+ + PYGYG
Sbjct: 165 QKRTNVPGLKQFRGRRFNPYMGYRFRRPFMSPYMYSPYGYG 205
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/221 (64%), Positives = 171/221 (77%), Gaps = 20/221 (9%)
Query: 5 DEQEHDVYGGEIPDE--MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLED 62
+E+EH+VYGGEIPDE M+ DID+ + E D +A K+L++
Sbjct: 2 EEEEHEVYGGEIPDEGEMEGDIDMSAADDEAAVDD----------------DAAVKELDE 45
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MK+RLKE+EEEA ALREMQAKVEKE+G+VQD ++ +A+QA KEE D+RS++VGNVDYACT
Sbjct: 46 MKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANAAASQANKEEADARSVFVGNVDYACT 105
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQ ALLLNE+ELHGRQLKV
Sbjct: 106 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVL 165
Query: 183 AKRTNIPGMKQFRGRRPNTFGFRG-RRPFIPGVPFVPYGYG 222
KRTN+PGMKQ+R R N + G RRP+ P + + PYGYG
Sbjct: 166 PKRTNVPGMKQYRPRCFNPYMAYGFRRPYTPYL-YSPYGYG 205
>gi|358248734|ref|NP_001239931.1| uncharacterized protein LOC100791351 [Glycine max]
gi|255647673|gb|ACU24298.1| unknown [Glycine max]
Length = 197
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/170 (74%), Positives = 149/170 (87%), Gaps = 3/170 (1%)
Query: 56 NSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVG 115
S++L+DMKKRLKE+E+EA ALREMQAKVEKEMG+ QD ++ SA+QA KEE+DSRS++VG
Sbjct: 13 TSEELDDMKKRLKEMEDEAAALREMQAKVEKEMGSAQDPANASASQANKEEIDSRSVFVG 72
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELH 175
NVDY+CTPEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF+E++AVQ ALLLNE+ELH
Sbjct: 73 NVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQEALLLNESELH 132
Query: 176 GRQLKVSAKRTNIPGMKQFRGRR---PNTFGFRGRRPFIPGVPFVPYGYG 222
GRQLKV+AKRTNIPGMKQ+R RR P GFRGR P+ P + PYGYG
Sbjct: 133 GRQLKVTAKRTNIPGMKQYRPRRTINPYMGGFRGRTPYAPPFIYSPYGYG 182
>gi|15238140|ref|NP_196597.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7671468|emb|CAB89408.1| RNA binding protein-like [Arabidopsis thaliana]
gi|28393013|gb|AAO41941.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|28827384|gb|AAO50536.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|332004146|gb|AED91529.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 217
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/220 (64%), Positives = 164/220 (74%), Gaps = 21/220 (9%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEH-EHDADNENEEDPNANSKDLEDM 63
+E+EH+VYGGEIP+ D D+ D D D + DA E L +M
Sbjct: 2 EEEEHEVYGGEIPEVGDTDVP--------DPDIDMSAADEDAVTE-----------LAEM 42
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
K+RLKE+EEEA ALREMQAKVEKEMGA QD +S +A Q KEEVD+RS+YVGNVDYACTP
Sbjct: 43 KRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTP 102
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEFVE++AVQ AL LNE+ELHGRQLKVS
Sbjct: 103 EEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSP 162
Query: 184 KRTNIPGMKQFR-GRRPNTFGFRGRRPFIPGVPFVPYGYG 222
KRTN+PGMKQ+ GR + G+R RRPF+P + PYGYG
Sbjct: 163 KRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYG 202
>gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Brassica rapa]
Length = 220
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 170/221 (76%), Gaps = 20/221 (9%)
Query: 5 DEQEHDVYGGEIPD--EMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLED 62
+E+EH+VYGGEIPD EMD D++ + D E +K+L++
Sbjct: 2 EEEEHEVYGGEIPDVGEMDGDMEAP----------------NPDMEMAAADEDAAKELDE 45
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MKKRLKE+E+EA ALREMQAKVEKEMGA QD ++ +A QA KEEVD+RS++VGNVDYACT
Sbjct: 46 MKKRLKEMEDEAAALREMQAKVEKEMGA-QDPATLAANQAGKEEVDARSVFVGNVDYACT 104
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQSCGTV+RVTILTDKFGQPKGFAYVEFVE++A+Q AL LNE+ELHGRQLKV
Sbjct: 105 PEEVQQHFQSCGTVHRVTILTDKFGQPKGFAYVEFVEVEAIQEALQLNESELHGRQLKVL 164
Query: 183 AKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
KRTN+PG+KQ RGRR N + G+R RRPF+ + PYGYG
Sbjct: 165 PKRTNVPGLKQHRGRRFNPYMGYRFRRPFMSPYMYSPYGYG 205
>gi|30683122|ref|NP_850803.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004145|gb|AED91528.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 202
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/220 (64%), Positives = 164/220 (74%), Gaps = 21/220 (9%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEH-EHDADNENEEDPNANSKDLEDM 63
+E+EH+VYGGEIP+ D D+ D D D + DA E L +M
Sbjct: 2 EEEEHEVYGGEIPEVGDTDVP--------DPDIDMSAADEDAVTE-----------LAEM 42
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
K+RLKE+EEEA ALREMQAKVEKEMGA QD +S +A Q KEEVD+RS+YVGNVDYACTP
Sbjct: 43 KRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTP 102
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEFVE++AVQ AL LNE+ELHGRQLKVS
Sbjct: 103 EEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSP 162
Query: 184 KRTNIPGMKQFR-GRRPNTFGFRGRRPFIPGVPFVPYGYG 222
KRTN+PGMKQ+ GR + G+R RRPF+P + PYGYG
Sbjct: 163 KRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYG 202
>gi|116780872|gb|ABK21856.1| unknown [Picea sitchensis]
Length = 215
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/205 (66%), Positives = 161/205 (78%), Gaps = 18/205 (8%)
Query: 6 EQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKK 65
++EH YG EIPD D +D + + D EDP K+LE+MKK
Sbjct: 2 DEEHGSYGAEIPDMDDEMLD---------------SQLNKDEGASEDPAV--KELEEMKK 44
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RLKE+EEEA ALR+MQAKVEKEMGAVQD ++++A+QA KEE D+RSIYVGNVDYACTPEE
Sbjct: 45 RLKEMEEEAAALRDMQAKVEKEMGAVQDPAASAASQATKEEADTRSIYVGNVDYACTPEE 104
Query: 126 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
VQQHFQSCGTVNRVTILTDKFGQPKG+AYVEF+E +AVQNA+LLNE+ELHGRQLKV+AKR
Sbjct: 105 VQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEAEAVQNAILLNESELHGRQLKVTAKR 164
Query: 186 TNIPGMKQFRGRRPNTFGFRGRRPF 210
TN+PGMKQFRGRR + + G RP+
Sbjct: 165 TNVPGMKQFRGRRFSA-PYMGYRPW 188
>gi|449451417|ref|XP_004143458.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449496421|ref|XP_004160130.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/220 (63%), Positives = 167/220 (75%), Gaps = 26/220 (11%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+E+EH+VYGGEIP E + DID+ + D +A K+L++MK
Sbjct: 2 EEEEHEVYGGEIPVE-EGDIDM----------------------SATDDDA-IKELDEMK 37
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
KRLKE+EEEA ALREMQAKVEKEMGAVQD + ++ +Q KEE DSRS++VGNVDYACTPE
Sbjct: 38 KRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPE 97
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVE +A+Q ALLLNETELHGRQLKV K
Sbjct: 98 EVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQK 157
Query: 185 RTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPY-GYG 222
RTN+PGMKQ+ +R N + G+R RRP++P + PY GYG
Sbjct: 158 RTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYG 197
>gi|297811137|ref|XP_002873452.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319289|gb|EFH49711.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 202
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/219 (62%), Positives = 162/219 (73%), Gaps = 19/219 (8%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+E+EH+VYGGEIP+ + D+ D D + + +L +MK
Sbjct: 2 EEEEHEVYGGEIPEVEETDVP------------------DPDIDMSAGDDDAVTELAEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
KRLKE+EEEA ALREMQAKVEKEMGA QD ++ +A Q KEEVD+RS+YVGNVDYACTPE
Sbjct: 44 KRLKEMEEEAAALREMQAKVEKEMGATQDPATMAANQEGKEEVDARSVYVGNVDYACTPE 103
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEFVE++AVQ AL LNE+ELHGRQLKVS K
Sbjct: 104 EVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPK 163
Query: 185 RTNIPGMKQFR-GRRPNTFGFRGRRPFIPGVPFVPYGYG 222
RTN+PGMKQ+ GR + G+R RRPF+P + PYGYG
Sbjct: 164 RTNVPGMKQYHPGRFNPSIGYRFRRPFVPPYFYSPYGYG 202
>gi|168066118|ref|XP_001784990.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663448|gb|EDQ50211.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 167/215 (77%), Gaps = 15/215 (6%)
Query: 6 EQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKK 65
E+EH+VYGG+IP+E++ DI+ D D + D D +E A SK+LE+MKK
Sbjct: 2 EEEHEVYGGDIPEEVEGDIEGD-----LDGEPDDLVLKGDDTTTDE---AASKELEEMKK 53
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RLKE+EEEA ALR+MQAKVEKEMGAVQDS + +EE D+RS++VGNVDY+CTPEE
Sbjct: 54 RLKEMEEEAAALRDMQAKVEKEMGAVQDSVGKDGSATNREEADARSVFVGNVDYSCTPEE 113
Query: 126 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E++AVQNA+LL+E+ELH R LKV+AKR
Sbjct: 114 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNAILLSESELHNRPLKVTAKR 173
Query: 186 TNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYG 220
TN+PGMK +RGR +G+R RRP+ P PYG
Sbjct: 174 TNVPGMKAYRGR--PYYGYRSRRPYPP-----PYG 201
>gi|168065663|ref|XP_001784768.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663676|gb|EDQ50428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/208 (65%), Positives = 164/208 (78%), Gaps = 9/208 (4%)
Query: 6 EQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKK 65
E+EH+VYGG+IP E++ DI+ D D + D D +E A SK+LE+MKK
Sbjct: 2 EEEHEVYGGDIPVEVEGDIEGD-----LDGEPDDLLLKGDDTATDE---AASKELEEMKK 53
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RLKE+EEEA ALR+MQAKVEKEM AVQDS + A +EE D+RS++VGNVDY+CTPEE
Sbjct: 54 RLKEMEEEAAALRDMQAKVEKEMSAVQDSVGKDGSPANREEADARSVFVGNVDYSCTPEE 113
Query: 126 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E++AVQNA+LLNE+ELH RQLKV+AKR
Sbjct: 114 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNAILLNESELHNRQLKVTAKR 173
Query: 186 TNIPGMKQFRGRRPNTF-GFRGRRPFIP 212
TN+PGMK +RGR F G+R RRP+ P
Sbjct: 174 TNVPGMKAYRGRPYAPFYGYRPRRPYPP 201
>gi|449438769|ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/170 (74%), Positives = 148/170 (87%), Gaps = 1/170 (0%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIY 113
+AN +L+DMKKRLK++E+EA ALREMQAKVEKEM +VQD +S +A+QA +EEVDSRS++
Sbjct: 12 DANDAELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVF 71
Query: 114 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETE 173
VGNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPKG+AYVEFVE +AVQ ALLLNE+E
Sbjct: 72 VGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESE 131
Query: 174 LHGRQLKVSAKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
LHGRQLKV+AKRTNIPGMKQ+R RR N F G R R P++ F PYGYG
Sbjct: 132 LHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG 181
>gi|358248311|ref|NP_001240115.1| uncharacterized protein LOC100784473 [Glycine max]
gi|255635956|gb|ACU18324.1| unknown [Glycine max]
Length = 197
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 148/170 (87%), Gaps = 3/170 (1%)
Query: 56 NSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVG 115
+++L+DMKKRLKE+E+EA ALREMQAKVEKEMG+VQD ++ SA+QA KEE+DSRS++VG
Sbjct: 13 TNEELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPANASASQANKEEIDSRSVFVG 72
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELH 175
NVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPKG+AYVEF+E++AVQ ALLLNE+ELH
Sbjct: 73 NVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEVEAVQEALLLNESELH 132
Query: 176 GRQLKVSAKRTNIPGMKQFRGRR---PNTFGFRGRRPFIPGVPFVPYGYG 222
GRQLKV+AKRTNIPGMKQ+R RR P G RGR P+ + PYGYG
Sbjct: 133 GRQLKVTAKRTNIPGMKQYRPRRSTNPYMGGLRGRTPYAAPFIYSPYGYG 182
>gi|449523199|ref|XP_004168611.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/170 (73%), Positives = 147/170 (86%), Gaps = 1/170 (0%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIY 113
+AN +L+DMKKRLK++E+EA ALREMQAKVEKEM +VQD +S +A+QA +EEVDSRS++
Sbjct: 12 DANDAELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVF 71
Query: 114 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETE 173
VGNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPKG+AYVEFVE +AVQ ALLLNE+E
Sbjct: 72 VGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESE 131
Query: 174 LHGRQLKVSAKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
LHGRQLKV+A RTNIPGMKQ+R RR N F G R R P++ F PYGYG
Sbjct: 132 LHGRQLKVTAMRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG 181
>gi|224140775|ref|XP_002323754.1| predicted protein [Populus trichocarpa]
gi|222866756|gb|EEF03887.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/166 (75%), Positives = 147/166 (88%), Gaps = 2/166 (1%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD-SSSTSATQAEKEEVDSRSIYVGNV 117
+L+DMKKRLKE+E+EA ALREMQAKVEKEMG+VQD S+S +A+QA KEEVDSRS++VGNV
Sbjct: 19 ELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPSASATASQANKEEVDSRSVFVGNV 78
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
DYACTPEEVQQHFQ+CGTVNRVTI +DK+GQPKG+AYVEFVE +AVQ ALLLNE+ELHGR
Sbjct: 79 DYACTPEEVQQHFQACGTVNRVTIRSDKYGQPKGYAYVEFVEPEAVQEALLLNESELHGR 138
Query: 178 QLKVSAKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
QLKV+AKRTN+PGMKQFR RRP+ + GF R +P F PYGYG
Sbjct: 139 QLKVTAKRTNVPGMKQFRARRPSPYMGFPPRAAIMPPYLFSPYGYG 184
>gi|334188309|ref|NP_001190511.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008656|gb|AED96039.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 265
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/261 (56%), Positives = 174/261 (66%), Gaps = 49/261 (18%)
Query: 1 MEQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDL 60
M HDEQEH+VY + + + +++ E A + E +P ++S+DL
Sbjct: 1 MPVHDEQEHEVY------GGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDL 54
Query: 61 EDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---------------------------- 92
EDMKKR+KEIEEEAGALREMQAK EK+MGA Q
Sbjct: 55 EDMKKRIKEIEEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSESMNLSR 114
Query: 93 ---------DSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 143
+ ++ + AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT
Sbjct: 115 NLLEFEYEKEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 174
Query: 144 DKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGR-RPNTF 202
DKFGQPKGFAYVEFVE++AVQN+L+LNE+ELHGRQ+KVSAKRTN+PGM+QFRGR RP
Sbjct: 175 DKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRGRP--- 231
Query: 203 GFRGRRPFIPGVPFV-PYGYG 222
FR R F+PGVPF PY YG
Sbjct: 232 -FRPMRGFMPGVPFYPPYAYG 251
>gi|224287039|gb|ACN41220.1| unknown [Picea sitchensis]
Length = 201
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 150/175 (85%), Gaps = 3/175 (1%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
D + + + D EDP K+LE+MKKRLKE+EEEA ALR+MQAKVEKEMGAVQD +
Sbjct: 3 DEMLDSQLNKDEGASEDPAV--KELEEMKKRLKEMEEEAAALRDMQAKVEKEMGAVQDPA 60
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 155
+++A+QA KEE D+RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKG+AYV
Sbjct: 61 ASAASQATKEEADTRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYV 120
Query: 156 EFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPF 210
EF+E +AVQNA+LLNE+ELHGRQLKV+AKRTN+PGMKQFRGRR + + G RP+
Sbjct: 121 EFLEAEAVQNAILLNESELHGRQLKVTAKRTNVPGMKQFRGRRFSA-PYMGYRPW 174
>gi|255647938|gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 163/211 (77%), Gaps = 19/211 (9%)
Query: 5 DEQEHDVYGGEIPDE--MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLED 62
+E+EH+VYGGEIPDE M+ DID+ + E D +A K+L++
Sbjct: 2 EEEEHEVYGGEIPDEGEMEGDIDMSAADDEAAVDD----------------DAAVKELDE 45
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MK+RLKE+EEEA ALREMQAKVEKE+G+VQD ++ +A+QA KEE D+RS++VGNVDYACT
Sbjct: 46 MKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANAAASQANKEEADARSVFVGNVDYACT 105
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQ ALLLNE+ELHGRQLKV
Sbjct: 106 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVL 165
Query: 183 AKRTNIPGMKQFRGRRPNTFGFRG-RRPFIP 212
KRTN+PGMKQ+R N + G RRP+ P
Sbjct: 166 PKRTNVPGMKQYRPSCFNPYMAYGFRRPYTP 196
>gi|168028169|ref|XP_001766601.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682246|gb|EDQ68666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 238
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 166/218 (76%), Gaps = 11/218 (5%)
Query: 6 EQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKK 65
E+EH+VYGG+IPDE++ +++VD D D + D +E SK+LE+MKK
Sbjct: 2 EEEHEVYGGDIPDEVEGELEVD-----SDGDGEDLLLKGEDVGTDE---VASKELEEMKK 53
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RLKE+EEEA ALR+MQAKVEKEMG Q + T+ QA +EE D+RS++VGNVDYACTPEE
Sbjct: 54 RLKEMEEEAAALRDMQAKVEKEMGGSQ--ALTNGDQANREEADARSVFVGNVDYACTPEE 111
Query: 126 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
VQQHFQSCGTVNRVTILTDKFG PKG+AYVEF+E++AVQNA+LL+E+ELH R +KV+AKR
Sbjct: 112 VQQHFQSCGTVNRVTILTDKFGSPKGYAYVEFLEVEAVQNAILLSESELHNRPIKVTAKR 171
Query: 186 TNIPGMKQFRGR-RPNTFGFRGRRPFIPGVPFVPYGYG 222
TN+PGMK +RGR +G+R RRPF + YG G
Sbjct: 172 TNVPGMKGYRGRPYAPYYGYRPRRPFSAPYGYASYGSG 209
>gi|357476333|ref|XP_003608452.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355509507|gb|AES90649.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 199
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 121/154 (78%), Positives = 140/154 (90%), Gaps = 2/154 (1%)
Query: 56 NSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVG 115
N DL+DMKKRLKE+E+EA AL+EMQAKVEKEMG+VQD ++ SA+Q +EEVD+RSI+VG
Sbjct: 14 NEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSVQDPANASASQINREEVDARSIFVG 73
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELH 175
NVDYACTPE+VQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFVE++AVQ ALLLNE+ELH
Sbjct: 74 NVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAVQEALLLNESELH 133
Query: 176 GRQLKVSAKRTNIPGMKQFRGRRPNT--FGFRGR 207
GRQLKV+AKRTN+PGMKQFR RRP+ GFRGR
Sbjct: 134 GRQLKVTAKRTNVPGMKQFRPRRPSNPYMGFRGR 167
>gi|388500100|gb|AFK38116.1| unknown [Medicago truncatula]
Length = 199
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/154 (77%), Positives = 139/154 (90%), Gaps = 2/154 (1%)
Query: 56 NSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVG 115
N DL+DMKKRLKE+E+EA AL+EMQAKVEKEMG++QD ++ SA+Q +EEVD+RSI+VG
Sbjct: 14 NEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSIQDPANASASQINREEVDARSIFVG 73
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELH 175
NVDYACTPE+VQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFVE++A Q ALLLNE+ELH
Sbjct: 74 NVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAAQEALLLNESELH 133
Query: 176 GRQLKVSAKRTNIPGMKQFRGRRPNT--FGFRGR 207
GRQLKV+AKRTN+PGMKQFR RRP+ GFRGR
Sbjct: 134 GRQLKVTAKRTNVPGMKQFRPRRPSNPYMGFRGR 167
>gi|255569758|ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
gi|223534848|gb|EEF36537.1| poly-A binding protein, putative [Ricinus communis]
Length = 198
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/165 (73%), Positives = 145/165 (87%), Gaps = 2/165 (1%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+L+DMKKRLKE+E+EA ALREMQAKVEKEMG+ QD ++ +A+QA +EEVDSRS++VGNVD
Sbjct: 20 ELDDMKKRLKEMEDEAAALREMQAKVEKEMGSSQDPTA-AASQANREEVDSRSVFVGNVD 78
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
Y+CTPEEVQQHFQSCGTVNR+TI TDK+GQPKG+AYVEF+E +AVQ ALLLNE+ELHGRQ
Sbjct: 79 YSCTPEEVQQHFQSCGTVNRITIRTDKYGQPKGYAYVEFLEPEAVQEALLLNESELHGRQ 138
Query: 179 LKVSAKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
LKV+AKRTN+PGMKQFR RRPN + GF R +P + PYGYG
Sbjct: 139 LKVTAKRTNVPGMKQFRPRRPNPYMGFAPRGSQLPPYFYSPYGYG 183
>gi|388498836|gb|AFK37484.1| unknown [Lotus japonicus]
Length = 200
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/149 (78%), Positives = 135/149 (90%), Gaps = 1/149 (0%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDY 119
L+DMKKRLKE+E+EA ALREMQAKVEKEMG+V D ++ SA+Q +EEVDSRS++VGNVDY
Sbjct: 21 LDDMKKRLKEMEDEAAALREMQAKVEKEMGSVPDPANASASQTNREEVDSRSVFVGNVDY 80
Query: 120 ACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQL 179
+CTPEEVQQHFQSCGTVNRVTI TDKFGQPKG+AYVEF+E++AVQ AL LNE+ELHGRQL
Sbjct: 81 SCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQEALALNESELHGRQL 140
Query: 180 KVSAKRTNIPGMKQFRGRRPNTF-GFRGR 207
KVS KRTN+PGMKQFR R PN + GFRGR
Sbjct: 141 KVSGKRTNVPGMKQFRPRAPNPYMGFRGR 169
>gi|167999063|ref|XP_001752237.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696632|gb|EDQ82970.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 156
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/161 (72%), Positives = 136/161 (84%), Gaps = 7/161 (4%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MKKRLKE+EEEA ALR+MQAKVEKEMG QDS+ TS QA +EE D+RS++VGNVDY+CT
Sbjct: 1 MKKRLKEMEEEAAALRDMQAKVEKEMGGSQDSAITSGAQANREEADARSVFVGNVDYSCT 60
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK-V 181
PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E++AVQNA+LL+E+ELH R LK V
Sbjct: 61 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNAILLSESELHNRPLKVV 120
Query: 182 SAKRTNIPGMKQFRGR-RPNTFGFRGRRPFIPGVPFVPYGY 221
++KRTN+PGMK FRGR +G+R RRPF PYGY
Sbjct: 121 TSKRTNVPGMKGFRGRPYAPYYGYRPRRPFS-----APYGY 156
>gi|224060413|ref|XP_002300187.1| predicted protein [Populus trichocarpa]
gi|222847445|gb|EEE84992.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/171 (68%), Positives = 143/171 (83%), Gaps = 2/171 (1%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRSI 112
N + +L+DMKKRLKE+E+EA AL EMQAKVEKEMG+VQD S+++A +EEVDSRS+
Sbjct: 14 NESVPELDDMKKRLKEMEDEAAALLEMQAKVEKEMGSVQDPSASAAASQANREEVDSRSV 73
Query: 113 YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNET 172
+VGNVDY+CTPEEVQQHFQ+CGT+NR+TI +DK+GQPKG+AYVEF+E + VQ ALLLNE+
Sbjct: 74 FVGNVDYSCTPEEVQQHFQACGTINRITIRSDKYGQPKGYAYVEFLEPETVQEALLLNES 133
Query: 173 ELHGRQLKVSAKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
ELHGRQLKV+ KRTN+PGMKQFR RRPN + GF R +P F PYGYG
Sbjct: 134 ELHGRQLKVTVKRTNLPGMKQFRARRPNPYMGFPPRGAPMPPYLFSPYGYG 184
>gi|302786636|ref|XP_002975089.1| hypothetical protein SELMODRAFT_102545 [Selaginella moellendorffii]
gi|300157248|gb|EFJ23874.1| hypothetical protein SELMODRAFT_102545 [Selaginella moellendorffii]
Length = 224
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 155/214 (72%), Gaps = 31/214 (14%)
Query: 6 EQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKK 65
E EH+VYGGEIP+E++ D++ D+ + + S +LE+MKK
Sbjct: 8 EDEHEVYGGEIPEEVEGDLEGDQGDDAGGD------------------DPTSTELEEMKK 49
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RLKE+E+EA ALR+MQAKVEKEMGA QD ++ + + KEE D+RS+YVGNVDY+CTPEE
Sbjct: 50 RLKEMEDEAAALRDMQAKVEKEMGAGQDPAAAAQQAS-KEEADARSVYVGNVDYSCTPEE 108
Query: 126 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E++AVQNAL+LNE+ELHGR +K R
Sbjct: 109 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNALILNESELHGRPIKARISR 168
Query: 186 TNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPY 219
TN+PG+KQ RGR GF G P++PY
Sbjct: 169 TNVPGLKQHRGRG----GF--------GAPYMPY 190
>gi|343172515|gb|AEL98961.1| polyadenylate-binding protein, partial [Silene latifolia]
Length = 213
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 155/220 (70%), Gaps = 24/220 (10%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
DE+EH+VYG +IP E D D DVD + ++DP K+L++MK
Sbjct: 2 DEEEHEVYGADIPVEGDLDADVDM------------------SAADDDPAV--KELDEMK 41
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
KRLKE+EEEA ALREMQAKVEKEMGAVQD +S +A A KEEVD+RS + + +
Sbjct: 42 KRLKEMEEEAAALREMQAKVEKEMGAVQDPAS-AADLANKEEVDARSFLLAMLIMLAPRK 100
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
+ FQSCG VNRVTILTDKFGQPKGFAYVEFVE +AVQ ALLLNE+ELHGRQLKVS K
Sbjct: 101 KSSNIFQSCGIVNRVTILTDKFGQPKGFAYVEFVEQEAVQQALLLNESELHGRQLKVSPK 160
Query: 185 RTNIPGMKQFRGRRP-NTF-GFRGRRPFIPGVPFVPYGYG 222
RTN+PG+KQFRGRR N + FR RRPF P F PYGYG
Sbjct: 161 RTNVPGLKQFRGRRGFNPYMPFRPRRPF-PSPYFNPYGYG 199
>gi|46805690|dbj|BAD17091.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|125541200|gb|EAY87595.1| hypothetical protein OsI_09006 [Oryza sativa Indica Group]
gi|215678683|dbj|BAG92338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 153/220 (69%), Gaps = 22/220 (10%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
DE+EH+VYG EIP++ D D D D + D A ++L+ MK
Sbjct: 2 DEEEHEVYGQEIPEDGDMD------------------GADVDMASGGDDAAKLQELDQMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRSIYVGNVDYACTP 123
+RLKE+EEEA ALR+MQAKV KEM SA+ AE KE+VD+RS+YVGNVDYACTP
Sbjct: 44 RRLKEMEEEAAALRDMQAKVAKEMQGGPPGGDPSASTAEAKEQVDARSVYVGNVDYACTP 103
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL LNE+ELHGRQ+KV+
Sbjct: 104 EEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVAP 163
Query: 184 KRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVP-FVPYGYG 222
KRTN+PGMKQ R N + R + G P F PYGYG
Sbjct: 164 KRTNVPGMKQRPPRGYNPYHGYPYRSY--GAPYFPPYGYG 201
>gi|194706900|gb|ACF87534.1| unknown [Zea mays]
gi|195622774|gb|ACG33217.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 153/220 (69%), Gaps = 33/220 (15%)
Query: 5 DEQEHDVYGGEIP-DEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDM 63
+++EH+VYG EIP D D D+ D ++L+DM
Sbjct: 2 EDEEHEVYGQEIPVDGEDVDMAAG------------------------DDATKLQELDDM 37
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
K+RLKE+EEEA ALREMQAKV KEM V +++TS KEE+DSRS+++GNVDYACTP
Sbjct: 38 KRRLKEMEEEAAALREMQAKVAKEMQGVDPNATTSEN---KEEMDSRSVFIGNVDYACTP 94
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQQHF SCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQ A+ LNE+ELHGRQLKV+
Sbjct: 95 EEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVAP 154
Query: 184 KRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
KRTN+PGMKQ RGR N + G RP+ + PYGYG
Sbjct: 155 KRTNVPGMKQPRGRGFNPYHGHPYMRPY----GYSPYGYG 190
>gi|115467128|ref|NP_001057163.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|51535367|dbj|BAD37238.1| putative poly(A) binding protein II [Oryza sativa Japonica Group]
gi|113595203|dbj|BAF19077.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|215704439|dbj|BAG93873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765746|dbj|BAG87443.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635211|gb|EEE65343.1| hypothetical protein OsJ_20615 [Oryza sativa Japonica Group]
Length = 204
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 156/221 (70%), Gaps = 35/221 (15%)
Query: 6 EQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKK 65
++EH+VYG EIP +D + D D D A ++L++MK+
Sbjct: 3 DEEHEVYGQEIP--LDGE--------------------DVDMGAPGDEAAKMQELDEMKR 40
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RLKE+EEEA ALREMQ KV KEM + ++S+S + KEE+D+RS+YVGNVDYACTPEE
Sbjct: 41 RLKEMEEEANALREMQTKVAKEMQGLDPNASSSES---KEEMDARSVYVGNVDYACTPEE 97
Query: 126 VQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
VQQHF SCGTVNRVTILTDKFGQPKGFAYVEF+E++AVQ A+ LNE+ELHGRQ+KV+ KR
Sbjct: 98 VQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAVKLNESELHGRQIKVAPKR 157
Query: 186 TNIPGMKQFRGRRPNTFGFRG---RRPFIPGVPFV-PYGYG 222
TN+PGMKQ RG R GF G RP+ G PF PYGYG
Sbjct: 158 TNVPGMKQPRGGR----GFGGHPYMRPY--GAPFYNPYGYG 192
>gi|115448789|ref|NP_001048174.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|46805689|dbj|BAD17090.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|113537705|dbj|BAF10088.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|215692407|dbj|BAG87827.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623708|gb|EEE57840.1| hypothetical protein OsJ_08453 [Oryza sativa Japonica Group]
Length = 212
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 153/219 (69%), Gaps = 24/219 (10%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
DE+EH+VYG EIP++ D D D D + D A ++L+ MK
Sbjct: 2 DEEEHEVYGQEIPEDGDMD------------------GADVDMASGGDDAAKLQELDQMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
+RLKE+EEEA ALR+MQAKV KEM Q +++T KE+VD+RS+YVGNVDYACTPE
Sbjct: 44 RRLKEMEEEAAALRDMQAKVAKEM---QGGDPSASTAEAKEQVDARSVYVGNVDYACTPE 100
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL LNE+ELHGRQ+KV+ K
Sbjct: 101 EVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVAPK 160
Query: 185 RTNIPGMKQFRGRRPNTFGFRGRRPFIPGVP-FVPYGYG 222
RTN+PGMKQ R N + R + G P F PYGYG
Sbjct: 161 RTNVPGMKQRPPRGYNPYHGYPYRSY--GAPYFPPYGYG 197
>gi|212722530|ref|NP_001132591.1| uncharacterized protein LOC100194063 [Zea mays]
gi|194694844|gb|ACF81506.1| unknown [Zea mays]
gi|195635091|gb|ACG37014.1| polyadenylate-binding protein 2 [Zea mays]
gi|413938966|gb|AFW73517.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 152/219 (69%), Gaps = 24/219 (10%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
DE+EH+VYG EIP++ D D D D D A ++L++MK
Sbjct: 2 DEEEHEVYGQEIPEDGDMD------------------GADVDMAASGDDAAKLQELDEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
+RLKE+EEEA ALR+MQAKV KEM Q +++T KE+VD+RS+YVGNVDYACTPE
Sbjct: 44 RRLKEMEEEAAALRDMQAKVAKEM---QGGDPSASTAEAKEQVDARSVYVGNVDYACTPE 100
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E + VQ AL LNE+ELHGRQ+KV+ K
Sbjct: 101 EVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEGVQEALNLNESELHGRQIKVAPK 160
Query: 185 RTNIPGMKQFRGRRPNTFGFRGRRPFIPGVP-FVPYGYG 222
RTN+PGMKQ R N + R + G P F PYGYG
Sbjct: 161 RTNVPGMKQRPPRGYNPYHGYPYRSY--GAPYFPPYGYG 197
>gi|242092470|ref|XP_002436725.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
gi|241914948|gb|EER88092.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
Length = 203
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 153/220 (69%), Gaps = 33/220 (15%)
Query: 5 DEQEHDVYGGEIP-DEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDM 63
+++EH+VYG EIP D D D+ D ++L++M
Sbjct: 2 EDEEHEVYGQEIPVDGEDVDMAAG------------------------DDATKLQELDEM 37
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
K+RLKE+EEEA ALREMQAKV KEM V +++TS KEE+DSRS++VGNVDYACTP
Sbjct: 38 KRRLKEMEEEAAALREMQAKVAKEMQGVDPNATTSEN---KEEMDSRSVFVGNVDYACTP 94
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQQHF SCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQ A+ LNE+ELHGRQLKV+
Sbjct: 95 EEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAVKLNESELHGRQLKVAP 154
Query: 184 KRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
KRTN+PGMKQ RGR N + G RP+ + PYGYG
Sbjct: 155 KRTNVPGMKQPRGRGFNPYHGHPYMRPY----GYSPYGYG 190
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 154/220 (70%), Gaps = 28/220 (12%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
DE+EH+VYG EIP +D D++ D + + +K+L++MK
Sbjct: 2 DEEEHEVYGQEIP--VDGDME------------------GTDVDMAAAGDDAAKELDEMK 41
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
+RLKE+EEEA ALR+MQAKV KEM Q + ++T KE+VD+RS+YVGNVDYACTPE
Sbjct: 42 RRLKEMEEEAAALRDMQAKVAKEM---QGGDANASTAEAKEQVDARSVYVGNVDYACTPE 98
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL LNE+ELHGRQ+KVS K
Sbjct: 99 EVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVSPK 158
Query: 185 RTNIPGMKQFRGRRPNTFGFRGRRPFIP-GVP-FVPYGYG 222
RTN+PGMKQ R P F P+ G P F PYGYG
Sbjct: 159 RTNVPGMKQ---RPPRGFSPYHAYPYRSYGAPYFPPYGYG 195
>gi|226509296|ref|NP_001152340.1| polyadenylate-binding protein 2 [Zea mays]
gi|195655291|gb|ACG47113.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 150/220 (68%), Gaps = 33/220 (15%)
Query: 5 DEQEHDVYGGEIP-DEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDM 63
+++EH+VYG EIP D D D+ D ++L+DM
Sbjct: 2 EDEEHEVYGQEIPVDGEDVDMAAG------------------------DDATKLQELDDM 37
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
K+RLKE+EEEA ALREMQAKV KEM V +++TS KEE+DSRS+++GNVDYACTP
Sbjct: 38 KRRLKEMEEEAAALREMQAKVAKEMQGVDPNATTSEN---KEEMDSRSVFIGNVDYACTP 94
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
V QHF SCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQ A+ LNE+ELHGRQLKV+
Sbjct: 95 XXVXQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVAP 154
Query: 184 KRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
KRTN+PGMKQ RGR N + G RP+ + PYGYG
Sbjct: 155 KRTNVPGMKQPRGRGFNPYHGHPYMRPY----GYSPYGYG 190
>gi|226532872|ref|NP_001149957.1| polyadenylate-binding protein 2 [Zea mays]
gi|195635741|gb|ACG37339.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 143/199 (71%), Gaps = 30/199 (15%)
Query: 5 DEQEHDVYGGEIP-DEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDM 63
D++EH+VYG EIP D D D+ D ++L++M
Sbjct: 2 DDEEHEVYGQEIPVDGEDVDMSAG------------------------DDATKLQELDEM 37
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
K+RLKE+EEEA ALREMQAKV K+M QD ++T T KEE+DSRS++VGNVDYACTP
Sbjct: 38 KRRLKEMEEEAAALREMQAKVAKDM---QDPNAT--TSENKEEMDSRSVFVGNVDYACTP 92
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQQHF SCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQ A+ LNE+ELHGRQLKV+
Sbjct: 93 EEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVAP 152
Query: 184 KRTNIPGMKQFRGRRPNTF 202
KRTNIPGMKQ RGR N +
Sbjct: 153 KRTNIPGMKQLRGRGFNPY 171
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/226 (57%), Positives = 155/226 (68%), Gaps = 40/226 (17%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
DE+EH+VYG EIP +D D++ D D D A K+L++MK
Sbjct: 2 DEEEHEVYGQEIP--VDGDMEGG----------------DVDMTTGGDDAA--KELDEMK 41
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
+RLKE+EEEA ALR+MQAKV KEM Q + ++T KE+VD+RS+YVGNVDYACTPE
Sbjct: 42 RRLKEMEEEAAALRDMQAKVAKEM---QGGDANASTAEAKEQVDARSVYVGNVDYACTPE 98
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL LNE+ELHGRQ+KVS K
Sbjct: 99 EVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVSPK 158
Query: 185 RTNIPGMKQFRGRRPNTFGFRGRRPFIPGVP--------FVPYGYG 222
RTN+PGMKQ RP RG P+ G P F PYGYG
Sbjct: 159 RTNVPGMKQ----RPP----RGFNPYH-GYPYRSYGAQYFPPYGYG 195
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 156/230 (67%), Gaps = 42/230 (18%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANS----KDL 60
DE+EH+VYG EIP +D D++ D D D A S ++L
Sbjct: 2 DEEEHEVYGQEIP--VDGDMEGG----------------DVDMTTGGDDAAKSFSLMQEL 43
Query: 61 EDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYA 120
++MK+RLKE+EEEA ALR+MQAKV KEM Q + ++T KE+VD+RS+YVGNVDYA
Sbjct: 44 DEMKRRLKEMEEEAAALRDMQAKVAKEM---QGGDANASTAEAKEQVDARSVYVGNVDYA 100
Query: 121 CTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
CTPEEVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL LNE+ELHGRQ+K
Sbjct: 101 CTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIK 160
Query: 181 VSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVP--------FVPYGYG 222
VS KRTN+PGMKQ RP RG P+ G P F PYGYG
Sbjct: 161 VSPKRTNVPGMKQ----RPP----RGFNPYH-GYPYRSYGAQYFPPYGYG 201
>gi|302814589|ref|XP_002988978.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
gi|300143315|gb|EFJ10007.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
Length = 178
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/157 (70%), Positives = 132/157 (84%), Gaps = 13/157 (8%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MKKRLKE+E+EA ALR+MQAKVEKEMGA QD ++ + + KEE D+RS+YVGNVDY+CT
Sbjct: 1 MKKRLKEMEDEAAALRDMQAKVEKEMGAGQDPAAAAQQAS-KEEADARSVYVGNVDYSCT 59
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E++AVQNAL+LNE+ELHGR +KV+
Sbjct: 60 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNALILNESELHGRPIKVA 119
Query: 183 AKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPY 219
AKRTN+PG+KQ RGR GF G P++PY
Sbjct: 120 AKRTNVPGLKQHRGRG----GF--------GAPYMPY 144
>gi|238006378|gb|ACR34224.1| unknown [Zea mays]
gi|413952637|gb|AFW85286.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/199 (59%), Positives = 143/199 (71%), Gaps = 30/199 (15%)
Query: 5 DEQEHDVYGGEIP-DEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDM 63
+++EH+VYG EIP D D D+ D ++L++M
Sbjct: 2 EDEEHEVYGQEIPVDGEDVDMSAG------------------------DDATKLQELDEM 37
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
K+RLKE+EEEA ALREMQAKV K+M QD ++T T KEE+DSRS++VGNVDYACTP
Sbjct: 38 KRRLKEMEEEAAALREMQAKVAKDM---QDPNAT--TSENKEEMDSRSVFVGNVDYACTP 92
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
EEVQQHF SCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQ A+ LNE+ELHGRQLKV+
Sbjct: 93 EEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVAP 152
Query: 184 KRTNIPGMKQFRGRRPNTF 202
KRTN+PGMKQ RGR N +
Sbjct: 153 KRTNVPGMKQPRGRGFNPY 171
>gi|226529568|ref|NP_001148500.1| polyadenylate-binding protein 2 [Zea mays]
gi|195619834|gb|ACG31747.1| polyadenylate-binding protein 2 [Zea mays]
gi|413924473|gb|AFW64405.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/219 (56%), Positives = 153/219 (69%), Gaps = 24/219 (10%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
D++EH+VYG EIP+ D D+D + + D A ++L++MK
Sbjct: 2 DDEEHEVYGQEIPE--DGDMDGADVDMAAAGDD----------------AAKLQELDEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
++LKE+EEEA ALR+MQAKV KEM Q + +T KE+VD+RS+YVGNVDYACTPE
Sbjct: 44 RKLKEMEEEAAALRDMQAKVAKEM---QGGDPSISTAEAKEQVDARSVYVGNVDYACTPE 100
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL LNE+ELHGRQ+KV+ K
Sbjct: 101 EVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVAPK 160
Query: 185 RTNIPGMKQFRGRRPNTFGFRGRRPFIPGVP-FVPYGYG 222
RTN+PGMKQ R N + R + G P F PYGYG
Sbjct: 161 RTNVPGMKQRPPRGYNPYHGYPYRSY--GAPYFPPYGYG 197
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 152/222 (68%), Gaps = 31/222 (13%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+++EH+VYG EIP +D + D D D A +L++MK
Sbjct: 2 EDEEHEVYGQEIP--VDGE--------------------DVDMGAAGDDAAKLHELDEMK 39
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
+RLKE+EEEA ALREMQAKV KEM Q + T KEE+DSRS++VGNVDYACTPE
Sbjct: 40 RRLKEMEEEAAALREMQAKVAKEM---QGGDPNATTSEAKEEMDSRSVFVGNVDYACTPE 96
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHF SCGTVNRVTILTDKFGQPKGFAYVEFVE +A+Q A+ L+E+ELHGRQ+KV+ K
Sbjct: 97 EVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAIQEAVKLSESELHGRQIKVAPK 156
Query: 185 RTNIPGMKQFRGRRP-NTFGFRG-RRPFIPGVPFV-PY-GYG 222
RTN+PG+KQ RG R N +G RP+ G PF PY GYG
Sbjct: 157 RTNVPGLKQPRGGRGYNPYGGHPYMRPY--GAPFFNPYGGYG 196
>gi|388491820|gb|AFK33976.1| unknown [Medicago truncatula]
Length = 170
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 122/139 (87%)
Query: 56 NSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVG 115
N DL+DMKKRLKE+E+EA AL+EMQAKVEKEMG+VQD ++ SA+Q +EEVD+RSI+VG
Sbjct: 14 NEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSVQDPANASASQINREEVDARSIFVG 73
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELH 175
NVDYACTPE+VQQHFQSCGTVNRVTI TDKFGQPKG+AYVEFVE++AVQ ALLLNE+ELH
Sbjct: 74 NVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAVQEALLLNESELH 133
Query: 176 GRQLKVSAKRTNIPGMKQF 194
GRQLKV + + K+F
Sbjct: 134 GRQLKVITTKGSCFSEKEF 152
>gi|413924475|gb|AFW64407.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 171
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 127/161 (78%), Gaps = 6/161 (3%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MK++LKE+EEEA ALR+MQAKV KEM Q + +T KE+VD+RS+YVGNVDYACT
Sbjct: 1 MKRKLKEMEEEAAALRDMQAKVAKEM---QGGDPSISTAEAKEQVDARSVYVGNVDYACT 57
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
PEEVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL LNE+ELHGRQ+KV+
Sbjct: 58 PEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVA 117
Query: 183 AKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVP-FVPYGYG 222
KRTN+PGMKQ R N + R + G P F PYGYG
Sbjct: 118 PKRTNVPGMKQRPPRGYNPYHGYPYRSY--GAPYFPPYGYG 156
>gi|334188311|ref|NP_001190512.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008657|gb|AED96040.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 142
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/126 (81%), Positives = 113/126 (89%), Gaps = 6/126 (4%)
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFV 158
+ AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFV
Sbjct: 7 VSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFV 66
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGR-RPNTFGFRGRRPFIPGVPFV 217
E++AVQN+L+LNE+ELHGRQ+KVSAKRTN+PGM+QFRGR RP FR R F+PGVPF
Sbjct: 67 EVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRGRP----FRPMRGFMPGVPFY 122
Query: 218 -PYGYG 222
PY YG
Sbjct: 123 PPYAYG 128
>gi|225462880|ref|XP_002273141.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Vitis
vinifera]
Length = 179
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 128/164 (78%), Gaps = 18/164 (10%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDY 119
+ED+ +RL+++ EE + K +M +VQ +A QA +EEVDSRS++VGNVDY
Sbjct: 18 IEDLNQRLEQMMEE-------KPKAHNDMPSVQ-----AAAQASREEVDSRSVFVGNVDY 65
Query: 120 ACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQL 179
+CTPEEVQQHFQ+CGTVNRVTI ++K+GQPKG+AYVEF+E +AVQ ALLLNE+ELHGRQL
Sbjct: 66 SCTPEEVQQHFQACGTVNRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLNESELHGRQL 125
Query: 180 KVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFV-PYGYG 222
KVSAKRTN+PG+KQFR RR GFR R +P P++ PYGYG
Sbjct: 126 KVSAKRTNVPGLKQFRPRR---VGFRSRSTHMP--PYLCPYGYG 164
>gi|225462878|ref|XP_002273112.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Vitis
vinifera]
Length = 186
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 129/165 (78%), Gaps = 13/165 (7%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD--SSSTSATQAEKEEVDSRSIYVGNV 117
+ED+ +RL+++ EE + K +M +VQD +++ +A QA +EEVDSRS++VGNV
Sbjct: 18 IEDLNQRLEQMMEE-------KPKAHNDMPSVQDPAAAAAAAAQASREEVDSRSVFVGNV 70
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
DY+CTPEEVQQHFQ+CGTVNRVTI ++K+GQPKG+AYVEF+E +AVQ ALLLNE+ELHGR
Sbjct: 71 DYSCTPEEVQQHFQACGTVNRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLNESELHGR 130
Query: 178 QLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 222
QLKVSAKRTN+PG+KQFR RR GFR R +P PYGYG
Sbjct: 131 QLKVSAKRTNVPGLKQFRPRR---VGFRSRSTHMPPY-LCPYGYG 171
>gi|218197814|gb|EEC80241.1| hypothetical protein OsI_22184 [Oryza sativa Indica Group]
Length = 230
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/244 (50%), Positives = 145/244 (59%), Gaps = 55/244 (22%)
Query: 6 EQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKK 65
++EH+VYG EIP +D + D D D A ++L++MK+
Sbjct: 3 DEEHEVYGQEIP--LDGE--------------------DVDMGAPGDEAAKMQELDEMKR 40
Query: 66 RLKEIEEEAGALREMQAKVEKEMGA----VQDSSSTSA---------------TQAEKEE 106
RLKE+EEEA ALREMQ KV KEM V SS A +
Sbjct: 41 RLKEMEEEANALREMQTKVAKEMQGCNLLVLISSLNLADCVDVLQNVISFHQSVNPSTND 100
Query: 107 VDSRS----IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDA 162
V RS + VDYACTPEEVQQHF SCGTVNRVTILTDKFGQPKGFAYVEF+E++A
Sbjct: 101 VSLRSWHRVMIAQRVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLEVEA 160
Query: 163 VQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRG---RRPFIPGVPFV-P 218
VQ A+ LNE+ELHGRQ+KV+ KRTN+PGMKQ RG R GF G RP+ G PF P
Sbjct: 161 VQEAVKLNESELHGRQIKVAPKRTNVPGMKQPRGGR----GFGGHPYMRPY--GAPFYNP 214
Query: 219 YGYG 222
YGYG
Sbjct: 215 YGYG 218
>gi|296087478|emb|CBI34067.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 129/165 (78%), Gaps = 13/165 (7%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD--SSSTSATQAEKEEVDSRSIYVGNV 117
+ED+ +RL+++ EE + K +M +VQD +++ +A QA +EEVDSRS++VGNV
Sbjct: 12 IEDLNQRLEQMMEE-------KPKAHNDMPSVQDPAAAAAAAAQASREEVDSRSVFVGNV 64
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
DY+CTPEEVQQHFQ+CGTVNRVTI ++K+GQPKG+AYVEF+E +AVQ ALLLNE+ELHGR
Sbjct: 65 DYSCTPEEVQQHFQACGTVNRVTIRSNKYGQPKGYAYVEFLETEAVQEALLLNESELHGR 124
Query: 178 QLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 222
QLKVSAKRTN+PG+KQFR RR GFR R +P PYGYG
Sbjct: 125 QLKVSAKRTNVPGLKQFRPRR---VGFRSRSTHMPPY-LCPYGYG 165
>gi|242035047|ref|XP_002464918.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
gi|241918772|gb|EER91916.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
Length = 209
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/163 (58%), Positives = 116/163 (71%), Gaps = 16/163 (9%)
Query: 40 EHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV-----QDS 94
E +H + E +++E+M++RL+E+E K+E E+ +
Sbjct: 30 ETDHPSAVELRASLYTRDQEIEEMRRRLRELE-----------KLEFEIPPAPSHEEESE 78
Query: 95 SSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAY 154
++ +AT +K EVD RSIYVGNVDYAC+PEEVQQHFQ CGT+NRVTILTD FGQPKGFAY
Sbjct: 79 TAVAATTVDKAEVDVRSIYVGNVDYACSPEEVQQHFQFCGTINRVTILTDSFGQPKGFAY 138
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGR 197
VEF E++AVQNALLLNETELHGR LKV KRTNIPGMKQ RGR
Sbjct: 139 VEFDEVEAVQNALLLNETELHGRPLKVCPKRTNIPGMKQSRGR 181
>gi|195637520|gb|ACG38228.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 137/219 (62%), Gaps = 42/219 (19%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
D++EH+VYG EIP+ D D+D + + D A ++L++MK
Sbjct: 2 DDEEHEVYGQEIPE--DGDMDGADVDMAAAGDD----------------AAKLQELDEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
++LKE+ Q + +T KE+VD+RS+YVGNVDYACTPE
Sbjct: 44 RKLKEM---------------------QGCDPSISTAEAKEQVDARSVYVGNVDYACTPE 82
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL LNE+ELHGRQ+KV+ K
Sbjct: 83 EVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVAPK 142
Query: 185 RTNIPGMKQFRGRRPNTFGFRGRRPFIPGVP-FVPYGYG 222
RTN+PGMKQ R N + R + G P F PYGYG
Sbjct: 143 RTNVPGMKQRPPRGYNPYHGYPYRSY--GAPYFPPYGYG 179
>gi|413936733|gb|AFW71284.1| hypothetical protein ZEAMMB73_459562 [Zea mays]
Length = 228
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 114/152 (75%), Gaps = 6/152 (3%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDY 119
L D+ L + E+ + A ++ + +K + S+ + T KEE+DSRS++VGNVDY
Sbjct: 74 LADIPVNLPQ-EDISMARVAIKQRPQKNFHGMNSSNPNATTSENKEEMDSRSVFVGNVDY 132
Query: 120 ACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQL 179
ACTPEEVQQHF SCGTVNRVTILTDKFGQPKGFAYVEFVE++AVQ A+ LNE+ELHGRQL
Sbjct: 133 ACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQL 192
Query: 180 KVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFI 211
KV+ KRTN+PGMKQ RGR GF RP++
Sbjct: 193 KVAPKRTNVPGMKQPRGR-----GFNPYRPYV 219
>gi|413924471|gb|AFW64403.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 137/219 (62%), Gaps = 42/219 (19%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
D++EH+VYG EIP+ D D+D + + D A ++L++MK
Sbjct: 2 DDEEHEVYGQEIPE--DGDMDGADVDMAAAGDD----------------AAKLQELDEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
++LKE+E + +T KE+VD+RS+YVGNVDYACTPE
Sbjct: 44 RKLKEME---------------------GGDPSISTAEAKEQVDARSVYVGNVDYACTPE 82
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
EVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL LNE+ELHGRQ+KV+ K
Sbjct: 83 EVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIKVAPK 142
Query: 185 RTNIPGMKQFRGRRPNTFGFRGRRPFIPGVP-FVPYGYG 222
RTN+PGMKQ R N + R + G P F PYGYG
Sbjct: 143 RTNVPGMKQRPPRGYNPYHGYPYRSY--GAPYFPPYGYG 179
>gi|296087007|emb|CBI33270.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 96/107 (89%), Gaps = 1/107 (0%)
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHG 176
VDYACTPEEVQQHFQSCGTVNRVTILTDK+GQPKGFAYVEF+E++AVQ ALLLNE+ELHG
Sbjct: 24 VDYACTPEEVQQHFQSCGTVNRVTILTDKYGQPKGFAYVEFLEVEAVQEALLLNESELHG 83
Query: 177 RQLKVSAKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
RQLKV AKRTN+PGMKQFR RR N + G+R RRP++P + PYGYG
Sbjct: 84 RQLKVLAKRTNVPGMKQFRPRRFNPYMGYRFRRPYVPPYFYSPYGYG 130
>gi|359497541|ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
vinifera]
Length = 130
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 96/107 (89%), Gaps = 1/107 (0%)
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHG 176
VDYACTPEEVQQHFQSCGTVNRVTILTDK+GQPKGFAYVEF+E++AVQ ALLLNE+ELHG
Sbjct: 9 VDYACTPEEVQQHFQSCGTVNRVTILTDKYGQPKGFAYVEFLEVEAVQEALLLNESELHG 68
Query: 177 RQLKVSAKRTNIPGMKQFRGRRPNTF-GFRGRRPFIPGVPFVPYGYG 222
RQLKV AKRTN+PGMKQFR RR N + G+R RRP++P + PYGYG
Sbjct: 69 RQLKVLAKRTNVPGMKQFRPRRFNPYMGYRFRRPYVPPYFYSPYGYG 115
>gi|307107787|gb|EFN56029.1| hypothetical protein CHLNCDRAFT_13079, partial [Chlorella
variabilis]
Length = 132
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/134 (65%), Positives = 103/134 (76%), Gaps = 2/134 (1%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+LE MK RL ++E+EA L+EMQ K +KE G S A A KEE DSRS+YVGNVD
Sbjct: 1 ELEAMKARLADMEKEAAKLKEMQDKAQKEAGIAPGGPSVDA--AAKEEADSRSVYVGNVD 58
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
Y+CTPEE+Q HFQSCGTVNRVTILTDK G PKGFAY+EF+E DAV NA LL+ +EL R
Sbjct: 59 YSCTPEELQMHFQSCGTVNRVTILTDKMGNPKGFAYIEFLEADAVTNACLLDGSELRNRA 118
Query: 179 LKVSAKRTNIPGMK 192
+KVS KRTN+PGMK
Sbjct: 119 IKVSPKRTNVPGMK 132
>gi|303280321|ref|XP_003059453.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459289|gb|EEH56585.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 178
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/123 (69%), Positives = 103/123 (83%), Gaps = 3/123 (2%)
Query: 70 IEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQH 129
+E+EA LR+MQAKVE+EM + + +A +EE DSRSI+VG VDYACTPEE+Q H
Sbjct: 1 MEDEANKLRDMQAKVEEEMNTIPGGAEANAN---REEADSRSIHVGGVDYACTPEELQMH 57
Query: 130 FQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
FQSCGTVNRVTILTDK+ PKGFAYVEF+E DAV NALLLN+TE+HGR++KVSAKRTN+P
Sbjct: 58 FQSCGTVNRVTILTDKYENPKGFAYVEFLEADAVANALLLNDTEVHGRKIKVSAKRTNVP 117
Query: 190 GMK 192
GMK
Sbjct: 118 GMK 120
>gi|414868203|tpg|DAA46760.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 306
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 94/113 (83%), Gaps = 5/113 (4%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF 157
+ T KEE+DSR ++VGNVDYACTPEEVQQHF SCG VNRVTILTDKFGQPKGFAYVEF
Sbjct: 189 ATTSENKEEMDSRLVFVGNVDYACTPEEVQQHFNSCGIVNRVTILTDKFGQPKGFAYVEF 248
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPF 210
VE++AVQ A+ LNE+ELHGRQLKV+ KRTNIPGMKQ RGR GF RP+
Sbjct: 249 VEVEAVQEAIKLNESELHGRQLKVALKRTNIPGMKQPRGR-----GFNQYRPY 296
>gi|414868204|tpg|DAA46761.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 261
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 94/113 (83%), Gaps = 5/113 (4%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF 157
+ T KEE+DSR ++VGNVDYACTPEEVQQHF SCG VNRVTILTDKFGQPKGFAYVEF
Sbjct: 144 ATTSENKEEMDSRLVFVGNVDYACTPEEVQQHFNSCGIVNRVTILTDKFGQPKGFAYVEF 203
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPF 210
VE++AVQ A+ LNE+ELHGRQLKV+ KRTNIPGMKQ RGR GF RP+
Sbjct: 204 VEVEAVQEAIKLNESELHGRQLKVALKRTNIPGMKQPRGR-----GFNQYRPY 251
>gi|159476716|ref|XP_001696457.1| poly(A) binding protein [Chlamydomonas reinhardtii]
gi|158282682|gb|EDP08434.1| poly(A) binding protein [Chlamydomonas reinhardtii]
Length = 136
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 107/136 (78%), Gaps = 2/136 (1%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQA--KVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGN 116
+L+ +K++LKE+EEEA ++ + + +++ + T+AEK EVDSRSI+VGN
Sbjct: 1 ELDALKRKLKEMEEEAARVKALSVSPRSPGGAAGAAAAAAQAQTEAEKAEVDSRSIFVGN 60
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHG 176
VDY CTPEE+QQHF SCGTVNRVTILTDKFG PK FAYVEF+E+DAV NA+LL+ +EL G
Sbjct: 61 VDYGCTPEELQQHFASCGTVNRVTILTDKFGNPKAFAYVEFLEVDAVNNAVLLDNSELRG 120
Query: 177 RQLKVSAKRTNIPGMK 192
RQ+KVS KRTN+PG+K
Sbjct: 121 RQIKVSHKRTNVPGLK 136
>gi|384244690|gb|EIE18189.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 210
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 113/171 (66%), Gaps = 11/171 (6%)
Query: 22 ADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQ 81
A+ID E + HD E +AN+ +LE MK RL ++E EA LRE Q
Sbjct: 2 AEIDFQAGELDGVEGGSGVGSHD------EHADANA-ELEAMKARLAQMEAEANKLREQQ 54
Query: 82 AKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 141
K E D A A +E+ D+RS+YVG VDYACTPEE+Q HFQSCGTVNRVTI
Sbjct: 55 GKGEDSTLGRTDG----ADAALREDADNRSVYVGQVDYACTPEELQMHFQSCGTVNRVTI 110
Query: 142 LTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK 192
LTDKFG PKG+AY+EF+E DAV NALLL+ +EL GR+LKV KRTN+PG+K
Sbjct: 111 LTDKFGNPKGYAYIEFLETDAVANALLLDSSELRGRELKVLPKRTNVPGLK 161
>gi|328768093|gb|EGF78140.1| hypothetical protein BATDEDRAFT_91010 [Batrachochytrium
dendrobatidis JAM81]
Length = 182
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 118/172 (68%), Gaps = 24/172 (13%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
K++E MKKR+KE+EEEA L+EMQA+VEKEMGA + ++KEEVD RS+Y+GNV
Sbjct: 25 KEIETMKKRVKEMEEEAAKLKEMQAEVEKEMGA--------QSVSDKEEVDFRSVYIGNV 76
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY+ TPEE+Q HFQSCGT+NRVTIL DKF G PKGFAY+EF + +V NA++L+E+ G
Sbjct: 77 DYSATPEEIQAHFQSCGTINRVTILCDKFTGHPKGFAYLEFADAGSVANAVVLSESMFKG 136
Query: 177 RQLKVSAKRTNIPGMKQFRGRRPNTFG---------FRGRRPFIPGVPFVPY 219
R +KV+AKRTN+ RGRR + +R RR F + PY
Sbjct: 137 RLIKVTAKRTNVHAFYS-RGRRASRGFRGGFRGRAPYRSRRGF-----YSPY 182
>gi|334187575|ref|NP_001190273.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004147|gb|AED91530.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 128
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/108 (75%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELH 175
+VDYACTPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEFVE++AVQ AL LNE+ELH
Sbjct: 6 HVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELH 65
Query: 176 GRQLKVSAKRTNIPGMKQFR-GRRPNTFGFRGRRPFIPGVPFVPYGYG 222
GRQLKVS KRTN+PGMKQ+ GR + G+R RRPF+P + PYGYG
Sbjct: 66 GRQLKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYG 113
>gi|342887594|gb|EGU87076.1| hypothetical protein FOXB_02470 [Fusarium oxysporum Fo5176]
Length = 205
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 116/165 (70%), Gaps = 15/165 (9%)
Query: 28 EHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKE 87
EHE +HD +HD+EHE + E A +++ MK+R+ E+EEEA LREMQA +E++
Sbjct: 14 EHEIDHDREHDNEHE-----QGTEMSGAEEEEITAMKRRVAEMEEEAKKLREMQATLEQQ 68
Query: 88 MGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF- 146
+ D +KE +D+RSI+VGNVDY+ +PE++Q HFQSCG++NRVTIL DKF
Sbjct: 69 SADLAD---------DKESIDARSIFVGNVDYSASPEDIQSHFQSCGSINRVTILLDKFT 119
Query: 147 GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
GQPKG+AYVEF E V AL+LNE+ GR +KV+ KRTN+PGM
Sbjct: 120 GQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKVTPKRTNVPGM 164
>gi|164662126|ref|XP_001732185.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
gi|159106087|gb|EDP44971.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
Length = 215
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 118/171 (69%), Gaps = 4/171 (2%)
Query: 22 ADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQ 81
A++ +E E D H++ E+D NE E +A D+E MK+R+ E+E EA LREM
Sbjct: 8 AEVGAEEPHREADFAHEY-LENDVANEGRE-ADAEDADIEAMKRRVAEMEAEAAKLREMN 65
Query: 82 AKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 141
E+++ S+++ ++ EK EVD RSIYVGNVDY TPEE+QQHFQSCGT+NRVTI
Sbjct: 66 EVAERDISGTA-SAASHPSEEEKMEVDGRSIYVGNVDYGATPEEIQQHFQSCGTINRVTI 124
Query: 142 LTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
L DKF G PKGFAYVEF + V+NA +LNE+ GR LKV+ KRTN+PG+
Sbjct: 125 LCDKFTGHPKGFAYVEFADSSFVENAAVLNESLFRGRLLKVTPKRTNVPGI 175
>gi|302829278|ref|XP_002946206.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
gi|300269021|gb|EFJ53201.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
Length = 242
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 105/147 (71%), Gaps = 12/147 (8%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQA------------KVEKEMGAVQDSSSTSATQAEKE 105
+DL+ +K+RLK++EEEA ++ + A + + +A EK
Sbjct: 38 RDLDALKRRLKDMEEEAARIKALAGVATDGAAAGTSGAANGAAAAAAAAVAAAAADVEKA 97
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQN 165
E+DSRSIYVGNVDY CTPEE+QQHF CGTVNRVTILTDKFG PKG+AYVEF+E+DAVQN
Sbjct: 98 EIDSRSIYVGNVDYGCTPEELQQHFAQCGTVNRVTILTDKFGNPKGYAYVEFLEVDAVQN 157
Query: 166 ALLLNETELHGRQLKVSAKRTNIPGMK 192
A+LL+ +EL GRQLKV KRTN+PG+K
Sbjct: 158 AVLLDNSELRGRQLKVLQKRTNVPGLK 184
>gi|320168622|gb|EFW45521.1| RNP domain-containing protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/143 (59%), Positives = 107/143 (74%), Gaps = 12/143 (8%)
Query: 50 EEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDS 109
EEDP DLE +K+++ E+EEEA LREMQA VE+++G S+ A KE++D+
Sbjct: 45 EEDP-----DLEAVKQKVAEMEEEAKKLREMQADVERQLGVAGLSA------ASKEDIDA 93
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL 168
RS++VGNVDY+ TPEEVQ HF SCGTVNRVTIL DK+ G PKGFAY+EF + DAV NA+
Sbjct: 94 RSVFVGNVDYSSTPEEVQAHFASCGTVNRVTILVDKYTGHPKGFAYLEFADKDAVNNAMS 153
Query: 169 LNETELHGRQLKVSAKRTNIPGM 191
LN+T GRQLKV+ KRTN+P M
Sbjct: 154 LNDTVFRGRQLKVTPKRTNVPFM 176
>gi|408396974|gb|EKJ76125.1| hypothetical protein FPSE_03600 [Fusarium pseudograminearum CS3096]
Length = 207
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 115/172 (66%), Gaps = 10/172 (5%)
Query: 21 DADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREM 80
D I D+ E H+ DH+ EHD + E +++ MK+R+ E+EEEA LREM
Sbjct: 3 DLGIQNDKPMVEDQHEIDHDREHDEQEQGTEMSATEEEEITAMKRRVAEMEEEAKKLREM 62
Query: 81 QAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 140
QA +E++ + D +KE +D+RSI+VGNVDY+ +PE++Q HFQSCG++NRVT
Sbjct: 63 QATLEQQSAELAD---------DKESIDARSIFVGNVDYSASPEDIQGHFQSCGSINRVT 113
Query: 141 ILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
IL DKF GQPKG+AYVEF E V AL+LNE+ GR +KV+ KRTN+PGM
Sbjct: 114 ILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESMFKGRSIKVTPKRTNVPGM 165
>gi|46137511|ref|XP_390447.1| hypothetical protein FG10271.1 [Gibberella zeae PH-1]
Length = 208
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 115/166 (69%), Gaps = 15/166 (9%)
Query: 27 DEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEK 86
++HE +HD +HD E E + E+ +++ MK+R+ E+EEEA LREMQA +E+
Sbjct: 15 NQHEIDHDREHDEEQEQGTEMSATEE-----EEITAMKRRVAEMEEEAKKLREMQATLEQ 69
Query: 87 EMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF 146
+ + D +KE +D+RSI+VGNVDY+ +PE++Q HFQSCG++NRVTIL DKF
Sbjct: 70 QSAELAD---------DKESIDARSIFVGNVDYSASPEDIQGHFQSCGSINRVTILLDKF 120
Query: 147 -GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
GQPKG+AYVEF E V AL+LNE+ GR +KV+ KRTN+PGM
Sbjct: 121 TGQPKGYAYVEFTEPSLVAQALVLNESMFKGRSIKVTPKRTNVPGM 166
>gi|340939483|gb|EGS20105.1| putative poly(A) binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 112/165 (67%), Gaps = 16/165 (9%)
Query: 26 VDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVE 85
V++ E HD DH DAD+ NEE+ ++ MK+R+ E+E EA LREMQA ++
Sbjct: 5 VEDREKPHDETRDHADGTDADDANEEE------EISAMKRRVAEMEAEAAKLREMQASLD 58
Query: 86 KEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 145
+ + + +KEEVDSRSI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DK
Sbjct: 59 QARADLTE---------DKEEVDSRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDK 109
Query: 146 F-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
F GQPKG+AYVEF E V AL+LN++ GR +KV+ KRTNIP
Sbjct: 110 FTGQPKGYAYVEFAEPSLVAQALVLNDSVFKGRNIKVAPKRTNIP 154
>gi|343427618|emb|CBQ71145.1| related to poly(a) binding protein II [Sporisorium reilianum SRZ2]
Length = 208
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 107/169 (63%), Gaps = 16/169 (9%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSKD----------LEDMKKRLKEIEEEAGALREMQAK 83
D H E D N + D +A D +E MK+R+ E+E EA LRE+Q
Sbjct: 17 DLHQTHSTEMDGANASVTDASAAGADGTAMTDEDAEIEAMKQRVAEMEAEAAKLRELQ-- 74
Query: 84 VEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 143
+ + T+ E+EEVDSRSIYVGNVDY TPEEVQQHFQSCGT+NRVTIL
Sbjct: 75 ---QAAGEAGGAGLHPTEEEREEVDSRSIYVGNVDYGATPEEVQQHFQSCGTINRVTILC 131
Query: 144 DKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
DKF G PKGFAYVEF + V NA++LNE+ GR +KV+AKRTN+PGM
Sbjct: 132 DKFTGHPKGFAYVEFADPSLVANAMVLNESLFRGRLIKVTAKRTNMPGM 180
>gi|322711381|gb|EFZ02954.1| putative rrm-type rna binding protein [Metarhizium anisopliae ARSEF
23]
Length = 196
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 111/160 (69%), Gaps = 11/160 (6%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSKD-LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ 92
+H D A++E E + +A ++ + MK+R+ E+EEEA LREMQA +E++ +
Sbjct: 5 NHKEDKPAAQSAEHEQETEVSAGEEEEITAMKRRVAEMEEEAKKLREMQATLEQQSADLA 64
Query: 93 DSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKG 151
D +KE VD+RSI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG
Sbjct: 65 D---------DKESVDARSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKG 115
Query: 152 FAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+AYVEF E V AL+LNE+ GR +KV+ KRTN+PGM
Sbjct: 116 YAYVEFTEPSLVAQALILNESVFKGRNIKVTPKRTNVPGM 155
>gi|322694379|gb|EFY86210.1| putative rrm-type rna binding protein [Metarhizium acridum CQMa
102]
Length = 196
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 111/160 (69%), Gaps = 11/160 (6%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSKD-LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ 92
+H D A++E E + +A ++ + MK+R+ E+EEEA LREMQA +E++ +
Sbjct: 5 NHKEDKPAAQSAEHERETEVSAGEEEEITAMKRRVAEMEEEAKKLREMQATLEQQSADLA 64
Query: 93 DSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKG 151
D +KE VD+RSI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG
Sbjct: 65 D---------DKESVDARSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKG 115
Query: 152 FAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+AYVEF E V AL+LNE+ GR +KV+ KRTN+PGM
Sbjct: 116 YAYVEFTEPSLVAQALILNESVFKGRNIKVTPKRTNVPGM 155
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 115/174 (66%), Gaps = 12/174 (6%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV--QDSSSTSATQAEKEEVD 108
EDP D+E + R+KEIEEEA +R+MQ+ VEK+M ++S + A+ +K E D
Sbjct: 35 EDP-----DMEALTNRMKEIEEEAQLIRQMQSDVEKQMNMSTGSNTSQSVASIEDKIEAD 89
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
SRS+YVGNVDY T EE++ HF CG+VNRVTILTDKF G PKGFAY+EF + +AVQ AL
Sbjct: 90 SRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTAL 149
Query: 168 LLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGY 221
L+E+ GRQ+KV AKRTN PG+ R P T G G R V ++ GY
Sbjct: 150 ALDESLFRGRQIKVCAKRTNRPGVST-TNRPPRTRGRGGTRVI---VKYIYAGY 199
>gi|440636403|gb|ELR06322.1| hypothetical protein GMDG_07913 [Geomyces destructans 20631-21]
Length = 209
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 105/147 (71%), Gaps = 16/147 (10%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKE 105
D NEE+ ++ MK+R+ E+EEEA LREMQA ++++ + D +KE
Sbjct: 18 DETNEEE------EISAMKRRVAEMEEEAAKLREMQASLDQQSSEMHD---------DKE 62
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQ 164
++DSRSI+VGNVDYA +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E +V
Sbjct: 63 DIDSRSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPASVA 122
Query: 165 NALLLNETELHGRQLKVSAKRTNIPGM 191
AL+LNE+ GR LKV KRTNIPGM
Sbjct: 123 QALVLNESLFRGRNLKVDPKRTNIPGM 149
>gi|255074381|ref|XP_002500865.1| predicted protein [Micromonas sp. RCC299]
gi|226516128|gb|ACO62123.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/143 (55%), Positives = 106/143 (74%), Gaps = 2/143 (1%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSR 110
ED + S +LE+MKKRL +EEEA L++ + +M +S + + + SR
Sbjct: 25 EDDDEESAELEEMKKRLAAMEEEAQKLKDEANAIGDDMNTGDGASGAADADRAEAD--SR 82
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLN 170
S++VG VDYA TPEE+ +HF++CGTVNRVTILTDK+ PKGFAYVEF+E DAVQNA+ L
Sbjct: 83 SVHVGGVDYATTPEELAKHFEACGTVNRVTILTDKYDNPKGFAYVEFLEADAVQNAIKLT 142
Query: 171 ETELHGRQLKVSAKRTNIPGMKQ 193
+TE+HGR+L+VSAKRTN+PGMKQ
Sbjct: 143 DTEIHGRKLRVSAKRTNVPGMKQ 165
>gi|440461571|gb|ELQ32355.1| polyadenylate-binding protein 2 [Magnaporthe oryzae Y34]
gi|440489256|gb|ELQ68921.1| polyadenylate-binding protein 2 [Magnaporthe oryzae P131]
Length = 213
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 99/141 (70%), Gaps = 9/141 (6%)
Query: 52 DPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS 111
D +++ MKKR+ E+EEEA LREMQA + DS S + +++VDSRS
Sbjct: 43 DAACTQQEISAMKKRVAEMEEEAAKLREMQASL--------DSQSQELSTESRDDVDSRS 94
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLN 170
I+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DKF GQPKGFAYVEF E V AL+LN
Sbjct: 95 IFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQALVLN 154
Query: 171 ETELHGRQLKVSAKRTNIPGM 191
E+ GR +KVS KRTN PGM
Sbjct: 155 ESVFKGRNIKVSPKRTNYPGM 175
>gi|71013016|ref|XP_758548.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
gi|46098206|gb|EAK83439.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
Length = 204
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 98/135 (72%), Gaps = 6/135 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++E MK+R+ E+E EA LRE+Q + + T+ E+EEVDSRSIYVGNVD
Sbjct: 49 EIEAMKQRVAEMEAEAAKLRELQ-----QAAGEAGGAGLHPTEEEREEVDSRSIYVGNVD 103
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y TPEEVQQHFQSCGT+NRVTIL DKF G PKGFAYVEF E V NA++LNE+ GR
Sbjct: 104 YGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFAEPSLVANAMVLNESLFRGR 163
Query: 178 QLKVSAKRTNIPGMK 192
+KV+AKRTN+PG+
Sbjct: 164 LIKVTAKRTNMPGLS 178
>gi|429860717|gb|ELA35441.1| rnp domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 218
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 118/174 (67%), Gaps = 13/174 (7%)
Query: 23 DIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLED----MKKRLKEIEEEAGALR 78
D VD+H E++ D E+ HD ++ + A +E+ MK+R+ E+EEEA LR
Sbjct: 8 DKPVDDHSAENNSVADDENNHDEVRKDNKPSTALRLRVEEEISAMKRRVAEMEEEAAKLR 67
Query: 79 EMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNR 138
EMQA + ++ QD ++ +K++VDSRSI+VGNVDY+ +PEE+Q HFQSCG++NR
Sbjct: 68 EMQASLNQQ---AQDLNTD-----DKQDVDSRSIFVGNVDYSASPEEIQAHFQSCGSINR 119
Query: 139 VTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
VTIL DKF GQPKG+AYVEF E V AL+LNE+ GR +KV KRTN+PGM
Sbjct: 120 VTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESIFKGRNIKVVPKRTNVPGM 173
>gi|345561633|gb|EGX44721.1| hypothetical protein AOL_s00188g59 [Arthrobotrys oligospora ATCC
24927]
Length = 204
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 111/164 (67%), Gaps = 17/164 (10%)
Query: 30 EHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMG 89
+HE+ + HD D +EE+ +A MKKR+ E+E EA LREMQA ++KE
Sbjct: 3 DHENLPTAEQMDTHDEDGNDEEEISA-------MKKRMAEMEAEAQKLREMQANLDKEND 55
Query: 90 AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQ 148
+++ +KEE+D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF GQ
Sbjct: 56 NLKE---------DKEEIDARSIFVGNVDYGASPEEIQTHFQSCGSINRVTILLDKFTGQ 106
Query: 149 PKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK 192
PKG+AYVEF E V AL+LNE+ GR LKV KRTNIPGM+
Sbjct: 107 PKGYAYVEFAEPSLVAQALVLNESIFRGRALKVVPKRTNIPGMQ 150
>gi|389635639|ref|XP_003715472.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
gi|351647805|gb|EHA55665.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
Length = 193
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 97/134 (72%), Gaps = 9/134 (6%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++ MKKR+ E+EEEA LREMQA + DS S + +++VDSRSI+VGNVD
Sbjct: 30 EISAMKKRVAEMEEEAAKLREMQASL--------DSQSQELSTESRDDVDSRSIFVGNVD 81
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y+ +PEE+Q HFQSCG++NRVTIL DKF GQPKGFAYVEF E V AL+LNE+ GR
Sbjct: 82 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQALVLNESVFKGR 141
Query: 178 QLKVSAKRTNIPGM 191
+KVS KRTN PGM
Sbjct: 142 NIKVSPKRTNYPGM 155
>gi|405978177|gb|EKC42587.1| Polyadenylate-binding protein 2 [Crassostrea gigas]
Length = 244
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 123/182 (67%), Gaps = 12/182 (6%)
Query: 22 ADIDVDEHEHEHDHDHDHEHEHDA----------DNENEEDPNANSKDLEDMKKRLKEIE 71
A+ID + + + DH++D+E +++A DN +D A+ +LE +K R++E+E
Sbjct: 2 AEIDNETEQFQDDHENDNEFDNEAQLLESGEVEGDNGVADDSTADDPELEAIKARVREME 61
Query: 72 EEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRSIYVGNVDYACTPEEVQQHF 130
EEA L+EMQ +V+ +M ++++ AE K + D+RS+YVGNVDY T EE++QHF
Sbjct: 62 EEAEKLKEMQKEVDTQMNLTSPTTASPFPSAEEKMDADARSVYVGNVDYGATAEELEQHF 121
Query: 131 QSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
CG+VNRVTIL DKF G PKGFAYVEF + D+V A L+E+ GRQ+KVSAKRTN P
Sbjct: 122 HGCGSVNRVTILCDKFTGHPKGFAYVEFADKDSVTTAQALDESLFRGRQIKVSAKRTNRP 181
Query: 190 GM 191
G+
Sbjct: 182 GI 183
>gi|358391874|gb|EHK41278.1| hypothetical protein TRIATDRAFT_169914, partial [Trichoderma
atroviride IMI 206040]
Length = 167
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 100/134 (74%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+++ MK+R+ E+EEEA LREMQA +E++ + D +KE VD+RSI+VGNVD
Sbjct: 2 EIQAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVD 52
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y+ +PEEVQ HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR
Sbjct: 53 YSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 112
Query: 178 QLKVSAKRTNIPGM 191
+KV+ KRTNIPGM
Sbjct: 113 NIKVTPKRTNIPGM 126
>gi|340520405|gb|EGR50641.1| predicted protein [Trichoderma reesei QM6a]
Length = 168
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 100/134 (74%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+++ MK+R+ E+EEEA LREMQA +E++ + D +KE VD+RSI+VGNVD
Sbjct: 2 EIQAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVD 52
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y+ +PEEVQ HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR
Sbjct: 53 YSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 112
Query: 178 QLKVSAKRTNIPGM 191
+KV+ KRTNIPGM
Sbjct: 113 NIKVTPKRTNIPGM 126
>gi|358378925|gb|EHK16606.1| hypothetical protein TRIVIDRAFT_19040, partial [Trichoderma virens
Gv29-8]
Length = 171
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 100/134 (74%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+++ MK+R+ E+EEEA LREMQA +E++ + D +KE VD+RSI+VGNVD
Sbjct: 2 EIQAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESVDARSIFVGNVD 52
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y+ +PEEVQ HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR
Sbjct: 53 YSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 112
Query: 178 QLKVSAKRTNIPGM 191
+KV+ KRTNIPGM
Sbjct: 113 NIKVTPKRTNIPGM 126
>gi|440800318|gb|ELR21357.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 195
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 108/147 (73%), Gaps = 8/147 (5%)
Query: 44 DADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE 103
+A E E A +D D+K+++++++EEA L E+Q +VE +MG TS + A
Sbjct: 20 EAQIEGEGAGQATDEDFSDLKRQVQQMQEEAEKLEEIQKEVEAQMG-------TSPSPAN 72
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDA 162
+ +D+RS+YVGNVDYA TP+E+Q HFQSCG +NR+TIL DKF G PKG+AY+EF E DA
Sbjct: 73 SQSIDARSVYVGNVDYAVTPQELQAHFQSCGPINRITILCDKFTGHPKGYAYIEFSEEDA 132
Query: 163 VQNALLLNETELHGRQLKVSAKRTNIP 189
V NA+LLN+T +HGRQ+KV+ KRTN+P
Sbjct: 133 VGNAVLLNDTVVHGRQIKVNPKRTNVP 159
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 115/175 (65%), Gaps = 21/175 (12%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV--QDSSSTSATQAEKEEVD 108
EDP D+E + R+KEIEEEA +R+MQ+ VEK+M ++S + A+ +K E D
Sbjct: 35 EDP-----DMEALTNRMKEIEEEAQLIRQMQSDVEKQMNMSTGSNTSQSVASIEDKIEAD 89
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
SRS+YVGNVDY T EE++ HF CG+VNRVTILTDKF G PKGFAY+EF + +AVQ AL
Sbjct: 90 SRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTAL 149
Query: 168 LLNETELHGRQLKVSAKRTNIPGMK------QFRGR-------RPNTFGFRGRRP 209
L+E+ GRQ+KV AKRTN PG+ + RGR + G+R RRP
Sbjct: 150 ALDESLFRGRQIKVCAKRTNRPGVSTTNRPPRARGRGGARVIVKYIYAGYRARRP 204
>gi|402085387|gb|EJT80285.1| polyadenylate-binding protein 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 200
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 114/175 (65%), Gaps = 24/175 (13%)
Query: 22 ADIDVDEH----EHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGAL 77
AD+ DEH E E D D+DH D ++E E + MKKR+ E+EEEA L
Sbjct: 2 ADVKKDEHDAADEREQD-DNDHGAGEDGNDEEE---------ISAMKKRVAEMEEEAAKL 51
Query: 78 REMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVN 137
REMQA ++ + + +S +++VDSRSI+VGNVDY+ +PEE+Q HFQSCG++N
Sbjct: 52 REMQANLDHQTQELSES---------RDDVDSRSIFVGNVDYSASPEEIQAHFQSCGSIN 102
Query: 138 RVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
RVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR +KV KRTN PGM
Sbjct: 103 RVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNYPGM 157
>gi|430811633|emb|CCJ30944.1| unnamed protein product [Pneumocystis jirovecii]
Length = 176
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 105/151 (69%), Gaps = 10/151 (6%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQ 101
E D + DP A ++L+ MK+R+ E+E EA LRE+QAK++KE + ++
Sbjct: 4 EWDGKQREDGDPEAEEQELQAMKQRVAEMEAEAEKLREIQAKLDKENAQLLEN------- 56
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
KE++DSRS+YVGNVDY TPEE+Q HFQ+CGT+NRVTIL D++ G PKGFAY+EF E
Sbjct: 57 --KEDIDSRSVYVGNVDYGATPEEIQAHFQTCGTINRVTILCDRYSGHPKGFAYIEFSEP 114
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
V AL+LNE+ GR LKV KRTN+PGM
Sbjct: 115 GLVPQALVLNESLFRGRLLKVVPKRTNLPGM 145
>gi|154310272|ref|XP_001554468.1| hypothetical protein BC1G_07056 [Botryotinia fuckeliana B05.10]
gi|347836575|emb|CCD51147.1| hypothetical protein [Botryotinia fuckeliana]
Length = 194
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/143 (53%), Positives = 106/143 (74%), Gaps = 10/143 (6%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSR 110
ED N + +++ MK+R+ E+EEEA LREMQA ++++ ++ + +KE++DSR
Sbjct: 16 EDDNNDEEEISAMKRRVAEMEEEAAKLREMQATLDQQ---------STDLREDKEDIDSR 66
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SI+VGNVDY+ +PE++Q HFQSCG++NRVTIL DKF G PKG+AYVEFVE V AL+L
Sbjct: 67 SIFVGNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQALVL 126
Query: 170 NETELHGRQLKVSAKRTNIPGMK 192
NE+ GR LKV KRTN+PGM+
Sbjct: 127 NESVFKGRNLKVVPKRTNVPGMQ 149
>gi|302912552|ref|XP_003050726.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
gi|256731664|gb|EEU45013.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
Length = 167
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 99/134 (73%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++ MK+R+ E+EEEA LREMQA +E++ + D +KE +D+RSI+VGNVD
Sbjct: 1 EITAMKRRVAEMEEEAKKLREMQATLEQQSADLAD---------DKESIDARSIFVGNVD 51
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR
Sbjct: 52 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 111
Query: 178 QLKVSAKRTNIPGM 191
+KV+ KRTNIPGM
Sbjct: 112 NIKVTPKRTNIPGM 125
>gi|346326841|gb|EGX96437.1| RNP domain-containing protein [Cordyceps militaris CM01]
Length = 201
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 110/166 (66%), Gaps = 21/166 (12%)
Query: 24 IDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAK 83
I ++HE HD D E A E EE + MK+R+ E+E+EA LREMQA
Sbjct: 11 IPAEQHEQHEQHDQDGEM---AGTEEEE--------ISAMKRRVAEMEQEAEKLREMQAS 59
Query: 84 VEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 143
+E++ ++ D +KE VDSRSI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL
Sbjct: 60 LEQQSASLAD---------DKESVDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILL 110
Query: 144 DKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNI 188
DKF GQPKG+AYVEF E V AL+LNE+ GR +KV++KRTN+
Sbjct: 111 DKFSGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKVTSKRTNV 156
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 122/195 (62%), Gaps = 21/195 (10%)
Query: 32 EHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV 91
E + HD +DAD + ++DP +LE +K R++E+EEEA L+++Q++V+K+M
Sbjct: 24 ETNGAHDESLLNDADMDVKDDP-----ELEAIKARVREMEEEAEKLKQLQSEVDKQMNLG 78
Query: 92 QDSSSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
TS EK EVD+RSIYVGNVDY T EE++QHF CG++NRVTIL ++F G
Sbjct: 79 SPPGITSPLNMSIEEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNRFDG 138
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM------------KQFR 195
PKGFAY+EF + D+VQ A+ ++E+ GRQ+KV KRTN PG+ FR
Sbjct: 139 HPKGFAYIEFGDRDSVQTAMAMDESLFRGRQIKVMPKRTNRPGISTTNRPPRGRGVSTFR 198
Query: 196 GRRPNTFGFRGRRPF 210
GR + GF G RP
Sbjct: 199 GRGASRGGFYGYRPM 213
>gi|255939756|ref|XP_002560647.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585270|emb|CAP92947.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 191
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 103/143 (72%), Gaps = 10/143 (6%)
Query: 50 EEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDS 109
+ED + +++E MK+R+ E+E EA LREMQA ++++ T + Q KE++D+
Sbjct: 20 QEDGVDDEEEIEAMKRRVAEMESEAAKLREMQADLDQQ---------TESLQENKEDIDA 70
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL 168
RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+
Sbjct: 71 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALV 130
Query: 169 LNETELHGRQLKVSAKRTNIPGM 191
LNE+ GR LKV KRTN+PGM
Sbjct: 131 LNESVFRGRNLKVVPKRTNLPGM 153
>gi|336260077|ref|XP_003344835.1| hypothetical protein SMAC_06118 [Sordaria macrospora k-hell]
gi|380089032|emb|CCC12976.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 213
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 105/142 (73%), Gaps = 10/142 (7%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSR 110
+D N + +++ MK+R+ E+EEEA LREMQA ++++ + ++ KE++DSR
Sbjct: 32 DDANDDEEEISAMKRRVAEMEEEAAKLREMQATLDQQHHELTEN---------KEDIDSR 82
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E + V AL+L
Sbjct: 83 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPNLVAQALVL 142
Query: 170 NETELHGRQLKVSAKRTNIPGM 191
NE+ GR +KV KRTNIPGM
Sbjct: 143 NESVFKGRNIKVVPKRTNIPGM 164
>gi|380491263|emb|CCF35443.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 203
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 111/164 (67%), Gaps = 13/164 (7%)
Query: 32 EHDHDHDHEHEHDADNENEE---DPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEM 88
E+ DH E + NEN + + +++ MK+R+ E+EEEA LREMQA ++++
Sbjct: 7 ENTTVEDHNPEQNDSNENNSVGEEDGHDEEEISAMKRRVAEMEEEAAKLREMQASLDQQS 66
Query: 89 GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
+ ++ KE++DSRSI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DKF G
Sbjct: 67 RELSEN---------KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTG 117
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
QPKG+AYVEF E V AL+LNE+ GR +KV KRTN+PGM
Sbjct: 118 QPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNVPGM 161
>gi|407928590|gb|EKG21444.1| hypothetical protein MPH_01242 [Macrophomina phaseolina MS6]
Length = 221
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 106/157 (67%), Gaps = 10/157 (6%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
D + E D E ++D N + +++ MKKR++E+E EA LREMQA ++ S
Sbjct: 26 DTEPTREEDPRPEIQDDDNNDEEEITAMKKRVQEMEAEAAKLREMQASLD---------S 76
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
T + KE++D+RS++VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AY
Sbjct: 77 QTETLRENKEDIDARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAY 136
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
VEF E V AL+LNE+ GR +KV KRTN+PGM
Sbjct: 137 VEFTEPSLVAQALVLNESVFRGRNIKVVPKRTNLPGM 173
>gi|331215415|ref|XP_003320388.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299378|gb|EFP75969.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 195
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 100/138 (72%), Gaps = 4/138 (2%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEM---GAVQDSSSTSATQAEKEEVDSRSIYV 114
++LE MK+R++E+E EA LREMQA+VEKEM G + + KE VDSRS+YV
Sbjct: 26 QELESMKQRVREMEFEAEKLREMQAQVEKEMNESGQGGHPAPVGGMEENKEVVDSRSVYV 85
Query: 115 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETE 173
GNVDY T EE+Q HF SCGT+NR+TIL DKF GQPKGFAY+EF + V A LLN++
Sbjct: 86 GNVDYGSTAEEIQAHFASCGTINRITILCDKFTGQPKGFAYIEFADPMLVPQACLLNDSL 145
Query: 174 LHGRQLKVSAKRTNIPGM 191
GRQ+KV+ KRTN+PG+
Sbjct: 146 FRGRQIKVTPKRTNVPGL 163
>gi|388852116|emb|CCF54292.1| related to poly(a) binding protein II [Ustilago hordei]
Length = 205
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 98/134 (73%), Gaps = 6/134 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++E MK+R+ E+E EA LRE+Q + + T+ E+EEVDSRSIYVGNVD
Sbjct: 50 EIEAMKQRVAEMEAEAAKLRELQ-----QAAGEAGGAGLHPTEEEREEVDSRSIYVGNVD 104
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y TPEE+QQHFQSCGT+NRVTIL DKF G PKG+AYVEF + V NA++LNE+ GR
Sbjct: 105 YGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANAMVLNESLFRGR 164
Query: 178 QLKVSAKRTNIPGM 191
+K++AKRTN+PGM
Sbjct: 165 LIKITAKRTNMPGM 178
>gi|425774334|gb|EKV12642.1| hypothetical protein PDIG_42430 [Penicillium digitatum PHI26]
gi|425777024|gb|EKV15220.1| hypothetical protein PDIP_41010 [Penicillium digitatum Pd1]
Length = 191
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/143 (53%), Positives = 105/143 (73%), Gaps = 10/143 (6%)
Query: 50 EEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDS 109
+ED + +++E MK+R+ E+E EA LREMQA ++++ ++Q++ KE++D+
Sbjct: 20 QEDGADDEEEIEAMKRRVAEMESEAAKLREMQADLDQQSESLQEN---------KEDIDA 70
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL 168
RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+
Sbjct: 71 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALV 130
Query: 169 LNETELHGRQLKVSAKRTNIPGM 191
LNE+ GR LKV KRTN+PGM
Sbjct: 131 LNESVFRGRNLKVVPKRTNLPGM 153
>gi|296425243|ref|XP_002842152.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638411|emb|CAZ86343.1| unnamed protein product [Tuber melanosporum]
Length = 190
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 109/163 (66%), Gaps = 19/163 (11%)
Query: 30 EHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMG 89
+++ + +H HE AD+E E + MK+R+ E+E EA LREMQA ++KE
Sbjct: 3 DNQKEAEHIDVHEEGADDEEE---------ISAMKRRVAEMEAEAAKLREMQATLDKE-- 51
Query: 90 AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQ 148
T+ + +KE++D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G
Sbjct: 52 -------TNELREDKEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGH 104
Query: 149 PKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
PKG+AYVEF E V AL+LNE+ GR LKV KRTN+PGM
Sbjct: 105 PKGYAYVEFTEPSLVAQALVLNESVFRGRSLKVVPKRTNLPGM 147
>gi|367041013|ref|XP_003650887.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
gi|346998148|gb|AEO64551.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
Length = 193
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 110/160 (68%), Gaps = 19/160 (11%)
Query: 34 DHDHDHEHEH-DADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ 92
D HD +H DADNE EE + MK+R+ E+E EA LREMQA +++ + Q
Sbjct: 8 DKPHDETRDHVDADNEEEE--------ISAMKRRVAEMEAEAAKLREMQASLDQ---SRQ 56
Query: 93 DSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKG 151
D S +KE+VD+RSI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DKF G PKG
Sbjct: 57 DLSE------DKEDVDNRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGHPKG 110
Query: 152 FAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+AYVEF E + V AL+LN++ GR +KV KRTNIPGM
Sbjct: 111 YAYVEFSEPNLVAQALVLNDSVFKGRNIKVEPKRTNIPGM 150
>gi|452984683|gb|EME84440.1| hypothetical protein MYCFIDRAFT_122613, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 185
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 112/158 (70%), Gaps = 11/158 (6%)
Query: 36 DHDHEHEHDA-DNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDS 94
+ DH+ E DA D + E++ + +++ MKKR++E+E EA LREMQA V+ + +++S
Sbjct: 3 NEDHKREDDALDRQGEDEDLGDEEEIAAMKKRVEEMEAEAAKLREMQASVDAQTDNLRES 62
Query: 95 SSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFA 153
KE++DSRSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+A
Sbjct: 63 ---------KEDIDSRSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYA 113
Query: 154 YVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
YVEF E + V AL+LNE+ GR +KV KRTN+PGM
Sbjct: 114 YVEFSEPNLVTQALVLNESVFRGRNIKVVPKRTNLPGM 151
>gi|11359595|pir||T49743 probable rrm-type rna binding protein [imported] - Neurospora
crassa
gi|40882336|emb|CAF06158.1| probable RRM-type RNA binding protein [Neurospora crassa]
Length = 215
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 104/142 (73%), Gaps = 10/142 (7%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSR 110
+D N + +++ MK+R+ E+EEEA LREMQA ++++ + ++ KE++DSR
Sbjct: 36 DDVNDDEEEISAMKRRVAEMEEEAAKLREMQASLDQQHHELTEN---------KEDIDSR 86
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+L
Sbjct: 87 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVL 146
Query: 170 NETELHGRQLKVSAKRTNIPGM 191
NE+ GR +KV KRTNIPGM
Sbjct: 147 NESVFKGRNIKVVPKRTNIPGM 168
>gi|350286752|gb|EGZ67999.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 215
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 104/142 (73%), Gaps = 10/142 (7%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSR 110
+D N + +++ MK+R+ E+EEEA LREMQA ++++ + ++ KE++DSR
Sbjct: 36 DDVNDDEEEISAMKRRVAEMEEEAAKLREMQASLDQQHHELTEN---------KEDIDSR 86
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+L
Sbjct: 87 SIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVL 146
Query: 170 NETELHGRQLKVSAKRTNIPGM 191
NE+ GR +KV KRTNIPGM
Sbjct: 147 NESVFKGRNIKVVPKRTNIPGM 168
>gi|348679138|gb|EGZ18955.1| hypothetical protein PHYSODRAFT_409429 [Phytophthora sojae]
Length = 167
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 108/149 (72%), Gaps = 11/149 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSST--------SATQAEKEEVDSR 110
++EDMK+R+KE+EEEA L EMQ++VE +MG ++++ST +A A+ ++D
Sbjct: 21 EIEDMKRRVKEMEEEAAKLSEMQSEVESQMG--KNTASTLNEMGAAGAAASAQPVQMDDT 78
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SIY+G VDY TPEE+Q FQSCGT+NRVTIL DKF GQPKG+AY+EF DAV++ALLL
Sbjct: 79 SIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASRDAVESALLL 138
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFRGRR 198
N+T GRQLKV+ KR N+ G RG R
Sbjct: 139 NDTMFRGRQLKVTPKRQNVRGFNMTRGGR 167
>gi|350629412|gb|EHA17785.1| hypothetical protein ASPNIDRAFT_55885 [Aspergillus niger ATCC 1015]
Length = 192
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 110/161 (68%), Gaps = 13/161 (8%)
Query: 32 EHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV 91
E + D +H + ++E PN +++ MKKR+ E+E EA LREMQA ++++ +
Sbjct: 4 EENEIKDERLQHQEEAGDDEVPN---EEIAAMKKRVAEMESEAAKLREMQATLDQQSENL 60
Query: 92 QDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPK 150
++ +KEE+D+RS++VGNVDY +PEE+Q HFQSCG++NRVTIL DKF GQPK
Sbjct: 61 RE---------DKEEIDARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPK 111
Query: 151 GFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
G+AYVEF E V AL+LNE+ GR LKV KRTN+PGM
Sbjct: 112 GYAYVEFAEPSLVAQALVLNESVFRGRNLKVVPKRTNLPGM 152
>gi|302421908|ref|XP_003008784.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261351930|gb|EEY14358.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 205
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 114/174 (65%), Gaps = 23/174 (13%)
Query: 17 PDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGA 76
P+E+ D++ + D D++ + D +EE+ +A MK+R+ E+EEEA
Sbjct: 10 PEELPVDVE------QQDTPADNQQAAEDDGHDEEEISA-------MKRRVAEMEEEAAK 56
Query: 77 LREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 136
LREMQA ++ + V D+ KE++DSRSI+VGNVDY+ +PEE+Q HFQSCG++
Sbjct: 57 LREMQATLDTQTQDVSDN---------KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSI 107
Query: 137 NRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR +KV KRTNIP
Sbjct: 108 NRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNIP 161
>gi|346969940|gb|EGY13392.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 205
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 114/174 (65%), Gaps = 23/174 (13%)
Query: 17 PDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGA 76
P+E+ D++ + D D++ + D +EE+ +A MK+R+ E+EEEA
Sbjct: 10 PEELPVDVE------QQDTPADNQQAAEDDGHDEEEISA-------MKRRVAEMEEEAAK 56
Query: 77 LREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 136
LREMQA ++ + + D+ KE++DSRSI+VGNVDY+ +PEE+Q HFQSCG++
Sbjct: 57 LREMQATLDTQTQDISDN---------KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSI 107
Query: 137 NRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR +KV KRTNIP
Sbjct: 108 NRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNIP 161
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 123/205 (60%), Gaps = 31/205 (15%)
Query: 2 EQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLE 61
+++ + +HD GGE+ DE D EH D DP +LE
Sbjct: 40 QENGDPQHDSTGGELLDESLGD------------------EHSID-----DP-----ELE 71
Query: 62 DMKKRLKEIEEEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDSRSIYVGNVDYA 120
+K R++E+EEEA L++MQ++VEK+M + S T EK EVD+RSIYVGNVDY
Sbjct: 72 AIKARVREMEEEAEKLKQMQSEVEKQMSISPAGGGSLGLTLEEKIEVDARSIYVGNVDYG 131
Query: 121 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQL 179
T EE++QHF CG++NRVTIL DKF G PKGFAY+EF + D++Q A+ L+E+ GRQ+
Sbjct: 132 ATAEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIEFTDKDSIQTAMALDESLFRGRQI 191
Query: 180 KVSAKRTNIPGMKQFRGRRPNTFGF 204
KV KRTN PG+ R P GF
Sbjct: 192 KVMTKRTNRPGIST-TNRPPXPKGF 215
>gi|226291492|gb|EEH46920.1| hypothetical protein PADG_03018 [Paracoccidioides brasiliensis
Pb18]
Length = 264
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 102/145 (70%), Gaps = 10/145 (6%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
E E P +++ MKKR+ E+E EA LREMQA ++++ ++++ +KE++
Sbjct: 89 ETHEKPGDEEEEIAAMKKRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDI 139
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V A
Sbjct: 140 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 199
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L+LNE+ GR LKV KRTN+PGM
Sbjct: 200 LVLNESVFRGRNLKVVPKRTNLPGM 224
>gi|121702091|ref|XP_001269310.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119397453|gb|EAW07884.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 188
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MKKR+ E+E EA LREMQA ++++ ++++ +KEE+D+RSI+VGNVDY +
Sbjct: 29 MKKRVAEMESEAAKLREMQATLDQQSESLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 123 PEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 182 SAKRTNIPGM 191
KRTN+PGM
Sbjct: 140 VPKRTNLPGM 149
>gi|406860694|gb|EKD13751.1| polyadenylate-binding protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 194
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 98/134 (73%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++ MKKR+ E+EEEA LREMQA ++ + + D +KE++DSRSI+VGNVD
Sbjct: 23 EISQMKKRVAEMEEEAAKLREMQASLDVQSHDLSD---------DKEDIDSRSIFVGNVD 73
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y+ TPE++Q HF+SCG++NRVTIL DKF G PKG+AYVEF E V AL+LN++ HGR
Sbjct: 74 YSATPEDIQAHFESCGSINRVTILLDKFTGHPKGYAYVEFTEPTLVAQALVLNDSMFHGR 133
Query: 178 QLKVSAKRTNIPGM 191
LKV KRTN+PGM
Sbjct: 134 NLKVVPKRTNLPGM 147
>gi|358370907|dbj|GAA87517.1| RNP domain protein [Aspergillus kawachii IFO 4308]
Length = 190
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 107/157 (68%), Gaps = 18/157 (11%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
D +H+ +A ++ EE + MKKR+ E+E EA LREMQA ++++ +++
Sbjct: 10 DERLQHQEEAGDDEEE--------IAAMKKRVAEMESEAAKLREMQATLDQQSENLRE-- 59
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
+KEE+D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AY
Sbjct: 60 -------DKEEIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAY 112
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
VEF E V AL+LNE+ GR LKV KRTN+PGM
Sbjct: 113 VEFAEPSLVAQALVLNESVFRGRNLKVVPKRTNLPGM 149
>gi|70995100|ref|XP_752316.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66849951|gb|EAL90278.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|159131072|gb|EDP56185.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 215
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 99/134 (73%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++ MK+R+ E+E EA LREMQA ++++ ++++ +KEE+D+RSI+VGNVD
Sbjct: 50 EIAAMKRRVAEMESEAAKLREMQATLDQQSESLRE---------DKEEIDARSIFVGNVD 100
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR
Sbjct: 101 YGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGR 160
Query: 178 QLKVSAKRTNIPGM 191
LKV KRTN+PGM
Sbjct: 161 NLKVVPKRTNLPGM 174
>gi|145348085|ref|XP_001418487.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578716|gb|ABO96780.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 144
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/143 (55%), Positives = 103/143 (72%), Gaps = 5/143 (3%)
Query: 50 EEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDS 109
+EDP ++ M++RLKE+E+EA L+ KV+ M A + + A+K+E D+
Sbjct: 7 DEDP-----EIAAMQRRLKEMEDEAEKLKGEHEKVDDAMAAEEAGKNPEEEAAKKQEADA 61
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 169
RS+YVG VDYA TPE++ F S GTVNRVTIL DKF PKGFAYVEF+E DAV NA+LL
Sbjct: 62 RSVYVGQVDYASTPEDLANAFASAGTVNRVTILHDKFDNPKGFAYVEFLEPDAVHNAILL 121
Query: 170 NETELHGRQLKVSAKRTNIPGMK 192
+ TE+ GR++KVSAKRTN+PGMK
Sbjct: 122 DGTEIRGRKIKVSAKRTNVPGMK 144
>gi|320586503|gb|EFW99173.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 194
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 105/167 (62%), Gaps = 18/167 (10%)
Query: 26 VDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVE 85
+ E + E E D N+ EE + MK+R+ E+EEEA LREMQ E
Sbjct: 1 MSETKPEESATESLEKSFDVGNDEEE--------ISAMKRRVAEMEEEAARLREMQKDTE 52
Query: 86 KEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 145
+ + D+ KE+VDSRSI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DK
Sbjct: 53 HQSQELADN---------KEDVDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDK 103
Query: 146 F-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
F GQPKG+AYVEF E V AL+LNE+ GR +KV KRTNIPGM
Sbjct: 104 FTGQPKGYAYVEFSEPSLVAQALVLNESVFKGRNIKVVPKRTNIPGM 150
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 121/194 (62%), Gaps = 7/194 (3%)
Query: 32 EHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV 91
E+ D D + D + N + +LE +K R++E+EEEA L+++Q++V+K+M
Sbjct: 19 ENGQDGDAIMQCDGVKRELNEANIDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMG 78
Query: 92 QDSSSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
TS +K EVD+RSIYVGNVDY T EE++QHF CG+VNRVTIL +KF G
Sbjct: 79 SPPGITSPLNMSLEDKREVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDG 138
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK-QFRGRRPNTFGFRG 206
PKGFAY+EF E D+VQ A+ ++E+ GRQ+KV KRTN PG+ RG R T G+RG
Sbjct: 139 HPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPR-GTRGYRG 197
Query: 207 -RRPFIPGVPFVPY 219
R I G + Y
Sbjct: 198 VARGIIRGSAYFGY 211
>gi|310800127|gb|EFQ35020.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 203
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 98/133 (73%), Gaps = 10/133 (7%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDY 119
+ MK+R+ E+EEEA LREMQA ++++ + ++ KE++DSRSI+VGNVDY
Sbjct: 38 ISAMKRRVAEMEEEAAKLREMQASLDQQSRELSEN---------KEDIDSRSIFVGNVDY 88
Query: 120 ACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR
Sbjct: 89 SASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRN 148
Query: 179 LKVSAKRTNIPGM 191
+KV KRTN+PGM
Sbjct: 149 IKVVPKRTNVPGM 161
>gi|116201543|ref|XP_001226583.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
gi|88177174|gb|EAQ84642.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 114/166 (68%), Gaps = 13/166 (7%)
Query: 27 DEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEK 86
DEH+ D + H+ D+ N ++ + +++ MK R+ E+E EA LREMQA +++
Sbjct: 56 DEHKMSSPRDEEKPHDETRDHANGDN---DEEEISAMKLRVAEMEAEAAKLREMQASLDQ 112
Query: 87 EMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF 146
A QD S +KE++D+RSI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DKF
Sbjct: 113 ---ARQDLSE------DKEDIDNRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKF 163
Query: 147 -GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
GQPKG+AYVEF E + V AL+LN++ GR +KV KRTNIPGM
Sbjct: 164 TGQPKGYAYVEFSEPNLVAQALVLNDSVFKGRNIKVEPKRTNIPGM 209
>gi|242767348|ref|XP_002341352.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218724548|gb|EED23965.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 188
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 104/149 (69%), Gaps = 16/149 (10%)
Query: 50 EEDPNANSKDLED------MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE 103
EE NA ++ +ED MKKR+ E+E EA LREMQ ++ E ++++ +
Sbjct: 10 EEQLNAQTQGVEDEEDIAAMKKRVAEMESEAAKLREMQQTLDAESESLRE---------D 60
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDA 162
KE++D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E
Sbjct: 61 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSL 120
Query: 163 VQNALLLNETELHGRQLKVSAKRTNIPGM 191
V AL+LNE+ GR LKV+ KRTN+PGM
Sbjct: 121 VAQALVLNESVFRGRNLKVTPKRTNVPGM 149
>gi|340372421|ref|XP_003384742.1| PREDICTED: polyadenylate-binding protein 2-like [Amphimedon
queenslandica]
Length = 273
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 105/143 (73%), Gaps = 7/143 (4%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKE-MGAVQDSSSTSATQAEKEEVDS 109
EDP ++E +K R+KE+EEEA L+EMQ +VEKE MG+ ++ T EK E DS
Sbjct: 82 EDP-----EIEAIKARVKEMEEEAEKLKEMQGEVEKELMGSKPAQTNNFPTMEEKLESDS 136
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL 168
RS+YVGNVDY T EE+ QHF CG++NRVTIL DK+ G PKGFAYVEF+E D+V+ AL
Sbjct: 137 RSVYVGNVDYQATAEELGQHFNGCGSINRVTILCDKYSGHPKGFAYVEFIESDSVKMALD 196
Query: 169 LNETELHGRQLKVSAKRTNIPGM 191
L+E+ GRQ+KV+AKRTN PG+
Sbjct: 197 LDESLFRGRQIKVTAKRTNRPGL 219
>gi|119496085|ref|XP_001264816.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119412978|gb|EAW22919.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 190
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MK+R+ E+E EA LREMQA ++++ ++++ +KEE+D+RSI+VGNVDY +
Sbjct: 29 MKRRVAEMESEAAKLREMQATLDQQSESLRE---------DKEEIDARSIFVGNVDYGAS 79
Query: 123 PEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR LKV
Sbjct: 80 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 139
Query: 182 SAKRTNIPGM 191
KRTN+PGM
Sbjct: 140 VPKRTNLPGM 149
>gi|336466383|gb|EGO54548.1| hypothetical protein NEUTE1DRAFT_69316 [Neurospora tetrasperma FGSC
2508]
Length = 229
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 99/134 (73%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++ MK+R+ E+EEEA LREMQA ++++ + ++ KE++DSRSI+VGNVD
Sbjct: 58 EISAMKRRVAEMEEEAAKLREMQASLDQQHHELTEN---------KEDIDSRSIFVGNVD 108
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR
Sbjct: 109 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 168
Query: 178 QLKVSAKRTNIPGM 191
+KV KRTNIPGM
Sbjct: 169 NIKVVPKRTNIPGM 182
>gi|164426633|ref|XP_957585.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
gi|157071415|gb|EAA28349.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
Length = 229
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 99/134 (73%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++ MK+R+ E+EEEA LREMQA ++++ + ++ KE++DSRSI+VGNVD
Sbjct: 58 EISAMKRRVAEMEEEAAKLREMQASLDQQHHELTEN---------KEDIDSRSIFVGNVD 108
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR
Sbjct: 109 YSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGR 168
Query: 178 QLKVSAKRTNIPGM 191
+KV KRTNIPGM
Sbjct: 169 NIKVVPKRTNIPGM 182
>gi|295668084|ref|XP_002794591.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225679740|gb|EEH18024.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226286007|gb|EEH41573.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 188
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 101/145 (69%), Gaps = 10/145 (6%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
E E P +++ MKKR+ E+E EA LREMQA ++++ + + + +KE++
Sbjct: 13 ETHEKPGDEEEEIAAMKKRVAEMESEAAKLREMQASLDQQ---------SESLREDKEDI 63
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 123
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L+LNE+ GR LKV KRTN+PGM
Sbjct: 124 LVLNESVFRGRNLKVVPKRTNLPGM 148
>gi|145239151|ref|XP_001392222.1| polyadenylate-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134076726|emb|CAK39785.1| unnamed protein product [Aspergillus niger]
Length = 189
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 107/157 (68%), Gaps = 18/157 (11%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
D +H+ +A ++ EE + MKKR+ E+E EA LREMQA ++++ +++
Sbjct: 10 DERLQHQEEAGDDEEE--------IAAMKKRVAEMESEAAKLREMQATLDQQSENLRE-- 59
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
+KEE+D+RS++VGNVDY +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AY
Sbjct: 60 -------DKEEIDARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAY 112
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
VEF E V AL+LNE+ GR LKV KRTN+PGM
Sbjct: 113 VEFAEPSLVAQALVLNESVFRGRNLKVVPKRTNLPGM 149
>gi|258568696|ref|XP_002585092.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
gi|237906538|gb|EEP80939.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
Length = 194
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 106/155 (68%), Gaps = 17/155 (10%)
Query: 38 DHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSST 97
+H + HD ++EE+ +E MK+R+ E+E EA LREMQA ++K+ +
Sbjct: 10 EHMNTHDKHGDDEEE-------IEAMKRRVAEMESEAAKLREMQASLDKQ---------S 53
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVE 156
+ +KE++D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVE
Sbjct: 54 ENLREDKEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVE 113
Query: 157 FVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
F E V AL+LNE+ GR LKV KRTN+PGM
Sbjct: 114 FSEPSLVAQALVLNESVFRGRNLKVVPKRTNLPGM 148
>gi|392568671|gb|EIW61845.1| polyadenylate-binding protein 2 [Trametes versicolor FP-101664 SS1]
Length = 192
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 101/147 (68%), Gaps = 6/147 (4%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKE 105
DN E+DP ++ MK+R++E+E EA LRE+QA EK + T+ EK
Sbjct: 18 DNAEEDDP-----EILLMKQRVEEMEREATKLRELQAAAEKAERSTPTGDQPMETEEEKA 72
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQ 164
DSRSIYVGNVDY+ TPEE+QQHFQ+CGT+NRVTIL DKF G PKG+AYVEF E + V
Sbjct: 73 ATDSRSIYVGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFSETEHVD 132
Query: 165 NALLLNETELHGRQLKVSAKRTNIPGM 191
AL ++ + GR +KV+AKRTNIPG
Sbjct: 133 AALSMDNSLFRGRLIKVTAKRTNIPGF 159
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 121/194 (62%), Gaps = 7/194 (3%)
Query: 32 EHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV 91
E+ D D + D + N + +LE +K R++E+EEEA L+++Q++V+K+M
Sbjct: 19 ENGQDGDAIMQCDGVKRELNEANIDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMG 78
Query: 92 QDSSSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
TS +K EVD+RSIYVGNVDY T EE++QHF CG+VNRVTIL +KF G
Sbjct: 79 SPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDG 138
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK-QFRGRRPNTFGFRG 206
PKGFAY+EF E D+VQ A+ ++E+ GRQ+KV KRTN PG+ RG R T G+RG
Sbjct: 139 HPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPR-GTRGYRG 197
Query: 207 -RRPFIPGVPFVPY 219
R I G + Y
Sbjct: 198 IARGIIRGSAYFGY 211
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 121/194 (62%), Gaps = 7/194 (3%)
Query: 32 EHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV 91
E+ D D + D + N + +LE +K R++E+EEEA L+++Q++V+K+M
Sbjct: 19 ENGQDGDAIMQCDGVKRELNEANIDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMG 78
Query: 92 QDSSSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
TS +K EVD+RSIYVGNVDY T EE++QHF CG+VNRVTIL +KF G
Sbjct: 79 SPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDG 138
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK-QFRGRRPNTFGFRG 206
PKGFAY+EF E D+VQ A+ ++E+ GRQ+KV KRTN PG+ RG R T G+RG
Sbjct: 139 HPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPR-GTRGYRG 197
Query: 207 -RRPFIPGVPFVPY 219
R I G + Y
Sbjct: 198 IARGIIRGSAYFGY 211
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 119/192 (61%), Gaps = 30/192 (15%)
Query: 2 EQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLE 61
+++ + +HD GGE+ DE D EH D DP +LE
Sbjct: 40 QENGDPQHDSTGGELLDESLGD------------------EHSID-----DP-----ELE 71
Query: 62 DMKKRLKEIEEEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDSRSIYVGNVDYA 120
+K R++E+EEEA L++MQ++VEK+M + S T EK EVD+RSIYVGNVDY
Sbjct: 72 AIKARVREMEEEAEKLKQMQSEVEKQMSISPAGGGSLGLTLEEKIEVDARSIYVGNVDYG 131
Query: 121 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQL 179
T EE++QHF CG++NRVTIL DKF G PKGFAY+EF + D++Q A+ L+E+ GRQ+
Sbjct: 132 ATAEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIEFTDKDSIQTAMALDESLFRGRQI 191
Query: 180 KVSAKRTNIPGM 191
KV KRTN PG+
Sbjct: 192 KVMTKRTNRPGI 203
>gi|240281788|gb|EER45291.1| RNP domain-containing protein [Ajellomyces capsulatus H143]
Length = 188
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 102/145 (70%), Gaps = 10/145 (6%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
E E P +++ MK+R+ E+E EA LREMQA ++++ ++++ +KE++
Sbjct: 13 ETHEKPGYEEEEIAAMKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDI 63
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 123
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L+LNE+ GR LKV KRTN+PGM
Sbjct: 124 LVLNESVFRGRNLKVVPKRTNLPGM 148
>gi|303320527|ref|XP_003070263.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109949|gb|EER28118.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320041356|gb|EFW23289.1| hypothetical protein CPSG_01188 [Coccidioides posadasii str.
Silveira]
Length = 196
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 103/144 (71%), Gaps = 10/144 (6%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVD 108
++ P + +++E MK+R+ E+E EA LREMQA ++K+ +++ +KE++D
Sbjct: 14 TQDKPGDDEEEIEAMKRRVAEMESEAAKLREMQASLDKQSENLRE---------DKEDID 64
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V AL
Sbjct: 65 ARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQAL 124
Query: 168 LLNETELHGRQLKVSAKRTNIPGM 191
+LNE+ GR LKV KRTN+PGM
Sbjct: 125 VLNESLFRGRNLKVVPKRTNLPGM 148
>gi|261205936|ref|XP_002627705.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239592764|gb|EEQ75345.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239611077|gb|EEQ88064.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350679|gb|EGE79536.1| RNP domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 189
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 102/145 (70%), Gaps = 10/145 (6%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
E E P +++ MK+R+ E+E EA LREMQA ++++ ++++ +KE++
Sbjct: 13 ETHEKPGDEEEEIAAMKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDI 63
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 123
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L+LNE+ GR LKV KRTN+PGM
Sbjct: 124 LVLNESVFRGRNLKVVPKRTNLPGM 148
>gi|289741433|gb|ADD19464.1| splicing factor RNPS1 [Glossina morsitans morsitans]
Length = 223
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 131/209 (62%), Gaps = 19/209 (9%)
Query: 21 DADIDVDEHEHEHDHDH-DHEHEHDADNENEEDPNAN-SKDLEDMKKRLKEIEEEAGALR 78
D D+ ++E + + D + E+E + NENE++ N +LE +K R+KE+EEEA ++
Sbjct: 3 DEDLSLNEDQLLENLDEANGENEAELMNENEDETNMQIDPELEAIKARVKEMEEEAEKIK 62
Query: 79 EMQAKVEKEM-GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVN 137
+MQ++V+K+M G+ ++ + EK+E+D+RS+YVGNVDY + EE++ HF CGT+N
Sbjct: 63 QMQSEVDKQMAGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTIN 122
Query: 138 RVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK---- 192
RVTIL +K G PKGFAY+EF + V+ AL +NET GRQ+KV +KRTN PG+
Sbjct: 123 RVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNR 182
Query: 193 ----QFRGRRPNT------FGFRG-RRPF 210
FRGR FRG RRP
Sbjct: 183 FPRGTFRGRGARISRACCHTSFRGTRRPI 211
>gi|19112586|ref|NP_595794.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe 972h-]
gi|74675955|sp|O14327.1|PAB2_SCHPO RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|2467274|emb|CAB16904.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe]
Length = 166
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 98/135 (72%), Gaps = 10/135 (7%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
K+L +MK+R+ E+E EA LR MQ +++ E T A + +KE +D++S+YVGNV
Sbjct: 12 KELLEMKERVAEMEAEAAKLRAMQEQLDNE---------TEALRNDKESIDAQSVYVGNV 62
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY+ TPEE+Q HF SCG+VNRVTIL DKF G PKGFAY+EF E V NALLLN + LH
Sbjct: 63 DYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHE 122
Query: 177 RQLKVSAKRTNIPGM 191
R LKV+ KRTN+PGM
Sbjct: 123 RPLKVTPKRTNVPGM 137
>gi|119184697|ref|XP_001243223.1| hypothetical protein CIMG_07119 [Coccidioides immitis RS]
gi|392866108|gb|EAS28718.2| polyadenylate-binding protein 2 [Coccidioides immitis RS]
Length = 196
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 102/144 (70%), Gaps = 10/144 (6%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVD 108
++ P + +++E MK+R+ E+E EA LREMQA ++K+ + + +KE++D
Sbjct: 14 TQDKPGDDEEEIEAMKQRVAEMESEAAKLREMQASLDKQ---------SENLREDKEDID 64
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V AL
Sbjct: 65 ARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQAL 124
Query: 168 LLNETELHGRQLKVSAKRTNIPGM 191
+LNE+ GR LKV KRTN+PGM
Sbjct: 125 VLNESLFRGRNLKVVPKRTNLPGM 148
>gi|169763928|ref|XP_001727864.1| polyadenylate-binding protein 2 [Aspergillus oryzae RIB40]
gi|83770892|dbj|BAE61025.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871171|gb|EIT80336.1| splicing factor RNPS1, SR protein superfamily [Aspergillus oryzae
3.042]
Length = 187
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 97/134 (72%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++ MK+R+ E+E EA LREMQA ++++ + + +KEE+D+RSI+VGNVD
Sbjct: 25 EIAAMKRRVAEMESEAAKLREMQATLDQQ---------SENLREDKEEIDARSIFVGNVD 75
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR
Sbjct: 76 YGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALVLNESVFRGR 135
Query: 178 QLKVSAKRTNIPGM 191
LKV KRTN+PGM
Sbjct: 136 NLKVVPKRTNLPGM 149
>gi|170592979|ref|XP_001901242.1| pabpn1-prov protein [Brugia malayi]
gi|158591309|gb|EDP29922.1| pabpn1-prov protein, putative [Brugia malayi]
Length = 219
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 114/179 (63%), Gaps = 17/179 (9%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV--QDSSSTSATQAEKEEVD 108
EDP D+E + R+KEIEEEA +R+MQ+ VEK+M ++S + A+ +K E D
Sbjct: 35 EDP-----DMEALTNRMKEIEEEAQLIRQMQSDVEKQMNMSTGSNTSQSVASIEDKIEAD 89
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
SRS+YVGNVDY T EE++ HF CG+VNRVTILTDKF G PKGFAY+EF + +AVQ AL
Sbjct: 90 SRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTAL 149
Query: 168 LLNETELHGRQLK-----VSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGY 221
L+E+ GRQ+K V AKRTN PG+ R P G G R V ++ GY
Sbjct: 150 ALDESLFRGRQIKASFCSVCAKRTNRPGVST-TNRPPRARGRGGARVI---VKYIYAGY 204
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 128/218 (58%), Gaps = 15/218 (6%)
Query: 8 EHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRL 67
E D+ G+ D +D E+ D D + D + + N + +LE +K R+
Sbjct: 3 ESDLLAGDHIDGLDG--------LENGQDGDTIMQCDGVKRDLGEANVDDPELEAIKARV 54
Query: 68 KEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA---EKEEVDSRSIYVGNVDYACTPE 124
+E+EEEA L+++Q++V+K+M TS +K EVD+RSIYVGNVDY T E
Sbjct: 55 REMEEEAEKLKQLQSEVDKQMNMGSPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAE 114
Query: 125 EVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
E++QHF CG+VNRVTIL +KF G PKGFAY+EF E D+VQ A+ ++E+ GRQ+KV
Sbjct: 115 ELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMP 174
Query: 184 KRTNIPGMKQF-RGRRPNTFGFRGR-RPFIPGVPFVPY 219
KRTN PG RG R G+RG R I G + Y
Sbjct: 175 KRTNKPGFSMTNRGPR-GARGYRGMARGIIRGSAYFGY 211
>gi|400601143|gb|EJP68786.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 194
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 106/154 (68%), Gaps = 18/154 (11%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
DH HE E + EE+ +A MK+R+ E+EEEA LREMQA +E++ ++ D
Sbjct: 14 DH-HEQEGEMAGTEEEEISA-------MKRRVAEMEEEAKKLREMQASLEQQSASLAD-- 63
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
+KE VD+RSI+VGNVDY+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AY
Sbjct: 64 -------DKESVDARSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAY 116
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNI 188
VEF E V AL+LNE+ GR +KV+ KRTN+
Sbjct: 117 VEFTEPSLVAQALVLNESVFKGRNIKVTPKRTNV 150
>gi|67521766|ref|XP_658944.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|40746367|gb|EAA65523.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|259488327|tpe|CBF87685.1| TPA: RNP domain protein (AFU_orthologue; AFUA_1G09490) [Aspergillus
nidulans FGSC A4]
Length = 187
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MK+R+ E+E EA LREMQA ++++ ++++ +KE++D+RSI+VGNVDY +
Sbjct: 30 MKRRVAEMESEAAKLREMQATLDQQSESLKE---------DKEDIDARSIFVGNVDYGAS 80
Query: 123 PEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LNE+ GR LKV
Sbjct: 81 PEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALVLNESVFRGRNLKV 140
Query: 182 SAKRTNIPGM 191
KRTN+PGM
Sbjct: 141 VPKRTNLPGM 150
>gi|212528088|ref|XP_002144201.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210073599|gb|EEA27686.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 190
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 97/134 (72%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
D+ MKKR+ E+E EA LREMQ ++ E ++++ +KE++D+RSI+VGNVD
Sbjct: 25 DIAAMKKRVAEMESEAAKLREMQQTLDAESESLRE---------DKEDIDARSIFVGNVD 75
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V AL+LNE+ GR
Sbjct: 76 YGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQALVLNESVFRGR 135
Query: 178 QLKVSAKRTNIPGM 191
LKV+ KRTN+PGM
Sbjct: 136 NLKVTPKRTNVPGM 149
>gi|328860711|gb|EGG09816.1| hypothetical protein MELLADRAFT_29239 [Melampsora larici-populina
98AG31]
Length = 150
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 102/137 (74%), Gaps = 6/137 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEM---GAVQDSSSTSATQAEKEEVDSRSIYVG 115
+LE MK+R++E+E EA LREMQA+VEKEM G Q+ ++ T+ ++E VDSRS+YVG
Sbjct: 1 ELESMKQRVREMEMEAEKLREMQAQVEKEMNEQGGGQEGNN--PTEEDREAVDSRSVYVG 58
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE+Q HF SCGT+NR+TIL DKF GQPKG+AY+EF + V A LN++
Sbjct: 59 NVDYGSTAEEIQAHFSSCGTINRITILCDKFTGQPKGYAYIEFSDPMLVHQACQLNDSLF 118
Query: 175 HGRQLKVSAKRTNIPGM 191
GRQ+KV+ KRTN+PG
Sbjct: 119 RGRQIKVTPKRTNLPGF 135
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 110/161 (68%), Gaps = 8/161 (4%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA-- 99
E DN+ E DP ++E +++RLKE+E EA +R + ++VEK+M V + SS++
Sbjct: 22 EVLLDNQAELDP-----EIEQIRERLKEMEREAQLIRNLHSEVEKQMTTVLNESSSTIPL 76
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
T EK EVDSRS++VGNVDY T E+++ HF CG +NRVTIL D++ G+PKGFAYVEF
Sbjct: 77 TTEEKIEVDSRSVFVGNVDYGATAEQLEAHFHGCGAINRVTILCDRYSGRPKGFAYVEFA 136
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRP 199
+ ++ Q +L + +T GRQ+KV KRTN PGM R RRP
Sbjct: 137 DKESAQASLAMTDTLFRGRQIKVLEKRTNRPGMGNTRARRP 177
>gi|403416120|emb|CCM02820.1| predicted protein [Fibroporia radiculosa]
Length = 255
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 107/149 (71%), Gaps = 7/149 (4%)
Query: 47 NENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEK-EMGAVQDSSSTSATQAE-- 103
++ EED ++K++ MK+R++E+E+EA LREMQA+ EK E G+ D ++ + E
Sbjct: 19 DDGEED---DTKEILAMKQRVEEMEKEANKLREMQAEAEKAENGSATDGDTSVPMETEDD 75
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDA 162
K DSRSI+VGNVDYA TPEE+Q HFQ+CG +NRVTIL DKF G PKGFAYVEF E +
Sbjct: 76 KAAADSRSIFVGNVDYAATPEEIQMHFQACGVINRVTILCDKFTGHPKGFAYVEFGEAEH 135
Query: 163 VQNALLLNETELHGRQLKVSAKRTNIPGM 191
V AL ++ + GR +KV+AKRTNIPG
Sbjct: 136 VDAALAMDNSLFRGRLIKVTAKRTNIPGF 164
>gi|384494630|gb|EIE85121.1| hypothetical protein RO3G_09831 [Rhizopus delemar RA 99-880]
Length = 203
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 102/150 (68%), Gaps = 11/150 (7%)
Query: 41 HEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSAT 100
+ ++ + N ED + K+LE MK+R+K++E EA LR+MQA+VEK M +D
Sbjct: 20 NSNELNTANVEDSSEVDKELEAMKQRVKDMENEAAKLRDMQAEVEKSMHPEED------- 72
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVE 159
KE VDSRS+YVGNVDY +PEE+Q HFQSCGT+NRVTIL DKF G PKG+AYVEF E
Sbjct: 73 ---KEAVDSRSVYVGNVDYGASPEELQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFAE 129
Query: 160 IDAVQNALLLNETELHGRQLKVSAKRTNIP 189
V A+ L+ + R LKVS KRTN+P
Sbjct: 130 PSFVNAAVSLDNSLFRARLLKVSPKRTNVP 159
>gi|449301196|gb|EMC97207.1| hypothetical protein BAUCODRAFT_68306 [Baudoinia compniacensis UAMH
10762]
Length = 223
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 115/171 (67%), Gaps = 18/171 (10%)
Query: 22 ADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQ 81
AD D+DE +HE EH +E+D + +++ MKKR++E+E EA LREMQ
Sbjct: 2 ADTDLDEMKHED--------EHLDRAPDEDDDAQDEEEIAAMKKRVQEMEAEAAKLREMQ 53
Query: 82 AKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 141
A ++ + +++S KE++D RS++VGNVDY +PEE+Q HFQ+CG++NRVTI
Sbjct: 54 ASIDAQTEGLRES---------KEDIDGRSVFVGNVDYGASPEEIQAHFQTCGSINRVTI 104
Query: 142 LTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
L DKF G PKG+AYVEF E + V AL+LN+++ GR +KV KRTN+PGM
Sbjct: 105 LLDKFTGHPKGYAYVEFSEPNLVTQALVLNDSQFRGRAIKVVPKRTNLPGM 155
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 116/188 (61%), Gaps = 9/188 (4%)
Query: 32 EHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV 91
E+ D D + D + N + +LE +K R++E+EEEA L+++Q++V+K+M
Sbjct: 19 ENGQDGDAIMQCDGVKREINEANVDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMG 78
Query: 92 QDSSSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
TS +K EVD+RSIYVGNVDY T EE++QHF CG+VNRVTIL +KF G
Sbjct: 79 SPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDG 138
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRG 206
PKGFAY+EF E D+VQ A+ ++E+ GRQ+KV KRTN PG RG R G RG
Sbjct: 139 HPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGPR----GARG 194
Query: 207 RRPFIPGV 214
R G+
Sbjct: 195 YRGMTRGI 202
>gi|340716338|ref|XP_003396656.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus terrestris]
gi|350406230|ref|XP_003487700.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus impatiens]
Length = 228
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 7/194 (3%)
Query: 32 EHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV 91
E+ D D + D + N + +LE +K R++E+EEEA L+++Q++V+K+M
Sbjct: 19 ENGQDGDAIMQCDGVKRELNEANIDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMG 78
Query: 92 QDSSSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
TS +K EVD+RSIYVGNVDY T EE++QHF CG++NRVTIL +KF G
Sbjct: 79 SPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDG 138
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK-QFRGRRPNTFGFRG 206
PKGFAY+EF E D+VQ A+ ++E+ GRQ+KV KRTN PG+ RG R G+RG
Sbjct: 139 HPKGFAYIEFAERDSVQTAMAIDESMFRGRQIKVMPKRTNRPGLSVTNRGPR-GARGYRG 197
Query: 207 -RRPFIPGVPFVPY 219
R I G + Y
Sbjct: 198 IARGIIRGSAYFGY 211
>gi|326512910|dbj|BAK03362.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 131
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 87/111 (78%), Gaps = 5/111 (4%)
Query: 114 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETE 173
V VDYACTPEEVQQHFQ+CGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ AL LNE+E
Sbjct: 9 VLQVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESE 68
Query: 174 LHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIP-GVP-FVPYGYG 222
LHGRQ+KVS KRTN+PGMKQ R P F P+ G P F PYGYG
Sbjct: 69 LHGRQIKVSPKRTNVPGMKQ---RPPRGFSPYHAYPYRSYGAPYFPPYGYG 116
>gi|195455316|ref|XP_002074665.1| GK23192 [Drosophila willistoni]
gi|194170750|gb|EDW85651.1| GK23192 [Drosophila willistoni]
Length = 225
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 132/228 (57%), Gaps = 34/228 (14%)
Query: 21 DADIDVDEHEH-EHDHDHDHEHEHDADNENEEDPNAN-SKDLEDMKKRLKEIEEEAGALR 78
D DI ++E + E + + E E + NE EE+ + +LE +K R+KE+EEEA ++
Sbjct: 3 DEDITLNEDQLLESLEETNGEQETEITNEVEEEGSMQIDPELEAIKARVKEMEEEAEKIK 62
Query: 79 EMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 136
+MQ++V+K+M G+ ++ + EK+E+D+RS+YVGNVDY + EE++ HF CGT+
Sbjct: 63 QMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTI 122
Query: 137 NRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM---- 191
NRVTIL +K G PKGFAY+EF + V+ AL +NET GRQ+KV +KRTN PG+
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 192 --------------------KQFRGRRPNTFGFRGRRPFIPGVPFVPY 219
FRG R G+RGR + + PY
Sbjct: 183 RFARGSFRGRGARVSRACCHSTFRGARRAIRGYRGRANY-----YAPY 225
>gi|325186974|emb|CCA21518.1| polyadenylatebinding protein 2 putative [Albugo laibachii Nc14]
Length = 235
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 99/156 (63%), Gaps = 23/156 (14%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS----------------------S 96
++EDMK+R+KE+EEEA L EMQ++VE +MG SS S
Sbjct: 38 EIEDMKRRVKEMEEEAAKLSEMQSQVESQMGKNTASSLNELNASASGSSGHAIGSNSNTS 97
Query: 97 TSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYV 155
T+ +D S+YVG VDY TPEE+Q FQSCGT+NRVTIL DKF GQPKG+AY+
Sbjct: 98 TNPNGGSSTALDDSSVYVGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYI 157
Query: 156 EFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
EF DAV++ALLLN+T GRQLKV+ KR N+ G
Sbjct: 158 EFASKDAVESALLLNDTMFRGRQLKVTPKRQNVRGF 193
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 116/188 (61%), Gaps = 9/188 (4%)
Query: 32 EHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV 91
E+ D D + D + N + +LE +K R++E+EEEA L+++Q++V+K+M
Sbjct: 19 ENGQDGDAIMQCDGVKRELSEANIDDPELEAIKARVREMEEEAEKLKQLQSEVDKQMNMG 78
Query: 92 QDSSSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
TS +K EVD+RSIYVGNVDY T EE++QHF CG+VNRVTIL +KF G
Sbjct: 79 SPPGITSPLNMSLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDG 138
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRG 206
PKGFAY+EF E D+VQ A+ ++E+ GRQ+KV KRTN PG RG R G RG
Sbjct: 139 HPKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGPR----GARG 194
Query: 207 RRPFIPGV 214
R G+
Sbjct: 195 YRGMTRGI 202
>gi|291232664|ref|XP_002736265.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Saccoglossus
kowalevskii]
Length = 231
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 103/145 (71%), Gaps = 6/145 (4%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
E EDP +LE +K R++E+EEEA L+EMQ +VEK+M + T + +K EV
Sbjct: 44 EGVEDP-----ELEAIKARVREMEEEAEKLKEMQNEVEKQMNMTSPTQMTPISLEDKVEV 98
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RS+YVGNVDY+ T EE++ HF CG+VNRVTIL DKF G PKGFAY+E+ + D+VQ +
Sbjct: 99 DARSVYVGNVDYSATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEYADKDSVQTS 158
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L L+E+ GRQ+KV KRTN PG+
Sbjct: 159 LALDESLFKGRQIKVLPKRTNRPGI 183
>gi|392592926|gb|EIW82252.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 197
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 100/139 (71%), Gaps = 2/139 (1%)
Query: 55 ANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA-TQAEKEEVDSRSIY 113
A SK+++ MK+R++E+E EA LRE+QA E + + + S + T +K+ DSRS+Y
Sbjct: 27 AESKEIQLMKQRVEEMEREAKKLRELQAAAETDDQSGEGGSGEAMDTLEDKQAADSRSVY 86
Query: 114 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNET 172
VGNVDY TPEE+Q HFQ+CGT+NRVTIL DKF G PKGFAYVEF E D + AL ++ +
Sbjct: 87 VGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGFAYVEFAEPDFIDAALAMDNS 146
Query: 173 ELHGRQLKVSAKRTNIPGM 191
GR +KV+AKRTNIPG
Sbjct: 147 LFRGRLIKVTAKRTNIPGF 165
>gi|409050235|gb|EKM59712.1| hypothetical protein PHACADRAFT_250387 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 100/138 (72%), Gaps = 3/138 (2%)
Query: 57 SKDLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYV 114
SK++ MK+R++E+E EA LRE+QA E + G D+S T+ E+ + D RSI++
Sbjct: 27 SKEILLMKQRVEEMEREANKLRELQAAAENQEHEGGASDASVPMETEDERAQADQRSIFI 86
Query: 115 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETE 173
GNVDYA TPEE+QQHFQ+CGT+NRVTIL DKF G PKGFAYVEF E +++ AL ++ +
Sbjct: 87 GNVDYASTPEEIQQHFQACGTINRVTILCDKFTGHPKGFAYVEFAEPESIDTALAMDNSL 146
Query: 174 LHGRQLKVSAKRTNIPGM 191
GR +KV++KRTNI G
Sbjct: 147 FRGRLIKVTSKRTNIHGF 164
>gi|242004476|ref|XP_002423109.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212506055|gb|EEB10371.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD 93
++D D + D D E ++ N + +LE +K R++E+EEEA L+++Q +VEK++
Sbjct: 16 ENDVDGDEPVDGDAEVDKSGNYDDTELEAIKARVREMEEEAEKLKQLQTEVEKQLNLGSP 75
Query: 94 SSSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQP 149
+ TS+ EK EVD+RSIYVGNVDY EE++QHF CG++NRVTIL +K+ G P
Sbjct: 76 TGLTSSLNLSLEEKLEVDNRSIYVGNVDYGANAEELEQHFHGCGSINRVTILCNKYDGHP 135
Query: 150 KGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
KGFAY+EF + D+VQ A+ ++E+ GRQ+KV+ KRTN PGM
Sbjct: 136 KGFAYIEFADKDSVQTAMAMDESLFRGRQIKVNPKRTNKPGM 177
>gi|193678811|ref|XP_001952437.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Acyrthosiphon pisum]
Length = 246
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 130/209 (62%), Gaps = 26/209 (12%)
Query: 20 MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSK-----DLEDMKKRLKEIEEEA 74
++ ID+ EH ++ D EN + NA+S+ DLE ++ R++E+EEEA
Sbjct: 9 LEGGIDLSSEEHNTQIGIENSMSFDLI-ENGQSNNADSQASADSDLEVIRARVREMEEEA 67
Query: 75 GALREMQAKVEKEMG-----AVQDSSSTSAT----QAEKEEVDSRSIYVGNVDYACTPEE 125
L+++Q++V++EM + + S TSAT + EK E D+RS+YVGNVDYA T EE
Sbjct: 68 EKLKKLQSQVDQEMSNTPVLSSPNCSKTSATYNLSEQEKAEADARSVYVGNVDYAATAEE 127
Query: 126 VQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
++ HF CG++NRVTIL +KF G PKGFAY+EF ++D+V A+ ++++ GRQ+KV+ K
Sbjct: 128 LETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMAMDDSLFRGRQIKVNPK 187
Query: 185 RTNIPGMKQF------RGRRPNTFGFRGR 207
RTN PG+ RGR FRGR
Sbjct: 188 RTNKPGISTTNRPVASRGRAM----FRGR 212
>gi|449679958|ref|XP_002163300.2| PREDICTED: polyadenylate-binding protein 2-like [Hydra
magnipapillata]
Length = 224
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 105/146 (71%), Gaps = 6/146 (4%)
Query: 47 NENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE 106
NE +DP ++E +K R+KE+EEEA L+EMQ + E + + Q + +S ++
Sbjct: 33 NEEADDP-----EIEAIKARVKEMEEEAEKLKEMQKEAESSLMSPQHAVPSSLPGEDQAS 87
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQN 165
+D RS+YVGNVDY+ T E++QHF CG+VNRVTIL DKF G PKGFAYVEF + D+V+N
Sbjct: 88 IDCRSVYVGNVDYSATASELEQHFHGCGSVNRVTILCDKFSGHPKGFAYVEFGDKDSVEN 147
Query: 166 ALLLNETELHGRQLKVSAKRTNIPGM 191
A+ L+++ GRQ+KV+AKRTN+PG+
Sbjct: 148 AVQLSDSLFKGRQIKVTAKRTNVPGI 173
>gi|328725437|ref|XP_003248478.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Acyrthosiphon pisum]
Length = 329
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 130/209 (62%), Gaps = 26/209 (12%)
Query: 20 MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSK-----DLEDMKKRLKEIEEEA 74
++ ID+ EH ++ D EN + NA+S+ DLE ++ R++E+EEEA
Sbjct: 92 LEGGIDLSSEEHNTQIGIENSMSFDLI-ENGQSNNADSQASADSDLEVIRARVREMEEEA 150
Query: 75 GALREMQAKVEKEMG-----AVQDSSSTSAT----QAEKEEVDSRSIYVGNVDYACTPEE 125
L+++Q++V++EM + + S TSAT + EK E D+RS+YVGNVDYA T EE
Sbjct: 151 EKLKKLQSQVDQEMSNTPVLSSPNCSKTSATYNLSEQEKAEADARSVYVGNVDYAATAEE 210
Query: 126 VQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
++ HF CG++NRVTIL +KF G PKGFAY+EF ++D+V A+ ++++ GRQ+KV+ K
Sbjct: 211 LETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMAMDDSLFRGRQIKVNPK 270
Query: 185 RTNIPGMKQF------RGRRPNTFGFRGR 207
RTN PG+ RGR FRGR
Sbjct: 271 RTNKPGISTTNRPVASRGRA----MFRGR 295
>gi|326518878|dbj|BAJ92600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 129/209 (61%), Gaps = 26/209 (12%)
Query: 20 MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSK-----DLEDMKKRLKEIEEEA 74
++ ID+ EH ++ D EN + N +S+ DLE ++ R++E+EEEA
Sbjct: 9 LEGGIDLSSEEHNTQISLENSMSFDLI-ENGQSNNVDSQASADSDLEVIRARVREMEEEA 67
Query: 75 GALREMQAKVEKEMG-----AVQDSSSTSAT----QAEKEEVDSRSIYVGNVDYACTPEE 125
L+++Q++V++EM + + S TSAT + EK E D+RS+YVGNVDYA T EE
Sbjct: 68 EKLKKLQSQVDQEMSNTPVLSSPNCSKTSATYNLSEQEKAEADARSVYVGNVDYAATAEE 127
Query: 126 VQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
++ HF CG++NRVTIL +KF G PKGFAY+EF ++D+V A+ ++++ GRQ+KV+ K
Sbjct: 128 LETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDSVNTAMAMDDSLFRGRQIKVNPK 187
Query: 185 RTNIPGMKQF------RGRRPNTFGFRGR 207
RTN PG+ RGR FRGR
Sbjct: 188 RTNKPGISTTNRPVASRGRAM----FRGR 212
>gi|342320561|gb|EGU12501.1| Polyadenylate-binding protein 2 [Rhodotorula glutinis ATCC 204091]
Length = 238
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/145 (55%), Positives = 99/145 (68%), Gaps = 7/145 (4%)
Query: 50 EEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ-----DSSSTSATQAEK 104
++DP A +L MK R+ E+E EA LRE+ A E G D S + + ++
Sbjct: 52 DDDPEA--AELAAMKARVAEMEAEAAKLRELTAASEAAAGGGSAASNGDGSDVNMSDEDR 109
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQ 164
+ VD+RSIYVGNVDY TPEE+QQHF SCGT+NRVTIL DK+ PKG+AYVEF E VQ
Sbjct: 110 QAVDARSIYVGNVDYHATPEEIQQHFASCGTINRVTILFDKYTGPKGYAYVEFAEPSLVQ 169
Query: 165 NALLLNETELHGRQLKVSAKRTNIP 189
NAL LNE+ L GRQ+KVS KRTN+P
Sbjct: 170 NALHLNESVLRGRQIKVSEKRTNLP 194
>gi|195029099|ref|XP_001987412.1| GH21908 [Drosophila grimshawi]
gi|193903412|gb|EDW02279.1| GH21908 [Drosophila grimshawi]
Length = 224
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 133/227 (58%), Gaps = 33/227 (14%)
Query: 21 DADIDVDEHEHEHDHDHDH-EHEHDADNENEEDPNAN-SKDLEDMKKRLKEIEEEAGALR 78
D DI ++E + D + E E + E EE+ + +LE +K R+KE+EEEA ++
Sbjct: 3 DEDITLNEDQLLESLDETNGEQEAEIVTETEEEGSMQIDPELEAIKARVKEMEEEAEKIK 62
Query: 79 EMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 136
+MQ++V+K+M G+ ++ + EK+E+D+RS+YVGNVDY + EE++ HF CGT+
Sbjct: 63 QMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTI 122
Query: 137 NRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK--- 192
NRVTIL +K G PKGFAY+EF + V+ AL +NET GRQ+KV +KRTN PG+
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 193 -----QFRGRRP--------NTF-------GFRGRRPFIPGVPFVPY 219
FRGR +TF G+RGR + + PY
Sbjct: 183 RFARGSFRGRGARVSRSCCHSTFRGARRAIGYRGRANY-----YAPY 224
>gi|171677925|ref|XP_001903913.1| hypothetical protein [Podospora anserina S mat+]
gi|170937031|emb|CAP61689.1| unnamed protein product [Podospora anserina S mat+]
Length = 209
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 97/133 (72%), Gaps = 10/133 (7%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDY 119
+ MK+R+ E+E EA LREMQA +++E +QD +KE++D+RS++VGNVDY
Sbjct: 31 ISAMKRRVAEMEAEAAKLREMQASMDQERQGLQD---------DKEDIDNRSVFVGNVDY 81
Query: 120 ACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
+ +PEE+Q HF CG++NRVTIL DKF GQPKG+AYVEF E + V AL+LN++ GR
Sbjct: 82 SASPEELQSHFGDCGSINRVTILLDKFTGQPKGYAYVEFSEPNMVAQALVLNDSLFKGRN 141
Query: 179 LKVSAKRTNIPGM 191
+KV KRTN+PGM
Sbjct: 142 IKVEPKRTNLPGM 154
>gi|195121132|ref|XP_002005075.1| GI19259 [Drosophila mojavensis]
gi|193910143|gb|EDW09010.1| GI19259 [Drosophila mojavensis]
Length = 224
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 133/227 (58%), Gaps = 33/227 (14%)
Query: 21 DADIDVDEHEH-EHDHDHDHEHEHDADNENEEDPNAN-SKDLEDMKKRLKEIEEEAGALR 78
D DI ++E + E + + E E E EE+ + +LE +K R+KE+EEEA ++
Sbjct: 3 DEDITLNEDQLLESLEETNGEQETGIATEAEEEGSMQIDPELEAIKARVKEMEEEAEKIK 62
Query: 79 EMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 136
+MQ++V+K+M G+ ++ + EK+E+D+RS+YVGNVDY + EE++ HF CGT+
Sbjct: 63 QMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTI 122
Query: 137 NRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK--- 192
NRVTIL +K G PKGFAY+EF + V+ AL +NET GRQ+KV +KRTN PG+
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 193 -----QFRGRRP--------NTF-------GFRGRRPFIPGVPFVPY 219
FRGR +TF G+RGR + + PY
Sbjct: 183 RFARGSFRGRGARVSRACCHSTFRGARRAIGYRGRANY-----YAPY 224
>gi|17136784|ref|NP_476902.1| Pabp2, isoform A [Drosophila melanogaster]
gi|24586513|ref|NP_724648.1| Pabp2, isoform B [Drosophila melanogaster]
gi|75009760|sp|Q7KNF2.1|PABP2_DROME RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; Short=dPABP2; AltName:
Full=Nuclear poly(A)-binding protein 1; AltName:
Full=Poly(A)-binding protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1; AltName:
Full=Protein rox2
gi|6007612|gb|AAF00976.1|AF116341_1 poly(A)-binding protein II [Drosophila melanogaster]
gi|7304089|gb|AAF59127.1| Pabp2, isoform A [Drosophila melanogaster]
gi|17944423|gb|AAL48102.1| RE74211p [Drosophila melanogaster]
gi|18447531|gb|AAL68327.1| RE69521p [Drosophila melanogaster]
gi|21627704|gb|AAM68852.1| Pabp2, isoform B [Drosophila melanogaster]
gi|220949012|gb|ACL87049.1| Pabp2-PA [synthetic construct]
gi|220958188|gb|ACL91637.1| Pabp2-PA [synthetic construct]
Length = 224
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 134/227 (59%), Gaps = 33/227 (14%)
Query: 21 DADIDVDEHEH-EHDHDHDHEHEHDADNENEEDPNAN-SKDLEDMKKRLKEIEEEAGALR 78
D DI ++E + E + + E E + E EE+ + +LE +K R+KE+EEEA ++
Sbjct: 3 DEDITLNEDQLLESLEETNGEQETEIATEVEEEGSMQIDPELEAIKARVKEMEEEAEKIK 62
Query: 79 EMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 136
+MQ++V+K+M G+ ++ + EK+E+D+RS+YVGNVDY + EE++ HF CGT+
Sbjct: 63 QMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTI 122
Query: 137 NRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK--- 192
NRVTIL +K G PKGFAY+EF + V+ AL +NET GRQ+KV +KRTN PG+
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 193 -----QFRGRRP--------NTF-------GFRGRRPFIPGVPFVPY 219
FRGR +TF G+RGR + + PY
Sbjct: 183 RFARGSFRGRGARVSRACCHSTFRGARRAMGYRGRANY-----YAPY 224
>gi|606751|gb|AAA73522.1| RNA binding protein [Drosophila melanogaster]
Length = 224
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 134/227 (59%), Gaps = 33/227 (14%)
Query: 21 DADIDVDEHEH-EHDHDHDHEHEHDADNENEEDPNAN-SKDLEDMKKRLKEIEEEAGALR 78
D DI ++E + E + + E E + E EE+ + +LE +K R+KE+EEEA ++
Sbjct: 3 DEDITLNEDQLLESLEETNGEQETEIATEVEEEGSMQIDPELEAIKARVKEMEEEAEKIK 62
Query: 79 EMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 136
+MQ++V+K+M G+ ++ + EK+E+D+RS+YVGNVDY + EE++ HF CGT+
Sbjct: 63 QMQSEVDKQMRGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTI 122
Query: 137 NRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK--- 192
NRVTIL +K G PKGFAY+EF + V+ AL +NET GRQ+KV +KRTN PG+
Sbjct: 123 NRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTN 182
Query: 193 -----QFRGRRP--------NTF-------GFRGRRPFIPGVPFVPY 219
FRGR +TF G+RGR + + PY
Sbjct: 183 RFARGSFRGRGARVSRACCHSTFRGARRAMGYRGRANY-----YAPY 224
>gi|452822710|gb|EME29727.1| RNA-binding protein [Galdieria sulphuraria]
Length = 198
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 94/134 (70%), Gaps = 14/134 (10%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+LE MKKRL+E+EEEA L+E+Q E A + SS EEVD RS+YVGNVD
Sbjct: 34 ELEAMKKRLQEMEEEANRLKEVQ-----EQSASEVPSS--------EEVDRRSVYVGNVD 80
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y TPEE+Q HF+ CGT+NRVTIL DKF G PKGFAY+EF + NA++LNE+ GR
Sbjct: 81 YGSTPEELQAHFKECGTINRVTILCDKFTGHPKGFAYIEFATEEGANNAVILNESLFRGR 140
Query: 178 QLKVSAKRTNIPGM 191
LKVS KRTN+PG+
Sbjct: 141 NLKVSIKRTNVPGI 154
>gi|326469996|gb|EGD94005.1| hypothetical protein TESG_01534 [Trichophyton tonsurans CBS 112818]
Length = 186
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 102/145 (70%), Gaps = 10/145 (6%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
+N+E + +++ M++RL ++E EA L EMQA ++++ T + +KE++
Sbjct: 14 DNQEKAGDDEEEIAAMRERLTKMESEAAKLHEMQASLDQQ---------TENLREDKEDI 64
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSI+VGNVDYA +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V A
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 124
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L+LNE+ GR +KV KRTN+PGM
Sbjct: 125 LVLNESLFRGRNIKVVPKRTNLPGM 149
>gi|367030447|ref|XP_003664507.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
gi|347011777|gb|AEO59262.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
Length = 186
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 99/134 (73%), Gaps = 10/134 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
D E+ +KR+ E+E EA LREMQA +++ A QD + +KE+VD+RSI+VGNVD
Sbjct: 19 DGENEEKRVAEMEAEAAKLREMQASLDQ---ARQDLTE------DKEDVDNRSIFVGNVD 69
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y+ +PEE+Q HFQSCG++NRVTIL DKF GQPKG+AYVEF E V AL+LN++ GR
Sbjct: 70 YSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPQLVAQALVLNDSVFKGR 129
Query: 178 QLKVSAKRTNIPGM 191
+KV KRTNIPGM
Sbjct: 130 NIKVEPKRTNIPGM 143
>gi|189195646|ref|XP_001934161.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980040|gb|EDU46666.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 207
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 108/159 (67%), Gaps = 11/159 (6%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD 93
D D + + E D + EDPN +++ M++R++E+EEEA LR+MQA ++ E +++
Sbjct: 3 DVDTELKREEDERLDTAEDPN-EEEEISAMRRRVQEMEEEAQKLRQMQAAIDNERHEMRE 61
Query: 94 SSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF 152
S KE+VD+RS++VGNVDY +PEE+Q HFQS G++NRVTIL DKF G PKG+
Sbjct: 62 S---------KEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGY 112
Query: 153 AYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
AYVEF E V AL+L+ +E R LKV KRTN+PGM
Sbjct: 113 AYVEFTEPHLVNEALVLDGSEFRNRNLKVVPKRTNLPGM 151
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 121/206 (58%), Gaps = 26/206 (12%)
Query: 35 HDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDS 94
HD ++ D D +DP +LE +K R++E+EEEA L+++Q++V+K+M
Sbjct: 25 HDDALLNDTDLDGTGGDDP-----ELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPP 79
Query: 95 SSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPK 150
TS EK EVD+RSIYVGNVDY T EE++QHF CG++NRVTIL +K+ G PK
Sbjct: 80 GLTSPLNMSLEEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPK 139
Query: 151 GFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ----------FRGRRPN 200
GFAY+EF + D+VQ A+ ++E+ GR +KV KRTN PG+ FRG R
Sbjct: 140 GFAYIEFGDRDSVQTAMAMDESLFRGRPIKVMPKRTNRPGLSTTNRPPRGRGAFRGARGV 199
Query: 201 TFGFRG-----RRP--FIPGVPFVPY 219
GF RRP + G F PY
Sbjct: 200 GRGFYAGYRPMRRPRSYRRGGYFSPY 225
>gi|301097894|ref|XP_002898041.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
gi|262106486|gb|EEY64538.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
Length = 225
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 118/199 (59%), Gaps = 30/199 (15%)
Query: 21 DADIDVDEHEHEHDHDHDHEHEHDADNEN----EEDPNANSKDLEDMKKRLKEIEEEAGA 76
D +DV++ E E D E EE A ++EDMK+R+KE+EEEA
Sbjct: 3 DEAVDVNKLEAEAASLVGESEASKTDGETAAAPEESTEAVDAEIEDMKRRVKEMEEEAAK 62
Query: 77 LREMQAKVEKEMGAVQDSSST----------SATQAEKEEVDSRSIYVGNVDYACTPEEV 126
L EMQ++VE +MG ++++ST +A A+ ++D SIY+G VDY TPEE+
Sbjct: 63 LSEMQSEVESQMG--KNTASTLNEMNGGAAGAAANAQPAQMDDTSIYIGQVDYGSTPEEL 120
Query: 127 QQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
Q FQSCGT+NRVTIL DKF GQPKG+AY+EF DAV++ALLLN+T GRQLKV+ KR
Sbjct: 121 QALFQSCGTINRVTILCDKFTGQPKGYAYIEFASHDAVESALLLNDTMFRGRQLKVTPKR 180
Query: 186 TNIPGMKQFRGRRPNTFGF 204
N GF
Sbjct: 181 Q-------------NVRGF 186
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 108/165 (65%), Gaps = 10/165 (6%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA---EKEEV 107
EDP D+E + R+KEIEEEA +R+MQ VEK+M SS S+T A EK E
Sbjct: 34 EDP-----DMEALTNRMKEIEEEAQLIRQMQNDVEKQMNMSSSSSLASSTLASMEEKIEA 88
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
DSRSIYVGNVDY T EE++ HF CG+VNRVTILTDK+ G PKGFAY+EF + ++VQ A
Sbjct: 89 DSRSIYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKYTGHPKGFAYIEFADKESVQTA 148
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFI 211
+ L+E+ GRQ+KV KRTN PG+ R P G G R +
Sbjct: 149 MALDESLFRGRQIKVCPKRTNRPGVSTTN-RPPRARGRGGARVIV 192
>gi|395330550|gb|EJF62933.1| RNA-binding domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 168
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEK-EMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYAC 121
MK+R++E+E EA LRE+QA EK E GA T+ +K D+RSIYVGNVDY+
Sbjct: 5 MKQRVEEMEREANKLRELQAAAEKAEQGAQGGEQVPMETEEDKAAADARSIYVGNVDYSA 64
Query: 122 TPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
TPEE+QQHFQ+CGT+NRVTIL DKF G PKG+AYVEF E + + AL ++ + GR +K
Sbjct: 65 TPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEFIDAALAMDNSLFRGRLIK 124
Query: 181 VSAKRTNIPGM 191
V+ KRTNIPG
Sbjct: 125 VTPKRTNIPGF 135
>gi|195332369|ref|XP_002032871.1| GM21011 [Drosophila sechellia]
gi|195581470|ref|XP_002080557.1| GD10545 [Drosophila simulans]
gi|194124841|gb|EDW46884.1| GM21011 [Drosophila sechellia]
gi|194192566|gb|EDX06142.1| GD10545 [Drosophila simulans]
Length = 229
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 32/188 (17%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGN 116
+LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGN
Sbjct: 47 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 106
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET
Sbjct: 107 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 166
Query: 176 GRQLKVSAKRTNIPGM------------------------KQFRGRRPNTFGFRGRRPFI 211
GRQ+KV +KRTN PG+ FRG R G+RGR +
Sbjct: 167 GRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARVSRACCHSTFRGARRAIRGYRGRANY- 225
Query: 212 PGVPFVPY 219
+ PY
Sbjct: 226 ----YAPY 229
>gi|170036993|ref|XP_001846345.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
gi|167879973|gb|EDS43356.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
Length = 218
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 113/177 (63%), Gaps = 21/177 (11%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRSIYVGNV 117
+LE +K R+KE+EEEA L+++Q++V K+M + +T AE K E+D+RSIYVGNV
Sbjct: 41 ELEAIKARVKEMEEEAEKLKQLQSEVTKQMTLGSPTGATPIMSAEEKAEIDNRSIYVGNV 100
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY T EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET G
Sbjct: 101 DYGATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRG 160
Query: 177 RQLKVSAKRTNIPGM-------KQFRGR-----RPNTFGF-RG-RRPFIPGVPFVPY 219
RQ+KV+ KRTN PGM + RGR R +G RG RRP +VPY
Sbjct: 161 RQIKVNPKRTNRPGMCTTNRFPRGMRGRASRVSRACCYGAHRGTRRP-----AYVPY 212
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 114/179 (63%), Gaps = 11/179 (6%)
Query: 35 HDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDS 94
HD ++ D D +DP +LE +K R++E+EEEA L+++Q++V+K+M
Sbjct: 25 HDDALLNDTDLDGTGGDDP-----ELEAIKARVREMEEEAEKLKQLQSEVDKQMNMGSPP 79
Query: 95 SSTSATQA---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPK 150
TS EK EVD+RSIYVGNVDY T EE++QHF CG++NRVTIL +K+ G PK
Sbjct: 80 GLTSPLNMSLEEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPK 139
Query: 151 GFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFG-FRGRR 208
GFAY+EF + D+VQ A+ ++E+ GR +KV KRTN PG+ R P G FRG R
Sbjct: 140 GFAYIEFGDRDSVQTAMAMDESLFRGRPIKVMPKRTNRPGLSTTN-RPPRGRGAFRGAR 197
>gi|213409842|ref|XP_002175691.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003738|gb|EEB09398.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 174
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 103/148 (69%), Gaps = 10/148 (6%)
Query: 45 ADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEK 104
+D+++ + + ++L+ MK R+ E+E EA LREMQ +++KE A+++ +K
Sbjct: 2 SDDQSTDVVDVQDQELQAMKARVAEMEAEAEKLREMQEQLDKESEALRN---------DK 52
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAV 163
E +D++S+YVGNVDY+ TPEE+Q HF CG +NRVTIL DKF G PKGFAY+EF E V
Sbjct: 53 EALDAQSVYVGNVDYSVTPEELQAHFAECGPINRVTILCDKFTGHPKGFAYIEFAEPSVV 112
Query: 164 QNALLLNETELHGRQLKVSAKRTNIPGM 191
NALL N + LH R LKV+ KR NIPGM
Sbjct: 113 PNALLRNGSMLHDRPLKVTPKRMNIPGM 140
>gi|125808904|ref|XP_001360914.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
gi|109892812|sp|Q28ZX3.1|PABP2_DROPS RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|54636086|gb|EAL25489.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 32/188 (17%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGN 116
+LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGN 102
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 162
Query: 176 GRQLKVSAKRTNIPGM------------------------KQFRGRRPNTFGFRGRRPFI 211
GRQ+KV +KRTN PG+ FRG R G+RGR +
Sbjct: 163 GRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARASRACCHSTFRGARRAIRGYRGRANY- 221
Query: 212 PGVPFVPY 219
+ PY
Sbjct: 222 ----YAPY 225
>gi|398389564|ref|XP_003848243.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
gi|339468117|gb|EGP83219.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
Length = 199
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 96/130 (73%), Gaps = 10/130 (7%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MKKR++E+E EA LRE+QA ++ + ++++ KE++D+RS++VGNVDY +
Sbjct: 36 MKKRVEEMEAEAAKLRELQANIDSQADNLREN---------KEDIDARSVFVGNVDYGAS 86
Query: 123 PEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E + V AL+LN++ GR +KV
Sbjct: 87 PEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTPALVLNDSTFRGRAIKV 146
Query: 182 SAKRTNIPGM 191
KRTN+PGM
Sbjct: 147 VPKRTNLPGM 156
>gi|164430255|gb|ABY55455.1| Pabp2 [Drosophila mauritiana]
gi|164430257|gb|ABY55456.1| Pabp2 [Drosophila mauritiana]
gi|164430259|gb|ABY55457.1| Pabp2 [Drosophila mauritiana]
gi|164430261|gb|ABY55458.1| Pabp2 [Drosophila mauritiana]
gi|164430263|gb|ABY55459.1| Pabp2 [Drosophila mauritiana]
gi|188504221|gb|ACD56226.1| PABP2 [Drosophila simulans]
gi|188504223|gb|ACD56227.1| PABP2 [Drosophila simulans]
gi|188504225|gb|ACD56228.1| PABP2 [Drosophila simulans]
gi|188504227|gb|ACD56229.1| PABP2 [Drosophila simulans]
gi|188504229|gb|ACD56230.1| PABP2 [Drosophila sechellia]
Length = 228
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 116/187 (62%), Gaps = 31/187 (16%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGN 116
+LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGN
Sbjct: 47 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 106
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET
Sbjct: 107 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 166
Query: 176 GRQLKVSAKRTNIPGMK--------QFRGRRP--------NTF-------GFRGRRPFIP 212
GRQ+KV +KRTN PG+ FRGR +TF G+RGR +
Sbjct: 167 GRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARVSRACCHSTFRGARRAMGYRGRANY-- 224
Query: 213 GVPFVPY 219
+ PY
Sbjct: 225 ---YAPY 228
>gi|195474616|ref|XP_002089587.1| Pabp2 [Drosophila yakuba]
gi|194175688|gb|EDW89299.1| Pabp2 [Drosophila yakuba]
Length = 225
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 32/188 (17%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGN 116
+LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 162
Query: 176 GRQLKVSAKRTNIPGM------------------------KQFRGRRPNTFGFRGRRPFI 211
GRQ+KV +KRTN PG+ FRG R G+RGR +
Sbjct: 163 GRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARVSRACCHSTFRGARRAIRGYRGRANY- 221
Query: 212 PGVPFVPY 219
+ PY
Sbjct: 222 ----YAPY 225
>gi|390362827|ref|XP_799120.2| PREDICTED: polyadenylate-binding protein 2-like [Strongylocentrotus
purpuratus]
Length = 249
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 102/147 (69%), Gaps = 4/147 (2%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKE 105
EE+ +LE +K R++E+EEEA L+EMQ +V+K+M + +A + EK
Sbjct: 38 TEENAGIEDAELEAIKARVREMEEEAEKLKEMQNEVDKQMNLSSPPPAQAAPHLSLEEKG 97
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQ 164
EVD+RS+YVGNVDY+ T EE++ HF CG +NRVTIL DKF G PKG+AYVEFVE D++
Sbjct: 98 EVDARSVYVGNVDYSATAEELESHFHGCGPINRVTILCDKFTGHPKGYAYVEFVEKDSID 157
Query: 165 NALLLNETELHGRQLKVSAKRTNIPGM 191
A LN + GRQ++V+AKRTN PG+
Sbjct: 158 TACTLNLSLFKGRQIRVNAKRTNRPGI 184
>gi|158292594|ref|XP_313998.3| AGAP005117-PA [Anopheles gambiae str. PEST]
gi|157017065|gb|EAA09415.5| AGAP005117-PA [Anopheles gambiae str. PEST]
Length = 221
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 103/151 (68%), Gaps = 5/151 (3%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRSIYVGNV 117
+LE +K R+KE+EEEA L+++Q++V K+M + ST AE K EVD+RSIYVGNV
Sbjct: 41 ELEAIKARVKEMEEEAEKLKQLQSEVTKQMTLGSPTGSTPMLTAEEKAEVDNRSIYVGNV 100
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY T EE++ HF CG +NRVTIL +K G PKGFAY+EF + V+ AL +NET G
Sbjct: 101 DYGATAEELEAHFHGCGAINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRG 160
Query: 177 RQLKVSAKRTNIPGMKQFRGRRPNTFGFRGR 207
RQ+KV+ KRTN PGM Q R P G RGR
Sbjct: 161 RQIKVNPKRTNRPGMCQ-TNRFPR--GVRGR 188
>gi|68471223|ref|XP_720388.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|77022430|ref|XP_888659.1| hypothetical protein CaO19_7097 [Candida albicans SC5314]
gi|46442253|gb|EAL01544.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|76573472|dbj|BAE44556.1| hypothetical protein [Candida albicans]
gi|238883199|gb|EEQ46837.1| polyadenylate-binding protein 2 [Candida albicans WO-1]
Length = 187
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 104/151 (68%), Gaps = 9/151 (5%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
EN++ P+ NS E++K +L+E+E+E LRE+ +++ E + T T EK +
Sbjct: 8 ENQQVPSENS---EEVKNKLEEMEQETAKLRELHSQLSSE----STNGVTHPTDEEKRDT 60
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSIY+GNVDY TP E+QQHF S G VNRVTILT+KF GQPKGFAY+EF + DAV A
Sbjct: 61 DARSIYIGNVDYGSTPLELQQHFSSAGVVNRVTILTNKFTGQPKGFAYLEFADTDAVNKA 120
Query: 167 L-LLNETELHGRQLKVSAKRTNIPGMKQFRG 196
+ L+ + RQLKVSAKRTNIPG+ RG
Sbjct: 121 VATLDGSTFRERQLKVSAKRTNIPGISVKRG 151
>gi|195383378|ref|XP_002050403.1| GJ22134 [Drosophila virilis]
gi|194145200|gb|EDW61596.1| GJ22134 [Drosophila virilis]
Length = 224
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 116/187 (62%), Gaps = 31/187 (16%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGN 116
+LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGN 102
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEYVETALAMNETLFR 162
Query: 176 GRQLKVSAKRTNIPGMK--------QFRGRRP--------NTF-------GFRGRRPFIP 212
GRQ+KV +KRTN PG+ FRGR +TF G+RGR +
Sbjct: 163 GRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARVSRACCHSTFRGARRAIGYRGRANY-- 220
Query: 213 GVPFVPY 219
+ PY
Sbjct: 221 ---YAPY 224
>gi|321477676|gb|EFX88634.1| hypothetical protein DAPPUDRAFT_206317 [Daphnia pulex]
Length = 222
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 118/173 (68%), Gaps = 5/173 (2%)
Query: 24 IDVDEHEHEHDHDHDHEHEHDADNEN---EEDPNANSKDLEDMKKRLKEIEEEAGALREM 80
+ ++E +HE + + +D +N + D +LE +K R++E+EEEA L+ +
Sbjct: 7 LKMEELDHEAYESENLQDTNDFTGDNGAGDTDSMMEDPELEAIKARVREMEEEAEKLKML 66
Query: 81 QAKVEKEMGA-VQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 139
Q++VEK++ + +SS + + EK EVD+RS++VGNVDY T EE++QHF CG++NRV
Sbjct: 67 QSEVEKQINSPTGVASSPNMSVEEKMEVDARSVFVGNVDYGATAEELEQHFHGCGSINRV 126
Query: 140 TILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
TIL +K+ GQPKGFAY+EF + D+VQ A+ L+E+ GRQ+KV KRTN PG+
Sbjct: 127 TILCNKWDGQPKGFAYIEFGDKDSVQTAMALDESLFRGRQIKVMLKRTNRPGI 179
>gi|194863574|ref|XP_001970507.1| GG23338 [Drosophila erecta]
gi|190662374|gb|EDV59566.1| GG23338 [Drosophila erecta]
Length = 224
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 116/187 (62%), Gaps = 31/187 (16%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGN 116
+LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 162
Query: 176 GRQLKVSAKRTNIPGMK--------QFRGRRP--------NTF-------GFRGRRPFIP 212
GRQ+KV +KRTN PG+ FRGR +TF G+RGR +
Sbjct: 163 GRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARVSRACCHSTFRGARRAMGYRGRANY-- 220
Query: 213 GVPFVPY 219
+ PY
Sbjct: 221 ---YAPY 224
>gi|194757557|ref|XP_001961031.1| GF13666 [Drosophila ananassae]
gi|190622329|gb|EDV37853.1| GF13666 [Drosophila ananassae]
Length = 224
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGN 116
+LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFR 162
Query: 176 GRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRR 208
GRQ+KV +KRTN PG+ TF RG R
Sbjct: 163 GRQIKVMSKRTNRPGLSTTNRFARGTFRGRGAR 195
>gi|452842735|gb|EME44671.1| hypothetical protein DOTSEDRAFT_72205 [Dothistroma septosporum
NZE10]
Length = 238
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 94/133 (70%), Gaps = 10/133 (7%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDY 119
+ MKKR++E+E EA LREMQA ++ + +++S KE++D+RSI+VGNVDY
Sbjct: 50 IAAMKKRVEEMEAEAAKLREMQASIDSQSDNLRES---------KEDIDARSIFVGNVDY 100
Query: 120 ACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
+PEE+Q HFQS G++NRVTIL DKF G PKG+AYVEF E V AL+LNE+ R
Sbjct: 101 GASPEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFSEPQLVTQALVLNESVFRSRN 160
Query: 179 LKVSAKRTNIPGM 191
+KV KRTN+PGM
Sbjct: 161 IKVVPKRTNLPGM 173
>gi|169604234|ref|XP_001795538.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
gi|111066400|gb|EAT87520.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
Length = 214
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 106/159 (66%), Gaps = 11/159 (6%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD 93
D + + + E D + EDPN +++ M++R++E+EEEA LREMQ ++ E +++
Sbjct: 3 DVEIEQKREEDERLDTAEDPN-EEEEISAMRRRVQEMEEEAAKLREMQQSLDTERHEMRE 61
Query: 94 SSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF 152
S KE+VD+RS++VGNVDY +PEE+Q HFQS G++NRVTIL DKF G PKG+
Sbjct: 62 S---------KEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGY 112
Query: 153 AYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
AYVEF E V AL+L+ + R LKV KRTN+PGM
Sbjct: 113 AYVEFTEPSLVNEALVLDNSVFRSRNLKVVPKRTNLPGM 151
>gi|330933365|ref|XP_003304145.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
gi|311319437|gb|EFQ87756.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
Length = 193
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 109/164 (66%), Gaps = 11/164 (6%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD 93
D + + + E D + EDPN +++ M++R++E+EEEA LR+MQA ++ E +++
Sbjct: 3 DVEIEQKREEDERLDTAEDPN-EEEEISAMRRRVQEMEEEAQKLRQMQAAIDNERHEMRE 61
Query: 94 SSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF 152
S KE+VD+RS++VGNVDY +PEE+Q HFQS G++NRVTIL DKF G PKG+
Sbjct: 62 S---------KEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGY 112
Query: 153 AYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRG 196
AYVEF E V AL+L+ +E R LKV KRTN+PG RG
Sbjct: 113 AYVEFTEPHLVNEALVLDNSEFRSRNLKVVPKRTNLPGGYGGRG 156
>gi|195153805|ref|XP_002017814.1| GL17107 [Drosophila persimilis]
gi|194113610|gb|EDW35653.1| GL17107 [Drosophila persimilis]
Length = 225
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 113/188 (60%), Gaps = 32/188 (17%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSIYVGN 116
+LE +K R+KE+EEEA +++MQ++V+K+M G+ ++ + EK+E+D+RS+YVGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGN 102
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY + EE++ HF CGT+NRVTIL +K G PKGFA++EF + V+ AL +NET
Sbjct: 103 VDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAFIEFGSKEFVETALAMNETLFR 162
Query: 176 GRQLKVSAKRTNIPGM------------------------KQFRGRRPNTFGFRGRRPFI 211
GRQ+KV +KRTN PG+ FRG R G+RGR +
Sbjct: 163 GRQIKVMSKRTNRPGLSTTNRFARGSFRGRGARASRACCHSTFRGARRAIRGYRGRANY- 221
Query: 212 PGVPFVPY 219
+ PY
Sbjct: 222 ----YAPY 225
>gi|210076154|ref|XP_504024.2| YALI0E16500p [Yarrowia lipolytica]
gi|199426927|emb|CAG79617.2| YALI0E16500p [Yarrowia lipolytica CLIB122]
Length = 184
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 98/142 (69%), Gaps = 12/142 (8%)
Query: 53 PNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRS 111
P S ++E M+ RL++++EEA L MQ QD++ +S E +EE+D+RS
Sbjct: 20 PVPASAEMEAMQARLQQLQEEASKLESMQ----------QDATKSSEDLKEDQEEIDARS 69
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLN 170
IYVGNVDY TP+E+++HF+ CG+V RVTIL DKF G PKG+AY+EF E V A+ LN
Sbjct: 70 IYVGNVDYGATPQELEKHFEKCGSVQRVTILMDKFTGNPKGYAYIEFAEPKDVAQAVTLN 129
Query: 171 ETELHGRQLKVSAKRTNIPGMK 192
++E RQLKVSAKRTNIPG K
Sbjct: 130 DSEFRQRQLKVSAKRTNIPGFK 151
>gi|451855129|gb|EMD68421.1| hypothetical protein COCSADRAFT_272630 [Cochliobolus sativus
ND90Pr]
gi|452004159|gb|EMD96615.1| hypothetical protein COCHEDRAFT_1018478 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 11/159 (6%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD 93
D + + + E D + EDPN +++ M++R++E+EEEA LR+MQ ++ E +++
Sbjct: 3 DVEAEQKREEDERLDTAEDPN-EEEEISAMRRRVQEMEEEAQKLRQMQQAIDNERHEMRE 61
Query: 94 SSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF 152
S KE+VD+RS++VGNVDY +PEE+Q HFQS G++NRVTIL DKF G PKG+
Sbjct: 62 S---------KEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGY 112
Query: 153 AYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
AYVEF E V AL+L+ ++ R LKV KRTN+PGM
Sbjct: 113 AYVEFTEPHLVNEALVLDNSQFRNRNLKVVPKRTNLPGM 151
>gi|312373984|gb|EFR21644.1| hypothetical protein AND_16675 [Anopheles darlingi]
Length = 229
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 103/151 (68%), Gaps = 5/151 (3%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRSIYVGNV 117
+LE +K R+KE+EEEA L+++Q++V K+M + ST AE K EVD+RSIYVGNV
Sbjct: 41 ELEAIKARVKEMEEEAEKLKQLQSEVTKQMTLGSPTGSTPMLTAEEKAEVDNRSIYVGNV 100
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY T EE++ HF CG +NRVTIL +K G PKGFAY+EF + V+ AL +NET G
Sbjct: 101 DYGATAEELEAHFHGCGAINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRG 160
Query: 177 RQLKVSAKRTNIPGMKQFRGRRPNTFGFRGR 207
RQ+KV+ KRTN PG+ Q R P G RGR
Sbjct: 161 RQIKVNPKRTNRPGLCQ-TNRFPR--GARGR 188
>gi|390601291|gb|EIN10685.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 194
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 94/135 (69%), Gaps = 6/135 (4%)
Query: 56 NSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVG 115
N ++++ MK+R+KE+EEEA LRE+Q + EKE S S + DSRS+YVG
Sbjct: 20 NPQEIQMMKQRVKEMEEEAAKLRELQEQAEKE-----QSQSGPMDVDDPTAADSRSVYVG 74
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY TPEE+Q HFQ+CG +NRVTIL DKF G PKG+AYVEF E + V A+ L+ +
Sbjct: 75 NVDYGATPEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFSEPEHVDAAVALDNSLF 134
Query: 175 HGRQLKVSAKRTNIP 189
GR LKV+AKRTNIP
Sbjct: 135 RGRLLKVTAKRTNIP 149
>gi|157109621|ref|XP_001650752.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|94469160|gb|ABF18429.1| splicing factor RNPS1 [Aedes aegypti]
gi|108868426|gb|EAT32651.1| AAEL015143-PA [Aedes aegypti]
Length = 220
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 110/178 (61%), Gaps = 22/178 (12%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRSIYVGNV 117
+LE +K R+KE+EEEA L+++Q +V K+M + T AE K E+D+RSIYVGNV
Sbjct: 41 ELEAIKARVKEMEEEAEKLKQLQTEVTKQMTLGSPTGVTPILTAEEKAEIDNRSIYVGNV 100
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY T EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET G
Sbjct: 101 DYGATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRG 160
Query: 177 RQLKVSAKRTNIPGM--------KQFRGR-----RPNTF-GFRG-RRPFIPGVPFVPY 219
RQ+KV+ KRTN PGM RGR R + G RG RRP +VPY
Sbjct: 161 RQIKVNPKRTNRPGMCTTNRFPRGSVRGRGARISRACCYGGHRGSRRP-----AYVPY 213
>gi|393246337|gb|EJD53846.1| RNA-binding domain-containing protein, partial [Auricularia
delicata TFB-10046 SS5]
Length = 170
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 101/135 (74%), Gaps = 5/135 (3%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
+++E MK+R++E+E+EA LREMQA+ E + +S + +K+ VD+RS+YVGNV
Sbjct: 1 QEIEAMKQRVREMEQEALKLREMQAEAEAG----AEGASGVEGEEDKDAVDARSVYVGNV 56
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY+ +PEE+Q HFQSCGT+NRVTIL DKF G PKG+AYVEF E VQ+A++LNE+ G
Sbjct: 57 DYSASPEEIQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFAEPAFVQHAMVLNESLFRG 116
Query: 177 RQLKVSAKRTNIPGM 191
R +KV KRTN+PG
Sbjct: 117 RLIKVVPKRTNVPGF 131
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 96/137 (70%), Gaps = 4/137 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA---EKEEVDSRSIYVG 115
DL +K R++E+EEEA L++MQ +V+K+M TS EK E D+RS+YVG
Sbjct: 43 DLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVG 102
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE++QHF CG++NRVTIL +KF G PKGFAY+EF + D+VQ A+ ++E+
Sbjct: 103 NVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLF 162
Query: 175 HGRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 163 RGRQIKVMPKRTNKPGL 179
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 99/134 (73%), Gaps = 9/134 (6%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
DL+ ++ R++E+ EEA L+++Q++V D ++T ++ EK+E+D RSIYVGNVD
Sbjct: 25 DLDSLRARVREMAEEAEKLKKLQSEV--------DKNTTQLSEQEKKEIDQRSIYVGNVD 76
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y T EE++QHF CG+VNRVTIL DKF G PKGFAY+EF + D+V+ A+ ++++ GR
Sbjct: 77 YGATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFADKDSVETAMAMDDSLFRGR 136
Query: 178 QLKVSAKRTNIPGM 191
Q+KV KRTN+PG+
Sbjct: 137 QIKVLQKRTNMPGI 150
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 96/137 (70%), Gaps = 4/137 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA---EKEEVDSRSIYVG 115
DL +K R++E+EEEA L++MQ +V+K+M TS EK E D+RS+YVG
Sbjct: 43 DLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVG 102
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE++QHF CG++NRVTIL +KF G PKGFAY+EF + D+VQ A+ ++E+
Sbjct: 103 NVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLF 162
Query: 175 HGRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 163 RGRQIKVMPKRTNKPGL 179
>gi|402217494|gb|EJT97574.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 102/172 (59%), Gaps = 18/172 (10%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
D H A+ E+ + + +LE++K R++ +EEEA LR +QA + QD +
Sbjct: 3 DASDAHTPTAEGEDIDLEGYDGSELEEIKARMRLMEEEAATLRSLQADAPVRAPSAQDGA 62
Query: 96 STSA--------------TQAE---KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNR 138
T Q E +E+VD RS+YVGNVDY+ TP ++ HF SCG +NR
Sbjct: 63 GTPVPAPKEGEPNGEHEEIQVEGEAQEDVDKRSVYVGNVDYSATPTDISNHFASCGQINR 122
Query: 139 VTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
VTI+ DKF G PKGF Y+EF E + VQNALLLNE+ L GR + V AKRTNIP
Sbjct: 123 VTIVCDKFSGHPKGFCYIEFAEPETVQNALLLNESMLCGRIISVVAKRTNIP 174
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 98/134 (73%), Gaps = 12/134 (8%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++E+M+K+++E+EEEA L+++ VE++ + ++EEVD RS+Y+G+VD
Sbjct: 21 EIEEMQKKVQEMEEEAEKLKQLTDSVEEQGEGI-----------DREEVDKRSVYIGSVD 69
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y TPEE+Q+HF+SCG +NR+TIL DK+ G PKGFAYVEF + +VQN+LLLN + GR
Sbjct: 70 YGSTPEELQEHFKSCGQINRITILVDKYSGHPKGFAYVEFADEQSVQNSLLLNGSLFRGR 129
Query: 178 QLKVSAKRTNIPGM 191
QLKV KRTN+PG
Sbjct: 130 QLKVMQKRTNVPGF 143
>gi|157109619|ref|XP_001650751.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|108868425|gb|EAT32650.1| AAEL015143-PB [Aedes aegypti]
Length = 222
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRSIYVGNV 117
+LE +K R+KE+EEEA L+++Q +V K+M + T AE K E+D+RSIYVGNV
Sbjct: 41 ELEAIKARVKEMEEEAEKLKQLQTEVTKQMTLGSPTGVTPILTAEEKAEIDNRSIYVGNV 100
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY T EE++ HF CGT+NRVTIL +K G PKGFAY+EF + V+ AL +NET G
Sbjct: 101 DYGATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRG 160
Query: 177 RQLKVSAKRTNIPGM 191
RQ+KV+ KRTN PGM
Sbjct: 161 RQIKVNPKRTNRPGM 175
>gi|112983360|ref|NP_001037644.1| polyadenylate binding protein 2 [Bombyx mori]
gi|109706831|gb|ABG43002.1| polyadenylate binding protein 2 [Bombyx mori]
Length = 218
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 96/137 (70%), Gaps = 4/137 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA---EKEEVDSRSIYVG 115
DL +K R++E+EEEA L++MQ +V+K+M TS EK E D+RS+YVG
Sbjct: 43 DLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVG 102
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE++QHF CG++NRVTIL +K+ G PKGFAY+EF + D+VQ A+ ++E+
Sbjct: 103 NVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLF 162
Query: 175 HGRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 163 RGRQIKVMPKRTNKPGL 179
>gi|448113963|ref|XP_004202460.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359383328|emb|CCE79244.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 211
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 110/166 (66%), Gaps = 11/166 (6%)
Query: 28 EHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKE 87
E ++ ++ E + A N N ++ NA D +D++ R++E+E+EA LRE+ +K+ E
Sbjct: 16 EEQNRNEQVPQSEPQESAANNNNQESNAPKHD-QDVQMRMEEMEKEAAKLRELNSKLNTE 74
Query: 88 MGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF- 146
+ +AT EK+++DSRSIYVGNVDY TP E+QQHF CG VNRVTI +KF
Sbjct: 75 VD--------NATSEEKKDIDSRSIYVGNVDYGATPLELQQHFSGCGVVNRVTIPLNKFS 126
Query: 147 GQPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKVSAKRTNIPGM 191
G PKGFAY+EF +IDAV A+ L+ + R++KV +KRTN+PG+
Sbjct: 127 GSPKGFAYLEFGDIDAVNKAIATLDGSTFRDREIKVLSKRTNVPGL 172
>gi|171474005|gb|AAX31042.2| SJCHGC09749 protein [Schistosoma japonicum]
gi|226468246|emb|CAX69800.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489703|emb|CAX75002.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489705|emb|CAX75003.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489707|emb|CAX75004.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 115/187 (61%), Gaps = 17/187 (9%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSK-----DLEDMKKRLKEIEEEAGALREMQAKVEKEM 88
D DHD + D +ED + + +LE +K+R KEIE +A L +++ ++K
Sbjct: 7 DGDHDVHGDEFGDENGKEDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKS- 65
Query: 89 GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
+ S++++ + +K EVD RS+YVGNVDY T +E++ HF+ CG +NRVTIL +KF G
Sbjct: 66 -PISKSNNSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTG 124
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ------FRGR---R 198
PKGFAY+EF DAV+ A+ L+++ RQLKV KRTN+PGM RGR R
Sbjct: 125 HPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRPPFVRGRARGR 184
Query: 199 PNTFGFR 205
+FGFR
Sbjct: 185 GVSFGFR 191
>gi|146413939|ref|XP_001482940.1| hypothetical protein PGUG_04895 [Meyerozyma guilliermondii ATCC
6260]
gi|146392639|gb|EDK40797.1| hypothetical protein PGUG_04895 [Meyerozyma guilliermondii ATCC
6260]
Length = 220
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 96/133 (72%), Gaps = 10/133 (7%)
Query: 61 EDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYA 120
E +K+R++E+E EA LRE+ A++ ++ G T+ E+ ++DSRSIY+GNVDY
Sbjct: 58 EMIKQRMEEMEREAAKLRELHAQLSEDKGG--------DTEEERRDIDSRSIYIGNVDYG 109
Query: 121 CTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLNE-TELHGRQ 178
TP E+QQHF S G VNRVTILT+K GQPKGFAY+EF ++D V A+ + + HGR+
Sbjct: 110 ATPLELQQHFSSSGVVNRVTILTNKHTGQPKGFAYLEFADVDGVNKAVATQDGSSFHGRE 169
Query: 179 LKVSAKRTNIPGM 191
LKVSAKRTNIPG+
Sbjct: 170 LKVSAKRTNIPGV 182
>gi|254568410|ref|XP_002491315.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238031112|emb|CAY69035.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352168|emb|CCA38567.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 209
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 109/170 (64%), Gaps = 12/170 (7%)
Query: 32 EHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMG-- 89
E D+ + + + N+ + A+ ++L+ K ++ E+E E LRE+Q ++E+G
Sbjct: 3 EETQDNKEQPQQSQLDSNQTESQASQQELDQWKAKMAEMEAEVNKLRELQG--QQEVGSR 60
Query: 90 -------AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 142
A DS + E++E+DS+SIYVGNVD++ TP E+ +HF++CGTVNRVTIL
Sbjct: 61 PENGVGTANSDSDPKFLSIEERQEIDSKSIYVGNVDFSATPGELAEHFKTCGTVNRVTIL 120
Query: 143 TDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
DK G+PKGFAYVEF + +V +L+LN++E HGR LKV KRTN+P
Sbjct: 121 MDKVTGRPKGFAYVEFSDPSSVSESLVLNDSEFHGRNLKVVPKRTNMPSF 170
>gi|357612937|gb|EHJ68241.1| polyadenylate binding protein 2 [Danaus plexippus]
Length = 217
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 95/137 (69%), Gaps = 4/137 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA---EKEEVDSRSIYVG 115
DL +K R++E+EEEA L++M +V+K+M TS EK E D+RS+Y+G
Sbjct: 42 DLAAIKARVREMEEEAEKLKQMHTEVDKQMSLGSPPGLTSPLNMSLEEKIETDNRSVYIG 101
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE++QHF CG++NRVTIL +KF G PKGFAY+EF + D+VQ A+ ++E+
Sbjct: 102 NVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLF 161
Query: 175 HGRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 162 RGRQIKVMPKRTNKPGL 178
>gi|296803623|ref|XP_002842664.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
gi|238846014|gb|EEQ35676.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
Length = 186
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 10/142 (7%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
+N+E + +++ M++RL ++E EA L EMQA ++++ T + +KE++
Sbjct: 14 DNQEKGGDDEEEIAAMRERLTKMESEAAKLHEMQASLDQQ---------TENLREDKEDI 64
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSI+VGNVDYA +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V A
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 124
Query: 167 LLLNETELHGRQLKVSAKRTNI 188
L+LNE+ GR LKV KRTN+
Sbjct: 125 LVLNESLFRGRNLKVVPKRTNL 146
>gi|156399361|ref|XP_001638470.1| predicted protein [Nematostella vectensis]
gi|156225591|gb|EDO46407.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Query: 70 IEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQH 129
+EEEA L+EMQ +VEK + + ++S T EK EVD+RS+YVGNVDY+ T EE++QH
Sbjct: 1 MEEEAEKLKEMQKQVEKSIMS-PPAASGPKTFEEKAEVDARSVYVGNVDYSATAEELEQH 59
Query: 130 FQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNI 188
F CG+VNRVTIL DKF G PKGFAYVEF + D+V NA+LL+++ GRQ+KV KRTN
Sbjct: 60 FHGCGSVNRVTILCDKFSGHPKGFAYVEFSDKDSVDNAVLLSDSLFKGRQIKVVLKRTNR 119
Query: 189 PGM 191
PG+
Sbjct: 120 PGV 122
>gi|156059388|ref|XP_001595617.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980]
gi|154701493|gb|EDO01232.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 182
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 96/131 (73%), Gaps = 10/131 (7%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSR 110
ED N + +++ MK+R+ E+EEEA LREMQA ++++ ++ + +KE++DSR
Sbjct: 16 EDDNNDEEEISAMKRRVAEMEEEAAKLREMQATLDQQ---------STDLREDKEDIDSR 66
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SI+VGNVDY+ +PE++Q HFQSCG++NRVTIL DKF G PKG+AYVEFVE V AL+L
Sbjct: 67 SIFVGNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQALVL 126
Query: 170 NETELHGRQLK 180
NE+ GR LK
Sbjct: 127 NESVFKGRNLK 137
>gi|327302280|ref|XP_003235832.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
gi|326461174|gb|EGD86627.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
Length = 186
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 99/142 (69%), Gaps = 10/142 (7%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
+N+E + +++ M++RL ++E EA L EMQA ++++ T + +KE++
Sbjct: 14 DNQEKAGDDEEEIAAMRERLTKMESEAAKLHEMQASLDQQ---------TENLREDKEDI 64
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSI+VGNVDYA +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V A
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 124
Query: 167 LLLNETELHGRQLKVSAKRTNI 188
L+LNE+ GR +KV KRTN+
Sbjct: 125 LVLNESLFRGRNIKVVPKRTNL 146
>gi|315039445|ref|XP_003169098.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
gi|311337519|gb|EFQ96721.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
Length = 186
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 99/142 (69%), Gaps = 10/142 (7%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
+N+E + +++ M++RL ++E EA L EMQA ++++ T + +KE++
Sbjct: 14 DNQEKAGDDEEEIAAMRERLTKMESEAAKLHEMQASLDQQ---------TENLREDKEDI 64
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSI+VGNVDYA +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V A
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 124
Query: 167 LLLNETELHGRQLKVSAKRTNI 188
L+LNE+ GR +KV KRTN+
Sbjct: 125 LVLNESLFRGRNIKVVPKRTNL 146
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTS--ATQAEKEEVDSRSIYVGN 116
++E+++ RLKE+E+EA +R + +VEK+M V + S T T EK E DSRS++VGN
Sbjct: 11 EIEEIRARLKEMEKEAQLIRNLHTEVEKQMSTVLNESPTPPPLTSDEKVEADSRSVFVGN 70
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY EE++ HF CG +NR+TIL D++ G+PKGFAY+EF + ++ + +L + +T
Sbjct: 71 VDYGAAAEELEAHFHGCGAINRITILCDRYSGRPKGFAYIEFADKESARASLAMTDTLFR 130
Query: 176 GRQLKVSAKRTNIPGM----KQFRGRRPNTFGFRGRR 208
GRQ+KV KRTN PGM ++ RGR + + RR
Sbjct: 131 GRQIKVVEKRTNRPGMGFNRRRMRGRVAYRYLYSNRR 167
>gi|281209044|gb|EFA83219.1| polyadenylate-binding protein 2 [Polysphondylium pallidum PN500]
Length = 202
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 104/157 (66%), Gaps = 16/157 (10%)
Query: 38 DHEHEHDADNENEEDPNANSK---DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDS 94
D E+ +NE+E N + +LE+MK+R KE+EEE L E+Q V+
Sbjct: 21 DQIEENGVENESEATTNTDEAIDPELEEMKRRYKEMEEETKKLNELQNSVD--------- 71
Query: 95 SSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFA 153
S ++EE+D+RS+YVGNV+Y T E++ +FQSCGTVNR+TIL DK G PKG
Sbjct: 72 ---SNGFGDQEEIDARSVYVGNVEYTSTQEDILAYFQSCGTVNRITILNDKTTGHPKGCC 128
Query: 154 YVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPG 190
YVEFV+ ++VQNAL+LN+T + RQ+KV+AKRTN+P
Sbjct: 129 YVEFVDRESVQNALVLNDTTFNNRQIKVTAKRTNLPA 165
>gi|226482504|emb|CAX73851.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 17/187 (9%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSK-----DLEDMKKRLKEIEEEAGALREMQAKVEKEM 88
D DHD + D +ED + + +LE +K+R KEIE +A L +++ ++K
Sbjct: 7 DGDHDVHGDEFGDENGKEDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKS- 65
Query: 89 GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
+ S++++ + +K EVD RS+YVGNVDY T +E++ HF+ CG +NRVTIL +KF G
Sbjct: 66 -PISKSNNSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTG 124
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ------FRGR---R 198
PKGFAY+EF DAV+ A+ L+++ RQLKV KR N+PGM RGR R
Sbjct: 125 HPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRINVPGMSMTNRPPFVRGRARGR 184
Query: 199 PNTFGFR 205
+FGFR
Sbjct: 185 GVSFGFR 191
>gi|226470148|emb|CAX70355.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 17/187 (9%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSK-----DLEDMKKRLKEIEEEAGALREMQAKVEKEM 88
D DHD + D +ED + + +LE +K+R KEIE +A L +++ ++K
Sbjct: 7 DGDHDVHGDEFGDENGKEDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKS- 65
Query: 89 GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
+ S++++ + +K EVD RS+YVGNVDY T +E++ HF+ CG +NRVTIL +KF G
Sbjct: 66 -PISKSNNSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTG 124
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ------FRGR---R 198
PKGFAY+EF DA + A+ L+++ RQLKV KRTN+PGM RGR R
Sbjct: 125 HPKGFAYIEFDTRDAFEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRPPFVRGRARGR 184
Query: 199 PNTFGFR 205
+FGFR
Sbjct: 185 GVSFGFR 191
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 100/135 (74%), Gaps = 7/135 (5%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
++L +K +++E+++EA ALREMQ ++MG + + A ++++D+RS+Y+GN+
Sbjct: 78 QELAILKAKMEEMKQEANALREMQ----EQMG--NNGTHPHLDLAARQDIDNRSVYIGNL 131
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DYA TP+E+Q+HF+SCG++NR+TI T+KF G PKGFAY+EF + V AL LN++ G
Sbjct: 132 DYAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYIEFSDASYVPQALSLNDSLFKG 191
Query: 177 RQLKVSAKRTNIPGM 191
R LK+SAKRTN+PG
Sbjct: 192 RNLKISAKRTNVPGF 206
>gi|256071828|ref|XP_002572240.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043837|emb|CCD81383.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 214
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 17/187 (9%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSK-----DLEDMKKRLKEIEEEAGALREMQAKVEKEM 88
D DHD + D +ED + + +LE +K+R KEIE +A L +++ ++K
Sbjct: 7 DGDHDVHEDEFGDENGKEDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKS- 65
Query: 89 GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
+ S++++ + +K EVD RS+YVGNVDY T +E++ HF+ CG +NRVTIL +KF G
Sbjct: 66 -PISKSNNSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTG 124
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ------FRGR---R 198
PKGFAY+EF DAV+ A+ L+++ RQLKV KRTN+PGM RGR R
Sbjct: 125 HPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRPPFVRGRARGR 184
Query: 199 PNTFGFR 205
+ GFR
Sbjct: 185 GMSIGFR 191
>gi|323454513|gb|EGB10383.1| hypothetical protein AURANDRAFT_23087 [Aureococcus anophagefferens]
Length = 187
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 97/134 (72%), Gaps = 12/134 (8%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKE-EVDSRSIYVGNV 117
+LE+MK+R++E+E+EA L+ MQ +++ E GA +A+KE + D RSIYVG V
Sbjct: 33 ELEEMKRRVQEMEDEAAKLKAMQQELQVETGA----------EAKKENDTDERSIYVGQV 82
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY TPEE+Q HF +CGT+NRVTIL DKF G+ KG+AYVEF E +V A+LL+ + G
Sbjct: 83 DYDATPEELQAHFAACGTINRVTILCDKFTGRSKGYAYVEFEEPASVPTAVLLDNSIFKG 142
Query: 177 RQLKVSAKRTNIPG 190
RQLKV AKRTN+PG
Sbjct: 143 RQLKVVAKRTNVPG 156
>gi|241957093|ref|XP_002421266.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223644610|emb|CAX40598.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 187
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 97/138 (70%), Gaps = 6/138 (4%)
Query: 61 EDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYA 120
E++K +++++E+EA LRE+ +++ E + T T EK + D+RSIY+GNVDY
Sbjct: 18 EEVKNKMEQMEQEAAKLRELHSQLSAE----STNGITHPTDEEKRDADARSIYIGNVDYG 73
Query: 121 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL-LLNETELHGRQ 178
TP E+QQHF S G VNRVTILT+KF GQ KGFAY+EFV+ DAV A+ L+ + RQ
Sbjct: 74 STPLELQQHFSSAGVVNRVTILTNKFTGQAKGFAYLEFVDTDAVDKAVATLDGSTFRERQ 133
Query: 179 LKVSAKRTNIPGMKQFRG 196
LKVSAKRTNIPG+ RG
Sbjct: 134 LKVSAKRTNIPGISVKRG 151
>gi|448101244|ref|XP_004199515.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359380937|emb|CCE81396.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 213
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 105/152 (69%), Gaps = 11/152 (7%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQ 101
+ A N + ++ NA D +D++ R++E+E+EA LRE+ +K+ E+ +AT
Sbjct: 30 QESAANHSNQEANAPGHD-QDVQMRMEEMEKEAAKLRELNSKLNTEV--------DNATS 80
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
EK+++DSRSIY+GNVDY TP E+QQHF CG VNRVTI +KF G PKG+AY+EF +I
Sbjct: 81 EEKKDIDSRSIYIGNVDYGATPLELQQHFSGCGVVNRVTIPLNKFSGSPKGYAYLEFGDI 140
Query: 161 DAVQNAL-LLNETELHGRQLKVSAKRTNIPGM 191
DAV A+ L+ + R++KVS+KRTN+PG+
Sbjct: 141 DAVNKAIATLDGSTFRDREIKVSSKRTNVPGL 172
>gi|453080432|gb|EMF08483.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 211
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 92/127 (72%), Gaps = 10/127 (7%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MKKR++E+E EA LREMQA ++ + ++++S KE++D+RSI+VGNVDY +
Sbjct: 31 MKKRVEEMEAEAAKLREMQASIDNQSDSLRES---------KEDIDNRSIFVGNVDYGAS 81
Query: 123 PEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
PEE+Q HFQS G++NRVTIL DKF G PKG+AYVEF E V +AL+LNE+ R +KV
Sbjct: 82 PEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFSEPQFVTSALVLNESVFRNRNIKV 141
Query: 182 SAKRTNI 188
KRTN+
Sbjct: 142 VPKRTNL 148
>gi|406603845|emb|CCH44661.1| hypothetical protein BN7_4230 [Wickerhamomyces ciferrii]
Length = 180
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 10/138 (7%)
Query: 53 PNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSI 112
P +L++ + E++++A LRE+ A + K+ S TQ EK ++D+RSI
Sbjct: 22 PTTAGSELDNEASKNGEVDDDAAKLRELHADLAKQ---------ESETQEEKSDIDARSI 72
Query: 113 YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNE 171
YVGNVDY +PEE+Q+HFQS G +NRVTIL +KF GQPKGFAY+EF E +V N+L+LN+
Sbjct: 73 YVGNVDYDSSPEELQKHFQSVGVINRVTILLNKFTGQPKGFAYIEFAEPSSVVNSLVLND 132
Query: 172 TELHGRQLKVSAKRTNIP 189
+ GR LKV+ KRTNIP
Sbjct: 133 SVFRGRNLKVNPKRTNIP 150
>gi|328873645|gb|EGG22012.1| polyadenylate-binding protein 2 [Dictyostelium fasciculatum]
Length = 243
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 14/149 (9%)
Query: 45 ADNENEEDPNA---NSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQ 101
+ +NEED N+ +LE+MK+R KEIEEE L+E+Q +E G D
Sbjct: 41 TNTKNEEDENSELNQDPELEEMKRRYKEIEEETQKLKELQNSLEANGGFGGD-------- 92
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+EE D RS+YVGNV+Y T EE+ HFQ CGT++R+TIL DK G PKG Y+EF+E
Sbjct: 93 --QEETDGRSVYVGNVEYTSTQEEILLHFQPCGTIHRITILNDKMTGHPKGCCYIEFLER 150
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIP 189
+AV NAL+LNET RQ+KV+ KRTN+P
Sbjct: 151 EAVTNALMLNETMFKDRQIKVTPKRTNLP 179
>gi|256071830|ref|XP_002572241.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043836|emb|CCD81382.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 223
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 116/194 (59%), Gaps = 22/194 (11%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSK-----DLEDMKKRLKEIEEEAGALREMQAKVEKE- 87
D DHD + D +ED + + +LE +K+R KEIE +A L +++ ++K
Sbjct: 7 DGDHDVHEDEFGDENGKEDVSVTDEMHFDAELEAIKERFKEIEADANKLHDLRRVIDKSP 66
Query: 88 ------MGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 141
+ + +S++++ + +K EVD RS+YVGNVDY T +E++ HF+ CG +NRVTI
Sbjct: 67 ISTFRNLFSAAESNNSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTI 126
Query: 142 LTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ------F 194
L +KF G PKGFAY+EF DAV+ A+ L+++ RQLKV KRTN+PGM
Sbjct: 127 LCNKFTGHPKGFAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRPPFV 186
Query: 195 RGR---RPNTFGFR 205
RGR R + GFR
Sbjct: 187 RGRARGRGMSIGFR 200
>gi|449550073|gb|EMD41038.1| hypothetical protein CERSUDRAFT_62981 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 93/134 (69%), Gaps = 4/134 (2%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---TQAEKEEVDSRSIYVGN 116
++ MK+R++E+E EA LRE+QA EK + + T T+ +K DSRSI+VGN
Sbjct: 29 IQLMKQRVEEMEREANKLRELQAAAEKAERSGSEPGDTGVPMETEEDKAAADSRSIFVGN 88
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY+ TPEE+Q HFQSCG +NRVTIL DKF G PKG+AYVEF E + V A ++ +
Sbjct: 89 VDYSATPEEIQVHFQSCGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAATAMDNSLFR 148
Query: 176 GRQLKVSAKRTNIP 189
GR +KV+AKRTN+P
Sbjct: 149 GRLIKVTAKRTNVP 162
>gi|388582273|gb|EIM22578.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 202
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 102/167 (61%), Gaps = 20/167 (11%)
Query: 43 HDADNENEEDPNANS----KDLEDMKKRLKEIEEEAGALREMQAKVEKE----------- 87
+D +N E+P K++ MK+R+K++EEEA LRE+Q VE++
Sbjct: 5 NDYNNPTNEEPTFEEDDEDKEIAAMKERVKQMEEEAARLREVQENVEQKPEEDQQQQPQQ 64
Query: 88 ----MGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 143
+ + Q E+VD RS+YVGNVDY+ TPE++Q+HF +CGT+NRVTIL
Sbjct: 65 LESQEQSTFEGQDAEMMQESSEDVDGRSVYVGNVDYSATPEDLQKHFAACGTINRVTILC 124
Query: 144 DKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
DKF G PKG+AY+EF E V+NA LNE+ GR +KV AKR N+P
Sbjct: 125 DKFTGHPKGYAYIEFAEPSLVENASALNESLFKGRLIKVVAKRKNVP 171
>gi|198438310|ref|XP_002131910.1| PREDICTED: similar to Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)-binding protein II)
(PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) [Ciona intestinalis]
Length = 225
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 100/148 (67%), Gaps = 8/148 (5%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA--TQAEKEE 106
+E DP +LE +K R+KE+E EA L+EMQ VEK+M +S+T A T EK E
Sbjct: 43 DETDP-----ELEAIKARVKEMEAEAEKLKEMQNDVEKQMTLSPPASATFAFPTIEEKVE 97
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQN 165
DSRS++VGNVDY T EE++QHF G++NRVTIL D++ G PKGFAYVEF + ++V+
Sbjct: 98 ADSRSVFVGNVDYGATAEELEQHFHGTGSINRVTILCDRYSGHPKGFAYVEFADTESVET 157
Query: 166 ALLLNETELHGRQLKVSAKRTNIPGMKQ 193
A L+ T GRQL+V+ KRTN G+
Sbjct: 158 ATALDGTLFRGRQLQVNPKRTNKHGISS 185
>gi|225558865|gb|EEH07148.1| RNP domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 150
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 93/135 (68%), Gaps = 10/135 (7%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
E E P +++ MK+R+ E+E EA LREMQA ++++ ++++ +KE++
Sbjct: 13 ETHEKPGYEEEEIAAMKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDI 63
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 123
Query: 167 LLLNETELHGRQLKV 181
L+LNE+ GR LK
Sbjct: 124 LVLNESVFRGRNLKA 138
>gi|409080136|gb|EKM80497.1| hypothetical protein AGABI1DRAFT_100088 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 343
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 94/137 (68%), Gaps = 5/137 (3%)
Query: 47 NENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA-TQAEKE 105
N NEED +SK++ MK+R++E+E EA LREMQA EK + S T+ +K
Sbjct: 20 NLNEED---DSKEIMLMKQRVEEMEREAKKLREMQAAAEKAADTSEGGESAPMDTEEDKN 76
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQ 164
+DSRS+YVGNVDY TPEE+Q HFQSCGT+NRVTIL DKF G PKG+AYVEF E + V
Sbjct: 77 LIDSRSVYVGNVDYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEHVD 136
Query: 165 NALLLNETELHGRQLKV 181
AL ++ + GR +KV
Sbjct: 137 AALSMDNSLFRGRLIKV 153
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 113/175 (64%), Gaps = 15/175 (8%)
Query: 25 DVDEHEHEHDHDHDHEHEHDA--DNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQA 82
DVDE E + E+E DA DNE+ ED +LE +K+R+K +E EA L+E+Q+
Sbjct: 3 DVDEVLLE---ESGAENELDASLDNEDAED----DPELEAIKERVKAMEAEAEKLKELQS 55
Query: 83 KVEKEM-----GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVN 137
+VE +M G+ S+ T EK + D+RSIY+G VDY+ T EE++QHF CG +N
Sbjct: 56 EVESQMSMGDAGSASMGSANFPTLEEKVDADNRSIYIGQVDYSSTAEELEQHFHGCGALN 115
Query: 138 RVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
RVTI+ DK+ GQPKGFAY+EF E ++V A+ L+ + RQ+KV KRTN PG+
Sbjct: 116 RVTIICDKYSGQPKGFAYIEFTEKESVDAAIALDGSMFRDRQIKVMPKRTNKPGV 170
>gi|358056102|dbj|GAA97956.1| hypothetical protein E5Q_04636 [Mixia osmundae IAM 14324]
Length = 203
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 100/165 (60%), Gaps = 23/165 (13%)
Query: 45 ADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQ-----------------AKVEKE 87
+++E+E+D N+ M+ RL+E+E E + EM A+ +
Sbjct: 3 SNHEDEDDDGINA-----MRARLQEMEAERAKIMEMTKASHSAAPVAGSPAVAPAQTSQG 57
Query: 88 MGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 147
++ S T+ E+E +DSRSIYVGNVDY TPEE+QQ F+ CGT+NRVTIL DKF
Sbjct: 58 QATEDETGDASMTEEEREAIDSRSIYVGNVDYGATPEELQQLFKDCGTINRVTILCDKFT 117
Query: 148 Q-PKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ PKGFAYVEF E V NA+ +NET GR + V AKRTN+PGM
Sbjct: 118 RHPKGFAYVEFSEPTFVANAISMNETLFRGRMILVKAKRTNVPGM 162
>gi|443723317|gb|ELU11799.1| hypothetical protein CAPTEDRAFT_18178 [Capitella teleta]
Length = 157
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 97/141 (68%), Gaps = 8/141 (5%)
Query: 70 IEEEAGALREMQAKVEKEMGAVQDSSSTSATQA----EKEEVDSRSIYVGNVDYACTPEE 125
+EEEA LREMQ++VEK++ + SS S T A +K + DSRSI++GNVDYA T EE
Sbjct: 1 MEEEAEKLREMQSEVEKQL-ILNSSSMGSPTPAISLEDKLDADSRSIWIGNVDYAATAEE 59
Query: 126 VQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
+ HF CG+VNR TIL DKF G PKGFAYVEFV+ D+V+ A L+++ GRQ+KV+ K
Sbjct: 60 LGSHFHGCGSVNRATILCDKFSGHPKGFAYVEFVDKDSVETAQALDDSLFKGRQIKVTPK 119
Query: 185 RTNIPGMKQFRGRRPNTFGFR 205
RTN PG+ RP + FR
Sbjct: 120 RTNRPGISST--NRPPSGRFR 138
>gi|294926226|ref|XP_002779060.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887927|gb|EER10855.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 242
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 110/180 (61%), Gaps = 19/180 (10%)
Query: 24 IDVDEHEHEHDHDHDHEHE-HDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQA 82
IDVD H + E+E HD D E+ + ++ +M+ +++E+E+EA LR+M
Sbjct: 24 IDVDGPPHPVGGEEVGENEQHDVD-EDLDLGVDGDDEIMEMQHKIQELEDEAERLRQM-- 80
Query: 83 KVEKEMGAVQDSSSTSATQAEKEEV-----------DSRSIYVGNVDYACTPEEVQQHFQ 131
E GA + +T++ E D RSIYVGNVDY PEE+Q+HF+
Sbjct: 81 ---TEQGATGNGDATASDHESVEMTPEQQAAQSQEQDRRSIYVGNVDYGSAPEELQEHFK 137
Query: 132 SCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPG 190
SCG++ R+TI+ DK+ G PKGFAY+EF + AVQNALLLN+T GRQLKV KRTN+PG
Sbjct: 138 SCGSIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 197
>gi|393215597|gb|EJD01088.1| polyadenylate-binding protein 2 [Fomitiporia mediterranea MF3/22]
Length = 201
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 90/133 (67%), Gaps = 6/133 (4%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA-----TQAEKEEVDSRSIYVGNV 117
MK RL+EIE+EA ALR+M+ EKE A+ ++ S T + D RS+YVGNV
Sbjct: 31 MKSRLEEIEKEAEALRQMREAQEKEAKAIAAVAAPSEGDEMETDEDPHAADERSVYVGNV 90
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY +PEE+Q HFQ+CGT+NRVTIL DKF G PKG+AYVEF E V+ A LNE+ G
Sbjct: 91 DYGASPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSFVETAQTLNESLFKG 150
Query: 177 RQLKVSAKRTNIP 189
R +KV KRTNIP
Sbjct: 151 RLIKVVPKRTNIP 163
>gi|336386223|gb|EGO27369.1| hypothetical protein SERLADRAFT_446592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 338
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 96/148 (64%), Gaps = 6/148 (4%)
Query: 55 ANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRS 111
A SK+++ MK+R++E+E EA LRE+QA E G DS T+ EK DSRS
Sbjct: 25 AESKEIQLMKQRVEEMEREAKKLRELQAAAETANGGTSTESDSGVPMETEEEKALSDSRS 84
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLN 170
++VGNVDY TPEE+Q HFQ+CGT+NRVTIL DKF G PKG+AYVEF E D + AL ++
Sbjct: 85 VFVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPDFIDAALAMD 144
Query: 171 ETELHGRQLKVSA--KRTNIPGMKQFRG 196
+ GR +K S+ +R ++ K R
Sbjct: 145 NSLFRGRLIKTSSTPRRMSLSMFKICRA 172
>gi|58263254|ref|XP_569037.1| poly(A) binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107872|ref|XP_777318.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260008|gb|EAL22671.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223687|gb|AAW41730.1| poly(A) binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 210
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 93/156 (59%), Gaps = 14/156 (8%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA------ 102
NE++ N + ++L M+ RL E+E E AL + + S +
Sbjct: 21 NEDESNVD-EELALMQARLAEMEAEKNALAASTSASGNGTPVSHNVSGGETNETHEGDGN 79
Query: 103 ------EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYV 155
E VD RS+++GNVDY TPEE+Q HFQ+CGT+NRVTIL DKF G PKG+AYV
Sbjct: 80 MEEDGESSEAVDMRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYV 139
Query: 156 EFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
EF E VQNAL+LNE+ GR L+V KRTN+PGM
Sbjct: 140 EFAEPSIVQNALVLNESMFRGRMLQVKEKRTNVPGM 175
>gi|392576908|gb|EIW70038.1| hypothetical protein TREMEDRAFT_43661 [Tremella mesenterica DSM
1558]
Length = 186
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 89/137 (64%), Gaps = 4/137 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAK---VEKEMGAVQDSSSTSATQAEKEEVDSRSIYVG 115
+L M+ RL ++E E A+ +K K G + ++ + VD+RS+Y+G
Sbjct: 23 ELSLMQARLAQMEAEKNAIAAGGSKPSPAPKIQGEEGEGDASMEDEDAPAAVDARSVYIG 82
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY TPEE+Q HFQ+CGT+NRVTIL DKF G PKG+AYVEF E VQNAL+LN++
Sbjct: 83 NVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIVQNALVLNDSMF 142
Query: 175 HGRQLKVSAKRTNIPGM 191
GR L V KRTNIPGM
Sbjct: 143 RGRLLSVREKRTNIPGM 159
>gi|344299871|gb|EGW30224.1| hypothetical protein SPAPADRAFT_144523 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 113/180 (62%), Gaps = 11/180 (6%)
Query: 20 MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDL------EDMKKRLKEIEEE 73
M ++ + + +H DH + ++E++ P+AN + E ++R++E+E E
Sbjct: 1 MSDEVPISQQQHYPDHQQEQPAYEHGNSEDQTSPDANVSLIIHPEQDESNRERIEEMERE 60
Query: 74 AGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSC 133
A LRE+ +++ + S T T EK +VD+RSIY+GNVDY TP E+QQHF SC
Sbjct: 61 AAKLRELHSQLSNDTAM---SGITPQTDEEKRDVDARSIYIGNVDYGSTPLELQQHFSSC 117
Query: 134 GTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKVSAKRTNIPGM 191
G VNRVTIL +K GQPKGFAY+EF ++D V A+ L+ + RQLKVSAKRTNIPG+
Sbjct: 118 GIVNRVTILMNKHTGQPKGFAYLEFADVDGVNKAVATLDGSMFRDRQLKVSAKRTNIPGI 177
>gi|336373392|gb|EGO01730.1| hypothetical protein SERLA73DRAFT_70899 [Serpula lacrymans var.
lacrymans S7.3]
Length = 346
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 4/131 (3%)
Query: 55 ANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRS 111
A SK+++ MK+R++E+E EA LRE+QA E G DS T+ EK DSRS
Sbjct: 25 AESKEIQLMKQRVEEMEREAKKLRELQAAAETANGGTSTESDSGVPMETEEEKALSDSRS 84
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLN 170
++VGNVDY TPEE+Q HFQ+CGT+NRVTIL DKF G PKG+AYVEF E D + AL ++
Sbjct: 85 VFVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPDFIDAALAMD 144
Query: 171 ETELHGRQLKV 181
+ GR +KV
Sbjct: 145 NSLFRGRLIKV 155
>gi|443713406|gb|ELU06276.1| hypothetical protein CAPTEDRAFT_174932 [Capitella teleta]
Length = 184
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 100/143 (69%), Gaps = 11/143 (7%)
Query: 44 DADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA- 102
+ D ++ +DP +LE +K R+KE+EEEA L+EMQ++VEK+M + SS S T A
Sbjct: 47 NGDADSVDDP-----ELEAIKARVKEMEEEAEKLKEMQSEVEKQMN-LSSSSMGSPTPAV 100
Query: 103 ---EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
+K + D+RSI+VGNVDY T EE++ HF CG VNRVTIL DKF G PKGFAYVEFV
Sbjct: 101 SLEDKLDADNRSIWVGNVDYTATAEELEAHFHGCGCVNRVTILCDKFSGHPKGFAYVEFV 160
Query: 159 EIDAVQNALLLNETELHGRQLKV 181
+ D+VQ A L+++ GRQ+KV
Sbjct: 161 DKDSVQTAQALDDSLFKGRQIKV 183
>gi|126140476|ref|XP_001386760.1| hypothetical protein PICST_50467 [Scheffersomyces stipitis CBS
6054]
gi|126094044|gb|ABN68731.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 217
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 91/128 (71%), Gaps = 5/128 (3%)
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RLKE+E EA LRE+ ++++++ + T EK ++DSRS+Y+GNVDY TP E
Sbjct: 48 RLKEMEREADRLRELHSQLDEQQ---KGGDGIPQTDEEKRDIDSRSVYIGNVDYGSTPLE 104
Query: 126 VQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKVSA 183
+QQHF S G V RVTILT+KF GQPKGFAY+EF ++D V A+ L+ T R+LKVSA
Sbjct: 105 LQQHFSSAGIVKRVTILTNKFTGQPKGFAYLEFDDVDGVNKAVATLDGTVFRDRELKVSA 164
Query: 184 KRTNIPGM 191
KRTNIPG+
Sbjct: 165 KRTNIPGL 172
>gi|405118694|gb|AFR93468.1| poly(A) binding protein [Cryptococcus neoformans var. grubii H99]
Length = 201
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 93/156 (59%), Gaps = 14/156 (8%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA------ 102
NE++ N + ++L M+ RL E+E E AL + + S +
Sbjct: 12 NEDESNVD-EELALMQARLAEMEAEKNALAASTSASGNGTPVPPNVSGGETNETHEGDGN 70
Query: 103 ------EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYV 155
E VD RS+++GNVDY TPEE+Q HFQ+CGT+NRVTIL DKF G PKG+AYV
Sbjct: 71 MEEDGESSEAVDMRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYV 130
Query: 156 EFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
EF E VQNAL+LNE+ GR L+V KRTN+PGM
Sbjct: 131 EFAEPSIVQNALVLNESMFKGRMLQVKEKRTNVPGM 166
>gi|443895148|dbj|GAC72494.1| splicing factor RNPS1, partial [Pseudozyma antarctica T-34]
Length = 160
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 85/120 (70%), Gaps = 6/120 (5%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++E MK+R+ E+E EA LRE+Q + + ++ E+EEVDSRSIYVGNVD
Sbjct: 46 EIEAMKQRVAEMEAEAAKLRELQ-----QAAGEAGGAGLHPSEEEREEVDSRSIYVGNVD 100
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y TPEE+QQHFQSCGT+NRVTIL DKF G PKG+AYVEF + V NA++LNE+ GR
Sbjct: 101 YGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANAMVLNESLFRGR 160
>gi|412993021|emb|CCO16554.1| predicted protein [Bathycoccus prasinos]
Length = 221
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 97/153 (63%), Gaps = 23/153 (15%)
Query: 63 MKKRLKEIEEEAGALREMQAKVE-----KEMGAVQDSSSTSATQ---------------A 102
MK++L E+E EA +LRE + ++ +EM S + Q A
Sbjct: 11 MKEKLAEMEREASSLREQEQGIDGKALDEEMAKHHHSDNNGQGQGGKPQKTPEELEKEKA 70
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDA 162
E++E+DSRS++VG VDY P + +HF+ CGTVNRVTILTDKF PKGFAYVEF+E DA
Sbjct: 71 ERQEIDSRSVFVGQVDYGAEPGMLAEHFKKCGTVNRVTILTDKFENPKGFAYVEFLEKDA 130
Query: 163 VQNALLLNET---ELHGRQLKVSAKRTNIPGMK 192
V A+LL+ T E R+LKVSAKRTN+PGMK
Sbjct: 131 VDAAVLLDGTGLEEFPQRKLKVSAKRTNVPGMK 163
>gi|361128100|gb|EHL00053.1| putative E3 ubiquitin-protein ligase hulA [Glarea lozoyensis 74030]
Length = 1411
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 87/125 (69%), Gaps = 10/125 (8%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDY 119
+ MK+R+ E+EEEA LREMQA +E++ + D +KE++DSRSI+VGNVDY
Sbjct: 649 ISAMKRRVAEMEEEAAKLREMQATMEQQHQDLDD---------KKEDIDSRSIFVGNVDY 699
Query: 120 ACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
+PEE+Q HF +CG +NRVTIL DKF G PKG+AYVEF E + V AL+LNE+ GR
Sbjct: 700 EASPEEIQAHFTTCGPINRVTILLDKFTGHPKGYAYVEFTEPNLVAQALVLNESVFRGRN 759
Query: 179 LKVSA 183
LK A
Sbjct: 760 LKAVA 764
>gi|358340157|dbj|GAA28424.2| polyadenylate-binding protein 2 [Clonorchis sinensis]
Length = 288
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 106/166 (63%), Gaps = 10/166 (6%)
Query: 36 DHDHEHEHD--ADNENEEDPNANS-----KDLEDMKKRLKEIEEEAGALREMQAKVEKEM 88
D DHE + D D ++ED + + +LE +K+R KEIE +A L +++ +K
Sbjct: 7 DGDHEDQGDDFGDEASKEDISVSDDIQFDAELEAIKERFKEIEADANKLHDLRHLTDK-- 64
Query: 89 GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
V +S + + +K EVD RS+YVGNVDY T +E++ HF++CG +NRVTIL +K+ G
Sbjct: 65 SPVSKTSLSVLSDEDKAEVDLRSVYVGNVDYGATADELEAHFRACGPINRVTILCNKYTG 124
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
QPKGFAY+EF DAV+ A+ L+E+ R LKV KRTN+PGM
Sbjct: 125 QPKGFAYIEFDTRDAVEAAMALDESNFRNRALKVLPKRTNVPGMSM 170
>gi|118096584|ref|XP_001232211.1| PREDICTED: polyadenylate-binding protein 2 [Gallus gallus]
Length = 249
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 103/175 (58%), Gaps = 7/175 (4%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD 93
D DH H E + +DP +LE +K R++E+EEE L+E+Q + E + +
Sbjct: 46 DSDHSHPEEDSVEELGVQDP-----ELEAIKARVREMEEEDKRLKELQLEAESCLLMGSE 100
Query: 94 SSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF 152
+ K E D RSIYVGNVDY T EE++ HF CG +NRVTIL DKF G PKG+
Sbjct: 101 AGLFQRMTEGKVEADQRSIYVGNVDYGGTAEELESHFNICGRINRVTILCDKFSGHPKGY 160
Query: 153 AYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRG 206
AY+EF + +V+ A+ L+E+ GR +KV KRTN+PG+ RG R F RG
Sbjct: 161 AYIEFEQKSSVKAAVELDESIFRGRVIKVLPKRTNMPGISSTDRGGRRGHFQARG 215
>gi|268564716|ref|XP_002639198.1| C. briggsae CBR-PABP-2 protein [Caenorhabditis briggsae]
Length = 205
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 96/153 (62%), Gaps = 5/153 (3%)
Query: 44 DADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---- 99
D D N +D + DL ++ L EIEEE L+ +Q ++ M S S S
Sbjct: 8 DEDVLNIDDITEDDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSLL 67
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
T EK E D++S+YVGNVDY T EE++QHF CG+V RVTIL DKF G PKGFAYVEF
Sbjct: 68 TPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFT 127
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
E D +QNAL + ++ L GRQ+KV KRTN PG+
Sbjct: 128 EKDGMQNALAMTDSLLRGRQIKVDPKRTNRPGL 160
>gi|308494172|ref|XP_003109275.1| CRE-PABP-2 protein [Caenorhabditis remanei]
gi|308246688|gb|EFO90640.1| CRE-PABP-2 protein [Caenorhabditis remanei]
Length = 205
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 96/153 (62%), Gaps = 5/153 (3%)
Query: 44 DADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---- 99
D D N +D + DL ++ L EIEEE L+ +Q ++ M S S S
Sbjct: 8 DDDVLNIDDITEDDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSLL 67
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
T EK E D++S+YVGNVDY T EE++QHF CG+V RVTIL DKF G PKGFAYVEF
Sbjct: 68 TPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFT 127
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
E D +QNAL + ++ L GRQ+KV KRTN PG+
Sbjct: 128 EKDGMQNALAMTDSLLRGRQIKVDPKRTNRPGL 160
>gi|321248626|ref|XP_003191185.1| poly(A) binding protein [Cryptococcus gattii WM276]
gi|317457652|gb|ADV19398.1| Poly(A) binding protein, putative [Cryptococcus gattii WM276]
Length = 217
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDA 162
E VD RS+++GNVDY TPEE+Q HFQ+CGT+NRVTIL DKF G PKG+AYVEF E
Sbjct: 94 SEAVDMRSVFIGNVDYGATPEEIQGHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSI 153
Query: 163 VQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
VQNAL+LNE+ GR L+V KRTN+PGM
Sbjct: 154 VQNALVLNESMFRGRMLQVKEKRTNVPGMNM 184
>gi|294933484|ref|XP_002780736.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239890777|gb|EER12531.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 226
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 92/142 (64%), Gaps = 16/142 (11%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTS----------ATQAEKEEVDS 109
+ +M+ +++E+E+EA LR+M E GA D S A+ E D
Sbjct: 46 IMEMQHKIQELEDEAERLRQM-----TEQGATGDGDGVSDHENVEMTAEQQAAQSPEQDK 100
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL 168
RS+YVG+VDY PEE+Q+HF+SCG + R+TI+ DK+ G PKGFAY+EF + AVQNALL
Sbjct: 101 RSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNALL 160
Query: 169 LNETELHGRQLKVSAKRTNIPG 190
LN+T GRQLKV KRTN+PG
Sbjct: 161 LNDTMFRGRQLKVLQKRTNLPG 182
>gi|341895192|gb|EGT51127.1| hypothetical protein CAEBREN_00953 [Caenorhabditis brenneri]
Length = 205
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 94/148 (63%), Gaps = 5/148 (3%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA----TQAEK 104
N +D + DL ++ L EIEEE L+ +Q ++ M S S S T EK
Sbjct: 13 NIDDITEDDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSLLTPEEK 72
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAV 163
E D++S+YVGNVDY T EE++QHF CG+V RVTIL DKF G PKGFAYVEF E D +
Sbjct: 73 AEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDGM 132
Query: 164 QNALLLNETELHGRQLKVSAKRTNIPGM 191
QNAL + ++ L GRQ+KV KRTN PG+
Sbjct: 133 QNALAMTDSLLRGRQIKVDQKRTNRPGL 160
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGA-VQDSSSTSATQAEKEEVDSRSIYVGNVDYAC 121
+K+R+K +EEEA L+ +Q++VE+++ A V T EK E D+RSIYVG V+YA
Sbjct: 42 IKQRVKAMEEEAEKLKALQSEVEQQITADVTSPKINFPTMEEKMETDNRSIYVGQVEYAT 101
Query: 122 TPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
T EE++QHF CG +NRVTI+ DKF G PKGFAY+EF E ++V +L L+ + L GRQ+K
Sbjct: 102 TAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIEFTEKESVDASLALDGSILCGRQIK 161
Query: 181 VSAKRTNIPGM 191
V KRTN PG+
Sbjct: 162 VMPKRTNRPGV 172
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGA-VQDSSSTSATQAEKEEVDSRSIYVGNVDYAC 121
+K+R+K +EEEA L+ +Q++VE+++ A V T EK E D+RSIYVG V+YA
Sbjct: 42 IKQRVKAMEEEAEKLKALQSEVEQQITADVTSPKINFPTMEEKMETDNRSIYVGQVEYAT 101
Query: 122 TPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
T EE++QHF CG +NRVTI+ DKF G PKGFAY+EF E ++V +L L+ + L GRQ+K
Sbjct: 102 TAEELEQHFHGCGALNRVTIICDKFSGHPKGFAYIEFTEKESVDASLALDGSILCGRQIK 161
Query: 181 VSAKRTNIPGM 191
V KRTN PG+
Sbjct: 162 VMPKRTNRPGV 172
>gi|66818257|ref|XP_642788.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
gi|74997256|sp|Q54ZS8.1|PABP2_DICDI RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|60470900|gb|EAL68872.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
Length = 222
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 95/147 (64%), Gaps = 13/147 (8%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTS-------ATQAE 103
EDP +LE+MKKR +E+EEEA L E+Q +E + +
Sbjct: 40 EDP-----ELEEMKKRFREMEEEAKKLTELQNNLESNITGNNGVGIGGNIGGGGGLMNTD 94
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDA 162
+EE+DSRS+YVGNVDY T +++ +FQSCGTVNR+TIL+DK G PKG YVEFV ++
Sbjct: 95 QEEIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVNKES 154
Query: 163 VQNALLLNETELHGRQLKVSAKRTNIP 189
+ NA+ LN++ + RQLK++ KRTN+P
Sbjct: 155 IINAMALNDSFFNERQLKITPKRTNLP 181
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 97/153 (63%), Gaps = 5/153 (3%)
Query: 44 DADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA---- 99
D D N ED + DL ++ L EIEEE L+ +Q ++ M S S S+
Sbjct: 8 DDDVLNIEDMTGDDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSSQSLL 67
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
T EK E D++S+YVGNVDY T EE++QHF CG+V+RVTI D+F G PKGFAYVEF
Sbjct: 68 TPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFT 127
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
E + +QNAL + ++ L GRQ+KV KRTN PGM
Sbjct: 128 EKEGMQNALAMTDSLLRGRQIKVDPKRTNKPGM 160
>gi|378729234|gb|EHY55693.1| apoptosis regulator BCL-W [Exophiala dermatitidis NIH/UT8656]
Length = 206
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 90/128 (70%), Gaps = 10/128 (7%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MK+R+ E+E EA LREMQ+++E++ S + ++E+VD+RSI+VGNVDY T
Sbjct: 28 MKRRVAEMESEAAKLREMQSQLEQQ--------SEGGRREDREDVDARSIFVGNVDYGAT 79
Query: 123 PEEVQQHFQSC-GTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
PEE+Q HF S G++NRVTIL DKF G PKG+AYVEF + V AL+LNE+ GR LK
Sbjct: 80 PEEIQAHFASGPGSINRVTILLDKFTGHPKGYAYVEFSDPALVAQALVLNESVFRGRNLK 139
Query: 181 VSAKRTNI 188
V KRTN+
Sbjct: 140 VVPKRTNL 147
>gi|341904125|gb|EGT59958.1| hypothetical protein CAEBREN_16301 [Caenorhabditis brenneri]
Length = 336
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 10/159 (6%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMG----AVQDSSSTSATQAEK 104
N +D ++ DL ++ L EIEEE L+ +Q ++ M + DS+ + T EK
Sbjct: 13 NIDDITEDNADLSAIEGDLNEIEEEQEKLKAIQNEMVGHMNLNTSSQSDSTQSLLTPEEK 72
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAV 163
E D++S+YVGNVDY T EE++QHF CG+V RVTIL DKF + PKGFAYVEF E D +
Sbjct: 73 AEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSRHPKGFAYVEFTEKDGM 132
Query: 164 QNALLLNETELHGRQLKVSAKRTNIPGMKQ-----FRGR 197
QNAL + ++ L GRQ+KV KR N PG+ FRGR
Sbjct: 133 QNALAMTDSLLRGRQIKVDQKRANRPGLSTTNRPPFRGR 171
>gi|341898366|gb|EGT54301.1| hypothetical protein CAEBREN_10290 [Caenorhabditis brenneri]
Length = 223
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 91/139 (65%), Gaps = 5/139 (3%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTS----ATQAEKEEVDSRSIY 113
+DL ++ L EIEEE L+ +Q ++ M S S S T EK E D++S+Y
Sbjct: 40 QDLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSTQSLLTPEEKAEADAKSVY 99
Query: 114 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNET 172
VGNVDY T EE++QHF CG+V RVTIL DKF G PKGFAYVEF E D +QNAL + ++
Sbjct: 100 VGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDGMQNALAMTDS 159
Query: 173 ELHGRQLKVSAKRTNIPGM 191
L GRQ+KV KRTN PG+
Sbjct: 160 LLRGRQIKVDQKRTNRPGL 178
>gi|50420005|ref|XP_458535.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
gi|49654202|emb|CAG86667.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
Length = 218
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 91/131 (69%), Gaps = 9/131 (6%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
+ R++E+E+EA LRE+ +++ + S+ ++ E+ ++DSRS+Y+GNVDY T
Sbjct: 49 VNSRMEEMEKEAAKLRELHSQLSND-------SNNDPSEEERRDIDSRSVYIGNVDYGST 101
Query: 123 PEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLK 180
P E+QQHF S G VNRVTI +KF GQPKGFAY+EF +ID V A+ L+ + R+LK
Sbjct: 102 PLELQQHFSSGGVVNRVTIPLNKFTGQPKGFAYLEFADIDGVNKAVATLDGSTFRDRELK 161
Query: 181 VSAKRTNIPGM 191
V AKRTN+PGM
Sbjct: 162 VCAKRTNVPGM 172
>gi|426198097|gb|EKV48023.1| hypothetical protein AGABI2DRAFT_68353, partial [Agaricus bisporus
var. bisporus H97]
Length = 332
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 84/121 (69%), Gaps = 2/121 (1%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA-TQAEKEEVDSRSIYVGNVDYAC 121
MK+R++E+E EA LREMQA EK + S T+ +K +DSRS+YVGNVDY
Sbjct: 5 MKQRVEEMEREAKKLREMQAAAEKAADTSEGGESAPMDTEEDKNLIDSRSVYVGNVDYGA 64
Query: 122 TPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
TPEE+Q HFQSCGT+NRVTIL DKF G PKG+AYVEF E + V AL ++ + GR +K
Sbjct: 65 TPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEHVDAALSMDNSLFRGRLIK 124
Query: 181 V 181
V
Sbjct: 125 V 125
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 120/207 (57%), Gaps = 17/207 (8%)
Query: 12 YGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIE 71
+G + +E D D E E D E D EDP +LE +K R++E+E
Sbjct: 4 FGNGLAEESLLDSDPGHSELEDPGVGDEEPGLDEGEAAIEDP-----ELEAIKARVREME 58
Query: 72 EEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHF 130
EEA L+E+Q +VEK+M + + + EK E D RSIYVGNVDY T EE++ HF
Sbjct: 59 EEAEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKIEADGRSIYVGNVDYGATAEELEAHF 118
Query: 131 QSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
CG+VNRVTIL DKF G PKGFAY+EF + ++V+ A+ L+E+ GRQ+KV AKRTN P
Sbjct: 119 HGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAMALDESLFRGRQIKVGAKRTNRP 178
Query: 190 GMK---------QFRGRRPNTFGFRGR 207
G+ +FR R N F R R
Sbjct: 179 GISTTDRGFPRARFRSRGGN-FSSRAR 204
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 120/207 (57%), Gaps = 17/207 (8%)
Query: 12 YGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIE 71
+G + +E D D E E D E D EDP +LE +K R++E+E
Sbjct: 4 FGNGLAEESLLDSDPGHSELEDPGVGDEEPGLDEGEAAIEDP-----ELEAIKARVREME 58
Query: 72 EEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHF 130
EEA L+E+Q +VEK+M + + + EK E D RSIYVGNVDY T EE++ HF
Sbjct: 59 EEAEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKIEADGRSIYVGNVDYGATAEELEAHF 118
Query: 131 QSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
CG+VNRVTIL DKF G PKGFAY+EF + ++V+ A+ L+E+ GRQ+KV AKRTN P
Sbjct: 119 HGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAMALDESLFRGRQIKVGAKRTNRP 178
Query: 190 GMK---------QFRGRRPNTFGFRGR 207
G+ +FR R N F R R
Sbjct: 179 GISTTDRGFPRARFRSRGGN-FSSRAR 204
>gi|294878913|ref|XP_002768513.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871063|gb|EER01231.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 196
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 93/143 (65%), Gaps = 16/143 (11%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTS----------ATQAEKEEVD 108
D+ +M+ +++E+E+EA LR+M E G D S A+ +E D
Sbjct: 43 DIMEMQHKIQELEDEAERLRQM-----TEQGGTGDGDGVSDHENAEMTAEQQAAQSQEQD 97
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
RS+YVG+VDY PEE+Q+HF+SCG + R+TI+ DK+ G PKGFAY+EF + AVQNAL
Sbjct: 98 KRSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNAL 157
Query: 168 LLNETELHGRQLKVSAKRTNIPG 190
LLN+T GRQLKV KRTN+PG
Sbjct: 158 LLNDTMFRGRQLKVLQKRTNLPG 180
>gi|389747069|gb|EIM88248.1| hypothetical protein STEHIDRAFT_155598 [Stereum hirsutum FP-91666
SS1]
Length = 457
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 89/132 (67%), Gaps = 4/132 (3%)
Query: 55 ANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA---EKEEVDSRS 111
A SK++ MK+R++E+E EA LRE+QA E G+ S A +K + DSRS
Sbjct: 25 AESKEIMLMKQRVEEMEREAMKLRELQAAAESADGSSGREGSAGAPMEGDDDKAQADSRS 84
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLN 170
IYVGNVDYA TPE++Q HFQ+ GT+NRVTIL DKF G PKG+AYVEF E + V AL L+
Sbjct: 85 IYVGNVDYAATPEDIQAHFQAAGTINRVTILCDKFTGHPKGYAYVEFAEPEHVDAALALD 144
Query: 171 ETELHGRQLKVS 182
+ HGR +K S
Sbjct: 145 NSLFHGRLIKGS 156
>gi|325087930|gb|EGC41240.1| RNP domain-containing protein [Ajellomyces capsulatus H88]
Length = 170
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 88/125 (70%), Gaps = 10/125 (8%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
E E P +++ MK+R+ E+E EA LREMQA ++++ ++++ +KE++
Sbjct: 13 ETHEKPGYEEEEIAAMKRRVAEMESEAAKLREMQASLDQQSESLRE---------DKEDI 63
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSI+VGNVDY +PEE+Q HFQSCG++NRVTIL DKF G PKG+AYVEF E V A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 123
Query: 167 LLLNE 171
L+LNE
Sbjct: 124 LVLNE 128
>gi|348544131|ref|XP_003459535.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Oreochromis niloticus]
Length = 284
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 119/207 (57%), Gaps = 17/207 (8%)
Query: 12 YGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIE 71
+G + +E D D E E D E + EDP +LE +K R++E+E
Sbjct: 4 FGNGLAEESLLDSDPGHPELEDPGVGDEEPGLEEGEAAIEDP-----ELEAIKARVREME 58
Query: 72 EEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHF 130
EEA L+E+Q +VEK+M + + EK E D RSIYVGNVDY T EE++ HF
Sbjct: 59 EEAEKLKELQNEVEKQMNLSPPPVGPVIMSIEEKMEADGRSIYVGNVDYGATAEELEAHF 118
Query: 131 QSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ A+ L+E+ GRQ+KV AKRTN P
Sbjct: 119 HGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMALDESLFRGRQIKVGAKRTNRP 178
Query: 190 GMK---------QFRGRRPNTFGFRGR 207
G+ +FR R N F R R
Sbjct: 179 GISTTDRGFPRARFRSRGGN-FSLRAR 204
>gi|260797827|ref|XP_002593902.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
gi|229279134|gb|EEN49913.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
Length = 166
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 86/130 (66%), Gaps = 8/130 (6%)
Query: 70 IEEEAGALREMQAKVEKEMGAVQDSSSTSATQA-------EKEEVDSRSIYVGNVDYACT 122
+EEEA L+EMQ +VE++M + AT +K E D RS+YVGNVDY T
Sbjct: 1 MEEEAEKLKEMQNEVERQMNLSPTAQRPGATAGVAFPSIEDKMEADGRSVYVGNVDYGAT 60
Query: 123 PEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
EE++ HF CG++NRVTIL DKF G PKGFAY+EF + D+++ A L+++ GRQ+KV
Sbjct: 61 AEELEAHFHGCGSINRVTILCDKFTGHPKGFAYIEFADKDSIETAKALDDSLFRGRQIKV 120
Query: 182 SAKRTNIPGM 191
KRTN PG+
Sbjct: 121 VPKRTNRPGV 130
>gi|348544129|ref|XP_003459534.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Oreochromis niloticus]
Length = 232
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 119/207 (57%), Gaps = 17/207 (8%)
Query: 12 YGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIE 71
+G + +E D D E E D E + EDP +LE +K R++E+E
Sbjct: 4 FGNGLAEESLLDSDPGHPELEDPGVGDEEPGLEEGEAAIEDP-----ELEAIKARVREME 58
Query: 72 EEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHF 130
EEA L+E+Q +VEK+M + + EK E D RSIYVGNVDY T EE++ HF
Sbjct: 59 EEAEKLKELQNEVEKQMNLSPPPVGPVIMSIEEKMEADGRSIYVGNVDYGATAEELEAHF 118
Query: 131 QSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ A+ L+E+ GRQ+KV AKRTN P
Sbjct: 119 HGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMALDESLFRGRQIKVGAKRTNRP 178
Query: 190 GMK---------QFRGRRPNTFGFRGR 207
G+ +FR R N F R R
Sbjct: 179 GISTTDRGFPRARFRSRGGN-FSLRAR 204
>gi|297737390|emb|CBI26591.3| unnamed protein product [Vitis vinifera]
Length = 151
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 81/107 (75%), Gaps = 14/107 (13%)
Query: 11 VYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEI 70
VYGGEIPDE + D D + + D + E+D + NSK++EDM+KRLKEI
Sbjct: 12 VYGGEIPDEGEMDADAE--------------DVDMVSRPEDDSDPNSKNIEDMRKRLKEI 57
Query: 71 EEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
EEEAGALREMQAKVEKEMGAVQDSSS SATQAEKEEVDSRSIYVGN+
Sbjct: 58 EEEAGALREMQAKVEKEMGAVQDSSSASATQAEKEEVDSRSIYVGNM 104
>gi|255731418|ref|XP_002550633.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131642|gb|EER31201.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 203
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 93/138 (67%), Gaps = 8/138 (5%)
Query: 56 NSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVG 115
N+ D +D +++++E+EA LRE Q + E V + T +K + DSRSIY+G
Sbjct: 26 NNDDGQDYSNKMEQVEQEAAKLRE-QLQAESTNNGV-----SFLTDEQKRDSDSRSIYIG 79
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL-LLNETE 173
NVDY P E+QQHF S G V+RVTI+TDK GQ KGFAY+EFV+ ++VQ A+ L+ +
Sbjct: 80 NVDYGTLPIELQQHFSSAGVVSRVTIMTDKITGQAKGFAYLEFVDAESVQKAVDTLDGST 139
Query: 174 LHGRQLKVSAKRTNIPGM 191
RQLKVSAKRTNIPG+
Sbjct: 140 FRERQLKVSAKRTNIPGI 157
>gi|299747315|ref|XP_002911154.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
gi|298407463|gb|EFI27660.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
Length = 194
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
K++ MK+R++E+E EA LRE+QA E G+ + A + D+RSIYVGNV
Sbjct: 26 KEIMLMKQRVEEMEREAKKLRELQAAAEASAGSEEPEGEAGAEDEKAAA-DARSIYVGNV 84
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
DY+ TPEE+Q HFQ+CG +NRVTIL DKF G PKG+AYVEF E + V A+ ++ + G
Sbjct: 85 DYSATPEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAVAMDNSLFKG 144
Query: 177 RQLKVSAKRTNIP 189
R LKV+AKRTNIP
Sbjct: 145 RLLKVTAKRTNIP 157
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 100/144 (69%), Gaps = 7/144 (4%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDS 109
EDP +LE +K R++E+EEEA L+E+Q +VEK+M + + + EK E D+
Sbjct: 47 EDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKMEADA 101
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL 168
RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ A+
Sbjct: 102 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTAMA 161
Query: 169 LNETELHGRQLKVSAKRTNIPGMK 192
L+E+ GRQ+KV KRTN PG+
Sbjct: 162 LDESLFRGRQIKVGVKRTNRPGIS 185
>gi|221483800|gb|EEE22112.1| RNA-binding protein, putative [Toxoplasma gondii GT1]
Length = 268
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A+ +EVD RS+YVGNVDY+ TP E+Q+HF+SCGT+NR+TI+ DK+ G PKG+AY+EF
Sbjct: 131 ADSDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIEFNSE 190
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
AVQNA+LL++T RQ+KV AKR NIPG
Sbjct: 191 AAVQNAILLSDTVFKQRQIKVVAKRKNIPGF 221
>gi|237843899|ref|XP_002371247.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211968911|gb|EEB04107.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221504196|gb|EEE29871.1| hypothetical protein TGVEG_008880 [Toxoplasma gondii VEG]
Length = 268
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A+ +EVD RS+YVGNVDY+ TP E+Q+HF+SCGT+NR+TI+ DK+ G PKG+AY+EF
Sbjct: 131 ADSDEVDRRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIEFNSE 190
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
AVQNA+LL++T RQ+KV AKR NIPG
Sbjct: 191 AAVQNAILLSDTVFKQRQIKVVAKRKNIPGF 221
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 112/182 (61%), Gaps = 7/182 (3%)
Query: 12 YGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIE 71
+G + +E D D E E D E + EDP +LE +K R++E+E
Sbjct: 4 FGNGLAEESLLDSDPGHPELEDPGVGDEEPGLEEGEAAIEDP-----ELEAIKARVREME 58
Query: 72 EEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHF 130
EEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF
Sbjct: 59 EEAEKLKELQNEVEKQMNMSPPPVGPVIMSFEEKMEADARSIYVGNVDYGATAEELEAHF 118
Query: 131 QSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ A+ L+E+ GRQ+KV AKRTN P
Sbjct: 119 HGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMALDESLFRGRQIKVVAKRTNRP 178
Query: 190 GM 191
G+
Sbjct: 179 GI 180
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 98/138 (71%), Gaps = 4/138 (2%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRSIYV 114
K+LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+RSIYV
Sbjct: 5 KELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYV 64
Query: 115 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETE 173
GNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+
Sbjct: 65 GNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESL 124
Query: 174 LHGRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 125 FRGRQIKVIPKRTNRPGI 142
>gi|401400261|ref|XP_003880750.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
gi|325115161|emb|CBZ50717.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
Length = 285
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 91/142 (64%), Gaps = 9/142 (6%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGA-VQDSSSTSATQ-------AEKEEVDSR 110
D ++++K EE A +L + A A D +S +Q + +EVD R
Sbjct: 87 DWDELQKLQYMTEEAAYSLVQSGASPHSAGAAGPTDGASPGGSQNVAGFANTDTDEVDRR 146
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
S+YVGNVDY+ TP E+Q+HF+SCGT+NR+TI+ DK+ G PKG+AY+EF AVQNA+LL
Sbjct: 147 SVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIEFNSEAAVQNAILL 206
Query: 170 NETELHGRQLKVSAKRTNIPGM 191
++T RQ+KV AKR NIPG
Sbjct: 207 SDTVFKQRQIKVVAKRKNIPGF 228
>gi|349803921|gb|AEQ17433.1| putative poly binding nuclear 1 [Hymenochirus curtipes]
Length = 255
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 101/145 (69%), Gaps = 9/145 (6%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEV 107
EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E
Sbjct: 77 EDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEA 131
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DK+ G PKGFAY+EF E ++V+ +
Sbjct: 132 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSEKESVRTS 191
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
+ L+E+ GRQ+KV AKRTN PG+
Sbjct: 192 MALDESLFRGRQIKVGAKRTNKPGI 216
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 98/138 (71%), Gaps = 4/138 (2%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRSIYV 114
K+LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+RSIYV
Sbjct: 5 KELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYV 64
Query: 115 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETE 173
GNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+
Sbjct: 65 GNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESL 124
Query: 174 LHGRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 125 FRGRQIKVIPKRTNRPGI 142
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 112/182 (61%), Gaps = 7/182 (3%)
Query: 12 YGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIE 71
+G + +E D D E E D E + EDP +LE +K R++E+E
Sbjct: 4 FGNGLAEESLLDSDPGHPELEDAGVGDEEPGLEEGEAAIEDP-----ELEAIKARVREME 58
Query: 72 EEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHF 130
EEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF
Sbjct: 59 EEAEKLKELQNEVEKQMNMSPPPVGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHF 118
Query: 131 QSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ A+ L+E+ GRQ+KV AKRTN P
Sbjct: 119 HGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMALDESLFRGRQIKVVAKRTNRP 178
Query: 190 GM 191
G+
Sbjct: 179 GI 180
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 120/207 (57%), Gaps = 17/207 (8%)
Query: 12 YGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIE 71
+G + +E D D E E D E + EDP +LE +K R++E+E
Sbjct: 4 FGNGLAEESLLDSDPGHPELEDPGVGDEEPGLEEGEAAIEDP-----ELEAIKARVREME 58
Query: 72 EEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHF 130
EEA L+E+Q +VEK+M + + EK E D+RSIYVGNVDY T EE++ HF
Sbjct: 59 EEAEKLKELQNEVEKQMNMSPPPVGPVIMSFEEKMEADARSIYVGNVDYGATAEELEAHF 118
Query: 131 QSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ A+ L+E+ GRQ+KV AKRTN P
Sbjct: 119 HGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRTAMALDESLFRGRQIKVVAKRTNRP 178
Query: 190 GMK---------QFRGRRPNTFGFRGR 207
G+ +FR R +F R R
Sbjct: 179 GISTTDRGFPRARFRSRG-GSFSSRAR 204
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 102 EADPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 156
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 157 MSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 216
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 217 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 250
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 88 EGDPGDSAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 142
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 143 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 202
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 203 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 236
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 102 ETDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 156
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 157 MSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 216
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 217 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 250
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 102 EADPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 156
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 157 MSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 216
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 217 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 250
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 104 EADPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 158
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 159 MSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 218
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 219 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 252
>gi|290984354|ref|XP_002674892.1| predicted protein [Naegleria gruberi]
gi|284088485|gb|EFC42148.1| predicted protein [Naegleria gruberi]
Length = 155
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 84/122 (68%), Gaps = 9/122 (7%)
Query: 70 IEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQH 129
++EE ++EMQ+++E+ + V ++ +EE+DSRSIYVGNVDY EE++ H
Sbjct: 1 MQEEHAKIKEMQSEIERNLSTVAEN---------QEEIDSRSIYVGNVDYGSVAEELENH 51
Query: 130 FQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
F+ G + R+TI +DK G PKGFAY+EF + +V+NAL LN + R+LKV AKRTNIP
Sbjct: 52 FKQAGDIIRITIKSDKMGNPKGFAYIEFKDKSSVENALQLNGSTFRNRELKVFAKRTNIP 111
Query: 190 GM 191
G+
Sbjct: 112 GL 113
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 107/186 (57%), Gaps = 33/186 (17%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+LE +K R++E+E+E L++++A+ + SS + + EVD RS+YVGNVD
Sbjct: 1 ELEAIKARVQEMEKEDERLKKLEAENRFLL------SSEAGLIPKTTEVDQRSVYVGNVD 54
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y T EE++ HF SCG VNRVTIL DKF G PKG+AY+EF E +V+ A+ L+E+ GR
Sbjct: 55 YGSTAEELESHFHSCGQVNRVTILCDKFSGHPKGYAYIEFEEKSSVKAAVELDESVFRGR 114
Query: 178 QLKVSAKRTNIPGMKQ----------------------FRGRRPNTFG--FRGRRPFIPG 213
+KV KRTN+PG+ +RG++P G +RGR +P
Sbjct: 115 VIKVLPKRTNMPGISSTDRGGYRGCFQARGGLSQHGGYYRGQQPRVRGRMYRGRARLLPW 174
Query: 214 VPFVPY 219
+ PY
Sbjct: 175 --YFPY 178
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 73 EGDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 127
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 128 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 187
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 188 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 221
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 75 EGDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 129
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 130 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 189
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 190 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 223
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 106 EGDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 160
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 161 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 220
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 221 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 106 EGDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 160
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 161 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 220
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 221 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 108 EGDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 162
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 163 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 222
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 223 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 256
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 106 EGDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 160
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 161 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 220
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 221 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 166 EGDPGDSAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 220
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ E+ E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 221 MSIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 280
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 281 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 314
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 100/145 (68%), Gaps = 9/145 (6%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEV 107
EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E
Sbjct: 106 EDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEA 160
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +
Sbjct: 161 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTS 220
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L L+E+ GRQ+KV KRTN PG+
Sbjct: 221 LALDESLFRGRQIKVVPKRTNRPGI 245
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 106 EGDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 160
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 161 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 220
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ D+V+ ++ L+++ GRQ+KV KRTN PG+
Sbjct: 221 SDKDSVRTSMALDDSLFRGRQIKVIPKRTNRPGI 254
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 106 ESDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 160
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ E+ E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 161 MSIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 220
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 221 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 106 EGDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 160
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 161 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 220
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ ++V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 221 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 254
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 100/145 (68%), Gaps = 9/145 (6%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEV 107
EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E
Sbjct: 105 EDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEA 159
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +
Sbjct: 160 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTS 219
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L L+E+ GRQ+KV KRTN PG+
Sbjct: 220 LALDESLFRGRQIKVVPKRTNRPGI 244
>gi|302697041|ref|XP_003038199.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
gi|300111896|gb|EFJ03297.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
Length = 344
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MK+R++E+E+EA LREMQ EK + + T+ +K D+RSIYVGNVDY+ T
Sbjct: 3 MKQRVEEMEKEAAKLREMQEAAEKASESGVSGGAPMDTEEDKTAADNRSIYVGNVDYSAT 62
Query: 123 PEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
PE++Q HFQ+CGT+NRVTIL DKF G PKG+AYVEF E + V A+ ++ + GR +K
Sbjct: 63 PEDIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAVTMDNSLFKGRLIK 121
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 108/196 (55%), Gaps = 25/196 (12%)
Query: 32 EHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALR---EMQAKVEKEM 88
EHD ++ + EDP +L +K R++E+E E R E + E+ +
Sbjct: 3 EHDMEYRYLEGEAMSGHINEDP-----ELMAIKARVQELEMEEQTERLKEEERCDAEEML 57
Query: 89 GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G 147
+ Q + T E+ + D+RS+YVGNVDY T +E++ HF CG VNRVTIL D+F G
Sbjct: 58 SSPQPGPFYNMTPEERMDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSG 117
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM----------KQFRGR 197
PKGFAY+EF + A Q+A+ L+ET GR LKV KRTN+PG+ RGR
Sbjct: 118 HPKGFAYIEFSDRSAAQSAVGLHETMFRGRVLKVLPKRTNMPGISTTDRGGHRGSHSRGR 177
Query: 198 ----RPNTF--GFRGR 207
RP + GFRGR
Sbjct: 178 GSGHRPPRYQNGFRGR 193
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSR 110
++ +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+R
Sbjct: 140 SSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADAR 199
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L
Sbjct: 200 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 259
Query: 170 NETELHGRQLKVSAKRTNIPGM 191
+E+ GRQ+KV KRTN PG+
Sbjct: 260 DESLFRGRQIKVIPKRTNRPGI 281
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 97/137 (70%), Gaps = 4/137 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRSIYVG 115
+LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+RSIYVG
Sbjct: 1 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 60
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+
Sbjct: 61 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 120
Query: 175 HGRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 121 RGRQIKVIPKRTNRPGI 137
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 97/137 (70%), Gaps = 4/137 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRSIYVG 115
+LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+RSIYVG
Sbjct: 20 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 79
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+
Sbjct: 80 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 139
Query: 175 HGRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 140 RGRQIKVIPKRTNRPGI 156
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSR 110
++ +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+R
Sbjct: 140 SSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADAR 199
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L
Sbjct: 200 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 259
Query: 170 NETELHGRQLKVSAKRTNIPGM 191
+E+ GRQ+KV KRTN PG+
Sbjct: 260 DESLFRGRQIKVIPKRTNRPGI 281
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 107/170 (62%), Gaps = 16/170 (9%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEM------GAVQDSSSTSATQAEKEEV 107
++ +LE +K R++E+EEEA L+E+Q +VEK+M G + + + EK E
Sbjct: 142 SSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNGEGVAPVIMSIEEKMEA 201
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +
Sbjct: 202 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTS 261
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMK---------QFRGRRPNTFGFRGR 207
+ L+E+ GRQ+KV KRTN PG+ +FR R N R R
Sbjct: 262 MALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARFRARATNYSSSRAR 311
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSR 110
++ +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+R
Sbjct: 140 SSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADAR 199
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L
Sbjct: 200 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 259
Query: 170 NETELHGRQLKVSAKRTNIPGM 191
+E+ GRQ+KV KRTN PG+
Sbjct: 260 DESLFRGRQIKVIPKRTNRPGI 281
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSR 110
++ +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+R
Sbjct: 140 SSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADAR 199
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + D+V+ ++ L
Sbjct: 200 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKDSVRTSMAL 259
Query: 170 NETELHGRQLKVSAKRTNIPGM 191
+++ GRQ+KV KRTN PG+
Sbjct: 260 DDSLFRGRQIKVIPKRTNRPGI 281
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 103/153 (67%), Gaps = 13/153 (8%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRSIYV 114
++LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+RSIYV
Sbjct: 6 QELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYV 65
Query: 115 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETE 173
GNVDY T EE++ HF CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ +L L+E+
Sbjct: 66 GNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESL 125
Query: 174 LHGRQLKVSAKRTNIPGMK---------QFRGR 197
GRQ+KV KRTN PG+ ++RGR
Sbjct: 126 FRGRQIKVIPKRTNRPGISTTDRGFPRTRYRGR 158
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 97/138 (70%), Gaps = 4/138 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRSIYVG 115
+LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+RSIYVG
Sbjct: 177 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 236
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+
Sbjct: 237 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 296
Query: 175 HGRQLKVSAKRTNIPGMK 192
GRQ+KV KRTN PG+
Sbjct: 297 RGRQIKVIPKRTNRPGIS 314
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 97/137 (70%), Gaps = 4/137 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRSIYVG 115
+LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+RSIYVG
Sbjct: 184 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 243
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+
Sbjct: 244 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 303
Query: 175 HGRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 304 RGRQIKVIPKRTNRPGI 320
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 94/150 (62%), Gaps = 17/150 (11%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAK----------------VEKEMGAVQDSSSTSATQA 102
+L+ ++ R++E+EEEA L+ + + + GA + + +
Sbjct: 26 ELKAIRMRVREMEEEAERLKGLSGQDKSIGVSTRPCMQTTHSKMTAGAYTEGPPQTLSAE 85
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
EK+E+D RS+YVGNVDY T ++++ HF SCG++NR+TIL DKF G PKG+AY+EF E +
Sbjct: 86 EKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERN 145
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+V A+ ++ET GR +KV KRTN+PG+
Sbjct: 146 SVDAAVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 97/137 (70%), Gaps = 4/137 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRSIYVG 115
+LE +K R++E+EEEA L+E+Q +VEK+M ++ + E+ E D+RSIYVG
Sbjct: 1 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEERMEADARSIYVG 60
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+
Sbjct: 61 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 120
Query: 175 HGRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 121 RGRQIKVIPKRTNRPGI 137
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 100/145 (68%), Gaps = 9/145 (6%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEV 107
EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E
Sbjct: 106 EDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEA 160
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DK+ G PKGFAY+EF + ++V+ +
Sbjct: 161 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTS 220
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L L+E+ GRQ+KV KRTN PG+
Sbjct: 221 LALDESLFRGRQIKVVPKRTNRPGI 245
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 34/182 (18%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAK--------------VEKEM--GAVQDSSSTSATQA 102
+L+ ++ R++E+EEEA L+ + + + +M G + +
Sbjct: 26 ELKAIRMRVREMEEEAERLKGLSGQDKSIGVSPRPCMKLIHSKMTAGEYTEGPPRPLSAE 85
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
EK+E+D RS+YVGNVDY T ++++ HF SCG++NR+TIL DKF G PKG+AY+EF E +
Sbjct: 86 EKKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERN 145
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-----------------RGRRPNTFGF 204
+V A+ ++ET GR +KV KRTN+PG+ RG+RP F
Sbjct: 146 SVDAAVTMDETVFRGRTIKVLPKRTNMPGISSTDRGGFRGRPRGNRGNYQRGQRPRGRPF 205
Query: 205 RG 206
RG
Sbjct: 206 RG 207
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 97/151 (64%), Gaps = 19/151 (12%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMG-----AVQDSSSTSATQA----------- 102
+L+ ++ R++E+EEEA L+ + + +K +G +Q + S A
Sbjct: 26 ELKAIRMRVREMEEEAERLKGLSGQ-DKSIGVSTRPCMQTTHSKMTAGAYTEGPPQPLSA 84
Query: 103 -EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
EK+E+D RS+YVGNVDY T ++++ HF SCG++NR+TIL DKF G PKG+AY+EF E
Sbjct: 85 EEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAER 144
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
++V A+ ++ET GR +KV KRTN+PG+
Sbjct: 145 NSVDAAVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 97/151 (64%), Gaps = 19/151 (12%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMG-----AVQDSSSTSATQA----------- 102
+L+ ++ R++E+EEEA L+ + + +K +G +Q + S A
Sbjct: 26 ELKAIRMRVREMEEEAERLKGLSGQ-DKSIGVSTRPCMQTTHSKMTAGAYTEGPPQPLSA 84
Query: 103 -EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
EK+E+D RS+YVGNVDY T ++++ HF SCG++NR+TIL DKF G PKG+AY+EF E
Sbjct: 85 EEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAER 144
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
++V A+ ++ET GR +KV KRTN+PG+
Sbjct: 145 NSVDAAVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 95 SSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFA 153
S+ +++VD RS+YVGNV+Y+ TP+ +Q++F+SCG +NR+TI+ DK+ G PKG+A
Sbjct: 26 STDRTNDTSQDDVDRRSVYVGNVEYSATPQNLQEYFKSCGQINRITIMVDKWTGHPKGYA 85
Query: 154 YVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
Y+EF + ++V+NALLLNET R +KV++KR NIPGM +
Sbjct: 86 YIEFAQEESVENALLLNETLFKERLIKVTSKRKNIPGMSR 125
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 99/158 (62%), Gaps = 17/158 (10%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAK--------------VEKEM--GAVQDS 94
E+ + + +L+ ++ R++E+EEEA L+ + + + +M GA +
Sbjct: 18 EECDLDDPELKAIRMRVREMEEEAERLKGLSGEDKSIGVSSRPCMKLIHSKMTAGAYTEG 77
Query: 95 SSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFA 153
+ EK+E+D RS+YVGNVDY T ++++ HF SCG++NR+TIL DKF G PKG+A
Sbjct: 78 PPRPLSAEEKKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYA 137
Query: 154 YVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
Y+EF E ++V A+ ++ET GR +KV KRTN+PG+
Sbjct: 138 YIEFAERNSVDVAVAMDETVFRGRTIKVLPKRTNMPGI 175
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
T ++ E D+RS+YVGNVDYA T EE++QHF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 1 TTEDRAEADARSVYVGNVDYAATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 60
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
+ ++V+ A+ L+++ GRQ+KVS KRTN PG+
Sbjct: 61 DKESVKTAMALDDSLFRGRQIKVSPKRTNRPGVSS 95
>gi|395508493|ref|XP_003758545.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Sarcophilus
harrisii]
Length = 384
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 102/193 (52%), Gaps = 36/193 (18%)
Query: 53 PNANSKDLEDMKKRLKEIEE--EAGALREM-----QAKVEKEMGAVQDSSSTS------- 98
P + +LED++ +L+ +EE E L+ M Q E+E+ A S S
Sbjct: 84 PQGDGWELEDIRTKLQRMEEAHEKQELKGMEGAEQQQPKERELTAQASSPLLSPALRDKE 143
Query: 99 --------------ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 144
T EK E D RS+YVGNVDY+ T EE++ HF CG +NRVTIL D
Sbjct: 144 AAHLLSTEHGIPFPGTPIEKLEADHRSVYVGNVDYSGTAEELESHFNCCGEINRVTILCD 203
Query: 145 KF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTF 202
K+ G PKG+AY+EF D+V+ A+ L+ET GR +KV KRTN+PG+ RG
Sbjct: 204 KYSGHPKGYAYIEFAYKDSVKTAMDLDETTFRGRIIKVLPKRTNLPGISTTDRG------ 257
Query: 203 GFRGRRPFIPGVP 215
G R R P G P
Sbjct: 258 GLRSRLPGRGGTP 270
>gi|327289636|ref|XP_003229530.1| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Anolis carolinensis]
Length = 262
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 108/198 (54%), Gaps = 16/198 (8%)
Query: 20 MDADIDVDEHEHEHDHDHDHEHEHDADNEN------EEDPNANSKDLEDMKKRLKEIEEE 73
+D+ DV E H + D E EEDP +LE +K +++E+E+E
Sbjct: 53 VDSPWDVAEISAWQKHLEEQTTLSPLDVETKDLLQKEEDP-----ELEAIKAKVREMEQE 107
Query: 74 AGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSC 133
L+E+QAK + + EK E D RSIYVGNVDY T E+++ HF +C
Sbjct: 108 E-WLQELQAKSLLL--SSDSGLAFHRMTEEKVEADQRSIYVGNVDYGGTAEQLESHFNNC 164
Query: 134 GTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK 192
G +NRVTIL DKF G PKG+AY+EF + +V+ A+ L+E+ R +KV KRTN+PG+
Sbjct: 165 GKINRVTILCDKFSGHPKGYAYIEFADKSSVKVAMELDESVFRDRVIKVLPKRTNMPGIS 224
Query: 193 QF-RGRRPNTFGFRGRRP 209
RG F RG P
Sbjct: 225 TTDRGGSRGRFHGRGALP 242
>gi|156097476|ref|XP_001614771.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803645|gb|EDL45044.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 202
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 116/205 (56%), Gaps = 36/205 (17%)
Query: 24 IDVDEHEHEHDHDHDHEHEHDADNENE--EDPNANSKDLEDMKKRLKEIEEEAGALREMQ 81
+++D+ HE + ++D N N +D N+ K+ D++K LK + E A EMQ
Sbjct: 4 MNLDQMNHE-------KGDNDGANFNVPVDDINSIDKEFSDLQK-LKMMNEGA----EMQ 51
Query: 82 AKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 141
+ S + + + E+EE+++RSI+VGNVDY+ PEE+Q F CG +NRVTI
Sbjct: 52 ---------MNQSGALDSHEMEQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTI 102
Query: 142 LTDK-FGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ-----FR 195
L +K G KG+AY+EF + +V+ AL L+E+ RQ+KV +KR NIPG + FR
Sbjct: 103 LVNKNTGHSKGYAYIEFADASSVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISPFR 162
Query: 196 GRRPN-TFGFRGR------RPFIPG 213
GR T G RGR RPF G
Sbjct: 163 GRSMKATLGPRGRLRQPSFRPFYRG 187
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + +
Sbjct: 37 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKE 96
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 97 SVRTSLALDESLFRGRQIKVIPKRTNRPGI 126
>gi|324537487|gb|ADY49506.1| Polyadenylate-binding protein 2, partial [Ascaris suum]
Length = 127
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 84/121 (69%), Gaps = 3/121 (2%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKE--MGAVQDSSSTSATQAEKEEVDSRSIYVG 115
K+++ + R+KEIEEEA LR +Q +VEK+ M + + + A+ +K E D+RSIY+G
Sbjct: 7 KEIDLLTSRMKEIEEEAAMLRRLQVEVEKQLNMNSSRPPARIYASLEDKVEADNRSIYIG 66
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NV T +E++ HF CG+VNRVTI TDKF G PKGFAY+EF E ++VQ A+ LNET
Sbjct: 67 NVGCFATADELRAHFYGCGSVNRVTIPTDKFTGHPKGFAYMEFTEKESVQTAMALNETLF 126
Query: 175 H 175
H
Sbjct: 127 H 127
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + +
Sbjct: 37 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKE 96
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 97 SVRTSLALDESLFRGRQIKVIPKRTNRPGI 126
>gi|298706878|emb|CBJ25842.1| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein
2) (Poly(A)-binding protein II) (PABII)
(Polyadenylate-binding nuclear protein 1) (Nuclear
poly(A)-binding protein 1) [Ectocarpus siliculosus]
Length = 265
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D S+YVG VDY TP+E+Q HF++CGT+NRVTIL DKF G+PKG+AY+EF + D +NA
Sbjct: 121 DESSVYVGQVDYDATPDELQSHFEACGTINRVTILCDKFSGRPKGYAYIEFADKDGSENA 180
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L L+ + GR LKV+ KRTN+PG+
Sbjct: 181 LALDNSPFKGRNLKVTPKRTNVPGL 205
>gi|167517171|ref|XP_001742926.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778025|gb|EDQ91640.1| predicted protein [Monosiga brevicollis MX1]
Length = 95
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDA 162
+EEVD+RSIYVGNV+YA T EE+Q F+ CG V R+ I+ DKF G PKGF YVEF E +A
Sbjct: 5 REEVDARSIYVGNVEYAATEEEIQALFKDCGVVKRIKIMRDKFTGHPKGFCYVEFAEPNA 64
Query: 163 VQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
V A+ L+E+ HGRQ+KV +KRTN+PG+ +
Sbjct: 65 VPLAMALDESMFHGRQIKVKSKRTNLPGLAR 95
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + +
Sbjct: 23 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKE 82
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+V+ +L L+E+ GRQ+KV KRTN PG+
Sbjct: 83 SVRTSLALDESLFRGRQIKVIPKRTNRPGI 112
>gi|159794905|pdb|2JWN|A Chain A, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
gi|159794906|pdb|2JWN|B Chain B, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
Length = 124
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
EK+E+D RS+YVGNVDY T ++++ HF SCG++NR+TIL DKF G PKG+AY+EF E +
Sbjct: 30 EKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERN 89
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
+V A+ ++ET GR +KV KRTN+PG+
Sbjct: 90 SVDAAVAMDETVFRGRTIKVLPKRTNMPGISS 121
>gi|291575265|gb|ADE10198.1| ePABP2 [Cynoglossus semilaevis]
Length = 260
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
T E+ + D+RSIYVGNVDY T +E++ HF +CG VNRVTIL D+F G PKGFAY+EF
Sbjct: 70 TPEERIDADNRSIYVGNVDYGATADELEIHFNACGPVNRVTILCDRFSGHPKGFAYIEFS 129
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK 192
+ D+VQ+A+ L+ET GR LKV KRTN+PG+
Sbjct: 130 DRDSVQSAIGLHETLFRGRVLKVLPKRTNMPGIS 163
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 102/157 (64%), Gaps = 9/157 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 75 EGDPGDSAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 129
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 130 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 189
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF 194
+ ++V+ +L L+E+ GRQ+KVS+ + + +F
Sbjct: 190 SDKESVRTSLALDESLFRGRQIKVSSMLVTVLVLCKF 226
>gi|221054742|ref|XP_002258510.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808579|emb|CAQ39282.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 202
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 107/188 (56%), Gaps = 22/188 (11%)
Query: 40 EHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA 99
+ HD N N + + +D+ + K ++++ L+ M + +M S +
Sbjct: 8 QMNHDKGNNNGPNFSVPVEDISTIDKEFSDLQK----LKMMNEGADMQM---NHSGGLDS 60
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFV 158
+ E+EE+++RSI+VGNVDY+ PEE+Q F CG +NRVTIL +K G KG+AY+EF
Sbjct: 61 HEMEQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFA 120
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ-----FRGR--RPNTFGFRGR---- 207
+ +V+ AL L+E+ RQ+KV +KR NIPG + FRGR +P +F RGR
Sbjct: 121 DASSVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPRISPFRGRSIKP-SFAPRGRLRQP 179
Query: 208 --RPFIPG 213
RPF G
Sbjct: 180 SFRPFYRG 187
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 102/157 (64%), Gaps = 9/157 (5%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 75 EGDPGDSAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 129
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF
Sbjct: 130 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 189
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF 194
+ ++V+ +L L+E+ GRQ+KVS+ + + +F
Sbjct: 190 SDKESVRTSLALDESLFRGRQIKVSSMLVTVLVLCKF 226
>gi|156082802|ref|XP_001608885.1| RNA binding protein [Babesia bovis T2Bo]
gi|154796135|gb|EDO05317.1| RNA binding protein, putative [Babesia bovis]
Length = 163
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 88/138 (63%), Gaps = 8/138 (5%)
Query: 77 LREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 136
L+++Q E +M + SA Q E +EVD RSIYVGNVDY+ P ++Q+ F++ G +
Sbjct: 15 LKKLQGMTECQM------ADESADQEENDEVDRRSIYVGNVDYSTKPHDLQEFFKASGQI 68
Query: 137 NRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFR 195
NR+TI+ DK+ G+PKG+AY+EF DAV NA++LN+ R +KV KR NIPG + R
Sbjct: 69 NRITIMVDKWTGKPKGYAYIEFASEDAVNNAVMLNDCLFKERIIKVIPKRKNIPGYNRKR 128
Query: 196 GRRPNTFGFRGRRPFIPG 213
+P+ RG RP G
Sbjct: 129 A-QPSRGRGRGFRPMRGG 145
>gi|428671247|gb|EKX72165.1| conserved hypothetical protein [Babesia equi]
Length = 146
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 76/106 (71%), Gaps = 5/106 (4%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
E E+VD RS+YVGNVDY+ P+E+Q+ F+S G +NR+TI+ DK+ G PKG+AY+EF D
Sbjct: 31 ENEDVDKRSVYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKWTGHPKGYAYIEFSSED 90
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGR 207
AV NA++LNE+ R +KV+ KR NIPG+ GR+ T RGR
Sbjct: 91 AVNNAVMLNESLFKERIIKVTPKRKNIPGL----GRKRPTGRSRGR 132
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 92 QDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPK 150
Q + T E+ + D+RSIYVGNVDY T +E++ HF CG VNRVTIL D+F G PK
Sbjct: 42 QSGPFYNMTPEERIDADNRSIYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPK 101
Query: 151 GFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
GFAY+EF + D+VQ+A+ L+ET GR LKV KRTN+PG+
Sbjct: 102 GFAYIEFSDRDSVQSAIGLHETLFRGRVLKVMPKRTNMPGI 142
>gi|345307423|ref|XP_001512125.2| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 412
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 4/140 (2%)
Query: 58 KDLEDMKKRLKEIE---EEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYV 114
++LE +K ++ E+E E A E + + + T EK E D+RS+YV
Sbjct: 101 QELEAIKIKIWELEKAHERMKACEEAAVVTDSFFLSTDAGALFPGTPKEKMEADNRSVYV 160
Query: 115 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETE 173
GNVDY T EE++ HF SCG +NRVTIL DKF G PKG+AY+EF +V+ A+ L+E+
Sbjct: 161 GNVDYGGTAEELESHFNSCGEINRVTILCDKFSGHPKGYAYIEFASESSVKAAVDLDEST 220
Query: 174 LHGRQLKVSAKRTNIPGMKQ 193
GR +KV KRTN+PG+
Sbjct: 221 FRGRIIKVLPKRTNMPGISS 240
>gi|397625742|gb|EJK67902.1| hypothetical protein THAOC_10991, partial [Thalassiosira oceanica]
Length = 525
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 90/149 (60%), Gaps = 5/149 (3%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS----STSATQ 101
D N + +DLE ++ + +EEEA + + +EK D++ S +A
Sbjct: 333 DPTNNDGGGEEEEDLEKLQAEIARMEEEAARIAQETEDLEKSKDGGTDAAKSDESKTAAA 392
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A+ + D S+YVG VDY+ TPEE+ HF+SCGTV RVTI+ DKF G+PKGFAY+EF
Sbjct: 393 ADGTKKDGHSVYVGQVDYSSTPEELLAHFESCGTVERVTIVCDKFTGKPKGFAYLEFQNE 452
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIP 189
AV+NA+ L+ + RQLKV+ KR N P
Sbjct: 453 SAVENAIKLDGSTFKERQLKVTPKRVNDP 481
>gi|359497153|ref|XP_002267022.2| PREDICTED: uncharacterized protein LOC100245696 [Vitis vinifera]
gi|296084732|emb|CBI25873.3| unnamed protein product [Vitis vinifera]
Length = 122
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 81/115 (70%), Gaps = 18/115 (15%)
Query: 5 DEQEHDVYGGEIPDE--MDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLED 62
DE+EH+VYGGEIPDE M+ D+D H+AD + + + K+L++
Sbjct: 2 DEEEHEVYGGEIPDEGEMEGDMDA----------------HNADVDMATNDDDAVKELDE 45
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
MKKRLKE+EEEA ALREMQAKVEKEMGAVQD +S + TQA KEE DSRS++VGNV
Sbjct: 46 MKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAVTQANKEEADSRSVFVGNV 100
>gi|417399667|gb|JAA46825.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 361
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 98/145 (67%), Gaps = 4/145 (2%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSR 110
++ +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+R
Sbjct: 140 SSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADAR 199
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L
Sbjct: 200 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 259
Query: 170 NETELHGRQLKVSAKRTNIPGMKQF 194
+E+ GRQ+KVS+ + + +F
Sbjct: 260 DESLFRGRQIKVSSMLVTVLVLCKF 284
>gi|417399469|gb|JAA46738.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 351
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 98/145 (67%), Gaps = 4/145 (2%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSR 110
++ +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+R
Sbjct: 140 SSGGWELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADAR 199
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
SIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L
Sbjct: 200 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLAL 259
Query: 170 NETELHGRQLKVSAKRTNIPGMKQF 194
+E+ GRQ+KVS+ + + +F
Sbjct: 260 DESLFRGRQIKVSSMLVTVLVLCKF 284
>gi|124507026|ref|XP_001352110.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505139|emb|CAD51921.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 202
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 13/183 (7%)
Query: 44 DADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE 103
+ D N E + + + + I++E L++++ E + + + + E
Sbjct: 5 NIDQMNAEKAKGDGANFKVQVDDINNIDKEFSDLQKLKMMNEGAEIQMNQGGNVDSHEQE 64
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDA 162
+EE+++RSI+VGNVDY+ PEE+Q F CG +NRVTIL +K G KG+AY+EF + +
Sbjct: 65 QEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASS 124
Query: 163 VQNALLLNETELHGRQLKVSAKRTNIPGMKQ-----FRGR-RPNTFGFRGR------RPF 210
V+ AL L+E+ RQ+KV +KR NIPG + FRGR + G RGR RPF
Sbjct: 125 VRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISPFRGRGMKSALGVRGRLRQPSFRPF 184
Query: 211 IPG 213
G
Sbjct: 185 YRG 187
>gi|358009812|pdb|3UCG|A Chain A, Crystal Structure Of A Rna Binding Domain Of Hypothetical
Polyadenylate-Binding Protein (Pabpn1) From Homo Sapiens
At 1.95 A Resolution
Length = 89
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQ 164
E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+
Sbjct: 3 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 62
Query: 165 NALLLNETELHGRQLKVSAKRTNIPGM 191
+L L+E+ GRQ+KV KRTN PG+
Sbjct: 63 TSLALDESLFRGRQIKVIPKRTNRPGI 89
>gi|165761289|pdb|3B4D|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761291|pdb|3B4M|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761292|pdb|3B4M|B Chain B, Crystal Structure Of Human Pabpn1 Rrm
gi|165761293|pdb|3B4M|C Chain C, Crystal Structure Of Human Pabpn1 Rrm
gi|165761294|pdb|3B4M|D Chain D, Crystal Structure Of Human Pabpn1 Rrm
Length = 96
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQ 164
E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+
Sbjct: 2 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVR 61
Query: 165 NALLLNETELHGRQLKVSAKRTNIPGM 191
+L L+E+ GRQ+KV KRTN PG+
Sbjct: 62 TSLALDESLFRGRQIKVIPKRTNRPGI 88
>gi|70943999|ref|XP_741979.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56520699|emb|CAH74539.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 194
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 95/161 (59%), Gaps = 17/161 (10%)
Query: 50 EEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEV 107
EE+ A D+ ++ K ++++ L+ M E +M G DS + E+EE+
Sbjct: 15 EENFRAQVDDINNIDKEFSDLQK----LKMMNDGAEMQMNQGGAPDSH-----EMEQEEI 65
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNA 166
++RSI+VGNVDY+ PEE+Q F CG +NRVTIL +K G KG+AY+EF + +V+ A
Sbjct: 66 NNRSIFVGNVDYSTQPEELQSLFSECGVINRVTILVNKNTGHSKGYAYIEFADPSSVRTA 125
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGR 207
L L+E+ RQ+KV +KR NIPG RP FRGR
Sbjct: 126 LSLSESFFKKRQIKVCSKRRNIPGFN-----RPRMSAFRGR 161
>gi|68076033|ref|XP_679936.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56500788|emb|CAH95197.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 172
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 96/159 (60%), Gaps = 13/159 (8%)
Query: 50 EEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDS 109
EE+ A+ D+ ++ K ++++ L+ M E +M + + + + E+EE+++
Sbjct: 13 EENFRAHDDDINNIDKEFSDLQK----LKMMNDGAEMQM---NQTGAPDSHEMEQEEINN 65
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGNVDY+ PEE+Q F CG +NRVTIL +K G KG+AY+EF + +V+ AL
Sbjct: 66 RSIFVGNVDYSTQPEELQSLFSECGIINRVTILVNKNTGHSKGYAYIEFADPSSVRTALS 125
Query: 169 LNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGR 207
L+E+ RQ+KV +KR NIPG RP FRGR
Sbjct: 126 LSESFFKKRQIKVCSKRRNIPGFN-----RPRMGAFRGR 159
>gi|396461545|ref|XP_003835384.1| hypothetical protein LEMA_P047250.1 [Leptosphaeria maculans JN3]
gi|312211935|emb|CBX92019.1| hypothetical protein LEMA_P047250.1 [Leptosphaeria maculans JN3]
Length = 186
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 92/159 (57%), Gaps = 32/159 (20%)
Query: 34 DHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD 93
D D + E D + EDPN +++ M++R++E+E+EA LREMQ ++ E +++
Sbjct: 3 DVDAAQKREEDERLDTAEDPN-EEEEISAMRRRVQEMEDEAAKLREMQQSLDNERHEMRE 61
Query: 94 SSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF 152
S KE+VD+RS++VGNVDY +PEE+Q HFQS G++NRVTIL DKF G PKG
Sbjct: 62 S---------KEDVDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKG- 111
Query: 153 AYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ R LKV KRTN+PGM
Sbjct: 112 --------------------QFRDRNLKVVPKRTNLPGM 130
>gi|410912492|ref|XP_003969723.1| PREDICTED: polyadenylate-binding protein 2-like [Takifugu rubripes]
Length = 262
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 9/129 (6%)
Query: 66 RLKEIEE-EAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
RLKE E +AG ++ M + + + T E+ + D+RS+YVGNVDY T +
Sbjct: 44 RLKEDERCDAGEMQLMTC-------SPRPGPFYNMTPEERIDADNRSVYVGNVDYGATAD 96
Query: 125 EVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
E++ HF CG VNRVTIL D+F G PKGFAY+EF + D+V +A+ L+ET GR LKV
Sbjct: 97 ELEIHFNGCGPVNRVTILCDRFSGHPKGFAYIEFSDRDSVNSAIGLHETLFRGRVLKVLP 156
Query: 184 KRTNIPGMK 192
KRTN+PG+
Sbjct: 157 KRTNLPGIS 165
>gi|268536830|ref|XP_002633550.1| Hypothetical protein CBG05418 [Caenorhabditis briggsae]
Length = 181
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 87/137 (63%), Gaps = 13/137 (9%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIY 113
N NS D+E IE EA LR++Q K+ ++M A + T E++E+D+RS++
Sbjct: 5 NCNSMDME--------IEAEAAVLRDIQNKMAEKMAA----KTVPQTAEEQKEIDARSVF 52
Query: 114 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLLNET 172
VGNVD+ T E+Q HF+ CG + R TI DKF + K FAY+EF ++++NAL++N +
Sbjct: 53 VGNVDFGSTIAEIQDHFKGCGVIVRTTIPKDKFTKRQKNFAYIEFESSESIENALVMNGS 112
Query: 173 ELHGRQLKVSAKRTNIP 189
RQ+ V+AKRTN+P
Sbjct: 113 LFRARQIVVTAKRTNVP 129
>gi|115402163|ref|XP_001217158.1| polyadenylate-binding protein 2 [Aspergillus terreus NIH2624]
gi|114189004|gb|EAU30704.1| polyadenylate-binding protein 2 [Aspergillus terreus NIH2624]
Length = 185
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 85/133 (63%), Gaps = 11/133 (8%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDY 119
+ MK+R+ E+E EA LREMQA ++++ +++ +KEE+D+RSI+VGNVDY
Sbjct: 26 IAAMKRRVAEMESEAAKLREMQATLDQQSENLRE---------DKEEIDARSIFVGNVDY 76
Query: 120 ACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
+PEE+Q HFQSCG++NRVTIL DKF GQPKG N+ + + + Q
Sbjct: 77 GASPEEIQAHFQSCGSINRVTILLDKFTGQPKGMPTSNLQSPVWWPNSGVKRKC-VPWSQ 135
Query: 179 LKVSAKRTNIPGM 191
+V KRTN+PGM
Sbjct: 136 SEVVPKRTNLPGM 148
>gi|344292774|ref|XP_003418100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Loxodonta africana]
Length = 280
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 13/161 (8%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEE--EAGALREMQAKVEKEMG----------AVQD 93
+ EN + A ++LE ++ +L +E+ E L +Q V E G + +
Sbjct: 73 ERENLAECPAPDQELEAIRLKLWAMEQAGEPPGLPNIQGVVPGEEGTGIMLAGGLLSPET 132
Query: 94 SSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF 152
+ EKEEVD RSIYVGNVDY T EE++ +F CG ++RVTIL DKF G PKG+
Sbjct: 133 GLPFPESPQEKEEVDHRSIYVGNVDYGATAEELEAYFNPCGEIHRVTILCDKFSGHPKGY 192
Query: 153 AYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
AY+EF +VQ A+ L+E+ R +KV KRTN PG+
Sbjct: 193 AYIEFAATTSVQAAVKLDESVFRDRVIKVCPKRTNFPGISS 233
>gi|344242620|gb|EGV98723.1| Polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 244
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 91/128 (71%), Gaps = 4/128 (3%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRSIYVG 115
+LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E D+RSIYVG
Sbjct: 29 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVG 88
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETEL 174
NVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+
Sbjct: 89 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 148
Query: 175 HGRQLKVS 182
GRQ+KVS
Sbjct: 149 RGRQIKVS 156
>gi|410984123|ref|XP_003998381.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Felis catus]
Length = 277
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 102/182 (56%), Gaps = 21/182 (11%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGA---LREMQAKVEKEMGAV--------QDSSS 96
E E P A+ ++LE +K +L +E+ G + QA E+ GA + +
Sbjct: 74 ELAEYPEAD-QELEAIKVKLWAMEQAQGPEPPGAQGQAGREEGAGATPAGQLLSPEAGCT 132
Query: 97 TSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYV 155
E+ E D RS+YVGNVDY T EE++ +F SCG V+RVTIL DKF G PKG+AY+
Sbjct: 133 CPGPPTEQLESDHRSVYVGNVDYGGTAEELEAYFNSCGEVHRVTILCDKFSGHPKGYAYI 192
Query: 156 EFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPGV 214
EF + Q A+ L+++ GR +KV KRTN+PG+ RG GFRG RP G
Sbjct: 193 EFAAESSAQAAVALDKSIFRGRVIKVLPKRTNLPGISSTDRG------GFRG-RPGARGG 245
Query: 215 PF 216
PF
Sbjct: 246 PF 247
>gi|164651984|gb|ABY64767.1| ePABP2 [Homo sapiens]
Length = 278
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 100/183 (54%), Gaps = 19/183 (10%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALR--EMQAKVEKEMGAVQD--------SS 95
+ EN + +++LE +K ++ +E+ G R +Q + E+E G
Sbjct: 73 EQENLAECPLPNQELEAIKMKVCAMEQAEGTPRPPRVQQQAEEEEGTAAGQLLSPETVGC 132
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
S T EK E D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY
Sbjct: 133 PLSGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAY 192
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPG 213
+EF +VQ A+ L+++ GR +KV KRTN PG+ RG G RG P G
Sbjct: 193 IEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRG------GLRG-HPGSRG 245
Query: 214 VPF 216
PF
Sbjct: 246 APF 248
>gi|126304970|ref|XP_001376941.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Monodelphis domestica]
Length = 322
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
T EK E D RS+YVGNVDY+ T +E++ HF CG +NRVTIL DK+ G PKG+AY+EF
Sbjct: 159 GTAMEKVESDQRSVYVGNVDYSGTAKELESHFSCCGEINRVTILCDKYSGHPKGYAYIEF 218
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPF 210
D+V+ A L+ET GR +KV KRTN PG+ RG N RG P
Sbjct: 219 AHEDSVKTAAELDETTFRGRIIKVLPKRTNFPGISTTNRGGPRNRLSGRGCPPL 272
>gi|219120225|ref|XP_002180856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407572|gb|EEC47508.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 97
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+ SIYVG VDY+ TPEE+ HF++CGTV RVTI+ DKF G+PKGFAY+EF +V+NA
Sbjct: 1 DNYSIYVGQVDYSTTPEELLAHFEACGTVERVTIVCDKFTGKPKGFAYLEFENESSVENA 60
Query: 167 LLLNETELHGRQLKVSAKRTNIPGM 191
L L+E+E GRQLK++ KR N PGM
Sbjct: 61 LKLDESEFKGRQLKITHKRVNQPGM 85
>gi|448537326|ref|XP_003871310.1| cytoplasmic RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380355667|emb|CCG25185.1| cytoplasmic RNA-binding protein [Candida orthopsilosis]
Length = 216
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 93/144 (64%), Gaps = 15/144 (10%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSST-------SATQ--AEKEEVDS 109
+LE K+RL+E++ A+ + Q + DSS++ +A Q AE+ E D+
Sbjct: 37 ELEQEKRRLQELD----AVLDAQDHNTYTNPDLVDSSNSGDASGVPTAAQLDAERRESDA 92
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL- 167
RS+Y+GNVDY TP E+QQHF GTVNRVTI+T+K GQPKGFAY+EF ++D++ A+
Sbjct: 93 RSVYIGNVDYPTTPLELQQHFSPAGTVNRVTIMTNKVTGQPKGFAYLEFSDVDSMNKAVA 152
Query: 168 LLNETELHGRQLKVSAKRTNIPGM 191
L+ + R LKV KRTNIPG+
Sbjct: 153 TLDGSIFRDRPLKVLPKRTNIPGV 176
>gi|312283705|ref|NP_001073956.2| embryonic polyadenylate-binding protein 2 [Homo sapiens]
gi|205716472|sp|A6NDY0.1|EPAB2_HUMAN RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
Length = 278
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 99/183 (54%), Gaps = 19/183 (10%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALRE--MQAKVEKEMGAVQD--------SS 95
+ EN + ++LE +K ++ +E+ G R +Q + E+E G
Sbjct: 73 EQENLAECPLPDQELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPETVGC 132
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
S T EK E D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY
Sbjct: 133 PLSGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAY 192
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPG 213
+EF +VQ A+ L+++ GR +KV KRTN PG+ RG G RG P G
Sbjct: 193 IEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRG------GLRG-HPGSRG 245
Query: 214 VPF 216
PF
Sbjct: 246 APF 248
>gi|151555091|gb|AAI48674.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|162319022|gb|AAI56596.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|261860988|dbj|BAI47016.1| Embryonic polyadenylate-binding protein 2 [synthetic construct]
Length = 289
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 99/183 (54%), Gaps = 19/183 (10%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALRE--MQAKVEKEMGAVQD--------SS 95
+ EN + ++LE +K ++ +E+ G R +Q + E+E G
Sbjct: 73 EQENLAECPLPDQELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPETVGC 132
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
S T EK E D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY
Sbjct: 133 PLSGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAY 192
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPG 213
+EF +VQ A+ L+++ GR +KV KRTN PG+ RG G RG P G
Sbjct: 193 IEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRG------GLRG-HPGSRG 245
Query: 214 VPF 216
PF
Sbjct: 246 APF 248
>gi|71026927|ref|XP_763107.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350060|gb|EAN30824.1| RNA binding protein, putative [Theileria parva]
Length = 151
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 10/127 (7%)
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RL +++E L+++Q + +M V D T E+VD RSIYVGNVDY+ P+E
Sbjct: 7 RLTVLDDE---LKQLQGMTDCQM--VTDDMDTD----NHEDVDKRSIYVGNVDYSTKPQE 57
Query: 126 VQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
+Q+ F+S G +NR+TI+ DK+ G PKG+AYVEF DAV NA++LNE+ R +KV K
Sbjct: 58 LQEFFKSSGQINRITIMVDKYTGHPKGYAYVEFSNEDAVNNAIMLNESLFKERIIKVIPK 117
Query: 185 RTNIPGM 191
R NIPG
Sbjct: 118 RKNIPGF 124
>gi|403223382|dbj|BAM41513.1| predicted protein [Theileria orientalis strain Shintoku]
Length = 150
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 70/96 (72%), Gaps = 4/96 (4%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAV 163
E+VD RSIYVGNVDY+ P+E+Q+ F+S G +NR+TI+ DK+ G PKG+AYVEF DAV
Sbjct: 37 EDVDRRSIYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKWTGHPKGYAYVEFSSEDAV 96
Query: 164 QNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRP 199
NA++LN++ R +KV KR NIPG F RRP
Sbjct: 97 GNAVMLNDSLFKERIIKVIPKRKNIPG---FNRRRP 129
>gi|353235207|emb|CCA67223.1| related to poly(a) binding protein II [Piriformospora indica DSM
11827]
Length = 173
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 79 EMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNR 138
E AK ++ ++ A + ++ D+RSIYVGNVDY TPEE+Q HF SCGT+NR
Sbjct: 59 ETAAKTSGGSTPGANADASGADFSTDDDADARSIYVGNVDYGATPEEIQAHFASCGTINR 118
Query: 139 VTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
VTIL DKF G PKG+AYVEF + V+ AL+LNE+ GR +KV
Sbjct: 119 VTILLDKFTGHPKGYAYVEFAQPAHVEAALVLNESLFRGRLIKV 162
>gi|341895844|gb|EGT51779.1| hypothetical protein CAEBREN_09841 [Caenorhabditis brenneri]
Length = 187
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 86/122 (70%), Gaps = 3/122 (2%)
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
EIEEE L++MQ K+ +E+ + +S S E++E+D+RS++VGNVD+ T EE++
Sbjct: 14 EIEEERLVLQDMQKKMAEELNKSERASPPST--EEQKEIDARSVFVGNVDFGSTIEELEA 71
Query: 129 HFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTN 187
HF+ CGT+ R TI DK+ Q K FAY+EF + D+V+ AL+++ET R++ V+AKRTN
Sbjct: 72 HFKGCGTITRTTIPKDKYTQRQKNFAYIEFEDKDSVEMALVMHETMFRDRRIVVTAKRTN 131
Query: 188 IP 189
+P
Sbjct: 132 VP 133
>gi|403260900|ref|XP_003922888.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 274
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 92/169 (54%), Gaps = 17/169 (10%)
Query: 58 KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQD--------SSSTSATQAEKEEVDS 109
++LE +K ++ +E+ G A+ +E GAV T EK E D
Sbjct: 83 QELEAIKMKVWAMEQAEGLRWPPGAQRGEEEGAVAGQLLSLETAGHPIPGTPEEKVEADH 142
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL 168
RS+YVGNVDY + EE++ HF CG V RVTIL DKF G PKG+AY+EF +VQ A+
Sbjct: 143 RSVYVGNVDYGGSAEELEAHFSCCGKVYRVTILCDKFSGHPKGYAYIEFATKGSVQAAVQ 202
Query: 169 LNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPGVPF 216
L+++ GR +KV KRTN PG+ RG G RG P G PF
Sbjct: 203 LDQSLFRGRVIKVLPKRTNFPGISSTDRG------GLRG-HPGSRGAPF 244
>gi|338723296|ref|XP_001488137.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Equus
caballus]
Length = 271
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 12/146 (8%)
Query: 58 KDLEDMKKRLKEIEEEAGA-LREMQAKVEKEMG----------AVQDSSSTSATQAEKEE 106
++LE +K +L +E+ G +QA+ +E G + + + T EK +
Sbjct: 77 QELEAIKLKLWAMEQAQGLEPPRVQAQAREEAGTGTTLAGQLLSPKTGCPSPGTPTEKVQ 136
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQN 165
D RSIYVGNVDY T EE++ +F CG + RVTIL DKF G PKG+AY+EF A Q
Sbjct: 137 ADHRSIYVGNVDYGGTAEELEAYFNQCGEIRRVTILCDKFSGHPKGYAYIEFATESAAQT 196
Query: 166 ALLLNETELHGRQLKVSAKRTNIPGM 191
A+ L+E+ GR +KV KRTN+PG+
Sbjct: 197 AVELDESIFRGRVIKVLPKRTNLPGI 222
>gi|389583077|dbj|GAB65813.1| RNA-binding protein, partial [Plasmodium cynomolgi strain B]
Length = 213
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEID 161
E+EE+++RSI+VGNVDY+ PEE+Q F CG +NRVTIL +K G KG+AY+EF +
Sbjct: 22 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADAS 81
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGR 207
+V+ AL L+E+ RQ+KV +KR NIPG RP FRGR
Sbjct: 82 SVRTALSLSESFFKKRQIKVCSKRRNIPGFN-----RPKISPFRGR 122
>gi|344302535|gb|EGW32809.1| hypothetical protein SPAPADRAFT_60154 [Spathaspora passalidarum
NRRL Y-27907]
Length = 171
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 7/110 (6%)
Query: 91 VQDSSSTSATQ-----AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 145
VQ+S+S S A++EE+DSRSIYVGNVDY TPE+++Q F G + RVTIL D+
Sbjct: 9 VQESNSQSDVDNAEKLAKQEEIDSRSIYVGNVDYQSTPEQLEQFFHVVGIIERVTILFDR 68
Query: 146 F-GQPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKVSAKRTNIPGMKQ 193
F G PKG+AY+EF + +VQ A+ LN E GR+L+V++KRTN+PG ++
Sbjct: 69 FSGLPKGYAYIEFEKSVSVQQAIDELNGKEFRGRELRVTSKRTNLPGFRK 118
>gi|308459095|ref|XP_003091873.1| hypothetical protein CRE_30215 [Caenorhabditis remanei]
gi|308254853|gb|EFO98805.1| hypothetical protein CRE_30215 [Caenorhabditis remanei]
Length = 182
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 91/141 (64%), Gaps = 11/141 (7%)
Query: 52 DPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS 111
D N+N +E+ E++ EA L+E+Q ++ ++M + + T+ E++ +D++S
Sbjct: 5 DNNSNFCSMEE------ELQAEARVLKEIQNRLSEKM----EIGKLTPTEEEQKAIDAKS 54
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP-KGFAYVEFVEIDAVQNALLLN 170
I+VGNVDY T EE++ HF CGT+ R TI DKF + K FAY+EF + +V+NA ++N
Sbjct: 55 IFVGNVDYGATVEELEAHFMGCGTIVRTTIPKDKFTKKQKNFAYIEFESVASVENATVMN 114
Query: 171 ETELHGRQLKVSAKRTNIPGM 191
+ GRQ+ V+AKRTN PG+
Sbjct: 115 ASIFRGRQIVVTAKRTNKPGL 135
>gi|85000163|ref|XP_954800.1| RNA poly(A)-binding protein [Theileria annulata strain Ankara]
gi|65302946|emb|CAI75324.1| RNA poly(A)-binding protein, putative [Theileria annulata]
Length = 176
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 83/126 (65%), Gaps = 10/126 (7%)
Query: 66 RLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEE 125
RL +++E L+++Q + +M + D T E+VD RSIYVGNVDY+ P+E
Sbjct: 7 RLTVLDDE---LKQLQGMTDCQM--LTDDMDTD----NNEDVDKRSIYVGNVDYSTKPQE 57
Query: 126 VQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
+Q+ F+S G +NR+TI+ DK+ G PKG+AYVEF DAV NA++LNE+ R +KV K
Sbjct: 58 LQEFFKSSGQINRITIMVDKYTGHPKGYAYVEFSNEDAVNNAIMLNESLFKERIIKVIPK 117
Query: 185 RTNIPG 190
R NIPG
Sbjct: 118 RKNIPG 123
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 79 EMQAKVEKEMGAVQDSS-STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVN 137
+MQ +VE++ ++ T E+ + D RSIYVGNVDY T +E++ +F SCG VN
Sbjct: 5 DMQYEVERQFPYSPEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMYFNSCGHVN 64
Query: 138 RVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK 192
RVTI ++F G PKGFAY+EF + ++V+ A+ L+ET GR +KVS KRTNIPG
Sbjct: 65 RVTIPYNRFTGHPKGFAYIEFSDRESVRTAMALDETLFRGRVIKVSPKRTNIPGFS 120
>gi|426383231|ref|XP_004058190.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Gorilla
gorilla gorilla]
Length = 275
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 98/183 (53%), Gaps = 19/183 (10%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALRE--MQAKVEKEMGAVQD--------SS 95
+ EN + ++LE +K ++ +E+ G R +Q + E+E G
Sbjct: 70 EQENLAECPVPDQELEAIKMKVCAMEQAEGTPRPPGVQHQAEEEEGTAAGQLLSPETMGC 129
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
T EK E D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY
Sbjct: 130 PLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAY 189
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPG 213
+EF +VQ A+ L+++ GR +KV KRTN PG+ RG G RG P G
Sbjct: 190 IEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRG------GLRG-HPGSRG 242
Query: 214 VPF 216
PF
Sbjct: 243 APF 245
>gi|332846661|ref|XP_003315290.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan
troglodytes]
Length = 266
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 98/183 (53%), Gaps = 19/183 (10%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALRE--MQAKVEKEMGAV--------QDSS 95
+ EN + ++LE +K ++ +E+ G R +Q + E+E G
Sbjct: 73 EQENLAECPLPDQELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPETTGC 132
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
T EK E D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY
Sbjct: 133 RLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAY 192
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPG 213
+EF +VQ A+ L+++ GR +KV KRTN PG+ RG G RG P G
Sbjct: 193 IEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRG------GLRG-HPGSRG 245
Query: 214 VPF 216
PF
Sbjct: 246 APF 248
>gi|397468279|ref|XP_003805819.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan paniscus]
Length = 278
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 98/183 (53%), Gaps = 19/183 (10%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALRE--MQAKVEKEMGAV--------QDSS 95
+ EN + ++LE +K ++ +E+ G R +Q + E+E G
Sbjct: 73 EQENLAECPLPDQELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPETTGC 132
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
T EK E D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY
Sbjct: 133 RLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAY 192
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPG 213
+EF +VQ A+ L+++ GR +KV KRTN PG+ RG G RG P G
Sbjct: 193 IEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRG------GLRG-HPGSRG 245
Query: 214 VPF 216
PF
Sbjct: 246 APF 248
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 78/122 (63%), Gaps = 13/122 (10%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
T E+ + D RSIYVGNVDY T +E++ +F SCG VNRVTI ++F G PKGFAY+EF
Sbjct: 56 THEERIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFS 115
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGM-----------KQFRGRRPNTFG-FRG 206
+ ++V+ A+ L+ET GR +KVS KRTNIPG + RG R + F FRG
Sbjct: 116 DRESVRTAMALDETLFRGRVIKVSPKRTNIPGFSTTDVYLRGGWSRGRGVRASRFNPFRG 175
Query: 207 RR 208
R
Sbjct: 176 CR 177
>gi|351698678|gb|EHB01597.1| Polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 118
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 79/117 (67%), Gaps = 4/117 (3%)
Query: 72 EEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
EEA L+E+Q ++EK+M ++ + E+ E D+RSIYVGNVDY T EE++
Sbjct: 2 EEAEKLKELQNEIEKQMNMSPPPGNAGPVIMSIEERMETDARSIYVGNVDYGATAEELEA 61
Query: 129 HFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
HF CG+VN VTIL DKF G PKGFAY++F + ++V+ +L L+E+ GRQ+KV K
Sbjct: 62 HFHGCGSVNYVTILCDKFSGHPKGFAYMKFSDKESVRTSLALDESLFRGRQIKVIPK 118
>gi|330846765|ref|XP_003295173.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
gi|325074172|gb|EGC28303.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
Length = 145
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 73/100 (73%), Gaps = 8/100 (8%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEID 161
++EE+D RSIYVGNVDY T +++ +FQSCGTVNR+TIL+DK G PKG YVEF+ +
Sbjct: 1 DQEEIDGRSIYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFLNKE 60
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIP-------GMKQF 194
++ NA+ LN++ + RQ+K++ KRTN+P G +QF
Sbjct: 61 SINNAMALNDSIFNDRQIKITPKRTNLPYYMRNPGGTRQF 100
>gi|168038419|ref|XP_001771698.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677005|gb|EDQ63481.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 746
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 27/185 (14%)
Query: 57 SKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA------TQAEKEEVDSR 110
SKD+ +MKKRL++++ + LR QA+V KE VQ+S + Q +E+++ R
Sbjct: 502 SKDVLEMKKRLRQVQLDMTKLRARQAEVSKE---VQNSPAAGVRSIPFEPQPSQEDINDR 558
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLL 169
S++V NV +A T ++ HF CG VNRVT+L + G+PKG A+VEF DAV+NAL L
Sbjct: 559 SVFVTNVHFAATQAALRVHFGGCGYVNRVTLLVEPATGKPKGSAFVEFTTKDAVENALAL 618
Query: 170 NETELHGRQLKVSAKRTNI------PGMKQFRGRRPNTFG-----------FRGRRPFIP 212
NE+ L R LKV K + I P + P + G + RRP P
Sbjct: 619 NESSLLSRNLKVMRKDSAIAEMNPDPSLSSSFIPPPFSRGHPREHMPPHKIYLARRPIGP 678
Query: 213 GVPFV 217
+P++
Sbjct: 679 PMPYM 683
>gi|448105136|ref|XP_004200421.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|448108271|ref|XP_004201052.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359381843|emb|CCE80680.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359382608|emb|CCE79915.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
Length = 184
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Query: 95 SSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFA 153
SS S QA+ EE D RSIY+GNVDY TPE+++ F + G V RVTIL DKF G PKG+A
Sbjct: 37 SSDSTLQAQ-EEADKRSIYIGNVDYQSTPEQLENFFSTVGAVKRVTILFDKFSGFPKGYA 95
Query: 154 YVEFVEIDAVQNAL-LLNETELHGRQLKVSAKRTNIPGMK 192
YVEF E ++ Q A+ LN + GR+L+V KRTNIPG +
Sbjct: 96 YVEFEEYESAQKAIEELNGSPFRGRELRVMTKRTNIPGQR 135
>gi|354548064|emb|CCE44800.1| hypothetical protein CPAR2_406030 [Candida parapsilosis]
Length = 173
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A++EE DSRS+YVGNVDY TPE++++ F+ G ++RVTIL DK+ G PKG+AYVEF I
Sbjct: 27 AKQEEADSRSVYVGNVDYKATPEQLEEFFRPVGVIDRVTILFDKYSGLPKGYAYVEFENI 86
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIP 189
++V A+ L+ E GR+++VS KRTNIP
Sbjct: 87 ESVNKAVDLHGKEFRGREIRVSPKRTNIP 115
>gi|395748220|ref|XP_003778730.1| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Pongo abelii]
Length = 278
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALRE--MQAKVEKEMGAVQD--------SS 95
+ EN + ++LE +K ++ +E+ G R +Q + E+E G V
Sbjct: 73 EQENLAECPVPDQELEAIKMKVCAMEQAEGTPRPPGVQHQAEEEEGTVARQLLSPETMGC 132
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
T EK E RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY
Sbjct: 133 PLPGTPEEKVEAXHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAY 192
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+EF +VQ A+ L+++ GR +KV KRTN PG+
Sbjct: 193 IEFATKRSVQAAVELDQSLFRGRVIKVLPKRTNFPGI 229
>gi|354544353|emb|CCE41076.1| hypothetical protein CPAR2_300650 [Candida parapsilosis]
Length = 217
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 93/145 (64%), Gaps = 13/145 (8%)
Query: 57 SKDLEDMKKRLKEIEEEAGALRE------MQAKVEKEMGAVQDSSSTSATQA--EKEEVD 108
++ LE ++RL+E++ L E + ++ + + S++ SA Q E+ + D
Sbjct: 36 AEQLEQEQRRLQELD---AVLHEQDHNTYTRPNLDASNTSARSSNAPSAEQLAEERRDSD 92
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
+RSIY+GNVDY TP E+Q+HF G VNRVTI+T+K GQPKGFAY+EF +++ V A+
Sbjct: 93 ARSIYIGNVDYQATPLELQEHFSPAGIVNRVTIMTNKITGQPKGFAYMEFSDVEGVNAAV 152
Query: 168 L-LNETELHGRQLKVSAKRTNIPGM 191
L+++ R+LKV KRTNIPG+
Sbjct: 153 KELDDSVFRDRRLKVLPKRTNIPGI 177
>gi|308479093|ref|XP_003101756.1| hypothetical protein CRE_12048 [Caenorhabditis remanei]
gi|308262666|gb|EFP06619.1| hypothetical protein CRE_12048 [Caenorhabditis remanei]
Length = 172
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 81/124 (65%), Gaps = 4/124 (3%)
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
E+E EA L+++Q K+ + M T T+ E++ +D++SI+VGNVDY T EE++Q
Sbjct: 4 EMEAEAKILKQIQTKLFESMNV---GKMTPPTEEEQKAIDAKSIFVGNVDYGATAEELEQ 60
Query: 129 HFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTN 187
HF CG + R TI DK + K FAYVEF +V++A+++N + GRQ+ V+AKRTN
Sbjct: 61 HFNGCGVIVRTTIPKDKMTKRQKNFAYVEFECAASVESAIVMNSSTFRGRQIVVTAKRTN 120
Query: 188 IPGM 191
PGM
Sbjct: 121 KPGM 124
>gi|17532829|ref|NP_495021.1| Protein EEED8.12 [Caenorhabditis elegans]
gi|2500592|sp|Q09301.1|YQOC_CAEEL RecName: Full=Putative RNA-binding protein EEED8.12
gi|351060993|emb|CCD68740.1| Protein EEED8.12 [Caenorhabditis elegans]
Length = 197
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 88/136 (64%), Gaps = 5/136 (3%)
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
EIE E+ L ++Q K+ K + + ++ T+ E++ +D++S+++GNVD+ T EEV++
Sbjct: 23 EIEAESAILEQIQNKMAKNL---ESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEVEE 79
Query: 129 HFQSCGTVNRVTILTDKFGQP-KGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTN 187
HF+ CG + R TI DKF + K FAY+EF + +++NAL++N + R + V+AKRTN
Sbjct: 80 HFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRTN 139
Query: 188 IPGMKQ-FRGRRPNTF 202
IPGM RG TF
Sbjct: 140 IPGMGHGVRGSSRGTF 155
>gi|402909310|ref|XP_003917365.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Papio anubis]
Length = 291
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 74/120 (61%), Gaps = 9/120 (7%)
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
T EK E D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY+EF
Sbjct: 149 GTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEF 208
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPGVPF 216
+VQ A+ L+++ GR +KV KRTN PG+ RG G RG P G PF
Sbjct: 209 ATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRG------GLRG-HPGSRGAPF 261
>gi|115533906|ref|NP_495022.2| Protein EEED8.4 [Caenorhabditis elegans]
gi|114152917|sp|Q09295.2|YQO4_CAEEL RecName: Full=Putative RNA-binding protein EEED8.4
gi|351060984|emb|CCD68731.1| Protein EEED8.4 [Caenorhabditis elegans]
Length = 191
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 89/136 (65%), Gaps = 5/136 (3%)
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
EIE E+ L+++Q K+ K + + ++ T+ E++ +D++S+++GNVD+ T EE+++
Sbjct: 17 EIEAESAILQQIQNKMAKHL---ESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEE 73
Query: 129 HFQSCGTVNRVTILTDKFGQP-KGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTN 187
HF+ CG + + TI DKF + K FAY+EF + +++NAL++N + R + V+AKRTN
Sbjct: 74 HFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRTN 133
Query: 188 IPGMKQ-FRGRRPNTF 202
IPGM RG TF
Sbjct: 134 IPGMGHGVRGSSRGTF 149
>gi|448522951|ref|XP_003868821.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis Co 90-125]
gi|380353161|emb|CCG25917.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis]
Length = 178
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A++EEVDSRSIYVGNVDY TPE++++ F G + RVTIL DK+ G PKG+AYVEF +I
Sbjct: 26 AKQEEVDSRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDKYSGLPKGYAYVEFEKI 85
Query: 161 DAVQNALL-LNETELHGRQLKVSAKRTNIPGMKQ 193
++V A+ L+ E GR+++V+ KRTN+PG ++
Sbjct: 86 ESVNKAVEDLHGKEFRGREVRVTPKRTNLPGFRK 119
>gi|297284777|ref|XP_001117810.2| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Macaca mulatta]
Length = 147
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
T EK E D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY+EF
Sbjct: 5 GTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEF 64
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+VQ A+ L+++ GR +KV KRTN PG+
Sbjct: 65 ATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGI 98
>gi|341890455|gb|EGT46390.1| hypothetical protein CAEBREN_09794 [Caenorhabditis brenneri]
Length = 188
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 92/136 (67%), Gaps = 6/136 (4%)
Query: 55 ANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYV 114
AN+ + ++K EI++E L+EMQ K+ +E+ + +T + E++E+D+RSI+V
Sbjct: 5 ANALNCTELKN---EIDQERLVLQEMQEKMAEELN--RSGKATPPSLEEQKEIDARSIFV 59
Query: 115 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLLNETE 173
GNVD+ T +E++ HF+ CG + R TI +KF Q K FAY+EF + ++V+ ALL++E+
Sbjct: 60 GNVDFGSTVDELEAHFKGCGVITRATIPKNKFSQRQKNFAYIEFEDKNSVEMALLMHESI 119
Query: 174 LHGRQLKVSAKRTNIP 189
R++ V+AKRTN+P
Sbjct: 120 FRDRKIVVTAKRTNVP 135
>gi|341895850|gb|EGT51785.1| hypothetical protein CAEBREN_00783 [Caenorhabditis brenneri]
Length = 186
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 92/137 (67%), Gaps = 6/137 (4%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIY 113
+AN+ + ++K EI++E L+EMQ K+ +++ + + + E++E+D+RSI+
Sbjct: 2 SANALNCTELKN---EIDQERLVLQEMQEKMAEQLN--RSGKAPPPSLDEQKEIDARSIF 56
Query: 114 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLLNET 172
VGNVD+ T +E++ HF+ CG + R TI DK+ Q K FAY+EF E ++V+ AL+++ET
Sbjct: 57 VGNVDFGSTVDELEAHFKGCGLITRTTIPKDKYSQRQKNFAYIEFEEKESVEMALIMHET 116
Query: 173 ELHGRQLKVSAKRTNIP 189
RQ+ V+AKRTN+P
Sbjct: 117 TFRDRQIVVTAKRTNVP 133
>gi|443922030|gb|ELU41543.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 203
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 81/134 (60%), Gaps = 11/134 (8%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDS-----SSTSATQAEKEEVDSRSIY 113
+LE MK R++E+E EA LR M A+ + G +S + E VD+RS+Y
Sbjct: 19 ELEQMKARVREMEAEAEKLRTMTAQAQPGSGPGSVGSGGGDASNEFGEESAEIVDARSVY 78
Query: 114 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQ----NALL 168
VGNVDY TPEE+Q HFQ+ GT+NR+TIL DKF G PKGF ++ F I + A +
Sbjct: 79 VGNVDYGATPEELQAHFQAVGTINRITILCDKFTGHPKGFVWI-FWFISGLDVETGTAEV 137
Query: 169 LNETELHGRQLKVS 182
LN++ GR +KVS
Sbjct: 138 LNDSLFRGRAIKVS 151
>gi|354465336|ref|XP_003495136.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 1
[Cricetulus griseus]
Length = 275
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 91/158 (57%), Gaps = 13/158 (8%)
Query: 46 DNENEEDPNANSKDLEDMKKRLKEIEEEAGALRE---MQAKVEKEMGA-VQDSSST---- 97
+ EN +++LE +K +L +E A L E +Q K +E GA V S
Sbjct: 70 EQENLAKSPGYNQELEAIKLKLWAMEH-AETLPEQPYVQRKATEEKGAEVGQLLSPEIMG 128
Query: 98 ---SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFA 153
T EK E D RS+YVGNVDY + E++ +F CG ++RVTIL DKF G PKG+A
Sbjct: 129 CFFPGTPKEKVEADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYA 188
Query: 154 YVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
Y+EF ++VQ A+ L+E+ GR +KV KRTN PG+
Sbjct: 189 YIEFASQNSVQAAVELDESTFRGRVIKVLPKRTNFPGI 226
>gi|296478138|tpg|DAA20253.1| TPA: ePABP2-like [Bos taurus]
Length = 272
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 77/127 (60%), Gaps = 12/127 (9%)
Query: 67 LKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEV 126
L E EE AGAL A Q S + + EK E D RSIYVGNVDY T +E+
Sbjct: 109 LDEGEEAAGALL-----------ARQLLSPETDSPLEKAEADHRSIYVGNVDYGGTAQEL 157
Query: 127 QQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
+ +F CG ++RVTIL DKF G PKG+AY+EF + Q A+ L+++ GR +KV KR
Sbjct: 158 EAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRVIKVLPKR 217
Query: 186 TNIPGMK 192
TN+PG+
Sbjct: 218 TNLPGIS 224
>gi|440908773|gb|ELR58758.1| Embryonic polyadenylate-binding protein 2, partial [Bos grunniens
mutus]
Length = 272
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 12/126 (9%)
Query: 67 LKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEV 126
L E EE AGAL A Q S + + EK E D RSIYVGNVDY T +E+
Sbjct: 109 LDEGEEAAGALL-----------ARQLLSPETDSPLEKAEADHRSIYVGNVDYGGTAQEL 157
Query: 127 QQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
+ +F CG ++RVTIL DKF G PKG+AY+EF + Q A+ L+++ GR +KV KR
Sbjct: 158 EAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRVIKVLPKR 217
Query: 186 TNIPGM 191
TN+PG+
Sbjct: 218 TNLPGI 223
>gi|209877356|ref|XP_002140120.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555726|gb|EEA05771.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 206
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
RSIY+GNVDY P E+Q+ F+SCG++NR+TI+ DK G PKGFAY+EF E +AV AL
Sbjct: 66 RSIYIGNVDYGTKPTELQELFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVDTALK 125
Query: 169 LNETELHGRQLKVSAKRTNIPGM 191
+ GRQ+KV +KR NIPG
Sbjct: 126 FDGAMFRGRQIKVCSKRKNIPGF 148
>gi|395856895|ref|XP_003800852.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Otolemur
garnettii]
Length = 274
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
EK E D RSIYVGNVDY T EE++ HF CG ++RVTIL DKF G PKG+AY+EF
Sbjct: 136 EKMEADHRSIYVGNVDYGGTAEELEAHFNCCGEIHRVTILCDKFSGHPKGYAYIEFATKS 195
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ Q A+ L+++ GR +KV KRTN PG+
Sbjct: 196 SAQAAVELDDSVFRGRVIKVLPKRTNFPGI 225
>gi|354465338|ref|XP_003495137.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 2
[Cricetulus griseus]
Length = 281
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
T EK E D RS+YVGNVDY + E++ +F CG ++RVTIL DKF G PKG+AY+EF
Sbjct: 139 GTPKEKVEADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEF 198
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
++VQ A+ L+E+ GR +KV KRTN PG+
Sbjct: 199 ASQNSVQAAVELDESTFRGRVIKVLPKRTNFPGI 232
>gi|67969697|dbj|BAE01197.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL D+F G PKGFAY+EF +
Sbjct: 5 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDEFSGHPKGFAYIEFSDKG 64
Query: 162 AVQN-ALLLNETELHGRQLKVSAKRTNIPGM 191
+ +L L+E+ G+++KV KRTN PG+
Sbjct: 65 VRRGPSLALDESLFRGKEIKVIPKRTNRPGI 95
>gi|426243462|ref|XP_004015574.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Ovis aries]
Length = 272
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 77/127 (60%), Gaps = 12/127 (9%)
Query: 67 LKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEV 126
L E EE AGAL A Q S + + EK E D RS+YVGNVDY T +E+
Sbjct: 109 LDEGEEAAGALL-----------ARQLLSPKTDSPLEKAEADHRSVYVGNVDYGGTAQEL 157
Query: 127 QQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
+ +F CG ++RVTIL DKF G PKG+AY+EF + Q A+ L+++ GR +KV KR
Sbjct: 158 EAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRVIKVLPKR 217
Query: 186 TNIPGMK 192
TN+PG+
Sbjct: 218 TNLPGIS 224
>gi|241952250|ref|XP_002418847.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223642186|emb|CAX44153.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 163
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A++EE+D RS+YVGNVDY TPE++++ F G + RVTIL D+F G PKG+AY+EF +
Sbjct: 20 AKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQT 79
Query: 161 DAVQNAL-LLNETELHGRQLKVSAKRTNIP 189
++VQ A+ L+ E GR+L+V+AKRTN+P
Sbjct: 80 ESVQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|68482858|ref|XP_714655.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|46436241|gb|EAK95607.1| hypothetical protein CaO19.8967 [Candida albicans SC5314]
gi|238883823|gb|EEQ47461.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 163
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A++EE+D RS+YVGNVDY TPE++++ F G + RVTIL D+F G PKG+AY+EF +
Sbjct: 20 AKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQT 79
Query: 161 DAVQNAL-LLNETELHGRQLKVSAKRTNIP 189
++VQ A+ L+ E GR+L+V+AKRTN+P
Sbjct: 80 ESVQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|308459109|ref|XP_003091880.1| hypothetical protein CRE_30217 [Caenorhabditis remanei]
gi|308254860|gb|EFO98812.1| hypothetical protein CRE_30217 [Caenorhabditis remanei]
Length = 205
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
EIE EA LR++Q ++ + M + + T+ E++ +D+RS++VGNVD+ T EE++
Sbjct: 38 EIEAEAKVLRDIQNRLSESM---EIGKTVPPTEEEQKAIDARSVFVGNVDFGSTIEELEA 94
Query: 129 HFQSCGTVNRVTILTDKFGQP-KGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTN 187
HF+ CG + R+TI DK + K FAYVEF +V+NA+++N + RQ+ V+AKRTN
Sbjct: 95 HFKGCGEIVRITIPKDKLTKKQKNFAYVEFESSASVENAMVMNGSAFRERQIVVTAKRTN 154
Query: 188 IPGM 191
PGM
Sbjct: 155 KPGM 158
>gi|302659609|ref|XP_003021492.1| small subunit of nuclear cap-binding protein complex [Trichophyton
verrucosum HKI 0517]
gi|291185395|gb|EFE40874.1| small subunit of nuclear cap-binding protein complex [Trichophyton
verrucosum HKI 0517]
Length = 126
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 75/106 (70%), Gaps = 10/106 (9%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
+N+E + +++ M++RL ++E EA L EMQA ++++ T + +KE++
Sbjct: 14 DNQEKAGDDEEEIAAMRERLTKMESEAAKLHEMQASLDQQ---------TENLREDKEDI 64
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF 152
D+RSI+VGNVDYA +PEE+Q HFQSCG++NRVTIL DKF G PKGF
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGF 110
>gi|68483054|ref|XP_714561.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
gi|46436140|gb|EAK95508.1| hypothetical protein CaO19.1389 [Candida albicans SC5314]
Length = 163
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A++EE+D RS+YVGNVDY TPE++++ F G + RVTIL D+F G PKG+AY+EF +
Sbjct: 20 AKQEEIDGRSVYVGNVDYQSTPEQLEEFFHGVGVIERVTILFDRFSGLPKGYAYIEFEQT 79
Query: 161 DAVQNAL-LLNETELHGRQLKVSAKRTNIP 189
++VQ A+ L+ E GR+L+V+AKRTN+P
Sbjct: 80 ESVQKAIDELHGKEFRGRELRVTAKRTNLP 109
>gi|348550266|ref|XP_003460953.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Cavia
porcellus]
Length = 273
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQ 164
E D RSIYVGNVDY T EE++ HF CG V+RVTIL DKF G PKG+AYVEF + Q
Sbjct: 138 EADHRSIYVGNVDYGGTAEELEAHFHRCGEVHRVTILCDKFSGHPKGYAYVEFATQRSAQ 197
Query: 165 NALLLNETELHGRQLKVSAKRTNIPGM 191
A+ L+E+ GR LKV KRTN PG+
Sbjct: 198 AAVELDESIFRGRALKVLPKRTNFPGI 224
>gi|326482748|gb|EGE06758.1| RNP domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 122
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 75/106 (70%), Gaps = 10/106 (9%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
+N+E + +++ M++RL ++E EA L EMQA ++++ T + +KE++
Sbjct: 14 DNQEKAGDDEEEIAAMRERLTKMESEAAKLHEMQASLDQQ---------TENLREDKEDI 64
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF 152
D+RSI+VGNVDYA +PEE+Q HFQSCG++NRVTIL DKF G PKGF
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGF 110
>gi|66475216|ref|XP_627424.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
gi|46228897|gb|EAK89746.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
Length = 262
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVE 159
A+ EE+ RSIY+GNVDY E+Q F+SCG++NR+TI+ DK G PKGFAY+EF E
Sbjct: 102 SADDEEM-KRSIYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTGMPKGFAYLEFCE 160
Query: 160 IDAVQNALLLNETELHGRQLKVSAKRTNIPG 190
+AV+ AL + GRQ+KVS KR NIPG
Sbjct: 161 PEAVETALKFDGAMFRGRQIKVSTKRKNIPG 191
>gi|308459121|ref|XP_003091886.1| hypothetical protein CRE_30229 [Caenorhabditis remanei]
gi|308254866|gb|EFO98818.1| hypothetical protein CRE_30229 [Caenorhabditis remanei]
Length = 183
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 84/124 (67%), Gaps = 6/124 (4%)
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
E+E EA L+++Q K+ ++MG + T T+ E++ +D++S+++GNV+Y T EE++Q
Sbjct: 17 ELEAEAVVLKQIQNKLSEKMGMM-----TPPTEEEQKAIDAKSVFIGNVEYGATIEELEQ 71
Query: 129 HFQSCGTVNRVTILTDKFGQP-KGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTN 187
HF+ CGT+ R TI DK + K FAY+EF +V NA+++N + R++ V++KRTN
Sbjct: 72 HFKGCGTIVRTTIPKDKVTKKQKNFAYIEFESSASVDNAIVMNGSIFRDRKIVVTSKRTN 131
Query: 188 IPGM 191
PGM
Sbjct: 132 KPGM 135
>gi|67592644|ref|XP_665658.1| poly(A) binding protein II [Cryptosporidium hominis TU502]
gi|54656446|gb|EAL35428.1| poly(A) binding protein II [Cryptosporidium hominis]
Length = 263
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVE 159
A+ EE+ RSIY+GNVDY E+Q F+SCG++NR+TI+ DK G PKGFAY+EF E
Sbjct: 103 SADDEEM-KRSIYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTGMPKGFAYLEFCE 161
Query: 160 IDAVQNALLLNETELHGRQLKVSAKRTNIPG 190
+AV+ AL + GRQ+KVS KR NIPG
Sbjct: 162 PEAVETALKFDGAMFRGRQIKVSTKRKNIPG 192
>gi|126136038|ref|XP_001384543.1| hypothetical protein PICST_45495 [Scheffersomyces stipitis CBS
6054]
gi|126091741|gb|ABN66514.1| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 155
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVE 156
+A A++EE+D RSIYVGNVDY TPE++++ F G + RVTIL D++ G PKG+AYVE
Sbjct: 22 AARLAKQEEIDGRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRYSGLPKGYAYVE 81
Query: 157 FVEIDAVQNALL-LNETELHGRQLKVSAKRTNIP 189
F + ++V+ A+ L+ E GR+++VSAKRTN+P
Sbjct: 82 FEKTESVERAIEDLHGKEFRGREIRVSAKRTNLP 115
>gi|166157542|ref|NP_001107251.1| embryonic polyadenylate-binding protein 2 [Rattus norvegicus]
gi|205716473|sp|B0BNE4.1|EPAB2_RAT RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|165970991|gb|AAI58790.1| Pabpnl1 protein [Rattus norvegicus]
Length = 269
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
E E D RS+YVGNVDY + E++ +F CG ++RVTIL DKF G PKG+AY+EF
Sbjct: 132 ENVEADHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKS 191
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+VQ A+ L+E+ GR +KV KRTN PG+
Sbjct: 192 SVQAAVRLDESTFRGRVIKVLPKRTNFPGI 221
>gi|149038404|gb|EDL92764.1| similar to embryonic pol(yA) binding protein 2 (predicted) [Rattus
norvegicus]
Length = 284
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
E E D RS+YVGNVDY + E++ +F CG ++RVTIL DKF G PKG+AY+EF
Sbjct: 147 ENVEADHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKS 206
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+VQ A+ L+E+ GR +KV KRTN PG+
Sbjct: 207 SVQAAVRLDESTFRGRVIKVLPKRTNFPGI 236
>gi|385302465|gb|EIF46595.1| polyadenylate-binding protein 2 [Dekkera bruxellensis AWRI1499]
Length = 234
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQ 164
E+D RS+YVGN+DY+ T ++++ CG +NR+TIL + + G+ KGFAYVEF +++ +
Sbjct: 78 EIDRRSVYVGNIDYSATTADLKKVLDDCGEINRITILYNHYTGRSKGFAYVEFNDVEGAK 137
Query: 165 NALLLNETELHGRQLKVSAKRTNIPGM 191
A+ LN TEL+ R L + KRTNIPGM
Sbjct: 138 AAIELNGTELYSRALTIQQKRTNIPGM 164
>gi|320582005|gb|EFW96224.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Ogataea parapolymorpha DL-1]
Length = 156
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
+ ++E+DSRS+Y+GNVDY+ P ++++ CG +NR+TIL DK G+P+G+A+VEF
Sbjct: 19 SNQQEIDSRSVYLGNVDYSALPGDLKELLDDCGVINRITILYDKHTGKPRGYAFVEFETH 78
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFR 195
+ Q A+ +N TE GR L V+ KRTN PG+ R
Sbjct: 79 EGAQKAVAMNGTEFRGRTLTVTPKRTNYPGITNAR 113
>gi|302503907|ref|XP_003013913.1| small subunit of nuclear cap-binding protein complex [Arthroderma
benhamiae CBS 112371]
gi|291177479|gb|EFE33273.1| small subunit of nuclear cap-binding protein complex [Arthroderma
benhamiae CBS 112371]
Length = 303
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 74/105 (70%), Gaps = 10/105 (9%)
Query: 48 ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
+N+E + +++ M++RL ++E EA L EMQA ++++ T + +KE++
Sbjct: 14 DNQEKAGDDEEEIAAMRERLTKMESEAAKLHEMQASLDQQ---------TENLREDKEDI 64
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKG 151
D+RSI+VGNVDYA +PEE+Q HFQSCG++NRVTIL DKF G PKG
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKG 109
>gi|296474988|tpg|DAA17103.1| TPA: ePABP2-like [Bos taurus]
Length = 271
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 12/129 (9%)
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
+ L E EE GAL A Q S + + EK E D RSIYVGNVDY T +
Sbjct: 106 QNLDEGEEATGALL-----------ARQLLSPETDSPLEKAEADHRSIYVGNVDYGGTAQ 154
Query: 125 EVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
E++ +F CG +++VTIL DKF G PKG+AY+EF + Q A+ L+++ GR +KV
Sbjct: 155 ELEAYFNHCGEIHQVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRVIKVLP 214
Query: 184 KRTNIPGMK 192
KRTN+PG+
Sbjct: 215 KRTNLPGIS 223
>gi|50307397|ref|XP_453677.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642811|emb|CAH00773.1| KLLA0D13772p [Kluyveromyces lactis]
Length = 345
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQ 164
E+DSRSI+VGN+ T E +++HF+ CG V RVTIL +K G PKG+AY+EF D++
Sbjct: 99 ELDSRSIFVGNITTEATAETLEEHFKDCGEVVRVTILYNKLTGAPKGYAYIEFESSDSIP 158
Query: 165 NALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRP 199
AL L ++ELHG + V+ KRTN+PG + P
Sbjct: 159 KALELKDSELHGETINVAKKRTNVPGYNNNKNYYP 193
>gi|365760126|gb|EHN01868.1| Sgn1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 250
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Query: 77 LREMQAKVEKEMGAVQDSSSTSATQ--AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCG 134
L E+ K+ E GA Q S S + A + E DSRSI+VGN+ TPE++++HFQ CG
Sbjct: 30 LDELVGKLSIE-GAPQVSQKLSKEEKHAHQLEADSRSIFVGNITLDVTPEQIEEHFQDCG 88
Query: 135 TVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ R+T+L D+ G PKG+ Y+EF + AL LN EL+G+++ VS KRTNIPG
Sbjct: 89 LIKRITLLYDRNTGAPKGYGYIEFESPAFREKALQLNGVELNGKKIAVSRKRTNIPGF 146
>gi|401842846|gb|EJT44882.1| SGN1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 250
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Query: 77 LREMQAKVEKEMGAVQDSSSTSATQ--AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCG 134
L E+ K+ E GA Q S S + A + E DSRSI+VGN+ TPE++++HFQ CG
Sbjct: 30 LDELVGKLSIE-GAPQVSQKLSKEEKHAHQLEADSRSIFVGNITLDVTPEQIEEHFQDCG 88
Query: 135 TVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ R+T+L D+ G PKG+ Y+EF + AL LN EL+G+++ VS KRTNIPG
Sbjct: 89 LIKRITLLYDRNTGAPKGYGYIEFESPAFREKALQLNGVELNGKKIAVSRKRTNIPGF 146
>gi|254581722|ref|XP_002496846.1| ZYRO0D09482p [Zygosaccharomyces rouxii]
gi|238939738|emb|CAR27913.1| ZYRO0D09482p [Zygosaccharomyces rouxii]
Length = 289
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 15/127 (11%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQ 164
E D+RSI+VGN+ TPE +++HF CG + R+T+L DK G PKG+AYV+F + +
Sbjct: 78 EADARSIFVGNISPDVTPEIIEEHFAECGEIKRITLLHDKHTGVPKGYAYVQFESSEVQE 137
Query: 165 NALLLNETELHGRQLKVSAKRTNIPGMKQFRGRR-----PNTFG--------FRGRRPFI 211
NAL LN TEL G ++ V KRTN+PG ++ + PN +G F+G F
Sbjct: 138 NALKLNGTELKGNKINVYKKRTNLPGYHRYSQDQRPVYYPNQWGYTYTGFPDFKGMN-FF 196
Query: 212 PGVPFVP 218
P PF P
Sbjct: 197 PPYPFQP 203
>gi|406607797|emb|CCH40902.1| Embryonic polyadenylate-binding protein 2 [Wickerhamomyces
ciferrii]
Length = 228
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDA 162
++E DSRS+Y+GNVDY TPEE+++ F GT+NRVTIL D+F G+PKG+AYVEF +
Sbjct: 66 QKETDSRSVYIGNVDYNTTPEELEEFFSKIGTINRVTILFDRFTGRPKGYAYVEFESQSS 125
Query: 163 VQNALLLNETELHGRQLKVSAKRTNIP 189
V +A+ L+ E R + V+ KRTN+P
Sbjct: 126 VDSAIGLSGQEFKDRIISVNIKRTNVP 152
>gi|148679749|gb|EDL11696.1| poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 288
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVE 156
S T E E D RS++VGNVDY + E++ +F CG ++RVTIL DKF G PKG+AY+E
Sbjct: 146 SRTSKENVEADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIE 205
Query: 157 FVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
F +V+ A+ L+E+ GR +KV KRTN PG+
Sbjct: 206 FASHRSVKAAVGLDESTFRGRVIKVLPKRTNFPGI 240
>gi|55925591|ref|NP_001007463.1| embryonic polyadenylate-binding protein 2 [Mus musculus]
gi|81910338|sp|Q5XFR0.1|EPAB2_MOUSE RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|54111431|tpg|DAA02003.1| TPA_exp: embryonic poly(A) binding protein 2 [Mus musculus]
gi|223461244|gb|AAI41318.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
gi|223461425|gb|AAI41317.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 273
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVE 156
S T E E D RS++VGNVDY + E++ +F CG ++RVTIL DKF G PKG+AY+E
Sbjct: 131 SRTSKENVEADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIE 190
Query: 157 FVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
F +V+ A+ L+E+ GR +KV KRTN PG+
Sbjct: 191 FASHRSVKAAVGLDESTFRGRVIKVLPKRTNFPGI 225
>gi|71993551|ref|NP_500666.2| Protein T08B6.5 [Caenorhabditis elegans]
gi|373220496|emb|CCD73994.1| Protein T08B6.5 [Caenorhabditis elegans]
Length = 177
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
T E+E+ D+RS+YVGNVD+ T E+++HF CG V RVTI DKF G K FA+VEF
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
++++VQ AL+L+ T R++ V+ KRTN PGM
Sbjct: 96 KLESVQLALVLSGTMFRNRKIMVTLKRTNKPGM 128
>gi|219519920|gb|AAI45635.1| Pabpnl1 protein [Mus musculus]
Length = 288
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVE 156
S T E E D RS++VGNVDY + E++ +F CG ++RVTIL DKF G PKG+AY+E
Sbjct: 146 SRTSKENVEADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIE 205
Query: 157 FVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
F +V+ A+ L+E+ GR +KV KRTN PG+
Sbjct: 206 FASHRSVKAAVGLDESTFRGRVIKVLPKRTNFPGI 240
>gi|50414059|ref|XP_457358.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
gi|49653023|emb|CAG85362.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
Length = 190
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A++EE+DSRS+YVGNVDY TPE+++ F++ G + R+TIL DK+ G PKG+AYVEF
Sbjct: 46 AKQEEIDSRSVYVGNVDYQSTPEQLESFFKAVGVIERITILFDKYSGLPKGYAYVEFEIP 105
Query: 161 DAVQNAL-LLNETELHGRQLKVSAKRTNIP 189
++V+ A+ L+ E GR L+V+ KRTN+P
Sbjct: 106 ESVEKAIEELHGKEFRGRDLRVTPKRTNLP 135
>gi|335289034|ref|XP_003126854.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 93/178 (52%), Gaps = 27/178 (15%)
Query: 58 KDLEDMKKRLKEIEE--------------EAGALREMQAKVEKEMGAVQDS---SSTSAT 100
++LE ++ +L +E+ +AGAL Q + E G Q + S
Sbjct: 84 QELEAIRLKLWAMEQAQGPEPQPQQQEEEDAGALLAGQL-LSPEAGRSQRARPGPSLGGW 142
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVE 159
+K E D RS+YVGNVDY T E++ +F CG ++RVTIL DKF G PKG+AY+EF
Sbjct: 143 PQQKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFAT 202
Query: 160 IDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPGVPF 216
+ Q A+ L+ + GR +KV KRTN PG+ RG G RG P G PF
Sbjct: 203 ESSAQAAVELDNSVFRGRVIKVLPKRTNFPGISSTDRG------GLRG-HPSARGRPF 253
>gi|431838574|gb|ELK00506.1| Embryonic polyadenylate-binding protein 2 [Pteropus alecto]
Length = 308
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 81/136 (59%), Gaps = 12/136 (8%)
Query: 58 KDLEDMKKRLKEIEEEAG-------ALREMQ----AKVEKEMGAVQDSSSTSATQAEKEE 106
++LE +K +L +E+ G AL E + A + +++ + + T EK E
Sbjct: 123 QELESIKLKLWAMEQAQGPEPPRAQALAEKEESSGAMLAQQLLSPETGRPYPGTPVEKME 182
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQN 165
VD RSIYVGNVDY T +E++ +F CG V RVTIL DKF G PKG+AYVEF +VQ
Sbjct: 183 VDHRSIYVGNVDYGGTAKELEAYFNHCGEVQRVTILCDKFSGHPKGYAYVEFASESSVQA 242
Query: 166 ALLLNETELHGRQLKV 181
A+ L+E+ GR +KV
Sbjct: 243 AVELDESIFRGRVIKV 258
>gi|238605300|ref|XP_002396414.1| hypothetical protein MPER_03357 [Moniliophthora perniciosa FA553]
gi|215468958|gb|EEB97344.1| hypothetical protein MPER_03357 [Moniliophthora perniciosa FA553]
Length = 216
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 76/130 (58%), Gaps = 16/130 (12%)
Query: 77 LREMQAKVE-KEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGT 135
++QA E + GA + + T +K D+RSIYVGN PE++Q HF +CGT
Sbjct: 49 FAQLQAAAEVNQHGASSGAGTPMETDEDKTGADNRSIYVGNTTVR-HPEDIQGHFSACGT 107
Query: 136 VNRVTILTDKF-GQPKG----------FAYVEFVEIDAVQNALLLNETELHGRQLK---V 181
+NRVTIL DKF G PKG +AYVEF E + V AL ++ + HGR +K V
Sbjct: 108 INRVTILCDKFTGHPKGNSITEMFSKRYAYVEFAEPEHVDTALTMDNSLFHGRLIKVQPV 167
Query: 182 SAKRTNIPGM 191
+AKRTN+PG
Sbjct: 168 TAKRTNVPGF 177
>gi|255725524|ref|XP_002547691.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
gi|240135582|gb|EER35136.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
Length = 137
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF-VEID 161
++E+D+RS+YVGNVDY TPE++++ F G + RVTIL D+F G PKG+AY+EF E
Sbjct: 23 QQEIDNRSVYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDRFSGLPKGYAYIEFETEES 82
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPGM 191
AV+ L+ E GR L++S KRTN+PG
Sbjct: 83 AVKAIEELDGKEFKGRALRISKKRTNLPGF 112
>gi|149240135|ref|XP_001525943.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450066|gb|EDK44322.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 224
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 66/94 (70%), Gaps = 2/94 (2%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A++EE D RS+YVGNVDY TPE++++ F G V RVTIL DKF G PKG+AYVEF
Sbjct: 58 AKQEETDLRSVYVGNVDYQSTPEQIEELFHKVGIVERVTILFDKFSGLPKGYAYVEFQTP 117
Query: 161 DAVQNAL-LLNETELHGRQLKVSAKRTNIPGMKQ 193
+ + A+ L+ GR+L+VS KRTN+PG ++
Sbjct: 118 ENAKKAVEELHGESFRGRELRVSEKRTNLPGFRK 151
>gi|355672297|gb|AER95015.1| BCL2-like 2 [Mustela putorius furo]
Length = 216
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 9/121 (7%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTSATQAEKEEV 107
EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++ + EK E
Sbjct: 100 EDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEA 154
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +
Sbjct: 155 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTS 214
Query: 167 L 167
L
Sbjct: 215 L 215
>gi|344228071|gb|EGV59957.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 242
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDA 162
+EEVDSRS+YVGNV++ TP ++++ F S G + R+TIL D+F G PKG+AY+EF +
Sbjct: 56 QEEVDSRSVYVGNVNFTSTPVQLEEFFHSVGVIERITILFDRFTGIPKGYAYIEFNSEEG 115
Query: 163 VQNALL-LNETELHGRQLKVSAKRTNIPGMKQ 193
Q A+ L+ R+LKV+AKRTN PGM +
Sbjct: 116 AQKAISELDGKVFRNRELKVTAKRTNFPGMSR 147
>gi|149234716|ref|XP_001523237.1| hypothetical protein LELG_05463 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453026|gb|EDK47282.1| hypothetical protein LELG_05463 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 334
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDA 162
K E D++SIY+GNVDY TP E+QQHF CG + +VTIL +KF G+PKG AY+ F + ++
Sbjct: 180 KRESDAKSIYIGNVDYGSTPLELQQHFSLCGIIEKVTILNNKFTGRPKGVAYLAFQDQES 239
Query: 163 VQNAL-LLNETELHGRQLKVSAKRTNIPGM 191
V A+ L+ + R+LKV KRTNIPG+
Sbjct: 240 VDKAIATLDGSIFRDRELKVMHKRTNIPGI 269
>gi|367017760|ref|XP_003683378.1| hypothetical protein TDEL_0H03080 [Torulaspora delbrueckii]
gi|359751042|emb|CCE94167.1| hypothetical protein TDEL_0H03080 [Torulaspora delbrueckii]
Length = 275
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
A + E DSRSI+VGN+ TPE + +HF+ CG + R+T+L DK G PKG+AYVEF
Sbjct: 69 AAQVEADSRSIFVGNITPEITPEIIDEHFKDCGVIERITLLYDKNTGAPKGYAYVEFENA 128
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGM---KQFRGRRPN 200
DA + AL N +EL G ++ V KRTN+PG QF +RPN
Sbjct: 129 DAQEKALEHNGSELKGGKISVYKKRTNLPGYHRHAQF--QRPN 169
>gi|297284668|ref|XP_001100533.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Macaca
mulatta]
Length = 322
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
T EK E D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY+EF
Sbjct: 150 TPEEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEFA 209
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+VQ A+ L+++ GR +KV PG+
Sbjct: 210 TKGSVQAAVELDQSLFRGRVIKVRQCSPGAPGV 242
>gi|268536758|ref|XP_002633514.1| Hypothetical protein CBG05376 [Caenorhabditis briggsae]
Length = 182
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP-KGFAYVEFV 158
T E++E+DSRS+++GNVD+ + E++++HF+ CG + R TI DKF + K FAY+EF
Sbjct: 43 TAEEQKEIDSRSVFIGNVDFGSSIEDIEEHFKGCGEIIRTTIPKDKFTKKQKNFAYIEFA 102
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
++++NAL++N + RQ+ V+AKRTN P
Sbjct: 103 SAESIENALVMNGSLFRSRQIVVTAKRTNKP 133
>gi|268536756|ref|XP_002633513.1| Hypothetical protein CBG05375 [Caenorhabditis briggsae]
Length = 180
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP-KGFAYVEFV 158
T E++E+DSRS+++GNVD+ + E++++HF+ CG + R TI DKF + K FAY+EF
Sbjct: 44 TAEEQKEIDSRSVFIGNVDFGSSIEDIEEHFKGCGEIIRTTIPKDKFTKKQKNFAYIEFA 103
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
++++NAL++N + RQ+ V+AKRTN P
Sbjct: 104 SAESIENALVMNGSLFRSRQIVVTAKRTNKP 134
>gi|323333070|gb|EGA74471.1| Sgn1p [Saccharomyces cerevisiae AWRI796]
Length = 250
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
A + E DSRSI+VGN+ TPE+++ HF+ CG + R+T+L D+ G PKG+ Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ AL LN EL G+++ VS KRTNIPG
Sbjct: 116 AYREKALQLNGGELKGKKIAVSRKRTNIPGF 146
>gi|350585423|ref|XP_003356120.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 91/178 (51%), Gaps = 27/178 (15%)
Query: 58 KDLEDMKKRLKEIEE--------------EAGALREMQAKVEKEMGAVQDS---SSTSAT 100
++LE ++ +L +E+ +AGAL Q + E G Q + S
Sbjct: 84 QELEAIRLKLWAMEQAQGPEPQPQQQEEEDAGALLAGQL-LSPEAGRSQRARPGPSLGGW 142
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVE 159
+K E D RS+YVGNVDY T E++ +F CG ++RVTIL DKF G PKG+AY+EF
Sbjct: 143 PQQKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFAT 202
Query: 160 IDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTFGFRGRRPFIPGVPF 216
+ Q + L+ + G +KV KRTN PG+ RG G RG P G PF
Sbjct: 203 ESSAQAPVELDNSVFRGPVIKVLPKRTNFPGISSTDRG------GLRG-HPSARGRPF 253
>gi|256274155|gb|EEU09065.1| Sgn1p [Saccharomyces cerevisiae JAY291]
gi|259147260|emb|CAY80513.1| Sgn1p [Saccharomyces cerevisiae EC1118]
gi|323348162|gb|EGA82416.1| Sgn1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 250
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
A + E DSRSI+VGN+ TPE+++ HF+ CG + R+T+L D+ G PKG+ Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ AL LN EL G+++ VS KRTNIPG
Sbjct: 116 AYREKALQLNGGELKGKKIAVSRKRTNIPGF 146
>gi|6322191|ref|NP_012266.1| Sgn1p [Saccharomyces cerevisiae S288c]
gi|731904|sp|P40561.1|SGN1_YEAST RecName: Full=RNA-binding protein SGN1
gi|557850|emb|CAA86203.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151943159|gb|EDN61494.1| cytoplasmic RNA-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406222|gb|EDV09489.1| RNA-binding protein SGN1 [Saccharomyces cerevisiae RM11-1a]
gi|285812648|tpg|DAA08547.1| TPA: Sgn1p [Saccharomyces cerevisiae S288c]
gi|346228212|gb|AEO21089.1| SGN1 [synthetic construct]
gi|349578952|dbj|GAA24116.1| K7_Sgn1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298723|gb|EIW09819.1| Sgn1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 250
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
A + E DSRSI+VGN+ TPE+++ HF+ CG + R+T+L D+ G PKG+ Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ AL LN EL G+++ VS KRTNIPG
Sbjct: 116 AYREKALQLNGGELKGKKIAVSRKRTNIPGF 146
>gi|308456423|ref|XP_003090653.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
gi|308261964|gb|EFP05917.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
Length = 183
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 10/141 (7%)
Query: 52 DPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS 111
D N+N +E+ E++ EA L+++Q K+ + M + T T+ E++ +D++S
Sbjct: 5 DNNSNFCSMEE------ELQAEARVLKQIQTKLSETM---ETGKKTLPTEEEQKSIDAKS 55
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLN 170
I+VGNVD+ T E++ HF CG + R I +K + K FAY+EF D +NA+++N
Sbjct: 56 IFVGNVDFGATVAELEAHFYGCGQIVRTRIPKNKMTNRQKNFAYIEFECADNAENAMVMN 115
Query: 171 ETELHGRQLKVSAKRTNIPGM 191
+ GR + V+ KRTN PGM
Sbjct: 116 GSTFRGRPIVVTTKRTNKPGM 136
>gi|308459113|ref|XP_003091882.1| hypothetical protein CRE_30214 [Caenorhabditis remanei]
gi|308254862|gb|EFO98814.1| hypothetical protein CRE_30214 [Caenorhabditis remanei]
Length = 186
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 80/124 (64%), Gaps = 8/124 (6%)
Query: 69 EIEEEAGALREMQAKV--EKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEV 126
E++ EA L+++Q ++ + EMG V T+ E++ +D++SI+VGNV+Y T EE+
Sbjct: 16 ELQAEAVVLKQIQNRLAAKMEMGKV-----CLPTEEEQKVIDAKSIFVGNVEYGATTEEL 70
Query: 127 QQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
+ HF+ CG + R TI DK + K FAYVEF +V+NA+L+N + GR + V+AKR
Sbjct: 71 EDHFKGCGEIVRTTIPKDKMTNRQKNFAYVEFECAASVENAILMNGSTFRGRPIVVTAKR 130
Query: 186 TNIP 189
TN P
Sbjct: 131 TNKP 134
>gi|260784963|ref|XP_002587533.1| hypothetical protein BRAFLDRAFT_237106 [Branchiostoma floridae]
gi|229272681|gb|EEN43544.1| hypothetical protein BRAFLDRAFT_237106 [Branchiostoma floridae]
Length = 100
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY T EE++ HF CG++NRVTIL DKF G PKGFAY+EF + D+++ A L+++
Sbjct: 1 VDYGATAEELEAHFHGCGSINRVTILCDKFTGHPKGFAYIEFADKDSIETAKALDDSLFR 60
Query: 176 GRQLKVSAKRTNIPGM 191
GRQ+KV KRTN PG+
Sbjct: 61 GRQIKVVPKRTNRPGV 76
>gi|308459099|ref|XP_003091875.1| hypothetical protein CRE_30220 [Caenorhabditis remanei]
gi|308254855|gb|EFO98807.1| hypothetical protein CRE_30220 [Caenorhabditis remanei]
Length = 188
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 79/117 (67%), Gaps = 4/117 (3%)
Query: 76 ALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGT 135
L+++Q ++ ++M + + T+ E++E+D+RSI++GNV++ T EE++ HF+ CG
Sbjct: 24 VLKQIQNRLAEKM---EVGKTAPPTEEEQKEIDARSIFIGNVEFGATVEELEDHFKGCGE 80
Query: 136 VNRVTILTDKFGQP-KGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
+ R TI DK + K +A++EF D+V+NA+++N + RQ+ V++KRTN PGM
Sbjct: 81 IVRTTIPKDKLTKKQKNYAFIEFESSDSVENAMVMNGSTFRERQIVVTSKRTNKPGM 137
>gi|355710480|gb|EHH31944.1| hypothetical protein EGK_13114 [Macaca mulatta]
Length = 241
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 4/93 (4%)
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
T EK E D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG+AY+EF
Sbjct: 149 GTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEF 208
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIPG 190
+VQ A+ L+++ GR +KV R PG
Sbjct: 209 ATKGSVQAAVELDQSLFRGRVIKV---RQCSPG 238
>gi|146421021|ref|XP_001486462.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
gi|146389877|gb|EDK38035.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
Length = 159
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 67/97 (69%), Gaps = 10/97 (10%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEID 161
++EE+D RSIYVGNV+Y TP ++++ F + GTV RVTIL D++ G KGFAY+EF +
Sbjct: 32 KQEEIDQRSIYVGNVEYLSTPGQLEEFFSAVGTVERVTILFDRYSGLSKGFAYIEFDTTE 91
Query: 162 AVQNALLLNETELHG-----RQLKVSAKRTNIPGMKQ 193
A + A+ ELHG R+L++S KR N+PG ++
Sbjct: 92 AAERAI----EELHGKKFNERELRISPKRINLPGFRK 124
>gi|428173619|gb|EKX42520.1| hypothetical protein GUITHDRAFT_88058 [Guillardia theta CCMP2712]
Length = 213
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 16/146 (10%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAV-----------QDSSSTSATQAEKEEV 107
+L M+K L + E++ L K+ K+ G+ +DS ++A A++ E
Sbjct: 33 ELAQMQKELAKAEQQKAELD----KLNKQQGSGSAGSADGKSGGEDSELSAAAAADQAER 88
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
DSRSI++GNVD+A + EEVQ F CG +N +TI DKF G+ KGFAY+EF + +V A
Sbjct: 89 DSRSIFIGNVDFAASVEEVQALFADCGEINAITIPVDKFTGRAKGFAYLEFADKASVLMA 148
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMK 192
+ N L R +KV KRTN+P +
Sbjct: 149 MEKNNALLRDRAIKVVNKRTNLPSWQ 174
>gi|403357954|gb|EJY78612.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403360696|gb|EJY80032.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403365989|gb|EJY82785.1| RNA-binding protein, putative [Oxytricha trifallax]
gi|403375247|gb|EJY87595.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 183
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG-QPKGFAYVEFV 158
++ ++E+ D RS++V NVDY+ P E++ HF+ CG V RVTI DK QPKG A++EF
Sbjct: 53 SKEDQEDADERSVFVKNVDYSAEPAELKDHFKECGEVKRVTIPVDKASQQPKGHAFIEFT 112
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
I+A Q A L ++ GRQ+ V KR NIP
Sbjct: 113 TIEAAQKAKRLTDSLFKGRQITVIPKRKNIP 143
>gi|157872658|ref|XP_001684864.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68127934|emb|CAJ06567.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 216
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 6/150 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+LE+MK+++ ++E+ L+ +Q K+ G + +++ +AT + + + SI+VG++D
Sbjct: 28 ELEEMKRQVDSLQEDM-QLKALQESAAKDEGTRKTAAAAAATSGQSKT--NTSIFVGDLD 84
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
T +++ F SCG + RVT+L D+ G PKG AYVEF A+L + LHG+
Sbjct: 85 LRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILKDGQSLHGKP 144
Query: 179 LKVSAKRTNIPGMKQFRG-RRPNTFGFRGR 207
LKV+ KR NIP + RG R + RGR
Sbjct: 145 LKVAMKRDNIPAFQ--RGISRGGAYALRGR 172
>gi|326427875|gb|EGD73445.1| hypothetical protein PTSG_05149 [Salpingoeca sp. ATCC 50818]
Length = 242
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 58/92 (63%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF 157
+ +Q +EE D RS++V NVDY + ++Q F+ CG V R+TI GQPKGFAYVEF
Sbjct: 109 TGSQESREEADRRSVFVQNVDYGTSEVDLQLFFKDCGPVRRITIGRGPTGQPKGFAYVEF 168
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
+ AV+ A L L GRQ+ V KRTN+P
Sbjct: 169 TDEAAVETAKGLTNQMLKGRQVTVLNKRTNVP 200
>gi|351712927|gb|EHB15846.1| Embryonic polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 308
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 79/171 (46%), Gaps = 36/171 (21%)
Query: 58 KDLEDMKKRLKEIEEEAGA----------LREMQAKVEKEMGAVQDSSSTSATQAEKEEV 107
+ LE +K +L +E+ GA E A+ + + E E
Sbjct: 93 QGLEAIKLKLWTMEQAQGAPEPPSKQELATEEEGARARQLLSPETVGGPFPVAPRETVEA 152
Query: 108 DSRSIYVGN-------------------------VDYACTPEEVQQHFQSCGTVNRVTIL 142
D RSIYVGN VDY T EE+Q HF CG V+RVTIL
Sbjct: 153 DHRSIYVGNSECYCTGSWAPSPLCAENTGAVPGQVDYGGTAEELQAHFHPCGEVHRVTIL 212
Query: 143 TDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK 192
DKF G PKG+AYVEF + Q A+ L+E+ GR +KV KRTN PG+
Sbjct: 213 CDKFSGHPKGYAYVEFTTQLSAQAAVELDESIFRGRVIKVLPKRTNFPGIS 263
>gi|260951495|ref|XP_002620044.1| hypothetical protein CLUG_01203 [Clavispora lusitaniae ATCC 42720]
gi|238847616|gb|EEQ37080.1| hypothetical protein CLUG_01203 [Clavispora lusitaniae ATCC 42720]
Length = 219
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Query: 67 LKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEV 126
L E+E EA LR++ ++++ D S+++ + +VDSRS+Y+GN+ T E+
Sbjct: 63 LTELEREAAMLRDISSQLD-------DISNSTMNKVSTSDVDSRSVYIGNLHRDVTALEL 115
Query: 127 QQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL-LNETELHGRQLKVSAK 184
F S V RVTIL+DK G P G+AY+EF ++ A+ ++ T L GR+LKV K
Sbjct: 116 ALRFSSNEDVVRVTILSDKTTGLPNGYAYLEFSSVEGASQAMARMDGTPLRGRKLKVRWK 175
Query: 185 RTNIPGMKQFR----GRRPNTFGFRGRRPF 210
RTNI G R GR G G R F
Sbjct: 176 RTNIFGYNILRRGRNGRLVRGVGRSGYRSF 205
>gi|154341861|ref|XP_001566882.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064207|emb|CAM40405.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 214
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 19/172 (11%)
Query: 25 DVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKV 84
D D+H E D + D D E E LE+MK+++ ++E+ MQ K
Sbjct: 4 DQDDHRGEMISAED-QFNFDMDAEAE---------LEEMKRQVDSLQED------MQLKA 47
Query: 85 EKEMGAVQDSSSTSATQAEKEEVDSR---SIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 141
+E A + + +A A +R SI+VG++D T +++ F SCG + RVT+
Sbjct: 48 LQESAAKDEGTRKTAAAAGGSSGQARTNTSIFVGDLDLRTTDADLRVFFASCGAITRVTV 107
Query: 142 LTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
L D+ G PKG AYVEF Q A+L + LHG+ L+V+ KR NIP ++
Sbjct: 108 LKDRQGNPKGTAYVEFETEAQAQAAVLKDGQSLHGKPLRVAMKRDNIPAFQR 159
>gi|398019614|ref|XP_003862971.1| RNA-binding protein, putative [Leishmania donovani]
gi|322501202|emb|CBZ36281.1| RNA-binding protein, putative [Leishmania donovani]
Length = 214
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 89/150 (59%), Gaps = 6/150 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+LE+MK++++ ++E+ L+ +Q K+ G + +++ +A+ + + + SI+VG++D
Sbjct: 28 ELEEMKRQVESLQEDM-QLKALQESAAKDEGTRKTAAAAAASSGQTKT--NTSIFVGDLD 84
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
T +++ F SCG + RVT+L D+ G PKG AYVEF A+L + LHG+
Sbjct: 85 LRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILKDGQSLHGKP 144
Query: 179 LKVSAKRTNIPGMKQFRG-RRPNTFGFRGR 207
LKV+ KR NIP + RG R + RGR
Sbjct: 145 LKVAMKRDNIPAFQ--RGISRGGAYALRGR 172
>gi|146093988|ref|XP_001467105.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134071469|emb|CAM70158.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 216
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 89/150 (59%), Gaps = 6/150 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+LE+MK++++ ++E+ L+ +Q K+ G + +++ +A+ + + + SI+VG++D
Sbjct: 28 ELEEMKRQVESLQEDM-QLKALQESAAKDEGTRKTAAAAAASSGQTKT--NTSIFVGDLD 84
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
T +++ F SCG + RVT+L D+ G PKG AYVEF A+L + LHG+
Sbjct: 85 LRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILKDGQSLHGKP 144
Query: 179 LKVSAKRTNIPGMKQFRG-RRPNTFGFRGR 207
LKV+ KR NIP + RG R + RGR
Sbjct: 145 LKVAMKRDNIPAFQ--RGISRGGAYALRGR 172
>gi|223999207|ref|XP_002289276.1| poly-a binding protein [Thalassiosira pseudonana CCMP1335]
gi|220974484|gb|EED92813.1| poly-a binding protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 72/118 (61%), Gaps = 8/118 (6%)
Query: 48 ENEEDPNANS-------KDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSAT 100
++E+DP A S +DLE ++ +K +EEEA + + +EK A
Sbjct: 3 DDEKDPTAASAEGEDDEEDLEKLQAEIKRMEEEAARIAQETEDLEKPAAAAGGGGEKKDG 62
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
AEK D SIYVG VDY+ TPEE+ HF+SCGTV RVTI+ DKF G+PKGFAY+EF
Sbjct: 63 AAEKASKDGHSIYVGQVDYSTTPEELLAHFESCGTVERVTIVCDKFTGKPKGFAYLEF 120
>gi|349603101|gb|AEP99036.1| Polyadenylate-binding protein 2-like protein, partial [Equus
caballus]
Length = 113
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 122 TPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLK 180
T EE++ HF CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+E+ GRQ+K
Sbjct: 1 TAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIK 60
Query: 181 VSAKRTNIPGM 191
V KRTN PG+
Sbjct: 61 VIPKRTNRPGI 71
>gi|401425835|ref|XP_003877402.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493647|emb|CBZ28937.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 216
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 88/150 (58%), Gaps = 6/150 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+LE+MK+++ ++E+ L+ +Q K+ G + +++ +A+ + + + SI+VG++D
Sbjct: 28 ELEEMKRQVDSLQEDM-QLKALQESAAKDEGTRKTAAAAAASSGQTKT--NTSIFVGDLD 84
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQ 178
T +++ F SCG + RVT+L D+ G PKG AYVEF A+L + LHG+
Sbjct: 85 LRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILKDGQSLHGKP 144
Query: 179 LKVSAKRTNIPGMKQFRG-RRPNTFGFRGR 207
LKV+ KR NIP + RG R + RGR
Sbjct: 145 LKVAMKRDNIPAFQ--RGISRGGAYALRGR 172
>gi|344237967|gb|EGV94070.1| Embryonic polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
T EK E D RS+YVGNVDY + E++ +F CG ++RVTIL DKF G PKG+AY+EF
Sbjct: 133 GTPKEKVEADHRSVYVGNVDYGGSAAELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEF 192
Query: 158 VEIDAVQNALLLNETELHGRQLK 180
++VQ A+ L+E+ GR +K
Sbjct: 193 ASQNSVQAAVELDESTFRGRVIK 215
>gi|302823293|ref|XP_002993300.1| hypothetical protein SELMODRAFT_449095 [Selaginella moellendorffii]
gi|300138873|gb|EFJ05625.1| hypothetical protein SELMODRAFT_449095 [Selaginella moellendorffii]
Length = 773
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 98/201 (48%), Gaps = 36/201 (17%)
Query: 53 PNANSKDLED---MKKRLKEIEEEAGALREMQ---AKVEKEMGAVQDSSSTS-------- 98
PN +DL+D MK+R++++E E LR Q AKV ++ A ++T+
Sbjct: 474 PNGKGQDLQDVTEMKRRMRQVELEVTKLRTKQDEAAKVSEKSSAPHPPAATTNIPSVPAA 533
Query: 99 -------------ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 145
Q+ ++ DS+ I V NV +A T E + HF SCG V +VT+LTD
Sbjct: 534 TTSMQTAPLTSFKTPQSSSDDTDSKVILVTNVHFATTKEAISTHFGSCGEVVKVTMLTDG 593
Query: 146 F-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNI-----PGMKQFRGRRP 199
G+PKG AYVEF DA AL LNE+ L R ++V+ K N+ P R R P
Sbjct: 594 VSGKPKGSAYVEFSSKDAADRALSLNESSLLSRPIRVARKDANVAETSSPAAAVMRPRPP 653
Query: 200 NTFGFRG---RRPFIPGVPFV 217
R R F+ G P++
Sbjct: 654 VRMPMRAAFPRAAFMRGSPYM 674
>gi|302772723|ref|XP_002969779.1| hypothetical protein SELMODRAFT_410730 [Selaginella moellendorffii]
gi|300162290|gb|EFJ28903.1| hypothetical protein SELMODRAFT_410730 [Selaginella moellendorffii]
Length = 771
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 98/201 (48%), Gaps = 36/201 (17%)
Query: 53 PNANSKDLED---MKKRLKEIEEEAGALREMQ---AKVEKEMGAVQDSSSTS-------- 98
PN +DL+D MK+R++++E E LR Q AKV ++ A ++T+
Sbjct: 472 PNGKGQDLQDVTEMKRRMRQVELEVTKLRTKQDEAAKVSEKSSAPHPPAATTNIPSVPAA 531
Query: 99 -------------ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 145
Q+ ++ DS+ I V NV +A T E + HF SCG V +VT+LTD
Sbjct: 532 TTSMQTAPLTSFKTPQSSSDDTDSKVILVTNVHFATTKEAISTHFGSCGEVVKVTMLTDG 591
Query: 146 F-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNI-----PGMKQFRGRRP 199
G+PKG AYVEF DA AL LNE+ L R ++V+ K N+ P R R P
Sbjct: 592 VSGKPKGSAYVEFSSKDAADRALSLNESSLLSRPIRVARKDANVAETSSPAAAVMRPRPP 651
Query: 200 NTFGFRG---RRPFIPGVPFV 217
R R F+ G P++
Sbjct: 652 VRMPMRAAFPRAAFMRGSPYM 672
>gi|345800807|ref|XP_851081.2| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Canis lupus familiaris]
Length = 310
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 72/125 (57%), Gaps = 18/125 (14%)
Query: 95 SSTSATQAEKEEVDSRSIYVGN-VDYACTPEEVQQHFQSCGTVNRVTILTDKF------- 146
S T K E D RSIYVGN VDY T EE++ +F CG V+RVTIL DKF
Sbjct: 154 SPCPRTPTGKVESDHRSIYVGNXVDYGSTAEELEAYFNPCGEVHRVTILCDKFSGHPQGV 213
Query: 147 --GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV-SAKRTNIPGMKQ-FRGRRPNTF 202
Q G+AY+EF + Q A+ L+++ GR +KV +A+RTN+PG+ +RG
Sbjct: 214 SASQAAGYAYIEFAAKSSAQAAVELDQSIFRGRVIKVCAAQRTNLPGISSTYRG------ 267
Query: 203 GFRGR 207
G RG+
Sbjct: 268 GLRGQ 272
>gi|308459125|ref|XP_003091888.1| hypothetical protein CRE_30216 [Caenorhabditis remanei]
gi|308254868|gb|EFO98820.1| hypothetical protein CRE_30216 [Caenorhabditis remanei]
Length = 185
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 92/157 (58%), Gaps = 11/157 (7%)
Query: 52 DPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS 111
D N+N +E+ E++ EA L+++Q + +M + T+ E++ +DSRS
Sbjct: 5 DNNSNMCSMEE------ELQAEAVVLKQIQNSLAAKM---EIGKVCLPTEEEQKAIDSRS 55
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLN 170
++VGNV++ T EE++ HF+ CG + R TI DK + K FAY+EF +V+ A ++N
Sbjct: 56 VFVGNVEFGATVEELETHFKGCGEIVRTTIPKDKMTNRQKNFAYIEFECAASVEYAAVMN 115
Query: 171 ETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGR 207
+ GR + V+AKRTN PGM RGR GFRGR
Sbjct: 116 GSTFRGRPIVVTAKRTNKPGMGAARGRGGYE-GFRGR 151
>gi|50290735|ref|XP_447800.1| hypothetical protein [Candida glabrata CBS 138]
gi|38603385|dbj|BAD02472.1| hypothetical protein [Candida glabrata]
gi|49527111|emb|CAG60749.1| unnamed protein product [Candida glabrata]
Length = 144
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPK-GFAYVEFVEI 160
A + E D+ SIY+GN+ TPEE+ +HF+SCG + R+T+L DK P G+AYVEF I
Sbjct: 37 ALQLEADACSIYIGNISLDTTPEEIDEHFKSCGVIKRITMLYDKNTGPSIGYAYVEFDSI 96
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
D+ AL N T L + V KRTNIP KQ
Sbjct: 97 DSRDKALDFNGTNLRQHVISVERKRTNIPNYKQ 129
>gi|356528571|ref|XP_003532874.1| PREDICTED: uncharacterized protein LOC100817963 [Glycine max]
Length = 493
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVD 108
NE DP ++++ +++ LK A ++Q + K A +S ++A E+VD
Sbjct: 263 NERDPRSSTRPVKENANTLKVSNGNANPALDVQKEFSK---AHLTASGSNAAGRPSEDVD 319
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNAL 167
SR+I+V NV +A T + + +HF G V +V I+TD GQPKG AYVEF+ +A NAL
Sbjct: 320 SRTIFVSNVHFAATKDGLSRHFNRFGEVLKVIIVTDAATGQPKGAAYVEFMRKEAADNAL 379
Query: 168 LLNETELHGRQLKVSAKRTNI----PGMKQFRGRRPNTF--GFRGRRPFIPGVP 215
L+ T R LKV K P M R R + F R PF G+P
Sbjct: 380 SLDNTSFMSRILKVIKKSATTQESAPAMAWPRIVRGSPFPSARFSRHPFPRGIP 433
>gi|343471000|emb|CCD16472.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 212
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 44 DADN---ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSAT 100
D DN E DP A +L +M++++ +++E+ L+ +Q ++ G + + +T +
Sbjct: 7 DGDNALFNTEVDPEA---ELAEMQRQVNDLQEDL-RLKALQETAAQDEGQRKSTGNTFSK 62
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVE 159
A S++VG +D T +++ F CGT+ R+T+L DKF GQ KG AY+EF
Sbjct: 63 NA--------SVFVGGMDPRTTESDLRVFFSGCGTIKRLTMLRDKFTGQQKGTAYIEFDT 114
Query: 160 IDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPN--TFGFRG 206
++ +A++ N LHG+ L V+ KR N+P ++ RG P G+RG
Sbjct: 115 VEQATSAIVKNGQSLHGKPLTVAVKRDNVPAFQRGRGGAPGFPRGGYRG 163
>gi|342181601|emb|CCC91081.1| putative RNA-binding protein RBP14 [Trypanosoma congolense IL3000]
Length = 274
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 44 DADN---ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSAT 100
D DN E DP A +L +M++++ +++E+ L+ +Q ++ G + + +T +
Sbjct: 69 DGDNALFNTEVDPEA---ELAEMQRQVNDLQEDL-RLKALQETAAQDEGQRKSTGNTFSK 124
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVE 159
A S++VG +D T +++ F CGT+ R+T+L DKF GQ KG AY+EF
Sbjct: 125 NA--------SVFVGGMDPRTTESDLRVFFSGCGTIKRLTMLRDKFTGQQKGTAYIEFDT 176
Query: 160 IDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPN--TFGFRG 206
++ +A++ N LHG+ L V+ KR NIP ++ RG P G+RG
Sbjct: 177 VEQATSAIVKNGQSLHGKPLTVAVKRDNIPAFQRGRGGAPGFPRGGYRG 225
>gi|363752247|ref|XP_003646340.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889975|gb|AET39523.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
Length = 355
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
A++ E+D+RSI+V ++ T E ++ HF+ G +NR+TIL +K G+PKG+AY+EF +
Sbjct: 75 AKQVELDTRSIFVSSITPETTAETLETHFKDVGMINRITILHNKRTGEPKGYAYIEFEMV 134
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
++V AL LN +E + + + V+ KRTN+PG
Sbjct: 135 ESVAKALELNGSEFNNKIITVAKKRTNLPGF 165
>gi|403363390|gb|EJY81440.1| RNA recognition motif protein [Oxytricha trifallax]
Length = 388
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFV 158
T E+E +RSI++ NVDY T +++ HF+ CG + R TI TDK GQP G AY+EF
Sbjct: 215 TPEEEELTLARSIFIKNVDYKTTKNDLEDHFKECGQITRCTIATDKHSGQPLGHAYIEFA 274
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIP 189
++ Q + LLNE+ GRQ+ V KR N P
Sbjct: 275 TLEGAQRSKLLNESLFKGRQITVQPKRKNKP 305
>gi|45187874|ref|NP_984097.1| ADR001Cp [Ashbya gossypii ATCC 10895]
gi|27475785|gb|AAO16965.1|AF384990_2 Yib1 [Eremothecium gossypii]
gi|44982658|gb|AAS51921.1| ADR001Cp [Ashbya gossypii ATCC 10895]
gi|374107313|gb|AEY96221.1| FADR001Cp [Ashbya gossypii FDAG1]
Length = 324
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
A++ E+DSRS++V ++ T E +++HF+ G ++R+TIL +K G+PKG+AY++F I
Sbjct: 75 AKQVELDSRSVFVSSITPEATAEMLEEHFKDVGVISRITILYNKKTGEPKGYAYIQFESI 134
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
+V+ AL L+ + +G + V+ KRTN+PG +
Sbjct: 135 SSVEKALQLDGSSFNGNTISVAKKRTNLPGFNR 167
>gi|308456413|ref|XP_003090648.1| hypothetical protein CRE_01435 [Caenorhabditis remanei]
gi|308261959|gb|EFP05912.1| hypothetical protein CRE_01435 [Caenorhabditis remanei]
Length = 197
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 17/137 (12%)
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
EIE EA L+E+Q K+ + M + SS T + E++ +D++SI+VGNVD+ T E++
Sbjct: 17 EIEAEARVLKEIQMKLSETMDVGKVSSPT---EEEQKAIDAKSIFVGNVDFGATVAELEA 73
Query: 129 HFQSCGTVNRVTIL--------------TDKFGQPKGFAYVEFVEIDAVQNALLLNETEL 174
HF+ CG + R+TI + + +A++EF +V NA+++N +
Sbjct: 74 HFKGCGEIVRITIPKDKITKKQKKYVKEVKEILLSEYYAFIEFESAGSVANAIVMNGSTF 133
Query: 175 HGRQLKVSAKRTNIPGM 191
RQ+ V+ KRTN PGM
Sbjct: 134 RERQIVVTLKRTNKPGM 150
>gi|357457685|ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355488171|gb|AES69374.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 685
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 1 MEQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDL 60
++Q EQE P +I V+ + + D + + D D ++
Sbjct: 402 LKQSQEQEQPTAACN-PSRKIVNISVNVNTWKPDQYQEPREVVELDGHKISD-----NEI 455
Query: 61 EDMKKRLKEIEEEAGALR------EMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYV 114
D + ++ ++E A AL+ + V+KE + +S E+VDSR+I+V
Sbjct: 456 GDSRSNMQLVKENANALKISNGNVNLAPDVQKESSKAHCTPGSSVAGRPTEDVDSRTIFV 515
Query: 115 GNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETE 173
NV +A T + + +HF G V +V I+TD GQPKG AYVEF+ +A NAL L+ T
Sbjct: 516 SNVHFAATKDALSRHFNKFGEVLKVIIVTDAATGQPKGAAYVEFMLKEAADNALSLDGTS 575
Query: 174 LHGRQLKVSAKRTNIPGMKQ---------FRGRRPNTFGFRGRRPFIPGVP 215
R LKV K++ P ++ RG T F R PF G+P
Sbjct: 576 FMSRILKV-VKKSAAPAQQESAPTTTWPHVRGSPFPTARF-PRPPFARGIP 624
>gi|198426504|ref|XP_002123932.1| PREDICTED: similar to zinc finger CCCH-type containing 14 [Ciona
intestinalis]
Length = 842
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 13/149 (8%)
Query: 41 HEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQ----AKVEKEMGAVQDSSS 96
H+ + DN D ++L +M+++L +++EEA L+ +Q A +E+ + +
Sbjct: 639 HDQEPDNVESSD-----QELMNMREKLLKMQEEAKKLKILQTEQLALLERTVSLKTAENK 693
Query: 97 TSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYV 155
SAT E D +SI++ NV ++ T +++ +HF CG V R TIL D F G PKGFAY+
Sbjct: 694 PSATA---ENSDEKSIHIANVHFSSTEKQLSEHFSICGKVVRATILKDAFTGHPKGFAYL 750
Query: 156 EFVEIDAVQNALLLNETELHGRQLKVSAK 184
+F E +V AL + T R +KV+ K
Sbjct: 751 QFEEASSVDMALAFDGTTFCSRAIKVTKK 779
>gi|440909353|gb|ELR59267.1| hypothetical protein M91_03724 [Bos grunniens mutus]
Length = 424
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 87/151 (57%), Gaps = 15/151 (9%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQ---DSSSTS 98
E D + EDP +LE +K R++E+EEEA L+E+Q +VEK+M ++
Sbjct: 259 EGDPGDGAIEDP-----ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVI 313
Query: 99 ATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
+ EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKGF +
Sbjct: 314 MSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGF----W 369
Query: 158 VEIDAVQNAL--LLNETELHGRQLKVSAKRT 186
+I + +L +T G Q + S T
Sbjct: 370 PDIKGLIRVTFYILEKTWFMGCQFQTSGVFT 400
>gi|308448720|ref|XP_003087733.1| hypothetical protein CRE_13229 [Caenorhabditis remanei]
gi|308253205|gb|EFO97157.1| hypothetical protein CRE_13229 [Caenorhabditis remanei]
Length = 194
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 14/134 (10%)
Query: 69 EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
EIE EA L+E+Q K+ + M + SS T + E++ +D++SI+VGNVD+ T E++
Sbjct: 17 EIEAEARVLKEIQMKLSETMDVGKVSSPT---EEEQKAIDAKSIFVGNVDFGATVAELEA 73
Query: 129 HFQSCGTVNRVTI-----------LTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
HF+ CG + R+TI + + A++EF +V NA+++N + R
Sbjct: 74 HFKGCGEIVRITIPKDKITKKQKKYVKEVKEILFHAFIEFECAASVANAIVMNGSTFRER 133
Query: 178 QLKVSAKRTNIPGM 191
Q+ V+ KRTN PGM
Sbjct: 134 QIVVTLKRTNKPGM 147
>gi|359075107|ref|XP_002694906.2| PREDICTED: embryonic polyadenylate-binding protein 2 [Bos taurus]
Length = 319
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 77/174 (44%), Gaps = 59/174 (33%)
Query: 67 LKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGN---------- 116
L E EE AGAL A Q S + + EK E D RSIYVGN
Sbjct: 109 LDEGEEAAGALL-----------ARQLLSPETDSPLEKAEADHRSIYVGNGWRTEAQATT 157
Query: 117 -------------------------------------VDYACTPEEVQQHFQSCGTVNRV 139
VDY T +E++ +F CG ++RV
Sbjct: 158 PHPGARSTPLYQENVLQEPLGGGGQCTRPPTMAHAWQVDYGGTAQELEAYFNHCGEIHRV 217
Query: 140 TILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK 192
TIL DKF G PKG+AY+EF + Q A+ L+++ GR +KV KRTN+PG+
Sbjct: 218 TILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRVIKVLPKRTNLPGIS 271
>gi|254568026|ref|XP_002491123.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238030920|emb|CAY68843.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352350|emb|CCA38749.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 293
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
A + ++D RS++VGNV + PEE+ Q G VNRVTIL D + G PKG+AYVEF E
Sbjct: 121 ANQADIDKRSVFVGNVHSSADPEELVQIMTKAGVVNRVTILLDHYTGHPKGYAYVEFEEE 180
Query: 161 DAVQNAL-LLNETELHGRQLKVSAKRTNIPGMKQFRGR---RPNTFGFRG 206
+V A+ L ++ ++L V KRTN+PG+ + R R + G++G
Sbjct: 181 ASVPKAIELFHQYVFKEKELNVVPKRTNVPGLAKRHPRGAHRGSHEGYKG 230
>gi|118371394|ref|XP_001018896.1| polyadenylate-binding protein 2 [Tetrahymena thermophila]
gi|89300663|gb|EAR98651.1| polyadenylate-binding protein 2 [Tetrahymena thermophila SB210]
Length = 180
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDA 162
+++E D RSI+V NV+Y T EE+ F+ CG + ++TI + GQ KGFAY++FV+ +
Sbjct: 52 QQKEEDKRSIFVQNVEYNTTKEELMDIFKDCGEIEKITIPQTRQGQGKGFAYIQFVDKSS 111
Query: 163 VQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPFVPYGYG 222
V+ A L+++ GR +KV KRTN G K+ + +PN GF P++ + +G
Sbjct: 112 VELAKALSDSIHRGRAIKVLPKRTNQHGFKK-KSFKPN--GFSKSFPYMKNSIMKGFMFG 168
>gi|296081813|emb|CBI20818.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 57 SKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE-VDSRSIYVG 115
++ + D+K R ++E E LR +++ G D SS+S T EE ++ R++YV
Sbjct: 404 AQKMLDLKVRFHQLEREMCKLRSKHTDLKR--GGKPDLSSSSGTLRHPEEDIEPRTVYVT 461
Query: 116 NVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLNETEL 174
NV +A T E + HF CG V V ILTD+ QPK A++ F +++V AL L+ T
Sbjct: 462 NVHFAATKEALSNHFAKCGLVVNVVILTDETIAQPKRSAFITFASVESVNKALALSGTSF 521
Query: 175 HGRQLKV 181
R +KV
Sbjct: 522 FSRTVKV 528
>gi|413938965|gb|AFW73516.1| hypothetical protein ZEAMMB73_612183 [Zea mays]
Length = 120
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 21/113 (18%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
DE+EH+VYG EIP++ D D D D D A ++L++MK
Sbjct: 2 DEEEHEVYGQEIPEDGDMD------------------GADVDMAASGDDAAKLQELDEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
+RLKE+EEEA ALR+MQAKV KEM Q +++T KE+VD+RS+YVGNV
Sbjct: 44 RRLKEMEEEAAALRDMQAKVAKEM---QGGDPSASTAEAKEQVDARSVYVGNV 93
>gi|407416749|gb|EKF37788.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 212
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 13/149 (8%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVD 108
E DP A +L++M++++ +++E+ L+ +Q ++ G + + S +
Sbjct: 16 TEMDPEA---ELQEMQRQVSDLQEDL-RLKTLQETAAQDEGHRKSTGSVA--------TK 63
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
+ SI+VG +D T E++ F SCGT+ R+T+L DKF GQ KG AY+EF + +
Sbjct: 64 NTSIFVGGMDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGI 123
Query: 168 LLNETELHGRQLKVSAKRTNIPGMKQFRG 196
L + LHG+ L V+ KR NIP ++ RG
Sbjct: 124 LKDGQSLHGKPLNVAMKRDNIPAFQRGRG 152
>gi|407851931|gb|EKG05622.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 24 IDVDEHEHEH-DHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQA 82
+ + E + E D E+ E DP A +L++M++++ +++E+ L+ +Q
Sbjct: 9 VPIKERKRERGDMSSKPSDENGVQFNTEMDPEA---ELQEMQRQVSDLQEDL-RLKTLQE 64
Query: 83 KVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 142
++ G + + + A SI+VG +D T E++ F SCGT+ R+T+L
Sbjct: 65 TAAQDEGHRKSTGFVATKNA--------SIFVGGLDPRTTEGELRVFFSSCGTIKRLTML 116
Query: 143 TDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRG 196
DKF GQ KG AY+EF + +L + LHG+ L V+ KR NIP ++ RG
Sbjct: 117 RDKFTGQLKGNAYIEFEAPEQAAAGILKDGQSLHGKPLNVAMKRDNIPAFQRGRG 171
>gi|294460473|gb|ADE75814.1| unknown [Picea sitchensis]
Length = 485
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFV 158
T E+ DSR+++V NV +A T E + +HF CG V +V +LTD GQPKG AY+EF
Sbjct: 288 TSVRPEDADSRTVFVSNVHFAATKEAITKHFSRCGEVVKVIMLTDVATGQPKGSAYIEFS 347
Query: 159 EIDAVQNALLLNETELHGRQLKVSAK 184
+ + AL LNET R LKV K
Sbjct: 348 CRETAEIALTLNETSFMSRMLKVVRK 373
>gi|359487356|ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
Length = 700
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
E+ DSR+I+V NV +A T + + +HF G V +V I+TD GQPKG AYVEF+ +A
Sbjct: 525 EDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATGQPKGSAYVEFMRKEAA 584
Query: 164 QNALLLNETELHGRQLKVSAKRTNI-----PGMKQFRGRRPNTFGFR--GRRPFIPGVP 215
++AL L+ T R LKV KR++ PGM R R + F R PF G+P
Sbjct: 585 EHALSLDGTSFMSRILKV-VKRSSTHQEAAPGMSWPRIARGSPFAAARFARVPFQRGIP 642
>gi|313239216|emb|CBY14172.1| unnamed protein product [Oikopleura dioica]
Length = 584
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 43 HDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA 102
H ++++E N+ DL D EA ++++Q K + +V ST A
Sbjct: 403 HPDESDDESSKLLNTSDLID----------EAQKIKQLQKKTLPQEMSVTPIISTMDINA 452
Query: 103 --EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVE 159
+ + D R+++V +D T E+++HFQ CGT+ RVTIL D+F + KG AY++F
Sbjct: 453 SLDSSDTDKRTVFVSGLDVITTEPELKEHFQVCGTIVRVTILRDRFTRMSKGCAYIQFAT 512
Query: 160 IDAVQNALLLNETELHGRQLKVSAK 184
+D Q A + + TE+HG+ ++V+ K
Sbjct: 513 LDQRQTADVFDNTEIHGKTIRVTQK 537
>gi|297736228|emb|CBI24866.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
E+ DSR+I+V NV +A T + + +HF G V +V I+TD GQPKG AYVEF+ +A
Sbjct: 519 EDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATGQPKGSAYVEFMRKEAA 578
Query: 164 QNALLLNETELHGRQLKVSAKRTNI-----PGMKQFRGRRPNTFGFR--GRRPFIPGVP 215
++AL L+ T R LKV KR++ PGM R R + F R PF G+P
Sbjct: 579 EHALSLDGTSFMSRILKV-VKRSSTHQEAAPGMSWPRIARGSPFAAARFARVPFQRGIP 636
>gi|326513590|dbj|BAJ87814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 644
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEK-EMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
++ D+K +LK++E + LR QA++ + GA+ ++ +E+ D+R++ V NV
Sbjct: 463 EMLDVKLKLKQVELDMLKLRSKQAQINNGKQGALPSGPHSNL----EEDADARTVLVTNV 518
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
+A T E + HF CGTV ++ +LTD G PKG A+V F + +++ AL L+ T +
Sbjct: 519 HFAATKEALSTHFMKCGTVLKLNMLTDAITGHPKGAAFVTFADKESIGRALSLSGTSFYS 578
Query: 177 RQLKVSAKRTNIPGM 191
R L V K PG
Sbjct: 579 RVLTVMRKAEAPPGF 593
>gi|71408239|ref|XP_806536.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70870310|gb|EAN84685.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 24 IDVDEHEHEH-DHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQA 82
+ + E + E D E+ E DP A +L++M++++ +++E+ L+ +Q
Sbjct: 9 VPIKERKRERGDMSSKPSDENGVQFNTEMDPEA---ELQEMQRQVSDLQEDL-RLKTLQE 64
Query: 83 KVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 142
++ G + S+ AT+ + SI+VG +D T E++ F SCGT+ R+T+L
Sbjct: 65 TAAQDEGH-RKSTGFVATK-------NTSIFVGGLDPRTTEGELRVFFSSCGTIKRLTML 116
Query: 143 TDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRG 196
DKF GQ KG AY+EF + +L + LHG+ L V+ KR NIP ++ RG
Sbjct: 117 RDKFTGQLKGNAYIEFEAPEQAAAGILKDGQSLHGKPLNVAMKRDNIPAFQRGRG 171
>gi|71654126|ref|XP_815688.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70880762|gb|EAN93837.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 13/149 (8%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVD 108
E DP A +L++M++++ +++E+ L+ +Q ++ G + S+ AT+
Sbjct: 35 TEMDPEA---ELQEMQRQVSDLQEDL-RLKTLQETAAQDEGH-RKSTGFVATK------- 82
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
+ SI+VG +D T E++ F SCGT+ R+T+L DKF GQ KG AY+EF + +
Sbjct: 83 NTSIFVGGLDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAAGI 142
Query: 168 LLNETELHGRQLKVSAKRTNIPGMKQFRG 196
L + LHG+ L V+ KR NIP ++ RG
Sbjct: 143 LKDGQSLHGKPLNVAMKRDNIPAFQRGRG 171
>gi|115457640|ref|NP_001052420.1| Os04g0306800 [Oryza sativa Japonica Group]
gi|38347198|emb|CAD40523.2| OSJNBa0023J03.10 [Oryza sativa Japonica Group]
gi|113563991|dbj|BAF14334.1| Os04g0306800 [Oryza sativa Japonica Group]
gi|116308926|emb|CAH66055.1| OSIGBa0125J07.4 [Oryza sativa Indica Group]
gi|116309108|emb|CAH66214.1| OSIGBa0096F13.9 [Oryza sativa Indica Group]
gi|215695292|dbj|BAG90483.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222628583|gb|EEE60715.1| hypothetical protein OsJ_14219 [Oryza sativa Japonica Group]
Length = 649
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE-VDSRSIYVGNV 117
++ D+K +LK++E + LR QA++ V+ +S A +E DSR++ V NV
Sbjct: 467 EMLDVKLKLKQVELDVLKLRSKQAQINN----VKQGFLSSGPHANLDEDADSRTVLVTNV 522
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
+A T E + HF CGTV ++ ILTD G PKG A+V F + ++V+ A+ L+ +
Sbjct: 523 HFAATKEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGSSFFS 582
Query: 177 RQLKVSAKRTNIPGM 191
R L V K PG
Sbjct: 583 RVLTVMRKAEAPPGF 597
>gi|215765000|dbj|BAG86697.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE-VDSRSIYVGNV 117
++ D+K +LK++E + LR QA++ V+ +S A +E DSR++ V NV
Sbjct: 184 EMLDVKLKLKQVELDVLKLRSKQAQINN----VKQGFLSSGPHANLDEDADSRTVLVTNV 239
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
+A T E + HF CGTV ++ ILTD G PKG A+V F + ++V+ A+ L+ +
Sbjct: 240 HFAATKEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGSSFFS 299
Query: 177 RQLKVSAKRTNIPGM 191
R L V K PG
Sbjct: 300 RVLTVMRKAEAPPGF 314
>gi|218194572|gb|EEC76999.1| hypothetical protein OsI_15321 [Oryza sativa Indica Group]
Length = 366
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE-VDSRSIYVGNV 117
++ D+K +LK++E + LR QA++ V+ +S A +E DSR++ V NV
Sbjct: 184 EMLDVKLKLKQVELDVLKLRSKQAQINN----VKQGFLSSGPHANLDEDADSRTVLVTNV 239
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHG 176
+A T E + HF CGTV ++ ILTD G PKG A+V F + ++V+ A+ L+ +
Sbjct: 240 HFAATKEALSGHFMKCGTVLKINILTDAISGHPKGAAFVTFTDKESVEKAVSLSGSSFFS 299
Query: 177 RQLKVSAKRTNIPGM 191
R L V K PG
Sbjct: 300 RVLTVMRKAEAPPGF 314
>gi|410084060|ref|XP_003959607.1| hypothetical protein KAFR_0K01170 [Kazachstania africana CBS 2517]
gi|372466199|emb|CCF60472.1| hypothetical protein KAFR_0K01170 [Kazachstania africana CBS 2517]
Length = 141
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVE 159
A + + DS+SI+V N+ TPE +++HF+ CG++ R+TIL +K + G+AY+EF
Sbjct: 38 MAVQRDADSKSIFVRNIHSDTTPEIIEEHFKECGSIKRITILCNKSTNKFNGYAYIEFDS 97
Query: 160 IDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQF-RGRRPNTF 202
+ + ALLL+ TEL+G ++ V KRTN P + +GR+ ++
Sbjct: 98 REKREQALLLDNTELNGCKISVLRKRTNRPTSNIYDKGRKTSSI 141
>gi|449463793|ref|XP_004149616.1| PREDICTED: uncharacterized protein LOC101209889 [Cucumis sativus]
Length = 706
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
EE D+R+I+V NV +A T + + +HF G V +V I+TD GQPKG AYVEF+ ++
Sbjct: 531 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 590
Query: 164 QNALLLNETELHGRQLKVSAKR-------TNIPGMKQFRGRRPNTFGFRGRRPFIPGVP 215
+NAL L+ T R LKV K + + + RG T F R PF+ GVP
Sbjct: 591 ENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRF-TRAPFMRGVP 648
>gi|356555297|ref|XP_003545970.1| PREDICTED: uncharacterized protein LOC100787464 [Glycine max]
Length = 481
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
E+VDSR+I+V NV +A T + + +HF G V +V I+TD GQPKG AYVEF+ +A
Sbjct: 301 EDVDSRTIFVSNVHFAATKDGLSRHFNRFGDVLKVIIVTDAATGQPKGAAYVEFMRKEAA 360
Query: 164 QNALLLNETELHGRQLKVSAKRT----NIPGMKQFRGRRPNTF--GFRGRRPFIPGVPFV 217
NAL L+ T R LKV K + P M R + + F R PF G+P V
Sbjct: 361 DNALSLDNTSFMSRILKVIKKSATPQESAPAMAWPRIVKGSPFPSARFSRHPFPRGIPGV 420
>gi|195612514|gb|ACG28087.1| hypothetical protein [Zea mays]
gi|413938967|gb|AFW73518.1| hypothetical protein ZEAMMB73_612183 [Zea mays]
Length = 93
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 21/112 (18%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
DE+EH+VYG EIP+ D D+D D D D A ++L++MK
Sbjct: 2 DEEEHEVYGQEIPE--DGDMDG----------------ADVDMAASGDDAAKLQELDEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGN 116
+RLKE+EEEA ALR+MQAKV KEM Q +++T KE+VD+RS+YVGN
Sbjct: 44 RRLKEMEEEAAALRDMQAKVAKEM---QGGDPSASTAEAKEQVDARSVYVGN 92
>gi|340054247|emb|CCC48543.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 213
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 13/142 (9%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVD 108
E DP A +L++M++++ +++E+ L+ +Q + G + + S++ +
Sbjct: 15 TEIDPEA---ELQEMQRQVNDLQEDL-RLKTLQETAAHDEGQRKGTGSST--------IK 62
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
+ SI+VG +D T +++ F CG + R+T+L DKF GQ KG +Y+EF ++ AL
Sbjct: 63 NTSIFVGGLDPRTTESDLRVFFSGCGAIKRLTMLRDKFTGQLKGTSYIEFETVEQANIAL 122
Query: 168 LLNETELHGRQLKVSAKRTNIP 189
+ N LHGR L V+ KR N+P
Sbjct: 123 VKNGQSLHGRPLVVAVKRDNVP 144
>gi|72390421|ref|XP_845505.1| RNA-binding protein RBP14 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360364|gb|AAX80780.1| RNA-binding protein RBP14, putative [Trypanosoma brucei]
gi|70802040|gb|AAZ11946.1| RNA-binding protein RBP14, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261328909|emb|CBH11887.1| RNA-binding protein RBP14, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 16/154 (10%)
Query: 43 HDADN---ENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA 99
D DN E DP +L++M++++ +++E+ L+ +Q ++ G T+
Sbjct: 6 SDGDNVLFNTEVDPEL---ELQEMQRQVNDLQEDL-RLKTLQETAAQDEG----QRKTTG 57
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV 158
A K + S++VG +D T +++ F +CGT+ R+T+L DKF GQ KG AY+EF
Sbjct: 58 VVASK----NTSVFVGGMDPRTTESDLRVFFSACGTIKRLTMLRDKFTGQQKGTAYIEFE 113
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGMK 192
++ A++ N LHG+ L V+ KR NIP +
Sbjct: 114 TVEQAAAAIVKNGQSLHGKPLTVAMKRDNIPAFQ 147
>gi|308479279|ref|XP_003101849.1| hypothetical protein CRE_12119 [Caenorhabditis remanei]
gi|308262759|gb|EFP06712.1| hypothetical protein CRE_12119 [Caenorhabditis remanei]
Length = 169
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 12/130 (9%)
Query: 54 NANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIY 113
N NS DLE +E EA L+E+Q K+ ++M T T+ E++ +D++SI+
Sbjct: 11 NFNSMDLE--------LEAEAKVLKEIQTKMFEKM---DTGKMTPPTEEEQKAIDAKSIF 59
Query: 114 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP-KGFAYVEFVEIDAVQNALLLNET 172
V NV++ T EE++QHF+ CG + R TI DK + K +A++EF +V+NA ++N +
Sbjct: 60 VSNVEFGATIEELKQHFKGCGEIVRTTIPKDKHTKKQKNYAFIEFDSASSVENAAVMNGS 119
Query: 173 ELHGRQLKVS 182
G S
Sbjct: 120 TFRGMGYSTS 129
>gi|224059648|ref|XP_002299951.1| predicted protein [Populus trichocarpa]
gi|222847209|gb|EEE84756.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 97 TSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYV 155
+SA+ E+ DSR+I+V NV +A T + + +HF G V +V ++TD GQP G AYV
Sbjct: 492 SSASGRPLEDADSRTIFVSNVHFAATKDSLSRHFNKFGEVLKVVLVTDAATGQPTGSAYV 551
Query: 156 EFVEIDAVQNALLLNETELHGRQLKV----SAKRTNIPGMKQFRGRRPNTF--GFRGRRP 209
EF+ +A NAL L+ T R +KV S+ + P M R R +++ G R P
Sbjct: 552 EFMRKEAADNALSLDGTSFMSRIVKVMKRSSSNQEASPVMTWPRISRGSSYAAGRFARTP 611
Query: 210 FIPGVP-FVPYGY 221
F G P F P Y
Sbjct: 612 FPRGTPIFRPRLY 624
>gi|115477168|ref|NP_001062180.1| Os08g0504600 [Oryza sativa Japonica Group]
gi|42407676|dbj|BAD08825.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113624149|dbj|BAF24094.1| Os08g0504600 [Oryza sativa Japonica Group]
Length = 684
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRSIYVGNV 117
D+ M + + L + + + + A+ S ++S + A E+ DSR++YV NV
Sbjct: 476 DITPMNATVTSLTSNIKELAHGEVQKDSQRSAIASSVTSSYSTAHPTEDADSRTLYVSNV 535
Query: 118 DYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHG 176
+ T + + +HF G V +V I+T+ GQP G AYVEF+ ++ + AL LN T
Sbjct: 536 HFGATKDALSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERALSLNGTSFMA 595
Query: 177 RQLKVSAKRT-------NIPG------------MKQFRGRRPNTFGFRGRRPFIPG 213
R LKV + + PG M RG P + FRGR P I G
Sbjct: 596 RILKVVRRSSHEAAHFYGWPGGGRTSMYARHGRMAYPRGGLPGS-TFRGRAPMIAG 650
>gi|120537458|gb|AAI30002.1| LOC390748 protein [Homo sapiens]
Length = 255
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 58 KDLEDMKKRLKEIEEEAGALRE--MQAKVEKEMGAVQD--------SSSTSATQAEKEEV 107
++LE +K ++ +E+ G R +Q + E+E G S T EK E
Sbjct: 85 QELEAIKMKVCAMEQAEGTPRPPGVQQQAEEEEGTAAGQLLSPETVGCPLSGTPEEKVEA 144
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI-DAVQN 165
D RS+YVGNVDY + EE++ HF CG V+RVTIL DKF G PKG E + A Q
Sbjct: 145 DHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGCCRKEPTSLGSAPQT 204
Query: 166 ALLLNETELHGRQLKVSAKRTNIPG 190
A +T+ G +A PG
Sbjct: 205 AGAFEDTQAPGGHPSPTAASRAGPG 229
>gi|323304471|gb|EGA58240.1| Sgn1p [Saccharomyces cerevisiae FostersB]
Length = 141
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
A + E DSRSI+VGN+ TPE+++ HF+ CG + R+T+L D+ G PKG+ Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKBCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 161 DAVQNALLLNETELHGRQLKVSAKR 185
+ AL LN EL G+++ K+
Sbjct: 116 AYXEKALQLNGGELKGKKISCLQKK 140
>gi|449501608|ref|XP_004161415.1| PREDICTED: uncharacterized protein LOC101228197 [Cucumis sativus]
Length = 709
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
EE D+R+I+V NV +A T + + +HF G V +V I+TD GQPKG AYVEF+ ++
Sbjct: 531 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 590
Query: 164 QNALLLNETELHGRQLKVSAKR----------TNIPGMKQFRGRRPNTFGFRGRRPFIPG 213
+NAL L+ T R LK A R + + + RG T F R PF+ G
Sbjct: 591 ENALSLDGTSFMSRILKSIAGRKENASQLEGASTVIWPRAVRGSPFPTSRF-TRAPFMRG 649
Query: 214 VP 215
VP
Sbjct: 650 VP 651
>gi|444313531|ref|XP_004177423.1| hypothetical protein TBLA_0A01040 [Tetrapisispora blattae CBS 6284]
gi|387510462|emb|CCH57904.1| hypothetical protein TBLA_0A01040 [Tetrapisispora blattae CBS 6284]
Length = 145
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFV 158
TQAE D SI++GN+D + TP+ +++HF+ G + R+T+ D KG+AYVEF+
Sbjct: 30 TQAE---ADKCSIFIGNIDPSVTPDVIEEHFKVSGQIKRITLFGDGHASHSKGYAYVEFI 86
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
+NAL LN + L+ +++ V KRTN+P K+
Sbjct: 87 SPSGQENALKLNGSVLNNKRIIVQKKRTNLPRYKR 121
>gi|255716954|ref|XP_002554758.1| KLTH0F13090p [Lachancea thermotolerans]
gi|238936141|emb|CAR24321.1| KLTH0F13090p [Lachancea thermotolerans CBS 6340]
Length = 145
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 67 LKEIEEEAGALREMQA----KVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
L + E R++QA KV+ + V S +E+ + D+RSI++ N+ +
Sbjct: 10 LTYLNEWNMNTRKIQASTPHKVKSQSCKVVSKSENEI--SEQRKTDARSIFLRNIPVDIS 67
Query: 123 PEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS 182
++ HF+ GT+NRVTI T++ G+AY+EF E + AL LN +EL G +++V+
Sbjct: 68 INLLEDHFKLYGTINRVTIFTNRKTFNLGYAYIEFEEDCSADQALDLNNSELCGHKIEVT 127
Query: 183 AKRTNIPGMKQ 193
KRTN+PG+++
Sbjct: 128 KKRTNLPGIRR 138
>gi|218201413|gb|EEC83840.1| hypothetical protein OsI_29794 [Oryza sativa Indica Group]
gi|222640831|gb|EEE68963.1| hypothetical protein OsJ_27861 [Oryza sativa Japonica Group]
Length = 725
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 22/165 (13%)
Query: 70 IEEEAGALREMQAKVEKEMGAVQDSSSTSATQAE-KEEVDSRSIYVGNVDYACTPEEVQQ 128
+E+ L + + + + A+ S ++S + A E+ DSR++YV NV + T + + +
Sbjct: 528 VEKTTQELAHGEVQKDSQRSAIASSVTSSYSTAHPTEDADSRTLYVSNVHFGATKDALSR 587
Query: 129 HFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRT- 186
HF G V +V I+T+ GQP G AYVEF+ ++ + AL LN T R LKV + +
Sbjct: 588 HFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERALSLNGTSFMARILKVVRRSSH 647
Query: 187 ------NIPG------------MKQFRGRRPNTFGFRGRRPFIPG 213
PG M RG P + FRGR P I G
Sbjct: 648 EAAHFYGWPGGGRTSMYARHGRMAYPRGGLPGS-TFRGRAPMIAG 691
>gi|345326998|ref|XP_001512144.2| PREDICTED: RNA-binding protein 34-like [Ornithorhynchus anatinus]
Length = 416
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y VQ+HF CG V V I+ D G KGF YV F
Sbjct: 267 SETSSRDKRSVFVGNLAYKIEEASVQEHFSDCGQVVAVRIVRDGVTGAGKGFGYVLFANT 326
Query: 161 DAVQNALLLNETELHGRQLKV 181
DAVQ AL LN +EL GR+L+V
Sbjct: 327 DAVQLALKLNNSELMGRKLRV 347
>gi|345309223|ref|XP_003428805.1| PREDICTED: polyadenylate-binding protein 2-like, partial
[Ornithorhynchus anatinus]
Length = 86
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKG 151
EK E D+RSIYVGNVDY T EE++ HF CG+VNRVTIL DKF G PKG
Sbjct: 37 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 86
>gi|168017441|ref|XP_001761256.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687596|gb|EDQ73978.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 731
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 29/148 (19%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSA------TQAEKEEVDSRSI 112
D+ +MKK+L++I+ + LR QA+V KE VQ+S + +Q +E+++SRSI
Sbjct: 443 DVLEMKKKLRQIQLDMTKLRARQAEVTKE---VQNSPAAGLRTMSFESQPSQEDINSRSI 499
Query: 113 YVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKG-------------------F 152
+V NV +A T ++ HF CG +NRVT+L + G+PKG
Sbjct: 500 FVTNVHFAATQAALRAHFGGCGIINRVTLLAEPATGKPKGDLKGCPNLHDAKTSLHVDRS 559
Query: 153 AYVEFVEIDAVQNALLLNETELHGRQLK 180
A+VEF DAV+ AL L+E+ L R +K
Sbjct: 560 AFVEFATKDAVEIALTLSESSLLSRNVK 587
>gi|297829804|ref|XP_002882784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328624|gb|EFH59043.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 664
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 97 TSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYV 155
T +T E+ SR+I+V NV + T + + +HF CG V + TI+TD GQP G AY+
Sbjct: 493 TLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKCGEVLKATIVTDPATGQPSGSAYI 552
Query: 156 EFVEIDAVQNALLLNETELHGRQLKV 181
EF +A +NAL L+ T R LK+
Sbjct: 553 EFTRKEAAENALSLDGTSFMSRILKI 578
>gi|123417547|ref|XP_001305136.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886636|gb|EAX92206.1| hypothetical protein TVAG_107400 [Trichomonas vaginalis G3]
Length = 144
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Query: 60 LEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDY 119
+ +++KRL I + E QA + + Q+++ + EK + D SI+VGN+D
Sbjct: 5 IAELRKRLDAIVQN-NKKEEDQAPIVPVVPQAQNTAEAENAEVEKPK-DENSIWVGNLDA 62
Query: 120 ACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL-LLNETELHGRQ 178
+ T E+++ HF CG + ++TI T + +AY+EF +A Q A+ LN GR
Sbjct: 63 SVTQEKLENHFSCCGKIKKLTIPTKQNPHAPKYAYIEFDSKEAAQLAIDSLNNHLFSGRN 122
Query: 179 LKVSAKRTNIPGMKQ-FRGRR 198
L + KR N PGM++ FR R
Sbjct: 123 LNIKPKRENRPGMRRSFRRSR 143
>gi|323354513|gb|EGA86350.1| Sgn1p [Saccharomyces cerevisiae VL3]
gi|365765027|gb|EHN06542.1| Sgn1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 141
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
A + E DSRSI+VGN+ TPE+++ HF+ CG + R+T+L D+ G PKG+ Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 161 DAVQNALLLNETELHGRQ 178
+ AL LN EL G++
Sbjct: 116 AYREKALQLNGGELKGKK 133
>gi|357162450|ref|XP_003579415.1| PREDICTED: uncharacterized protein LOC100842396 [Brachypodium
distachyon]
Length = 641
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
++ D+K +LK++E + LR QA++ S S + ++ DSR++ V NV
Sbjct: 460 EMLDVKLKLKQMELDMLKLRSKQAQINNGKQGAPPSGPNSNLE---DDADSRTVLVTNVH 516
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
+A T E + HF CG V + +LTD G PKG A+V F + +++ A+ L+ T + R
Sbjct: 517 FAATKEALSTHFMKCGRVLKNIVLTDANTGHPKGAAFVTFADKESIGRAISLSGTSFYSR 576
Query: 178 QLKVSAKRTNIPGM 191
L V K PG
Sbjct: 577 VLTVVRKAEAPPGF 590
>gi|224104037|ref|XP_002313291.1| predicted protein [Populus trichocarpa]
gi|222849699|gb|EEE87246.1| predicted protein [Populus trichocarpa]
Length = 762
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
E+ DSR+I+V NV +A T + + +HF G V +V I+TD GQP G AYVEF+ +A
Sbjct: 541 EDADSRTIFVSNVHFAATKDSLSRHFNKFGEVLKVVIVTDAATGQPTGSAYVEFMHKEAA 600
Query: 164 QNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFR 205
NAL L+ T R LKV T + KQ+ +F FR
Sbjct: 601 DNALSLDGTSFMSRILKVMNIETILSCYKQW------SFLFR 636
>gi|323337227|gb|EGA78481.1| Sgn1p [Saccharomyces cerevisiae Vin13]
Length = 166
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
A + E DSRSI+VGN+ TPE+++ HF+ CG + R+T+L D+ G PKG+ Y+EF
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 161 DAVQNALLLNETELHGRQ 178
+ AL LN EL G++
Sbjct: 116 AYREKALQLNGGELKGKK 133
>gi|83032973|ref|XP_729274.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23486584|gb|EAA20839.1| RNA recognition motif [Plasmodium yoelii yoelii]
Length = 77
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
R +Y GNVDY+ PEE+Q F CG +NRVTIL +K G KG+AY+EF + +V+ AL
Sbjct: 3 RYLY-GNVDYSTQPEELQSLFSECGIINRVTILVNKNTGHSKGYAYIEFADPSSVRTALS 61
Query: 169 LNETELHGRQLKVS 182
L+E+ RQ+KV
Sbjct: 62 LSESFFKKRQIKVC 75
>gi|126644829|ref|XP_001388131.1| cutinase negative acting protein [Cryptosporidium parvum Iowa II]
gi|126117359|gb|EAZ51459.1| cutinase negative acting protein, putative [Cryptosporidium parvum
Iowa II]
Length = 711
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL 167
DSR +Y GN+ Y+CT EE++ F+ CG++ RV++L+D KG A++ F + + ++A+
Sbjct: 505 DSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD-----KGCAFITFEQEEGAKSAI 559
Query: 168 LLNETELHGRQLKVS 182
N+TE GR L+++
Sbjct: 560 QWNQTEYKGRMLRIN 574
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTI--LTDKFGQPKGFAYVEFVEIDAVQNALL 168
S+ V N+ ++ E V+ F CG V RV+I +D G+ +GFA VEF + +QNAL
Sbjct: 593 SVIVRNIPFSSDDESVKSFFNGCGVVKRVSIPRYSD-TGKMRGFAMVEFENDEQIQNALK 651
Query: 169 LNETELHGRQLKV 181
L+ T ++GR++ +
Sbjct: 652 LSGTSMNGREVTI 664
>gi|413925276|gb|AFW65208.1| hypothetical protein ZEAMMB73_925630 [Zea mays]
Length = 695
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 17/124 (13%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
E+ DSR++YV NV +A T + + +HF G V +V I+T+ GQP G AYVEF+ ++
Sbjct: 531 EDADSRTLYVNNVHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESA 590
Query: 164 QNALLLNETELHGRQLKVSAKRTN-------IPGMKQFRGRRPNTFGFRGR----RPFIP 212
+ AL LN T R LKV + ++ PG R + +G GR R IP
Sbjct: 591 ERALSLNGTSFMTRILKVVRRSSHEAAHFYGWPGSG-----RSSIYGRHGRMAYPRAVIP 645
Query: 213 GVPF 216
G F
Sbjct: 646 GGSF 649
>gi|255544232|ref|XP_002513178.1| poly-A binding protein, putative [Ricinus communis]
gi|223547676|gb|EEF49169.1| poly-A binding protein, putative [Ricinus communis]
Length = 514
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 91 VQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQP 149
+Q + + AT E+ DSR+I+V NV +A T + + +HF G V +V I+ D GQP
Sbjct: 320 LQSAPGSYATGRPLEDADSRTIFVSNVHFAATKDSLSRHFNKFGDVLKVVIMADAATGQP 379
Query: 150 KGFAYVEFVEIDAVQNALLLNETELHGRQLKV----SAKRTNIPGMKQFRG---RRPNTF 202
G AY+EF+ +A NAL L+ T R LKV A + M RG P T
Sbjct: 380 MGSAYIEFMRKEAADNALSLDGTSFMSRILKVVKRSPANQEATANMIWPRGGTRGSPYTA 439
Query: 203 GFRGRRPFIPGV 214
G R PF G+
Sbjct: 440 GRFSRGPFPRGI 451
>gi|156840954|ref|XP_001643854.1| hypothetical protein Kpol_499p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114481|gb|EDO15996.1| hypothetical protein Kpol_499p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 119
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK--FGQPKGFAYVEFVE 159
+++++ D +SI+V N+ TPE + + F++CG + R+TIL DK G AYVEF
Sbjct: 15 SKRKDSDQKSIFVSNISLEITPEVIDELFRNCGDIQRITILYDKNTHSNKGGHAYVEFDS 74
Query: 160 IDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGR 197
+ + +NAL LN GR+L + KRTNIP ++ +
Sbjct: 75 VRSKENALELNGIIHEGRKLIIRPKRTNIPRFQRVNSK 112
>gi|116310267|emb|CAH67273.1| B0806H07.2 [Oryza sativa Indica Group]
gi|116310423|emb|CAH67430.1| H0305E08.1 [Oryza sativa Indica Group]
Length = 690
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNA 166
DSR++++ NV +A T + + +HF G V + I+TD GQP G AY+EF+ ++ + A
Sbjct: 512 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 571
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMKQF---RGRRPNTFGFRGRRPFIPGVPF 216
L L+ T R LKV ++ ++ +Q RG R +TF R R P F
Sbjct: 572 LTLDNTSFMSRMLKV-VRKNSLEVSQQSGWPRGSRGSTFPSRLTRTAYPRPAF 623
>gi|38344812|emb|CAE02868.2| OSJNBb0022F23.5 [Oryza sativa Japonica Group]
Length = 690
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNA 166
DSR++++ NV +A T + + +HF G V + I+TD GQP G AY+EF+ ++ + A
Sbjct: 512 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 571
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMKQF---RGRRPNTFGFRGRRPFIPGVPF 216
L L+ T R LKV ++ ++ +Q RG R +TF R R P F
Sbjct: 572 LTLDNTSFMSRMLKV-VRKNSLEVSQQSGWPRGSRGSTFPSRLTRTAYPRPAF 623
>gi|242082291|ref|XP_002445914.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
gi|241942264|gb|EES15409.1| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor]
Length = 694
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 17/124 (13%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
E+ DSR++YV NV +A T + + +HF G V +V I+T+ GQP G AYVEF+ ++
Sbjct: 530 EDADSRTLYVSNVHFAATKDSLSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESA 589
Query: 164 QNALLLNETELHGRQLKVSAKRTN-------IPGMKQFRGRRPNTFGFRGR----RPFIP 212
+ AL LN T R LKV + ++ PG R + +G GR R +P
Sbjct: 590 ERALSLNGTSFMTRILKVVRRSSHEAAHFYGWPG-----SGRSSLYGRHGRMAYPRAVLP 644
Query: 213 GVPF 216
G F
Sbjct: 645 GGSF 648
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL 167
DSR +Y GN+ Y+CT EE++ F+ CG++ RV++L+D KG A++ F + + ++A+
Sbjct: 269 DSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD-----KGCAFITFEQEEGAKSAI 323
Query: 168 LLNETELHGRQLKVS 182
N+TE GR L+++
Sbjct: 324 QWNQTEYKGRMLRIN 338
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT-DKFGQPKGFAYVEFVEIDAVQNALLL 169
S+ V N+ ++ E ++ F CG V RV+I G+ +GFA VEF + +QNAL L
Sbjct: 357 SVIVRNIPFSSDDESIKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKL 416
Query: 170 NETELHGRQLKV 181
+ T ++GR++ +
Sbjct: 417 SGTSMNGREVTI 428
>gi|357514871|ref|XP_003627724.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355521746|gb|AET02200.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 815
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 83 KVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 142
KV ++ + +SA ++ DSR+I+ NV +A T + + +HF G V + I+
Sbjct: 611 KVTQKAQPSTPGTGSSAASCPLDDADSRTIFASNVHFAATKDAICRHFNKFGEVLKAVIV 670
Query: 143 TDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRT 186
TD G+PKG AYVEF+ +A NAL L+ T R LKV K T
Sbjct: 671 TDSITGKPKGAAYVEFMYKEAADNALSLDGTSFMSRILKVVRKST 715
>gi|357164112|ref|XP_003579952.1| PREDICTED: uncharacterized protein LOC100837530 [Brachypodium
distachyon]
Length = 689
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
DSR+++V NV +A T + + +HF G V + I+TD GQP G AY+EF++ ++ + A
Sbjct: 510 DSRTVFVNNVHFAATKDALSRHFNKFGAVLKTLIVTDGVTGQPTGSAYIEFLQKESAEQA 569
Query: 167 LLLNETELHGRQLKV----SAKRTNIPGMKQFRGRRPNTFGFRG-----RRPFIPG 213
L LN T R LKV S + +PG R R + F R RP PG
Sbjct: 570 LTLNGTSFMSRILKVVRRSSVEVPQLPGWS--RASRGSPFASRLIRTAYPRPMFPG 623
>gi|125548679|gb|EAY94501.1| hypothetical protein OsI_16274 [Oryza sativa Indica Group]
Length = 429
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNA 166
DSR++++ NV +A T + + +HF G V + I+TD GQP G AY+EF+ ++ + A
Sbjct: 251 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 310
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMKQF---RGRRPNTFGFRGR-----RPFIPGV 214
L L+ T R LKV ++ ++ +Q RG R +TF R RP PG
Sbjct: 311 LTLDNTSFMSRMLKV-VRKNSLEVSQQSGWPRGSRGSTFPSRLTRTAYPRPAFPGA 365
>gi|355715678|gb|AES05401.1| RNA binding motif protein 34 [Mustela putorius furo]
Length = 398
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG++ V I+ D+ G +GF YV F
Sbjct: 249 SETSSRDKRSVFVGNLPYKIEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGYVLFENT 308
Query: 161 DAVQNALLLNETELHGRQLKV-------SAKRTNIPGMKQFRGRRPNTFGF 204
DAV AL LN +EL GR+L+V K + PG+K +PN G
Sbjct: 309 DAVHLALKLNNSELMGRKLRVMRSVNKEKLKSNSNPGLKNV--SKPNKQGL 357
>gi|384245524|gb|EIE19017.1| hypothetical protein COCSUDRAFT_67932 [Coccomyxa subellipsoidea
C-169]
Length = 596
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQ-----AKVEKEMGAVQDSSSTSATQAEKEEVDSRSIY 113
DL MK+++ E++E+ L Q A GA+ + +A VD RS++
Sbjct: 382 DLAQMKRKMLELQEQVRLLEAQQRTGALAGTMAAPGAI-GAVGPAAAPLSLPPVDPRSVH 440
Query: 114 VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETE 173
V V PE + HF CG V VTI D G +GFA+VEF NALLL+ +
Sbjct: 441 VQGVSPLAVPEVIAAHFSGCGRVINVTIGRDMQGMSRGFAHVEFSNELEAHNALLLSGSI 500
Query: 174 LHGRQLKVSAKRTNIPGMKQ---FRGR---RPNTFGFRGRRPFIPGVPFVP 218
L + + V+ K P RGR P F GR GVPF P
Sbjct: 501 LLQQPITVTPKMNRPPPSLTPHYGRGRGGFGPAAFPGAGR-----GVPFSP 546
>gi|332812270|ref|XP_514284.3| PREDICTED: RNA-binding protein 34 isoform 2 [Pan troglodytes]
gi|410225796|gb|JAA10117.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410267564|gb|JAA21748.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410289770|gb|JAA23485.1| RNA binding motif protein 34 [Pan troglodytes]
Length = 430
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG++ V I+ DK G KGF YV F
Sbjct: 279 SETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENT 338
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 339 DSVHLALKLNNSELMGRKLRV 359
>gi|47230518|emb|CAF99711.1| unnamed protein product [Tetraodon nigroviridis]
Length = 172
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 66 RLKEIEE-EAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
RLKE E EAG L+ M + + + T E+ + D+RS+YVGNVDY T +
Sbjct: 20 RLKEDERCEAGELQLMTC-------SPRPGPFYNMTPEERIDADNRSVYVGNVDYGATAD 72
Query: 125 EVQQHFQSCGTVNRVTILTDKF-GQPKGFA 153
E++ HF CG VNRVTIL D+F G PKGF
Sbjct: 73 ELEIHFNGCGPVNRVTILCDRFSGHPKGFC 102
>gi|395849832|ref|XP_003797517.1| PREDICTED: RNA-binding protein 34, partial [Otolemur garnettii]
Length = 406
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG + V I+ D+ G KGF YV F
Sbjct: 259 SETSSRDKRSVFVGNLPYKVEESVVEKHFLDCGNIVAVRIVRDQATGLGKGFGYVLFENT 318
Query: 161 DAVQNALLLNETELHGRQLKVS--------AKRTNIPGMKQFR 195
DAV AL LN +EL GR+L+V ++T+ PG+K R
Sbjct: 319 DAVHLALKLNNSELMGRKLRVMRCVNKEKLKQQTSNPGLKNVR 361
>gi|125590709|gb|EAZ31059.1| hypothetical protein OsJ_15147 [Oryza sativa Japonica Group]
Length = 494
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNA 166
DSR++++ NV +A T + + +HF G V + I+TD GQP G AY+EF+ ++ + A
Sbjct: 316 TDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQA 375
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMKQF---RGRRPNTFGFRGR-----RPFIPG 213
L L+ T R LKV ++ ++ +Q RG R +TF R RP PG
Sbjct: 376 LTLDNTSFMSRMLKV-VRKNSLEVSQQSGWPRGSRGSTFPSRLTRTAYPRPAFPG 429
>gi|238859597|ref|NP_055829.2| RNA-binding protein 34 isoform 1 [Homo sapiens]
gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|119590412|gb|EAW70006.1| RNA binding motif protein 34, isoform CRA_b [Homo sapiens]
gi|306921633|dbj|BAJ17896.1| RNA binding motif protein 34 [synthetic construct]
Length = 430
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y +++HF CG++ V I+ DK G KGF YV F
Sbjct: 279 SETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENT 338
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 339 DSVHLALKLNNSELMGRKLRV 359
>gi|395728858|ref|XP_003775451.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Pongo
abelii]
Length = 1815
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG++ V I+ DK G KGF YV F
Sbjct: 1664 SETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENT 1723
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 1724 DSVHLALKLNNSELMGRKLRV 1744
>gi|397508184|ref|XP_003824546.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Pan
paniscus]
Length = 459
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG++ V I+ DK G KGF YV F
Sbjct: 308 SETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENT 367
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 368 DSVHLALKLNNSELMGRKLRV 388
>gi|20809545|gb|AAH29451.1| RNA binding motif protein 34 [Homo sapiens]
gi|312151154|gb|ADQ32089.1| RNA binding motif protein 34 [synthetic construct]
Length = 425
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y +++HF CG++ V I+ DK G KGF YV F
Sbjct: 274 SETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENT 333
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 334 DSVHLALKLNNSELMGRKLRV 354
>gi|158258156|dbj|BAF85051.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y +++HF CG++ V I+ DK G KGF YV F
Sbjct: 274 SETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENT 333
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 334 DSVHLALKLNNSELMGRKLRV 354
>gi|440302481|gb|ELP94788.1| RNA-binding protein SGN1, putative [Entamoeba invadens IP1]
Length = 191
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAV 163
++E D+RSI V N+DY+ T E+++Q F + G V VTI DK G+PK +AY+E +++
Sbjct: 57 QKERDNRSICVRNLDYSITKEQLEQLFSTVGDVKTVTIPVDKAGKPKAYAYIELDSVESR 116
Query: 164 QNALL-LNETELHGRQLKVSAKRTNIPGMKQ 193
+ A+ L ++L+ R++ V KRTN G+ +
Sbjct: 117 ERAVTSLTGSKLNDREITVEKKRTNKMGLAK 147
>gi|426334252|ref|XP_004028672.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Gorilla
gorilla gorilla]
Length = 1500
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y +++HF CG++ V I+ DK G KGF YV F
Sbjct: 1349 SETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENT 1408
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 1409 DSVHLALKLNNSELMGRKLRV 1429
>gi|413952636|gb|AFW85285.1| hypothetical protein ZEAMMB73_728520 [Zea mays]
Length = 105
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 28/115 (24%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+++EH+VYG EIP VD D D DA ++L++MK
Sbjct: 2 EDEEHEVYGQEIP--------VD------GEDVDMSAGDDA---------TKLQELDEMK 38
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDY 119
+RLKE+EEEA ALREMQAKV K+M QD ++T T KEE+DSRS++VGNV +
Sbjct: 39 RRLKEMEEEAAALREMQAKVAKDM---QDPNAT--TSENKEEMDSRSVFVGNVSF 88
>gi|332236264|ref|XP_003267324.1| PREDICTED: RNA-binding protein 34 [Nomascus leucogenys]
Length = 430
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D RS++VGN+ Y V++HF CG++ V I+ DK G KGF YV F D+V A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLDCGSILAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 344
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+L+V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|383872573|ref|NP_001244577.1| RNA-binding protein 34 [Macaca mulatta]
gi|380810788|gb|AFE77269.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
gi|383416755|gb|AFH31591.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
Length = 427
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG+V V I+ D+ G KGF YV F
Sbjct: 279 SETSSRDKRSVFVGNLPYKVAESAVEKHFLDCGSVMAVRIVRDQVTGIGKGFGYVLFENT 338
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 339 DSVHLALKLNNSELMGRKLRV 359
>gi|119590411|gb|EAW70005.1| RNA binding motif protein 34, isoform CRA_a [Homo sapiens]
Length = 459
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y +++HF CG++ V I+ DK G KGF YV F
Sbjct: 308 SETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENT 367
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 368 DSVHLALKLNNSELMGRKLRV 388
>gi|52345686|ref|NP_001004890.1| RNA binding motif protein 34 [Xenopus (Silurana) tropicalis]
gi|49523226|gb|AAH75294.1| MGC88935 protein [Xenopus (Silurana) tropicalis]
Length = 412
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RS ++GN+ Y E V+ HF CG V V I+ D K G KGF YV F DAVQ A
Sbjct: 269 NKRSAFIGNLPYEIEEEAVRDHFSECGKVQGVRIIRDQKTGIGKGFGYVLFESADAVQLA 328
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+++V
Sbjct: 329 LKLNNSELSGRKIRV 343
>gi|89266850|emb|CAJ83915.1| novel protein containing RNA recognition motifs. (a.k.a. RRM, RBD,
or RNP domain) [Xenopus (Silurana) tropicalis]
Length = 406
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RS ++GN+ Y E V+ HF CG V V I+ D K G KGF YV F DAVQ A
Sbjct: 269 NKRSAFIGNLPYEIEEEAVRDHFSECGKVQGVRIIRDQKTGIGKGFGYVLFESADAVQLA 328
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+++V
Sbjct: 329 LKLNNSELSGRKIRV 343
>gi|293332605|ref|NP_001170249.1| uncharacterized protein LOC100384205 [Zea mays]
gi|224034597|gb|ACN36374.1| unknown [Zea mays]
gi|413952638|gb|AFW85287.1| hypothetical protein ZEAMMB73_728520 [Zea mays]
Length = 127
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 66/113 (58%), Gaps = 28/113 (24%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
+++EH+VYG EIP VD D D DA E L++MK
Sbjct: 2 EDEEHEVYGQEIP--------VD------GEDVDMSAGDDATKLQE---------LDEMK 38
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
+RLKE+EEEA ALREMQAKV K+M QD ++T T KEE+DSRS++VGNV
Sbjct: 39 RRLKEMEEEAAALREMQAKVAKDM---QDPNAT--TSENKEEMDSRSVFVGNV 86
>gi|402858632|ref|XP_003893797.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive domain-containing
protein 4B, partial [Papio anubis]
Length = 1816
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG+V V I+ D+ G KGF YV F
Sbjct: 1666 SETSSRDKRSVFVGNLPYKVAESAVEKHFLDCGSVMAVRIVRDQVTGIGKGFGYVLFENT 1725
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 1726 DSVHLALKLNNSELMGRKLRV 1746
>gi|313228854|emb|CBY18005.1| unnamed protein product [Oikopleura dioica]
Length = 314
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 49 NEEDPNANSKDLEDMKKRLKEIEEEAGALREMQA----KVEKEMGAVQDSSSTSA-TQAE 103
N P S D+ +KK+L +E E LREM K+E + A ++ S A Q
Sbjct: 158 NTAKPADKSSDINSLKKKLAMMERETSRLREMHKLRLKKLETKQRAQEERSKRDAEIQRR 217
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD--KFGQPKGFAYVEFVEID 161
++E D+R+IYV N++ T ++++ HF G + R+ + D G +GF ++ F +
Sbjct: 218 QDEEDARTIYVRNLNPKTTEQQLRDHFSVFGAIKRIVLPQDAHAIGSNRGFTFITFAGKE 277
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNIPG 190
V+ A L+ T LH R +KV K TN+ G
Sbjct: 278 PVEVACSLDGTLLHERSIKVVPK-TNMMG 305
>gi|344278331|ref|XP_003410948.1| PREDICTED: RNA-binding protein 34 [Loxodonta africana]
Length = 433
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG+V V I+ D+ G KGF YV F
Sbjct: 282 SETSSRDKRSVFVGNLPYKIEESMVEKHFLDCGSVVAVRIVRDQVTGVGKGFGYVLFENT 341
Query: 161 DAVQNALLLNETELHGRQLKV 181
DAV AL LN +EL GR+L+V
Sbjct: 342 DAVHLALKLNNSELMGRKLRV 362
>gi|45185960|ref|NP_983676.1| ACR274Wp [Ashbya gossypii ATCC 10895]
gi|74694749|sp|Q75BJ7.1|NOP12_ASHGO RecName: Full=Nucleolar protein 12
gi|44981750|gb|AAS51500.1| ACR274Wp [Ashbya gossypii ATCC 10895]
Length = 426
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 39/216 (18%)
Query: 2 EQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLE 61
E+ + E V+ G +P E D V ++ + + ++E++E+ A +E
Sbjct: 130 EELAKAERTVFVGNVPHEAITDKKV----YKEFKQLVAQRKLSKEDEDDEEQKAEKYAVE 185
Query: 62 DMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDS------------ 109
++ R EE AL A V++++ +DS + AEKE V +
Sbjct: 186 SIRFRSIAFEE---ALPRKVAFVQQKLHHTRDSVNAYVVYAEKEAVTAACKLNGSVFHDH 242
Query: 110 ----------------RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGF 152
RS++VGN+D+ + E + +HF SCG + V I+ D K KGF
Sbjct: 243 HLRFDSVAHPAPHDRKRSVFVGNLDFEESEESLWKHFMSCGPIEYVRIVRDPKTNVGKGF 302
Query: 153 AYVEFVEIDAVQNALLLNETEL---HGRQLKVSAKR 185
AYV+F ++ +V ALLLN+ ++ GR+L+V+ R
Sbjct: 303 AYVQFADLVSVNKALLLNDKKMAVGKGRKLRVTRCR 338
>gi|374106883|gb|AEY95792.1| FACR274Wp [Ashbya gossypii FDAG1]
Length = 426
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 39/216 (18%)
Query: 2 EQHDEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLE 61
E+ + E V+ G +P E D V ++ + + ++E++E+ A +E
Sbjct: 130 EELAKAERTVFVGNVPHEAITDKKV----YKEFKQLVAQRKLSKEDEDDEEQKAEKYAVE 185
Query: 62 DMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDS------------ 109
++ R EE AL A V++++ +DS + AEKE V +
Sbjct: 186 SIRFRSIAFEE---ALPRKVAFVQQKLHHTRDSVNAYVVYAEKEAVTAACKLNGSVFHDH 242
Query: 110 ----------------RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGF 152
RS++VGN+D+ + E + +HF SCG + V I+ D K KGF
Sbjct: 243 HLRFDSVAHPAPHDRKRSVFVGNLDFEESEESLWKHFMSCGPIEYVRIVRDPKTNVGKGF 302
Query: 153 AYVEFVEIDAVQNALLLNETEL---HGRQLKVSAKR 185
AYV+F ++ +V ALLLN+ ++ GR+L+V+ R
Sbjct: 303 AYVQFADLVSVNKALLLNDKKMAVGKGRKLRVTRCR 338
>gi|194042563|ref|XP_001925470.1| PREDICTED: RNA-binding protein 34 [Sus scrofa]
Length = 424
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG+V V I+ D G +GF YV F
Sbjct: 275 SETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSVVAVRIVRDPVTGVGRGFGYVLFENT 334
Query: 161 DAVQNALLLNETELHGRQLKV-------SAKRTNIPGMK 192
DAV AL LN +EL GR+L+V K+ + PG+K
Sbjct: 335 DAVHLALKLNNSELMGRKLRVMRSIHKEKLKQNSNPGLK 373
>gi|440901028|gb|ELR52037.1| RNA-binding protein 34 [Bos grunniens mutus]
Length = 428
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D RS++VGN+ Y V++HF +CG V V I+ D+ G +GF YV F DAV A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLFENTDAVHLA 344
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+L+V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|432843238|ref|XP_004065582.1| PREDICTED: RNA-binding protein 34-like [Oryzias latipes]
Length = 421
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 9/116 (7%)
Query: 70 IEEEAGALREMQA---KVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEV 126
+EEAGA+R +++ +VE D ++ ++ K RS++VGN+ + +
Sbjct: 226 FKEEAGAIRALESNGMEVETNYNIRVDRATDGSSHDHK-----RSVFVGNLPFDIHEQAF 280
Query: 127 QQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
++HF++CGTV V ++ DK G KGF YV F D+VQ AL LN ++L GR ++V
Sbjct: 281 RKHFETCGTVEAVRLVRDKDSGLGKGFGYVLFESADSVQLALELNASKLEGRSIRV 336
>gi|365989592|ref|XP_003671626.1| hypothetical protein NDAI_0H02090 [Naumovozyma dairenensis CBS 421]
gi|343770399|emb|CCD26383.1| hypothetical protein NDAI_0H02090 [Naumovozyma dairenensis CBS 421]
Length = 128
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGT-VNRVTILTDKFGQPKGFAYVEFVEI 160
AE+ + DSRSI+V N+ TPE+++ HF+ G + R+T+ TD+ KG AY+EF +
Sbjct: 26 AEQLDADSRSIFVNNISIDMTPEQIESHFKEFGNHIVRITLFTDR--HSKGCAYIEFDNV 83
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
+ + AL N T +G + V KRTN+P K+
Sbjct: 84 EVRELALNSNGTPFNGSVIGVFRKRTNLPKFKR 116
>gi|388627|gb|AAA28862.1| putative, partial [Drosophila melanogaster]
Length = 48
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF 157
S+YVGNVDY + EE++ HF CGT+NRVTIL +K G PKGFAY+EF
Sbjct: 1 SVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEF 48
>gi|301782455|ref|XP_002926642.1| PREDICTED: RNA-binding protein 34-like [Ailuropoda melanoleuca]
Length = 430
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D RS++VGN+ Y V++HF CG++ V I+ D+ G +GF YV F DAV A
Sbjct: 287 DKRSVFVGNLPYKVEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLA 346
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+L+V
Sbjct: 347 LKLNNSELMGRKLRV 361
>gi|426255548|ref|XP_004021410.1| PREDICTED: RNA-binding protein 34 [Ovis aries]
Length = 427
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D RS++VGN+ Y V++HF +CG V V I+ D+ G +GF YV F DAV A
Sbjct: 284 DKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLFENTDAVHLA 343
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+L+V
Sbjct: 344 LKLNNSELMGRKLRV 358
>gi|281341646|gb|EFB17230.1| hypothetical protein PANDA_016323 [Ailuropoda melanoleuca]
Length = 428
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D RS++VGN+ Y V++HF CG++ V I+ D+ G +GF YV F DAV A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGYVLFENTDAVHLA 344
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+L+V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|414869375|tpg|DAA47932.1| TPA: hypothetical protein ZEAMMB73_433523 [Zea mays]
Length = 694
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 79 EMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNR 138
E+Q ++ +V S STS + DSR++YV NV +A T + + +HF G V +
Sbjct: 507 EVQKDSQRSAPSVPVSYSTSHPTVD---ADSRTLYVSNVHFAATKDSLSRHFNKFGAVLK 563
Query: 139 VTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
V I+T+ GQP G AYVEF+ ++ + AL LN T R LKV
Sbjct: 564 VVIVTNAATGQPTGSAYVEFLHKESAERALSLNGTSFMTRILKV 607
>gi|345798762|ref|XP_536341.3| PREDICTED: RNA-binding protein 34 [Canis lupus familiaris]
Length = 428
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG++ V I+ D+ G +GF YV F
Sbjct: 278 SETSSRDKRSVFVGNLPYKVEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGYVLFENT 337
Query: 161 DAVQNALLLNETELHGRQLKV 181
DAV AL LN +EL GR+L+V
Sbjct: 338 DAVHLALKLNNSELMGRKLRV 358
>gi|67469403|ref|XP_650680.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56467330|gb|EAL45294.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449708457|gb|EMD47913.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 135
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 83 KVEKEMGAV-QDSSSTSATQAEKE-EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 140
K+EKE V +D+ + + E E E++SRS++V NV+Y T EE++ F+ CG V +V
Sbjct: 10 KLEKEWRTVHKDNVNKEYIRHEIEKELNSRSVHVSNVEYTTTKEELEDLFERCGVVLKVN 69
Query: 141 ILTDKFGQPK-GFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRT 186
I ++F Q G+A +EF +AV+ A+ L T L+GR ++VS K T
Sbjct: 70 IPINQFTQTTMGYANIEFKNSNAVEKAIKLTGTNLNGRYIEVSKKIT 116
>gi|167392444|ref|XP_001740157.1| RNA-binding protein SGN1 [Entamoeba dispar SAW760]
gi|165895835|gb|EDR23424.1| RNA-binding protein SGN1, putative [Entamoeba dispar SAW760]
Length = 135
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAV 163
+E+DSRSI+V NV+Y+ T ++++ F+ CG + V I + F Q P G+A +EF +A+
Sbjct: 34 KELDSRSIHVSNVEYSTTKDDLEDLFEKCGIILNVNIPINYFTQTPMGYANIEFKNSNAI 93
Query: 164 QNALLLNETELHGRQLKVSAKRT 186
+ AL L+ T L+GR ++VS K T
Sbjct: 94 EKALKLSGTYLNGRYIEVSKKIT 116
>gi|407041600|gb|EKE40843.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 135
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 83 KVEKEMGAV-QDSSSTSATQAEKE-EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 140
K+EKE V +D+ + + E E E+DSRS++V NV+Y T EE++ F+ CG V +V
Sbjct: 10 KLEKEWRTVHKDNVNKEYIRHEIEKELDSRSVHVSNVEYTTTKEELEDLFERCGVVLKVN 69
Query: 141 ILTDKFGQPK-GFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRT 186
I ++ Q G+A +EF +AV+ A+ L T L+GR ++VS K T
Sbjct: 70 IPINQLTQKTMGYANIEFKNSNAVEKAIKLTGTNLNGRYIEVSKKIT 116
>gi|395531593|ref|XP_003767862.1| PREDICTED: RNA-binding protein 34 [Sarcophilus harrisii]
Length = 438
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL 168
RS++VGN+ Y +Q+HF CG+V V ++ +K G KG YV F DAVQ AL
Sbjct: 294 RSVFVGNLPYKIEETAIQEHFSDCGSVLAVKLVRNKVTGIGKGCGYVLFENTDAVQLALK 353
Query: 169 LNETELHGRQLKV-------SAKRTNIPG 190
LN +EL GR+L+V AK ++ PG
Sbjct: 354 LNNSELMGRKLRVKRYVNNEKAKLSHTPG 382
>gi|413924474|gb|AFW64406.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 101
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 68/113 (60%), Gaps = 21/113 (18%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
D++EH+VYG EIP+ D D+D + + D A ++L++MK
Sbjct: 2 DDEEHEVYGQEIPE--DGDMDGADVDMAAAGDD----------------AAKLQELDEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNV 117
++LKE+EEEA ALR+MQAKV KEM S ST+ KE+VD+RS+YVGNV
Sbjct: 44 RKLKEMEEEAAALRDMQAKVAKEMQGGDPSISTAEA---KEQVDARSVYVGNV 93
>gi|255711272|ref|XP_002551919.1| KLTH0B02992p [Lachancea thermotolerans]
gi|238933297|emb|CAR21481.1| KLTH0B02992p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 70 IEEEAGALREMQAKVEKEMG-AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQ 128
I EE L++ +EK M + ++ + D+RS+YVGN+D + E +Q+
Sbjct: 33 ITEETSRLKD----IEKRMAENAHGAGCPGFSRFNDQSADARSVYVGNLDPSINAETLQE 88
Query: 129 HFQ-SCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRT 186
F+ S VNRV I +K G KGFA+VEF + V +A+ L+ T+L G+ LK+ KR
Sbjct: 89 FFKGSVSRVNRVEIQINKLTGFAKGFAFVEFAQPRDVMDAIKLSNTKLGGKPLKIVPKRP 148
Query: 187 NI----PGMKQFRGRRPNT 201
+ P R RR T
Sbjct: 149 SFHQESPNRGSHRMRRATT 167
>gi|147898640|ref|NP_001085272.1| RNA binding motif protein 34 [Xenopus laevis]
gi|62185676|gb|AAH92323.1| LOC443584 protein [Xenopus laevis]
Length = 414
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RS +VGN+ Y E +++HF CG V V I+ D K G KGF YV F DAVQ A
Sbjct: 271 NKRSAFVGNLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLA 330
Query: 167 LLLNETELHGRQLKV--------SAKRTNIPGMKQ 193
L LN ++L GR+++V + K TN KQ
Sbjct: 331 LKLNNSQLSGRRIRVKRSVTAEAAQKSTNKTSFKQ 365
>gi|296230931|ref|XP_002760846.1| PREDICTED: RNA-binding protein 34 [Callithrix jacchus]
Length = 429
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D RS++VGN+ Y V++HF CG++ V I+ D+ G KGF YV F D+V A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDQVTGIGKGFGYVLFENTDSVHLA 344
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+L+V
Sbjct: 345 LKLNNSELMGRKLRV 359
>gi|49114983|gb|AAH72838.1| LOC443584 protein, partial [Xenopus laevis]
Length = 403
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RS +VGN+ Y E +++HF CG V V I+ D K G KGF YV F DAVQ A
Sbjct: 271 NKRSAFVGNLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLA 330
Query: 167 LLLNETELHGRQLKV 181
L LN ++L GR+++V
Sbjct: 331 LKLNNSQLSGRRIRV 345
>gi|334322146|ref|XP_001378610.2| PREDICTED: RNA-binding protein 34-like [Monodelphis domestica]
Length = 510
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL 168
RS++VGN+ Y +Q+HF CG+V V I+ +K G KG YV F DAVQ AL
Sbjct: 275 RSVFVGNLPYKIEEAAIQEHFSDCGSVLAVKIVRNKVTGVGKGCGYVLFENTDAVQLALR 334
Query: 169 LNETELHGRQLKV 181
LN +EL GR+L+V
Sbjct: 335 LNNSELMGRKLRV 347
>gi|146331996|gb|ABQ22504.1| RNA-binding protein 34-like protein [Callithrix jacchus]
Length = 220
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D RS++VGN+ Y V++HF CG++ V I+ D+ G KGF YV F D+V A
Sbjct: 76 DKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDQVTGIGKGFGYVLFENTDSVHLA 135
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+L+V
Sbjct: 136 LKLNNSELMGRKLRV 150
>gi|327262180|ref|XP_003215903.1| PREDICTED: RNA-binding protein 34-like [Anolis carolinensis]
Length = 377
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RS++VGN+ YA + V+ HF CG V V I+ D + G KGF YV F DAV A
Sbjct: 234 NKRSVFVGNLPYAIDDDTVRTHFSQCGNVMGVRIVRDQRTGIGKGFGYVLFETTDAVHLA 293
Query: 167 LLLNETELHGRQLKV 181
L LN EL GR+L+V
Sbjct: 294 LKLNNAELEGRKLRV 308
>gi|403216662|emb|CCK71158.1| hypothetical protein KNAG_0G01000 [Kazachstania naganishii CBS
8797]
Length = 131
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPK-GFAYVEFVEID 161
++ E D+RSI+V + PE ++ HF++CG ++R+T+ + K + G+AY+EF +
Sbjct: 34 QRAEADTRSIFVRGLSPETGPEVIEDHFKACGPISRITLFSQKRKRNTIGYAYIEFEAVQ 93
Query: 162 AVQNALLLNETELHGRQLKVSAKRTNI 188
NAL LN + L+G + V KRTN+
Sbjct: 94 GRANALDLNNSILNGYSITVKKKRTNV 120
>gi|351694564|gb|EHA97482.1| RNA-binding protein 34 [Heterocephalus glaber]
Length = 428
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS+++GN+ Y V++HF CG++ V I+ D G KGF YV F
Sbjct: 277 SETSSRDKRSVFIGNLPYKVEETAVEEHFLDCGSIVAVRIVRDPVTGVGKGFGYVLFENT 336
Query: 161 DAVQNALLLNETELHGRQLKV 181
DAV AL LN +EL GR+L+V
Sbjct: 337 DAVHLALKLNNSELMGRKLRV 357
>gi|294924689|ref|XP_002778856.1| Embryonic polyadenylate-binding protein 2-B, putative [Perkinsus
marinus ATCC 50983]
gi|239887665|gb|EER10651.1| Embryonic polyadenylate-binding protein 2-B, putative [Perkinsus
marinus ATCC 50983]
Length = 94
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 142 LTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPG 190
+ DK+ G PKGFAY+EF + AVQNALLLN+T GRQLKV KRTN+PG
Sbjct: 1 MVDKYSGHPKGFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 50
>gi|326520627|dbj|BAK07572.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 502
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 90 AVQDSSSTSATQAEKEEV-DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFG 147
A + SS + + E DSR+++V NV + T + + HF G V + I++D G
Sbjct: 303 ATKASSVVGGSTGQPESAPDSRTVFVSNVHFGATKDGLSCHFNKFGAVLKTLIVSDGATG 362
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRT-NIPGMKQF-RGRRPNTFGFR 205
QP G AY+EF+E ++ + AL LN T R LKV K + +P + RG R + F R
Sbjct: 363 QPTGSAYIEFLEKESAEKALTLNGTSFMSRILKVVRKSSVEVPQQPAWSRGVRASPFASR 422
Query: 206 -----GRRPFIPGV 214
RP PG
Sbjct: 423 LIRTAYPRPTFPGA 436
>gi|11994405|dbj|BAB02407.1| unnamed protein product [Arabidopsis thaliana]
Length = 662
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 82 AKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 141
A V++E + T +T E+ SR+I+V NV + T + + +HF G V + I
Sbjct: 476 ASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFI 535
Query: 142 LTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
+TD GQP G AY+EF +A +NAL L+ T R LK+
Sbjct: 536 VTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKI 576
>gi|12321948|gb|AAG51005.1|AC069474_4 unknown protein; 13339-10119 [Arabidopsis thaliana]
Length = 674
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 82 AKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 141
A V++E + T +T E+ SR+I+V NV + T + + +HF G V + I
Sbjct: 488 ASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFI 547
Query: 142 LTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
+TD GQP G AY+EF +A +NAL L+ T R LK+
Sbjct: 548 VTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKI 588
>gi|417410496|gb|JAA51720.1| Putative splicing factor, partial [Desmodus rotundus]
Length = 412
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V+ HF CG + V I+ D G +GF YV F
Sbjct: 263 SETSSRDKRSVFVGNLPYKVGESAVEHHFLDCGNIVAVRIVRDPLTGVGRGFGYVLFENT 322
Query: 161 DAVQNALLLNETELHGRQLKV 181
DAV AL LN +EL GR+L+V
Sbjct: 323 DAVHLALKLNNSELMGRKLRV 343
>gi|410975075|ref|XP_003993961.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Felis
catus]
Length = 433
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEI 160
+E D RS++VGN+ Y +++HF CG++ V I+ D G +GF YV F
Sbjct: 284 SETSSRDKRSVFVGNLPYKVEESAIEEHFLDCGSIVAVRIVRDPATGVGRGFGYVLFENT 343
Query: 161 DAVQNALLLNETELHGRQLKV 181
DAV AL LN +EL GR+L+V
Sbjct: 344 DAVHLALKLNNSELMGRKLRV 364
>gi|194206109|ref|XP_001915106.1| PREDICTED: RNA-binding protein 34 [Equus caballus]
Length = 428
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG + V I+ D+ G +GF YV F
Sbjct: 279 SETSSRDKRSVFVGNLPYKVEESAVEEHFLDCGHIVAVRIVRDQVTGVGRGFGYVLFENT 338
Query: 161 DAVQNALLLNETELHGRQLKV 181
DAV AL LN +EL GR+L+V
Sbjct: 339 DAVHLALKLNNSELMGRKLRV 359
>gi|291402150|ref|XP_002717371.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 430
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG + V I+ D+ G KGF YV F
Sbjct: 278 SETSSRDKRSVFVGNLPYKVEETAVEEHFLDCGNIVAVRIVRDQITGIGKGFGYVLFENK 337
Query: 161 DAVQNALLLNETELHGRQLKV 181
D+V AL LN +EL GR+L+V
Sbjct: 338 DSVHLALKLNNSELMGRKLRV 358
>gi|145338423|ref|NP_566430.3| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332641706|gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 638
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 82 AKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 141
A V++E + T +T E+ SR+I+V NV + T + + +HF G V + I
Sbjct: 452 ASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFI 511
Query: 142 LTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
+TD GQP G AY+EF +A +NAL L+ T R LK+
Sbjct: 512 VTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKI 552
>gi|365982827|ref|XP_003668247.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
gi|343767013|emb|CCD23004.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 12/85 (14%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + HF+SCG + V I+ D K KGFAYV+F E+ +V ALL
Sbjct: 299 RSIFVGNLDFEEAEESLWNHFKSCGEIEYVRIIRDAKTNMGKGFAYVQFKELQSVNKALL 358
Query: 169 LN-----------ETELHGRQLKVS 182
LN +++ GR+L+V+
Sbjct: 359 LNDKVMMKSNVDKDSKKKGRKLRVT 383
>gi|431895672|gb|ELK05098.1| RNA-binding protein 34 [Pteropus alecto]
Length = 448
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V++HF CG+V V I+ D + G +GF +V F
Sbjct: 299 SETSSRDKRSVFVGNLPYKAEEPAVEEHFLDCGSVVAVRIVRDPRTGVGRGFGFVLFENT 358
Query: 161 DAVQNALLLNETELHGRQLKV 181
DAV AL LN +EL GR+L+V
Sbjct: 359 DAVHLALKLNNSELMGRKLRV 379
>gi|21592882|gb|AAM64832.1| unknown [Arabidopsis thaliana]
Length = 320
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 82 AKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 141
A V++E + T +T E+ SR+I+V NV + T + + +HF G V + I
Sbjct: 134 ASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFI 193
Query: 142 LTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
+TD GQP G AY+EF +A +NAL L+ T R LK+
Sbjct: 194 VTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKI 234
>gi|365758459|gb|EHN00299.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 460
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + +HF+SCG + V I+ D K KGFAYV+F ++++V ALL
Sbjct: 280 RSIFVGNLDFEEIEESLWKHFESCGGIEYVRIVRDSKTNMGKGFAYVQFKDLESVNKALL 339
Query: 169 LNETELHGRQ 178
LNE + ++
Sbjct: 340 LNEKPMKSQK 349
>gi|401840528|gb|EJT43313.1| NOP12-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 460
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + +HF+SCG + V I+ D K KGFAYV+F ++++V ALL
Sbjct: 280 RSIFVGNLDFEEIEESLWKHFESCGGIEYVRIVRDSKTNMGKGFAYVQFKDLESVNKALL 339
Query: 169 LNETELHGRQ 178
LNE + ++
Sbjct: 340 LNEKPMKSQK 349
>gi|354468817|ref|XP_003496847.1| PREDICTED: RNA-binding protein 34-like [Cricetulus griseus]
Length = 425
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
D RS++VGN+ Y +++HF CG++ V IL + + G +GF YV F DAV A
Sbjct: 283 DKRSVFVGNLPYKVEEAALEEHFLDCGSIVAVRILRNPQTGVGRGFGYVLFENTDAVHLA 342
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+L+V
Sbjct: 343 LKLNNSELMGRKLRV 357
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 88
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
++ IYVGN++Y+ E +Q F G VN V I+TD++ GQ KGF +VE E+DA + A+
Sbjct: 2 AKKIYVGNLNYSTREESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVEMEEMDAAEAAI 61
Query: 168 -LLNETELHGRQLKVS 182
L+ T L GR+L+V+
Sbjct: 62 SALDGTSLDGRELRVN 77
>gi|413924472|gb|AFW64404.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 96
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 21/112 (18%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
D++EH+VYG EIP+ D D+D + + D A ++L++MK
Sbjct: 2 DDEEHEVYGQEIPE--DGDMDGADVDMAAAGDD----------------AAKLQELDEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGN 116
++LKE+EEEA ALR+MQAKV KEM S ST+ KE+VD+RS+YVGN
Sbjct: 44 RKLKEMEEEAAALRDMQAKVAKEMQGGDPSISTAEA---KEQVDARSVYVGN 92
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S S++VGN+ ++ T + + + F CG++ R + TD+ G P+GFAY++F D+ +NA
Sbjct: 616 SASVFVGNLPWSMTQDWLYEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAENAT 675
Query: 168 LLNETELHGRQLKVS 182
L+ T+L GRQ++V+
Sbjct: 676 KLSGTDLEGRQIRVN 690
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNAL 167
S+S+++GN+ ++ T E ++Q F CG + RV+I TD + G+ KGFA+++F + D+ + A+
Sbjct: 511 SKSVFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAV 570
Query: 168 LLNETELHGRQLKVS 182
N + GR L+++
Sbjct: 571 GKNGEDCEGRDLRIN 585
>gi|62078761|ref|NP_001014037.1| RNA-binding protein 34 [Rattus norvegicus]
gi|76363312|sp|Q5M9F1.1|RBM34_RAT RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|56541178|gb|AAH87155.1| RNA binding motif protein 34 [Rattus norvegicus]
gi|149043245|gb|EDL96777.1| RNA binding motif protein 34 [Rattus norvegicus]
Length = 428
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 67 LKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEV 126
KE A AL+ A++ + D +S +A++ D RS++VGN+ Y +
Sbjct: 248 FKEERAAAKALQRNGAQIAEGFRIRVDLASETASR------DKRSVFVGNLPYRVDESAL 301
Query: 127 QQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
++HF CG++ V I+ + G +GF YV F DAV AL LN +EL GR+L+V
Sbjct: 302 EEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 357
>gi|401623704|gb|EJS41793.1| nop12p [Saccharomyces arboricola H-6]
Length = 470
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + +HF+SCG + V I+ D K KGFAYV+F ++ +V ALL
Sbjct: 290 RSIFVGNLDFEEIEESLWKHFESCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 349
Query: 169 LNETELHGRQ 178
LNE + ++
Sbjct: 350 LNEKPMKSQK 359
>gi|297821731|ref|XP_002878748.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324587|gb|EFH55007.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGA--VQDSSSTSATQAEKEEVDSRSIYVGN 116
+++++K++++E+E LR +Q+K K+ ++ S + +Q +++ +SR I+V N
Sbjct: 394 EIKNVKEKMQELE-----LRIIQSKQLKKQKIEELKPSPQSGESQYQQDVTESRIIHVTN 448
Query: 117 VDYACTPEEVQQHFQS-CGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLLNETEL 174
V+YA E + F S CG V VTI+TD + PKG A+V F ++V A+ L+ T
Sbjct: 449 VNYAAKKEAISMFFSSKCGAVENVTIVTDPVTRHPKGSAFVTFATKESVNQAIALSGTMF 508
Query: 175 HGRQLKV 181
+ R +KV
Sbjct: 509 YSRPIKV 515
>gi|363731894|ref|XP_423974.3| PREDICTED: RNA-binding protein 34 [Gallus gallus]
Length = 405
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNA 166
+ RS+++GN+ Y + V++HF CG V V I+ D+ G KGF YV F DAV A
Sbjct: 263 NKRSVFLGNLAYDISDSAVREHFADCGDVVAVRIVRDRQSGMGKGFGYVLFENTDAVHLA 322
Query: 167 LLLNETELHGRQLKV 181
L LN ++L GR+L+V
Sbjct: 323 LKLNNSDLMGRKLRV 337
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 93 DSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGF 152
D S T+ + D R+++V +D++CT ++V+ F+ G V V ++T G+P+GF
Sbjct: 766 DRSKTALRPKHQTGFDPRTVFVKRLDHSCTEQDVRTLFEQYGAVKEVRMVTTLAGKPRGF 825
Query: 153 AYVEF-VEIDAVQNALLLNETELHGRQLKVS 182
AYVEF DA + L++ E GRQL+V+
Sbjct: 826 AYVEFEASRDAATAIMNLDKAEFKGRQLQVA 856
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQN 165
E R+++V N+D+A + +Q F+ CG + + ++ GQ KGFAY+EF E ++
Sbjct: 686 EAAQRTVFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVRKPSGQSKGFAYIEFEEKSSLAF 745
Query: 166 ALLLNETELHGRQLKV 181
AL + ++GR + V
Sbjct: 746 ALSKDRQFMNGRPVLV 761
>gi|291220976|ref|XP_002730499.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 458
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RS+++GN+ Y E V+QHF CG V V ++ D K G KGF YV F +I +V+ AL
Sbjct: 283 RSVFIGNLPYKIDEEIVRQHFMQCGNVISVRLVRDGKTGIGKGFGYVLFKDISSVEFALK 342
Query: 169 LNETELHGRQLKVSA---KRTNIPG 190
N+ L GR++++ K N PG
Sbjct: 343 FNDKPLFGRKVRIKRSFEKEKNKPG 367
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S S++VGN+ ++ T E + + F CG++ R + TD+ G P+GFAY++F D+ + A
Sbjct: 400 SASVFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKAT 459
Query: 168 LLNETELHGRQLKV 181
L+ T+L GRQ++V
Sbjct: 460 KLSGTDLEGRQIRV 473
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNAL 167
S+S++VGN+ ++ T E ++Q F CG + RV++ TD + G+ KGFA+++F + D+ + A+
Sbjct: 293 SKSVFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADEDSAEKAV 352
Query: 168 LLNETELHGRQLKV 181
N + GR L+V
Sbjct: 353 GKNGEDCEGRDLRV 366
>gi|432106224|gb|ELK32110.1| AT-rich interactive domain-containing protein 4B [Myotis davidii]
Length = 1743
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y V+ HF CG + V I+ D G +GF YV F
Sbjct: 1594 SETSSRDKRSVFVGNLPYKIEDAVVEDHFLDCGNIVAVRIVRDPLTGVGRGFGYVLFENT 1653
Query: 161 DAVQNALLLNETELHGRQLKV 181
DAV AL LN +EL GR+L+V
Sbjct: 1654 DAVHLALKLNNSELMGRKLRV 1674
>gi|148679876|gb|EDL11823.1| RNA binding motif protein 34, isoform CRA_b [Mus musculus]
Length = 432
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
+E D RS++VGN+ Y +++HF CG++ V I+ + G +GF YV F
Sbjct: 273 SETASRDKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENT 332
Query: 161 DAVQNALLLNETELHGRQLKV 181
DAV AL LN +EL GR+L+V
Sbjct: 333 DAVHLALKLNNSELMGRKLRV 353
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAV 163
EE + +++VGN+ + E + F CGTV I+TDK G+ KGF YV F DA+
Sbjct: 178 EEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADAL 237
Query: 164 QNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRR------PNTFGFRGRRPF 210
A+ L TEL GR+++V P +GR+ P T F G F
Sbjct: 238 TAAMALTGTELDGREIRVDVSTPKPPRDGNRQGRKEAPQSAPTTTLFLGNLSF 290
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
+ ++++GN+ + T +E+++ F G + V TD+ G KGF YVE+ +++ Q A+
Sbjct: 280 TTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAV 339
Query: 168 -LLNETELHGRQLKV 181
LN E+ GR L++
Sbjct: 340 EGLNGVEIAGRSLRL 354
>gi|42794007|ref|NP_766350.2| RNA-binding protein 34 [Mus musculus]
gi|148679875|gb|EDL11822.1| RNA binding motif protein 34, isoform CRA_a [Mus musculus]
gi|187954471|gb|AAI41279.1| RNA binding motif protein 34 [Mus musculus]
Length = 442
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D RS++VGN+ Y +++HF CG++ V I+ + G +GF YV F DAV A
Sbjct: 289 DKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 348
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+L+V
Sbjct: 349 LKLNNSELMGRKLRV 363
>gi|50287177|ref|XP_446018.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691041|sp|Q6FUS6.1|NOP12_CANGA RecName: Full=Nucleolar protein 12
gi|49525325|emb|CAG58942.1| unnamed protein product [Candida glabrata]
Length = 396
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RS++VGN+D+ E + +HF +CG++ V I+ D K KGFAYV+F E+ +V ALL
Sbjct: 228 RSVFVGNLDFEEDEESLWKHFGACGSIEYVRIVRDPKTNMGKGFAYVQFNELQSVSKALL 287
Query: 169 LNETELHGRQLKVSAKRTNIPGMKQFRGRRPN 200
LNE + + + ++ + K R P
Sbjct: 288 LNEKPMISQNEHLKKRKLRVTRCKNIRKVEPT 319
>gi|440803738|gb|ELR24621.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 411
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG-QPKGFAYVEFVEIDAVQNAL 167
+R+ +VGN+ ++ EE++ HF+S GTV RV I+ D KGF +VEF D + AL
Sbjct: 248 ARAAFVGNLPFSIRDEELRSHFESAGTVKRVRIVRDSATFMGKGFGFVEFENKDDLLGAL 307
Query: 168 LLNETELHGRQLKV 181
L+E+EL GRQ++V
Sbjct: 308 SLHESELQGRQIRV 321
>gi|302310751|ref|XP_455433.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|223590101|sp|Q6CKV6.2|NOP12_KLULA RecName: Full=Nucleolar protein 12
gi|199425080|emb|CAG98141.2| KLLA0F07799p [Kluyveromyces lactis]
Length = 462
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RS++VGN+D+ E + +HF+ CG + V I+ D K KGFAYV+F + +V ALL
Sbjct: 297 RSVFVGNLDFEEVEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDFQSVSKALL 356
Query: 169 LNETELH----GRQLKVS 182
L+E ++H R+L++S
Sbjct: 357 LHEKKIHEGKKARKLRIS 374
>gi|326915530|ref|XP_003204069.1| PREDICTED: RNA-binding protein 34-like [Meleagris gallopavo]
Length = 475
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNA 166
+ RS+++GN+ Y + V++HF CG V V I+ D+ G KGF YV F DAV A
Sbjct: 255 NKRSVFLGNLAYDISDSAVREHFADCGDVVAVRIVRDRQSGMGKGFGYVLFENTDAVHLA 314
Query: 167 LLLNETELHGRQLKV 181
L LN ++L GR+L+V
Sbjct: 315 LKLNNSDLMGRKLRV 329
>gi|76363311|sp|Q8C5L7.1|RBM34_MOUSE RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|26346951|dbj|BAC37124.1| unnamed protein product [Mus musculus]
Length = 375
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
D RS++VGN+ Y +++HF CG++ V I+ + G +GF YV F DAV A
Sbjct: 289 DKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 348
Query: 167 LLLNETELHGRQLKV 181
L LN +EL GR+L+V
Sbjct: 349 LKLNNSELMGRKLRV 363
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLL 169
SI+VG + ++ + + Q F CG V+ T+ D+ G+ +GF YV F DAV+ AL +
Sbjct: 309 SIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKALKM 368
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRP----FIPGVPF 216
N E+ GR +KV + P Q R RR F P FI +PF
Sbjct: 369 NGYEIDGRAIKVDL--STPPNSNQIRERRAKVFNDEISPPSSTLFIGNLPF 417
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S ++++GN+ ++ T + + +F +V + + TD+ GQ KGF YVE ++ + A
Sbjct: 407 SSTLFIGNLPFSITEDGLWSYFDGH-SVKTIRLPTDRETGQLKGFGYVELENVEDAKKAF 465
Query: 168 -LLNETELHGRQLKV 181
++ E+ GR+++V
Sbjct: 466 EAISGQEIEGRRVRV 480
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLL 169
SI+VG + ++ + + Q F CG V+ T+ D+ G+ +GF YV F DAV+ AL +
Sbjct: 309 SIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKALKM 368
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRP----FIPGVPF 216
N E+ GR +KV + P Q R RR F P FI +PF
Sbjct: 369 NGYEIDGRAIKVDL--STPPNSNQIRERRAKVFNDEISPPSSTLFIGNLPF 417
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S ++++GN+ ++ T + + +F +V + + TD+ GQ KGF YVE ++ + A
Sbjct: 407 SSTLFIGNLPFSITEDGLWSYFDGH-SVKTIRLPTDRETGQLKGFGYVELENVEDAKKAF 465
Query: 168 -LLNETELHGRQLKV 181
++ E+ GR+++V
Sbjct: 466 EAISGQEIEGRRVRV 480
>gi|452840079|gb|EME42017.1| hypothetical protein DOTSEDRAFT_72945 [Dothistroma septosporum
NZE10]
Length = 339
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
R +++GN+ Y + E + + F SCG V ++ DK GQPKGF ++E+ + D+ Q+A+
Sbjct: 9 RVVFIGNIPYGVSEEMIMEIFSSCGKVMNFRLVYDKETGQPKGFGFLEYSDTDSAQSAIR 68
Query: 169 -LNETELHGRQLKV 181
LNE EL+GR L+V
Sbjct: 69 NLNEYELNGRTLRV 82
>gi|315042389|ref|XP_003170571.1| eukaryotic translation initiation factor 4H [Arthroderma gypseum
CBS 118893]
gi|311345605|gb|EFR04808.1| eukaryotic translation initiation factor 4H [Arthroderma gypseum
CBS 118893]
Length = 549
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++Q+ F C V V I+ DK G PKGF YVEF +D ++ AL
Sbjct: 87 TAHIGNLSFEATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 145
Query: 170 NETELHGRQLKVS 182
T L GR ++VS
Sbjct: 146 QGTSLQGRNIRVS 158
>gi|296815986|ref|XP_002848330.1| translation initiation factor 4B [Arthroderma otae CBS 113480]
gi|238841355|gb|EEQ31017.1| translation initiation factor 4B [Arthroderma otae CBS 113480]
Length = 545
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++Q+ F C V V I+ DK G PKGF YVEF +D ++ AL
Sbjct: 93 TAHIGNLSFEATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 151
Query: 170 NETELHGRQLKVS 182
T L GR ++VS
Sbjct: 152 QGTSLQGRNIRVS 164
>gi|268569444|ref|XP_002640524.1| Hypothetical protein CBG18686 [Caenorhabditis briggsae]
Length = 84
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
S+YVGNV Y + EE+ Q F S G VN V I+ D+ G+P+GFA+VEF + Q A+
Sbjct: 7 SVYVGNVPYQVSEEEIGQWFSSVGVVNNVRIVFDRETGRPRGFAFVEFTDEAGAQRAVEQ 66
Query: 169 LNETELHGRQLKVS 182
LN +GR L+V+
Sbjct: 67 LNGASFNGRNLRVN 80
>gi|302497047|ref|XP_003010524.1| hypothetical protein ARB_03225 [Arthroderma benhamiae CBS 112371]
gi|291174067|gb|EFE29884.1| hypothetical protein ARB_03225 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++Q+ F C V V I+ DK G PKGF YVEF +D ++ AL
Sbjct: 8 TAHIGNLSFDATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 66
Query: 170 NETELHGRQLKVS 182
T L GR ++VS
Sbjct: 67 QGTSLQGRNIRVS 79
>gi|326480206|gb|EGE04216.1| translation initiation factor 4B [Trichophyton equinum CBS 127.97]
Length = 551
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++Q+ F C V V I+ DK G PKGF YVEF +D ++ AL
Sbjct: 84 TAHIGNLSFDATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 142
Query: 170 NETELHGRQLKVS 182
T L GR ++VS
Sbjct: 143 QGTSLQGRNIRVS 155
>gi|326472886|gb|EGD96895.1| translation initiation factor 4B [Trichophyton tonsurans CBS
112818]
Length = 540
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++Q+ F C V V I+ DK G PKGF YVEF +D ++ AL
Sbjct: 96 TAHIGNLSFDATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 154
Query: 170 NETELHGRQLKVS 182
T L GR ++VS
Sbjct: 155 QGTSLQGRNIRVS 167
>gi|194334049|ref|YP_002015909.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194311867|gb|ACF46262.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL-L 168
+IY+GN+DY T E++++ F G V+ I+TDKF G+ KGF +VE D A+
Sbjct: 2 NIYIGNLDYGVTEEDLREAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIES 61
Query: 169 LNETELHGRQLKVS 182
LN+T+L+GR +KV+
Sbjct: 62 LNDTDLNGRTIKVN 75
>gi|294882178|ref|XP_002769641.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239873203|gb|EER02359.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 88
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 34/42 (80%)
Query: 149 PKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPG 190
PKGFAY+EF + AVQNALLLN+T GRQLKV KRTN+PG
Sbjct: 3 PKGFAYIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPG 44
>gi|327300000|ref|XP_003234693.1| translation initiation factor 4B [Trichophyton rubrum CBS 118892]
gi|326463587|gb|EGD89040.1| translation initiation factor 4B [Trichophyton rubrum CBS 118892]
Length = 547
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++Q+ F C V V I+ DK G PKGF YVEF +D ++ AL
Sbjct: 84 TAHIGNLSFDATQADIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 142
Query: 170 NETELHGRQLKVS 182
T L GR ++VS
Sbjct: 143 QGTSLQGRNIRVS 155
>gi|427718424|ref|YP_007066418.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427350860|gb|AFY33584.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y T E++++ F GTVNRV + TD+ G+P+GFA+VE +E DA + A +
Sbjct: 2 SIYVGNLSYQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFVE-METDAQETAAIE 60
Query: 169 -LNETELHGRQLKVS 182
L+ E GR LKV+
Sbjct: 61 ALDGAEWMGRDLKVN 75
>gi|348538194|ref|XP_003456577.1| PREDICTED: RNA-binding protein 34-like [Oreochromis niloticus]
Length = 425
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
RS++VGN+ + ++HF+ CGTV V ++ DK G KGF YV F D+VQ AL
Sbjct: 263 RSVFVGNLSFDINELTFRRHFEECGTVEAVRLVRDKNSGLGKGFGYVLFESTDSVQLALK 322
Query: 169 LNETELHGRQLKV 181
L+ ++L GR ++V
Sbjct: 323 LDGSKLEGRSIRV 335
>gi|323335669|gb|EGA76952.1| Nop12p [Saccharomyces cerevisiae Vin13]
Length = 358
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + +HF+ CG + V I+ D K KGFAYV+F ++ +V ALL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 169 LNETELHGRQLK 180
LNE + ++ +
Sbjct: 339 LNEKPMKSQKTR 350
>gi|323303035|gb|EGA56838.1| Nop12p [Saccharomyces cerevisiae FostersB]
Length = 459
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + +HF+ CG + V I+ D K KGFAYV+F ++ +V ALL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 169 LNETELHGRQ 178
LNE + ++
Sbjct: 339 LNEKPMKSQK 348
>gi|449681386|ref|XP_002157256.2| PREDICTED: RNA-binding protein 34-like [Hydra magnipapillata]
Length = 360
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 12/110 (10%)
Query: 101 QAEKEEVDSR-SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFV 158
+A+ ++VD + ++VGN+ ++ + EE++ HF+ CG + + I+ DK G KGF YV F
Sbjct: 194 KADFQKVDQKLCLFVGNLPFSLSDEELRSHFKDCGWIEDIRIIRDKATGLGKGFGYVRFK 253
Query: 159 EIDAVQNALLLNETELHGRQLKV-------SAKRTNIPGMKQFRGRRPNT 201
D V L L+E++ GR+L+V KR + P FRG R +
Sbjct: 254 NSDGVMLGLKLHESDFKGRKLRVFRSRNENQEKRKSKPS---FRGVRTTS 300
>gi|6324532|ref|NP_014601.1| Nop12p [Saccharomyces cerevisiae S288c]
gi|74676462|sp|Q08208.1|NOP12_YEAST RecName: Full=Nucleolar protein 12
gi|1419839|emb|CAA99043.1| unnamed protein product [Saccharomyces cerevisiae]
gi|207341353|gb|EDZ69435.1| YOL041Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273915|gb|EEU08834.1| Nop12p [Saccharomyces cerevisiae JAY291]
gi|259149444|emb|CAY86248.1| Nop12p [Saccharomyces cerevisiae EC1118]
gi|285814848|tpg|DAA10741.1| TPA: Nop12p [Saccharomyces cerevisiae S288c]
gi|323346597|gb|EGA80883.1| Nop12p [Saccharomyces cerevisiae Lalvin QA23]
gi|349581127|dbj|GAA26285.1| K7_Nop12p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763209|gb|EHN04739.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 459
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + +HF+ CG + V I+ D K KGFAYV+F ++ +V ALL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 169 LNETELHGRQ 178
LNE + ++
Sbjct: 339 LNEKPMKSQK 348
>gi|151945592|gb|EDN63833.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
Length = 459
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + +HF+ CG + V I+ D K KGFAYV+F ++ +V ALL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 169 LNETELHGRQ 178
LNE + ++
Sbjct: 339 LNEKPMKSQK 348
>gi|392296290|gb|EIW07392.1| Nop12p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 459
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + +HF+ CG + V I+ D K KGFAYV+F ++ +V ALL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 169 LNETELHGRQ 178
LNE + ++
Sbjct: 339 LNEKPMKSQK 348
>gi|413918640|gb|AFW58572.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 390
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
DH E AD A + D+ M + K++ + + L + +K GA +
Sbjct: 152 DHQVPMEKVADARKSHVKTAQANDVSMMTDKSKDLIQPSSML-----QAQKASGA---AG 203
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
S + Q E DSR+++V NV + + + + +HF G V + I+TD GQ G AY
Sbjct: 204 SNTTGQPEGGP-DSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAY 262
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRT 186
+EF+ ++ + AL LN T R LKV K +
Sbjct: 263 IEFLHKESAEQALTLNGTSFMSRILKVVRKSS 294
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 78 REMQAKVEKE-MGAVQDSSSTSATQAEKEEV-DSR-SIYVGNVDYACTPEEVQQHFQSCG 134
REM K+ + + ++ S T K+ + +SR IYVGN+ ++ P+ +++HF CG
Sbjct: 197 REMFVKLAAHVIASRRNPGGLSHTPPMKDHIFESRYKIYVGNLAWSVQPQHLREHFTKCG 256
Query: 135 TVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
TV +LTD K G+ + + ++ F + ++ AL LN TE HGR + V
Sbjct: 257 TVVSTRLLTDRKGGRSRVYGFLSFSSAEELEAALQLNNTEFHGRDIIV 304
>gi|156839965|ref|XP_001643668.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156114288|gb|EDO15810.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 467
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RSI+VGN+D+ E + HF+SCG + V I+ D K KGFAY++F ++ +V A
Sbjct: 293 NKRSIFVGNMDFEQDEETLWSHFESCGEIEYVRIIRDSKTNLGKGFAYIQFKDLQSVNKA 352
Query: 167 LLLNETEL----HGRQLKVS 182
LLLN+ + R+L+VS
Sbjct: 353 LLLNDKKFDNTKTTRKLRVS 372
>gi|50543140|ref|XP_499736.1| YALI0A03773p [Yarrowia lipolytica]
gi|49645601|emb|CAG83659.1| YALI0A03773p [Yarrowia lipolytica CLIB122]
Length = 330
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT-DKFGQPKGFAYVEFVEIDAVQ 164
+ DSR ++VGN+ + T E +Q HF+SCG + RV +++ + G+ KGF++V+F + DA +
Sbjct: 161 DTDSRVLFVGNLPFNATEEMLQDHFKSCGDIRRVRMMSFEDTGKSKGFSFVDFYDADATR 220
Query: 165 NALLLNETE-LHGRQLKVSA 183
AL + L GR L++ A
Sbjct: 221 KALKGRLYKYLEGRTLRLEA 240
>gi|190407303|gb|EDV10570.1| nucleolar protein 12 [Saccharomyces cerevisiae RM11-1a]
Length = 459
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + +HF+ CG + V I+ D K KGFAYV+F ++ +V ALL
Sbjct: 279 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 338
Query: 169 LNETELHGRQ 178
LNE + ++
Sbjct: 339 LNEKPMKSQK 348
>gi|431931272|ref|YP_007244318.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829575|gb|AGA90688.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 94
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF---VEIDAVQNA 166
+IYVGN+ Y T +E+++ F + G ++ V+++TDKF GQ KGF +VE E DA A
Sbjct: 2 NIYVGNLAYGVTEDELREAFGAFGEISSVSVITDKFTGQSKGFGFVEMPNNSEADAAIKA 61
Query: 167 LLLNETELHGRQLKVSAKR 185
LNET L GR ++V+ R
Sbjct: 62 --LNETPLKGRNIRVNEAR 78
>gi|449278094|gb|EMC86061.1| RNA-binding protein 34, partial [Columba livia]
Length = 184
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RS+++GN+ Y + + V++HF CG V V I+ D K G KGF YV F DAV A
Sbjct: 102 NKRSVFLGNLSYDISNDAVREHFAVCGEVVAVRIVRDRKTGLGKGFGYVLFENTDAVHLA 161
Query: 167 LLLNETELHGRQLKV 181
L LN++ L GR+++V
Sbjct: 162 LKLNDSVLLGRKIRV 176
>gi|363749889|ref|XP_003645162.1| hypothetical protein Ecym_2633 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888795|gb|AET38345.1| Hypothetical protein Ecym_2633 [Eremothecium cymbalariae
DBVPG#7215]
Length = 430
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RS++VGN+D+ E + +HF+SCG + V I+ D K KGFAYV+F++ +V ALL
Sbjct: 263 RSVFVGNLDFEEIEENLWKHFESCGDIEYVRIIRDPKSNVGKGFAYVQFMDAGSVNKALL 322
Query: 169 LNETEL---HGRQLKVS 182
L+E ++ R+L+VS
Sbjct: 323 LHEKKMTIGKCRKLRVS 339
>gi|413918637|gb|AFW58569.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 588
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
DH E AD A + D+ M + K++ + + L + +K GA +
Sbjct: 350 DHQVPMEKVADARKSHVKTAQANDVSMMTDKSKDLIQPSSML-----QAQKASGA---AG 401
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
S + Q E DSR+++V NV + + + + +HF G V + I+TD GQ G AY
Sbjct: 402 SNTTGQPEGGP-DSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAY 460
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAK 184
+EF+ ++ + AL LN T R LKV K
Sbjct: 461 IEFLHKESAEQALTLNGTSFMSRILKVVRK 490
>gi|323352349|gb|EGA84884.1| Nop12p [Saccharomyces cerevisiae VL3]
Length = 346
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + +HF+ CG + V I+ D K KGFAYV+F ++ +V ALL
Sbjct: 267 RSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALL 326
Query: 169 LNETELHGRQLK 180
LNE + + +
Sbjct: 327 LNEKPMKSXKTR 338
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
S+YVGN + T E++ Q F + G VN V I+ D+ G+P+GFA+VEF + A Q A+
Sbjct: 6 SVYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVEFADEAAAQRAVQE 65
Query: 169 LNETELHGRQLKVS 182
LN + +GRQL+V+
Sbjct: 66 LNGADFNGRQLRVN 79
>gi|209882003|ref|XP_002142439.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558045|gb|EEA08090.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 1078
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 51 EDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSR 110
+ P + + ED+ ++ K ++ L + + K + +DS + K D+R
Sbjct: 829 QTPPSKRQASEDISRQPKHLK-----LEDTTSFNRKRLSNNEDSQQRKKSNISK---DNR 880
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLN 170
+Y GN+ Y+CT EEV++ F CG++ RV++L + KG A++ F + ++A+ N
Sbjct: 881 EVYCGNLPYSCTEEEVRELFAECGSMERVSVLEN-----KGCAFITFKTEEGAKSAMEWN 935
Query: 171 ETELHGRQLKVS 182
TE GR L+++
Sbjct: 936 RTEYKGRMLRIN 947
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTI-LTDKFGQPKGFAYVEFVEIDAVQNALLL 169
S+ V N+ ++ ++ F +CG V RV+I G+ +GFA VE + +QN L L
Sbjct: 966 SVIVRNIPFSSDESSIKSFFSNCGNVRRVSIPRYSDTGKMRGFAMVEMENDEQIQNVLKL 1025
Query: 170 NETELHGRQLKV 181
+ T ++GR++ +
Sbjct: 1026 SGTSMNGREVTI 1037
>gi|348575610|ref|XP_003473581.1| PREDICTED: RNA-binding protein 34-like [Cavia porcellus]
Length = 430
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLN 170
++VGN+ Y V++HF CG++ V ++ D+ G KGF YV F DAV AL LN
Sbjct: 288 VFVGNLPYKVEETAVKEHFLDCGSIVAVRLVRDRVTGVGKGFGYVLFENTDAVHLALKLN 347
Query: 171 ETELHGRQLKV 181
+EL GR+L+V
Sbjct: 348 NSELMGRKLRV 358
>gi|413918635|gb|AFW58567.1| RNA recognition motif family protein [Zea mays]
Length = 706
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
DH E AD A + D+ M + K++ + + L + +K GA +
Sbjct: 468 DHQVPMEKVADARKSHVKTAQANDVSMMTDKSKDLIQPSSML-----QAQKASGA---AG 519
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
S + Q E DSR+++V NV + + + + +HF G V + I+TD GQ G AY
Sbjct: 520 SNTTGQPEGGP-DSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAY 578
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTN 187
+EF+ ++ + AL LN T R LKV K +
Sbjct: 579 IEFLHKESAEQALTLNGTSFMSRILKVVRKSST 611
>gi|226494638|ref|NP_001148871.1| RNA recognition motif family protein [Zea mays]
gi|195622800|gb|ACG33230.1| RNA recognition motif family protein [Zea mays]
Length = 706
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
DH E AD A + D+ M + K++ + + L + +K GA +
Sbjct: 468 DHQVPMEKVADARKSHVKTAQANDVSMMTDKSKDLIQPSSML-----QAQKASGA---AG 519
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
S + Q E DSR+++V NV + + + + +HF G V + I+TD GQ G AY
Sbjct: 520 SNTTGQPEGGP-DSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAY 578
Query: 155 VEFVEIDAVQNALLLNETELHGRQLKVSAKRTN 187
+EF+ ++ + AL LN T R LKV K +
Sbjct: 579 IEFLHKESAEQALTLNGTSFMSRILKVVRKSST 611
>gi|145495181|ref|XP_001433584.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400702|emb|CAK66187.1| unnamed protein product [Paramecium tetraurelia]
Length = 156
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQ 164
+++D SI+V N+D T ++++++F+ CGT+ +VT+ +DK ++YV+F E +V+
Sbjct: 35 KDIDLSSIFVRNLDENTTEDDLKEYFKDCGTIVKVTLRSDK-NTGTLYSYVQFQEQGSVE 93
Query: 165 NALLLNETELHGRQLKVSAKRTNI 188
+AL+L+E + G+++ V KRTN+
Sbjct: 94 DALVLSEGIIRGKKILVFQKRTNL 117
>gi|119482153|ref|XP_001261105.1| translation initiation factor 4B [Neosartorya fischeri NRRL 181]
gi|119409259|gb|EAW19208.1| translation initiation factor 4B [Neosartorya fischeri NRRL 181]
Length = 512
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ +VGN+ + T ++ F CG N V I+ DK + PKGF YVEF +D ++ AL L
Sbjct: 87 TAHVGNLSFEATSADINDLFAGCGVTN-VRIVEDKLTRTPKGFGYVEFETVDGLKKALDL 145
Query: 170 NETELHGRQLKVS 182
+ T L GR ++VS
Sbjct: 146 SGTTLQGRAIRVS 158
>gi|146323064|ref|XP_755976.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|129558598|gb|EAL93938.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|159130031|gb|EDP55145.1| translation initiation factor 4B [Aspergillus fumigatus A1163]
Length = 494
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ +VGN+ + T ++ F CG N V I+ DK + PKGF YVEF +D ++ AL L
Sbjct: 72 TAHVGNLSFEATSADINDLFAGCGVTN-VRIVEDKLTRSPKGFGYVEFETVDGLRRALDL 130
Query: 170 NETELHGRQLKVS 182
+ T L GR ++VS
Sbjct: 131 SGTTLQGRAIRVS 143
>gi|302663420|ref|XP_003023352.1| hypothetical protein TRV_02454 [Trichophyton verrucosum HKI 0517]
gi|291187346|gb|EFE42734.1| hypothetical protein TRV_02454 [Trichophyton verrucosum HKI 0517]
Length = 504
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T +Q+ F C V V I+ DK G PKGF YVEF +D ++ AL
Sbjct: 33 TAHIGNLSFDATQAGIQELFAEC-EVTSVRIVEDKLTGSPKGFGYVEFASVDGLKKALTF 91
Query: 170 NETELHGRQLKVS 182
T L GR ++VS
Sbjct: 92 QGTSLQGRNIRVS 104
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Query: 80 MQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 139
M A +E+ AV+D A AEK +RS++VGN+ Y + ++++ F G V
Sbjct: 1 MAAIQVREISAVKDQQMKEA--AEKS---ARSVFVGNIPYEASDDQLKDIFSQAGPVLSF 55
Query: 140 TILTDK-FGQPKGFAYVEFVEIDAVQNALL-LNETELHGRQLKVSA 183
++ D+ G+PKG+ + E+ + + Q+A+ LN TE+HGRQL+V +
Sbjct: 56 RLVYDRETGKPKGYGFCEYKDSETAQSAMRNLNGTEIHGRQLRVDS 101
>gi|428176376|gb|EKX45261.1| hypothetical protein GUITHDRAFT_87179 [Guillardia theta CCMP2712]
Length = 137
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNA-LL 168
R ++VGN+ ++ E+++ HF CG V R + T++ G+ +G VEF D NA ++
Sbjct: 60 RKVFVGNLSWSTNSEQLKNHFDVCGEVVRADVFTERSGRSRGCGIVEFTSPDGAHNAMMM 119
Query: 169 LNETELHGRQLKVSAKR 185
+N +EL GR + V R
Sbjct: 120 MNNSELDGRSIFVREDR 136
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
S+YVGNV Y T E++ +F + G VN V I+ D+ G+P+GFA+VE+ + Q A+
Sbjct: 7 SVYVGNVPYQGTEEDIGNYFSTVGVVNNVRIVYDRETGRPRGFAFVEYTDESGAQRAVQE 66
Query: 169 LNETELHGRQLKVS 182
LN T +GR L+V+
Sbjct: 67 LNGTSFNGRNLRVN 80
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
R++++GN+ + T +EV++HF SCG + V I+ D K G +G YV F D+V AL
Sbjct: 434 RAVFLGNIPFDITEDEVRKHFDSCGKIESVRIVKDRKSGLSRGIGYVNFENQDSVTLALE 493
Query: 169 LNETELHGRQLKV 181
LN T L R+++V
Sbjct: 494 LNGTNLKNREIRV 506
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN Y T +E+ F S GTV V I+ D+ G+P+GFA+VEF E + + A+
Sbjct: 7 SIYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNE 66
Query: 169 LNETELHGRQLKV 181
LN + +GRQL+V
Sbjct: 67 LNGADFNGRQLRV 79
>gi|254416097|ref|ZP_05029852.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196177030|gb|EDX72039.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+DY+ T E++ + F GTV RV + TD+ G+ +GF +VE D +A+
Sbjct: 2 SIYVGNLDYSVTSEDLSEVFAEYGTVKRVHLPTDRETGRLRGFGFVEMGTEDEEASAISE 61
Query: 169 LNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTF 202
LN E GR+LKV+ R K GRR N F
Sbjct: 62 LNGAEWMGRELKVNQARPREDRPKSGGGRRNNRF 95
>gi|294882258|ref|XP_002769662.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239873262|gb|EER02380.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 214
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNAL 167
S+S+++GN+ ++ T E ++Q F CG + RV+I TD + G+ KGFA+++F + D+ + A+
Sbjct: 95 SKSVFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAV 154
Query: 168 LLNETELHGRQLKVS 182
N + GR L+++
Sbjct: 155 GKNGEDCEGRDLRIN 169
>gi|254581390|ref|XP_002496680.1| ZYRO0D05654p [Zygosaccharomyces rouxii]
gi|238939572|emb|CAR27747.1| ZYRO0D05654p [Zygosaccharomyces rouxii]
Length = 441
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RS++VGN+D+ E + +HF SCG + V I+ D K KGFAYV+F + V A
Sbjct: 267 NKRSVFVGNLDFEEDEESLWRHFGSCGEIEYVRIIRDPKTNMGKGFAYVQFKDFPNVSKA 326
Query: 167 LLLNETEL----HGRQLKVSAKR 185
LLLN+ L R+L+V+ R
Sbjct: 327 LLLNDKPLESNGKSRKLRVTRCR 349
>gi|444314259|ref|XP_004177787.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
gi|387510826|emb|CCH58268.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
Length = 473
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RSI+VGN+D+ E + +HF SCG + V I+ D K KGFAYV+F ++ +V A
Sbjct: 297 NKRSIFVGNLDFEEDEENLWKHFLSCGDIEYVRIVRDSKTNLGKGFAYVQFKDLQSVNKA 356
Query: 167 LLLNETEL------HGRQLKVS 182
LLL + + GR+L+V+
Sbjct: 357 LLLADKVMIKKDGKKGRKLRVT 378
>gi|410078654|ref|XP_003956908.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
gi|372463493|emb|CCF57773.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
Length = 443
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+D+ E + HF CG + V I+ D K KGFAYV+F ++ +V ALL
Sbjct: 269 RSIFVGNLDFEEDEESLWNHFSKCGEIEYVRIIRDSKTNLGKGFAYVQFSDLSSVNKALL 328
Query: 169 LNE--------TELHGRQLKVS 182
LN T R L++S
Sbjct: 329 LNNKPMASITATNKKSRNLRIS 350
>gi|222639809|gb|EEE67941.1| hypothetical protein OsJ_25829 [Oryza sativa Japonica Group]
Length = 164
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 78 REMQAKVEKEMGAVQDSSSTSATQAEKEEV--DSRSIYVGNVDYACTPEEVQQHFQSCGT 135
REM K+ ++ + + + + + T K+ + IYVGN+ ++ P+E++++F CGT
Sbjct: 48 REMLVKLSSDVVSKRRNINMTHTPPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQCGT 107
Query: 136 VNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
V +LTD K G+ + + ++ F + ++ AL L+ T HGR + V
Sbjct: 108 VVSTRLLTDRKGGRGRVYGFLSFASAEELEAALKLDNTHFHGRNILV 154
>gi|17508567|ref|NP_493029.1| Protein R06C1.4 [Caenorhabditis elegans]
gi|3878851|emb|CAB03222.1| Protein R06C1.4 [Caenorhabditis elegans]
Length = 84
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
S+YVGNV Y T EE+ +F + G VN V I+ D+ G+P+GFA+VEF E Q A+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 169 LNETELHGRQLKVS 182
LN +GR L+V+
Sbjct: 67 LNGVAFNGRNLRVN 80
>gi|115474525|ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|50725630|dbj|BAD33097.1| putative RNA-binding protein RNP-D precursor [Oryza sativa Japonica
Group]
gi|113622828|dbj|BAF22773.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|125559951|gb|EAZ05399.1| hypothetical protein OsI_27607 [Oryza sativa Indica Group]
gi|215704603|dbj|BAG94231.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 78 REMQAKVEKEMGAVQDSSSTSATQAEKEEV--DSRSIYVGNVDYACTPEEVQQHFQSCGT 135
REM K+ ++ + + + + + T K+ + IYVGN+ ++ P+E++++F CGT
Sbjct: 203 REMLVKLSSDVVSKRRNINMTHTPPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQCGT 262
Query: 136 VNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
V +LTD K G+ + + ++ F + ++ AL L+ T HGR + V
Sbjct: 263 VVSTRLLTDRKGGRGRVYGFLSFASAEELEAALKLDNTHFHGRNILV 309
>gi|159155220|gb|AAI54771.1| Rbm34 protein [Danio rerio]
Length = 410
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+ Y + +Q HFQ CG + V ++ D+ G KGF YV F D+V AL
Sbjct: 251 RSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALK 310
Query: 169 LNETELHGRQLKV 181
LN + L R+++V
Sbjct: 311 LNGSTLQQRKIRV 323
>gi|50539824|ref|NP_001002382.1| RNA-binding protein 34 [Danio rerio]
gi|49900339|gb|AAH75875.1| RNA binding motif protein 34 [Danio rerio]
Length = 411
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+ Y + +Q HFQ CG + V ++ D+ G KGF YV F D+V AL
Sbjct: 252 RSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALK 311
Query: 169 LNETELHGRQLKV 181
LN + L R+++V
Sbjct: 312 LNGSTLQQRKIRV 324
>gi|218200393|gb|EEC82820.1| hypothetical protein OsI_27609 [Oryza sativa Indica Group]
Length = 164
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 78 REMQAKVEKEMGAVQDSSSTSATQAEKEEV--DSRSIYVGNVDYACTPEEVQQHFQSCGT 135
REM K+ ++ + + + + + T K+ + IYVGN+ ++ P+E++++F CGT
Sbjct: 48 REMLVKLSSDVVSKRRNINMTHTPPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQCGT 107
Query: 136 VNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
V +LTD K G+ + + ++ F + ++ AL L+ T HGR + V
Sbjct: 108 VVSTRLLTDRKGGRGRVYGFLSFASAEELEAALKLDNTHFHGRNILV 154
>gi|212530026|ref|XP_002145170.1| translation initiation factor 4B [Talaromyces marneffei ATCC 18224]
gi|210074568|gb|EEA28655.1| translation initiation factor 4B [Talaromyces marneffei ATCC 18224]
Length = 492
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T +V Q F C N V I+ DK + PKGF YVEF ++ ++ AL
Sbjct: 74 TAHIGNLSFDATSSDVSQLFADCEVTN-VRIVEDKLNRSPKGFGYVEFASVEGLKKALTF 132
Query: 170 NETELHGRQLKVS 182
+ T L GR ++VS
Sbjct: 133 SGTTLQGRAIRVS 145
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
++++VG + + T E +Q+ F+SCG + ++TD+ G+ +GF YV+FV+ + AL
Sbjct: 288 KNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE 347
Query: 169 LNETELHGRQLKV 181
+ TEL GR + V
Sbjct: 348 MAGTELDGRTINV 360
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNAL 167
S++++VGN+ + T + V + F G VN V + TD + G+PKGFAYVEF ++D+ + A+
Sbjct: 388 SQTVFVGNLSFESTQDAVWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKAV 447
Query: 168 LLNET----ELHGRQLKV 181
+ E+ GR++++
Sbjct: 448 DQGRSSEGLEIDGRRVRL 465
>gi|434405771|ref|YP_007148656.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
gi|428260026|gb|AFZ25976.1| RRM domain-containing RNA-binding protein [Cylindrospermum stagnale
PCC 7417]
Length = 103
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y T E+++ F+ GTVNRV + TD+ G+P+GFA+VE +E D + A +
Sbjct: 2 SIYVGNLSYQVTEEDLKLAFKEYGTVNRVQLPTDRETGRPRGFAFVE-METDVQEQAAID 60
Query: 169 -LNETELHGRQLKVS 182
L+ E GR LKV+
Sbjct: 61 ALDGAEWMGRDLKVN 75
>gi|288940038|ref|YP_003442278.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
gi|288895410|gb|ADC61246.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
Length = 91
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF---VEIDAVQNA 166
+IYVGN+ Y+ T +E++ F + G ++ V ++TDKF G KGF +VE E DA
Sbjct: 2 NIYVGNLAYSVTQDELRDAFGAYGEISSVNLITDKFTGSSKGFGFVEMPNNSEADAAIKG 61
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFR 205
LNET L GR LKV+ + RG RP + G R
Sbjct: 62 --LNETPLKGRNLKVNQAKP--------RGERPASRGPR 90
>gi|390949102|ref|YP_006412861.1| RRM domain-containing RNA-binding protein [Thiocystis violascens
DSM 198]
gi|390425671|gb|AFL72736.1| RRM domain-containing RNA-binding protein [Thiocystis violascens
DSM 198]
Length = 90
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 14/94 (14%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF---VEIDAVQNA 166
+IYVGN+ Y T EE++ F + G ++ V ++TDKF G KGF +VE E DA
Sbjct: 2 NIYVGNLAYGVTQEELRDAFGAYGEISSVNLITDKFTGDSKGFGFVEMPNNAEADAAIKG 61
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPN 200
LNET L GR LKV+ + RG RP+
Sbjct: 62 --LNETPLKGRNLKVNQAKP--------RGERPS 85
>gi|195489801|ref|XP_002092891.1| GE14442 [Drosophila yakuba]
gi|194178992|gb|EDW92603.1| GE14442 [Drosophila yakuba]
Length = 250
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+YV N+++ T ++++ HF + GTV + I + G GFA+VE ++ + QNA L+
Sbjct: 116 LYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRG---GFAFVEMADLSSFQNAFRLHN 172
Query: 172 TELHGRQLKV 181
TEL GR +KV
Sbjct: 173 TELQGRNIKV 182
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y T E+++Q F GTV+RV + TD+ G+P+GFA+VE +E D + A +
Sbjct: 2 SIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVE-MESDTQEQAAID 60
Query: 169 -LNETELHGRQLKV 181
L+ E GR LKV
Sbjct: 61 ALDGAEWMGRDLKV 74
>gi|17647371|ref|NP_523855.1| Exu-associated protein [Drosophila melanogaster]
gi|7291851|gb|AAF47270.1| Exu-associated protein [Drosophila melanogaster]
gi|157816362|gb|ABV82175.1| FI01540p [Drosophila melanogaster]
Length = 250
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+YV N+++ T ++++ HF + GTV + I + G GFA+VE ++ + QNA L+
Sbjct: 116 LYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKRRG---GFAFVEMADLSSFQNAFQLHN 172
Query: 172 TELHGRQLKV 181
TEL GR +KV
Sbjct: 173 TELQGRNIKV 182
>gi|356538573|ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786132 [Glycine max]
Length = 748
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 78 REMQAKVEKEMGAVQDSSSTSATQAEKEEV-DSRSIYVGNVDYACTPEEV----QQHFQS 132
RE++ + +E GA +SS ++K E S++I+V D + +E+ Q+HF S
Sbjct: 546 RELRLDLARERGAYTPNSSNWNNSSQKSERGQSQTIFVRGFDTSLGEDEIRGSLQEHFGS 605
Query: 133 CGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
CG + RV+I D + G KGFAYV+F + D++ AL L+ETEL G L V
Sbjct: 606 CGDITRVSIPKDYESGAVKGFAYVDFGDADSMGKALELHETELGGYTLTV 655
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQ 164
E S++++VGN+ ++ +V+ F+ G V V TD G+ KGF +VEF +A Q
Sbjct: 474 ESGTSKTLFVGNLPFSVERADVEGFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAEAAQ 533
Query: 165 NALLLNETELHGRQLKVSAKR 185
NAL LN +L R+L++ R
Sbjct: 534 NALGLNGQQLFNRELRLDLAR 554
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALL 168
+R +YVGN+ + T ++++ F++ G V V + D+ G KGF +V+F ++ +NA
Sbjct: 329 ARKLYVGNLHISITEADIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARNAQS 388
Query: 169 LN-ETELHGRQLKVSAKRTNIPGMKQFRG 196
LN + E+ GR +KVSA T+ GM++F G
Sbjct: 389 LNGQLEIGGRTIKVSAV-TDQSGMQEFGG 416
>gi|410917640|ref|XP_003972294.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 399
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
RS++VGN+ + + HF+ CG+V V ++ D+ G KGF Y+ F DAVQ AL
Sbjct: 250 RSVFVGNLSFDINELAFRHHFEDCGSVEAVRLVRDQNSGLGKGFGYILFKSADAVQLALK 309
Query: 169 LNETELHGRQLKV 181
L+ ++L GR+++V
Sbjct: 310 LDGSKLQGRRIRV 322
>gi|427419443|ref|ZP_18909626.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425762156|gb|EKV03009.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 86
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y + E++Q+ F GTV RVT+ D+ G+P+GFA+VE + DA ++A +
Sbjct: 2 SIYVGNIAYTVSQEDIQEVFADYGTVKRVTVPMDRETGRPRGFAFVE-MSADAEEDAAIE 60
Query: 169 -LNETELHGRQLKVSAKR 185
L+ E GR+++V+ R
Sbjct: 61 ALDGAEWLGREIRVNKAR 78
>gi|344338389|ref|ZP_08769321.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
gi|343801671|gb|EGV19613.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
Length = 90
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 14/94 (14%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF---VEIDAVQNA 166
+IYVGN+ Y T +E++ F + G ++ V ++TDKF G+ KGF +VE E DA
Sbjct: 2 NIYVGNLAYGVTQDELKTAFSAYGEISSVNLITDKFTGESKGFGFVEMPNNSEADAAIKG 61
Query: 167 LLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPN 200
LNET L GR LKV+ + RG RP+
Sbjct: 62 --LNETPLKGRNLKVNQAKP--------RGERPS 85
>gi|242761549|ref|XP_002340201.1| translation initiation factor 4B [Talaromyces stipitatus ATCC
10500]
gi|218723397|gb|EED22814.1| translation initiation factor 4B [Talaromyces stipitatus ATCC
10500]
Length = 486
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T +V Q F C N V I+ DK + PKGF YVEF ++ ++ AL
Sbjct: 74 TAHIGNLSFDATSSDVSQLFADCEVTN-VRIVEDKLNRSPKGFGYVEFATVEGLKKALTF 132
Query: 170 NETELHGRQLKVS 182
+ T L GR ++VS
Sbjct: 133 SGTTLQGRAIRVS 145
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 92 QDSSSTSATQAEKEEVDSR---SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFG 147
+D +S+ A+Q +V SR +++VGN+ + TP+ V + FQ GT+ RV++ T + G
Sbjct: 352 RDRASSRASQ--HGDVPSRPSDTLFVGNLSFDATPDSVTEIFQEYGTITRVSLPTKPEDG 409
Query: 148 QPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKV 181
PKGF YV F ++ Q A L EL+GR +++
Sbjct: 410 MPKGFGYVGFSSVEEAQGAFEALQGAELNGRSMRL 444
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S +++VGN+ + E + + F+ G V I+TD+ G+ KGF YVEF ++A AL
Sbjct: 266 SPNLFVGNLSWNVDEEWLGREFEEFGP-KAVRIVTDRATGRSKGFGYVEFETVEAATAAL 324
Query: 168 LLNE-TELHGRQLKV 181
+ T+L R L +
Sbjct: 325 NAKKGTDLDNRPLNL 339
>gi|344342838|ref|ZP_08773708.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
gi|343805390|gb|EGV23286.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
Length = 90
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL-L 168
+IYVGN+ Y T EE+Q F + G ++ V ++TDKF G+ KGF +VE A+
Sbjct: 2 NIYVGNLAYGVTQEELQAVFAAYGEISSVNLITDKFTGESKGFGFVEMPNNSEADTAIKA 61
Query: 169 LNETELHGRQLKVSAKRTNIPGMKQFRGRRPN 200
LN+T L GR +KV+ + RG RP+
Sbjct: 62 LNDTPLKGRNMKVNQAKP--------RGERPS 85
>gi|258566776|ref|XP_002584132.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905578|gb|EEP79979.1| predicted protein [Uncinocarpus reesii 1704]
Length = 547
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 32/133 (24%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++ + F SC N V I+ DK + PKGF YVEF +D ++ AL
Sbjct: 82 TAHIGNMSFDATQADIAELFASCEVTN-VRIVEDKLTRAPKGFGYVEFATLDGLKKALTF 140
Query: 170 NETELHGRQLKVS-----------------AKRTNIPGMKQFRGR-RPN--TFGF----- 204
T L GR ++VS +++ +P + Q RG RP + GF
Sbjct: 141 QGTSLQGRNIRVSVAEPPKDRHESRDLSDWSRKGPLPDLPQRRGSDRPGYASRGFDAMSD 200
Query: 205 -----RGRRPFIP 212
GRRP+ P
Sbjct: 201 AGSERAGRRPYEP 213
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 88 MGAVQDSSSTSATQ-AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK- 145
M ++Q + S T + EE RS++VGN+ Y + E++++ FQ G V ++ D+
Sbjct: 1 MASIQKTPPPSNTSPSASEERAQRSVFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRE 60
Query: 146 FGQPKGFAYVEFVEIDAVQNALL-LNETELHGRQLKV 181
G+PKG+ + E+ +++ Q+A+ LN + +GR L+V
Sbjct: 61 TGKPKGYGFCEYQDVETAQSAMRNLNNYDYNGRPLRV 97
>gi|347837372|emb|CCD51944.1| similar to translation initiation factor eIF4B [Botryotinia
fuckeliana]
Length = 575
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 12/109 (11%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
++++GN+ + T +V + F C +N V I+ DK +PKGF Y EF ++ +++AL L
Sbjct: 81 TVHLGNLSFDATVGDVNEFFVGCECIN-VRIIEDKMEMKPKGFGYAEFGSLEGLKSALTL 139
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFRGRRPNT-----FGFRGRRPFIPG 213
N+T+ GR +++S + + RG RP+ + +G P +PG
Sbjct: 140 NQTQFQGRNIRIS-----VADPPKDRGDRPDVRELGDWSRKGPLPDLPG 183
>gi|403218189|emb|CCK72680.1| hypothetical protein KNAG_0L00570 [Kazachstania naganishii CBS
8797]
Length = 431
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RS+++GN+D+ E + +HF +CG + V I+ D K KGFAYV+F +++ V ALL
Sbjct: 254 RSVFIGNLDFEEDEETLWKHFATCGPIEYVRIVRDSKTNVGKGFAYVQFKQLETVSKALL 313
Query: 169 LNETEL--------HGRQLKVS 182
LN+ + R+L+VS
Sbjct: 314 LNDKPMKSASNEKKKARKLRVS 335
>gi|270010528|gb|EFA06976.1| hypothetical protein TcasGA2_TC009936 [Tribolium castaneum]
Length = 469
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLN 170
++VGN+ + T EE+ +HF G + V I TDK +P+GFAYVE A Q AL L+
Sbjct: 341 VFVGNLPFDATKEEIVEHFSKAGDIRHVRIPTDKHSNKPRGFAYVELENEVAYQKALSLH 400
Query: 171 ETELHGRQLKV 181
T++ GR++ V
Sbjct: 401 HTQIKGRRINV 411
>gi|328766510|gb|EGF76564.1| hypothetical protein BATDEDRAFT_36238 [Batrachochytrium
dendrobatidis JAM81]
Length = 417
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
+SI++GN+ + + E + F CG + V ++ D+ KGF YV+F E +V AL
Sbjct: 280 KSIFIGNLLFDISEEALWSFFSDCGDITNVRVIRDRNTNVGKGFGYVQFAERSSVSLALK 339
Query: 169 LNETELHGRQLKVS 182
LN+T+L GRQ+++S
Sbjct: 340 LNDTDLQGRQVRIS 353
>gi|329669018|gb|AEB96397.1| cleavage stimulation factor subunit 2 [Angiostrongylus cantonensis]
Length = 97
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
S+YVGN+ Y T + + HF G V V I+ D+ G+PKGF + EF + QNA+
Sbjct: 19 SVYVGNIPYQTTEDAIGNHFSQAGRVTNVRIVYDRETGRPKGFGFCEFSDEAGAQNAVNT 78
Query: 169 LNETELHGRQLKVSAKRTN 187
LN T+ +GR L+V+ N
Sbjct: 79 LNGTDFNGRSLRVNWANKN 97
>gi|195483935|ref|XP_002090493.1| GE13151 [Drosophila yakuba]
gi|194176594|gb|EDW90205.1| GE13151 [Drosophila yakuba]
Length = 433
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 169
R+I+VG++ Y+ T E++++ F SCG ++ + L D KG AYV F + DAV AL L
Sbjct: 258 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 317
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFR 195
N+T L R + V + G KQ R
Sbjct: 318 NQTLLDDRPINVERYQVKKLGAKQVR 343
>gi|154309388|ref|XP_001554028.1| hypothetical protein BC1G_07588 [Botryotinia fuckeliana B05.10]
Length = 574
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 12/109 (11%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
++++GN+ + T +V + F C +N V I+ DK +PKGF Y EF ++ +++AL L
Sbjct: 80 TVHLGNLSFDATVGDVNEFFVGCECIN-VRIIEDKMEMKPKGFGYAEFGSLEGLKSALTL 138
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFRGRRPNT-----FGFRGRRPFIPG 213
N+T+ GR +++S + + RG RP+ + +G P +PG
Sbjct: 139 NQTQFQGRNIRIS-----VADPPKDRGDRPDVRELGDWSRKGPLPDLPG 182
>gi|440795967|gb|ELR17076.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 347
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 80 MQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 139
+ + + + S + + + EK++ +R+IYVGNV+ T E++ Q F CG +
Sbjct: 146 LLGAIPHSLALLSGSPANAQSYHEKQDEIARTIYVGNVNSTITSEQLMQFFAICGPITFC 205
Query: 140 TILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNI 188
+ D+ P FA++EF +A Q A++LN T L R +KV+ + I
Sbjct: 206 RLAGDE-SHPSRFAFIEFATKEAAQAAMMLNGTMLLDRAVKVNHSKNPI 253
>gi|167531199|ref|XP_001748165.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773285|gb|EDQ86926.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 100 TQAEKEEVDS-RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEF 157
T+AE + D RSI+VGN+ + + EE+ F SCGTV V I+ D K+ KGFAYV F
Sbjct: 211 TRAETKTFDLHRSIFVGNLPFDASEEELHGAFDSCGTVEGVRIVRDKKYAIGKGFAYVLF 270
Query: 158 VEIDAVQNALLLNETELHGRQLKVSAKR 185
++V A L+ E ++ GR L+VS R
Sbjct: 271 ELAESVGLA-LMKECQVRGRTLRVSRCR 297
>gi|194886723|ref|XP_001976670.1| GG23005 [Drosophila erecta]
gi|190659857|gb|EDV57070.1| GG23005 [Drosophila erecta]
Length = 250
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+YV N+++ T ++++ HF + GTV + I + G GFA+VE ++ + QNA L+
Sbjct: 116 LYVTNLNFETTKDDLELHFTAAGTVKSIRIPKKRRG---GFAFVEMADLSSFQNAFQLHN 172
Query: 172 TELHGRQLKV 181
TEL GR +KV
Sbjct: 173 TELQGRNIKV 182
>gi|341883256|gb|EGT39191.1| hypothetical protein CAEBREN_30504 [Caenorhabditis brenneri]
Length = 169
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 100 TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFV 158
T+ +++E+DSRSI+V N+D T + +++ + CG++ + I D K G K F +VEFV
Sbjct: 42 TEEKQKEIDSRSIFVSNLDPKMTEDLIRRCLECCGSIKSIHIQRDSKTGVSKRFCFVEFV 101
Query: 159 EIDAVQNALLLNETELHGRQLKVSAKRTN 187
D+V AL LN T G +S K+++
Sbjct: 102 MEDSVDIALPLNGTRFKGNLFYISRKKSS 130
>gi|403342322|gb|EJY70479.1| hypothetical protein OXYTRI_08772 [Oxytricha trifallax]
Length = 471
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 49/79 (62%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDA 162
+KE+ S ++++GN+ Y+ + +++ + CG + V I + G+ KGFA+VEF + ++
Sbjct: 279 KKEQTKSSTVFIGNLSYSTNEQNIRKLLKDCGEIKGVRIALGEDGKMKGFAHVEFEDAES 338
Query: 163 VQNALLLNETELHGRQLKV 181
+ A+ N +L GR +KV
Sbjct: 339 AEKAMKFNGADLDGRNIKV 357
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI-LTDKFGQPKGFAYVEF-VEIDAVQNA 166
S I+VGN+ + E ++ F++ GT+ V+I ++ K + KG+A+++F +A +
Sbjct: 185 STEIFVGNIPFTTDAETLKAKFEAIGTIVNVSIPMSGK--RMKGYAFIKFSTRAEAEKAV 242
Query: 167 LLLNETELHGRQLKV 181
LN+ + GRQLKV
Sbjct: 243 KKLNDFDFDGRQLKV 257
>gi|24584762|ref|NP_609822.1| CG12288 [Drosophila melanogaster]
gi|7298360|gb|AAF53587.1| CG12288 [Drosophila melanogaster]
Length = 435
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 169
R+I+VG++ Y+ T E++++ F SCG ++ + L D KG AYV F + DAV AL L
Sbjct: 260 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 319
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFR 195
N+T L R + V + G KQ R
Sbjct: 320 NQTLLDDRPINVERYQVKKLGAKQVR 345
>gi|406880229|gb|EKD28634.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL-L 169
+YVGN+ Y T E+V+Q F+ G V+ V ++TD+ G+PKGFA+VE + A+ L
Sbjct: 3 LYVGNLSYDATEEDVRQIFEGVGPVSSVNMITDRDTGRPKGFAFVEMENKNDGDKAISEL 62
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFRGRR 198
N+ ++ GR +KVS R P Q G R
Sbjct: 63 NDVDVKGRSIKVSVAR---PKTAQSSGPR 88
>gi|406868018|gb|EKD21055.1| RNA binding domain containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 426
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL- 167
S SIYVGN+ + T E++Q+ F+S G + VTI +D G KGF YVEF I+ A+
Sbjct: 230 SNSIYVGNLLFDITQEDIQREFESFGPIKSVTIASDNRGLSKGFGYVEFESIEQATAAIE 289
Query: 168 LLNETELHGRQLKV 181
N+ L GR+L V
Sbjct: 290 GKNQAVLEGRRLVV 303
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+ E +++ IE + A+ E + V M + S S AE S+++++GN+
Sbjct: 277 EFESIEQATAAIEGKNQAVLEGRRLVVNYM----NKSQRSPAGAEPVNEPSKTLFIGNLA 332
Query: 119 YACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEID-AVQNALLLNETELHG 176
+ + ++ + F+ V V + D+ GQP+GFA+ +FV+++ A++ L E++G
Sbjct: 333 FEMSDADLNKLFRDIRNVIDVRVAIDRRTGQPRGFAHADFVDVESAIKGKDALLGKEVYG 392
Query: 177 RQLKV 181
R L++
Sbjct: 393 RTLRI 397
>gi|390363636|ref|XP_781943.2| PREDICTED: uncharacterized protein LOC576551 [Strongylocentrotus
purpuratus]
Length = 394
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
RS++VGN+ + E V+ HF+ GTV V ++ DK G KGF YV F + +VQ AL
Sbjct: 254 RSLFVGNLAFNIDDEAVRNHFEEFGTVEGVRLIRDKATGVGKGFGYVLFEDSSSVQFALK 313
Query: 169 LNETELHGRQLKV 181
++ T+L+GR L+V
Sbjct: 314 MDGTKLNGRPLRV 326
>gi|345566286|gb|EGX49229.1| hypothetical protein AOL_s00078g262 [Arthrobotrys oligospora ATCC
24927]
Length = 574
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 108 DSR-SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQN 165
DSR ++VGN+D+ E + +HF +CG V V ++ D K KGFAYV+F + V+
Sbjct: 388 DSRKCVFVGNLDFEAAEESLWKHFSTCGKVENVRLVRDAKTNVGKGFAYVQFADDVDVEK 447
Query: 166 ALLLNETEL---HGRQLKVSAKRT 186
ALLLNE + GR+ K+ R
Sbjct: 448 ALLLNEKPMEVEKGRKRKLRVTRA 471
>gi|21430048|gb|AAM50702.1| GM13065p [Drosophila melanogaster]
Length = 435
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 169
R+I+VG++ Y+ T E++++ F SCG ++ + L D KG AYV F + DAV AL L
Sbjct: 260 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 319
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFR 195
N+T L R + V + G KQ R
Sbjct: 320 NQTLLDDRPINVERYQVKKLGAKQVR 345
>gi|238489901|ref|XP_002376188.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220698576|gb|EED54916.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 92
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 9/72 (12%)
Query: 63 MKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACT 122
MK+R+ E+E EA LREMQA ++++ + + +KEE+D+RSI+VGNVDY +
Sbjct: 29 MKRRVAEMESEAAKLREMQATLDQQ---------SENLREDKEEIDARSIFVGNVDYGAS 79
Query: 123 PEEVQQHFQSCG 134
PEE+Q+ ++
Sbjct: 80 PEEIQRISRAVA 91
>gi|189500331|ref|YP_001959801.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
gi|189495772|gb|ACE04320.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
Length = 89
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFV-EIDAVQNALL 168
+IY+GN+DY + E++++ F G V+ I++DKF G+ KGF +VE + +A Q
Sbjct: 2 NIYIGNLDYGVSEEDLREAFGEFGEVSSANIISDKFTGRSKGFGFVEMPNDAEANQAIDA 61
Query: 169 LNETELHGRQLKVSAKR 185
LN+T+L+GR +KV+ R
Sbjct: 62 LNDTDLNGRSIKVNQAR 78
>gi|308504932|ref|XP_003114649.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
gi|308258831|gb|EFP02784.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
Length = 150
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
S+YVGNV Y T EE+ +F + G VN V I+ D+ G+P+GFA+VE+ E Q A+
Sbjct: 73 SVYVGNVPYQGTEEEIGNYFSTVGIVNNVRIVYDRETGRPRGFAFVEYSEEAGAQRAVEE 132
Query: 169 LNETELHGRQLKVS 182
LN +GR L+V+
Sbjct: 133 LNGAAFNGRNLRVN 146
>gi|259483295|tpe|CBF78566.1| TPA: translation initiation factor 4B (AFU_orthologue;
AFUA_2G16400) [Aspergillus nidulans FGSC A4]
Length = 497
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++ F CG N V I+ DK + PKGF YVEF +D ++ AL L
Sbjct: 83 TAHIGNLSFDATSGDISDLFADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDL 141
Query: 170 NETELHGRQLKVS 182
+ L GR ++VS
Sbjct: 142 SGATLQGRSIRVS 154
>gi|195579698|ref|XP_002079698.1| GD21886 [Drosophila simulans]
gi|194191707|gb|EDX05283.1| GD21886 [Drosophila simulans]
Length = 436
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 169
R+I+VG++ Y+ T E++++ F SCG ++ + L D KG AYV F + DAV AL L
Sbjct: 261 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 320
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFR 195
N+T L R + V + G KQ R
Sbjct: 321 NQTLLDDRPINVERYQVKKLGAKQVR 346
>gi|195344626|ref|XP_002038882.1| GM17146 [Drosophila sechellia]
gi|194134012|gb|EDW55528.1| GM17146 [Drosophila sechellia]
Length = 436
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 169
R+I+VG++ Y+ T E++++ F SCG ++ + L D KG AYV F + DAV AL L
Sbjct: 261 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 320
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFR 195
N+T L R + V + G KQ R
Sbjct: 321 NQTLLDDRPINVERYQVKKLGAKQVR 346
>gi|67900726|ref|XP_680619.1| hypothetical protein AN7350.2 [Aspergillus nidulans FGSC A4]
gi|40742531|gb|EAA61721.1| hypothetical protein AN7350.2 [Aspergillus nidulans FGSC A4]
Length = 496
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++ F CG N V I+ DK + PKGF YVEF +D ++ AL L
Sbjct: 82 TAHIGNLSFDATSGDISDLFADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDL 140
Query: 170 NETELHGRQLKVS 182
+ L GR ++VS
Sbjct: 141 SGATLQGRSIRVS 153
>gi|430813955|emb|CCJ28747.1| unnamed protein product [Pneumocystis jirovecii]
Length = 364
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQN 165
V RSI++GN+ + E++ +F CG + V I+ D K KGFAYV+F + +++
Sbjct: 218 VPKRSIFIGNLSFDAQEEQLWSYFAHCGEIEFVRIVRDNKTNLGKGFAYVQFKDRESIDQ 277
Query: 166 ALLLNETE-LHGRQLKVSAKRTNIP 189
ALLL++ E L GR+L+V + NIP
Sbjct: 278 ALLLHDKEGLCGRKLRV-IRAKNIP 301
>gi|405973847|gb|EKC38537.1| Serine/threonine-protein kinase PAK 6 [Crassostrea gigas]
Length = 1486
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
RSI+VGN+ E+V+ HF+SCG + V ++ D K G KG YV F D+V A+
Sbjct: 376 RSIFVGNLPLDIKEEDVRSHFESCGKIRNVRVIRDSKSGVGKGICYVTFKSKDSVGLAMK 435
Query: 169 LNETELHGRQLKV 181
L TEL GR+ ++
Sbjct: 436 LKGTELSGRKARI 448
>gi|121716823|ref|XP_001275920.1| translation initiation factor 4B [Aspergillus clavatus NRRL 1]
gi|119404077|gb|EAW14494.1| translation initiation factor 4B [Aspergillus clavatus NRRL 1]
Length = 511
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ +VGN+ + T ++ F C N V I+ DK + PKGF YVEF +D ++ AL L
Sbjct: 78 TAHVGNLSFEATSADISDLFADCSVTN-VRIVEDKLTRSPKGFGYVEFETVDGLKKALDL 136
Query: 170 NETELHGRQLKVS 182
+ T L GR ++VS
Sbjct: 137 SGTTLQGRAIRVS 149
>gi|255713116|ref|XP_002552840.1| KLTH0D02640p [Lachancea thermotolerans]
gi|238934220|emb|CAR22402.1| KLTH0D02640p [Lachancea thermotolerans CBS 6340]
Length = 462
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RS++VGN+D+ E + +HF+ G + V ++ D K KGFAYV+F + + A
Sbjct: 295 NKRSVFVGNLDFEEAEENLWKHFEKSGEIEYVRVVRDSKTNMGKGFAYVQFRDFQDINKA 354
Query: 167 LLLNETELH--GRQLKVS 182
LLLN+ +L+ GR+L+V+
Sbjct: 355 LLLNDQKLNGTGRKLRVT 372
>gi|407923317|gb|EKG16390.1| hypothetical protein MPH_06359 [Macrophomina phaseolina MS6]
Length = 509
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG-QPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++Q F C N V I+ DK +PKGF YVEF +D ++ AL L
Sbjct: 82 TAHLGNLSFDATEGDIQDFFMECEVTN-VRIVEDKLDHKPKGFGYVEFGSVDGLKKALAL 140
Query: 170 NETELHGRQLKVS 182
+ T+ GR ++VS
Sbjct: 141 SGTQFQGRNIRVS 153
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
SIYVGN+ Y T E+++ F GTV RV+I TD+ G+P+GFA+VE E A+
Sbjct: 2 SIYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVEMQEESKEDAAIEA 61
Query: 169 LNETELHGRQLKVSAKR 185
L+ E GR LKV+ R
Sbjct: 62 LDGAEWMGRDLKVNKAR 78
>gi|167386758|ref|XP_001737893.1| RNA-binding protein SGN1 [Entamoeba dispar SAW760]
gi|165899137|gb|EDR25806.1| RNA-binding protein SGN1, putative [Entamoeba dispar SAW760]
Length = 178
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDA 162
E+ E D+RS+ V N+D T E++QQ F + G V VT+ K G K +AY+E ++A
Sbjct: 52 EQRERDNRSVCVTNLDPNATKEQLQQLFSTVGNVLLVTLPLTKSGVSKRYAYIELDSVEA 111
Query: 163 VQNALL-LNETELHGRQLKVSAKRTNI 188
+ A+ LN T+L ++ V+ KRTNI
Sbjct: 112 RERAVTNLNGTKLGENEISVAVKRTNI 138
>gi|17508585|ref|NP_493022.1| Protein R09B3.2 [Caenorhabditis elegans]
gi|3879015|emb|CAB03236.1| Protein R09B3.2 [Caenorhabditis elegans]
Length = 83
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
S+YVGN + T EE+ F S G +N V I+ D+ G+P+GFA++EF E + Q A+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 169 LNETELHGRQLKVS 182
+N E +GR L+V+
Sbjct: 66 MNGAEFNGRPLRVN 79
>gi|88813641|ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88789097|gb|EAR20234.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 96
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
+SIYVGN+ + + +E++ F G VN V ++TD+ G+P+GF +V DA
Sbjct: 3 KSIYVGNLPFTASEDEIRDLFAQYGEVNEVRLITDRDTGRPRGFGFVRMAPADADAAIEA 62
Query: 169 LNETELHGRQLKVS 182
LN TEL GR L+++
Sbjct: 63 LNGTELDGRALRIN 76
>gi|67478542|ref|XP_654661.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56471729|gb|EAL49274.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449709729|gb|EMD48937.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 178
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDA 162
E+ E D+RS+ V N+D T E++QQ F + G V VT+ K G K +AY+E ++A
Sbjct: 52 EQRERDNRSVCVTNLDPNATKEQLQQLFSTVGNVLLVTLPLTKSGVSKRYAYIELDSVEA 111
Query: 163 VQNALL-LNETELHGRQLKVSAKRTNI 188
+ A+ LN T+L ++ V+ KRTNI
Sbjct: 112 RERAVTNLNGTKLGENEISVAVKRTNI 138
>gi|407042435|gb|EKE41325.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 178
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDA 162
E+ E D+RS+ V N+D T E++QQ F + G V VT+ K G K +AY+E ++A
Sbjct: 52 EQRERDNRSVCVTNLDPNATKEQLQQLFSTVGNVLLVTLPLTKSGVSKRYAYIELDSVEA 111
Query: 163 VQNALL-LNETELHGRQLKVSAKRTNI 188
+ A+ LN T+L ++ V+ KRTNI
Sbjct: 112 RERAVTNLNGTKLGENEISVAVKRTNI 138
>gi|361124588|gb|EHK96669.1| putative RNA-binding protein sce3 [Glarea lozoyensis 74030]
Length = 549
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
++++GN+ + T +V F C +N V I+ DK +PKGF Y EF ++ +++AL L
Sbjct: 58 TVHLGNLSFDATVGDVTDFFTGCECIN-VRIIEDKMEMKPKGFGYAEFQTLEGLKSALTL 116
Query: 170 NETELHGRQLKVS 182
N+T+ GR +++S
Sbjct: 117 NQTQFQGRNIRIS 129
>gi|359476016|ref|XP_003631779.1| PREDICTED: uncharacterized protein LOC100854295 [Vitis vinifera]
Length = 664
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 57 SKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGN 116
++ + D+K R ++E E LR +++ G D SS+S ++ +
Sbjct: 436 AQKMLDLKVRFHQLEREMCKLRSKHTDLKR--GGKPDLSSSSGEAILEQPFE-------- 485
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLNETELH 175
V +A T E + HF CG V V ILTD+ QPK A++ F +++V AL L+ T
Sbjct: 486 VHFAATKEALSNHFAKCGLVVNVVILTDETIAQPKRSAFITFASVESVNKALALSGTSFF 545
Query: 176 GRQLK 180
R +K
Sbjct: 546 SRTVK 550
>gi|156058226|ref|XP_001595036.1| hypothetical protein SS1G_03124 [Sclerotinia sclerotiorum 1980]
gi|154700912|gb|EDO00651.1| hypothetical protein SS1G_03124 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 577
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 12/109 (11%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
++++GN+ + T +V + F C +N V I+ DK +PKGF Y EF ++ +++AL L
Sbjct: 80 TVHLGNLSFDATIGDVNEFFVGCECIN-VRIIEDKMEMKPKGFGYAEFGSLEGLKSALTL 138
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFRGRRPNT-----FGFRGRRPFIPG 213
N T+ GR +++S + + RG RP+ + +G P +PG
Sbjct: 139 NGTQFQGRNIRIS-----VADPPKDRGDRPDVRELGDWSRKGPLPDLPG 182
>gi|115387941|ref|XP_001211476.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195560|gb|EAU37260.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 376
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ +VGN+ + T ++ F CG N V I+ DK + PKGF YVEF +D ++ AL L
Sbjct: 80 TAHVGNLSFDATSADISDLFAECGVTN-VRIVEDKLTRSPKGFGYVEFETVDGLKKALDL 138
Query: 170 NETELHGRQLKVS 182
+ L GR ++VS
Sbjct: 139 SGATLQGRAIRVS 151
>gi|390478033|ref|XP_002761311.2| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Callithrix jacchus]
Length = 212
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 58 KDLEDMKKRLKEIEEEAGA---------LREMQAKVEKEMGAVQDSS-STSATQAEKEEV 107
++LE +K ++ +E+ G LRE + V ++ + + + T EK E
Sbjct: 53 QELEAIKMKVWAMEQAEGLPWPPGAQRLLREEEDAVAGQLLSPETTGYPIGGTPEEKVEA 112
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 145
D RSIYVGNVDY + EE + HF CG V RVTILT +
Sbjct: 113 DHRSIYVGNVDYGGSAEEQEAHFSCCGKVYRVTILTTR 150
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S ++VGN+ + T + V + F G V V + TD+ G+PKGF YVEFV++DA + A
Sbjct: 443 SSVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAF 502
Query: 168 -LLNETELHGRQLKV 181
L+ TE+ GR +++
Sbjct: 503 EALSGTEIGGRSIRL 517
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVE 156
SA AE+EE +S++I+VG + + +++ F CG V + D+ G+ +GF +VE
Sbjct: 332 SAAPAEQEE-ESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVE 390
Query: 157 FVEIDAVQNAL-LLNETELHGRQLKVSAKRTNIPGM--KQFRGRRPNTFG 203
F + +VQ A+ +N E+ GR + V PG+ Q R R FG
Sbjct: 391 FADASSVQKAIDTMNGKEIDGRPVNVD----RAPGLNKNQQRENRAKAFG 436
>gi|323510053|dbj|BAJ77920.1| cgd3_4150 [Cryptosporidium parvum]
Length = 747
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 93 DSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGF 152
D +S + DSR +Y GN+ Y+CT EE++ F+ CG++ RV++L+D KG
Sbjct: 526 DDNSQPRKRQNTNNKDSREVYCGNLPYSCTEEEIRGLFEECGSIERVSVLSD-----KGC 580
Query: 153 AYVEFVEIDAVQNALLLNETELHGRQLKVS 182
A++ F + + ++A+ N+TE GR L+++
Sbjct: 581 AFITFEQEEGAKSAIQWNQTEYKGRMLRIN 610
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTI-LTDKFGQPKGFAYVEFVEIDAVQNALLL 169
S+ V N+ ++ E V+ F CG V RV+I G+ +GFA VEF + +QNAL L
Sbjct: 629 SVIVRNIPFSSDDESVKSFFNGCGVVKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALKL 688
Query: 170 NETELHGRQLKV 181
+ T ++GR++ +
Sbjct: 689 SGTSMNGREVTI 700
>gi|195353268|ref|XP_002043127.1| GM11898 [Drosophila sechellia]
gi|194127215|gb|EDW49258.1| GM11898 [Drosophila sechellia]
Length = 250
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+YV N+++ T ++++ HF + G V + I + G GFA+VE ++ + QNA L+
Sbjct: 116 LYVTNLNFETTKDDLELHFSAAGAVKSIRIPKKRRG---GFAFVEMADLSSFQNAFQLHN 172
Query: 172 TELHGRQLKV 181
TEL GR +KV
Sbjct: 173 TELQGRNIKV 182
>gi|321463774|gb|EFX74787.1| hypothetical protein DAPPUDRAFT_306960 [Daphnia pulex]
Length = 432
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL 167
S I+VGN+ + T E + HF CG ++ V I+ D+ G KGF YV F D+V+ AL
Sbjct: 248 SLGIFVGNLTFDVTDEALWLHFGECGKISDVRIIRDRVNGMGKGFGYVNFESADSVELAL 307
Query: 168 LLNETELHGRQLKVSAKRTN 187
L+++ L+ R ++VS + N
Sbjct: 308 KLDQSLLNDRPIRVSRCKKN 327
>gi|403417497|emb|CCM04197.1| predicted protein [Fibroporia radiculosa]
Length = 257
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 21 DADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKD------LEDMKKRLKEIEEEA 74
D DI V+E++ + + H D E + +A +D +KKR K EEEA
Sbjct: 34 DNDIPVEENQDAVEAEVPSGHVEDQARRQELEASAGEEDNRVVESSHSLKKR-KRREEEA 92
Query: 75 GALREMQAKVEKEMGAVQD--------SSSTSATQAEKEEVDSRSI-YVGNVDYACTPEE 125
G E + K +K A + SS AE + R I ++GN+ Y T +
Sbjct: 93 GKGVEDEPKAKKRKAADSNEHEDPSISRSSIPKAVAESNVKEKRFILFIGNLKYTTTQKA 152
Query: 126 VQQHFQSCGTVNRVTILTDKF---GQP----KGFAYVEFVEIDAVQNALLLNETELHGRQ 178
+Q HF +C V ++T K G+P KG A++EF +A+Q AL L+++EL GR
Sbjct: 153 IQIHFAACDPPPTVRLITPKAPSSGKPVTKSKGCAFLEFSSRNALQQALKLHQSELEGRM 212
Query: 179 LKV 181
+ V
Sbjct: 213 INV 215
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+YVG++D+A T +V+ F CG V VT+ D G+ KG+A+V+F + A + A+ LN
Sbjct: 357 VYVGSLDFALTEADVKSLFSPCGEVISVTLNRDN-GKSKGYAFVQFADAGAAKLAMELNG 415
Query: 172 TELHGRQLKV 181
E+ GR LKV
Sbjct: 416 VEVAGRPLKV 425
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEI 160
AE++E ++ V + E++Q F CG + V I +D+ G+ G AYVEF +
Sbjct: 185 AERDERLKNTVIVHQLPTNVRKHEIEQVFSECGEIRDVAIQSDRARGRAGGVAYVEFKDF 244
Query: 161 DAVQNALLLNETELHGRQLKVSAKR 185
AV A+ L+ + + V A +
Sbjct: 245 AAVSKAMGLSSRRIDNIPMLVQATK 269
>gi|303314775|ref|XP_003067396.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107064|gb|EER25251.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 549
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++ + F++C V V I+ DK + PKGF YVEF +D ++ AL
Sbjct: 82 TAHIGNLSFDATQADISELFEAC-EVTSVRIVEDKLTRAPKGFGYVEFATLDGLKKALTY 140
Query: 170 NETELHGRQLKVS 182
T L GR ++VS
Sbjct: 141 QGTSLQGRNIRVS 153
>gi|395334547|gb|EJF66923.1| hypothetical protein DICSQDRAFT_95813 [Dichomitus squalens LYAD-421
SS1]
Length = 346
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG-------QPKGFAYVEFVEIDAVQ 164
++VGN+ Y T E V+QHF C V ++T K + KGFA+VEF +A+Q
Sbjct: 150 LFVGNLKYTTTKEAVEQHFSKCDPPPTVRLMTPKPSATSKPSVKSKGFAFVEFKHRNALQ 209
Query: 165 NALLLNETELHGRQLKV 181
L L+++EL GR++ V
Sbjct: 210 QGLKLHQSELEGRKINV 226
>gi|118398866|ref|XP_001031760.1| RNA binding protein [Tetrahymena thermophila]
gi|89286093|gb|EAR84097.1| RNA binding protein [Tetrahymena thermophila SB210]
Length = 451
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNAL 167
+R+I+VGN+ + + E+++ HF+SCG + V ++ D K + KGF YV F E QNAL
Sbjct: 182 TRTIFVGNLHFKISEEQLRHHFESCGDILNVRVIRDPKTHEGKGFGYVFFKEKTGFQNAL 241
Query: 168 LLNETELHGRQLKV 181
N T+L R+++V
Sbjct: 242 EKNGTKLLEREIRV 255
>gi|384494771|gb|EIE85262.1| hypothetical protein RO3G_09972 [Rhizopus delemar RA 99-880]
Length = 218
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLN 170
+++GN+ + T EE+Q+HF + + + +LTDK G+PKGFA++EF + AL +
Sbjct: 97 VFIGNLPFTTTKEELQKHFSTVENIKSLRLLTDKATGKPKGFAFMEFTNSKDLNKALSFH 156
Query: 171 ETELHGRQLKV 181
T RQ+ V
Sbjct: 157 HTFFKRRQINV 167
>gi|145528476|ref|XP_001450032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417632|emb|CAK82635.1| unnamed protein product [Paramecium tetraurelia]
Length = 156
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQ 164
+++D SI+V N+D T ++++++F+ CG + +VT+ +DK ++Y++F + +V+
Sbjct: 35 KDIDLTSIFVRNLDENTTEDDLKEYFKDCGNIVKVTLRSDK-NTGTLYSYIQFQDQSSVE 93
Query: 165 NALLLNETELHGRQLKVSAKRTNI 188
+AL+L+E + G+++ V KRTN+
Sbjct: 94 DALVLSEGIIRGKKILVFQKRTNL 117
>gi|358374899|dbj|GAA91487.1| translation initiation factor 4B [Aspergillus kawachii IFO 4308]
Length = 496
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ +VGN+ + T ++ F CG N V I+ DK + PKGF YVEF +D ++ AL L
Sbjct: 80 TAHVGNLSFDATAADISDLFADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDL 138
Query: 170 NETELHGRQLKVS 182
+ L GR ++ S
Sbjct: 139 SGATLQGRSIRTS 151
>gi|345870843|ref|ZP_08822793.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921312|gb|EGV32033.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF---VEIDAVQNAL 167
IYVGN+ Y+ T E+++ F + G ++ +++TDKF G KGF +VE E DA
Sbjct: 3 IYVGNLAYSVTEEDLRAAFSTYGEISSASLITDKFTGNSKGFGFVEMSNNAEADAAIKG- 61
Query: 168 LLNETELHGRQLKVSAKRTNIP 189
LNET L GR +KV+ + P
Sbjct: 62 -LNETPLKGRNMKVNEAKPRSP 82
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y T E+++ F G V++V + TD+ G+P+GF +VE +A +NA +
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSN-EAEENAAID 60
Query: 169 -LNETELHGRQLKVSAKR 185
LN E GRQLKV+ R
Sbjct: 61 ALNGKEFKGRQLKVNKAR 78
>gi|291286869|ref|YP_003503685.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884029|gb|ADD67729.1| RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 89
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
+IYVGN+ Y+ +++ F G V+ V I+TD+ G+ KGF +VE D + A+
Sbjct: 2 NIYVGNLSYSTNEDDISALFSKIGEVDSVRIITDRDTGRSKGFGFVEMANSDQAKAAIDK 61
Query: 169 LNETELHGRQLKVS 182
LNETEL GR L V+
Sbjct: 62 LNETELDGRNLTVN 75
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALL 168
+R +YVGN+ T + ++Q F + GTV V + D+ G KGF +++F ++ +NAL
Sbjct: 280 ARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFTRLEDARNALS 339
Query: 169 LN-ETELHGRQLKVSAKRTNIPGMK 192
LN + E+ GR +KVS T+ PG++
Sbjct: 340 LNGQLEIAGRTIKVSTV-TDQPGLQ 363
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQ 164
E D R+++ + T +V + F G V V ++ D+ + KG YVEFV+ +V
Sbjct: 174 ERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVP 233
Query: 165 NALLLN 170
A+ L+
Sbjct: 234 MAIALS 239
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL- 167
+ ++YV N+D + +++Q+HF SCG + ++ G KGF +V F + Q AL
Sbjct: 308 ASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALT 367
Query: 168 LLNETELHGRQLKVSAK-----RTNIPGMKQFRGRRPNTFGFR 205
LN T LHGR L ++ R IP MKQ + N +G++
Sbjct: 368 TLNGTLLHGRSLYIAMAQRKEDRQRIP-MKQAQQGNTNNWGYQ 409
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 31/158 (19%)
Query: 52 DPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQA--------- 102
DP+ NS L+D+ + I A ++K G VQ S SAT A
Sbjct: 125 DPSINSASLQDIFCKFGNILSCKVAEENGKSKC---FGFVQFDSDDSATAALNALNDTML 181
Query: 103 ------------------EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 144
EE ++YV N+ T + ++ F G V V I+ D
Sbjct: 182 DGKKLFVSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKD 241
Query: 145 KFGQPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKV 181
G+ +GF +V F D + A+ LN L ++L V
Sbjct: 242 GNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFV 279
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 80 MQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 139
M E E VQ +++ +A +R +YVGN+ + T ++++Q F+ G V V
Sbjct: 297 MVKPSEAEKNLVQSTTTVNAGSGPYSG-GARRLYVGNLHFNITEDQLRQVFEPFGIVELV 355
Query: 140 TILTDKFGQPKGFAYVEFVEIDAVQNALLLN-ETELHGRQLKVS 182
+ D+ G KGF +V+F ++ +NAL LN + E+ GR +KVS
Sbjct: 356 QLPLDETGHCKGFGFVQFARLEDAKNALNLNGQVEIAGRPIKVS 399
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
SIY+GN+ Y T E++++ F G VNRV + TD+ G+P+GFA+VE D A+
Sbjct: 2 SIYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIEA 61
Query: 169 LNETELHGRQLKVS 182
L+ E GR LKV+
Sbjct: 62 LDGAEWMGRDLKVN 75
>gi|320037732|gb|EFW19669.1| translation initiation factor 4B [Coccidioides posadasii str.
Silveira]
Length = 522
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T ++ + F++C V V I+ DK + PKGF YVEF +D ++ AL
Sbjct: 55 TAHIGNLSFDATQADISELFEAC-EVTSVRIVEDKLTRAPKGFGYVEFATLDGLKKALTY 113
Query: 170 NETELHGRQLKVS 182
T L GR ++VS
Sbjct: 114 QGTSLQGRNIRVS 126
>gi|268563939|ref|XP_002647049.1| C. briggsae CBR-CPF-2 protein [Caenorhabditis briggsae]
Length = 335
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVE 159
Q + E RS++VGN+ Y T E ++Q F G V + ++ D+ G+PKG+ ++EF +
Sbjct: 3 QGQASERSQRSVFVGNISYDVTEETIRQIFTKAGHVLSIKMVHDRETGKPKGYGFIEFPD 62
Query: 160 IDAVQNAL-LLNETELHGRQLKV 181
I A+ +LN EL GR L+V
Sbjct: 63 IATADTAIRVLNGYELGGRVLRV 85
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y T E+++ F G V++V + TDK G+P+GF +V+ + +A +NA +
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVD-MSSEAEENAAID 60
Query: 169 -LNETELHGRQLKVSAKR 185
LN E GRQLKV+ R
Sbjct: 61 ALNGAEWMGRQLKVNKAR 78
>gi|71417144|ref|XP_810487.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70875023|gb|EAN88636.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 276
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 93 DSSSTSATQAEKEEVDSRS-----IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 147
D SSTS E + D R ++VGN+ + + V+ HF+ G V ++ D+ G
Sbjct: 4 DQSSTSGGPQEGRDADHRQNHGNVLFVGNLPFQTPWQHVKDHFRKAGKVRYTDLIADRMG 63
Query: 148 QPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKV 181
+PKG A V V + Q A+ + NET+ GR+L V
Sbjct: 64 RPKGSALVTMVTAEGAQRAIRMYNETDFEGRRLIV 98
>gi|71413449|ref|XP_808862.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70873155|gb|EAN87011.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 276
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 93 DSSSTSATQAEKEEVDSRS-----IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 147
D SSTS E + D R ++VGN+ + + V+ HF+ G V ++ D+ G
Sbjct: 4 DQSSTSGGPQEGRDADHRQNHGNVLFVGNLPFQTPWQHVKDHFRKAGKVRYTDLIADRMG 63
Query: 148 QPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKV 181
+PKG A V V + Q A+ + NET+ GR+L V
Sbjct: 64 RPKGSALVTMVTAEGAQRAIRMYNETDFEGRRLIV 98
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAV 163
EE ++SI+VG + + + + Q F CG V + D+ G+ +GF YVEF +AV
Sbjct: 292 EEEGTKSIFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEAV 351
Query: 164 QNALLLNETELHGRQLKV 181
+ ALLLN E+ GR + +
Sbjct: 352 EAALLLNGKEIDGRPVNI 369
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S ++VGN+ + CT ++V + F G V V + TD+ G+PKGF YVEF +I+ + A
Sbjct: 396 SAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAKKAF 455
Query: 168 -LLNETELHGRQLKV 181
L+ TE+ GR +++
Sbjct: 456 EGLSGTEVAGRPIRL 470
>gi|392591591|gb|EIW80918.1| hypothetical protein CONPUDRAFT_103939 [Coniophora puteana
RWD-64-598 SS2]
Length = 1056
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 103 EKEEVDS----RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFV 158
+KE D+ + +YV + T E+++ F++ GTVN V ++TDK GQ KGFA+VEF
Sbjct: 796 KKERTDADANEKEVYVAGLSKYTTKEDLKGVFKTYGTVNDVRLVTDKNGQSKGFAFVEFE 855
Query: 159 EIDAVQNALLLNETELHGRQLKVS 182
+ Q AL N EL R++ V+
Sbjct: 856 SETSAQAALSANNYELRSRRIAVT 879
>gi|407860794|gb|EKG07505.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 276
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 93 DSSSTSATQAEKEEVDSRS-----IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 147
D SSTS E + D R ++VGN+ + + V+ HF+ G V ++ D+ G
Sbjct: 4 DQSSTSGGPQEGRDADHRQNHGNVLFVGNLPFQTPWQHVKDHFRKAGKVRYTDLIADRMG 63
Query: 148 QPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKV 181
+PKG A V V + Q A+ + NET+ GR+L V
Sbjct: 64 RPKGSALVTMVTAEGAQRAIRMYNETDFEGRRLIV 98
>gi|296412075|ref|XP_002835753.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629543|emb|CAZ79910.1| unnamed protein product [Tuber melanosporum]
Length = 453
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
R +++GN+D+ E + +HF +CG V V ++ D K KGFAYV+F + +V ALL
Sbjct: 275 RCVFIGNLDFEAQEENLWRHFGTCGKVESVRVVRDAKTNVGKGFAYVQFEDPMSVDEALL 334
Query: 169 LNETEL-HGRQLKVSAKRT 186
L+ ++ + R+L+VS +T
Sbjct: 335 LDSKKMANDRKLRVSRAKT 353
>gi|221505851|gb|EEE31496.1| RRM domain-containing protein [Toxoplasma gondii VEG]
Length = 753
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTV--NRVTILTDKFGQPKGFAYVEF-VEIDAV 163
VD+ +I+V N+ ++ + EE+ HF S +V ++ + D G+ +GFA+V+F E DA+
Sbjct: 525 VDATTIFVKNLAFSVSEEELANHFVSLFSVIPSQTVVCRDASGKSRGFAFVKFDTEADAM 584
Query: 164 QNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPF 216
A+L N++ L GR L VS NI KQ R G + PGV F
Sbjct: 585 -AAMLANDSPLSGRPLTVSRSTRNITTPKQQHTRPQRLVGAKPAERQRPGVGF 636
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 77 LREMQ-AKVEKEMGAVQDSSSTSATQ--AEKEEVDSR-SIYVGNVDYACTPEEVQQHFQS 132
LR Q A+ + MGA Q S AT+ A +V+ + ++++ N+D + T +++ HFQS
Sbjct: 264 LRAAQEAEQDATMGATQQSVDDEATRIAACMGKVEEKQTVWISNLDDSVTEQDLLLHFQS 323
Query: 133 CGTVNRVTILTDKFGQPKGFAYVEF 157
C V ++ D + KGFAY +F
Sbjct: 324 CPGFKGVRLVLDFRRRSKGFAYADF 348
>gi|292491403|ref|YP_003526842.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291579998|gb|ADE14455.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 91
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
SIYVGN+ + C+ +E+++ F+ G VN V +++D+ G+P+GF +VE ++ DA A+
Sbjct: 3 SIYVGNLPFQCSQDEIRELFEPFGAVNSVKLISDRETGKPRGFGFVE-MDHDAAAEAIEQ 61
Query: 169 LNETELHGRQLKVSAKR 185
LN T+ GR L+++ R
Sbjct: 62 LNGTDFKGRPLRINEAR 78
>gi|195112762|ref|XP_002000941.1| GI10515 [Drosophila mojavensis]
gi|193917535|gb|EDW16402.1| GI10515 [Drosophila mojavensis]
Length = 433
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEI 160
QA E R++++GN+ Y+ + E++++ F SCG ++ + L D KG AYV F +
Sbjct: 254 QASSEADVKRTVFIGNLKYSASEEKLREIFSSCGEIDYIRCLQDGEKGCKGVAYVCFQKP 313
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFR 195
DAV AL LNET L R + V G KQ R
Sbjct: 314 DAVGLALELNETLLDDRPIHVERYSVKKLGAKQAR 348
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVE 156
SA A + S++++VG + + + + F SCG + T+ D+ G+ +GF YV
Sbjct: 315 SAAPAGGDAQQSKAVFVGQLSWNVDNDWLASEFASCGEIESATVQMDRNTGKSRGFGYVH 374
Query: 157 FVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFG 203
F ++A Q AL LN E+ R +KV P R +R TFG
Sbjct: 375 FTTVEAAQKALELNGKEIDNRPIKVDISTPRNPDAA--RQKRAQTFG 419
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S +++VGN+ + + + V F G V V + TD+ G+PKGF YVEF +++ + A
Sbjct: 426 SNTLFVGNLSFNTSEDSVWSLFNDYG-VKSVRLPTDRESGRPKGFGYVEFEDVEGAKKAF 484
Query: 168 LLNE-TELHGRQLKV 181
N +L GR +++
Sbjct: 485 EANNGADLDGRPIRL 499
>gi|195586537|ref|XP_002083030.1| GD11896 [Drosophila simulans]
gi|194195039|gb|EDX08615.1| GD11896 [Drosophila simulans]
Length = 250
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+YV N+++ T ++++ HF + G V + I + G GFA+VE ++ + QNA L+
Sbjct: 116 LYVTNLNFETTKDDLELHFSAAGAVKSIRIPKKRRG---GFAFVEMADLSSFQNAFQLHN 172
Query: 172 TELHGRQLKV 181
TEL GR +KV
Sbjct: 173 TELQGRNIKV 182
>gi|350636524|gb|EHA24884.1| hypothetical protein ASPNIDRAFT_123074 [Aspergillus niger ATCC
1015]
Length = 437
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ +VGN+ + T ++ F CG N V I+ DK + PKGF YVEF +D ++ AL L
Sbjct: 20 TAHVGNLSFDATAADISDLFADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDL 78
Query: 170 NETELHGRQLKVS 182
+ L GR ++ S
Sbjct: 79 SGATLQGRAIRTS 91
>gi|292490317|ref|YP_003525756.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291578912|gb|ADE13369.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 97
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG-QPKGFAYVEFVEIDAVQNALL- 168
+IYVGN+ Y T EE++ F++ G V+ ++ DKF + KGF +VE + + A+
Sbjct: 2 NIYVGNLSYQVTDEELRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMARQEDAETAIKE 61
Query: 169 LNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRR 208
+N+++L GRQ+ V+ R G RR FG R RR
Sbjct: 62 MNDSDLKGRQIVVNQARPRNEGF-----RRSEGFGDRQRR 96
>gi|213402043|ref|XP_002171794.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
gi|211999841|gb|EEB05501.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
Length = 437
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQ 164
+V+ R ++VGN+ + E + +F+ CG V V I+ D K KGFAYV+F ++V
Sbjct: 280 QVNKRCVFVGNLAFEAEEEPLWCYFEPCGPVEYVRIIRDPKTNLGKGFAYVQFQSAESVD 339
Query: 165 NALLLNETEL-HGRQLKVS 182
ALLLN ++ GR L+VS
Sbjct: 340 KALLLNGKKMPEGRTLRVS 358
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 93 DSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKG 151
D S+ + +K + ++++GN+ + C+ E +Q+ FQ G + RV++ TD+ G KG
Sbjct: 281 DQSARANKYGDKRSAPANTLFLGNLSFDCSNEGIQEIFQEYGNITRVSLPTDRDTGSLKG 340
Query: 152 FAYVEFVEIDAVQNAL-LLNETELHGRQLKV 181
F YV+F ++ AL LN E+ GR +++
Sbjct: 341 FGYVDFGTVEEATAALEALNGQEVEGRAIRI 371
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 78 REMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVN 137
+E +K K A + + + T+A E ++++VG++ + + +++ F+ G +
Sbjct: 167 QEAPSKKRKAEAAAEPAVKKTKTEAPASE-GIKNLFVGSLSWNIDEDWLRREFEGFGEIT 225
Query: 138 RVTILTDK-FGQPKGFAYVEFVEIDAVQNALL-LNETELHGRQLKV 181
++TD+ G+ KGF YVEF A ++E EL GR L V
Sbjct: 226 GCRVITDRESGRSKGFGYVEFASAADAAKAKAEMHEYELDGRGLNV 271
>gi|308505322|ref|XP_003114844.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
gi|308259026|gb|EFP02979.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
Length = 85
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
S+YVGN + + EE+ F + G V V I+ D+ G+P+GFA+VEF + Q A+
Sbjct: 7 SVYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQKAVQE 66
Query: 169 LNETELHGRQLKVS 182
LN E +GRQL+V+
Sbjct: 67 LNGAEFNGRQLRVN 80
>gi|452821941|gb|EME28965.1| hypothetical protein Gasu_35400 [Galdieria sulphuraria]
Length = 279
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 88 MGAVQDSSSTSA-----TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 142
+ AV D S +S + EE R +YVGN+ Y +E++ H + G V V +
Sbjct: 70 LSAVHDVSESSPQGTDDNKVSIEERQKRRVYVGNIPYTVRWQEIKDHMREAGPVQYVHLF 129
Query: 143 TDKFGQPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKVSAKRTNI 188
DK + KG A VE++ +A Q A+ LLN + + GR L V R +I
Sbjct: 130 LDKLKRSKGSALVEYMTEEAAQKAVELLNNSVIAGRSLVVREDRGSI 176
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALL 168
S +++VGN+ + T + +++HF CG + V + G+ KGFA+VEF ++ Q AL
Sbjct: 343 STTLFVGNISFQTTQDSLERHFSKCGPIKAVRVAMGDDGRVKGFAHVEFESPESAQKALE 402
Query: 169 LNETELHGRQLKV 181
+N GR+L++
Sbjct: 403 MNGAPCDGRELRL 415
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQ 164
E+ D + ++VGN+ + T + + Q F GTV V L + G+PKGFA+VEF Q
Sbjct: 235 EDDDKKELFVGNLSFHTTEDSLGQAFGEYGTVTNVK-LPQQDGRPKGFAFVEFATHKEAQ 293
Query: 165 NAL-LLNETELHGRQLKVS 182
AL N + GR L+++
Sbjct: 294 AALDAYNGQDFEGRALRIN 312
>gi|317035924|ref|XP_001397207.2| translation initiation factor 4B [Aspergillus niger CBS 513.88]
Length = 478
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ +VGN+ + T ++ F CG N V I+ DK + PKGF YVEF +D ++ AL L
Sbjct: 79 TAHVGNLSFDATAADISDLFADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDL 137
Query: 170 NETELHGRQLKVS 182
+ L GR ++ S
Sbjct: 138 SGATLQGRAIRTS 150
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S +++VGN+ ++ T + V + F + G V V + TD+ GQPKGF YVEF +++ AL
Sbjct: 371 SATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASKAL 430
Query: 168 L-LNETELHGRQLKV--SAKRT 186
L T+ GR +++ SA RT
Sbjct: 431 NELGGTDFEGRNIRLDFSAPRT 452
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAV 163
EEV +SI+VG + + E ++ F G V + D+ G+ KGF YVEF + +
Sbjct: 269 EEV--KSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASA 326
Query: 164 QNAL-LLNETELHGRQLKV 181
+ A+ +N E+ GR + +
Sbjct: 327 KKAVETMNGREIDGRPVNL 345
>gi|195380213|ref|XP_002048865.1| GJ21274 [Drosophila virilis]
gi|194143662|gb|EDW60058.1| GJ21274 [Drosophila virilis]
Length = 260
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQN 165
+V+ +YV N+++ T ++++ HF GTV + I + G GFA+VE V++ Q
Sbjct: 123 KVNRHVLYVTNLNFETTKDDLESHFAVAGTVKSIRIPKKRRG---GFAFVEMVDLAGFQQ 179
Query: 166 ALLLNETELHGRQLKV 181
A L+ TEL GR++KV
Sbjct: 180 AFQLHNTELQGRKIKV 195
>gi|121719870|ref|XP_001276633.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119404845|gb|EAW15207.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 306
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 92 QDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKG 151
Q S + EK +IY+GN+ Y T E++++H + G V R ++ D G +G
Sbjct: 105 QSSRARRLRLLEKSPTPKETIYIGNLFYDVTSEDLRKHMEKYGAVERTNVILDSRGMSRG 164
Query: 152 FAYVEFVEIDAVQNALLLNETE-LHGRQLKVSAKRTNIPGMKQF 194
FAYV+F ++A + A+ + L GR++ +TN+ G +
Sbjct: 165 FAYVQFESVEAARRAIDGTHLQTLEGRRVTSQYAQTNMDGHRSL 208
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR++Y+GN+ + T ++ F+ V V + D+ GQP+GFA+ EF++ ++ Q L
Sbjct: 212 SRTLYIGNLSFEMTDRDLNDLFKDVSNVIDVRVSIDRRTGQPRGFAHAEFIDAESAQKGL 271
Query: 168 -LLNETELHGRQLKVSAKRTN 187
+L+ +GRQL++ TN
Sbjct: 272 EILSRKSPYGRQLRLDYSHTN 292
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEI 160
+K+ S ++++GN+ + T ++V+ F SCG + V + TD G+PKGF YV F I
Sbjct: 302 GDKQSPPSDTVFIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSI 361
Query: 161 DAVQNALLLNETELHGR--QLKVSAKRT 186
DA + + +N + GR +L S RT
Sbjct: 362 DAAKQCVEMNGHFIAGRPCRLDFSTPRT 389
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGT-VNRVTILTDKFGQPKGFAYVEFVEI 160
A+ E +S +++VG + + E + + F+ GT VN I+ + G+ KGF YV+F
Sbjct: 198 AKSESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGFGYVDFDSP 257
Query: 161 DAVQNALLLN-ETELHGRQLKV 181
+A + A+ +N + E+ GR + +
Sbjct: 258 EAAKAAVAVNGQKEIDGRMVNL 279
>gi|19115130|ref|NP_594218.1| RNA-binding protein Nop12 (predicted) [Schizosaccharomyces pombe
972h-]
gi|17367899|sp|O13741.1|NOP12_SCHPO RecName: Full=Nucleolar protein 12
gi|2462671|emb|CAB11047.1| RNA-binding protein Nop12 (predicted) [Schizosaccharomyces pombe]
Length = 438
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
R ++VGN+ + E + ++F CG+++ V I+ D K KGFAY++F + V ALL
Sbjct: 270 RCVFVGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFKDTMGVDKALL 329
Query: 169 LNETEL-HGRQLKVSAKRTNIP 189
LNE ++ GR L++ ++ P
Sbjct: 330 LNEKKMPEGRTLRIMRAKSTKP 351
>gi|134082739|emb|CAK42631.1| unnamed protein product [Aspergillus niger]
Length = 489
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ +VGN+ + T ++ F CG N V I+ DK + PKGF YVEF +D ++ AL L
Sbjct: 80 TAHVGNLSFDATAADISDLFADCGVTN-VRIVEDKLTKAPKGFGYVEFETVDGLKKALDL 138
Query: 170 NETELHGRQLKVS 182
+ L GR ++ S
Sbjct: 139 SGATLQGRAIRTS 151
>gi|290985874|ref|XP_002675650.1| predicted protein [Naegleria gruberi]
gi|284089247|gb|EFC42906.1| predicted protein [Naegleria gruberi]
Length = 422
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 76 ALREMQAK--VEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQS- 132
ALR + ++ ++ GAV + + S T A ++++ R++YVGN D + T +++++ F +
Sbjct: 155 ALRILGSRTPIQPTPGAVGNGAVYSFTPAHHDQIN-RTVYVGNADISLTEDDLKEFFDAN 213
Query: 133 CGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPG 190
CG V +V + D + FA+VEF+ +++ AL + T L R ++++ RT I G
Sbjct: 214 CGPVTKVVLAGDAVHSAR-FAFVEFLHMESRNKALECSGTLLGNRNIRINPSRTPILG 270
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEI 160
+AE+++ R+IYV ++D +V + F CG + + D P FA+ EF +
Sbjct: 79 KAEEDDKIKRTIYVTSIDTQILEAQVCEFFSYCGRIVNYRVCGDT-QHPTRFAFFEFEQK 137
Query: 161 DAVQNALLLNETELHGRQLKVSAKRTNI 188
++ Q A+ L+ L L++ RT I
Sbjct: 138 ESAQAAVSLSGQFLGRYALRILGSRTPI 165
>gi|302828556|ref|XP_002945845.1| hypothetical protein VOLCADRAFT_54847 [Volvox carteri f.
nagariensis]
gi|300268660|gb|EFJ52840.1| hypothetical protein VOLCADRAFT_54847 [Volvox carteri f.
nagariensis]
Length = 220
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQN 165
DS ++VGN+ + T ++V++HF+ CG + V + D + G+ +GFA+VEF + +
Sbjct: 58 TDSTRVFVGNLSWKATEDDVRKHFKDCGKIVNVRMGVDPETGRSRGFAHVEFGDAAQAKK 117
Query: 166 ALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGR 207
A+ TE+ GR +KV + RP +FG GR
Sbjct: 118 AVSKAGTEIDGRAIKVEVTQP-----------RPQSFGGGGR 148
>gi|300175323|emb|CBK20634.2| unnamed protein product [Blastocystis hominis]
Length = 385
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNA 166
V R+++V N+ +A + E+VQ+ FQ G + VTI+ + G+ +GF YVEF +A ++A
Sbjct: 250 VQHRTVFVNNLSFAASEEDVQERFQQYGEIVEVTIVRNNHGKSRGFGYVEFSTEEAAESA 309
Query: 167 LLLNETELHGRQLKV 181
L+ N L R+++V
Sbjct: 310 LVENGKMLKSRKMEV 324
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
+SI+VG + + + + + F CG V T+ D+ G+ +GF YV F +AV+ A+
Sbjct: 333 KSIFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAIE 392
Query: 169 LNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFG 203
LN E+ GR + V ++N P R +R TFG
Sbjct: 393 LNGKEIDGRAVNVD--KSNPPNKDASREKRAKTFG 425
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNA- 166
S +++VGN+ + + + + F G V V + TD+ G+PKGF YVEF +++ + A
Sbjct: 432 SATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAH 491
Query: 167 LLLNETELHGRQLKV 181
+ EL GR +++
Sbjct: 492 AAMQGVELDGRSVRL 506
>gi|221484169|gb|EEE22465.1| poly(A) binding protein [Toxoplasma gondii GT1]
Length = 624
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTV--NRVTILTDKFGQPKGFAYVEF-VEIDAV 163
VD+ +I+V N+ ++ + EE+ HF S +V ++ + D G+ +GFA+V+F E DA+
Sbjct: 396 VDATTIFVKNLAFSVSEEELANHFVSLFSVIPSQTVVCRDASGKSRGFAFVKFDTEADAM 455
Query: 164 QNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPF 216
A+L N++ L GR L VS NI KQ R G + PGV F
Sbjct: 456 A-AMLANDSPLSGRPLTVSRSTRNITTPKQQHTRPQRLVGAKPAERQRPGVGF 507
Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 88 MGAVQDS-----SSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 142
MGA Q S + +A + EE +++++ N+D + T +++ HFQSC V ++
Sbjct: 147 MGATQQSVDDEATRIAACMGKVEE--KQTVWISNLDDSVTEQDLLLHFQSCPGFKGVRLV 204
Query: 143 TDKFGQPKGFAYVEF 157
D + KGFAY +F
Sbjct: 205 LDFRRRSKGFAYADF 219
>gi|237838527|ref|XP_002368561.1| poly(A) binding protein, putative [Toxoplasma gondii ME49]
gi|211966225|gb|EEB01421.1| poly(A) binding protein, putative [Toxoplasma gondii ME49]
Length = 624
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTV--NRVTILTDKFGQPKGFAYVEF-VEIDAV 163
VD+ +I+V N+ ++ + EE+ HF S +V ++ + D G+ +GFA+V+F E DA+
Sbjct: 396 VDATTIFVKNLAFSVSEEELANHFVSLFSVIPSQTVVCRDASGKSRGFAFVKFDTEADAM 455
Query: 164 QNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVPF 216
A+L N++ L GR L VS NI KQ R G + PGV F
Sbjct: 456 A-AMLANDSPLSGRPLTVSRSTRNITTPKQQHTRPQRLVGAKPAERQRPGVGF 507
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 88 MGAVQDSSSTSATQ--AEKEEVDSR-SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 144
MGA Q S AT+ A +V+ + ++++ N+D + T +++ HFQSC V ++ D
Sbjct: 147 MGATQQSVDDEATRIAACMGKVEEKQTVWISNLDDSVTEQDLLLHFQSCPGFKGVRLVLD 206
Query: 145 KFGQPKGFAYVEF 157
+ KGFAY +F
Sbjct: 207 FRRRSKGFAYADF 219
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALL 168
+R +YVGN+ + T ++++ F++ G V V + D+ G KGF +V+F ++ +NA
Sbjct: 326 ARKLYVGNLHVSITEADIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARNAQS 385
Query: 169 LN-ETELHGRQLKVSAKRTNIPGMKQFRG 196
LN + E+ GR +KVSA T+ GM++ G
Sbjct: 386 LNGQLEIGGRTIKVSAV-TDQSGMQEVGG 413
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y+ E+++ F GTV R+T+ TD+ G+P+GFA+VE +E DA + +
Sbjct: 2 SIYVGNLSYSAKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVE-MEEDATEEKAIE 60
Query: 169 -LNETELHGRQLKVSAKRTNIP 189
L+ E GR+L+V+ + P
Sbjct: 61 ALDGAEWMGRELRVNKAKPREP 82
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 82 AKVEKEMGAVQDSSSTSATQ-AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 140
A + G +D S A ++ +S ++++GN+ + +Q+ F S GT++ +
Sbjct: 341 ANARQNAGGAKDRSQARAKSFGDQTSPESDTLFIGNISFGADENAIQETFSSYGTISGIR 400
Query: 141 ILTD-KFGQPKGFAYVEFVEIDAVQNALL-LNETELHGRQLKV 181
+ TD + G+PKGF Y++F +D ++AL L +EL GR +++
Sbjct: 401 LPTDPESGRPKGFGYIQFSSVDEARSALNELQGSELAGRAMRL 443
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI-DAVQNA 166
S +++VGN+ + E ++ F+S G ++ V I+TD+ G+ +GF YVEF DA +
Sbjct: 264 SANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDAAKAF 323
Query: 167 LLLNETELHGRQLKV--SAKRTNIPGMKQFRGRRPNTFG 203
EL GR L + + R N G K R +FG
Sbjct: 324 EAKKGAELDGRPLNLDYANARQNAGGAKDRSQARAKSFG 362
>gi|30682379|ref|NP_180012.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110737785|dbj|BAF00831.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|190016014|gb|ACE62895.1| At2g24350 [Arabidopsis thaliana]
gi|330252471|gb|AEC07565.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 537
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE--VDSRSIYVGN 116
+++++K++++E+E LR +Q+K K+ + S + +++ +E +SR I+V N
Sbjct: 396 EIKNVKEKMQELE-----LRIIQSKQLKKQKVEERKPSPQSGESQYQEDVSESRVIHVTN 450
Query: 117 VDYACTPEEVQQHFQS-CGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLLNETEL 174
V YA E + F S CG V V ++TD + PKG A+V F ++V A+ L+ T
Sbjct: 451 VYYAAKKEAISMFFSSKCGAVQNVIVVTDPVTRHPKGTAFVTFATKESVGKAVALSGTMF 510
Query: 175 HGRQLKV 181
+ R +KV
Sbjct: 511 YSRPIKV 517
>gi|302926856|ref|XP_003054377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735318|gb|EEU48664.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 294
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y T E++ + F S G V R ++ D G+PKGF + ++ + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 168 L-LNETELHGRQLKV 181
LN+ E+ GR+L+V
Sbjct: 67 RNLNDYEIMGRKLRV 81
>gi|302695587|ref|XP_003037472.1| hypothetical protein SCHCODRAFT_47147 [Schizophyllum commune H4-8]
gi|300111169|gb|EFJ02570.1| hypothetical protein SCHCODRAFT_47147 [Schizophyllum commune H4-8]
Length = 331
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP-------KGFAYVEFVEIDAVQ 164
++VGN+ ++ + E +Q+HF +C + +LT K +P KG A++EF A+Q
Sbjct: 155 LFVGNLKFSTSKEAIQRHFSACEPPPEIRLLTPKTTKPGAAPTKSKGCAFLEFQNKTALQ 214
Query: 165 NALLLNETELHGRQLKV 181
AL L+++EL GR + V
Sbjct: 215 QALKLHQSELEGRLINV 231
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEF-VEIDAVQNALL 168
SIYVGN+ Y T E++++ F+ GTVNRV + TD+ G+P+GFA+VE E +
Sbjct: 2 SIYVGNLSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVEMGTEAEETTAIEA 61
Query: 169 LNETELHGRQLKVS 182
L+ + GR LKV+
Sbjct: 62 LDGAQWMGRDLKVN 75
>gi|381157372|ref|ZP_09866606.1| RRM domain-containing RNA-binding protein [Thiorhodovibrio sp. 970]
gi|380881235|gb|EIC23325.1| RRM domain-containing RNA-binding protein [Thiorhodovibrio sp. 970]
Length = 94
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF---VEIDAVQNA 166
+IYVGN+ Y T +E++ F + G V ++TDKF GQ KGF +VE E DA A
Sbjct: 2 NIYVGNLAYGVTQDELRDAFAAYGDVESANLITDKFTGQSKGFGFVEMPNNSEADAAIKA 61
Query: 167 LLLNETELHGRQLKVS 182
LNET L GR ++V+
Sbjct: 62 --LNETPLKGRPIRVN 75
>gi|407408043|gb|EKF31617.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 276
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 93 DSSSTSATQAEKEEVDSRS-----IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 147
D SSTS E + D R ++VGN+ + + V+ HF+ G V ++ D+ G
Sbjct: 4 DQSSTSGGPQEGRDGDHRQNHGNVLFVGNLPFQTPWQHVKDHFRKAGKVRYTDLIADRMG 63
Query: 148 QPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKV 181
+PKG A V V + Q A+ + NET+ GR+L V
Sbjct: 64 RPKGSALVTMVTAEGAQRAIRMYNETDFEGRRLIV 98
>gi|413938964|gb|AFW73515.1| hypothetical protein ZEAMMB73_612183 [Zea mays]
Length = 80
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 19/94 (20%)
Query: 5 DEQEHDVYGGEIPDEMDADIDVDEHEHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMK 64
DE+EH+VYG EIP+ D D+D D D D A ++L++MK
Sbjct: 2 DEEEHEVYGQEIPE--DGDMDG----------------ADVDMAASGDDAAKLQELDEMK 43
Query: 65 KRLKEIEEEAGALREMQAKVEKEM-GAVQDSSST 97
+RLKE+EEEA ALR+MQAKV KEM G + S T
Sbjct: 44 RRLKEMEEEAAALRDMQAKVAKEMQGCLPMCSPT 77
>gi|308466761|ref|XP_003095632.1| hypothetical protein CRE_13667 [Caenorhabditis remanei]
gi|308244631|gb|EFO88583.1| hypothetical protein CRE_13667 [Caenorhabditis remanei]
Length = 160
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI-----------LTDKFGQPKGFAYVE 156
+ ++VGNVD+ T E++ HF+ CG + R+TI + + A++E
Sbjct: 19 TATCVFVGNVDFGATVAELEAHFKGCGEIVRITIPKDKITKKQKKYVKEVKEILFHAFIE 78
Query: 157 FVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGM 191
F +V NA+++N + RQ+ V+ KRTN PGM
Sbjct: 79 FECAASVANAIVMNGSTFRERQIVVTLKRTNKPGM 113
>gi|268530138|ref|XP_002630195.1| Hypothetical protein CBG00602 [Caenorhabditis briggsae]
Length = 191
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 65 KRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPE 124
K KE EEE +Q+ Q S T E++E+DSR+++VGN+D T
Sbjct: 28 KWSKEEEEELCIWMRIQS---------QQKSYLPLTDQEQKELDSRTVFVGNIDVNTTAR 78
Query: 125 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAK 184
E+++HF CG+V ++ G K +VE V+ A LN T L+ R + V K
Sbjct: 79 EIERHFDVCGSVKVRFVIDRSTGFQKNHCFVEIENALFVEFAFDLNGTTLNHRYITVRPK 138
Query: 185 RT 186
++
Sbjct: 139 KS 140
>gi|432104867|gb|ELK31379.1| Embryonic polyadenylate-binding protein 2 [Myotis davidii]
Length = 161
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 117 VDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLLNETELH 175
VDY E++ +F CG V +VTIL +KF G PKG+AY+EF + Q A+ L+++
Sbjct: 33 VDYGVIAGELEAYFNICGEVQQVTILCNKFSGHPKGYAYIEFATESSAQAAVGLDKSIFQ 92
Query: 176 GRQLKV 181
GR +KV
Sbjct: 93 GRVIKV 98
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLN 170
++VG + +A + + Q F CG + T+ D+ G+ +GF YV F DAV+ AL +N
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIESATVQMDRNTGKSRGFGYVHFTTPDAVEKALQMN 60
Query: 171 ETELHGRQLKVSAKRTNIPGMK-QFRGRRPNTFG 203
E+ GR +KV ++P K Q R +R FG
Sbjct: 61 GQEIDGRAIKVD---RSLPRDKSQVREKRAQAFG 91
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 100 TQAEKEEVD--SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVE 156
QA +EV S +++VGN+ + T + V F G V V + TD+ G+PKGF YVE
Sbjct: 87 AQAFGDEVSAPSSTLFVGNLSFGVTEDTVWSFFNDYG-VKSVRLPTDRETGRPKGFGYVE 145
Query: 157 FVEIDAVQNAL-LLNETELHGRQLKV 181
F +ID + A N +E+ GR +++
Sbjct: 146 FEDIDGAKKAFEAANGSEIEGRSIRL 171
>gi|119175208|ref|XP_001239872.1| hypothetical protein CIMG_09493 [Coccidioides immitis RS]
gi|392870065|gb|EAS28622.2| translation initiation factor 4B [Coccidioides immitis RS]
Length = 549
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + + ++ + F++C V V I+ DK + PKGF YVEF +D ++ AL
Sbjct: 82 TAHIGNLSFDASQADISELFEAC-EVTSVRIVEDKLTRAPKGFGYVEFATLDGLKKALTY 140
Query: 170 NETELHGRQLKVS 182
T L GR ++VS
Sbjct: 141 QGTSLQGRNIRVS 153
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL 167
D R +++G + + T +++++ F+SCG + + + + +P GF ++ F + D+V A+
Sbjct: 23 DKRRVFLGGLPFKATEKDIKKMFESCGAIENIELPMNADSRPAGFGFLTFKDADSVAKAV 82
Query: 168 LLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIP 212
++ EL GR +KV K+ G T G G++PF P
Sbjct: 83 AMDGQELMGRWVKV----------KEADG----TEGSAGKKPFTP 113
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLL 169
+I++GN+ + + ++ F CG V V TD+ G KGF +V+F E A A+
Sbjct: 126 TIFMGNLSWDVDEDTIRSFFADCGEVVNVRFATDRETGDFKGFGHVQFAESSATDLAVAK 185
Query: 170 NETELHGRQLKV 181
+ GR ++V
Sbjct: 186 GGEFVAGRAIRV 197
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 89 GAVQDSSSTSATQAEKEEVD----SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 144
GA D +T + EK E D R+ +V N+DY+ + + Q F CG + + ++
Sbjct: 747 GAGGDGPTTHSDFVEKAEQDPDKSRRTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRLVKT 806
Query: 145 KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGF 204
G+ KG+AYVEF + V AL L+ T + GR + VS QF+ +
Sbjct: 807 IKGKSKGYAYVEFKDELGVLEALKLDRTPIEGRPMFVSKCEDRSQKKAQFKF----STAM 862
Query: 205 RGRRPFIPGVPFV 217
+ FI +PF
Sbjct: 863 EKNKLFIKNLPFT 875
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Query: 88 MGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 147
+ +D S A ++ +++ N+ + C+ + + Q F G V V ++T + G
Sbjct: 843 VSKCEDRSQKKAQFKFSTAMEKNKLFIKNLPFTCSKDALIQIFSEHGPVKEVRMVTYRSG 902
Query: 148 QPKGFAYVEFV-EIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRG 206
PKG AYVEF E DA + + + ++ +++V+ +N P +R R
Sbjct: 903 APKGLAYVEFEDEQDAAKAVMKTDGLKIGDHEIEVAI--SNPP-------QRGTPVNVRE 953
Query: 207 RRPFIPGV 214
FIP +
Sbjct: 954 ETSFIPAL 961
>gi|308504790|ref|XP_003114578.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
gi|308258760|gb|EFP02713.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
Length = 84
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
S+YVGN Y T +E+ +F + G V V I+ D+ G+P+GFA+VEF + Q A
Sbjct: 7 SVYVGNATYQTTEQELGDYFSTVGQVTNVRIVCDRETGRPRGFAFVEFADEAGAQRACDQ 66
Query: 169 LNETELHGRQLKVS 182
LN + +GRQL+V+
Sbjct: 67 LNGVDFNGRQLRVN 80
>gi|194880593|ref|XP_001974476.1| GG21761 [Drosophila erecta]
gi|190657663|gb|EDV54876.1| GG21761 [Drosophila erecta]
Length = 455
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 169
R+I+VG++ Y+ E++++ F SCG ++ + L D KG AYV F + DAV AL L
Sbjct: 280 RTIFVGSLKYSANEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 339
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFR 195
N+T L R + V + G KQ R
Sbjct: 340 NQTLLDDRPINVERYQVKKLGAKQVR 365
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALL 168
+R +YVGN+ + +++++ F+S G+V V + D+ G KGF +V+F ++ +NAL
Sbjct: 284 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 343
Query: 169 LN-ETELHGRQLKVSA--KRTNIP 189
LN + E+ GR +KVSA +T +P
Sbjct: 344 LNGQLEIAGRAIKVSAVTDQTEVP 367
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALL 168
+R +YVGN+ + +++++ F+S G+V V + D+ G KGF +V+F ++ +NAL
Sbjct: 284 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 343
Query: 169 LN-ETELHGRQLKVSA--KRTNIP 189
LN + E+ GR +KVSA +T +P
Sbjct: 344 LNGQLEIAGRAIKVSAVTDQTEVP 367
>gi|940288|gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALL 168
S++++VGN+ ++ +++ FQ CG V V + +D+ G+ KGF +VEF +A Q+AL
Sbjct: 354 SKTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSALE 413
Query: 169 LNETELHGRQLKVSAKR 185
LN EL R +++ R
Sbjct: 414 LNGQELLQRGVRLDLAR 430
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 109 SRSIYVGNVDYACTPEEVQ----QHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
S++++V D + +E++ QHF SCG +RV+I D G KGFAY++F + D+
Sbjct: 450 SQTVFVRGFDKSLGEDEIRAKLEQHFASCGQASRVSIPKDYDTGYSKGFAYMDFKDSDSF 509
Query: 164 QNALLLNETELHGRQLKV 181
A+ L+ +EL G L +
Sbjct: 510 NKAIELHGSELDGYPLSI 527
>gi|307211749|gb|EFN87744.1| RNA-binding protein 34 [Harpegnathos saltator]
Length = 555
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
+SI++GN+ + ++ ++F CG + V ++ DK GQ +GF YV F DAV AL
Sbjct: 371 KSIFIGNLKFGMNTNDIWENFSKCGEIESVRLIRDKKTGQTRGFGYVNFKSEDAVTLALK 430
Query: 169 LNETELHGRQLKVSAKR 185
L+ E++ R ++V R
Sbjct: 431 LDGVEINNRPVRVRTCR 447
>gi|367017858|ref|XP_003683427.1| hypothetical protein TDEL_0H03570 [Torulaspora delbrueckii]
gi|359751091|emb|CCE94216.1| hypothetical protein TDEL_0H03570 [Torulaspora delbrueckii]
Length = 419
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNA 166
+ RSI+VGN+D+ E + HF+ CG + V ++ D K KGFAY++F + +V A
Sbjct: 246 NKRSIFVGNLDFEEDDESLWLHFKDCGEIEYVRLVRDAKTNMGKGFAYIQFKDFQSVNKA 305
Query: 167 LLLNETELHG-------RQLKVS 182
LLLN+ + R+L+VS
Sbjct: 306 LLLNDKPMQSVKPNGPKRKLRVS 328
>gi|167517070|ref|XP_001742876.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779500|gb|EDQ93114.1| predicted protein [Monosiga brevicollis MX1]
Length = 1825
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 89 GAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 148
GA +S+ + QA K E + R+++V N+D++ T +E++ F CG + V + + G+
Sbjct: 629 GAGDESAPVAPRQAHKVEAEDRTVFVKNLDFSVTEDELRARFADCGEIVDVRMPFNHKGK 688
Query: 149 PKGFAYVEFVEIDAVQNALLLNETELHGRQLKVS--AKRTNIPGM 191
KG+AY+EF AV AL + + R + V R+ +P +
Sbjct: 689 AKGYAYLEFASASAVNPALSKDRQIMGTRPMLVDRYVDRSQMPSL 733
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFV-EIDAVQNALL 168
+S++V N+DY + E++ F G V V ++T G + F YV+FV E DA +
Sbjct: 744 KSLFVKNLDYKASEAEIKDLFNKHGAVEAVRLVTKFDGSRRDFCYVDFVTEADAAKAQAA 803
Query: 169 LNETELHGRQLKVSAKRTNIP 189
L+ LHGR L+V+ + P
Sbjct: 804 LDGHMLHGRALRVNISKPPGP 824
>gi|209527224|ref|ZP_03275736.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376003288|ref|ZP_09781101.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|209492382|gb|EDZ92725.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375328318|emb|CCE16854.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
Length = 93
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
SIYVGN+ Y TP+++ + F GTV R I TD+ G+ +GF +VE V D A+
Sbjct: 2 SIYVGNLSYDVTPDDLSEVFAQYGTVKRSMIPTDRETGRSRGFGFVEMVNEDEETKAIEA 61
Query: 169 LNETELHGRQLKVSAKR 185
L+ E GR LKV+ R
Sbjct: 62 LDGAEWMGRSLKVNKAR 78
>gi|322704001|gb|EFY95601.1| RNA recognition motif containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 555
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ Y T E V + F+ C V+ V I+ D+ +PKGF YVEF +I+ ++ AL L
Sbjct: 84 TAHLGNLAYDATNESVTEFFEGCEVVS-VRIIEDREMQRPKGFGYVEFADIEGLKKALTL 142
Query: 170 NETELHGRQLKV 181
+ +GR +K+
Sbjct: 143 DGESFNGRMIKI 154
>gi|195054168|ref|XP_001993998.1| GH17992 [Drosophila grimshawi]
gi|193895868|gb|EDV94734.1| GH17992 [Drosophila grimshawi]
Length = 444
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL 167
+ R+I+VGN+ Y+ E++++ F SCG ++ + L D KG AYV F + DAV AL
Sbjct: 272 NKRTIFVGNLKYSANEEKLREIFSSCGEIDYIRCLHDGERGCKGVAYVCFQQPDAVGLAL 331
Query: 168 LLNETELHGRQLKVSAKRTNIPGMKQFR 195
LNET L R + V G KQ R
Sbjct: 332 ELNETMLDERPIHVERYAVKKLGAKQAR 359
>gi|356544468|ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779929 [Glycine max]
Length = 744
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 78 REMQAKVEKEMGAVQDSSSTSATQAEKE-EVDSRSIYVGNVDYACTPEEV----QQHFQS 132
RE++ + +E GA +SS ++K S++++V D + +E+ Q+HF S
Sbjct: 541 RELRLDLARERGAYTPNSSNWNNSSQKSGRGQSQTVFVRGFDTSLGEDEIRGSLQEHFGS 600
Query: 133 CGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKR 185
CG + RV+I D + G KGFAYV+F ++D++ AL L+ETEL G L V +
Sbjct: 601 CGDITRVSIPKDYESGAVKGFAYVDFSDVDSMGKALELHETELGGYTLTVDEAK 654
Score = 45.4 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDA 162
++E S++++VGN+ ++ +V+ F+ G V V TD G+ KGF +VEF A
Sbjct: 467 KEETGASKTLFVGNLPFSVERADVEDFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAAA 526
Query: 163 VQNALLLNETELHGRQLKVSAKR 185
Q AL LN +L R+L++ R
Sbjct: 527 AQKALGLNGQQLFNRELRLDLAR 549
>gi|429962103|gb|ELA41647.1| hypothetical protein VICG_01280 [Vittaforma corneae ATCC 50505]
Length = 344
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI-LTDKFGQPKGFAYVE 156
S ++ E +E R++++ ++ Y ++++Q Q G V RVTI +T + KGFAYVE
Sbjct: 82 SGSEEECDEETQRTVFIKDIGYDLREDDLRQQMQRLGEVIRVTIPMTHDLRRNKGFAYVE 141
Query: 157 FVEIDAVQNALLLNETELHGRQLKV 181
F + Q AL L+ TEL GR++ V
Sbjct: 142 FKRLADAQKALKLDGTELLGRKVAV 166
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG--QPKGFAYVEFVEIDAVQNAL- 167
+++V N+ Y T E++++F+ G + +++ D + KGF ++E+ E D + AL
Sbjct: 179 TLFVKNLSYTTTKSELKEYFERFGKIYNISLPVDNENTERNKGFCFIEYTEPDPITRALK 238
Query: 168 ---LLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNT 201
LNE L+ + + R + GR NT
Sbjct: 239 GKHTLNERTLYVIEGNKNEDRNKKRSTDRLYGRSKNT 275
>gi|406608094|emb|CCH40528.1| Nucleolar protein 12 [Wickerhamomyces ciferrii]
Length = 458
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
+ R+I+VGN+D+ EE+ F CG + V I+ D KGF YV+F + +V A
Sbjct: 275 NKRTIFVGNLDFEEKEEELWNIFSECGEIESVRIVRDSTTNMGKGFGYVQFKDFTSVSKA 334
Query: 167 LLLNETEL--HGRQLKVS 182
LL+NE +L R+L++S
Sbjct: 335 LLMNEKKLGEKKRKLRIS 352
>gi|425780634|gb|EKV18640.1| Translation initiation factor 4B [Penicillium digitatum PHI26]
Length = 497
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ +VGN+ + T ++ + F CG N V ++ DK + PKGF YVEF ++ +Q AL L
Sbjct: 84 TCHVGNLSFESTDADISEFFAGCGVTN-VRLVEDKLTKAPKGFGYVEFETVEGLQKALDL 142
Query: 170 NETELHGRQLKVS 182
+ + GR ++ S
Sbjct: 143 SGSSFQGRSIRTS 155
>gi|313234527|emb|CBY10484.1| unnamed protein product [Oikopleura dioica]
Length = 333
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
+RS++VGN+ Y T E+++ F G V ++ D+ G+PKG+ + E+ + D +A+
Sbjct: 24 ARSVFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKDTDTAMSAM 83
Query: 168 L-LNETELHGRQLKV 181
LN ELHGR L+V
Sbjct: 84 RNLNTRELHGRNLRV 98
>gi|443722303|gb|ELU11225.1| hypothetical protein CAPTEDRAFT_227550 [Capitella teleta]
Length = 565
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNA 166
D RS+++GN+ +EV+ HFQ CG V V ++ D+ G KGF +V F ++ AV A
Sbjct: 408 DKRSVFLGNLPLEVQEDEVRLHFQECGEVENVRLVRDRGTGIGKGFGFVLFKDVCAVDLA 467
Query: 167 LLLNETELHGRQLKV 181
L ++E GR+L+V
Sbjct: 468 LKMHEEVFRGRKLRV 482
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 21/106 (19%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTV----------------NRVTILTDKFGQP 149
E D R++++GN+ +++ + F+ CG++ R ++T F +
Sbjct: 302 EADKRTVFIGNISLKAEKKDILKLFKGCGSIASIRFRSVTPSNPKLPKRAALITKDFHES 361
Query: 150 KGF--AYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQ 193
AY+ F E ++ AL LN + L+V + PG+K+
Sbjct: 362 MASFNAYIVFKEQESATKALKLNGEKFLNFHLRVDSLH---PGVKK 404
>gi|153874940|ref|ZP_02002958.1| RNA-binding protein [Beggiatoa sp. PS]
gi|152068596|gb|EDN67042.1| RNA-binding protein [Beggiatoa sp. PS]
Length = 89
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL- 168
+IYVGN+ Y+ T EE+++ F G ++ V ++TDK+ GQ KGFA+VE V+ + A+
Sbjct: 2 NIYVGNLSYSMTEEELKEIFTEYGEISTVNLITDKYTGQSKGFAFVEMVKQADAETAIKE 61
Query: 169 LNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRP 209
LN + G +KV+ R RG +P RRP
Sbjct: 62 LNGKTIKGMSIKVNQARP--------RGEKP-------RRP 87
>gi|212545797|ref|XP_002153052.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
gi|210064572|gb|EEA18667.1| nucleic acid-binding protein [Talaromyces marneffei ATCC 18224]
Length = 308
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
+RS+Y+GN+ Y T E+ + F+S V V + D+ G P+GFA+ +F++ + Q AL
Sbjct: 200 TRSLYIGNLAYDLTDRELNELFKSVRNVIEVRVAVDRQTGNPRGFAHADFLDTPSAQAAL 259
Query: 168 -LLNETELHGRQLKV 181
+L+ HGR+LKV
Sbjct: 260 EILSSKAPHGRRLKV 274
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL- 167
S +IY+GN+ + T E+++ +S G V + I++D G KGF YV F ++A Q A+
Sbjct: 109 SPTIYIGNLFFDITAEDLKSKMESFGVVEKAAIISDARGLSKGFGYVTFDSVEAAQRAIE 168
Query: 168 LLNETELHGRQLKV 181
+N+ GR++ V
Sbjct: 169 EMNQQVYEGRRVLV 182
>gi|357473911|ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein [Medicago truncatula]
Length = 623
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQ 164
E S++++VGN+ ++ ++++ FQ CG V V +D+ G+ KGF +VEF +A Q
Sbjct: 359 ENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQ 418
Query: 165 NALLLNETELHGRQLKV 181
+AL +N EL R +++
Sbjct: 419 SALEMNGQELLQRAVRL 435
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 109 SRSIYVGNVDYACTPEEVQ----QHFQ-SCGTVNRVTILTD-KFGQPKGFAYVEFVEIDA 162
S++++V D +E++ +HF +CG RV+I D + G KGFAY++F + D+
Sbjct: 462 SQTVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDS 521
Query: 163 VQNALLLNETELHGRQLKV 181
AL L+E+EL G QL V
Sbjct: 522 FSKALELHESELDGYQLSV 540
>gi|425777998|gb|EKV16145.1| Translation initiation factor 4B [Penicillium digitatum Pd1]
Length = 481
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVEFVEIDAVQNALLL 169
+ +VGN+ + T ++ + F CG N V ++ DK + PKGF YVEF ++ +Q AL L
Sbjct: 84 TCHVGNLSFESTDADISEFFAGCGVTN-VRLVEDKLTKAPKGFGYVEFETVEGLQKALDL 142
Query: 170 NETELHGRQLKVS 182
+ + GR ++ S
Sbjct: 143 SGSSFQGRSIRTS 155
>gi|342321010|gb|EGU12948.1| Hypothetical Protein RTG_00989 [Rhodotorula glutinis ATCC 204091]
Length = 339
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILT------DKFGQP------KGFAYVEFVE 159
++VGN+ Y T +E+++HF+ CG V V +LT D +P KG A++EF
Sbjct: 129 LFVGNMPYTITVDEIKKHFEPCGEVPTVRLLTPKNASSDSTSKPTSKPTSKGCAFLEFTS 188
Query: 160 IDAVQNALLLNETELHGRQLKV 181
A+Q+AL L+ + L R++ V
Sbjct: 189 ATALQSALRLHHSTLSSRKINV 210
>gi|357473909|ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein [Medicago truncatula]
Length = 635
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQ 164
E S++++VGN+ ++ ++++ FQ CG V V +D+ G+ KGF +VEF +A Q
Sbjct: 371 ENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQ 430
Query: 165 NALLLNETELHGRQLKV 181
+AL +N EL R +++
Sbjct: 431 SALEMNGQELLQRAVRL 447
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 109 SRSIYVGNVDYACTPEEVQ----QHFQ-SCGTVNRVTILTD-KFGQPKGFAYVEFVEIDA 162
S++++V D +E++ +HF +CG RV+I D + G KGFAY++F + D+
Sbjct: 474 SQTVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDS 533
Query: 163 VQNALLLNETELHGRQLKV 181
AL L+E+EL G QL V
Sbjct: 534 FSKALELHESELDGYQLSV 552
>gi|358378081|gb|EHK15764.1| hypothetical protein TRIVIDRAFT_38275 [Trichoderma virens Gv29-8]
Length = 300
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y + E++ F S G V R ++ D G+PKGF + ++ + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 168 L-LNETELHGRQLKV 181
LNE E+ GR+L+V
Sbjct: 67 RNLNEYEIMGRKLRV 81
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQ 164
E S++++VGN+ ++ ++++ FQ CG V V +D+ G+ KGF +VEF +A Q
Sbjct: 379 ENSGSKTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQ 438
Query: 165 NALLLNETELHGRQLKVSAKR 185
+AL +N EL R +++ R
Sbjct: 439 SALEMNGQELLQRAVRLDLAR 459
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 109 SRSIYVGNVDYACTPEEVQ----QHFQ-SCGTVNRVTILTD-KFGQPKGFAYVEFVEIDA 162
S++++V D +E++ +HF +CG RV+I D + G KGFAY++F + D+
Sbjct: 482 SQTVFVRGFDKNLGEDEIRAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDS 541
Query: 163 VQNALLLNETELHGRQLKV 181
AL L+E+EL G QL V
Sbjct: 542 FSKALELHESELDGYQLSV 560
>gi|336370674|gb|EGN99014.1| hypothetical protein SERLA73DRAFT_181797 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383445|gb|EGO24594.1| hypothetical protein SERLADRAFT_468158 [Serpula lacrymans var.
lacrymans S7.9]
Length = 484
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLN 170
+ ++GN+ + T E++ +F T++ V I+ D+ +PKGF Y+EF E++ +++AL +
Sbjct: 82 TAFIGNLAFDMTESELESYFAPQQTIS-VKIIKDREDKPKGFGYIEFTELEGLKDALAKS 140
Query: 171 ETELHGRQLKVS 182
+ L GR ++VS
Sbjct: 141 GSNLSGRTIRVS 152
>gi|453084590|gb|EMF12634.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 344
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 104 KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDA 162
+ E R +++GN+ Y + E++ F G V ++ DK GQPKGF ++E+ + DA
Sbjct: 3 QREKGGRVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDA 62
Query: 163 VQNALL-LNETELHGRQLKV 181
+A+ LNE++L+GR L+V
Sbjct: 63 AASAVRNLNESDLNGRTLRV 82
>gi|46105484|ref|XP_380546.1| hypothetical protein FG00370.1 [Gibberella zeae PH-1]
Length = 294
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y T E++ + F S G V R ++ D G+PKGF + ++ + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 168 L-LNETELHGRQLKV 181
LN+ E+ GR+L+V
Sbjct: 67 RNLNDHEIMGRKLRV 81
>gi|413918641|gb|AFW58573.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 199
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNA 166
DSR+++V NV + + + + +HF G V + I+TD GQ G AY+EF+ ++ + A
Sbjct: 24 DSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLHKESAEQA 83
Query: 167 LLLNETELHGRQLKVSAK 184
L LN T R LKV K
Sbjct: 84 LTLNGTSFMSRILKVVRK 101
>gi|408400674|gb|EKJ79751.1| hypothetical protein FPSE_00031 [Fusarium pseudograminearum CS3096]
Length = 295
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y T E++ + F S G V R ++ D G+PKGF + ++ + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 168 L-LNETELHGRQLKV 181
LN+ E+ GR+L+V
Sbjct: 67 RNLNDHEIMGRKLRV 81
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
+IYVGN+ Y TPE++ + F GTV RV++ TD+ G+P+GF +VE D A+
Sbjct: 2 TIYVGNISYDVTPEDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIEE 61
Query: 169 LNETELHGRQLKVSAKR 185
L+ E GRQ++V+ +
Sbjct: 62 LDGAEWLGRQMRVNKAK 78
>gi|224080644|ref|XP_002306193.1| predicted protein [Populus trichocarpa]
gi|222849157|gb|EEE86704.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 85 EKEMGAVQDSSS-TSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 143
E E VQ +++ TS +R +YVGN+ + T ++++Q F+ G V V +
Sbjct: 44 EAEKNLVQSTTAVTSGGLTGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPH 103
Query: 144 DKFGQPKGFAYVEFVEIDAVQNALLLN-ETELHGRQLKVSA 183
D+ G KGF +V+F ++ +NAL LN + E+ GR +KVSA
Sbjct: 104 DESGHCKGFGFVQFARLEDARNALNLNGQVEIAGRPIKVSA 144
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
S+YVGN+ Y T E+++ F GTV +V+I TD+ G+P+GFA+VE ++ D + A +
Sbjct: 2 SVYVGNLSYQVTEEDLRSVFAEYGTVKQVSIPTDRETGRPRGFAFVE-MDADTQEQAAIE 60
Query: 169 -LNETELHGRQLKVSAKR 185
L+ E GR LKV+ R
Sbjct: 61 KLDGAEWMGRDLKVNKAR 78
>gi|411118097|ref|ZP_11390478.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711821|gb|EKQ69327.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y T +++ Q F GTV RV + TD+ G+ +GFA+VE +E DA ++ +
Sbjct: 2 SIYVGNLSYNVTSDDLTQTFAEYGTVKRVQLPTDRETGRLRGFAFVE-METDAEEDKAIE 60
Query: 169 -LNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRG 206
L+ E GR LKV+ R ++ RG ++G +G
Sbjct: 61 ALDGAEWMGRDLKVNKARP-----REERGSSGGSWGNKG 94
>gi|260830184|ref|XP_002610041.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
gi|229295404|gb|EEN66051.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
Length = 542
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 16/110 (14%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLL 169
SI+VGN+ + + V +HF CG V V I+ D K G KGF YV F + +V A+ L
Sbjct: 389 SIFVGNLPFDVEDDSVYEHFSQCGEVEGVRIIRDSKSGLGKGFGYVLFQDSASVGLAIRL 448
Query: 170 NETELHGRQLKV--SAKRTNIPGMKQFRGRRPNTFG----FRGRRPFIPG 213
NE GR+++V + K+ + + +FG +G +PF+ G
Sbjct: 449 NEKTFSGRKIRVKRAVKKEKV---------KNTSFGSGSASKGNKPFLKG 489
>gi|407044727|gb|EKE42787.1| enhancer binding protein-2, putative [Entamoeba nuttalli P19]
Length = 229
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+Y+GN+ Y T E ++ HF+S G + ++ + G +GFA+VE+ + + A+ N
Sbjct: 4 LYIGNLSYKTTEENLKTHFESFGKIKEAKLMIFR-GYSRGFAFVEYETEEDAKKAVAANG 62
Query: 172 TELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRP 209
E GR+LKV R + G + T G RG RP
Sbjct: 63 VEFEGRKLKVEIARPPKERKEGSEGEKKTTAGPRGYRP 100
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALL 168
+R +YVGN+ + +++++ F+S G+V V + D+ G KGF +V+F ++ +NAL
Sbjct: 333 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 392
Query: 169 LN-ETELHGRQLKVSA--KRTNIP 189
LN + E+ GR +KVSA +T +P
Sbjct: 393 LNGQLEIAGRAIKVSAVTDQTEVP 416
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALL 168
+R +YVGN+ + +++++ F+S G+V V + D+ G KGF +V+F ++ +NAL
Sbjct: 322 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 381
Query: 169 LN-ETELHGRQLKVSA--KRTNIP 189
LN + E+ GR +KVSA +T +P
Sbjct: 382 LNGQLEIAGRAIKVSAVTDQTEVP 405
>gi|398016175|ref|XP_003861276.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499501|emb|CBZ34574.1| hypothetical protein, conserved [Leishmania donovani]
Length = 243
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 104 KEEVDSRSIYVGNVDY------ACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVE 156
++ DSRSI++GN+ A TPEE+ Q F CG + T+L D+ G+PKG AY+E
Sbjct: 127 SKDTDSRSIFIGNLPRGTDGTPATTPEELVQFFADCGNILNCTVLKDRATGEPKGTAYIE 186
Query: 157 FVEIDAVQNAL-LLNETELHGRQLKVSAKRTNI 188
F + A+ A+ N G + V + I
Sbjct: 187 FADYTAMGKAIDTKNNANFKGSTIIVCVSTSPI 219
>gi|339898436|ref|XP_003392587.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321399568|emb|CBZ08755.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 245
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 104 KEEVDSRSIYVGNVDY------ACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVE 156
++ DSRSI++GN+ A TPEE+ Q F CG + T+L D+ G+PKG AY+E
Sbjct: 129 SKDTDSRSIFIGNLPRGTDGTPATTPEELVQFFADCGNILNCTVLKDRATGEPKGTAYIE 188
Query: 157 FVEIDAVQNAL-LLNETELHGRQLKVSAKRTNI 188
F + A+ A+ N G + V + I
Sbjct: 189 FADYTAMGKAIDTKNNANFKGSTIIVCVSTSPI 221
>gi|288942469|ref|YP_003444709.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
gi|288897841|gb|ADC63677.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
Length = 94
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEF---VEIDAVQNAL 167
IYVGN+ Y+ T +++++ F + G V ++TDKF G KGFA+VE E DA
Sbjct: 3 IYVGNLAYSVTQDDLREAFGAYGNVESANLITDKFTGDSKGFAFVEMPSNSEADAAIKG- 61
Query: 168 LLNETELHGRQLKV 181
LNET L GR L+V
Sbjct: 62 -LNETPLKGRPLRV 74
>gi|110597824|ref|ZP_01386107.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
gi|110340549|gb|EAT59032.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
Length = 90
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL-L 169
IY+GN+DY+ T ++++ F G V+ +++ DKF G+ KGF +VE +A+ L
Sbjct: 3 IYIGNLDYSVTEADLRETFGEFGEVSSASVINDKFTGRSKGFGFVEMANDAEAASAIADL 62
Query: 170 NETELHGRQLKV 181
N+++L+GR +KV
Sbjct: 63 NDSDLNGRTIKV 74
>gi|449531099|ref|XP_004172525.1| PREDICTED: uncharacterized protein LOC101223830, partial [Cucumis
sativus]
Length = 500
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 109 SRSIYVGNVDYACTPEEV----QQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
S++++V D + +E+ Q HF +CG +NRV+I D + G KG AY++F + D+
Sbjct: 339 SQTVFVRGFDRSLGEDEIRSALQDHFGACGDINRVSIPKDYETGNVKGMAYMDFGDSDSF 398
Query: 164 QNALLLNETELHGRQLKV 181
AL LN +ELHG L V
Sbjct: 399 NKALELNGSELHGNYLTV 416
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 64 KKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
KK ++E E A ++ AK K +D+ T T + + +S++++VGN+ +
Sbjct: 199 KKADTDVEMEEAASPKLVAKQSK-----KDAPKTPVTPKD-QSGESKTLFVGNLSFQIEQ 252
Query: 124 EEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSA 183
+++ F+ G V +D G+ KGF +VEF + + AL LN L R++++
Sbjct: 253 ADLENFFKDVGKPVHVRFASDHDGRFKGFGHVEFESPEVAKKALELNGELLLNREVRLDM 312
Query: 184 KRTNIPGMKQFRGRRPNTFGFRGRRP 209
R R N+F GR P
Sbjct: 313 AREKGSYTPYDSRERNNSFQKGGRGP 338
>gi|358391586|gb|EHK40990.1| hypothetical protein TRIATDRAFT_249243 [Trichoderma atroviride IMI
206040]
Length = 300
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y + E++ F S G V R ++ D G+PKGF + ++ + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 168 L-LNETELHGRQLKV 181
LNE E+ GR+L+V
Sbjct: 67 RNLNEYEIMGRKLRV 81
>gi|189499100|ref|YP_001958570.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
gi|189494541|gb|ACE03089.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
Length = 90
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
+IY+GN+ Y+ + EE+ F G V+R I+ DK G+ KGF +VE D QNA+
Sbjct: 2 NIYIGNLPYSLSEEELSDAFAQFGQVDRANIIMDKETGRSKGFGFVEMPNDDEAQNAIDS 61
Query: 169 LNETELHGRQLKVS 182
L++++L+GR +KV+
Sbjct: 62 LHDSDLNGRSIKVN 75
>gi|406954527|gb|EKD83359.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 95
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
+IYVGN+ Y+ T E+++ F G V +I+ D+ G+ KGF +VE A + A+
Sbjct: 2 NIYVGNLPYSATEEQLKTMFGVYGEVTTASIIKDRDTGRSKGFGFVEMTNDAAAEEAIQA 61
Query: 169 LNETELHGRQLKVSAKR 185
LNET+++GR +KV+ R
Sbjct: 62 LNETDMNGRNIKVNQAR 78
>gi|322692273|gb|EFY84203.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 552
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ Y T E V + F+ C V+ V I+ D+ +PKGF YVEF +I+ ++ AL L
Sbjct: 80 TAHLGNLAYDATNETVTEFFEGCEIVS-VRIIEDREMQRPKGFGYVEFADIEGLKKALTL 138
Query: 170 NETELHGRQLKV 181
+ +GR +K+
Sbjct: 139 DGESFNGRMIKI 150
>gi|403417997|emb|CCM04697.1| predicted protein [Fibroporia radiculosa]
Length = 480
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLN 170
+ ++GN+ + T E++ F + T+ V I+ D+ +PKGF Y+EF ++D+++ AL
Sbjct: 80 TAFIGNLAFDLTETELEDFFNAA-TIKSVKIIRDRDDKPKGFGYIEFTDLDSLKEALNKT 138
Query: 171 ETELHGRQLKVS 182
+ L GR ++VS
Sbjct: 139 NSNLAGRAIRVS 150
>gi|224047848|ref|XP_002191823.1| PREDICTED: RNA-binding protein 34 [Taeniopygia guttata]
Length = 428
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTV-NRVTILTDKFGQPKGFAYVEFVEIDAVQNA 166
+ RS++VGN+ Y + V++HFQ CG + + + G KGF YV F DAV A
Sbjct: 274 NKRSVFVGNLSYDIRDDAVREHFQVCGDIVGVRVVRDRRTGLGKGFGYVLFENTDAVHLA 333
Query: 167 LLLNETELHGRQLKV 181
L LN + L GR+++V
Sbjct: 334 LKLNNSVLMGRKIRV 348
>gi|195390115|ref|XP_002053714.1| GJ23196 [Drosophila virilis]
gi|194151800|gb|EDW67234.1| GJ23196 [Drosophila virilis]
Length = 439
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 169
R+++VGN+ Y + +++++ F SCG ++ + L D KG AYV F + DAV AL L
Sbjct: 266 RTVFVGNLKYTASEQKLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALEL 325
Query: 170 NETELHGRQLKVSAKRTNIPGMKQFR 195
NET L R + V G KQ R
Sbjct: 326 NETLLDDRPIHVERYSVKKLGAKQAR 351
>gi|170090534|ref|XP_001876489.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647982|gb|EDR12225.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 444
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 30 EHEHDHDHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMG 89
E D D D E + DA +E E P + + +R ++ ++EA A +++A + K+
Sbjct: 28 EENFDSDTD-EVDSDASDEEEAAPAILGEPVLSHAERRRQ-KKEAKAKGKLEASLAKKR- 84
Query: 90 AVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP 149
++D S+ + + K + S++VGN+ + T E ++ F CG + R+ + T P
Sbjct: 85 KLKDGSAVAVPVSAKRQ---NSVWVGNMSFKTTQENLRTFFDGCGEITRINMPTKAPAGP 141
Query: 150 ------KGFAYVEFVEIDAVQNALLLNETELHGRQLKVS-----AKRTNIPGM 191
+GFAYV+F + A+ +E L GR+L + A R PG+
Sbjct: 142 GLIPENRGFAYVDFSTPEGKAAAIARSEQPLVGRKLLIKDGDDFAGRPLAPGV 194
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 38/139 (27%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVN-----------------------RVTILTDKFG 147
++++GN+ + T + ++Q F++ V+ R+ D G
Sbjct: 226 TLFIGNLGFETTDDAIRQLFEAHRVVSKNKEVKEEEGEEKKTKDVWIRKVRMGTFEDS-G 284
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETE--LHGRQLKV-----------SAKRTNIPGMKQF 194
KGFA+V+F ID ++L+N L+GR L V + K + G
Sbjct: 285 LCKGFAFVDFTSIDHA-TSVLINPKNHHLNGRDLVVQYAGADAVRRGAVKTKPVDGAAPK 343
Query: 195 RGRRPNTFGFRGRRPFIPG 213
+GRRP + G++ +RP + G
Sbjct: 344 KGRRPLSAGYKPKRPQLQG 362
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFV-EIDAVQNAL 167
R+++VGN+ + T E++ F++ G + R+ I+TD+ GQ +GFA+VE + DA +
Sbjct: 2 RNVFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIA 61
Query: 168 LLNETELHGRQLKVS 182
LN T+L GR L V+
Sbjct: 62 GLNGTQLDGRALNVN 76
>gi|383763833|ref|YP_005442815.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381384101|dbj|BAM00918.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 105
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEF-VEIDAVQNALLL 169
IYVGN+ Y T +E+++ F++ G V+ +I+ D+ GQ KGF +VE + +A+ L
Sbjct: 3 IYVGNLSYRTTEDELRRTFEAYGAVSSASIIRDRESGQSKGFGFVEMPSDSEALAAINAL 62
Query: 170 NETELHGRQLKVSAKR 185
N+ E+ GR+LKV+ R
Sbjct: 63 NDKEVGGRRLKVNQAR 78
>gi|66576254|gb|AAY51685.1| RNA-binding protein [Chlorobium tepidum TLS]
Length = 90
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALL- 168
+IY+GN+DY T ++ F GTV++ ++ DKF G+ KGF +VE + DA N +
Sbjct: 2 NIYIGNLDYNVTEADLSGAFGEFGTVSKANVIIDKFTGRSKGFGFVEMPD-DAEANEAIS 60
Query: 169 -LNETELHGRQLKVS 182
LNE+ L+GR+++V+
Sbjct: 61 QLNESSLNGRKIRVN 75
>gi|393246033|gb|EJD53542.1| hypothetical protein AURDEDRAFT_80002 [Auricularia delicata
TFB-10046 SS5]
Length = 464
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTI---LTDKFGQP---------KGFAYVEFV 158
SI+VGN+ + TP ++ F G + RV + L G P +GFAYV+F
Sbjct: 104 SIWVGNLSFKTTPASLKAFFDGVGEITRVHMPMKLPTSGGDPAEGKRRLDNRGFAYVDFA 163
Query: 159 EIDAVQNALLLNETELHGRQLKV 181
DA Q A+ ++E EL GR+L +
Sbjct: 164 SADAKQVAIAMSEQELDGRKLLI 186
>gi|332709842|ref|ZP_08429799.1| RRM domain RNA-binding protein [Moorea producens 3L]
gi|332351440|gb|EGJ31023.1| RRM domain RNA-binding protein [Moorea producens 3L]
Length = 96
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
+IY+GN+DY T E +Q+ FQ GTV++V + D+ GQ +GFA+V+ D ++A+
Sbjct: 2 TIYIGNLDYQVTSENLQEVFQDYGTVSKVVVPKDRETGQGRGFAFVDMGTTDQEESAIAE 61
Query: 169 LNETELHGRQLKVSAKR 185
L+ E GR ++V R
Sbjct: 62 LDGAEWMGRSMRVRKAR 78
>gi|340520767|gb|EGR51003.1| predicted protein [Trichoderma reesei QM6a]
Length = 307
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y + E++ F S G V R ++ D G+PKGF + ++ + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 168 L-LNETELHGRQLKV 181
LNE E+ GR+L+V
Sbjct: 67 RNLNEYEIMGRKLRV 81
>gi|449542314|gb|EMD33293.1| hypothetical protein CERSUDRAFT_117920 [Ceriporiopsis subvermispora
B]
Length = 478
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLN 170
+ ++GN+ + T +++ +F T + V I+ D+ +PKGF Y+EF E+D ++ AL +
Sbjct: 76 TAFIGNLPFDLTDGDLEDYFAGQATKS-VKIIKDRDDRPKGFGYIEFAELDGLKEALAKS 134
Query: 171 ETELHGRQLKVS 182
T L GR ++VS
Sbjct: 135 GTTLAGRTIRVS 146
>gi|427417097|ref|ZP_18907280.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425759810|gb|EKV00663.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 91
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
SIYVGN+ Y T E++ F GTV RV + TD+ G+P+GFA+VE D +A+
Sbjct: 2 SIYVGNLSYDATQEDINAVFAEYGTVQRVHLPTDRETGRPRGFAFVEMSSEDEETSAIEA 61
Query: 169 LNETELHGRQLKVSAKR 185
L+ E GR L+V+ R
Sbjct: 62 LDGAEWMGRDLRVNKAR 78
>gi|429329983|gb|AFZ81742.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 1110
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 59 DLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVD 118
+LED+K ++ E K+EK+M TS R++Y+ N+
Sbjct: 955 ELEDVKFQVTPSIPMINKTSERVRKIEKKMPTTLSKDKTS-----------RTVYITNLS 1003
Query: 119 YACTPEEVQQHF-QSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGR 177
Y T +E+ F +SCG V V I D+ G+ +G+ +VEF + +ALLL+ L R
Sbjct: 1004 YKTTEDELSSFFTKSCGPVKAVQICLDRMGKSRGYGFVEFCDERTAMDALLLSTLVLDDR 1063
Query: 178 QLKVSAKRTN 187
++ VS R+N
Sbjct: 1064 EILVS--RSN 1071
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
++SA EE+ +R +YVGN+ T +E++ F GTV R ++ DK+ G+ + F +
Sbjct: 55 ASSAVLEAPEELATRKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGF 114
Query: 155 VEFVEIDAVQNAL-LLNETELHGRQLKVSAKRTNIPGM 191
V ++ A+ LNETE+ GR++KV+ + +P +
Sbjct: 115 VTMSSVEEANAAIESLNETEVGGRKIKVNVTESFLPNI 152
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 98 SATQAEKEEVDSR-SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP--KGFAY 154
SA + E VDS+ +YVGN+ T E ++ F G V T+ + G P KG+ +
Sbjct: 155 SAPEPEPAFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGEVLSATV-SRIPGTPKSKGYGF 213
Query: 155 VEFVEIDAVQNAL-LLNETELHGRQLKV 181
V F + V+ A+ N TEL G+ ++V
Sbjct: 214 VTFSSEEEVEAAVSTFNNTELEGQPIRV 241
>gi|313243391|emb|CBY42167.1| unnamed protein product [Oikopleura dioica]
Length = 199
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQ 164
E +RS++VGN+ Y T E+++ F G V ++ D+ G+PKG+ + E+ + D
Sbjct: 21 EKAARSVFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKDTDTAM 80
Query: 165 NALL-LNETELHGRQLKV 181
+A+ LN ELHGR L+V
Sbjct: 81 SAMRNLNTRELHGRNLRV 98
>gi|393218189|gb|EJD03677.1| hypothetical protein FOMMEDRAFT_167018 [Fomitiporia mediterranea
MF3/22]
Length = 358
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 98 SATQAEKEEVDSRS----IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP---- 149
SA E E+ D++ ++VGN+ Y + E +Q HF C + +LT K +P
Sbjct: 143 SANSEENEKPDTQKSRYILFVGNLKYTTSKEAIQAHFAHCDPPPIIRLLTPKPTKPSPSA 202
Query: 150 ----KGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
KG A++EF +A+Q AL L+ + L GRQ+ V
Sbjct: 203 TTKSKGCAFLEFTHRNALQQALKLHHSTLDGRQINV 238
>gi|427418082|ref|ZP_18908265.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760795|gb|EKV01648.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
S+YVGN+ Y T E+V F GTV + TD+ G+P+GFA+VE +E DA + A +
Sbjct: 2 SVYVGNLSYDATKEDVTDVFAEYGTVKSAHLPTDRETGRPRGFAFVE-METDAEETAAIE 60
Query: 169 -LNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPF 210
L+ E GR LKV+ + P RG +G +G R +
Sbjct: 61 ALDGAEWMGRVLKVNKAKPREP-----RGGSGGNWGNKGDRRY 98
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
SI+V +D+ T E+++ F+ G VNRVTI D+ G+P+GFA+VE + A+
Sbjct: 3 SIFVAKLDFNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAIEA 62
Query: 169 LNETELHGRQLKV 181
L+++ ++GR + V
Sbjct: 63 LDDSSVNGRNIAV 75
>gi|407004871|gb|EKE21139.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 109
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL- 167
S+ +Y+GN+ Y T ++++++F G+V T++ + G+ KGFA+VE +A Q A+
Sbjct: 2 SKKLYIGNLLYEITEDDLKEYFGQAGSVASATVIRFQDGKSKGFAFVEMETEEAAQKAID 61
Query: 168 LLNETELHGRQLKVSAKRTNIPGMKQFRG 196
LN + GR++ V+ R P +FRG
Sbjct: 62 TLNGQDYKGRKIVVAEARPPQPRENRFRG 90
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
++Y+G + Y + V + F G + RV++ TD+ G PKGF YVEF ++D AL
Sbjct: 312 TLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAALEA 371
Query: 169 LNETELHGRQLKV 181
+N EL GR+++V
Sbjct: 372 MNGKELSGRRIRV 384
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 91 VQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-P 149
Q + S T E E + ++YVG + + E + FQSCG V ++ D Q
Sbjct: 195 AQAPAKKSRTDGEAEP--TANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKS 252
Query: 150 KGFAYVEFVEIDAVQNALLLNETELHGRQLKV--SAKRTNIP 189
KGF +V F + A+ + E+ GR ++ +A++T+ P
Sbjct: 253 KGFGFVRFKTAEEAAKAVAMTGHEIDGRAIRCDFAAEKTDNP 294
>gi|366987885|ref|XP_003673709.1| hypothetical protein NCAS_0A07700 [Naumovozyma castellii CBS 4309]
gi|342299572|emb|CCC67328.1| hypothetical protein NCAS_0A07700 [Naumovozyma castellii CBS 4309]
Length = 127
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 13/107 (12%)
Query: 101 QAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGT---VNRVTILTDKFGQPKG------ 151
++ + E+DSRS+++ + TP E++ +F + G + R+T+ ++ + KG
Sbjct: 23 KSRQHEIDSRSVFIKGLHQDITPNEIESYFNTIGCGDAILRITVFDER--RKKGRKNKNV 80
Query: 152 --FAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRG 196
AYVEF +++ AL LNE G L+V KRTN+P K+ G
Sbjct: 81 TLCAYVEFQSLESHTRALELNECVFDGGMLRVFKKRTNLPASKRHNG 127
>gi|428224332|ref|YP_007108429.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
gi|427984233|gb|AFY65377.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
Length = 90
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
+IYVGN+ Y T E+V+ F GTV RV + TD+ G+ +GFA+V+ + D+ +++ +
Sbjct: 2 TIYVGNLSYQATEEDVRSVFAEYGTVERVVLPTDRETGRMRGFAFVDLTD-DSTEDSAIE 60
Query: 169 -LNETELHGRQLKVS 182
LN E GRQL+V+
Sbjct: 61 ELNGAEWMGRQLRVN 75
>gi|392564612|gb|EIW57790.1| hypothetical protein TRAVEDRAFT_38170 [Trametes versicolor
FP-101664 SS1]
Length = 483
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLN 170
+ +VGN+ + T E+++ F G V I+ D+ +PKGF YVEF ++DA+++AL
Sbjct: 67 TAFVGNLTFDITETELEEFF--GGGTKSVKIIKDRDEKPKGFGYVEFADLDALKDALAKT 124
Query: 171 ETELHGRQLKVS 182
+ L GR ++VS
Sbjct: 125 GSPLAGRGVRVS 136
>gi|451995479|gb|EMD87947.1| hypothetical protein COCHEDRAFT_1159154 [Cochliobolus
heterostrophus C5]
Length = 523
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG-QPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T +V F C N V I+ DK +PKGF YVEF +D ++ AL L
Sbjct: 74 TAHLGNLSFDATEGDVTDFFAGCEVTN-VRIVEDKLDRKPKGFGYVEFGSVDGLKKALDL 132
Query: 170 NETELHGRQLKVS 182
+ T GR ++VS
Sbjct: 133 SGTSFQGRNIRVS 145
>gi|67924769|ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416405804|ref|ZP_11687965.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
gi|67853394|gb|EAM48751.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357261220|gb|EHJ10516.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
Length = 94
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEF-VEIDAVQNALL 168
SIYVGN+ Y T +++Q F GTV RV +LTD+ G+P+GF +VE E +
Sbjct: 2 SIYVGNLSYDVTDADLEQVFAEYGTVKRVQLLTDRETGRPRGFGFVEMDTETEEESAIEA 61
Query: 169 LNETELHGRQLKVSAKR 185
L+ E GR L+V+ R
Sbjct: 62 LDGAEWMGRALRVNKAR 78
>gi|113478076|ref|YP_724137.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169124|gb|ABG53664.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 97
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
SIYVGN+ Y T E++ + F GTV RV + TD+ G+P+GF +VE + Q A+
Sbjct: 2 SIYVGNLSYDVTQEDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSEEEEQKAIDA 61
Query: 169 LNETELHGRQLKVS 182
L+ E GR +KV+
Sbjct: 62 LDSAEWMGRDIKVN 75
>gi|374725008|gb|EHR77088.1| putative RNA-binding protein [uncultured marine group II
euryarchaeote]
Length = 477
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 93 DSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGF 152
DS + + ++++ + +YVGN+ + T ++++ F TVN + + TD G+PKGF
Sbjct: 340 DSDDKKSKRGKRKDPEGLKLYVGNLPFKATEDQLKALFDGVATVNELVMATDNAGKPKGF 399
Query: 153 AYVEFVEIDAVQNALL--LNETELHGRQLKV 181
A+ E D +A++ LN TEL GR++KV
Sbjct: 400 AFAFVKETDQ-GDAIVEKLNGTELLGRKIKV 429
>gi|307190796|gb|EFN74665.1| RNA-binding protein 34 [Camponotus floridanus]
Length = 433
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 103 EKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEID 161
+KE + +++++ N+ Y + +HF CG + V ++ DK GQ KGF Y+ F++ +
Sbjct: 249 KKEWNNKKAVFIANLRYGTDNNTIWKHFGICGDIESVHLVRDKETGQTKGFGYINFIDEN 308
Query: 162 AVQNALLLNETELHGRQLKVSAKRTN 187
AV AL L+ TE+ R ++V + N
Sbjct: 309 AVLCALELDGTEIMNRPVRVEPYKIN 334
>gi|302038618|ref|YP_003798940.1| putative RNA-binding protein RbpA [Candidatus Nitrospira defluvii]
gi|300606682|emb|CBK43015.1| putative RNA-binding protein RbpA [Candidatus Nitrospira defluvii]
Length = 108
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL-LL 169
IYVG + Y+ T +++ F G V I+TDKF GQ +GF +VE D Q A+ L
Sbjct: 5 IYVGGLPYSATEQQLSDLFAVHGAVESARIITDKFTGQSRGFGFVEMASSDEAQKAISAL 64
Query: 170 NETELHGRQLKVSAKR 185
N T++ GR L V+ R
Sbjct: 65 NGTDMGGRTLTVNEAR 80
>gi|386346963|ref|YP_006045212.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|339411930|gb|AEJ61495.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 100
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S IYVGN++Y T + ++Q F+ G V V I+TD+ G KGF +VE +A + A+
Sbjct: 2 SFKIYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAI 61
Query: 168 -LLNETELHGRQLKVS 182
LN+ EL GRQL+V+
Sbjct: 62 SALNQHELEGRQLRVN 77
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEF---VEIDAVQNA 166
SIYVGN+ Y T E+++ F G V RV+I TD+ G+P+GFA+VE E DA A
Sbjct: 2 SIYVGNLAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFVEMGAESEEDAAIEA 61
Query: 167 LLLNETELHGRQLKVSA-----KRTNIPGMKQFRGRRPNTF 202
L+ E GR LKV+ + + G + RGR N +
Sbjct: 62 --LDGAEWMGRDLKVNKAKPRENKGSFGGGNRQRGRYSNDY 100
>gi|378726631|gb|EHY53090.1| translation initiation factor eIF-4B [Exophiala dermatitidis
NIH/UT8656]
Length = 540
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG-QPKGFAYVEFVEIDAVQNALLL 169
+ ++ N+ + T ++ F C N V I+ DK +PKGF YVEF +D ++ AL L
Sbjct: 73 TAHLANLSFDATQADINDFFSQCQVTN-VRIVEDKLDRKPKGFGYVEFATLDGLKAALAL 131
Query: 170 NETELHGRQLKVS 182
+ L GRQ++VS
Sbjct: 132 SGNNLAGRQVRVS 144
>gi|451851719|gb|EMD65017.1| hypothetical protein COCSADRAFT_88594 [Cochliobolus sativus ND90Pr]
Length = 523
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG-QPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ + T +V F C N V I+ DK +PKGF YVEF +D ++ AL L
Sbjct: 74 TAHLGNLSFDATEGDVTDFFADCEVTN-VRIVEDKLDRKPKGFGYVEFGSVDGLKKALDL 132
Query: 170 NETELHGRQLKVS 182
+ T GR ++VS
Sbjct: 133 SGTSFQGRNIRVS 145
>gi|299469902|emb|CBN76756.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 774
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 85 EKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 144
E + G + S S A + + DS ++YVGN+D + T +++++ F CG + V I D
Sbjct: 292 EAKKGRLYASMSDPMASAAQPDPDS-TVYVGNLDPSVTEDDIREFFAECGAIASVRIPQD 350
Query: 145 K-FGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIP---GMKQFRGRRPN 200
K G+ +G A+V F + V AL L+ +L G+ +K+ T P G Q + + PN
Sbjct: 351 KETGKMRGIAFVAFAKHSGVLQALTLHMDDLKGQSVKIRRADTAKPRDNGGAQHKKQVPN 410
Query: 201 T 201
Sbjct: 411 A 411
>gi|386761306|ref|YP_006234941.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi PAGU611]
gi|385146322|dbj|BAM11830.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi PAGU611]
gi|396078441|dbj|BAM31817.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi ATCC BAA-847]
Length = 81
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
+++YVGN+ YA T +E+++ F G V V ++ D+ G+PKGF +VE + A++
Sbjct: 2 KTLYVGNLVYAVTQDELRELFSQFGEVFSVKLINDRESGRPKGFGFVEMEDNAALKAIEA 61
Query: 169 LNETELHGRQLKVSAKR 185
LNE + GR L+V+ R
Sbjct: 62 LNEKDFRGRNLRVNEAR 78
>gi|159476702|ref|XP_001696450.1| hypothetical protein CHLREDRAFT_51996 [Chlamydomonas reinhardtii]
gi|158282675|gb|EDP08427.1| predicted protein [Chlamydomonas reinhardtii]
Length = 91
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
+++VGN+ ++ + +++++HF+ CG + V I D G+ KG+A+V+F D Q A
Sbjct: 2 TVFVGNLSWSASEDDIKKHFKDCGKIVSVRIGMDAATGRSKGYAHVDFESADQAQKATSK 61
Query: 170 NETELHGRQLKVSAKRTNIP 189
+EL GR +KV + P
Sbjct: 62 AGSELGGRNIKVEVAQARAP 81
>gi|256085557|ref|XP_002578985.1| hypothetical protein [Schistosoma mansoni]
gi|353233139|emb|CCD80494.1| hypothetical protein Smp_078240 [Schistosoma mansoni]
Length = 949
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLN 170
+++V N+DY+ + E++Q F+ CG V V ++ D G+ KGFAYVEF ++V+ AL L+
Sbjct: 652 TVFVSNLDYSVSEEQIQHTFEKCGNVTSVRLVRDYAGRSKGFAYVEFENKESVKTALTLD 711
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL 167
+ ++V N+D E+++ F+ G + V + T + G PKG AY+EF D AL
Sbjct: 774 EPEKLFVRNLDKTVKNEDLEMLFKQYGNIVSVRLATYRNGVPKGHAYIEFTNADDASKAL 833
Query: 168 L-LNETELHGRQLKVSAKRTNIPGMKQFRGRRPNT 201
+ N E + L VS + G +G + T
Sbjct: 834 VATNGLEFRNKILSVSISEPPVRGESGPQGSKSIT 868
>gi|428210291|ref|YP_007094644.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012212|gb|AFY90775.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 101
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y TPE++ F G+V RV + TD+ G+ +GFA+VE ++ DA + +
Sbjct: 2 SIYVGNLSYEVTPEDLSAAFAQYGSVKRVQLPTDRETGRVRGFAFVE-MDTDAEETTAID 60
Query: 169 -LNETELHGRQLKVS-AKRTNIPGMKQFRGRRPNTFGFRGRR 208
L+ E GR +KV+ AK G GRR N+ G RR
Sbjct: 61 ALDGAEWMGRNMKVNKAKPREDRGSSD--GRRGNSNGGYSRR 100
>gi|116181910|ref|XP_001220804.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
gi|88185880|gb|EAQ93348.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
Length = 315
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y T E++ + F G V ++ D+ G+PKGF + EF + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAV 66
Query: 168 L-LNETELHGRQLKV 181
LN+ E+ GR+L+V
Sbjct: 67 RNLNDYEIMGRKLRV 81
>gi|405960659|gb|EKC26560.1| hypothetical protein CGI_10004059 [Crassostrea gigas]
Length = 219
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLLN 170
++VGN+ Y+ T E++++HF+ G V V I +K G+ KGFAYVEF + AL L+
Sbjct: 115 LFVGNLPYSVTKEQLEEHFRKTGGVKAVRIPKEKGTGKSKGFAYVEFKNRISHGIALRLH 174
Query: 171 ETELHGRQLKV 181
T L GR++ V
Sbjct: 175 HTTLGGRKINV 185
>gi|406866939|gb|EKD19978.1| translation initiation factor eIF4B [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 575
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNALLL 169
++++GN+ + T +V F C N V I+ DK +PKGF Y EF D ++ AL L
Sbjct: 78 TVHLGNLSFEATVGDVTDFFAGCECTN-VRIIEDKMEMKPKGFGYAEFASRDGLKQALTL 136
Query: 170 NETELHGRQLKVS 182
N + GR +++S
Sbjct: 137 NGSSFQGRNIRIS 149
>gi|254564703|ref|XP_002489462.1| Protein of unknown function, localizes to the nucleolus and
nucleoplasm [Komagataella pastoris GS115]
gi|238029258|emb|CAY67181.1| Protein of unknown function, localizes to the nucleolus and
nucleoplasm [Komagataella pastoris GS115]
gi|328349891|emb|CCA36291.1| Uncharacterized RNA-binding protein C660.15 [Komagataella pastoris
CBS 7435]
Length = 385
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT-DKFGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ + T E++++HFQ CG + ++ + T + G+ KGFA+++F++++ NAL
Sbjct: 208 SRILFVGNLSFDTTKEDLEEHFQHCGNIVKIRMATFEDSGKCKGFAFIDFLDVEGATNAL 267
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 67 LKEIE---EEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTP 123
L+E+E ++A L + Q ++ K+ +++ + + + V+ +++GN+ + T
Sbjct: 54 LEELEINLDDAAPLSKKQKRMAKKEKSLEGKPKKESDKPASKSVNG--VWIGNLTFDTTR 111
Query: 124 EEVQ-------QHFQSCGTVNRVTILTDKFGQPK--GFAYVEFVEIDAVQNALLLNETEL 174
+E++ +H T +T + PK GFAYV+F + + V + L+E L
Sbjct: 112 DELRSFLIANTEHLDMKITPENITRINLPKKGPKIRGFAYVDFDKPELVPVCISLSEQSL 171
Query: 175 HGRQLKV 181
+GR L +
Sbjct: 172 NGRNLLI 178
>gi|198424069|ref|XP_002127821.1| PREDICTED: similar to nuclear cap binding protein subunit 2 [Ciona
intestinalis]
Length = 185
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 98 SATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ-PKGFAYVE 156
S Q EK S ++YVGN+ Y T E++ + F CG + RV + DKF + P GF +VE
Sbjct: 33 SRMQQEKLLKMSSTLYVGNLSYYTTEEQIYELFSKCGDLKRVVMGLDKFKKTPCGFCFVE 92
Query: 157 FVEIDAVQNAL-LLNETELHGRQLKV 181
+ E +NA+ +N T L R ++
Sbjct: 93 YCERLCAENAVRYINGTRLDDRVVRT 118
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
+S+++GN+ + + V+ HF+ CG + V I+ D + G KGF YV F DAV AL
Sbjct: 445 KSVFIGNLHFNVDDDSVRNHFKRCGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALE 504
Query: 169 LNETELHGRQLKVSAKRTNIPGMKQFRGR 197
L+ T + R+++V + NI K+ +G+
Sbjct: 505 LDGTTILNREIRV---KPNIDQDKRTKGK 530
>gi|428183384|gb|EKX52242.1| hypothetical protein GUITHDRAFT_102145 [Guillardia theta CCMP2712]
Length = 533
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTI--LTDKF-GQPKGFAYVEFVEIDAVQNALL 168
+++G + + T ++++QHF SC ++++I LTD+ G+P+G A++EF + A + AL
Sbjct: 359 LFLGQLPFDVTADDIKQHFASCAPHDQMSIRVLTDRVTGKPRGIAFLEFKDSTAAEAALS 418
Query: 169 LNETELHGRQLKV 181
L+ + + GR+++V
Sbjct: 419 LDHSIMRGRRIRV 431
>gi|308490983|ref|XP_003107683.1| CRE-CPF-2 protein [Caenorhabditis remanei]
gi|308250552|gb|EFO94504.1| CRE-CPF-2 protein [Caenorhabditis remanei]
Length = 345
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQ 164
E RS++VGN+ Y T E ++ F G V + ++ D+ G+PKG+ ++EF +I+
Sbjct: 14 ERSQRSVFVGNISYDVTEETIRAIFAKAGHVMSIKMVHDRETGKPKGYGFIEFPDINTAD 73
Query: 165 NAL-LLNETELHGRQLKV 181
A+ +LN EL GR L+V
Sbjct: 74 TAIRVLNGYELGGRVLRV 91
>gi|217074842|gb|ACJ85781.1| unknown [Medicago truncatula]
Length = 346
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALL 168
+R +YVGN+ + T ++++ F++ G V V + D G KGF +V+F ++ +NA
Sbjct: 71 ARRLYVGNLHSSITEADLRRVFEAFGQVELVQMPLDDIGHCKGFGFVQFARLEDAKNAQS 130
Query: 169 LN-ETELHGRQLKVSAKRTNIPGMKQFRG 196
LN + E+ GR +KVSA T+ GM++F G
Sbjct: 131 LNSQLEIGGRTIKVSAV-TDQSGMQEFGG 158
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
+IYVGN+ Y T +E++ F G V +I+ D+ G+ KGF +VE + +A + A+
Sbjct: 3 NIYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKAIES 62
Query: 169 LNETELHGRQLKVSAKR 185
LN+ +L GR LK++ R
Sbjct: 63 LNDKDLGGRNLKINEAR 79
>gi|358379936|gb|EHK17615.1| hypothetical protein TRIVIDRAFT_80616 [Trichoderma virens Gv29-8]
Length = 556
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ Y T E V F C V+ V I+ D+ +PKGF YVEF +D ++ AL L
Sbjct: 78 TAHLGNLSYDATSESVTDFFADCDVVS-VRIIEDRELQRPKGFGYVEFGNLDGLKKALTL 136
Query: 170 NETELHGRQLKV 181
+ GR +K+
Sbjct: 137 DGQSFEGRMIKI 148
>gi|443735038|gb|ELU18893.1| hypothetical protein CAPTEDRAFT_226786 [Capitella teleta]
Length = 518
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 169
R+I+VGN+D TPE++ Q F G V V + D+ P FA+VEF E ++ AL+L
Sbjct: 167 RTIFVGNLDSISTPEQLLQFFTQAGEVKYVRMAGDE-TLPTRFAFVEFTEQASLLKALVL 225
Query: 170 NETELHGRQLKV 181
N + GR ++V
Sbjct: 226 NGSLFSGRPVRV 237
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAY 154
++SA EE+ +R +YVGN+ T +E+ F + GTV R ++ DK+ G+ + F +
Sbjct: 55 ASSAVMEAPEELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGF 114
Query: 155 VEFVEIDAVQNAL-LLNETELHGRQLKVSAKRTNIPGM 191
V + V A+ LN+TE+ GR++KV+ + +P +
Sbjct: 115 VTMSTAEEVAAAIESLNDTEVGGRKIKVNVTESFLPNI 152
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 98 SATQAEKEEVDSR-SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP--KGFAY 154
SA ++E VDS+ +YVGN+ T E ++ F G V T+ + G P KG+ +
Sbjct: 155 SAPESEPSFVDSQYKVYVGNLAKKVTTEVLKNFFSEKGEVLSATV-SRIPGTPKSKGYGF 213
Query: 155 VEFVEIDAVQNAL-LLNETELHGRQLKV 181
V F + V+ A+ N TEL G+ ++V
Sbjct: 214 VTFSSEEEVEAAVSTFNNTELEGQTIRV 241
>gi|170588491|ref|XP_001899007.1| RNA binding protein, identical [Brugia malayi]
gi|170588493|ref|XP_001899008.1| RNA binding protein, identical [Brugia malayi]
gi|1813684|gb|AAC47624.1| putative RNA binding protein [Brugia malayi]
gi|158593220|gb|EDP31815.1| RNA binding protein, identical [Brugia malayi]
gi|158593221|gb|EDP31816.1| RNA binding protein, identical [Brugia malayi]
gi|208429687|gb|ACI26725.1| putative RNA binding protein [Wuchereria bancrofti]
gi|402582983|gb|EJW76928.1| RNA-binding protein [Wuchereria bancrofti]
Length = 82
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEF-VEIDAVQNA 166
SRS++VGN+ Y+ E+V F G V V I+ D+ G+P+GF + EF E A Q
Sbjct: 2 SRSVFVGNLPYSAREEDVANFFWQVGPVTSVRIVLDRDTGRPRGFGFCEFETEAAAEQAV 61
Query: 167 LLLNETELHGRQLKV 181
+N E GRQL+V
Sbjct: 62 GSMNHAEFMGRQLRV 76
>gi|367018842|ref|XP_003658706.1| hypothetical protein MYCTH_2294810 [Myceliophthora thermophila ATCC
42464]
gi|347005973|gb|AEO53461.1| hypothetical protein MYCTH_2294810 [Myceliophthora thermophila ATCC
42464]
Length = 317
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y T E++ + F G V ++ D+ G+PKGF + EF + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAV 66
Query: 168 L-LNETELHGRQLKV 181
LN+ E+ GR+L+V
Sbjct: 67 RNLNDYEIMGRKLRV 81
>gi|428313300|ref|YP_007124277.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428254912|gb|AFZ20871.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 97
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
+IYVGN+ Y T E+++ F GTV RV + TD+ G+ +GFA+VE E +A+
Sbjct: 2 TIYVGNLSYQATEEDLRTVFADYGTVKRVVLPTDRETGRMRGFAFVEMTEETQEDSAISE 61
Query: 169 LNETELHGRQLKVSAKR 185
L+ E GRQL+V+ R
Sbjct: 62 LDGAEWMGRQLRVNKAR 78
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFV-EIDAVQNALL 168
S++V N+ +C PE+VQ FQ G V V + D G+P+GFA+VEF DA +
Sbjct: 36 SLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 95
Query: 169 LNETELHGRQLKVS 182
+N L GR++ V+
Sbjct: 96 MNRKMLSGREISVA 109
>gi|116624848|ref|YP_827004.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228010|gb|ABJ86719.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 97
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL- 167
++I+VGN+ + T + V+ F++ G V+RV I TD+ GQP+GF +VE + A+
Sbjct: 2 KNIFVGNLSFGATEDTVRALFETHGKVDRVNICTDRDSGQPRGFGFVEMANDSEAEKAIS 61
Query: 168 LLNETELHGRQLKVSAKR 185
+N EL GR L V+ R
Sbjct: 62 AVNGKELDGRALNVNEAR 79
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y T E+++ F G V+RV + TD+ G+P+GFA+VE +E ++ + A +
Sbjct: 2 SIYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVE-METESQETAAIE 60
Query: 169 -LNETELHGRQLKV 181
L+ E GR LKV
Sbjct: 61 ALDGAEWMGRDLKV 74
>gi|332023783|gb|EGI64007.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Acromyrmex echinatior]
Length = 228
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG-QPKGFAYVEFVEID-AVQNALL 168
++YV N+ Y+ T ++ Q +S G + +VTI+ DK + +G A+V+F+ ID AV A
Sbjct: 11 TVYVSNLPYSFTNNDIHQLLESYGKIVKVTIMKDKVTRRSRGVAFVQFLRIDEAVSCAKR 70
Query: 169 LNETELHGRQLKVS 182
LN T+++GR +K S
Sbjct: 71 LNNTKVYGRTVKSS 84
>gi|195027760|ref|XP_001986750.1| GH20357 [Drosophila grimshawi]
gi|193902750|gb|EDW01617.1| GH20357 [Drosophila grimshawi]
Length = 263
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 14/97 (14%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQN 165
+V+ +YV N+++ T ++++ HF GTV + I + G GFA+VE V++ Q
Sbjct: 123 KVNRHVLYVTNLNFETTRDDLEAHFAVAGTVKSIRIPKKRRG---GFAFVEMVDLAGFQQ 179
Query: 166 ALLLNETELHGRQLKV---------SAKRTNIPGMKQ 193
L+ T+L GR++KV SA + NI MKQ
Sbjct: 180 GFKLHNTDLQGRKIKVQISEAGKKKSANKKNI--MKQ 214
>gi|428306262|ref|YP_007143087.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428247797|gb|AFZ13577.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 111
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+ Y T E++ Q F GTV RV + TD+ G+ +GFA+VE +E DA + +
Sbjct: 2 SIYVGNLSYQVTQEDISQTFAEYGTVKRVQLPTDRETGRMRGFAFVE-METDAEEEKAIE 60
Query: 169 -LNETELHGRQLKVS 182
L+ E GR LKV+
Sbjct: 61 ALDGAEWMGRDLKVN 75
>gi|195069101|ref|XP_001996948.1| GH22238 [Drosophila grimshawi]
gi|193891982|gb|EDV90848.1| GH22238 [Drosophila grimshawi]
Length = 370
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 108 DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNAL 167
+ R+I+VGN+ Y+ E++++ F SCG ++ + L D KG AYV F + DAV AL
Sbjct: 272 NKRTIFVGNLKYSANEEKLREIFSSCGEIDYIRCLHDGERGCKGVAYVCFQQPDAVGLAL 331
Query: 168 LLNETELHGRQLKV 181
LNET L R + V
Sbjct: 332 ELNETMLDERPIHV 345
>gi|109900313|ref|YP_663568.1| RNA-binding region RNP-1 [Pseudoalteromonas atlantica T6c]
gi|109702594|gb|ABG42514.1| RNA-binding region RNP-1 [Pseudoalteromonas atlantica T6c]
Length = 151
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 95 SSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFA 153
S TS+ + +E +S+++YVGN+ Y + VQQHF+ G V+ V ++ D + G+ KG+
Sbjct: 55 SGTSSVAQQADEENSKTLYVGNLPYRANEQAVQQHFELQGQVHSVRLMKDRRTGKRKGYG 114
Query: 154 YVEFVEI---DAVQNALLLNETELHGRQLKV 181
+VE A+QN LN++E R LKV
Sbjct: 115 FVEMTAAGAEKAIQN---LNDSEFQERTLKV 142
>gi|405974855|gb|EKC39468.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Crassostrea gigas]
Length = 219
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEID-AVQNALLL 169
++YVGN+ ++ T ++ + F+ G V +VT+L D + KG A++ F+E + A++ L
Sbjct: 11 TVYVGNLPFSLTNNDIHKIFEKYGRVAKVTVLKDDARRSKGVAFIMFIEKESAIKAVRAL 70
Query: 170 NETELHGRQLKVSAKRTN 187
N+TE+ GR +K + + N
Sbjct: 71 NKTEMFGRTIKCNIAKDN 88
>gi|146101305|ref|XP_001469083.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|398023353|ref|XP_003864838.1| RNA binding protein, putative [Leishmania donovani]
gi|134073452|emb|CAM72182.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|322503074|emb|CBZ38158.1| RNA binding protein, putative [Leishmania donovani]
Length = 197
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGT--VNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SI++GNV Y T E+V FQ G V RV ++ D+ G KGF YVEF+ +VQ A+
Sbjct: 13 SIFLGNVAYNTTEEDVWSFFQEHGIADVKRVRLVRDRETGDCKGFGYVEFMHASSVQPAI 72
Query: 168 LLNETELHGRQLKV 181
+L+GR+L++
Sbjct: 73 ETRGDKLNGRELRI 86
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S +++VGN+ + T + V + FQ G++N V + TD+ G PKGF YVEF I+ ++A+
Sbjct: 360 SATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAM 419
Query: 168 -LLNETELHGRQLKV 181
L ++ GR +++
Sbjct: 420 ENLTGVDIAGRPIRL 434
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-LL 169
++VGN+ + E + + F+ G + V ++TD+ G+ KG+ YVEF D AL
Sbjct: 255 LFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEAR 314
Query: 170 NETELHGRQLKV 181
+ L R+L+V
Sbjct: 315 HGYTLDNRELRV 326
>gi|83643064|ref|YP_431499.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631107|gb|ABC27074.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 90
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEF---VEIDAVQNA 166
+IYVGN+ Y T EE+++ F S G V ++ D+ GQ KGFA+VE E DA
Sbjct: 2 NIYVGNLAYGVTEEELREAFSSFGEVTSANLIIDRNTGQSKGFAFVEMSNNSEADAAIKG 61
Query: 167 LLLNETELHGRQLKVS 182
LN+T L GR +KV+
Sbjct: 62 --LNDTALKGRNIKVN 75
>gi|242814322|ref|XP_002486347.1| RNA binding protein Rnp24, putative [Talaromyces stipitatus ATCC
10500]
gi|218714686|gb|EED14109.1| RNA binding protein Rnp24, putative [Talaromyces stipitatus ATCC
10500]
Length = 385
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT-DKFGQPKGFAYVEFVEIDAVQNAL 167
SR I+VGN+ + T E VQ+HF+ CG + V + T + G+ KG+ +VEF I+A Q+A+
Sbjct: 188 SRRIFVGNLGFDATKETVQEHFEPCGAITNVHLATFEDSGKCKGYGWVEFETIEAAQHAV 247
>gi|32265818|ref|NP_859850.1| hypothetical protein HH0319 [Helicobacter hepaticus ATCC 51449]
gi|32261867|gb|AAP76916.1| hypothetical protein HH_0319 [Helicobacter hepaticus ATCC 51449]
Length = 83
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
+++YVGN+ YA T +EVQ F G V V ++ D+ G+PKGF +VE + A +
Sbjct: 2 KTLYVGNLVYAVTRDEVQDLFSQFGEVFSVKLINDRESGKPKGFGFVEMDDEAAPKAIDA 61
Query: 169 LNETELHGRQLKVSAKR 185
LNE + GR L+V+ R
Sbjct: 62 LNEKDFRGRNLRVNEAR 78
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
+IYVGN+ Y T EE++ F++ G V V I+ D+ G+ +GFA+VE + + QNA+
Sbjct: 2 NIYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFVEMEDGEGAQNAVAE 61
Query: 169 LNETELHGRQLKVSAKR 185
+N +L GR L V+ R
Sbjct: 62 MNGKDLKGRNLVVNEAR 78
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
+SIYVGN+ ++ + +E+++ F + G V+ V ++TD+ G+P+GF +V + DA
Sbjct: 2 KSIYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTMSDTDAASAIEA 61
Query: 169 LNETELHGRQLKVS 182
L+ + GR L+V+
Sbjct: 62 LDGKDFGGRNLRVN 75
>gi|71745988|ref|XP_827596.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831761|gb|EAN77266.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 305
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 95 SSTSATQAEKEEVDSRS-----IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP 149
SS S Q + E+ D R ++VGN+ + + V+ HF+S G V ++ DK G+P
Sbjct: 11 SSASCPQRDPEDGDRRQNHGNILFVGNIPFQTPWQHVKDHFRSAGKVRYTDLIADKTGRP 70
Query: 150 KGFAYVEFVEI-DAVQNALLLNETELHGRQLKV 181
KG A V DA+Q + +ET+ GR+L V
Sbjct: 71 KGSALVTMATREDALQAIRMFDETDFEGRRLIV 103
>gi|50555293|ref|XP_505055.1| YALI0F05918p [Yarrowia lipolytica]
gi|74689345|sp|Q6C2Q7.1|NOP12_YARLI RecName: Full=Nucleolar protein 12
gi|49650925|emb|CAG77862.1| YALI0F05918p [Yarrowia lipolytica CLIB122]
Length = 509
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
R ++VG +D+ E + + F SCG V V I+ D K KGFAYV+F ++++V+ ALL
Sbjct: 274 RCVFVGALDFEEQEESLWEAFSSCGDVEYVRIVRDPKTNVGKGFAYVQFKDVNSVEQALL 333
Query: 169 LN--------ETELHGRQLKVS 182
LN ++ + R+L+VS
Sbjct: 334 LNGKGINELSKSTTNKRKLRVS 355
>gi|206900968|ref|YP_002250013.1| RNA-binding protein [Dictyoglomus thermophilum H-6-12]
gi|206740071|gb|ACI19129.1| RNA-binding protein [Dictyoglomus thermophilum H-6-12]
Length = 92
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S+++YVGN+ ++ T EE++ F S GTV I++D+ G+ KGF +VE E +A +
Sbjct: 2 SKTLYVGNLPWSTTEEELKNIFASHGTVYSARIISDRNTGRSKGFGFVEVDESEAEKMIS 61
Query: 168 LLNETELHGRQLKV 181
LN TE+ GR++ V
Sbjct: 62 ALNNTEVKGRRIIV 75
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIY+GN+ Y T E+++ F G V+RV + TD+ G+P+GFA+VE +E +A + A +
Sbjct: 2 SIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVE-METEAQETAAIE 60
Query: 169 -LNETELHGRQLKV 181
L+ E GR LKV
Sbjct: 61 ALDGAEWMGRDLKV 74
>gi|195453715|ref|XP_002073909.1| GK12898 [Drosophila willistoni]
gi|194169994|gb|EDW84895.1| GK12898 [Drosophila willistoni]
Length = 421
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 91 VQDSSSTSATQAEKEEVDS---RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 147
V ++ T A +K D+ R ++VGN+ Y+ T +++ F SCG ++ + L D
Sbjct: 229 VTLATQTGAGDGDKASSDADAKRCVFVGNLKYSATEKKLHDVFSSCGEIDNIRCLQDGTK 288
Query: 148 QPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFR 195
G AYV F DAV AL LN+T + R + V G KQ R
Sbjct: 289 GCSGVAYVNFKNADAVGLALELNQTLIDDRPINVERYSVKKLGAKQQR 336
>gi|401887270|gb|EJT51267.1| RNA binding protein [Trichosporon asahii var. asahii CBS 2479]
gi|406702339|gb|EKD05370.1| RNA binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 393
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 96 STSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG--QPKGFA 153
ST++TQ EV+ +YVGN+ +A T EV++HF G IL +F +P G+A
Sbjct: 22 STASTQP-TPEVEGYRVYVGNLAFAATEAEVREHFSKVGGEILSVILPTRFKSRRPAGYA 80
Query: 154 YVEFV-EIDAVQNALLLNETELHGRQLKVSAKRT 186
+V F E DA + LNETE+ R++++ R+
Sbjct: 81 FVTFKDEADANKAVETLNETEIGDRKIQLQVARS 114
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFV-EIDAVQNALL 168
S++V N+ +C PE+VQ FQ G V V + D G+P+GFA+VEF DA +
Sbjct: 36 SLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 95
Query: 169 LNETELHGRQLKVS 182
+N L GR++ V+
Sbjct: 96 MNRKMLSGREISVA 109
>gi|342874383|gb|EGU76397.1| hypothetical protein FOXB_13075 [Fusarium oxysporum Fo5176]
Length = 293
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y T E++ F S G V R ++ D G+PKGF + ++ + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITDIFSSAGKVERFRLVYDPETGRPKGFGFADYPDTDSASSAV 66
Query: 168 L-LNETELHGRQLKV 181
LN+ E+ GR+L+V
Sbjct: 67 RNLNDFEIMGRKLRV 81
>gi|358372661|dbj|GAA89263.1| C6 transcription factor [Aspergillus kawachii IFO 4308]
Length = 1068
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 36 DHDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSS 95
D ++E + ++E E + E+ R + E +AG+ R +Q + +E Q+
Sbjct: 801 DVNNERKPVEESEQREKTEEVEQSREEPSIRFIQTELKAGSQRPVQQEKPQEQEQEQEQE 860
Query: 96 STSA---TQAEKEEVDS-----RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 147
++ A T+A + + ++++GN+ Y T E++++ + G V +V ++ D G
Sbjct: 861 TSDAEKQTEARRRRLQEPPTPKETVFIGNIFYDVTREDLKKAMEKYGVVEKVVLVLDNRG 920
Query: 148 QPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRG 206
KG+ YV+F IDA Q A+ LN GR++ V + N+ +Q P + G
Sbjct: 921 ISKGYGYVQFDSIDAAQRAVDALNLRLFEGRRVTVQFAQNNVYHRRQLNA--PTRTLYIG 978
Query: 207 RRPF 210
PF
Sbjct: 979 NLPF 982
Score = 43.5 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
+R++Y+GN+ + T ++ + F+ V + + D+ GQ +GFA+ EFV + + A+
Sbjct: 972 TRTLYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAM 1031
Query: 168 LLNETEL-HGRQLKV 181
+ E +L +GR+L++
Sbjct: 1032 AVLENKLPYGRRLRL 1046
>gi|307718869|ref|YP_003874401.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
gi|306532594|gb|ADN02128.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
Length = 100
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S IYVGN++Y T + ++Q F+ G V V I+TD+ G KGF +VE +A + A+
Sbjct: 2 SFKIYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMSSEEAGEAAI 61
Query: 168 -LLNETELHGRQLKV 181
LN+ EL GRQL+V
Sbjct: 62 SALNQHELEGRQLRV 76
>gi|341882525|gb|EGT38460.1| hypothetical protein CAEBREN_15135 [Caenorhabditis brenneri]
Length = 84
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
S+YVGN Y + +E+ F + G V V I+ D+ G+P+GFA+VEF + Q A+
Sbjct: 7 SVYVGNAPYQTSEDEIGSFFSNVGHVTNVRIVCDRETGRPRGFAFVEFADEAGAQRAVNE 66
Query: 169 LNETELHGRQLKVS 182
LN + +GRQL+V+
Sbjct: 67 LNGADFNGRQLRVN 80
>gi|302696625|ref|XP_003037991.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
gi|300111688|gb|EFJ03089.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
Length = 449
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP------KGFAYVEFVEIDAVQ 164
S++VGN+ + T ++++ F+ G V R+ + T G+P KG+AYV+F +A
Sbjct: 101 SVWVGNMSFKTTQDDLRSFFKEAGEVTRINMPTKPSGRPGGSIENKGYAYVDFATPEAKA 160
Query: 165 NALLLNETELHGRQLKV 181
A+ L+E L GR+L +
Sbjct: 161 AAIALSEHPLIGRKLLI 177
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 92 QDSSSTSATQAEKEEVD--SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQ 148
+DS+ TS T+ D +RS++VGN+ Y E+++Q F G V + ++ D+ G+
Sbjct: 6 RDSTVTSTTKTAPSTTDRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGK 65
Query: 149 PKGFAYVEFVEIDAVQNALL-LNETELHGRQLKV 181
PKG+ + E+ + ++A+ LN EL+GR L+V
Sbjct: 66 PKGYGFCEYNDAQTAESAIRNLNGFELNGRPLRV 99
>gi|217966813|ref|YP_002352319.1| RNP-1 like RNA-binding protein [Dictyoglomus turgidum DSM 6724]
gi|217335912|gb|ACK41705.1| RNP-1 like RNA-binding protein [Dictyoglomus turgidum DSM 6724]
Length = 92
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
S+++YVGN+ ++ T EE++ F S GTV I++D+ G+ KGF +VE E +A +
Sbjct: 2 SKTLYVGNLPWSTTEEELKNIFASHGTVYSARIISDRNTGRSKGFGFVEVDEKEAEKMIS 61
Query: 168 LLNETELHGRQLKV 181
LN TE+ GR++ V
Sbjct: 62 ALNNTEVKGRRIIV 75
>gi|83643344|ref|YP_431779.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631387|gb|ABC27354.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 92
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
+IYVGN+ Y T +++++ F + G ++ V I+ D+ GQ KGF +VE + + A+
Sbjct: 2 NIYVGNLSYQVTEDDLREAFAAYGDISNVNIIRDRDTGQSKGFGFVEMSDNGQAEEAIQK 61
Query: 169 LNETELHGRQLKVSAKR 185
LNE+ L GR +KV+ R
Sbjct: 62 LNESNLKGRNMKVNEAR 78
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 91
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEIDAVQNAL-L 168
+IY+GN+ Y T +++++ F+S G V V I+TDK G+ +G A+VE D A+
Sbjct: 2 NIYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKDEGNAAIDG 61
Query: 169 LNETELHGRQLKVS 182
LN T++ GR++KV+
Sbjct: 62 LNGTQIRGREIKVN 75
>gi|195429806|ref|XP_002062948.1| GK21670 [Drosophila willistoni]
gi|194159033|gb|EDW73934.1| GK21670 [Drosophila willistoni]
Length = 255
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+YV N+++ T ++++ HF G+V + I + G GFA+VE ++++ QN L+
Sbjct: 121 LYVTNLNFETTKDDLELHFSRVGSVRSIRIPKKRRG---GFAFVEMNDLESFQNGFQLHN 177
Query: 172 TELHGRQLKV 181
TEL GR +KV
Sbjct: 178 TELQGRNIKV 187
>gi|83589429|ref|YP_429438.1| RNA-binding region RNP-1 [Moorella thermoacetica ATCC 39073]
gi|83572343|gb|ABC18895.1| RNA-binding region RNP-1 [Moorella thermoacetica ATCC 39073]
Length = 81
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL 168
R++YVGN+ +A + EE+ + F S G V I+TD+ G+ +GF +VE + DA Q
Sbjct: 2 RTLYVGNLPWATSEEELARAFASHGEVLSARIITDRQTGRSRGFGFVEVNDADADQMIAA 61
Query: 169 LNETELHGRQLKVSAKR 185
+N EL GR L V+ R
Sbjct: 62 MNGAELGGRILTVNEAR 78
>gi|341894331|gb|EGT50266.1| hypothetical protein CAEBREN_14285 [Caenorhabditis brenneri]
Length = 144
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAV 163
+E+D+R+I V N+D T +++++ F G + V ++ D + PKGFA+VEF + +V
Sbjct: 17 DEMDTRTIVVTNLDTTATEDDLRKLFDFAGPIKNVEVVFDTRTLMPKGFAFVEFEILLSV 76
Query: 164 QNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRRPFIPGVP 215
+ AL+ N+T R++ V K+ + + TF +PF+P P
Sbjct: 77 EVALIYNQTVFKNRRIGVKEKKASKTDSSVVGNSQKLTFT----KPFVPSHP 124
>gi|390331853|ref|XP_785806.3| PREDICTED: uncharacterized RNA-binding protein C365.04c-like
[Strongylocentrotus purpuratus]
Length = 206
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 39/171 (22%)
Query: 42 EHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQ 101
EH A+ +NEED +A S D + ++ VE E ++ + +
Sbjct: 24 EHQANQQNEEDNSAESTD------------------KTVKPPVEAESADTTETKGKKSGK 65
Query: 102 AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEI 160
K V ++VG + Y+ T E+V +HF + G + V + T K G+ +GF Y+EF
Sbjct: 66 KAKFYV----LFVGQIPYSATTEDVTKHFSTAGELKSVRLATHKDTGKSRGFGYIEFKNN 121
Query: 161 DAVQNALLLNETELHGRQLKV---------------SAKRTNIPGMKQFRG 196
+ L ++ + LHGR + V + KR N+ M +FRG
Sbjct: 122 KSYMRGLAMHLSMLHGRPINVEITSPGRGTSLIRKENLKRKNVE-MARFRG 171
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIY+GN+ Y T E+++ F G V+RV + TD+ G+P+GFA+VE +E +A + A +
Sbjct: 2 SIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVE-METEAQETAAIE 60
Query: 169 -LNETELHGRQLKVS 182
L+ E GR LKV+
Sbjct: 61 ALDGAEWMGRDLKVN 75
>gi|434398305|ref|YP_007132309.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428269402|gb|AFZ35343.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 96
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 13/101 (12%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+DY PE++ + F G+V RV TD+ G+ +GFA+VE +E +A ++A +
Sbjct: 2 SIYVGNLDYEIGPEDLTEVFAEYGSVKRVHFPTDRETGRKRGFAFVE-METEAEEDAAIA 60
Query: 169 -LNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGRR 208
L+ E R+LKV+ R N+FG GRR
Sbjct: 61 KLDGAEWMDRELKVNKARPR---------ENKNSFGGGGRR 92
>gi|359472731|ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
Length = 664
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 105 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQ 164
E S++++VGN+ ++ E+V+ F+ G V V +D G+ KGF +VEF +A Q
Sbjct: 397 ESTGSKTLFVGNLSFSVQKEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQ 456
Query: 165 NALLLNETELHGRQLKVSAKR 185
AL +N +L GR +++ R
Sbjct: 457 KALKMNGKDLLGRAVRLDLAR 477
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 78 REMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEV----QQHFQSC 133
R ++ + +E GA S + +K +++I+V D + ++V +++F SC
Sbjct: 469 RAVRLDLARERGAYTPYSGKESNSFQKGGSQAQTIFVRGFDKSGDEDQVRSTLEEYFGSC 528
Query: 134 GTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 181
G ++R++I D + G KG AY++F + D+ AL LN TEL G L V
Sbjct: 529 GDISRISIPKDYESGSVKGIAYMDFTDGDSFNKALELNGTELGGYTLNV 577
>gi|336464258|gb|EGO52498.1| hypothetical protein NEUTE1DRAFT_72168 [Neurospora tetrasperma FGSC
2508]
Length = 321
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y T E++ + F G V ++ D+ G+PKGF + EF + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAV 66
Query: 168 L-LNETELHGRQLKV 181
LN+ E+ GR+L+V
Sbjct: 67 RNLNDHEIMGRKLRV 81
>gi|313143724|ref|ZP_07805917.1| RNA-binding protein RNP-1 [Helicobacter cinaedi CCUG 18818]
gi|313128755|gb|EFR46372.1| RNA-binding protein RNP-1 [Helicobacter cinaedi CCUG 18818]
Length = 91
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 107 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQN 165
V +++YVGN+ YA T +E+++ F G V V ++ D+ G+PKGF +VE + A++
Sbjct: 9 VPLKTLYVGNLVYAVTQDELRELFSQFGEVFSVKLINDRESGRPKGFGFVEMEDNAALKA 68
Query: 166 ALLLNETELHGRQLKVSAKR 185
LNE + GR L+V+ R
Sbjct: 69 IEALNEKDFRGRNLRVNEAR 88
>gi|410626020|ref|ZP_11336790.1| RNA-binding protein [Glaciecola mesophila KMM 241]
gi|410154640|dbj|GAC23559.1| RNA-binding protein [Glaciecola mesophila KMM 241]
Length = 151
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 95 SSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFA 153
S TS+ + +E +S+++YVGN+ Y + VQQHF+ G V+ V ++ D + G+ KG+
Sbjct: 55 SGTSSVAQQADEENSKTLYVGNLPYRANEQAVQQHFELQGQVHSVRLMKDRRTGKRKGYG 114
Query: 154 YVEFVEI---DAVQNALLLNETELHGRQLKV 181
+VE A+QN LN++E R LKV
Sbjct: 115 FVEMTAAGAEKAIQN---LNDSEFQERTLKV 142
>gi|452845187|gb|EME47120.1| hypothetical protein DOTSEDRAFT_145507 [Dothistroma septosporum
NZE10]
Length = 571
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG-QPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+DY T +++ + C +V V I+ DK +PKGF YVEF + + AL
Sbjct: 106 TAHLGNLDYNVTSVDIEGFLEGC-SVTTVRIMEDKIDRKPKGFGYVEFANPEGLTKALSK 164
Query: 170 NETELHGRQLKVS 182
+E+ GR +K+S
Sbjct: 165 SESSFMGRNIKIS 177
>gi|342879218|gb|EGU80475.1| hypothetical protein FOXB_09032 [Fusarium oxysporum Fo5176]
Length = 554
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALLL 169
+ ++GN+ Y T + V ++ CG VN V ++ D+ +PKGF YVEF +D ++ AL
Sbjct: 81 TAHLGNLSYDVTNDAVGEYLADCGVVN-VRLIEDRELQRPKGFGYVEFETLDGLKKALTF 139
Query: 170 NETELHGRQLKV 181
+ +GR +K+
Sbjct: 140 DGENFNGRMIKI 151
>gi|449018258|dbj|BAM81660.1| similar to nucleolar RNA-binding protein [Cyanidioschyzon merolae
strain 10D]
Length = 406
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALLL 169
SI++GNV + EE++ F CG + V I+ D + G KGFAYV F + AL
Sbjct: 185 SIFIGNVPFTANEEEIRSVFSDCGAILNVRIVRDAQTGMGKGFAYVTFAPEANMDLALSR 244
Query: 170 NET-ELHGRQLKV 181
+ET +LHGR L+V
Sbjct: 245 HETVQLHGRLLRV 257
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
Length = 95
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL- 168
SIYVGN+DY+ T +++ + F GTV RV + TD+ G+ +GF +VE NA+
Sbjct: 2 SIYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEMASETEESNAISE 61
Query: 169 LNETELHGRQLKVSAKR 185
L+ E GR+LKV+ R
Sbjct: 62 LDGAEWMGRELKVNPAR 78
>gi|195155051|ref|XP_002018420.1| GL16773 [Drosophila persimilis]
gi|194114216|gb|EDW36259.1| GL16773 [Drosophila persimilis]
Length = 251
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+YV N+++ T +++++HF++ G V + I + G GFA+VE +++ + Q L+
Sbjct: 118 LYVTNLNFETTKDDLERHFEAIGLVKSIRIPKKRRG---GFAFVEMMDLASFQRGFELHN 174
Query: 172 TELHGRQLKV 181
TEL GR++KV
Sbjct: 175 TELQGRRIKV 184
>gi|440293229|gb|ELP86372.1| 28 kDa ribonucleoprotein, putative [Entamoeba invadens IP1]
Length = 315
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+YVGN+ Y+ T + ++ HF+S G + ++T + G KGFA+VE+ D + A+ N
Sbjct: 4 LYVGNLSYSTTEDSLKTHFESFGKIKECHLITFR-GYSKGFAFVEYENTDDAKKAISSNG 62
Query: 172 TELHGRQLKV 181
E GR+L+V
Sbjct: 63 VEFDGRKLRV 72
>gi|389751225|gb|EIM92298.1| hypothetical protein STEHIDRAFT_89201 [Stereum hirsutum FP-91666
SS1]
Length = 340
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQP-------KGFAYVEFVEIDAVQ 164
++VGN+ Y + E +QQHF C + +L+ K +P KG A++EF +A+Q
Sbjct: 159 LFVGNLKYTTSKEAIQQHFAICDPPPTIRLLSPKQTRPGAPTAKSKGCAFLEFTSRNALQ 218
Query: 165 NALLLNETELHGRQLKV 181
AL L+ +EL R++ V
Sbjct: 219 QALKLHHSELESRKINV 235
>gi|125809709|ref|XP_001361217.1| GA17545 [Drosophila pseudoobscura pseudoobscura]
gi|54636392|gb|EAL25795.1| GA17545 [Drosophila pseudoobscura pseudoobscura]
Length = 251
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNE 171
+YV N+++ T +++++HF++ G V + I + G GFA+VE +++ + Q L+
Sbjct: 118 LYVTNLNFETTKDDLERHFEAIGLVKSIRIPKKRRG---GFAFVEMMDLASFQRGFELHN 174
Query: 172 TELHGRQLKV 181
TEL GR++KV
Sbjct: 175 TELQGRRIKV 184
>gi|164427135|ref|XP_964488.2| hypothetical protein NCU03311 [Neurospora crassa OR74A]
gi|157071622|gb|EAA35252.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 322
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 109 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL 167
SR ++VGN+ Y T E++ + F G V ++ D+ G+PKGF + EF + D+ +A+
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAV 66
Query: 168 L-LNETELHGRQLKV 181
LN+ E+ GR+L+V
Sbjct: 67 RNLNDHEIMGRKLRV 81
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 106 EVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQ 164
E RS++VGN+ Y T + ++ F G V + ++ D+ G+PKG+ ++EF +I
Sbjct: 13 ERSQRSVFVGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEFPDIQTAD 72
Query: 165 NAL-LLNETELHGRQLKV 181
A+ +LN EL GR L+V
Sbjct: 73 TAIRVLNGHELGGRILRV 90
>gi|328785951|ref|XP_003250682.1| PREDICTED: hypothetical protein LOC411091 [Apis mellifera]
Length = 642
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
+SI++GN+ Y + +HF+ CG + V ++ D K G KGF YV F DAV AL
Sbjct: 461 KSIFLGNLHYNIDDNTIIKHFKQCGEIESVRVIRDNKTGVGKGFGYVNFKNEDAVTLALE 520
Query: 169 LNETELHGRQLKV 181
L+ T + R+++V
Sbjct: 521 LDGTTISNREVRV 533
>gi|17508587|ref|NP_493023.1| Protein R09B3.3 [Caenorhabditis elegans]
gi|3879016|emb|CAB03237.1| Protein R09B3.3 [Caenorhabditis elegans]
Length = 85
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 111 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNAL-L 168
S+YVGN + T +++ +F G V+ V I+ D+ G+P+GFA+VEF E A Q A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 169 LNETELHGRQLKVS 182
N + +GR L+V+
Sbjct: 65 FNGVDFNGRALRVN 78
>gi|219111803|ref|XP_002177653.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410538|gb|EEC50467.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 76
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 112 IYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEIDAVQNALL-L 169
++VGN+ + T E++QQ F G V V ++TD G+P+GFA+VEF + A +A+ +
Sbjct: 1 VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEFSDAQAALSAIRNM 60
Query: 170 NETELHGRQLKVS 182
N+ EL+GR+++V+
Sbjct: 61 NDYELNGRRIRVN 73
>gi|340714141|ref|XP_003395590.1| PREDICTED: hypothetical protein LOC100644519 [Bombus terrestris]
Length = 628
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 110 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEIDAVQNALL 168
+S+++GN+ + + V+ HF+ CG + V I+ D + G KGF YV F DAV AL
Sbjct: 445 KSVFIGNLHFNVDDDSVRNHFKRCGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALE 504
Query: 169 LNETELHGRQLKVSAKRTNIPGMKQFRGR 197
L+ T + R+++V + NI K+ +G+
Sbjct: 505 LDGTTILNREVRV---KPNIDQDKRTKGK 530
>gi|393903982|gb|EFO15894.2| cleavage stimulation factor [Loa loa]
Length = 337
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 92 QDSSSTSATQAEKEEVD--SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQ 148
+DS+ TS T+ D +RS++VGN+ Y E+++Q F G V + ++ D+ G+
Sbjct: 6 RDSAVTSTTKTAPSATDRSARSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGK 65
Query: 149 PKGFAYVEFVEIDAVQNALL-LNETELHGRQLKV 181
PKG+ + E+ + ++A+ LN EL+GR L+V
Sbjct: 66 PKGYGFCEYNDAQTAESAIRNLNGFELNGRPLRV 99
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,722,999,473
Number of Sequences: 23463169
Number of extensions: 159344305
Number of successful extensions: 1862700
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9680
Number of HSP's successfully gapped in prelim test: 19022
Number of HSP's that attempted gapping in prelim test: 1560106
Number of HSP's gapped (non-prelim): 188846
length of query: 222
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 85
effective length of database: 9,144,741,214
effective search space: 777303003190
effective search space used: 777303003190
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 74 (33.1 bits)