BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027516
(222 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Okadaic Acid
pdb|2NPP|C Chain C, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|F Chain F, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|3DW8|C Chain C, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3DW8|F Chain F, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3K7V|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-1
pdb|3K7W|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-2
Length = 309
Score = 309 bits (792), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 173/217 (79%)
Query: 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKL 61
+LDQWI ++ E + L E +++ LCE KEIL +ESNVQ V PVTVCGD+HGQFHDLM+L
Sbjct: 9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMEL 68
Query: 62 FQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121
F+ GG P+TNY+FMGD+VDRGY S+E T+L+ LK RY IT+LRGNHESRQ+TQVYG
Sbjct: 69 FRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 128
Query: 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 181
FYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R E
Sbjct: 129 FYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQE 188
Query: 182 IPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVT 218
+PHEGP CDL+WSDP+D W +SPRGAG+ FG ++
Sbjct: 189 VPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDIS 225
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 293
Score = 309 bits (792), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 173/217 (79%)
Query: 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKL 61
+LDQWI ++ E + L E +++ LCE KEIL +ESNVQ V PVTVCGD+HGQFHDLM+L
Sbjct: 8 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMEL 67
Query: 62 FQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121
F+ GG P+TNY+FMGD+VDRGY S+E T+L+ LK RY IT+LRGNHESRQ+TQVYG
Sbjct: 68 FRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 127
Query: 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 181
FYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R E
Sbjct: 128 FYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQE 187
Query: 182 IPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVT 218
+PHEGP CDL+WSDP+D W +SPRGAG+ FG ++
Sbjct: 188 VPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDIS 224
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Tumor- Inducing Toxins
Length = 309
Score = 309 bits (792), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 173/217 (79%)
Query: 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKL 61
+LDQWI ++ E + L E +++ LCE KEIL +ESNVQ V PVTVCGD+HGQFHDLM+L
Sbjct: 9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMEL 68
Query: 62 FQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121
F+ GG P+TNY+FMGD+VDRGY S+E T+L+ LK RY IT+LRGNHESRQ+TQVYG
Sbjct: 69 FRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 128
Query: 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 181
FYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R E
Sbjct: 129 FYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQE 188
Query: 182 IPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVT 218
+PHEGP CDL+WSDP+D W +SPRGAG+ FG ++
Sbjct: 189 VPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDIS 225
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 309 bits (791), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 173/217 (79%)
Query: 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKL 61
+LDQWI ++ E + L E +++ LCE KEIL +ESNVQ V PVTVCGD+HGQFHDLM+L
Sbjct: 10 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMEL 69
Query: 62 FQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121
F+ GG P+TNY+FMGD+VDRGY S+E T+L+ LK RY IT+LRGNHESRQ+TQVYG
Sbjct: 70 FRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 129
Query: 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 181
FYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R E
Sbjct: 130 FYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQE 189
Query: 182 IPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVT 218
+PHEGP CDL+WSDP+D W +SPRGAG+ FG ++
Sbjct: 190 VPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDIS 226
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a
Length = 304
Score = 309 bits (791), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 173/217 (79%)
Query: 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKL 61
+LDQWI ++ E + L E +++ LCE KEIL +ESNVQ V PVTVCGD+HGQFHDLM+L
Sbjct: 9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMEL 68
Query: 62 FQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121
F+ GG P+TNY+FMGD+VDRGY S+E T+L+ LK RY IT+LRGNHESRQ+TQVYG
Sbjct: 69 FRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 128
Query: 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 181
FYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R E
Sbjct: 129 FYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQE 188
Query: 182 IPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVT 218
+PHEGP CDL+WSDP+D W +SPRGAG+ FG ++
Sbjct: 189 VPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDIS 225
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction
Length = 309
Score = 308 bits (788), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 173/217 (79%)
Query: 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKL 61
+LDQWI ++ E + L E +++ LCE KEIL +ESNVQ V PVTVCGD+HGQFHDLM+L
Sbjct: 9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMEL 68
Query: 62 FQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121
F+ GG P+TNY+FMGD+V+RGY S+E T+L+ LK RY IT+LRGNHESRQ+TQVYG
Sbjct: 69 FRIGGKSPDTNYLFMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 128
Query: 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 181
FYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R E
Sbjct: 129 FYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQE 188
Query: 182 IPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVT 218
+PHEGP CDL+WSDP+D W +SPRGAG+ FG ++
Sbjct: 189 VPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDIS 225
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|F Chain F, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 309
Score = 307 bits (787), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 173/217 (79%)
Query: 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKL 61
+LDQWI ++ E + L E +++ LCE KEIL +ESNVQ V PVTVCGD+HGQFHDLM+L
Sbjct: 9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMEL 68
Query: 62 FQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121
F+ GG P+TNY+FMGD+V+RGY S+E T+L+ LK RY IT+LRGNHESRQ+TQVYG
Sbjct: 69 FRIGGKSPDTNYLFMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 128
Query: 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 181
FYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R E
Sbjct: 129 FYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQE 188
Query: 182 IPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVT 218
+PHEGP CDL+WSDP+D W +SPRGAG+ FG ++
Sbjct: 189 VPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDIS 225
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
pdb|4G9J|B Chain B, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
Length = 331
Score = 220 bits (560), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 155/231 (67%), Gaps = 10/231 (4%)
Query: 1 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIH 52
++LD I ++ E Q L E+E++ LC +EI + + + + +P+ +CGDIH
Sbjct: 8 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 67
Query: 53 GQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHE 112
GQ++DL++LF+ GG PE+NY+F+GD+VDRG SLE +LL K +YP N LLRGNHE
Sbjct: 68 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 127
Query: 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQ 172
+ ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D + C HGGLSPD+++++Q
Sbjct: 128 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 186
Query: 173 IRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEVM 222
IR I R ++P +G CDL+WSDP+ D++ W + RG + FG+ V ++ +
Sbjct: 187 IRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFL 237
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
pdb|1FJM|B Chain B, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
Length = 330
Score = 220 bits (560), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 155/231 (67%), Gaps = 10/231 (4%)
Query: 1 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIH 52
++LD I ++ E Q L E+E++ LC +EI + + + + +P+ +CGDIH
Sbjct: 7 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 66
Query: 53 GQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHE 112
GQ++DL++LF+ GG PE+NY+F+GD+VDRG SLE +LL K +YP N LLRGNHE
Sbjct: 67 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 126
Query: 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQ 172
+ ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D + C HGGLSPD+++++Q
Sbjct: 127 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 185
Query: 173 IRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEVM 222
IR I R ++P +G CDL+WSDP+ D++ W + RG + FG+ V ++ +
Sbjct: 186 IRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFL 236
>pdb|3N5U|A Chain A, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
pdb|3N5U|B Chain B, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
Length = 300
Score = 220 bits (560), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 155/231 (67%), Gaps = 10/231 (4%)
Query: 1 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIH 52
++LD I ++ E Q L E+E++ LC +EI + + + + +P+ +CGDIH
Sbjct: 7 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 66
Query: 53 GQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHE 112
GQ++DL++LF+ GG PE+NY+F+GD+VDRG SLE +LL K +YP N LLRGNHE
Sbjct: 67 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 126
Query: 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQ 172
+ ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D + C HGGLSPD+++++Q
Sbjct: 127 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 185
Query: 173 IRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEVM 222
IR I R ++P +G CDL+WSDP+ D++ W + RG + FG+ V ++ +
Sbjct: 186 IRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFL 236
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7A|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7B|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
pdb|3E7B|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
Length = 299
Score = 219 bits (559), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 155/231 (67%), Gaps = 10/231 (4%)
Query: 1 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIH 52
++LD I ++ E Q L E+E++ LC +EI + + + + +P+ +CGDIH
Sbjct: 6 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 65
Query: 53 GQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHE 112
GQ++DL++LF+ GG PE+NY+F+GD+VDRG SLE +LL K +YP N LLRGNHE
Sbjct: 66 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
Query: 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQ 172
+ ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D + C HGGLSPD+++++Q
Sbjct: 126 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 184
Query: 173 IRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEVM 222
IR I R ++P +G CDL+WSDP+ D++ W + RG + FG+ V ++ +
Sbjct: 185 IRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFL 235
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|C Chain C, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|E Chain E, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|G Chain G, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
Length = 306
Score = 219 bits (559), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 155/231 (67%), Gaps = 10/231 (4%)
Query: 1 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIH 52
++LD I ++ E Q L E+E++ LC +EI + + + + +P+ +CGDIH
Sbjct: 6 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 65
Query: 53 GQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHE 112
GQ++DL++LF+ GG PE+NY+F+GD+VDRG SLE +LL K +YP N LLRGNHE
Sbjct: 66 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
Query: 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQ 172
+ ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D + C HGGLSPD+++++Q
Sbjct: 126 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 184
Query: 173 IRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEVM 222
IR I R ++P +G CDL+WSDP+ D++ W + RG + FG+ V ++ +
Sbjct: 185 IRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFL 235
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGG|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGH|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3EGH|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3HVQ|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
pdb|3HVQ|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
Length = 329
Score = 219 bits (558), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 155/231 (67%), Gaps = 10/231 (4%)
Query: 1 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIH 52
++LD I ++ E Q L E+E++ LC +EI + + + + +P+ +CGDIH
Sbjct: 6 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 65
Query: 53 GQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHE 112
GQ++DL++LF+ GG PE+NY+F+GD+VDRG SLE +LL K +YP N LLRGNHE
Sbjct: 66 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125
Query: 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQ 172
+ ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D + C HGGLSPD+++++Q
Sbjct: 126 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 184
Query: 173 IRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEVM 222
IR I R ++P +G CDL+WSDP+ D++ W + RG + FG+ V ++ +
Sbjct: 185 IRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFL 235
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8A|B Chain B, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8G|A Chain A, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
pdb|2O8G|B Chain B, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
Length = 329
Score = 217 bits (552), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 148/216 (68%), Gaps = 2/216 (0%)
Query: 8 AKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGH 67
+K + L E+E++ LC +EI + + + + +P+ +CGDIHGQ++DL++LF+ GG
Sbjct: 28 SKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGF 87
Query: 68 VPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQ 127
PE+NY+F+GD+VDRG SLE +LL K +YP N LLRGNHE + ++YGFYDEC+
Sbjct: 88 PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 147
Query: 128 RKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGP 187
R+Y N W+ TD F+ L ++AI+D + C HGGLSPD+++++QIR I R ++P +G
Sbjct: 148 RRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL 206
Query: 188 FCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEVM 222
CDL+WSDP+ D+ W + RG + FG+ V ++ +
Sbjct: 207 LCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFL 242
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound
To Protein Phosphatase-1
pdb|1IT6|A Chain A, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|1IT6|B Chain B, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|2BCD|A Chain A, X-Ray Crystal Structure Of Protein Phosphatase-1 With The
Marine Toxin Motuporin Bound
pdb|2BDX|A Chain A, X-Ray Crystal Structure Of Dihydromicrocystin-La Bound To
Protein Phosphatase-1
Length = 323
Score = 216 bits (551), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 148/216 (68%), Gaps = 2/216 (0%)
Query: 8 AKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGH 67
+K + L E+E++ LC +EI + + + + +P+ +CGDIHGQ++DL++LF+ GG
Sbjct: 22 SKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGF 81
Query: 68 VPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQ 127
PE+NY+F+GD+VDRG SLE +LL K +YP N LLRGNHE + ++YGFYDEC+
Sbjct: 82 PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 141
Query: 128 RKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGP 187
R+Y N W+ TD F+ L ++AI+D + C HGGLSPD+++++QIR I R ++P +G
Sbjct: 142 RRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL 200
Query: 188 FCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEVM 222
CDL+WSDP+ D+ W + RG + FG+ V ++ +
Sbjct: 201 LCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFL 236
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin
Hybrid Bound To Okadaic Acid
Length = 293
Score = 216 bits (551), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 148/216 (68%), Gaps = 2/216 (0%)
Query: 8 AKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGH 67
+K + L E+E++ LC +EI + + + + +P+ +CGDIHGQ++DL++LF+ GG
Sbjct: 17 SKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGF 76
Query: 68 VPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQ 127
PE+NY+F+GD+VDRG SLE +LL K +YP N LLRGNHE + ++YGFYDEC+
Sbjct: 77 PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 136
Query: 128 RKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGP 187
R+Y N W+ TD F+ L ++AI+D + C HGGLSPD+++++QIR I R ++P +G
Sbjct: 137 RRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGL 195
Query: 188 FCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEVM 222
CDL+WSDP+ D+ W + RG + FG+ V ++ +
Sbjct: 196 LCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFL 231
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 330
Score = 212 bits (539), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 142/209 (67%), Gaps = 2/209 (0%)
Query: 15 HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYI 74
+ E E++ LC +EI + + + + +P+ +CGDIHGQ+ DL++LF+ GG PE NY+
Sbjct: 31 QMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYL 90
Query: 75 FMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNAN 134
F+GD+VDRG SLE +LL K +YP N LLRGNHE + ++YGFYDEC+R++ N
Sbjct: 91 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NIK 149
Query: 135 AWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWS 194
W+ TD F+ L ++AI+D + C HGGLSPD+++++QIR I R ++P G CDL+WS
Sbjct: 150 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWS 209
Query: 195 DPE-DIETWAVSPRGAGWLFGSRVTSEVM 222
DP+ D++ W + RG + FG+ V S+ +
Sbjct: 210 DPDKDVQGWGENDRGVSFTFGADVVSKFL 238
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer
Length = 521
Score = 187 bits (474), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
Query: 10 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP 69
+KEG+ L+++ E IL +E N+ +++PVTVCGDIHGQF DLMKLF+ GG
Sbjct: 51 MKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPA 109
Query: 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 129
T Y+F+GD+VDRGY S+E L LK YP + LLRGNHE R LT+ + F EC+ K
Sbjct: 110 NTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 169
Query: 130 YGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFC 189
Y + + C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP C
Sbjct: 170 Y-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMC 228
Query: 190 DLMWSDP 196
D++WSDP
Sbjct: 229 DILWSDP 235
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|C Chain C, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 383
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 123/187 (65%), Gaps = 2/187 (1%)
Query: 10 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP 69
+KEG+ L+++ E IL +E N+ +++PVTVCGDIHGQF DLMKLF+ GG
Sbjct: 54 MKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPA 112
Query: 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 129
T Y+F+GD+VDRGY S+E L LK YP + LLRGNHE R LT+ + F EC+ K
Sbjct: 113 NTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 172
Query: 130 YGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFC 189
Y + C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP C
Sbjct: 173 YSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMC 231
Query: 190 DLMWSDP 196
D++WSDP
Sbjct: 232 DILWSDP 238
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|E Chain E, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 372
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 123/187 (65%), Gaps = 2/187 (1%)
Query: 10 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP 69
+KEG+ L+++ E IL +E N+ +++PVTVCGDIHGQF DLMKLF+ GG
Sbjct: 51 MKEGRLEESVALRIITEGA-SILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPA 109
Query: 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 129
T Y+F+GD+VDRGY S+E L LK YP + LLRGNHE R LT+ + F EC+ K
Sbjct: 110 NTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 169
Query: 130 YGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFC 189
Y + C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP C
Sbjct: 170 YSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMC 228
Query: 190 DLMWSDP 196
D++WSDP
Sbjct: 229 DILWSDP 235
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 373
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 123/187 (65%), Gaps = 2/187 (1%)
Query: 10 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP 69
+KEG+ L+++ E IL +E N+ +++PVTVCGDIHGQF DLMKLF+ GG
Sbjct: 32 MKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPA 90
Query: 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 129
T Y+F+GD+VDRGY S+E L LK YP + LLRGNHE R LT+ + F EC+ K
Sbjct: 91 NTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 150
Query: 130 YGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFC 189
Y + C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP C
Sbjct: 151 YSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMC 209
Query: 190 DLMWSDP 196
D++WSDP
Sbjct: 210 DILWSDP 216
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|C Chain C, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 357
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 123/187 (65%), Gaps = 2/187 (1%)
Query: 10 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP 69
+KEG+ L+++ E IL +E N+ +++PVTVCGDIHGQF DLMKLF+ GG
Sbjct: 38 MKEGRLEESVALRIITEGA-SILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPA 96
Query: 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 129
T Y+F+GD+VDRGY S+E L LK YP + LLRGNHE R LT+ + F EC+ K
Sbjct: 97 NTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 156
Query: 130 YGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFC 189
Y + C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP C
Sbjct: 157 YSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMC 215
Query: 190 DLMWSDP 196
D++WSDP
Sbjct: 216 DILWSDP 222
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 375
Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 123/187 (65%), Gaps = 2/187 (1%)
Query: 10 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP 69
+KEG+ L+++ E IL +E N+ +++PVTVCGDIHGQF DLMKLF+ GG
Sbjct: 34 MKEGRLEETVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPA 92
Query: 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 129
T Y+F+GD+VDRGY S+E L LK YP + LLRGNHE R LT+ + F EC+ K
Sbjct: 93 NTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 152
Query: 130 YGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFC 189
Y + C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP C
Sbjct: 153 YSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMC 211
Query: 190 DLMWSDP 196
D++WSDP
Sbjct: 212 DILWSDP 218
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex
Length = 327
Score = 185 bits (469), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 123/187 (65%), Gaps = 2/187 (1%)
Query: 10 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP 69
+KEG+ L+++ E IL +E N+ +++PVTVCGDIHGQF DLMKLF+ GG
Sbjct: 31 MKEGRLEESVALRIITEGA-SILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPA 89
Query: 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRK 129
T Y+F+GD+VDRGY S+E L LK YP + LLRGNHE R LT+ + F EC+ K
Sbjct: 90 NTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 149
Query: 130 YGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFC 189
Y + C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP C
Sbjct: 150 YSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMC 208
Query: 190 DLMWSDP 196
D++WSDP
Sbjct: 209 DILWSDP 215
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 126/216 (58%), Gaps = 12/216 (5%)
Query: 18 EDELQLLCEY-----VKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHV 68
+ +L C Y VKE+L + S + +TVCGD HGQF+DL+ +F+ G
Sbjct: 179 QKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLP 238
Query: 69 PETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQ 127
ETN YIF GDFVDRG S+EV L K YP + LLRGNHE+ + Q+YGF E +
Sbjct: 239 SETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVK 298
Query: 128 RKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGL-SPDIRTIDQIRVIERNCEIPHEG 186
KY A + ++VF++L L+ I+G VL +HGGL S D T+D IR IERN + P G
Sbjct: 299 AKY-TAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG 357
Query: 187 PFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEVM 222
P CDL+WSDP+ ++S RG FG VT +
Sbjct: 358 PMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFL 393
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
pdb|1S95|B Chain B, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
Length = 333
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 126/216 (58%), Gaps = 12/216 (5%)
Query: 18 EDELQLLCEY-----VKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHV 68
+ +L C Y VKE+L + S + +TVCGD HGQF+DL+ +F+ G
Sbjct: 35 QKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLP 94
Query: 69 PETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQ 127
ETN YIF GDFVDRG S+EV L K YP + LLRGNHE+ + Q+YGF E +
Sbjct: 95 SETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVK 154
Query: 128 RKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGL-SPDIRTIDQIRVIERNCEIPHEG 186
KY A + ++VF++L L+ I+G VL +HGGL S D T+D IR IERN + P G
Sbjct: 155 AKY-TAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG 213
Query: 187 PFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEVM 222
P CDL+WSDP+ ++S RG FG VT +
Sbjct: 214 PMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFL 249
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H60|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H61|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H61|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H62|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H62|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H63|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H63|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H64|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H64|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H66|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H66|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H67|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H67|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H68|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H68|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H69|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
pdb|3H69|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
Length = 315
Score = 166 bits (421), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 126/216 (58%), Gaps = 12/216 (5%)
Query: 18 EDELQLLCEY-----VKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHV 68
+ +L C Y VKE+L + S + +TVCGD HGQF+DL+ +F+ G
Sbjct: 26 QKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLP 85
Query: 69 PETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQ 127
ETN YIF GDFVDRG S+EV L K YP + LLRGNHE+ + Q+YGF E +
Sbjct: 86 SETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVK 145
Query: 128 RKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGL-SPDIRTIDQIRVIERNCEIPHEG 186
KY A + ++VF++L L+ I+G VL +HGGL S D T+D IR IERN + P G
Sbjct: 146 AKY-TAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG 204
Query: 187 PFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEVM 222
P CDL+WSDP+ ++S RG FG VT +
Sbjct: 205 PMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFL 240
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
pdb|3ICF|B Chain B, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
Length = 335
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 108/190 (56%), Gaps = 4/190 (2%)
Query: 35 ESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTIL 93
E+N P + ++VCGD HGQF+D++ LF+ G V P+ Y+F GDFVDRG S EV +
Sbjct: 57 ENNSTP-DVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLF 115
Query: 94 LLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIID 153
LK +P N L RGNHES ++YGF DEC+ KY + + F+ L L+ +I+
Sbjct: 116 YCLKILHPNNFFLNRGNHESDNXNKIYGFEDECKYKY-SQRIFNXFAQSFESLPLATLIN 174
Query: 154 GTVLCVHGGLSPDIR-TIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWL 212
L HGGL D T+ + I+R + P +G F +L+W+DP++ S RG G
Sbjct: 175 NDYLVXHGGLPSDPSATLSDFKNIDRFAQPPRDGAFXELLWADPQEANGXGPSQRGLGHA 234
Query: 213 FGSRVTSEVM 222
FG +T +
Sbjct: 235 FGPDITDRFL 244
>pdb|1G5B|A Chain A, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|B Chain B, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|C Chain C, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
Length = 221
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 45 VTVCGDIHGQFHDLMKLFQTGGHVPETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPAN 103
+ V GD+HG + +LM T G + + I +GD VDRG ++E ++ R
Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITFPWFR---- 70
Query: 104 ITLLRGNHESRQLTQVYGFYDECQRKYGNANAW 136
+RGNHE + + + GN N W
Sbjct: 71 --AVRGNHEQMMIDGL--------SERGNVNHW 93
>pdb|4ADG|A Chain A, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form Ii)
pdb|4ADG|B Chain B, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form Ii)
pdb|4ADG|C Chain C, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form Ii)
pdb|4ADI|A Chain A, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form I)
pdb|4ADI|B Chain B, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form I)
pdb|4ADI|C Chain C, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form I)
pdb|4ADJ|A Chain A, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 1mm Of
Calcium Acetate
pdb|4ADJ|B Chain B, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 1mm Of
Calcium Acetate
pdb|4ADJ|C Chain C, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 1mm Of
Calcium Acetate
pdb|4B3V|A Chain A, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 20mm Of
Calcium Acetate
pdb|4B3V|B Chain B, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 20mm Of
Calcium Acetate
pdb|4B3V|C Chain C, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 20mm Of
Calcium Acetate
Length = 473
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 125 ECQRKYGNANA--WRYCTD-VFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 181
E + +G+++A W + TD V L++ + V + RT+ Q+ V +C
Sbjct: 118 EVEPAFGHSDAACWGFPTDTVMSVFALASYVQHPHKTVRVKFHTETRTVWQLSVAGVSCN 177
Query: 182 IPHEGPFCD 190
+ E PFC+
Sbjct: 178 VTTEHPFCN 186
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 157 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 216
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 217 VTSEV 221
+T V
Sbjct: 200 LTEIV 204
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 157 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 216
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 141 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 200
Query: 217 VTSEV 221
+T V
Sbjct: 201 LTEIV 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 157 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 216
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 142 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 201
Query: 217 VTSEV 221
+T V
Sbjct: 202 LTEIV 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 157 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 216
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 217 VTSEV 221
+T V
Sbjct: 200 LTEIV 204
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 157 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 216
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 208
Query: 217 VTSEV 221
+T V
Sbjct: 209 LTEIV 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 157 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 216
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 217 VTSEV 221
+T V
Sbjct: 206 LTEIV 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 157 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 216
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 148 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 207
Query: 217 VTSEV 221
+T V
Sbjct: 208 LTEIV 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.141 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,527,351
Number of Sequences: 62578
Number of extensions: 324397
Number of successful extensions: 707
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 633
Number of HSP's gapped (non-prelim): 40
length of query: 222
length of database: 14,973,337
effective HSP length: 95
effective length of query: 127
effective length of database: 9,028,427
effective search space: 1146610229
effective search space used: 1146610229
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)